RG43_RS02800 e900d4236746abfdd6436dab2615ca4b 312 SUPERFAMILY SSF51735 1 145 3.51E-39 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS02800 e900d4236746abfdd6436dab2615ca4b 312 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 61.568 T 09-03-2017 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 RG43_RS02800 e900d4236746abfdd6436dab2615ca4b 312 Gene3D G3DSA:3.40.50.720 1 146 1.3E-57 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS02800 e900d4236746abfdd6436dab2615ca4b 312 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 311 1.2E-140 T 09-03-2017 IPR010097 Malate dehydrogenase, type 1 GO:0006108|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 RG43_RS02800 e900d4236746abfdd6436dab2615ca4b 312 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 6.6E-46 T 09-03-2017 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 RG43_RS02800 e900d4236746abfdd6436dab2615ca4b 312 SUPERFAMILY SSF56327 146 311 2.16E-42 T 09-03-2017 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 RG43_RS02800 e900d4236746abfdd6436dab2615ca4b 312 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 09-03-2017 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 RG43_RS02800 e900d4236746abfdd6436dab2615ca4b 312 Gene3D G3DSA:3.90.110.10 147 311 6.9E-64 T 09-03-2017 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 RG43_RS02800 e900d4236746abfdd6436dab2615ca4b 312 PIRSF PIRSF000102 1 310 6.7E-60 T 09-03-2017 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RG43_RS02800 e900d4236746abfdd6436dab2615ca4b 312 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 310 1.9E-52 T 09-03-2017 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 RG43_RS21400 ce1ab0c41ce9e971e7c1e238b0808340 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.3E-63 T 09-03-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 RG43_RS21400 ce1ab0c41ce9e971e7c1e238b0808340 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 1.3E-63 T 09-03-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 RG43_RS21400 ce1ab0c41ce9e971e7c1e238b0808340 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.3E-63 T 09-03-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 RG43_RS21400 ce1ab0c41ce9e971e7c1e238b0808340 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.3E-63 T 09-03-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 RG43_RS21400 ce1ab0c41ce9e971e7c1e238b0808340 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.3E-63 T 09-03-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 RG43_RS21400 ce1ab0c41ce9e971e7c1e238b0808340 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.3E-63 T 09-03-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 RG43_RS21400 ce1ab0c41ce9e971e7c1e238b0808340 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 1.3E-63 T 09-03-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 RG43_RS21400 ce1ab0c41ce9e971e7c1e238b0808340 1073 SUPERFAMILY SSF56059 128 401 1.06E-109 T 09-03-2017 RG43_RS21400 ce1ab0c41ce9e971e7c1e238b0808340 1073 SMART SM00851 956 1042 7.0E-30 T 09-03-2017 IPR011607 Methylglyoxal synthase-like domain RG43_RS21400 ce1ab0c41ce9e971e7c1e238b0808340 1073 SUPERFAMILY SSF52440 1 127 2.73E-50 T 09-03-2017 IPR016185 Pre-ATP-grasp domain RG43_RS21400 ce1ab0c41ce9e971e7c1e238b0808340 1073 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 674 876 1.1E-38 T 09-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RG43_RS21400 ce1ab0c41ce9e971e7c1e238b0808340 1073 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.6E-77 T 09-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RG43_RS21400 ce1ab0c41ce9e971e7c1e238b0808340 1073 Gene3D G3DSA:3.40.50.1380 939 1072 2.9E-39 T 09-03-2017 IPR011607 Methylglyoxal synthase-like domain RG43_RS21400 ce1ab0c41ce9e971e7c1e238b0808340 1073 SUPERFAMILY SSF52335 938 1071 2.09E-35 T 09-03-2017 IPR011607 Methylglyoxal synthase-like domain RG43_RS21400 ce1ab0c41ce9e971e7c1e238b0808340 1073 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 8.4E-40 T 09-03-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 RG43_RS21400 ce1ab0c41ce9e971e7c1e238b0808340 1073 Gene3D G3DSA:3.40.50.20 3 108 1.4E-46 T 09-03-2017 IPR016185 Pre-ATP-grasp domain RG43_RS21400 ce1ab0c41ce9e971e7c1e238b0808340 1073 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1068 13.369 T 09-03-2017 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 RG43_RS21400 ce1ab0c41ce9e971e7c1e238b0808340 1073 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 710 724 - T 09-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RG43_RS21400 ce1ab0c41ce9e971e7c1e238b0808340 1073 Gene3D G3DSA:3.30.1490.20 687 745 2.5E-26 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RG43_RS21400 ce1ab0c41ce9e971e7c1e238b0808340 1073 Gene3D G3DSA:1.10.1030.10 400 538 5.5E-52 T 09-03-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 RG43_RS21400 ce1ab0c41ce9e971e7c1e238b0808340 1073 SUPERFAMILY SSF48108 396 554 3.53E-52 T 09-03-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 RG43_RS21400 ce1ab0c41ce9e971e7c1e238b0808340 1073 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 09-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RG43_RS21400 ce1ab0c41ce9e971e7c1e238b0808340 1073 SUPERFAMILY SSF56059 674 934 8.66E-105 T 09-03-2017 RG43_RS21400 ce1ab0c41ce9e971e7c1e238b0808340 1073 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 09-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RG43_RS21400 ce1ab0c41ce9e971e7c1e238b0808340 1073 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 839 846 - T 09-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RG43_RS21400 ce1ab0c41ce9e971e7c1e238b0808340 1073 Gene3D G3DSA:3.40.50.20 539 663 2.8E-62 T 09-03-2017 IPR016185 Pre-ATP-grasp domain RG43_RS21400 ce1ab0c41ce9e971e7c1e238b0808340 1073 Gene3D G3DSA:3.30.470.20 200 399 8.5E-76 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RG43_RS21400 ce1ab0c41ce9e971e7c1e238b0808340 1073 Gene3D G3DSA:3.30.470.20 746 933 1.1E-81 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RG43_RS21400 ce1ab0c41ce9e971e7c1e238b0808340 1073 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1063 13.196 T 09-03-2017 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 RG43_RS21400 ce1ab0c41ce9e971e7c1e238b0808340 1073 Gene3D G3DSA:3.30.1490.20 141 199 8.7E-28 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RG43_RS21400 ce1ab0c41ce9e971e7c1e238b0808340 1073 Pfam PF02142 MGS-like domain 957 1041 3.1E-18 T 09-03-2017 IPR011607 Methylglyoxal synthase-like domain RG43_RS21400 ce1ab0c41ce9e971e7c1e238b0808340 1073 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1053 0.0 T 09-03-2017 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 RG43_RS21400 ce1ab0c41ce9e971e7c1e238b0808340 1073 SUPERFAMILY SSF52440 557 676 9.93E-50 T 09-03-2017 IPR016185 Pre-ATP-grasp domain RG43_RS21400 ce1ab0c41ce9e971e7c1e238b0808340 1073 SMART SM01096 424 547 4.7E-72 T 09-03-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 RG43_RS11055 cc88dffbd346873eeb56006db45a1021 533 Gene3D G3DSA:1.20.120.30 36 176 1.3E-37 T 09-03-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 RG43_RS11055 cc88dffbd346873eeb56006db45a1021 533 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 290 312 - T 09-03-2017 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site RG43_RS11055 cc88dffbd346873eeb56006db45a1021 533 Pfam PF00672 HAMP domain 195 260 1.0E-9 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RG43_RS11055 cc88dffbd346873eeb56006db45a1021 533 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 511 3.6E-63 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RG43_RS11055 cc88dffbd346873eeb56006db45a1021 533 SMART SM00304 212 264 5.7E-9 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RG43_RS11055 cc88dffbd346873eeb56006db45a1021 533 Gene3D G3DSA:1.10.287.950 281 484 2.0E-62 T 09-03-2017 RG43_RS11055 cc88dffbd346873eeb56006db45a1021 533 Pfam PF02203 Tar ligand binding domain homologue 1 168 6.7E-45 T 09-03-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 RG43_RS11055 cc88dffbd346873eeb56006db45a1021 533 SUPERFAMILY SSF47170 39 176 3.4E-36 T 09-03-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 RG43_RS11055 cc88dffbd346873eeb56006db45a1021 533 SMART SM00319 44 178 8.3E-56 T 09-03-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 RG43_RS11055 cc88dffbd346873eeb56006db45a1021 533 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 392 421 4.3E-79 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RG43_RS11055 cc88dffbd346873eeb56006db45a1021 533 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 440 469 4.3E-79 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RG43_RS11055 cc88dffbd346873eeb56006db45a1021 533 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 188 208 4.3E-79 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RG43_RS11055 cc88dffbd346873eeb56006db45a1021 533 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 363 390 4.3E-79 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RG43_RS11055 cc88dffbd346873eeb56006db45a1021 533 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 4.3E-79 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RG43_RS11055 cc88dffbd346873eeb56006db45a1021 533 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 286 315 4.3E-79 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RG43_RS11055 cc88dffbd346873eeb56006db45a1021 533 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 53 68 4.3E-79 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RG43_RS11055 cc88dffbd346873eeb56006db45a1021 533 SUPERFAMILY SSF58104 232 513 3.92E-75 T 09-03-2017 RG43_RS11055 cc88dffbd346873eeb56006db45a1021 533 SMART SM00283 265 512 1.0E-93 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RG43_RS08340 e270736cd58547ea99ec4b6d84f2ddbb 312 Pfam PF03466 LysR substrate binding domain 97 281 3.4E-27 T 09-03-2017 IPR005119 LysR, substrate-binding RG43_RS08340 e270736cd58547ea99ec4b6d84f2ddbb 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 7.1E-18 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS08340 e270736cd58547ea99ec4b6d84f2ddbb 312 Gene3D G3DSA:3.40.190.10 96 190 2.2E-15 T 09-03-2017 RG43_RS08340 e270736cd58547ea99ec4b6d84f2ddbb 312 Gene3D G3DSA:3.40.190.10 191 246 2.3E-9 T 09-03-2017 RG43_RS08340 e270736cd58547ea99ec4b6d84f2ddbb 312 Gene3D G3DSA:1.10.10.10 10 91 6.4E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS08340 e270736cd58547ea99ec4b6d84f2ddbb 312 SUPERFAMILY SSF46785 11 119 2.12E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS08340 e270736cd58547ea99ec4b6d84f2ddbb 312 SUPERFAMILY SSF53850 96 292 6.15E-29 T 09-03-2017 RG43_RS08340 e270736cd58547ea99ec4b6d84f2ddbb 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 2.4E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS08340 e270736cd58547ea99ec4b6d84f2ddbb 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 2.4E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS08340 e270736cd58547ea99ec4b6d84f2ddbb 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 2.4E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS07700 43a475a13add901df4e41e9c9397e558 277 Pfam PF01048 Phosphorylase superfamily 27 273 1.0E-40 T 09-03-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RG43_RS07700 43a475a13add901df4e41e9c9397e558 277 PIRSF PIRSF000477 1 276 2.9E-118 T 09-03-2017 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217|Reactome: R-HSA-74259 RG43_RS07700 43a475a13add901df4e41e9c9397e558 277 TIGRFAM TIGR01699 XAPA: xanthosine phosphorylase 27 274 1.8E-160 T 09-03-2017 IPR010943 Xanthosine phosphorylase GO:0004731|GO:0005737|GO:0055086 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 RG43_RS07700 43a475a13add901df4e41e9c9397e558 277 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 27 272 3.2E-105 T 09-03-2017 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217|Reactome: R-HSA-74259 RG43_RS07700 43a475a13add901df4e41e9c9397e558 277 SUPERFAMILY SSF53167 9 275 8.35E-83 T 09-03-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RG43_RS07700 43a475a13add901df4e41e9c9397e558 277 Gene3D G3DSA:3.40.50.1580 14 276 2.1E-91 T 09-03-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RG43_RS21810 43f189249ae593519644eab2acea49c9 340 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 133 7.4E-33 T 09-03-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RG43_RS21810 43f189249ae593519644eab2acea49c9 340 SUPERFAMILY SSF51735 139 304 1.55E-34 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS21810 43f189249ae593519644eab2acea49c9 340 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 09-03-2017 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 RG43_RS21810 43f189249ae593519644eab2acea49c9 340 Pfam PF00107 Zinc-binding dehydrogenase 173 300 1.5E-25 T 09-03-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RG43_RS21810 43f189249ae593519644eab2acea49c9 340 SUPERFAMILY SSF50129 3 172 7.61E-51 T 09-03-2017 IPR011032 GroES-like RG43_RS21810 43f189249ae593519644eab2acea49c9 340 SMART SM00829 10 310 9.4E-4 T 09-03-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RG43_RS21810 43f189249ae593519644eab2acea49c9 340 Gene3D G3DSA:3.90.180.10 2 165 1.1E-55 T 09-03-2017 IPR011032 GroES-like RG43_RS21810 43f189249ae593519644eab2acea49c9 340 Gene3D G3DSA:3.40.50.720 166 284 4.3E-34 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS13545 fd11743129aaeaa30d4691acaa1c16aa 430 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 374 384 - T 09-03-2017 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311|GO:0016791 RG43_RS13545 fd11743129aaeaa30d4691acaa1c16aa 430 Pfam PF00782 Dual specificity phosphatase, catalytic domain 306 429 1.8E-26 T 09-03-2017 IPR000340 Dual specificity phosphatase, catalytic domain GO:0006470|GO:0008138 RG43_RS13545 fd11743129aaeaa30d4691acaa1c16aa 430 SMART SM00195 298 430 1.7E-37 T 09-03-2017 IPR020422 Dual specificity protein phosphatase domain GO:0006470|GO:0008138 RG43_RS13545 fd11743129aaeaa30d4691acaa1c16aa 430 SUPERFAMILY SSF52799 281 429 7.21E-26 T 09-03-2017 IPR029021 Protein-tyrosine phosphatase-like RG43_RS13545 fd11743129aaeaa30d4691acaa1c16aa 430 Gene3D G3DSA:3.90.190.10 286 430 1.8E-24 T 09-03-2017 IPR029021 Protein-tyrosine phosphatase-like RG43_RS13545 fd11743129aaeaa30d4691acaa1c16aa 430 SMART SM00404 335 425 3.9E-4 T 09-03-2017 IPR003595 Protein-tyrosine phosphatase, catalytic RG43_RS07635 cb00efad88887911f17109e261844497 283 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 16 275 1.1E-51 T 09-03-2017 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 RG43_RS07635 cb00efad88887911f17109e261844497 283 Pfam PF08543 Phosphomethylpyrimidine kinase 88 265 1.0E-25 T 09-03-2017 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-964975 RG43_RS07635 cb00efad88887911f17109e261844497 283 SUPERFAMILY SSF53613 18 274 4.37E-59 T 09-03-2017 IPR029056 Ribokinase-like RG43_RS07635 cb00efad88887911f17109e261844497 283 Hamap MF_01638 Pyridoxine/pyridoxal/pyridoxamine kinase [pdxK]. 1 283 55.381 T 09-03-2017 IPR023479 Pyridoxine/pyridoxal/pyridoxamine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282 RG43_RS07635 cb00efad88887911f17109e261844497 283 Gene3D G3DSA:3.40.1190.20 18 276 1.2E-68 T 09-03-2017 IPR029056 Ribokinase-like RG43_RS01275 df9b74708cc1a3803391984b0597a232 175 SUPERFAMILY SSF46894 111 169 1.33E-7 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RG43_RS01275 df9b74708cc1a3803391984b0597a232 175 Gene3D G3DSA:3.20.20.150 21 71 1.5E-10 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain RG43_RS01275 df9b74708cc1a3803391984b0597a232 175 Gene3D G3DSA:1.10.10.10 108 169 2.0E-7 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS01275 df9b74708cc1a3803391984b0597a232 175 Pfam PF00196 Bacterial regulatory proteins, luxR family 117 167 1.3E-5 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS17265 d78f7f8c5640cb6cab5a57f9a079460a 347 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 72.46 T 09-03-2017 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 RG43_RS17265 d78f7f8c5640cb6cab5a57f9a079460a 347 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 22 341 7.6E-131 T 09-03-2017 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 RG43_RS17265 d78f7f8c5640cb6cab5a57f9a079460a 347 SUPERFAMILY SSF142754 29 341 2.35E-108 T 09-03-2017 RG43_RS17265 d78f7f8c5640cb6cab5a57f9a079460a 347 Pfam PF02445 Quinolinate synthetase A protein 31 340 6.1E-104 T 09-03-2017 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 RG43_RS20680 456634840ecc8c243e1ffa2773ca7012 274 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 58.63 T 09-03-2017 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 RG43_RS20680 456634840ecc8c243e1ffa2773ca7012 274 Gene3D G3DSA:1.10.166.10 1 70 5.3E-33 T 09-03-2017 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 RG43_RS20680 456634840ecc8c243e1ffa2773ca7012 274 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 6.1E-13 T 09-03-2017 IPR001451 Hexapeptide repeat RG43_RS20680 456634840ecc8c243e1ffa2773ca7012 274 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 09-03-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 RG43_RS20680 456634840ecc8c243e1ffa2773ca7012 274 SUPERFAMILY SSF51161 1 256 8.46E-81 T 09-03-2017 IPR011004 Trimeric LpxA-like RG43_RS20680 456634840ecc8c243e1ffa2773ca7012 274 Gene3D G3DSA:2.160.10.10 89 255 1.6E-64 T 09-03-2017 RG43_RS20680 456634840ecc8c243e1ffa2773ca7012 274 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 3 273 1.6E-165 T 09-03-2017 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 RG43_RS20680 456634840ecc8c243e1ffa2773ca7012 274 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 133 166 0.0019 T 09-03-2017 IPR001451 Hexapeptide repeat RG43_RS20680 456634840ecc8c243e1ffa2773ca7012 274 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 3 69 4.9E-26 T 09-03-2017 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 RG43_RS20015 13119f177bb40251c69d693b6a942708 367 PIRSF PIRSF000729 1 367 2.7E-147 T 09-03-2017 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 RG43_RS20015 13119f177bb40251c69d693b6a942708 367 Gene3D G3DSA:3.40.1160.10 3 260 1.3E-59 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase RG43_RS20015 13119f177bb40251c69d693b6a942708 367 SMART SM00359 276 359 7.2E-23 T 09-03-2017 IPR002478 PUA domain GO:0003723 RG43_RS20015 13119f177bb40251c69d693b6a942708 367 SUPERFAMILY SSF53633 6 256 1.13E-65 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase RG43_RS20015 13119f177bb40251c69d693b6a942708 367 ProSitePatterns PS00902 Glutamate 5-kinase signature. 207 224 - T 09-03-2017 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 RG43_RS20015 13119f177bb40251c69d693b6a942708 367 PRINTS PR00474 Glutamate 5-kinase family signature 116 137 2.9E-57 T 09-03-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 RG43_RS20015 13119f177bb40251c69d693b6a942708 367 PRINTS PR00474 Glutamate 5-kinase family signature 209 229 2.9E-57 T 09-03-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 RG43_RS20015 13119f177bb40251c69d693b6a942708 367 PRINTS PR00474 Glutamate 5-kinase family signature 76 104 2.9E-57 T 09-03-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 RG43_RS20015 13119f177bb40251c69d693b6a942708 367 PRINTS PR00474 Glutamate 5-kinase family signature 148 175 2.9E-57 T 09-03-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 RG43_RS20015 13119f177bb40251c69d693b6a942708 367 PRINTS PR00474 Glutamate 5-kinase family signature 42 56 2.9E-57 T 09-03-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 RG43_RS20015 13119f177bb40251c69d693b6a942708 367 Gene3D G3DSA:2.30.130.10 273 365 1.9E-26 T 09-03-2017 IPR015947 PUA-like domain RG43_RS20015 13119f177bb40251c69d693b6a942708 367 Pfam PF00696 Amino acid kinase family 6 234 1.7E-44 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase RG43_RS20015 13119f177bb40251c69d693b6a942708 367 Hamap MF_00456 Glutamate 5-kinase [proB]. 5 258 36.214 T 09-03-2017 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 RG43_RS20015 13119f177bb40251c69d693b6a942708 367 TIGRFAM TIGR01027 proB: glutamate 5-kinase 5 365 5.4E-157 T 09-03-2017 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 RG43_RS20015 13119f177bb40251c69d693b6a942708 367 SUPERFAMILY SSF88697 276 365 1.1E-23 T 09-03-2017 IPR015947 PUA-like domain RG43_RS20015 13119f177bb40251c69d693b6a942708 367 Pfam PF01472 PUA domain 276 350 1.4E-22 T 09-03-2017 IPR002478 PUA domain GO:0003723 RG43_RS21160 bcf94f5e37763b699264d1aabf76fcb1 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 330 1.1E-46 T 09-03-2017 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 RG43_RS21160 bcf94f5e37763b699264d1aabf76fcb1 574 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 431 450 - T 09-03-2017 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 RG43_RS21160 bcf94f5e37763b699264d1aabf76fcb1 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 168 6.3E-58 T 09-03-2017 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 RG43_RS21160 bcf94f5e37763b699264d1aabf76fcb1 574 Gene3D G3DSA:3.40.50.1220 190 357 3.5E-69 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain RG43_RS21160 bcf94f5e37763b699264d1aabf76fcb1 574 Gene3D G3DSA:3.40.50.970 358 558 8.1E-77 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS21160 bcf94f5e37763b699264d1aabf76fcb1 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 394 545 1.6E-49 T 09-03-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RG43_RS21160 bcf94f5e37763b699264d1aabf76fcb1 574 SUPERFAMILY SSF52518 2 179 9.51E-64 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS21160 bcf94f5e37763b699264d1aabf76fcb1 574 SUPERFAMILY SSF52518 371 567 8.58E-69 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS21160 bcf94f5e37763b699264d1aabf76fcb1 574 SUPERFAMILY SSF52467 189 362 2.62E-63 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain RG43_RS21160 bcf94f5e37763b699264d1aabf76fcb1 574 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 569 3.0E-285 T 09-03-2017 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 RG43_RS21160 bcf94f5e37763b699264d1aabf76fcb1 574 Gene3D G3DSA:3.40.50.970 2 173 8.6E-74 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS09555 3b2d3e8abdb68eab9a2d732a1eb0c7ea 405 Gene3D G3DSA:3.40.50.2000 295 357 6.8E-4 T 09-03-2017 RG43_RS09555 3b2d3e8abdb68eab9a2d732a1eb0c7ea 405 SUPERFAMILY SSF53756 11 405 9.42E-27 T 09-03-2017 RG43_RS09555 3b2d3e8abdb68eab9a2d732a1eb0c7ea 405 TIGRFAM TIGR04015 WcaC: colanic acid biosynthesis glycosyltransferase WcaC 1 405 4.2E-271 T 09-03-2017 IPR023916 Colanic acid biosynthesis, glycosyl transferase, WcaC RG43_RS09555 3b2d3e8abdb68eab9a2d732a1eb0c7ea 405 Pfam PF00534 Glycosyl transferases group 1 292 349 9.1E-7 T 09-03-2017 IPR001296 Glycosyl transferase, family 1 RG43_RS09555 3b2d3e8abdb68eab9a2d732a1eb0c7ea 405 Pfam PF13439 Glycosyltransferase Family 4 13 223 4.3E-10 T 09-03-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 RG43_RS07795 8af877a14823a1d92920ec3dfc0dc5ca 418 PRINTS PR00762 Chloride channel signature 153 172 5.2E-7 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 RG43_RS07795 8af877a14823a1d92920ec3dfc0dc5ca 418 PRINTS PR00762 Chloride channel signature 103 122 5.2E-7 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 RG43_RS07795 8af877a14823a1d92920ec3dfc0dc5ca 418 PRINTS PR00762 Chloride channel signature 320 340 5.2E-7 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 RG43_RS07795 8af877a14823a1d92920ec3dfc0dc5ca 418 Pfam PF00654 Voltage gated chloride channel 93 391 2.1E-18 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 RG43_RS07795 8af877a14823a1d92920ec3dfc0dc5ca 418 Hamap MF_01115 Putative ion-transport protein YfeO [yfeO]. 1 411 50.591 T 09-03-2017 IPR022969 Chloride channel YfeO RG43_RS07795 8af877a14823a1d92920ec3dfc0dc5ca 418 SUPERFAMILY SSF81340 9 398 5.49E-44 T 09-03-2017 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 RG43_RS07795 8af877a14823a1d92920ec3dfc0dc5ca 418 Gene3D G3DSA:1.10.3080.10 12 361 5.5E-18 T 09-03-2017 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 RG43_RS08830 f97465ace72b31f0b2d61cc1f3e6c1a6 265 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 95 123 9.2E-5 T 09-03-2017 IPR030930 Adhesin of bacterial autotransporter system RG43_RS08830 f97465ace72b31f0b2d61cc1f3e6c1a6 265 Pfam PF03212 Pertactin 85 168 5.6E-12 T 09-03-2017 IPR004899 Pertactin, central region RG43_RS08830 f97465ace72b31f0b2d61cc1f3e6c1a6 265 Gene3D G3DSA:2.40.128.130 173 262 2.6E-14 T 09-03-2017 IPR005546 Autotransporter beta-domain RG43_RS08830 f97465ace72b31f0b2d61cc1f3e6c1a6 265 SUPERFAMILY SSF103515 181 262 9.42E-9 T 09-03-2017 IPR005546 Autotransporter beta-domain RG43_RS08830 f97465ace72b31f0b2d61cc1f3e6c1a6 265 Gene3D G3DSA:2.160.20.20 133 169 2.0E-7 T 09-03-2017 IPR012332 P22 tailspike C-terminal domain-like RG43_RS08830 f97465ace72b31f0b2d61cc1f3e6c1a6 265 Gene3D G3DSA:2.160.20.20 54 132 1.9E-5 T 09-03-2017 IPR012332 P22 tailspike C-terminal domain-like RG43_RS18680 c564a138f040b7ce63fb3db8488183e1 1049 SUPERFAMILY SSF82693 135 182 4.13E-27 T 09-03-2017 RG43_RS18680 c564a138f040b7ce63fb3db8488183e1 1049 SUPERFAMILY SSF82693 274 330 4.13E-27 T 09-03-2017 RG43_RS18680 c564a138f040b7ce63fb3db8488183e1 1049 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1049 0.0 T 09-03-2017 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 RG43_RS18680 c564a138f040b7ce63fb3db8488183e1 1049 SUPERFAMILY SSF82714 182 271 5.1E-20 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RG43_RS18680 c564a138f040b7ce63fb3db8488183e1 1049 Gene3D G3DSA:3.30.70.1430 569 671 1.2E-41 T 09-03-2017 RG43_RS18680 c564a138f040b7ce63fb3db8488183e1 1049 PRINTS PR00702 Acriflavin resistance protein family signature 623 637 2.4E-115 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS18680 c564a138f040b7ce63fb3db8488183e1 1049 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.4E-115 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS18680 c564a138f040b7ce63fb3db8488183e1 1049 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 2.4E-115 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS18680 c564a138f040b7ce63fb3db8488183e1 1049 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 2.4E-115 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS18680 c564a138f040b7ce63fb3db8488183e1 1049 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.4E-115 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS18680 c564a138f040b7ce63fb3db8488183e1 1049 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 2.4E-115 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS18680 c564a138f040b7ce63fb3db8488183e1 1049 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.4E-115 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS18680 c564a138f040b7ce63fb3db8488183e1 1049 PRINTS PR00702 Acriflavin resistance protein family signature 554 571 2.4E-115 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS18680 c564a138f040b7ce63fb3db8488183e1 1049 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.4E-115 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS18680 c564a138f040b7ce63fb3db8488183e1 1049 Pfam PF00873 AcrB/AcrD/AcrF family 1 1030 0.0 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS18680 c564a138f040b7ce63fb3db8488183e1 1049 Gene3D G3DSA:3.30.2090.10 724 812 1.3E-27 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RG43_RS18680 c564a138f040b7ce63fb3db8488183e1 1049 Gene3D G3DSA:3.30.2090.10 181 275 6.5E-24 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RG43_RS18680 c564a138f040b7ce63fb3db8488183e1 1049 Gene3D G3DSA:3.30.70.1430 38 140 2.0E-36 T 09-03-2017 RG43_RS18680 c564a138f040b7ce63fb3db8488183e1 1049 SUPERFAMILY SSF82693 38 132 4.88E-28 T 09-03-2017 RG43_RS18680 c564a138f040b7ce63fb3db8488183e1 1049 Gene3D G3DSA:1.10.3850.10 817 1031 3.9E-56 T 09-03-2017 RG43_RS18680 c564a138f040b7ce63fb3db8488183e1 1049 Gene3D G3DSA:1.10.3850.10 278 498 3.6E-60 T 09-03-2017 RG43_RS18680 c564a138f040b7ce63fb3db8488183e1 1049 SUPERFAMILY SSF82866 809 1033 9.29E-45 T 09-03-2017 RG43_RS18680 c564a138f040b7ce63fb3db8488183e1 1049 SUPERFAMILY SSF82693 567 671 2.25E-33 T 09-03-2017 RG43_RS18680 c564a138f040b7ce63fb3db8488183e1 1049 SUPERFAMILY SSF82714 725 812 2.49E-22 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RG43_RS18680 c564a138f040b7ce63fb3db8488183e1 1049 SUPERFAMILY SSF82866 296 497 1.7E-48 T 09-03-2017 RG43_RS05815 1c22e9428d5342ff7ce99f6d8c9c5ee3 243 Gene3D G3DSA:3.40.50.1360 78 214 1.5E-8 T 09-03-2017 RG43_RS05815 1c22e9428d5342ff7ce99f6d8c9c5ee3 243 SMART SM01134 74 234 3.5E-51 T 09-03-2017 RG43_RS05815 1c22e9428d5342ff7ce99f6d8c9c5ee3 243 ProSitePatterns PS00894 DeoR-type HTH domain signature. 5 39 - T 09-03-2017 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 RG43_RS05815 1c22e9428d5342ff7ce99f6d8c9c5ee3 243 Gene3D G3DSA:1.10.10.10 1 53 4.7E-11 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS05815 1c22e9428d5342ff7ce99f6d8c9c5ee3 243 Pfam PF00455 DeoR C terminal sensor domain 76 233 1.6E-44 T 09-03-2017 IPR014036 DeoR C-terminal sensor domain RG43_RS05815 1c22e9428d5342ff7ce99f6d8c9c5ee3 243 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 23 37 1.5E-9 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RG43_RS05815 1c22e9428d5342ff7ce99f6d8c9c5ee3 243 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 37 55 1.5E-9 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RG43_RS05815 1c22e9428d5342ff7ce99f6d8c9c5ee3 243 SUPERFAMILY SSF100950 76 233 1.15E-27 T 09-03-2017 RG43_RS05815 1c22e9428d5342ff7ce99f6d8c9c5ee3 243 SUPERFAMILY SSF46785 4 59 2.34E-13 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS05815 1c22e9428d5342ff7ce99f6d8c9c5ee3 243 SMART SM00420 5 57 1.4E-22 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RG43_RS05815 1c22e9428d5342ff7ce99f6d8c9c5ee3 243 Pfam PF08220 DeoR-like helix-turn-helix domain 5 60 2.1E-21 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RG43_RS03480 2bc648bb77091c4d80875cc50b611e6a 258 Gene3D G3DSA:1.20.120.530 96 225 7.8E-22 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal RG43_RS03480 2bc648bb77091c4d80875cc50b611e6a 258 SMART SM00345 13 72 9.2E-26 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS03480 2bc648bb77091c4d80875cc50b611e6a 258 Pfam PF07729 FCD domain 96 219 2.2E-18 T 09-03-2017 IPR011711 GntR, C-terminal RG43_RS03480 2bc648bb77091c4d80875cc50b611e6a 258 Gene3D G3DSA:1.10.10.10 5 77 3.8E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS03480 2bc648bb77091c4d80875cc50b611e6a 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 1.2E-7 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS03480 2bc648bb77091c4d80875cc50b611e6a 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 1.2E-7 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS03480 2bc648bb77091c4d80875cc50b611e6a 258 SUPERFAMILY SSF46785 2 76 2.61E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS03480 2bc648bb77091c4d80875cc50b611e6a 258 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 72 1.5E-22 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS03480 2bc648bb77091c4d80875cc50b611e6a 258 SMART SM00895 96 220 9.1E-16 T 09-03-2017 IPR011711 GntR, C-terminal RG43_RS03480 2bc648bb77091c4d80875cc50b611e6a 258 SUPERFAMILY SSF48008 94 222 9.94E-21 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal RG43_RS26395 f5687ae93ae586f4f9ea80ed1c23a9e2 630 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 628 47.258 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RG43_RS26395 f5687ae93ae586f4f9ea80ed1c23a9e2 630 SUPERFAMILY SSF55874 5 215 9.75E-70 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS26395 f5687ae93ae586f4f9ea80ed1c23a9e2 630 ProSitePatterns PS00177 DNA topoisomerase II signature. 416 424 - T 09-03-2017 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS26395 f5687ae93ae586f4f9ea80ed1c23a9e2 630 SMART SM00387 27 173 2.4E-19 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS26395 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR00418 DNA topoisomerase II family signature 31 46 1.1E-58 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS26395 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR00418 DNA topoisomerase II family signature 517 529 1.1E-58 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS26395 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR00418 DNA topoisomerase II family signature 66 79 1.1E-58 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS26395 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR00418 DNA topoisomerase II family signature 560 576 1.1E-58 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS26395 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR00418 DNA topoisomerase II family signature 414 428 1.1E-58 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS26395 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR00418 DNA topoisomerase II family signature 497 514 1.1E-58 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS26395 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR00418 DNA topoisomerase II family signature 109 123 1.1E-58 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS26395 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR00418 DNA topoisomerase II family signature 266 279 1.1E-58 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS26395 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR00418 DNA topoisomerase II family signature 479 495 1.1E-58 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS26395 f5687ae93ae586f4f9ea80ed1c23a9e2 630 Pfam PF01751 Toprim domain 413 521 1.8E-12 T 09-03-2017 IPR006171 Toprim domain RG43_RS26395 f5687ae93ae586f4f9ea80ed1c23a9e2 630 SMART SM00433 34 624 2.8E-213 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS26395 f5687ae93ae586f4f9ea80ed1c23a9e2 630 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 2 625 0.0 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RG43_RS26395 f5687ae93ae586f4f9ea80ed1c23a9e2 630 Pfam PF00204 DNA gyrase B 218 384 4.7E-39 T 09-03-2017 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS26395 f5687ae93ae586f4f9ea80ed1c23a9e2 630 Gene3D G3DSA:3.30.230.10 217 390 3.4E-47 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RG43_RS26395 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 2.0E-159 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RG43_RS26395 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 2.0E-159 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RG43_RS26395 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 2.0E-159 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RG43_RS26395 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 2.0E-159 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RG43_RS26395 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 2.0E-159 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RG43_RS26395 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 2.0E-159 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RG43_RS26395 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 2.0E-159 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RG43_RS26395 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 2.0E-159 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RG43_RS26395 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 2.0E-159 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RG43_RS26395 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 2.0E-159 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RG43_RS26395 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 2.0E-159 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RG43_RS26395 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 2.0E-159 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RG43_RS26395 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 2.0E-159 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RG43_RS26395 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 2.0E-159 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RG43_RS26395 f5687ae93ae586f4f9ea80ed1c23a9e2 630 SUPERFAMILY SSF56719 388 621 3.4E-78 T 09-03-2017 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 RG43_RS26395 f5687ae93ae586f4f9ea80ed1c23a9e2 630 Gene3D G3DSA:3.40.50.670 398 611 3.9E-77 T 09-03-2017 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS26395 f5687ae93ae586f4f9ea80ed1c23a9e2 630 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 171 3.6E-18 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS26395 f5687ae93ae586f4f9ea80ed1c23a9e2 630 Gene3D G3DSA:3.30.565.10 15 215 6.2E-78 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS26395 f5687ae93ae586f4f9ea80ed1c23a9e2 630 SUPERFAMILY SSF54211 217 382 2.85E-47 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold RG43_RS26395 f5687ae93ae586f4f9ea80ed1c23a9e2 630 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 556 620 2.4E-25 T 09-03-2017 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RG43_RS04020 f5687ae93ae586f4f9ea80ed1c23a9e2 630 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 628 47.258 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RG43_RS04020 f5687ae93ae586f4f9ea80ed1c23a9e2 630 SUPERFAMILY SSF55874 5 215 9.75E-70 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS04020 f5687ae93ae586f4f9ea80ed1c23a9e2 630 ProSitePatterns PS00177 DNA topoisomerase II signature. 416 424 - T 09-03-2017 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS04020 f5687ae93ae586f4f9ea80ed1c23a9e2 630 SMART SM00387 27 173 2.4E-19 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS04020 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR00418 DNA topoisomerase II family signature 31 46 1.1E-58 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS04020 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR00418 DNA topoisomerase II family signature 517 529 1.1E-58 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS04020 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR00418 DNA topoisomerase II family signature 66 79 1.1E-58 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS04020 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR00418 DNA topoisomerase II family signature 560 576 1.1E-58 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS04020 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR00418 DNA topoisomerase II family signature 414 428 1.1E-58 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS04020 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR00418 DNA topoisomerase II family signature 497 514 1.1E-58 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS04020 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR00418 DNA topoisomerase II family signature 109 123 1.1E-58 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS04020 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR00418 DNA topoisomerase II family signature 266 279 1.1E-58 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS04020 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR00418 DNA topoisomerase II family signature 479 495 1.1E-58 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS04020 f5687ae93ae586f4f9ea80ed1c23a9e2 630 Pfam PF01751 Toprim domain 413 521 1.8E-12 T 09-03-2017 IPR006171 Toprim domain RG43_RS04020 f5687ae93ae586f4f9ea80ed1c23a9e2 630 SMART SM00433 34 624 2.8E-213 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS04020 f5687ae93ae586f4f9ea80ed1c23a9e2 630 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 2 625 0.0 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RG43_RS04020 f5687ae93ae586f4f9ea80ed1c23a9e2 630 Pfam PF00204 DNA gyrase B 218 384 4.7E-39 T 09-03-2017 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS04020 f5687ae93ae586f4f9ea80ed1c23a9e2 630 Gene3D G3DSA:3.30.230.10 217 390 3.4E-47 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RG43_RS04020 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 2.0E-159 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RG43_RS04020 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 2.0E-159 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RG43_RS04020 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 2.0E-159 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RG43_RS04020 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 2.0E-159 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RG43_RS04020 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 2.0E-159 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RG43_RS04020 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 2.0E-159 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RG43_RS04020 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 2.0E-159 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RG43_RS04020 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 2.0E-159 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RG43_RS04020 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 2.0E-159 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RG43_RS04020 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 2.0E-159 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RG43_RS04020 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 2.0E-159 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RG43_RS04020 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 2.0E-159 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RG43_RS04020 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 2.0E-159 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RG43_RS04020 f5687ae93ae586f4f9ea80ed1c23a9e2 630 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 2.0E-159 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RG43_RS04020 f5687ae93ae586f4f9ea80ed1c23a9e2 630 SUPERFAMILY SSF56719 388 621 3.4E-78 T 09-03-2017 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 RG43_RS04020 f5687ae93ae586f4f9ea80ed1c23a9e2 630 Gene3D G3DSA:3.40.50.670 398 611 3.9E-77 T 09-03-2017 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS04020 f5687ae93ae586f4f9ea80ed1c23a9e2 630 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 171 3.6E-18 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS04020 f5687ae93ae586f4f9ea80ed1c23a9e2 630 Gene3D G3DSA:3.30.565.10 15 215 6.2E-78 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS04020 f5687ae93ae586f4f9ea80ed1c23a9e2 630 SUPERFAMILY SSF54211 217 382 2.85E-47 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold RG43_RS04020 f5687ae93ae586f4f9ea80ed1c23a9e2 630 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 556 620 2.4E-25 T 09-03-2017 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RG43_RS02030 847c46aedb463dd8c17909b174c161cf 278 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 251 1.6E-75 T 09-03-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 RG43_RS02030 847c46aedb463dd8c17909b174c161cf 278 SUPERFAMILY SSF53335 5 267 5.15E-78 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS02030 847c46aedb463dd8c17909b174c161cf 278 Gene3D G3DSA:1.10.1020.10 60 157 1.5E-34 T 09-03-2017 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 RG43_RS02030 847c46aedb463dd8c17909b174c161cf 278 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 267 4.8E-106 T 09-03-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 RG43_RS02030 847c46aedb463dd8c17909b174c161cf 278 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 09-03-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RG43_RS02030 847c46aedb463dd8c17909b174c161cf 278 Gene3D G3DSA:3.40.50.150 1 59 2.1E-54 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS02030 847c46aedb463dd8c17909b174c161cf 278 Gene3D G3DSA:3.40.50.150 160 267 2.1E-54 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS02030 847c46aedb463dd8c17909b174c161cf 278 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 4.2E-19 T 09-03-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 RG43_RS02030 847c46aedb463dd8c17909b174c161cf 278 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 4.2E-19 T 09-03-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 RG43_RS02030 847c46aedb463dd8c17909b174c161cf 278 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 4.2E-19 T 09-03-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 RG43_RS02030 847c46aedb463dd8c17909b174c161cf 278 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 4.2E-19 T 09-03-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 RG43_RS02030 847c46aedb463dd8c17909b174c161cf 278 PIRSF PIRSF000398 1 272 3.5E-68 T 09-03-2017 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 RG43_RS01915 54d7836f0196375657f8c86eb141a4e9 170 Hamap MF_00105 Transcription elongation factor GreA [greA]. 14 166 28.83 T 09-03-2017 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 RG43_RS01915 54d7836f0196375657f8c86eb141a4e9 170 SUPERFAMILY SSF54534 92 167 4.32E-20 T 09-03-2017 RG43_RS01915 54d7836f0196375657f8c86eb141a4e9 170 Hamap MF_00930 Transcription elongation factor GreB [greB]. 13 168 54.298 T 09-03-2017 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 RG43_RS01915 54d7836f0196375657f8c86eb141a4e9 170 SUPERFAMILY SSF46557 15 90 4.32E-28 T 09-03-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RG43_RS01915 54d7836f0196375657f8c86eb141a4e9 170 Gene3D G3DSA:3.10.50.30 88 167 8.3E-27 T 09-03-2017 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 RG43_RS01915 54d7836f0196375657f8c86eb141a4e9 170 Pfam PF03449 Transcription elongation factor, N-terminal 18 86 7.7E-27 T 09-03-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RG43_RS01915 54d7836f0196375657f8c86eb141a4e9 170 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 14 169 1.4E-88 T 09-03-2017 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 RG43_RS01915 54d7836f0196375657f8c86eb141a4e9 170 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 93 167 1.5E-22 T 09-03-2017 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 RG43_RS01915 54d7836f0196375657f8c86eb141a4e9 170 PIRSF PIRSF006092 11 169 1.1E-45 T 09-03-2017 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 RG43_RS01915 54d7836f0196375657f8c86eb141a4e9 170 Gene3D G3DSA:1.10.287.180 13 87 6.9E-27 T 09-03-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RG43_RS01915 54d7836f0196375657f8c86eb141a4e9 170 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 131 147 - T 09-03-2017 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 RG43_RS01915 54d7836f0196375657f8c86eb141a4e9 170 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 29 60 - T 09-03-2017 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 RG43_RS17820 eb8bdc68665e73812a6909357ef36d8b 512 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 63 458 8.3E-123 T 09-03-2017 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 RG43_RS17820 eb8bdc68665e73812a6909357ef36d8b 512 Gene3D G3DSA:3.60.110.10 216 478 2.3E-22 T 09-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RG43_RS17820 eb8bdc68665e73812a6909357ef36d8b 512 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 10 495 24.124 T 09-03-2017 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 RG43_RS17820 eb8bdc68665e73812a6909357ef36d8b 512 Pfam PF00795 Carbon-nitrogen hydrolase 224 478 2.5E-39 T 09-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RG43_RS17820 eb8bdc68665e73812a6909357ef36d8b 512 SUPERFAMILY SSF56317 216 490 2.22E-37 T 09-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RG43_RS05790 3732ed8f52ef8acf92a740c4dd6f4425 401 Gene3D G3DSA:3.40.640.10 32 280 6.5E-78 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS05790 3732ed8f52ef8acf92a740c4dd6f4425 401 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 213 232 - T 09-03-2017 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site RG43_RS05790 3732ed8f52ef8acf92a740c4dd6f4425 401 Pfam PF00266 Aminotransferase class-V 21 388 8.7E-142 T 09-03-2017 IPR000192 Aminotransferase class V domain RG43_RS05790 3732ed8f52ef8acf92a740c4dd6f4425 401 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 4 401 5.2E-232 T 09-03-2017 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 RG43_RS05790 3732ed8f52ef8acf92a740c4dd6f4425 401 Gene3D G3DSA:3.90.1150.10 281 393 4.9E-19 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RG43_RS05790 3732ed8f52ef8acf92a740c4dd6f4425 401 SUPERFAMILY SSF53383 5 397 5.92E-111 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS22730 03e2db48f5d95483b76bb930bb9673a0 1107 Pfam PF00924 Mechanosensitive ion channel 875 1074 8.8E-54 T 09-03-2017 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 RG43_RS22730 03e2db48f5d95483b76bb930bb9673a0 1107 Gene3D G3DSA:2.30.30.60 933 982 1.3E-16 T 09-03-2017 RG43_RS22730 03e2db48f5d95483b76bb930bb9673a0 1107 SUPERFAMILY SSF82861 834 916 1.7E-8 T 09-03-2017 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 RG43_RS22730 03e2db48f5d95483b76bb930bb9673a0 1107 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 478 814 7.0E-117 T 09-03-2017 IPR025692 Mechanosensitive ion channel inner membrane domain 1 RG43_RS22730 03e2db48f5d95483b76bb930bb9673a0 1107 SUPERFAMILY SSF82689 985 1083 3.4E-16 T 09-03-2017 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 RG43_RS22730 03e2db48f5d95483b76bb930bb9673a0 1107 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 947 981 - T 09-03-2017 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 RG43_RS22730 03e2db48f5d95483b76bb930bb9673a0 1107 Gene3D G3DSA:3.30.70.100 989 1072 6.6E-8 T 09-03-2017 RG43_RS22730 03e2db48f5d95483b76bb930bb9673a0 1107 Pfam PF12795 Mechanosensitive ion channel porin domain 31 256 4.6E-54 T 09-03-2017 IPR024393 Mechanosensitive ion channel MscS, porin domain RG43_RS22730 03e2db48f5d95483b76bb930bb9673a0 1107 SUPERFAMILY SSF50182 918 983 7.52E-17 T 09-03-2017 IPR010920 LSM domain RG43_RS12490 e5554637a3fb76e7850fda5a92547edb 211 PIRSF PIRSF001435 1 210 4.9E-52 T 09-03-2017 IPR005759 Endonuclease III GO:0003906|GO:0006284 RG43_RS12490 e5554637a3fb76e7850fda5a92547edb 211 Gene3D G3DSA:1.10.340.30 22 122 6.7E-34 T 09-03-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 RG43_RS12490 e5554637a3fb76e7850fda5a92547edb 211 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.629 T 09-03-2017 IPR005759 Endonuclease III GO:0003906|GO:0006284 RG43_RS12490 e5554637a3fb76e7850fda5a92547edb 211 SUPERFAMILY SSF48150 3 208 4.24E-74 T 09-03-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 RG43_RS12490 e5554637a3fb76e7850fda5a92547edb 211 SMART SM00478 38 185 9.2E-56 T 09-03-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 RG43_RS12490 e5554637a3fb76e7850fda5a92547edb 211 TIGRFAM TIGR01083 nth: endonuclease III 4 194 3.2E-90 T 09-03-2017 IPR005759 Endonuclease III GO:0003906|GO:0006284 RG43_RS12490 e5554637a3fb76e7850fda5a92547edb 211 Gene3D G3DSA:1.10.1670.10 123 208 1.4E-36 T 09-03-2017 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 RG43_RS12490 e5554637a3fb76e7850fda5a92547edb 211 SMART SM00525 186 206 1.4E-5 T 09-03-2017 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 RG43_RS12490 e5554637a3fb76e7850fda5a92547edb 211 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 5.7E-20 T 09-03-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 RG43_RS12490 e5554637a3fb76e7850fda5a92547edb 211 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 09-03-2017 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 RG43_RS12490 e5554637a3fb76e7850fda5a92547edb 211 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 09-03-2017 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 RG43_RS12490 e5554637a3fb76e7850fda5a92547edb 211 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.1E-4 T 09-03-2017 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 RG43_RS12490 e5554637a3fb76e7850fda5a92547edb 211 Pfam PF00633 Helix-hairpin-helix motif 100 127 3.1E-7 T 09-03-2017 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 RG43_RS21720 c277587af6f20a812ecd7441427ec1f0 225 Pfam PF13419 Haloacid dehalogenase-like hydrolase 78 194 7.5E-21 T 09-03-2017 IPR023214 HAD-like domain RG43_RS21720 c277587af6f20a812ecd7441427ec1f0 225 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 4 221 1.6E-75 T 09-03-2017 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 RG43_RS21720 c277587af6f20a812ecd7441427ec1f0 225 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 64 195 3.5E-9 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RG43_RS21720 c277587af6f20a812ecd7441427ec1f0 225 SUPERFAMILY SSF56784 3 222 2.03E-47 T 09-03-2017 IPR023214 HAD-like domain RG43_RS21720 c277587af6f20a812ecd7441427ec1f0 225 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 109 189 2.0E-17 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RG43_RS21720 c277587af6f20a812ecd7441427ec1f0 225 Gene3D G3DSA:3.40.50.1000 90 223 1.6E-44 T 09-03-2017 IPR023214 HAD-like domain RG43_RS21720 c277587af6f20a812ecd7441427ec1f0 225 Gene3D G3DSA:1.10.150.240 15 89 5.6E-19 T 09-03-2017 IPR023198 Phosphoglycolate phosphatase, domain 2 RG43_RS07250 116bddd68b8f96de06d9da6d574d1a85 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 1.7E-201 T 09-03-2017 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-73817 RG43_RS07250 116bddd68b8f96de06d9da6d574d1a85 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 4.9E-162 T 09-03-2017 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 RG43_RS07250 116bddd68b8f96de06d9da6d574d1a85 488 Pfam PF00571 CBS domain 95 140 5.3E-9 T 09-03-2017 IPR000644 CBS domain RG43_RS07250 116bddd68b8f96de06d9da6d574d1a85 488 Pfam PF00571 CBS domain 153 202 1.7E-4 T 09-03-2017 IPR000644 CBS domain RG43_RS07250 116bddd68b8f96de06d9da6d574d1a85 488 SMART SM01240 7 473 0.0 T 09-03-2017 RG43_RS07250 116bddd68b8f96de06d9da6d574d1a85 488 SMART SM00116 96 144 2.9E-11 T 09-03-2017 IPR000644 CBS domain RG43_RS07250 116bddd68b8f96de06d9da6d574d1a85 488 SMART SM00116 158 206 1.9E-8 T 09-03-2017 IPR000644 CBS domain RG43_RS07250 116bddd68b8f96de06d9da6d574d1a85 488 SUPERFAMILY SSF54631 94 203 1.11E-24 T 09-03-2017 RG43_RS07250 116bddd68b8f96de06d9da6d574d1a85 488 SUPERFAMILY SSF51412 217 477 1.31E-127 T 09-03-2017 RG43_RS07250 116bddd68b8f96de06d9da6d574d1a85 488 SUPERFAMILY SSF51412 1 90 1.31E-127 T 09-03-2017 RG43_RS07250 116bddd68b8f96de06d9da6d574d1a85 488 PIRSF PIRSF000130 1 487 1.3E-197 T 09-03-2017 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-73817 RG43_RS07250 116bddd68b8f96de06d9da6d574d1a85 488 Gene3D G3DSA:3.20.20.70 2 485 1.3E-194 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS07250 116bddd68b8f96de06d9da6d574d1a85 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 85.506 T 09-03-2017 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-73817 RG43_RS07250 116bddd68b8f96de06d9da6d574d1a85 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 09-03-2017 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 RG43_RS22400 bea13689fa0092f411c9e907131b298f 647 SUPERFAMILY SSF55816 355 597 3.66E-39 T 09-03-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS22400 bea13689fa0092f411c9e907131b298f 647 SUPERFAMILY SSF56300 19 353 1.29E-85 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like RG43_RS22400 bea13689fa0092f411c9e907131b298f 647 ProSitePatterns PS00785 5'-nucleotidase signature 1. 24 36 - T 09-03-2017 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS22400 bea13689fa0092f411c9e907131b298f 647 ProSitePatterns PS00786 5'-nucleotidase signature 2. 109 120 - T 09-03-2017 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS22400 bea13689fa0092f411c9e907131b298f 647 Gene3D G3DSA:3.60.21.10 12 359 4.2E-97 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like RG43_RS22400 bea13689fa0092f411c9e907131b298f 647 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 22 647 0.0 T 09-03-2017 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 RG43_RS22400 bea13689fa0092f411c9e907131b298f 647 PRINTS PR01607 Apyrase family signature 215 232 5.7E-31 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS22400 bea13689fa0092f411c9e907131b298f 647 PRINTS PR01607 Apyrase family signature 530 549 5.7E-31 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS22400 bea13689fa0092f411c9e907131b298f 647 PRINTS PR01607 Apyrase family signature 428 451 5.7E-31 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS22400 bea13689fa0092f411c9e907131b298f 647 PRINTS PR01607 Apyrase family signature 22 40 5.7E-31 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS22400 bea13689fa0092f411c9e907131b298f 647 PRINTS PR01607 Apyrase family signature 243 266 5.7E-31 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS22400 bea13689fa0092f411c9e907131b298f 647 PRINTS PR01607 Apyrase family signature 283 303 5.7E-31 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS22400 bea13689fa0092f411c9e907131b298f 647 Gene3D G3DSA:3.90.780.10 360 596 1.6E-45 T 09-03-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS22400 bea13689fa0092f411c9e907131b298f 647 Pfam PF00149 Calcineurin-like phosphoesterase 24 259 2.9E-12 T 09-03-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RG43_RS22400 bea13689fa0092f411c9e907131b298f 647 Pfam PF02872 5'-nucleotidase, C-terminal domain 355 550 5.6E-25 T 09-03-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS24650 5001e585b1305abd33ffad482938cdf2 236 Pfam PF07702 UTRA domain 91 230 1.1E-20 T 09-03-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RG43_RS24650 5001e585b1305abd33ffad482938cdf2 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 30 44 4.9E-8 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS24650 5001e585b1305abd33ffad482938cdf2 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 60 4.9E-8 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS24650 5001e585b1305abd33ffad482938cdf2 236 SUPERFAMILY SSF46785 3 74 1.57E-15 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS24650 5001e585b1305abd33ffad482938cdf2 236 SMART SM00345 11 70 7.2E-20 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS24650 5001e585b1305abd33ffad482938cdf2 236 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 70 1.1E-19 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS24650 5001e585b1305abd33ffad482938cdf2 236 Gene3D G3DSA:1.10.10.10 3 67 2.6E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS24650 5001e585b1305abd33ffad482938cdf2 236 Gene3D G3DSA:3.40.1410.10 68 234 1.2E-18 T 09-03-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RG43_RS24650 5001e585b1305abd33ffad482938cdf2 236 SMART SM00866 91 231 5.2E-11 T 09-03-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RG43_RS24650 5001e585b1305abd33ffad482938cdf2 236 SUPERFAMILY SSF64288 60 234 1.21E-21 T 09-03-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RG43_RS16795 f24ace2707747f9ffe99231f0e96914c 71 SUPERFAMILY SSF46689 1 50 6.81E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS16795 f24ace2707747f9ffe99231f0e96914c 71 Gene3D G3DSA:1.10.10.60 8 49 1.6E-11 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS16795 f24ace2707747f9ffe99231f0e96914c 71 Pfam PF01527 Transposase 4 47 1.1E-13 T 09-03-2017 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RG43_RS03270 1259407de6b0f5f8c267033fbf8f13a2 286 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 284 3.3E-111 T 09-03-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RG43_RS03270 1259407de6b0f5f8c267033fbf8f13a2 286 TIGRFAM TIGR01858 tag_bisphos_ald: class II aldolase, tagatose bisphosphate family 3 284 1.4E-163 T 09-03-2017 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY GO:0005975|GO:0008270|GO:0009025 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395 RG43_RS03270 1259407de6b0f5f8c267033fbf8f13a2 286 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 283 1.1E-95 T 09-03-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RG43_RS03270 1259407de6b0f5f8c267033fbf8f13a2 286 Hamap MF_01293 D-tagatose-1,6-bisphosphate aldolase subunit KbaY [kbaY]. 1 286 77.319 T 09-03-2017 IPR023788 D-tagatose-bisphosphate aldolase, class II, subunit KbaY GO:0005975|GO:0008270|GO:0009025|GO:2001059 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395 RG43_RS03270 1259407de6b0f5f8c267033fbf8f13a2 286 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 09-03-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RG43_RS03270 1259407de6b0f5f8c267033fbf8f13a2 286 Gene3D G3DSA:3.20.20.70 1 284 7.8E-108 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS03270 1259407de6b0f5f8c267033fbf8f13a2 286 PIRSF PIRSF001359 1 284 5.7E-115 T 09-03-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RG43_RS03270 1259407de6b0f5f8c267033fbf8f13a2 286 SUPERFAMILY SSF51569 3 283 7.47E-97 T 09-03-2017 RG43_RS03270 1259407de6b0f5f8c267033fbf8f13a2 286 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 71 84 - T 09-03-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RG43_RS13950 5b86580b2e5935cabca91c91c0a12f7b 268 Gene3D G3DSA:3.40.50.300 3 251 1.9E-70 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS13950 5b86580b2e5935cabca91c91c0a12f7b 268 Pfam PF00005 ABC transporter 31 178 1.8E-33 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS13950 5b86580b2e5935cabca91c91c0a12f7b 268 SUPERFAMILY SSF52540 5 251 2.51E-58 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS13950 5b86580b2e5935cabca91c91c0a12f7b 268 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS13950 5b86580b2e5935cabca91c91c0a12f7b 268 SMART SM00382 39 228 2.1E-15 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS09590 2c06bb22ab345e5dfeb471f21464e374 407 Gene3D G3DSA:3.40.50.2000 219 293 2.7E-6 T 09-03-2017 RG43_RS09590 2c06bb22ab345e5dfeb471f21464e374 407 Pfam PF00534 Glycosyl transferases group 1 219 389 1.1E-21 T 09-03-2017 IPR001296 Glycosyl transferase, family 1 RG43_RS09590 2c06bb22ab345e5dfeb471f21464e374 407 TIGRFAM TIGR04007 wcaI: colanic acid biosynthesis glycosyltransferase WcaI 1 407 5.9E-272 T 09-03-2017 IPR023910 Colanic acid biosynthesis, glycosyl transferase, WcaI RG43_RS09590 2c06bb22ab345e5dfeb471f21464e374 407 Pfam PF13579 Glycosyl transferase 4-like domain 15 204 4.3E-28 T 09-03-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 RG43_RS09590 2c06bb22ab345e5dfeb471f21464e374 407 SUPERFAMILY SSF53756 354 403 1.36E-39 T 09-03-2017 RG43_RS09590 2c06bb22ab345e5dfeb471f21464e374 407 SUPERFAMILY SSF53756 2 322 1.36E-39 T 09-03-2017 RG43_RS12920 86150d597bc56f4cdf128e770b047ca6 483 Gene3D G3DSA:1.10.1040.10 272 482 3.6E-68 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RG43_RS12920 86150d597bc56f4cdf128e770b047ca6 483 SUPERFAMILY SSF48179 273 482 9.52E-53 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RG43_RS12920 86150d597bc56f4cdf128e770b047ca6 483 SUPERFAMILY SSF51735 2 264 2.87E-67 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS12920 86150d597bc56f4cdf128e770b047ca6 483 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 17 172 2.1E-41 T 09-03-2017 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 RG43_RS12920 86150d597bc56f4cdf128e770b047ca6 483 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 203 458 2.9E-82 T 09-03-2017 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 RG43_RS12920 86150d597bc56f4cdf128e770b047ca6 483 Hamap MF_00670 Altronate oxidoreductase [uxaB]. 1 483 57.76 T 09-03-2017 IPR023668 Altronate oxidoreductase GO:0009026|GO:0055114 KEGG: 00040+1.1.1.58 RG43_RS12920 86150d597bc56f4cdf128e770b047ca6 483 Gene3D G3DSA:3.40.50.720 3 263 2.1E-70 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS02070 4bfe248019df24cbdac7dcbab91622c4 408 SUPERFAMILY SSF53649 3 100 5.5E-55 T 09-03-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RG43_RS02070 4bfe248019df24cbdac7dcbab91622c4 408 SUPERFAMILY SSF53649 230 401 5.5E-55 T 09-03-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RG43_RS02070 4bfe248019df24cbdac7dcbab91622c4 408 PIRSF PIRSF001491 1 402 3.3E-115 T 09-03-2017 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 RG43_RS02070 4bfe248019df24cbdac7dcbab91622c4 408 Gene3D G3DSA:3.40.720.10 233 401 1.9E-59 T 09-03-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RG43_RS02070 4bfe248019df24cbdac7dcbab91622c4 408 Gene3D G3DSA:3.40.720.10 2 100 1.9E-59 T 09-03-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RG43_RS02070 4bfe248019df24cbdac7dcbab91622c4 408 Pfam PF01676 Metalloenzyme superfamily 3 388 1.3E-48 T 09-03-2017 IPR006124 Metalloenzyme GO:0003824|GO:0046872 RG43_RS17615 ff0f145f715bee1b2fa041c03331b8cf 894 SUPERFAMILY SSF52402 253 353 1.42E-5 T 09-03-2017 RG43_RS17615 ff0f145f715bee1b2fa041c03331b8cf 894 Gene3D G3DSA:3.30.565.10 732 885 9.0E-39 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS17615 ff0f145f715bee1b2fa041c03331b8cf 894 SUPERFAMILY SSF47384 653 731 3.92E-14 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS17615 ff0f145f715bee1b2fa041c03331b8cf 894 SUPERFAMILY SSF55874 719 885 1.28E-40 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS17615 ff0f145f715bee1b2fa041c03331b8cf 894 Gene3D G3DSA:3.40.50.300 21 229 5.5E-101 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS17615 ff0f145f715bee1b2fa041c03331b8cf 894 Pfam PF13492 GAF domain 529 644 4.9E-8 T 09-03-2017 IPR003018 GAF domain GO:0005515 RG43_RS17615 ff0f145f715bee1b2fa041c03331b8cf 894 SMART SM00387 773 883 5.2E-33 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS17615 ff0f145f715bee1b2fa041c03331b8cf 894 Gene3D G3DSA:1.20.120.620 397 502 6.7E-40 T 09-03-2017 RG43_RS17615 ff0f145f715bee1b2fa041c03331b8cf 894 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 776 882 2.2E-22 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS17615 ff0f145f715bee1b2fa041c03331b8cf 894 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 21 230 4.0E-97 T 09-03-2017 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 RG43_RS17615 ff0f145f715bee1b2fa041c03331b8cf 894 Gene3D G3DSA:3.40.50.620 245 352 5.7E-7 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS17615 ff0f145f715bee1b2fa041c03331b8cf 894 Pfam PF13493 Domain of unknown function (DUF4118) 403 507 1.1E-28 T 09-03-2017 IPR025201 Sensor protein KdpD, transmembrane domain RG43_RS17615 ff0f145f715bee1b2fa041c03331b8cf 894 Gene3D G3DSA:1.10.287.130 657 726 7.1E-16 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS17615 ff0f145f715bee1b2fa041c03331b8cf 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 810 824 1.6E-12 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS17615 ff0f145f715bee1b2fa041c03331b8cf 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 867 880 1.6E-12 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS17615 ff0f145f715bee1b2fa041c03331b8cf 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 843 861 1.6E-12 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS17615 ff0f145f715bee1b2fa041c03331b8cf 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 828 838 1.6E-12 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS17615 ff0f145f715bee1b2fa041c03331b8cf 894 SMART SM00388 663 730 1.4E-13 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS17615 ff0f145f715bee1b2fa041c03331b8cf 894 Pfam PF00512 His Kinase A (phospho-acceptor) domain 664 730 1.5E-10 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS04420 b017fbe8351421da2a445bc2b75d21e8 319 ProSitePatterns PS01141 Bacterial type II secretion system protein C signature. 256 282 - T 09-03-2017 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 RG43_RS04420 b017fbe8351421da2a445bc2b75d21e8 319 SUPERFAMILY SSF50156 223 317 1.13E-14 T 09-03-2017 IPR001478 PDZ domain GO:0005515 RG43_RS04420 b017fbe8351421da2a445bc2b75d21e8 319 Gene3D G3DSA:2.30.42.10 247 316 4.5E-8 T 09-03-2017 IPR001478 PDZ domain GO:0005515 RG43_RS04420 b017fbe8351421da2a445bc2b75d21e8 319 Pfam PF11356 Type II secretion system protein C 46 185 2.7E-29 T 09-03-2017 IPR024961 Type II secretion system protein C, N-terminal RG43_RS04420 b017fbe8351421da2a445bc2b75d21e8 319 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 43 317 2.6E-43 T 09-03-2017 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 RG43_RS26795 b017fbe8351421da2a445bc2b75d21e8 319 ProSitePatterns PS01141 Bacterial type II secretion system protein C signature. 256 282 - T 09-03-2017 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 RG43_RS26795 b017fbe8351421da2a445bc2b75d21e8 319 SUPERFAMILY SSF50156 223 317 1.13E-14 T 09-03-2017 IPR001478 PDZ domain GO:0005515 RG43_RS26795 b017fbe8351421da2a445bc2b75d21e8 319 Gene3D G3DSA:2.30.42.10 247 316 4.5E-8 T 09-03-2017 IPR001478 PDZ domain GO:0005515 RG43_RS26795 b017fbe8351421da2a445bc2b75d21e8 319 Pfam PF11356 Type II secretion system protein C 46 185 2.7E-29 T 09-03-2017 IPR024961 Type II secretion system protein C, N-terminal RG43_RS26795 b017fbe8351421da2a445bc2b75d21e8 319 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 43 317 2.6E-43 T 09-03-2017 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 RG43_RS08205 be32d489a80d17c08849f6434cd54ab7 216 Gene3D G3DSA:3.30.70.1070 134 212 2.8E-13 T 09-03-2017 IPR007730 Sporulation-related domain GO:0042834 RG43_RS08205 be32d489a80d17c08849f6434cd54ab7 216 SUPERFAMILY SSF110997 136 213 1.96E-12 T 09-03-2017 IPR007730 Sporulation-related domain GO:0042834 RG43_RS08205 be32d489a80d17c08849f6434cd54ab7 216 Pfam PF05036 Sporulation related domain 137 210 4.3E-11 T 09-03-2017 IPR007730 Sporulation-related domain GO:0042834 RG43_RS08205 be32d489a80d17c08849f6434cd54ab7 216 Hamap MF_02022 Cell division protein DedD [dedD]. 10 215 24.036 T 09-03-2017 IPR032898 Cell division protein DedD GO:0030428|GO:0032506 RG43_RS22020 771c2b56cd6f1eb84f3386502be51344 394 SUPERFAMILY SSF51658 1 133 2.09E-79 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain RG43_RS22020 771c2b56cd6f1eb84f3386502be51344 394 SUPERFAMILY SSF51658 163 383 2.09E-79 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain RG43_RS22020 771c2b56cd6f1eb84f3386502be51344 394 PIRSF PIRSF016049 1 392 7.8E-184 T 09-03-2017 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 RG43_RS22020 771c2b56cd6f1eb84f3386502be51344 394 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 394 6.3E-239 T 09-03-2017 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 RG43_RS22020 771c2b56cd6f1eb84f3386502be51344 394 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 388 1.2E-167 T 09-03-2017 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 RG43_RS22020 771c2b56cd6f1eb84f3386502be51344 394 Gene3D G3DSA:3.20.20.150 1 391 5.1E-156 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain RG43_RS22020 771c2b56cd6f1eb84f3386502be51344 394 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 394 225.989 T 09-03-2017 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 RG43_RS24445 19c5ed765ae963a9382e13d89227355c 457 Pfam PF00672 HAMP domain 165 234 6.1E-13 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RG43_RS24445 19c5ed765ae963a9382e13d89227355c 457 SUPERFAMILY SSF55874 289 453 7.91E-39 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS24445 19c5ed765ae963a9382e13d89227355c 457 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 82 146 1.9E-10 T 09-03-2017 IPR032404 Two-component sensor protein CpxA, periplasmic domain RG43_RS24445 19c5ed765ae963a9382e13d89227355c 457 SMART SM00387 345 455 3.9E-33 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS24445 19c5ed765ae963a9382e13d89227355c 457 SMART SM00304 184 237 1.1E-9 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RG43_RS24445 19c5ed765ae963a9382e13d89227355c 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 2.4E-15 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS24445 19c5ed765ae963a9382e13d89227355c 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 452 2.4E-15 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS24445 19c5ed765ae963a9382e13d89227355c 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 408 2.4E-15 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS24445 19c5ed765ae963a9382e13d89227355c 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 394 2.4E-15 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS24445 19c5ed765ae963a9382e13d89227355c 457 SUPERFAMILY SSF47384 224 299 3.53E-16 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS24445 19c5ed765ae963a9382e13d89227355c 457 Gene3D G3DSA:1.10.287.130 228 285 8.8E-18 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS24445 19c5ed765ae963a9382e13d89227355c 457 SMART SM00388 238 300 1.4E-15 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS24445 19c5ed765ae963a9382e13d89227355c 457 Gene3D G3DSA:3.30.565.10 286 454 1.6E-39 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS24445 19c5ed765ae963a9382e13d89227355c 457 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 454 3.1E-19 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS24445 19c5ed765ae963a9382e13d89227355c 457 Pfam PF00512 His Kinase A (phospho-acceptor) domain 238 299 2.5E-14 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS06810 1305b79acb84dc6eeefa66b0d5e2f93f 345 SUPERFAMILY SSF55315 103 179 3.3E-10 T 09-03-2017 IPR029064 50S ribosomal protein L30e-like RG43_RS06810 1305b79acb84dc6eeefa66b0d5e2f93f 345 Gene3D G3DSA:3.30.1330.30 102 178 6.3E-9 T 09-03-2017 IPR029064 50S ribosomal protein L30e-like RG43_RS06810 1305b79acb84dc6eeefa66b0d5e2f93f 345 PIRSF PIRSF006280 1 345 4.0E-176 T 09-03-2017 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted GO:0008168 RG43_RS06810 1305b79acb84dc6eeefa66b0d5e2f93f 345 Pfam PF00588 SpoU rRNA Methylase family 199 336 6.5E-28 T 09-03-2017 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 RG43_RS06810 1305b79acb84dc6eeefa66b0d5e2f93f 345 SMART SM00967 109 184 7.4E-9 T 09-03-2017 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 RG43_RS06810 1305b79acb84dc6eeefa66b0d5e2f93f 345 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 110 181 1.4E-12 T 09-03-2017 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 RG43_RS06810 1305b79acb84dc6eeefa66b0d5e2f93f 345 SUPERFAMILY SSF75217 185 343 6.8E-36 T 09-03-2017 IPR029028 Alpha/beta knot methyltransferases RG43_RS06810 1305b79acb84dc6eeefa66b0d5e2f93f 345 Gene3D G3DSA:3.40.1280.10 191 343 4.8E-35 T 09-03-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RG43_RS02130 6ed557e63f9430a407a0ba7bc8dff3e8 190 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 31 188 2.3E-50 T 09-03-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RG43_RS02130 6ed557e63f9430a407a0ba7bc8dff3e8 190 SUPERFAMILY SSF50891 26 189 7.01E-59 T 09-03-2017 IPR029000 Cyclophilin-like domain RG43_RS02130 6ed557e63f9430a407a0ba7bc8dff3e8 190 Gene3D G3DSA:2.40.100.10 27 189 3.1E-56 T 09-03-2017 IPR029000 Cyclophilin-like domain RG43_RS02130 6ed557e63f9430a407a0ba7bc8dff3e8 190 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 65 82 - T 09-03-2017 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 RG43_RS02130 6ed557e63f9430a407a0ba7bc8dff3e8 190 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 44 59 3.1E-10 T 09-03-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RG43_RS02130 6ed557e63f9430a407a0ba7bc8dff3e8 190 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 70 82 3.1E-10 T 09-03-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RG43_RS02130 6ed557e63f9430a407a0ba7bc8dff3e8 190 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 144 159 3.1E-10 T 09-03-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RG43_RS01625 5ae0816c961f60a72196781e72d7205e 255 Gene3D G3DSA:3.40.50.300 2 251 4.0E-67 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS01625 5ae0816c961f60a72196781e72d7205e 255 SUPERFAMILY SSF52540 4 253 6.48E-62 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS01625 5ae0816c961f60a72196781e72d7205e 255 Pfam PF00005 ABC transporter 21 181 3.0E-32 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS01625 5ae0816c961f60a72196781e72d7205e 255 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS01625 5ae0816c961f60a72196781e72d7205e 255 SMART SM00382 30 230 6.6E-8 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS01625 5ae0816c961f60a72196781e72d7205e 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 233 253 2.1E-10 T 09-03-2017 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RG43_RS12460 f2ee52c123cfc6f650ab3a774f1f429d 218 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 16 218 38.773 T 09-03-2017 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 RG43_RS12460 f2ee52c123cfc6f650ab3a774f1f429d 218 PIRSF PIRSF000190 1 218 6.8E-87 T 09-03-2017 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 RG43_RS12460 f2ee52c123cfc6f650ab3a774f1f429d 218 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 178 218 7.5E-19 T 09-03-2017 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 RG43_RS12460 f2ee52c123cfc6f650ab3a774f1f429d 218 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 40 122 1.0E-24 T 09-03-2017 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 RG43_RS12460 f2ee52c123cfc6f650ab3a774f1f429d 218 Gene3D G3DSA:2.30.110.10 22 218 2.9E-84 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 RG43_RS12460 f2ee52c123cfc6f650ab3a774f1f429d 218 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 188 201 - T 09-03-2017 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 RG43_RS12460 f2ee52c123cfc6f650ab3a774f1f429d 218 SUPERFAMILY SSF50475 21 218 1.37E-67 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 RG43_RS12460 f2ee52c123cfc6f650ab3a774f1f429d 218 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 3 218 8.6E-105 T 09-03-2017 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 RG43_RS05140 3282cdb7e71ddaee4a66f6aca98c0fc1 286 Pfam PF05552 Conserved TM helix 16 64 3.2E-13 T 09-03-2017 IPR008910 Conserved TM helix RG43_RS05140 3282cdb7e71ddaee4a66f6aca98c0fc1 286 SUPERFAMILY SSF82861 28 112 7.98E-18 T 09-03-2017 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 RG43_RS05140 3282cdb7e71ddaee4a66f6aca98c0fc1 286 Gene3D G3DSA:3.30.70.100 182 266 8.7E-33 T 09-03-2017 RG43_RS05140 3282cdb7e71ddaee4a66f6aca98c0fc1 286 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 143 177 - T 09-03-2017 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 RG43_RS05140 3282cdb7e71ddaee4a66f6aca98c0fc1 286 SUPERFAMILY SSF82689 181 278 1.44E-33 T 09-03-2017 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 RG43_RS05140 3282cdb7e71ddaee4a66f6aca98c0fc1 286 Gene3D G3DSA:2.30.30.60 129 178 6.0E-20 T 09-03-2017 RG43_RS05140 3282cdb7e71ddaee4a66f6aca98c0fc1 286 SUPERFAMILY SSF50182 114 179 6.87E-17 T 09-03-2017 IPR010920 LSM domain RG43_RS05140 3282cdb7e71ddaee4a66f6aca98c0fc1 286 Pfam PF00924 Mechanosensitive ion channel 72 268 4.1E-59 T 09-03-2017 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 RG43_RS00190 84f8887328299a69dd6dddb5931d51a0 339 Gene3D G3DSA:1.10.260.40 13 71 1.5E-22 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS00190 84f8887328299a69dd6dddb5931d51a0 339 Gene3D G3DSA:3.40.50.2300 181 339 1.4E-42 T 09-03-2017 RG43_RS00190 84f8887328299a69dd6dddb5931d51a0 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 14 59 4.5E-19 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS00190 84f8887328299a69dd6dddb5931d51a0 339 SUPERFAMILY SSF53822 72 339 1.28E-51 T 09-03-2017 IPR028082 Periplasmic binding protein-like I RG43_RS00190 84f8887328299a69dd6dddb5931d51a0 339 Gene3D G3DSA:3.40.50.2300 72 180 1.1E-30 T 09-03-2017 RG43_RS00190 84f8887328299a69dd6dddb5931d51a0 339 SUPERFAMILY SSF47413 12 70 9.38E-17 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS00190 84f8887328299a69dd6dddb5931d51a0 339 Pfam PF13377 Periplasmic binding protein-like domain 180 339 6.4E-29 T 09-03-2017 RG43_RS00190 84f8887328299a69dd6dddb5931d51a0 339 ProSitePatterns PS00356 LacI-type HTH domain signature. 15 33 - T 09-03-2017 RG43_RS00190 84f8887328299a69dd6dddb5931d51a0 339 SMART SM00354 12 82 5.5E-29 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS11295 2adc85c04e205bb322f6838caacfc474 491 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 188 488 4.9E-116 T 09-03-2017 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 RG43_RS11295 2adc85c04e205bb322f6838caacfc474 491 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 176 182 - T 09-03-2017 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 RG43_RS11295 2adc85c04e205bb322f6838caacfc474 491 SUPERFAMILY SSF55347 176 488 4.25E-113 T 09-03-2017 RG43_RS11295 2adc85c04e205bb322f6838caacfc474 491 SUPERFAMILY SSF51735 4 189 4.53E-56 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS11295 2adc85c04e205bb322f6838caacfc474 491 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 9 489 90.991 T 09-03-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 RG43_RS11295 2adc85c04e205bb322f6838caacfc474 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 218 235 8.6E-47 T 09-03-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 RG43_RS11295 2adc85c04e205bb322f6838caacfc474 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 166 194 8.6E-47 T 09-03-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 RG43_RS11295 2adc85c04e205bb322f6838caacfc474 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 142 155 8.6E-47 T 09-03-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 RG43_RS11295 2adc85c04e205bb322f6838caacfc474 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 327 353 8.6E-47 T 09-03-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 RG43_RS11295 2adc85c04e205bb322f6838caacfc474 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 236 252 8.6E-47 T 09-03-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 RG43_RS11295 2adc85c04e205bb322f6838caacfc474 491 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 9 489 6.9E-206 T 09-03-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 RG43_RS11295 2adc85c04e205bb322f6838caacfc474 491 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 13 186 2.6E-57 T 09-03-2017 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 RG43_RS11295 2adc85c04e205bb322f6838caacfc474 491 Gene3D G3DSA:3.40.50.720 7 185 2.1E-59 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS11295 2adc85c04e205bb322f6838caacfc474 491 Gene3D G3DSA:3.30.360.10 186 487 6.2E-122 T 09-03-2017 RG43_RS11295 2adc85c04e205bb322f6838caacfc474 491 PIRSF PIRSF000110 1 491 7.0E-180 T 09-03-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 RG43_RS26120 f8d4229a95cbcce77190ee54897f9425 989 SUPERFAMILY SSF52540 247 418 6.84E-30 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS26120 f8d4229a95cbcce77190ee54897f9425 989 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 3 188 2.0E-31 T 09-03-2017 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 RG43_RS26120 f8d4229a95cbcce77190ee54897f9425 989 Gene3D G3DSA:3.40.50.300 239 418 3.8E-22 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS26120 f8d4229a95cbcce77190ee54897f9425 989 SMART SM00487 244 446 1.7E-15 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain RG43_RS26120 f8d4229a95cbcce77190ee54897f9425 989 Pfam PF12008 Type I restriction and modification enzyme - subunit R C terminal 706 973 3.4E-56 T 09-03-2017 IPR022625 Type-1 restriction enzyme R protein, C-terminal RG43_RS26120 f8d4229a95cbcce77190ee54897f9425 989 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 5 699 5.6E-119 T 09-03-2017 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 RG43_RS26120 f8d4229a95cbcce77190ee54897f9425 989 Pfam PF04851 Type III restriction enzyme, res subunit 247 415 1.3E-35 T 09-03-2017 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 RG43_RS03745 f8d4229a95cbcce77190ee54897f9425 989 SUPERFAMILY SSF52540 247 418 6.84E-30 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS03745 f8d4229a95cbcce77190ee54897f9425 989 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 3 188 2.0E-31 T 09-03-2017 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 RG43_RS03745 f8d4229a95cbcce77190ee54897f9425 989 Gene3D G3DSA:3.40.50.300 239 418 3.8E-22 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS03745 f8d4229a95cbcce77190ee54897f9425 989 SMART SM00487 244 446 1.7E-15 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain RG43_RS03745 f8d4229a95cbcce77190ee54897f9425 989 Pfam PF12008 Type I restriction and modification enzyme - subunit R C terminal 706 973 3.4E-56 T 09-03-2017 IPR022625 Type-1 restriction enzyme R protein, C-terminal RG43_RS03745 f8d4229a95cbcce77190ee54897f9425 989 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 5 699 5.6E-119 T 09-03-2017 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 RG43_RS03745 f8d4229a95cbcce77190ee54897f9425 989 Pfam PF04851 Type III restriction enzyme, res subunit 247 415 1.3E-35 T 09-03-2017 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 RG43_RS08860 0f4c49875a3e679d3f8c7b90763b79cc 586 SMART SM00487 1 185 2.4E-20 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain RG43_RS08860 0f4c49875a3e679d3f8c7b90763b79cc 586 Gene3D G3DSA:3.40.50.300 3 155 1.1E-31 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS08860 0f4c49875a3e679d3f8c7b90763b79cc 586 SMART SM00490 263 345 2.8E-10 T 09-03-2017 IPR001650 Helicase, C-terminal RG43_RS08860 0f4c49875a3e679d3f8c7b90763b79cc 586 SUPERFAMILY SSF52540 50 169 6.1E-39 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS08860 0f4c49875a3e679d3f8c7b90763b79cc 586 SUPERFAMILY SSF52540 237 363 6.1E-39 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS08860 0f4c49875a3e679d3f8c7b90763b79cc 586 SUPERFAMILY SSF57829 424 465 4.76E-7 T 09-03-2017 IPR011332 Zinc-binding ribosomal protein GO:0006412 RG43_RS08860 0f4c49875a3e679d3f8c7b90763b79cc 586 Gene3D G3DSA:3.40.50.300 238 355 2.7E-22 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS08860 0f4c49875a3e679d3f8c7b90763b79cc 586 Pfam PF00271 Helicase conserved C-terminal domain 241 343 1.2E-12 T 09-03-2017 IPR001650 Helicase, C-terminal RG43_RS08860 0f4c49875a3e679d3f8c7b90763b79cc 586 Pfam PF04851 Type III restriction enzyme, res subunit 3 154 9.6E-26 T 09-03-2017 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 RG43_RS14050 83d01350507a3340e891cd50c00238ef 891 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 18 890 0.0 T 09-03-2017 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 RG43_RS14050 83d01350507a3340e891cd50c00238ef 891 Gene3D G3DSA:3.30.499.10 22 249 4.7E-78 T 09-03-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS14050 83d01350507a3340e891cd50c00238ef 891 Gene3D G3DSA:3.40.1060.10 250 367 8.4E-37 T 09-03-2017 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS14050 83d01350507a3340e891cd50c00238ef 891 Pfam PF00330 Aconitase family (aconitate hydratase) 69 562 2.5E-183 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS14050 83d01350507a3340e891cd50c00238ef 891 SUPERFAMILY SSF53732 10 625 1.44E-224 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS14050 83d01350507a3340e891cd50c00238ef 891 Pfam PF00694 Aconitase C-terminal domain 691 818 1.2E-51 T 09-03-2017 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS14050 83d01350507a3340e891cd50c00238ef 891 SUPERFAMILY SSF52016 630 890 1.51E-90 T 09-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RG43_RS14050 83d01350507a3340e891cd50c00238ef 891 ProSitePatterns PS01244 Aconitase family signature 2. 493 506 - T 09-03-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 RG43_RS14050 83d01350507a3340e891cd50c00238ef 891 Gene3D G3DSA:3.30.499.10 369 575 5.9E-62 T 09-03-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS14050 83d01350507a3340e891cd50c00238ef 891 Gene3D G3DSA:3.20.19.10 636 890 5.0E-84 T 09-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RG43_RS14050 83d01350507a3340e891cd50c00238ef 891 PRINTS PR00415 Aconitase family signature 217 232 1.5E-42 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS14050 83d01350507a3340e891cd50c00238ef 891 PRINTS PR00415 Aconitase family signature 431 442 1.5E-42 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS14050 83d01350507a3340e891cd50c00238ef 891 PRINTS PR00415 Aconitase family signature 279 292 1.5E-42 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS14050 83d01350507a3340e891cd50c00238ef 891 PRINTS PR00415 Aconitase family signature 293 306 1.5E-42 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS14050 83d01350507a3340e891cd50c00238ef 891 PRINTS PR00415 Aconitase family signature 146 159 1.5E-42 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS14050 83d01350507a3340e891cd50c00238ef 891 PRINTS PR00415 Aconitase family signature 203 216 1.5E-42 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS14050 83d01350507a3340e891cd50c00238ef 891 PRINTS PR00415 Aconitase family signature 493 506 1.5E-42 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS14050 83d01350507a3340e891cd50c00238ef 891 PRINTS PR00415 Aconitase family signature 170 178 1.5E-42 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS14050 83d01350507a3340e891cd50c00238ef 891 PRINTS PR00415 Aconitase family signature 372 386 1.5E-42 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS14050 83d01350507a3340e891cd50c00238ef 891 ProSitePatterns PS00450 Aconitase family signature 1. 427 443 - T 09-03-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 RG43_RS06060 b9ae733b7ec27504bc2243b8f8ec8e98 351 TIGRFAM TIGR01869 casC_Cse4: CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI 3 324 6.9E-134 T 09-03-2017 IPR010148 CRISPR-associated protein, CT1975 RG43_RS06060 b9ae733b7ec27504bc2243b8f8ec8e98 351 Pfam PF09344 CT1975-like protein 5 335 1.2E-100 T 09-03-2017 IPR010148 CRISPR-associated protein, CT1975 RG43_RS14850 307e4dafc622b419abd71db1a90ceebe 153 Gene3D G3DSA:3.90.79.10 2 143 9.1E-34 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 RG43_RS14850 307e4dafc622b419abd71db1a90ceebe 153 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 09-03-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RG43_RS14850 307e4dafc622b419abd71db1a90ceebe 153 PRINTS PR00502 NUDIX hydrolase family signature 31 45 8.1E-6 T 09-03-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 RG43_RS14850 307e4dafc622b419abd71db1a90ceebe 153 PRINTS PR00502 NUDIX hydrolase family signature 45 60 8.1E-6 T 09-03-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 RG43_RS14850 307e4dafc622b419abd71db1a90ceebe 153 SUPERFAMILY SSF55811 5 152 1.14E-30 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 RG43_RS14850 307e4dafc622b419abd71db1a90ceebe 153 Pfam PF00293 NUDIX domain 4 114 8.0E-19 T 09-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 RG43_RS15230 33db51ce65725584602a2b0c568fda4c 307 SUPERFAMILY SSF55347 126 265 1.08E-43 T 09-03-2017 RG43_RS15230 33db51ce65725584602a2b0c568fda4c 307 SUPERFAMILY SSF51735 3 137 9.51E-42 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS15230 33db51ce65725584602a2b0c568fda4c 307 Gene3D G3DSA:3.30.360.10 129 306 7.8E-68 T 09-03-2017 RG43_RS15230 33db51ce65725584602a2b0c568fda4c 307 Gene3D G3DSA:3.40.50.720 2 128 8.2E-33 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS15230 33db51ce65725584602a2b0c568fda4c 307 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 121 2.3E-25 T 09-03-2017 IPR000683 Oxidoreductase, N-terminal GO:0016491 RG43_RS11355 4b889729317c5c1a0130a17b40883d7a 219 Pfam PF04391 Protein of unknown function (DUF533) 33 209 9.8E-50 T 09-03-2017 IPR007486 Inner membrane protein YebE RG43_RS11355 4b889729317c5c1a0130a17b40883d7a 219 SUPERFAMILY SSF158682 88 212 2.22E-18 T 09-03-2017 IPR029024 TerB-like RG43_RS11355 4b889729317c5c1a0130a17b40883d7a 219 Gene3D G3DSA:1.10.3680.10 66 212 3.4E-14 T 09-03-2017 IPR029024 TerB-like RG43_RS03915 8c74d913e2fc37c6a6d92d97771b0e31 477 Gene3D G3DSA:3.40.50.620 340 461 6.5E-36 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS03915 8c74d913e2fc37c6a6d92d97771b0e31 477 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 43.584 T 09-03-2017 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 RG43_RS03915 8c74d913e2fc37c6a6d92d97771b0e31 477 SUPERFAMILY SSF53613 12 309 5.14E-60 T 09-03-2017 IPR029056 Ribokinase-like RG43_RS03915 8c74d913e2fc37c6a6d92d97771b0e31 477 Gene3D G3DSA:3.40.1190.20 13 313 1.2E-69 T 09-03-2017 IPR029056 Ribokinase-like RG43_RS03915 8c74d913e2fc37c6a6d92d97771b0e31 477 Pfam PF00294 pfkB family carbohydrate kinase 12 305 4.9E-60 T 09-03-2017 IPR011611 Carbohydrate kinase PfkB RG43_RS03915 8c74d913e2fc37c6a6d92d97771b0e31 477 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 5 312 3.0E-130 T 09-03-2017 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 RG43_RS03915 8c74d913e2fc37c6a6d92d97771b0e31 477 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 09-03-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RG43_RS03915 8c74d913e2fc37c6a6d92d97771b0e31 477 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 473 2.1E-64 T 09-03-2017 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 RG43_RS03915 8c74d913e2fc37c6a6d92d97771b0e31 477 Pfam PF01467 Cytidylyltransferase-like 345 469 3.5E-15 T 09-03-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RG43_RS03915 8c74d913e2fc37c6a6d92d97771b0e31 477 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 5.4E-18 T 09-03-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RG43_RS03915 8c74d913e2fc37c6a6d92d97771b0e31 477 SUPERFAMILY SSF52374 340 471 7.32E-22 T 09-03-2017 RG43_RS26290 8c74d913e2fc37c6a6d92d97771b0e31 477 Gene3D G3DSA:3.40.50.620 340 461 6.5E-36 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS26290 8c74d913e2fc37c6a6d92d97771b0e31 477 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 43.584 T 09-03-2017 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 RG43_RS26290 8c74d913e2fc37c6a6d92d97771b0e31 477 SUPERFAMILY SSF53613 12 309 5.14E-60 T 09-03-2017 IPR029056 Ribokinase-like RG43_RS26290 8c74d913e2fc37c6a6d92d97771b0e31 477 Gene3D G3DSA:3.40.1190.20 13 313 1.2E-69 T 09-03-2017 IPR029056 Ribokinase-like RG43_RS26290 8c74d913e2fc37c6a6d92d97771b0e31 477 Pfam PF00294 pfkB family carbohydrate kinase 12 305 4.9E-60 T 09-03-2017 IPR011611 Carbohydrate kinase PfkB RG43_RS26290 8c74d913e2fc37c6a6d92d97771b0e31 477 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 5 312 3.0E-130 T 09-03-2017 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 RG43_RS26290 8c74d913e2fc37c6a6d92d97771b0e31 477 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 09-03-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RG43_RS26290 8c74d913e2fc37c6a6d92d97771b0e31 477 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 473 2.1E-64 T 09-03-2017 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 RG43_RS26290 8c74d913e2fc37c6a6d92d97771b0e31 477 Pfam PF01467 Cytidylyltransferase-like 345 469 3.5E-15 T 09-03-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RG43_RS26290 8c74d913e2fc37c6a6d92d97771b0e31 477 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 5.4E-18 T 09-03-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RG43_RS26290 8c74d913e2fc37c6a6d92d97771b0e31 477 SUPERFAMILY SSF52374 340 471 7.32E-22 T 09-03-2017 RG43_RS04040 26755ead2d2b760bb3ded213a2bde98b 304 SUPERFAMILY SSF53613 5 302 5.92E-69 T 09-03-2017 IPR029056 Ribokinase-like RG43_RS04040 26755ead2d2b760bb3ded213a2bde98b 304 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 244 257 - T 09-03-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RG43_RS04040 26755ead2d2b760bb3ded213a2bde98b 304 PRINTS PR00990 Ribokinase signature 215 226 4.7E-7 T 09-03-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 RG43_RS04040 26755ead2d2b760bb3ded213a2bde98b 304 PRINTS PR00990 Ribokinase signature 8 29 4.7E-7 T 09-03-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 RG43_RS04040 26755ead2d2b760bb3ded213a2bde98b 304 PRINTS PR00990 Ribokinase signature 35 54 4.7E-7 T 09-03-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 RG43_RS04040 26755ead2d2b760bb3ded213a2bde98b 304 Pfam PF00294 pfkB family carbohydrate kinase 5 292 2.8E-45 T 09-03-2017 IPR011611 Carbohydrate kinase PfkB RG43_RS04040 26755ead2d2b760bb3ded213a2bde98b 304 Gene3D G3DSA:3.40.1190.20 1 303 3.6E-61 T 09-03-2017 IPR029056 Ribokinase-like RG43_RS26415 26755ead2d2b760bb3ded213a2bde98b 304 SUPERFAMILY SSF53613 5 302 5.92E-69 T 09-03-2017 IPR029056 Ribokinase-like RG43_RS26415 26755ead2d2b760bb3ded213a2bde98b 304 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 244 257 - T 09-03-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RG43_RS26415 26755ead2d2b760bb3ded213a2bde98b 304 PRINTS PR00990 Ribokinase signature 215 226 4.7E-7 T 09-03-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 RG43_RS26415 26755ead2d2b760bb3ded213a2bde98b 304 PRINTS PR00990 Ribokinase signature 8 29 4.7E-7 T 09-03-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 RG43_RS26415 26755ead2d2b760bb3ded213a2bde98b 304 PRINTS PR00990 Ribokinase signature 35 54 4.7E-7 T 09-03-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 RG43_RS26415 26755ead2d2b760bb3ded213a2bde98b 304 Pfam PF00294 pfkB family carbohydrate kinase 5 292 2.8E-45 T 09-03-2017 IPR011611 Carbohydrate kinase PfkB RG43_RS26415 26755ead2d2b760bb3ded213a2bde98b 304 Gene3D G3DSA:3.40.1190.20 1 303 3.6E-61 T 09-03-2017 IPR029056 Ribokinase-like RG43_RS00260 a0617601ba14b4df367a2cc3b42c823f 518 Pfam PF00367 phosphotransferase system, EIIB 447 479 9.4E-14 T 09-03-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 RG43_RS00260 a0617601ba14b4df367a2cc3b42c823f 518 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 72 370 7.9E-88 T 09-03-2017 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 RG43_RS00260 a0617601ba14b4df367a2cc3b42c823f 518 SUPERFAMILY SSF55604 444 517 2.22E-21 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RG43_RS00260 a0617601ba14b4df367a2cc3b42c823f 518 Gene3D G3DSA:3.30.1360.60 442 517 4.1E-28 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RG43_RS00260 a0617601ba14b4df367a2cc3b42c823f 518 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 457 474 - T 09-03-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 RG43_RS00260 a0617601ba14b4df367a2cc3b42c823f 518 Pfam PF02378 Phosphotransferase system, EIIC 21 359 7.1E-93 T 09-03-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 RG43_RS00260 a0617601ba14b4df367a2cc3b42c823f 518 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 421 503 2.3E-19 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RG43_RS22170 440a8755baab061aa2c4fe4959d1c8c9 951 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 886 944 4.9E-16 T 09-03-2017 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 RG43_RS22170 440a8755baab061aa2c4fe4959d1c8c9 951 SUPERFAMILY SSF52374 364 571 5.42E-137 T 09-03-2017 RG43_RS22170 440a8755baab061aa2c4fe4959d1c8c9 951 SUPERFAMILY SSF52374 1 192 5.42E-137 T 09-03-2017 RG43_RS22170 440a8755baab061aa2c4fe4959d1c8c9 951 SUPERFAMILY SSF52374 609 641 5.42E-137 T 09-03-2017 RG43_RS22170 440a8755baab061aa2c4fe4959d1c8c9 951 Gene3D G3DSA:1.10.287.380 878 933 7.4E-6 T 09-03-2017 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 RG43_RS22170 440a8755baab061aa2c4fe4959d1c8c9 951 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 949 16.192 T 09-03-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 RG43_RS22170 440a8755baab061aa2c4fe4959d1c8c9 951 Pfam PF08264 Anticodon-binding domain of tRNA 674 824 4.3E-42 T 09-03-2017 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 RG43_RS22170 440a8755baab061aa2c4fe4959d1c8c9 951 Gene3D G3DSA:1.10.730.10 631 816 3.2E-65 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS22170 440a8755baab061aa2c4fe4959d1c8c9 951 SUPERFAMILY SSF50677 191 365 5.23E-57 T 09-03-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 RG43_RS22170 440a8755baab061aa2c4fe4959d1c8c9 951 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 932 0.0 T 09-03-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 RG43_RS22170 440a8755baab061aa2c4fe4959d1c8c9 951 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 631 1.8E-228 T 09-03-2017 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS22170 440a8755baab061aa2c4fe4959d1c8c9 951 PRINTS PR00986 Valyl-tRNA synthetase signature 469 490 1.7E-35 T 09-03-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 RG43_RS22170 440a8755baab061aa2c4fe4959d1c8c9 951 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 1.7E-35 T 09-03-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 RG43_RS22170 440a8755baab061aa2c4fe4959d1c8c9 951 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 1.7E-35 T 09-03-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 RG43_RS22170 440a8755baab061aa2c4fe4959d1c8c9 951 PRINTS PR00986 Valyl-tRNA synthetase signature 500 518 1.7E-35 T 09-03-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 RG43_RS22170 440a8755baab061aa2c4fe4959d1c8c9 951 PRINTS PR00986 Valyl-tRNA synthetase signature 369 382 1.7E-35 T 09-03-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 RG43_RS22170 440a8755baab061aa2c4fe4959d1c8c9 951 SUPERFAMILY SSF47323 642 899 1.42E-70 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS22170 440a8755baab061aa2c4fe4959d1c8c9 951 Gene3D G3DSA:3.40.50.620 364 571 7.2E-142 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS22170 440a8755baab061aa2c4fe4959d1c8c9 951 Gene3D G3DSA:3.40.50.620 3 193 7.2E-142 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS22170 440a8755baab061aa2c4fe4959d1c8c9 951 Gene3D G3DSA:3.40.50.620 609 630 7.2E-142 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS22170 440a8755baab061aa2c4fe4959d1c8c9 951 SUPERFAMILY SSF46589 884 947 6.8E-16 T 09-03-2017 IPR010978 tRNA-binding arm GO:0000166 RG43_RS22170 440a8755baab061aa2c4fe4959d1c8c9 951 Gene3D G3DSA:3.90.740.10 194 360 4.9E-48 T 09-03-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 RG43_RS22170 440a8755baab061aa2c4fe4959d1c8c9 951 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 09-03-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS07155 26cc6f2f2d13d4b7856775afe7ebf4b0 427 Pfam PF12404 Peptidase 5 81 7.8E-34 T 09-03-2017 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 RG43_RS07155 26cc6f2f2d13d4b7856775afe7ebf4b0 427 PIRSF PIRSF036388 1 427 2.4E-238 T 09-03-2017 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 RG43_RS07155 26cc6f2f2d13d4b7856775afe7ebf4b0 427 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 275 282 - T 09-03-2017 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 RG43_RS07155 26cc6f2f2d13d4b7856775afe7ebf4b0 427 PRINTS PR00481 Cytosol aminopeptidase signature 190 207 3.3E-46 T 09-03-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RG43_RS07155 26cc6f2f2d13d4b7856775afe7ebf4b0 427 PRINTS PR00481 Cytosol aminopeptidase signature 249 270 3.3E-46 T 09-03-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RG43_RS07155 26cc6f2f2d13d4b7856775afe7ebf4b0 427 PRINTS PR00481 Cytosol aminopeptidase signature 212 233 3.3E-46 T 09-03-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RG43_RS07155 26cc6f2f2d13d4b7856775afe7ebf4b0 427 PRINTS PR00481 Cytosol aminopeptidase signature 271 291 3.3E-46 T 09-03-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RG43_RS07155 26cc6f2f2d13d4b7856775afe7ebf4b0 427 PRINTS PR00481 Cytosol aminopeptidase signature 299 314 3.3E-46 T 09-03-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RG43_RS07155 26cc6f2f2d13d4b7856775afe7ebf4b0 427 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 109 421 1.8E-100 T 09-03-2017 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 RG43_RS07155 26cc6f2f2d13d4b7856775afe7ebf4b0 427 SUPERFAMILY SSF53187 108 426 9.1E-103 T 09-03-2017 RG43_RS07155 26cc6f2f2d13d4b7856775afe7ebf4b0 427 Hamap MF_00504 Peptidase B [pepB]. 3 427 64.371 T 09-03-2017 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 RG43_RS07155 26cc6f2f2d13d4b7856775afe7ebf4b0 427 Gene3D G3DSA:3.40.630.10 98 426 4.6E-117 T 09-03-2017 RG43_RS00745 61572bd3a2ce6c082296893f429ab780 637 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 8 347 3.9E-192 T 09-03-2017 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 RG43_RS00745 61572bd3a2ce6c082296893f429ab780 637 SUPERFAMILY SSF52794 377 466 5.75E-22 T 09-03-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RG43_RS00745 61572bd3a2ce6c082296893f429ab780 637 Gene3D G3DSA:3.40.50.10370 376 474 3.3E-42 T 09-03-2017 IPR029503 Phosphotransferase system EIIB component, mannitol-specific GO:0009401|GO:0022872 RG43_RS00745 61572bd3a2ce6c082296893f429ab780 637 Gene3D G3DSA:3.40.930.10 497 634 5.2E-44 T 09-03-2017 IPR002178 PTS EIIA type-2 domain RG43_RS00745 61572bd3a2ce6c082296893f429ab780 637 SUPERFAMILY SSF55804 496 634 1.2E-40 T 09-03-2017 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 RG43_RS00745 61572bd3a2ce6c082296893f429ab780 637 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 498 634 8.0E-33 T 09-03-2017 IPR002178 PTS EIIA type-2 domain RG43_RS00745 61572bd3a2ce6c082296893f429ab780 637 Pfam PF02378 Phosphotransferase system, EIIC 17 277 2.0E-20 T 09-03-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 RG43_RS00745 61572bd3a2ce6c082296893f429ab780 637 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 379 453 2.8E-9 T 09-03-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RG43_RS00745 61572bd3a2ce6c082296893f429ab780 637 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 539 555 - T 09-03-2017 IPR002178 PTS EIIA type-2 domain RG43_RS05940 65fa8534717f4498012197a9bedf951b 545 SUPERFAMILY SSF52540 3 269 4.18E-122 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS05940 65fa8534717f4498012197a9bedf951b 545 SUPERFAMILY SSF52317 289 542 2.06E-88 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like RG43_RS05940 65fa8534717f4498012197a9bedf951b 545 Gene3D G3DSA:3.40.50.300 1 280 4.1E-134 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS05940 65fa8534717f4498012197a9bedf951b 545 Gene3D G3DSA:3.40.50.880 288 541 1.7E-97 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like RG43_RS05940 65fa8534717f4498012197a9bedf951b 545 Pfam PF00117 Glutamine amidotransferase class-I 301 535 2.8E-65 T 09-03-2017 IPR017926 Glutamine amidotransferase RG43_RS05940 65fa8534717f4498012197a9bedf951b 545 Pfam PF06418 CTP synthase N-terminus 5 266 5.0E-126 T 09-03-2017 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 RG43_RS05940 65fa8534717f4498012197a9bedf951b 545 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 1.6E-266 T 09-03-2017 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 RG43_RS05940 65fa8534717f4498012197a9bedf951b 545 Hamap MF_01227 CTP synthase [pyrG]. 3 540 50.971 T 09-03-2017 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 RG43_RS25475 9697dece7ffc23f6ca461bc452f22532 139 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 84 1.4E-30 T 09-03-2017 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 RG43_RS25475 9697dece7ffc23f6ca461bc452f22532 139 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 133 1.1E-48 T 09-03-2017 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 RG43_RS25475 9697dece7ffc23f6ca461bc452f22532 139 SUPERFAMILY SSF46604 88 137 1.36E-15 T 09-03-2017 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210 RG43_RS25475 9697dece7ffc23f6ca461bc452f22532 139 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 133 1.1E-13 T 09-03-2017 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210 RG43_RS25475 9697dece7ffc23f6ca461bc452f22532 139 Gene3D G3DSA:1.20.5.440 92 134 2.8E-25 T 09-03-2017 RG43_RS25475 9697dece7ffc23f6ca461bc452f22532 139 SUPERFAMILY SSF51344 3 86 2.09E-25 T 09-03-2017 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 RG43_RS25475 9697dece7ffc23f6ca461bc452f22532 139 Gene3D G3DSA:2.60.15.10 3 91 2.8E-30 T 09-03-2017 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 RG43_RS25475 9697dece7ffc23f6ca461bc452f22532 139 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 90 4.0E-41 T 09-03-2017 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 RG43_RS25475 9697dece7ffc23f6ca461bc452f22532 139 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 131 21.752 T 09-03-2017 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 RG43_RS16370 179713e5450fb6f911296b33259eb6b9 85 Pfam PF00462 Glutaredoxin 4 69 1.6E-17 T 09-03-2017 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 RG43_RS16370 179713e5450fb6f911296b33259eb6b9 85 ProSitePatterns PS00195 Glutaredoxin active site. 5 20 - T 09-03-2017 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 RG43_RS16370 179713e5450fb6f911296b33259eb6b9 85 SUPERFAMILY SSF52833 2 82 1.43E-21 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS16370 179713e5450fb6f911296b33259eb6b9 85 PRINTS PR00160 Glutaredoxin signature 66 79 1.2E-10 T 09-03-2017 IPR014025 Glutaredoxin subgroup RG43_RS16370 179713e5450fb6f911296b33259eb6b9 85 PRINTS PR00160 Glutaredoxin signature 3 21 1.2E-10 T 09-03-2017 IPR014025 Glutaredoxin subgroup RG43_RS16370 179713e5450fb6f911296b33259eb6b9 85 PRINTS PR00160 Glutaredoxin signature 52 65 1.2E-10 T 09-03-2017 IPR014025 Glutaredoxin subgroup RG43_RS16370 179713e5450fb6f911296b33259eb6b9 85 Gene3D G3DSA:3.40.30.10 2 82 4.8E-27 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS16370 179713e5450fb6f911296b33259eb6b9 85 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 3 84 3.1E-45 T 09-03-2017 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 RG43_RS12065 7980ca0ac2930060b820f205bc00a8f7 795 Gene3D G3DSA:3.30.70.380 703 794 1.8E-31 T 09-03-2017 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 RG43_RS12065 7980ca0ac2930060b820f205bc00a8f7 795 Gene3D G3DSA:2.40.50.140 42 154 2.8E-46 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS12065 7980ca0ac2930060b820f205bc00a8f7 795 Pfam PF01588 Putative tRNA binding domain 45 145 1.0E-27 T 09-03-2017 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 RG43_RS12065 7980ca0ac2930060b820f205bc00a8f7 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 1.4E-28 T 09-03-2017 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 RG43_RS12065 7980ca0ac2930060b820f205bc00a8f7 795 Gene3D G3DSA:3.30.56.10 155 183 6.9E-29 T 09-03-2017 RG43_RS12065 7980ca0ac2930060b820f205bc00a8f7 795 Gene3D G3DSA:3.30.56.10 1 38 6.9E-29 T 09-03-2017 RG43_RS12065 7980ca0ac2930060b820f205bc00a8f7 795 SUPERFAMILY SSF55681 467 690 2.53E-55 T 09-03-2017 RG43_RS12065 7980ca0ac2930060b820f205bc00a8f7 795 Gene3D G3DSA:3.30.930.10 496 690 5.8E-66 T 09-03-2017 RG43_RS12065 7980ca0ac2930060b820f205bc00a8f7 795 SUPERFAMILY SSF50249 35 197 4.65E-52 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS12065 7980ca0ac2930060b820f205bc00a8f7 795 SMART SM00896 701 794 9.7E-46 T 09-03-2017 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 RG43_RS12065 7980ca0ac2930060b820f205bc00a8f7 795 Gene3D G3DSA:3.50.40.10 198 392 6.7E-87 T 09-03-2017 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 RG43_RS12065 7980ca0ac2930060b820f205bc00a8f7 795 SUPERFAMILY SSF56037 197 393 7.59E-78 T 09-03-2017 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 RG43_RS12065 7980ca0ac2930060b820f205bc00a8f7 795 SMART SM00874 403 471 1.2E-31 T 09-03-2017 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 RG43_RS12065 7980ca0ac2930060b820f205bc00a8f7 795 SMART SM00873 212 385 1.7E-99 T 09-03-2017 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 RG43_RS12065 7980ca0ac2930060b820f205bc00a8f7 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 50.171 T 09-03-2017 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 RG43_RS12065 7980ca0ac2930060b820f205bc00a8f7 795 SUPERFAMILY SSF54991 696 794 5.23E-31 T 09-03-2017 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 RG43_RS12065 7980ca0ac2930060b820f205bc00a8f7 795 Pfam PF03484 tRNA synthetase B5 domain 405 471 8.0E-21 T 09-03-2017 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 RG43_RS12065 7980ca0ac2930060b820f205bc00a8f7 795 Gene3D G3DSA:3.30.56.20 402 475 2.2E-29 T 09-03-2017 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 RG43_RS12065 7980ca0ac2930060b820f205bc00a8f7 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 1.2E-303 T 09-03-2017 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 RG43_RS12065 7980ca0ac2930060b820f205bc00a8f7 795 SUPERFAMILY SSF46955 403 475 2.93E-21 T 09-03-2017 IPR009061 Putative DNA-binding domain RG43_RS12065 7980ca0ac2930060b820f205bc00a8f7 795 Pfam PF03483 B3/4 domain 212 385 1.6E-71 T 09-03-2017 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 RG43_RS24040 3faaf04ac32aa9f011aededcf71aa811 517 SUPERFAMILY SSF55816 326 515 4.71E-50 T 09-03-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS24040 3faaf04ac32aa9f011aededcf71aa811 517 PRINTS PR01607 Apyrase family signature 450 469 9.0E-22 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS24040 3faaf04ac32aa9f011aededcf71aa811 517 PRINTS PR01607 Apyrase family signature 380 403 9.0E-22 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS24040 3faaf04ac32aa9f011aededcf71aa811 517 PRINTS PR01607 Apyrase family signature 200 217 9.0E-22 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS24040 3faaf04ac32aa9f011aededcf71aa811 517 PRINTS PR01607 Apyrase family signature 235 258 9.0E-22 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS24040 3faaf04ac32aa9f011aededcf71aa811 517 PRINTS PR01607 Apyrase family signature 21 39 9.0E-22 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS24040 3faaf04ac32aa9f011aededcf71aa811 517 SUPERFAMILY SSF56300 21 326 2.24E-73 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like RG43_RS24040 3faaf04ac32aa9f011aededcf71aa811 517 Gene3D G3DSA:3.60.21.10 16 333 2.0E-79 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like RG43_RS24040 3faaf04ac32aa9f011aededcf71aa811 517 ProSitePatterns PS00786 5'-nucleotidase signature 2. 102 113 - T 09-03-2017 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS24040 3faaf04ac32aa9f011aededcf71aa811 517 Pfam PF00149 Calcineurin-like phosphoesterase 24 252 9.2E-12 T 09-03-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RG43_RS24040 3faaf04ac32aa9f011aededcf71aa811 517 Pfam PF02872 5'-nucleotidase, C-terminal domain 336 476 4.2E-40 T 09-03-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS24040 3faaf04ac32aa9f011aededcf71aa811 517 Gene3D G3DSA:3.90.780.10 334 513 3.5E-49 T 09-03-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS21715 75317e6add306fb74e1b6394237d64db 529 Gene3D G3DSA:3.40.50.300 9 283 1.2E-64 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS21715 75317e6add306fb74e1b6394237d64db 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 4.9E-47 T 09-03-2017 IPR032090 Peptide chain release factor 3, C-terminal RG43_RS21715 75317e6add306fb74e1b6394237d64db 529 Gene3D G3DSA:3.30.70.870 395 463 7.6E-14 T 09-03-2017 RG43_RS21715 75317e6add306fb74e1b6394237d64db 529 SUPERFAMILY SSF54980 393 468 2.52E-17 T 09-03-2017 IPR009022 Elongation factor G, III-V domain RG43_RS21715 75317e6add306fb74e1b6394237d64db 529 PRINTS PR00315 GTP-binding elongation factor signature 101 112 6.6E-11 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RG43_RS21715 75317e6add306fb74e1b6394237d64db 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 6.6E-11 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RG43_RS21715 75317e6add306fb74e1b6394237d64db 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 6.6E-11 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RG43_RS21715 75317e6add306fb74e1b6394237d64db 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 6.6E-11 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RG43_RS21715 75317e6add306fb74e1b6394237d64db 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 6.6E-11 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RG43_RS21715 75317e6add306fb74e1b6394237d64db 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 1.1E-46 T 09-03-2017 RG43_RS21715 75317e6add306fb74e1b6394237d64db 529 SUPERFAMILY SSF52540 10 277 8.73E-85 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS21715 75317e6add306fb74e1b6394237d64db 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 09-03-2017 IPR031157 Tr-type G domain, conserved site RG43_RS21715 75317e6add306fb74e1b6394237d64db 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 3 529 0.0 T 09-03-2017 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 RG43_RS21715 75317e6add306fb74e1b6394237d64db 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 3.5E-11 T 09-03-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 RG43_RS21715 75317e6add306fb74e1b6394237d64db 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 52.615 T 09-03-2017 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 RG43_RS21715 75317e6add306fb74e1b6394237d64db 529 SUPERFAMILY SSF50447 262 393 2.03E-27 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain RG43_RS21715 75317e6add306fb74e1b6394237d64db 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 156 1.5E-18 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 RG43_RS21715 75317e6add306fb74e1b6394237d64db 529 Gene3D G3DSA:2.40.30.10 293 394 9.5E-24 T 09-03-2017 RG43_RS14670 13c3cbd114ddbae1ede687a63b3d3b87 139 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 52 62 5.2E-12 T 09-03-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 RG43_RS14670 13c3cbd114ddbae1ede687a63b3d3b87 139 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 63 74 5.2E-12 T 09-03-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 RG43_RS14670 13c3cbd114ddbae1ede687a63b3d3b87 139 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 91 103 5.2E-12 T 09-03-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 RG43_RS14670 13c3cbd114ddbae1ede687a63b3d3b87 139 SUPERFAMILY SSF51306 13 135 2.79E-34 T 09-03-2017 IPR015927 Peptidase S24/S26A/S26B/S26C RG43_RS14670 13c3cbd114ddbae1ede687a63b3d3b87 139 Pfam PF00717 Peptidase S24-like 57 120 3.7E-11 T 09-03-2017 IPR019759 Peptidase S24/S26A/S26B RG43_RS14670 13c3cbd114ddbae1ede687a63b3d3b87 139 Gene3D G3DSA:2.10.109.10 25 138 2.9E-48 T 09-03-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain RG43_RS14655 4f77f1bd5f3cf8dac38782a3aadf81f6 513 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 512 0.0 T 09-03-2017 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 RG43_RS14655 4f77f1bd5f3cf8dac38782a3aadf81f6 513 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 513 368.151 T 09-03-2017 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 RG43_RS14655 4f77f1bd5f3cf8dac38782a3aadf81f6 513 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 511 0.0 T 09-03-2017 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 RG43_RS07675 a32c87a55020590a1aada3a2cc2f5f25 671 Pfam PF14520 Helix-hairpin-helix domain 446 502 1.4E-5 T 09-03-2017 RG43_RS07675 a32c87a55020590a1aada3a2cc2f5f25 671 Gene3D G3DSA:1.10.287.610 1 67 1.7E-30 T 09-03-2017 RG43_RS07675 a32c87a55020590a1aada3a2cc2f5f25 671 Gene3D G3DSA:1.10.150.20 504 584 6.0E-32 T 09-03-2017 RG43_RS07675 a32c87a55020590a1aada3a2cc2f5f25 671 SMART SM00532 3 448 3.2E-297 T 09-03-2017 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 RG43_RS07675 a32c87a55020590a1aada3a2cc2f5f25 671 SUPERFAMILY SSF47781 403 583 8.15E-62 T 09-03-2017 IPR010994 RuvA domain 2-like RG43_RS07675 a32c87a55020590a1aada3a2cc2f5f25 671 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 331 346 - T 09-03-2017 IPR033136 NAD-dependent DNA ligase, conserved site RG43_RS07675 a32c87a55020590a1aada3a2cc2f5f25 671 SMART SM00278 446 465 24.0 T 09-03-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RG43_RS07675 a32c87a55020590a1aada3a2cc2f5f25 671 SMART SM00278 480 499 0.59 T 09-03-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RG43_RS07675 a32c87a55020590a1aada3a2cc2f5f25 671 SMART SM00278 512 531 600.0 T 09-03-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RG43_RS07675 a32c87a55020590a1aada3a2cc2f5f25 671 SMART SM00278 544 563 38.0 T 09-03-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RG43_RS07675 a32c87a55020590a1aada3a2cc2f5f25 671 SUPERFAMILY SSF52113 596 669 5.23E-19 T 09-03-2017 IPR001357 BRCT domain RG43_RS07675 a32c87a55020590a1aada3a2cc2f5f25 671 Hamap MF_01588 DNA ligase [ligA]. 2 669 55.1 T 09-03-2017 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 RG43_RS07675 a32c87a55020590a1aada3a2cc2f5f25 671 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 115 144 - T 09-03-2017 IPR018239 NAD-dependent DNA ligase, active site RG43_RS07675 a32c87a55020590a1aada3a2cc2f5f25 671 PIRSF PIRSF001604 1 671 6.4E-257 T 09-03-2017 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 RG43_RS07675 a32c87a55020590a1aada3a2cc2f5f25 671 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 11 665 3.8E-279 T 09-03-2017 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 RG43_RS07675 a32c87a55020590a1aada3a2cc2f5f25 671 Gene3D G3DSA:2.40.50.140 319 391 1.1E-34 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS07675 a32c87a55020590a1aada3a2cc2f5f25 671 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 407 434 3.9E-11 T 09-03-2017 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 RG43_RS07675 a32c87a55020590a1aada3a2cc2f5f25 671 SMART SM00292 595 670 3.8E-14 T 09-03-2017 IPR001357 BRCT domain RG43_RS07675 a32c87a55020590a1aada3a2cc2f5f25 671 Pfam PF12826 Helix-hairpin-helix motif 510 573 4.2E-23 T 09-03-2017 RG43_RS07675 a32c87a55020590a1aada3a2cc2f5f25 671 Gene3D G3DSA:3.40.50.10190 594 669 4.6E-26 T 09-03-2017 IPR001357 BRCT domain RG43_RS07675 a32c87a55020590a1aada3a2cc2f5f25 671 Gene3D G3DSA:3.30.470.30 119 252 1.1E-50 T 09-03-2017 RG43_RS07675 a32c87a55020590a1aada3a2cc2f5f25 671 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 322 398 8.3E-36 T 09-03-2017 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 RG43_RS07675 a32c87a55020590a1aada3a2cc2f5f25 671 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 596 669 5.4E-14 T 09-03-2017 IPR001357 BRCT domain RG43_RS07675 a32c87a55020590a1aada3a2cc2f5f25 671 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 3 318 7.3E-143 T 09-03-2017 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 RG43_RS07675 a32c87a55020590a1aada3a2cc2f5f25 671 SUPERFAMILY SSF56091 2 316 2.88E-124 T 09-03-2017 RG43_RS07675 a32c87a55020590a1aada3a2cc2f5f25 671 Gene3D G3DSA:1.10.150.20 435 502 2.4E-28 T 09-03-2017 RG43_RS07675 a32c87a55020590a1aada3a2cc2f5f25 671 SUPERFAMILY SSF50249 318 400 8.74E-29 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS22310 6b35dd90051a99c50a20aa701f4f85c3 457 Gene3D G3DSA:3.40.50.720 1 90 5.7E-41 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS22310 6b35dd90051a99c50a20aa701f4f85c3 457 Pfam PF02875 Mur ligase family, glutamate ligase domain 312 361 7.2E-10 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 RG43_RS22310 6b35dd90051a99c50a20aa701f4f85c3 457 Gene3D G3DSA:3.90.190.20 313 449 2.1E-37 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 RG43_RS22310 6b35dd90051a99c50a20aa701f4f85c3 457 Pfam PF01225 Mur ligase family, catalytic domain 2 101 4.7E-20 T 09-03-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 RG43_RS22310 6b35dd90051a99c50a20aa701f4f85c3 457 SUPERFAMILY SSF53623 95 308 1.44E-48 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RG43_RS22310 6b35dd90051a99c50a20aa701f4f85c3 457 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 2.3E-276 T 09-03-2017 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 RG43_RS22310 6b35dd90051a99c50a20aa701f4f85c3 457 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 450 59.577 T 09-03-2017 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 RG43_RS22310 6b35dd90051a99c50a20aa701f4f85c3 457 Gene3D G3DSA:3.40.1190.10 92 312 2.9E-83 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RG43_RS22310 6b35dd90051a99c50a20aa701f4f85c3 457 SUPERFAMILY SSF53244 312 447 4.45E-37 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 RG43_RS22310 6b35dd90051a99c50a20aa701f4f85c3 457 Pfam PF08245 Mur ligase middle domain 108 291 2.6E-18 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RG43_RS22310 6b35dd90051a99c50a20aa701f4f85c3 457 SUPERFAMILY SSF51984 1 90 1.31E-24 T 09-03-2017 RG43_RS23480 fc77389991a733375e34350494af990a 514 Gene3D G3DSA:1.20.58.370 2 95 1.4E-39 T 09-03-2017 RG43_RS23480 fc77389991a733375e34350494af990a 514 Gene3D G3DSA:2.40.430.10 120 195 5.2E-39 T 09-03-2017 RG43_RS23480 fc77389991a733375e34350494af990a 514 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 100 260 2.3E-58 T 09-03-2017 IPR029345 Maltose transport system permease protein MalF, P2 domain RG43_RS23480 fc77389991a733375e34350494af990a 514 Gene3D G3DSA:3.10.650.10 196 269 8.1E-40 T 09-03-2017 RG43_RS23480 fc77389991a733375e34350494af990a 514 Gene3D G3DSA:1.10.3720.10 275 510 5.4E-63 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS23480 fc77389991a733375e34350494af990a 514 SUPERFAMILY SSF161098 261 503 1.23E-60 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS23480 fc77389991a733375e34350494af990a 514 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 298 501 6.0E-22 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS23480 fc77389991a733375e34350494af990a 514 SUPERFAMILY SSF160964 15 260 1.03E-89 T 09-03-2017 RG43_RS21330 61913914683c9ecef01d172aaaa9153e 176 SUPERFAMILY SSF52218 2 170 9.54E-47 T 09-03-2017 IPR029039 Flavoprotein-like domain RG43_RS21330 61913914683c9ecef01d172aaaa9153e 176 Hamap MF_01414 Glutathione-regulated potassium-efflux system ancillary protein KefF [kefF]. 1 173 54.28 T 09-03-2017 IPR023948 Glutathione-regulated potassium-efflux system ancillary protein KefF GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 RG43_RS21330 61913914683c9ecef01d172aaaa9153e 176 Pfam PF02525 Flavodoxin-like fold 2 167 4.3E-41 T 09-03-2017 IPR003680 Flavodoxin-like fold RG43_RS21330 61913914683c9ecef01d172aaaa9153e 176 Gene3D G3DSA:3.40.50.360 2 171 2.9E-47 T 09-03-2017 IPR029039 Flavoprotein-like domain RG43_RS01015 93d35af0511ffd3a2467b962228bd45e 563 Pfam PF00884 Sulfatase 250 538 1.4E-49 T 09-03-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RG43_RS01015 93d35af0511ffd3a2467b962228bd45e 563 Gene3D G3DSA:3.40.720.10 250 543 4.6E-15 T 09-03-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RG43_RS01015 93d35af0511ffd3a2467b962228bd45e 563 Pfam PF08019 Domain of unknown function (DUF1705) 57 172 1.4E-18 T 09-03-2017 IPR012549 Domain of unknown function DUF1705 GO:0016021 RG43_RS01015 93d35af0511ffd3a2467b962228bd45e 563 SUPERFAMILY SSF53649 250 542 5.05E-20 T 09-03-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RG43_RS00415 2f4d2615a7ad17a67bb94925acef3c3a 517 SUPERFAMILY SSF46785 2 48 2.57E-6 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS00415 2f4d2615a7ad17a67bb94925acef3c3a 517 Pfam PF08279 HTH domain 7 63 1.7E-8 T 09-03-2017 IPR013196 Helix-turn-helix, type 11 RG43_RS00415 2f4d2615a7ad17a67bb94925acef3c3a 517 SUPERFAMILY SSF63520 314 417 5.36E-20 T 09-03-2017 IPR011608 PRD domain GO:0006355 RG43_RS00415 2f4d2615a7ad17a67bb94925acef3c3a 517 Pfam PF00874 PRD domain 324 413 2.0E-17 T 09-03-2017 IPR011608 PRD domain GO:0006355 RG43_RS00415 2f4d2615a7ad17a67bb94925acef3c3a 517 Pfam PF00874 PRD domain 209 294 5.8E-10 T 09-03-2017 IPR011608 PRD domain GO:0006355 RG43_RS00415 2f4d2615a7ad17a67bb94925acef3c3a 517 Gene3D G3DSA:1.10.10.10 1 67 6.3E-10 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS00415 2f4d2615a7ad17a67bb94925acef3c3a 517 Gene3D G3DSA:1.10.10.10 92 153 8.7E-4 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS00415 2f4d2615a7ad17a67bb94925acef3c3a 517 Gene3D G3DSA:1.10.1790.10 318 417 8.3E-21 T 09-03-2017 IPR011608 PRD domain GO:0006355 RG43_RS00415 2f4d2615a7ad17a67bb94925acef3c3a 517 Gene3D G3DSA:1.10.1790.10 199 294 5.4E-14 T 09-03-2017 IPR011608 PRD domain GO:0006355 RG43_RS00415 2f4d2615a7ad17a67bb94925acef3c3a 517 SUPERFAMILY SSF63520 191 294 2.75E-18 T 09-03-2017 IPR011608 PRD domain GO:0006355 RG43_RS00415 2f4d2615a7ad17a67bb94925acef3c3a 517 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 422 477 9.7E-5 T 09-03-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RG43_RS00415 2f4d2615a7ad17a67bb94925acef3c3a 517 SUPERFAMILY SSF52794 421 501 1.46E-11 T 09-03-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RG43_RS00415 2f4d2615a7ad17a67bb94925acef3c3a 517 Gene3D G3DSA:3.40.50.270 421 503 2.0E-9 T 09-03-2017 RG43_RS00415 2f4d2615a7ad17a67bb94925acef3c3a 517 Pfam PF05043 Mga helix-turn-helix domain 99 169 2.1E-6 T 09-03-2017 IPR007737 Mga helix-turn-helix domain RG43_RS24860 89f3aea0517086f53e892809582abde4 255 Gene3D G3DSA:1.10.10.10 10 79 7.5E-13 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS24860 89f3aea0517086f53e892809582abde4 255 SUPERFAMILY SSF55781 75 247 1.77E-43 T 09-03-2017 IPR029016 GAF domain-like RG43_RS24860 89f3aea0517086f53e892809582abde4 255 Gene3D G3DSA:3.30.450.40 80 248 1.3E-52 T 09-03-2017 IPR029016 GAF domain-like RG43_RS24860 89f3aea0517086f53e892809582abde4 255 Pfam PF01614 Bacterial transcriptional regulator 128 243 3.3E-21 T 09-03-2017 IPR014757 Transcription regulator IclR, C-terminal RG43_RS24860 89f3aea0517086f53e892809582abde4 255 SUPERFAMILY SSF46785 12 82 2.69E-11 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS24860 89f3aea0517086f53e892809582abde4 255 Pfam PF09339 IclR helix-turn-helix domain 14 61 3.1E-7 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RG43_RS24860 89f3aea0517086f53e892809582abde4 255 SMART SM00346 11 98 3.8E-18 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RG43_RS21555 1917eff55d421295934a3e3ab9e8c178 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 232 2.4E-18 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RG43_RS21555 1917eff55d421295934a3e3ab9e8c178 238 SMART SM00862 156 232 3.7E-15 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RG43_RS21555 1917eff55d421295934a3e3ab9e8c178 238 SUPERFAMILY SSF52172 2 126 2.85E-36 T 09-03-2017 IPR011006 CheY-like superfamily RG43_RS21555 1917eff55d421295934a3e3ab9e8c178 238 Pfam PF00072 Response regulator receiver domain 6 113 8.3E-27 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS21555 1917eff55d421295934a3e3ab9e8c178 238 SUPERFAMILY SSF46894 136 234 7.65E-22 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RG43_RS21555 1917eff55d421295934a3e3ab9e8c178 238 SMART SM00448 4 114 6.3E-38 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS21555 1917eff55d421295934a3e3ab9e8c178 238 Gene3D G3DSA:3.40.50.2300 2 123 1.8E-35 T 09-03-2017 RG43_RS21555 1917eff55d421295934a3e3ab9e8c178 238 Gene3D G3DSA:1.10.10.10 135 233 1.7E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS04110 85b662b2e5cee3fdfbd640c0d11e4c11 449 SMART SM00388 236 302 8.1E-15 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS04110 85b662b2e5cee3fdfbd640c0d11e4c11 449 SUPERFAMILY SSF47384 219 301 1.96E-15 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS04110 85b662b2e5cee3fdfbd640c0d11e4c11 449 Pfam PF08521 Two-component sensor kinase N-terminal 23 158 1.7E-7 T 09-03-2017 IPR013727 Two-component sensor kinase, N-terminal RG43_RS04110 85b662b2e5cee3fdfbd640c0d11e4c11 449 Gene3D G3DSA:1.10.287.130 231 298 3.3E-12 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS04110 85b662b2e5cee3fdfbd640c0d11e4c11 449 SUPERFAMILY SSF55874 291 447 1.96E-29 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS04110 85b662b2e5cee3fdfbd640c0d11e4c11 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 395 2.4E-5 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS04110 85b662b2e5cee3fdfbd640c0d11e4c11 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 431 2.4E-5 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS04110 85b662b2e5cee3fdfbd640c0d11e4c11 449 Gene3D G3DSA:3.30.565.10 310 448 1.0E-28 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS04110 85b662b2e5cee3fdfbd640c0d11e4c11 449 Gene3D G3DSA:1.20.5.1040 2 84 7.0E-27 T 09-03-2017 RG43_RS04110 85b662b2e5cee3fdfbd640c0d11e4c11 449 Gene3D G3DSA:1.20.5.1040 101 185 1.5E-33 T 09-03-2017 RG43_RS04110 85b662b2e5cee3fdfbd640c0d11e4c11 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 352 442 2.1E-16 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS04110 85b662b2e5cee3fdfbd640c0d11e4c11 449 Pfam PF00512 His Kinase A (phospho-acceptor) domain 238 301 3.6E-12 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS04110 85b662b2e5cee3fdfbd640c0d11e4c11 449 SMART SM00387 348 449 1.1E-20 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS26485 85b662b2e5cee3fdfbd640c0d11e4c11 449 SMART SM00388 236 302 8.1E-15 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS26485 85b662b2e5cee3fdfbd640c0d11e4c11 449 SUPERFAMILY SSF47384 219 301 1.96E-15 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS26485 85b662b2e5cee3fdfbd640c0d11e4c11 449 Pfam PF08521 Two-component sensor kinase N-terminal 23 158 1.7E-7 T 09-03-2017 IPR013727 Two-component sensor kinase, N-terminal RG43_RS26485 85b662b2e5cee3fdfbd640c0d11e4c11 449 Gene3D G3DSA:1.10.287.130 231 298 3.3E-12 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS26485 85b662b2e5cee3fdfbd640c0d11e4c11 449 SUPERFAMILY SSF55874 291 447 1.96E-29 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS26485 85b662b2e5cee3fdfbd640c0d11e4c11 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 395 2.4E-5 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS26485 85b662b2e5cee3fdfbd640c0d11e4c11 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 431 2.4E-5 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS26485 85b662b2e5cee3fdfbd640c0d11e4c11 449 Gene3D G3DSA:3.30.565.10 310 448 1.0E-28 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS26485 85b662b2e5cee3fdfbd640c0d11e4c11 449 Gene3D G3DSA:1.20.5.1040 2 84 7.0E-27 T 09-03-2017 RG43_RS26485 85b662b2e5cee3fdfbd640c0d11e4c11 449 Gene3D G3DSA:1.20.5.1040 101 185 1.5E-33 T 09-03-2017 RG43_RS26485 85b662b2e5cee3fdfbd640c0d11e4c11 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 352 442 2.1E-16 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS26485 85b662b2e5cee3fdfbd640c0d11e4c11 449 Pfam PF00512 His Kinase A (phospho-acceptor) domain 238 301 3.6E-12 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS26485 85b662b2e5cee3fdfbd640c0d11e4c11 449 SMART SM00387 348 449 1.1E-20 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS15025 5c96612253d5137046f0005b72e1e632 265 SUPERFAMILY SSF51556 1 259 8.52E-89 T 09-03-2017 IPR032466 Metal-dependent hydrolase RG43_RS15025 5c96612253d5137046f0005b72e1e632 265 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 09-03-2017 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 RG43_RS15025 5c96612253d5137046f0005b72e1e632 265 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 256 3.4E-97 T 09-03-2017 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 RG43_RS15025 5c96612253d5137046f0005b72e1e632 265 Gene3D G3DSA:3.20.20.140 2 257 2.5E-86 T 09-03-2017 RG43_RS15025 5c96612253d5137046f0005b72e1e632 265 PIRSF PIRSF005902 1 259 2.4E-75 T 09-03-2017 IPR001130 TatD family GO:0016788 RG43_RS15025 5c96612253d5137046f0005b72e1e632 265 Pfam PF01026 TatD related DNase 4 255 1.3E-76 T 09-03-2017 IPR001130 TatD family GO:0016788 RG43_RS15025 5c96612253d5137046f0005b72e1e632 265 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 09-03-2017 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 RG43_RS25060 4b6949c8ccdfec49489082e4f8b4deb1 298 SUPERFAMILY SSF56349 107 292 2.85E-54 T 09-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RG43_RS25060 4b6949c8ccdfec49489082e4f8b4deb1 298 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 8 90 1.5E-26 T 09-03-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RG43_RS25060 4b6949c8ccdfec49489082e4f8b4deb1 298 Gene3D G3DSA:1.10.443.10 115 287 1.7E-52 T 09-03-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RG43_RS25060 4b6949c8ccdfec49489082e4f8b4deb1 298 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 6 294 58.66 T 09-03-2017 IPR023009 Tyrosine recombinase XerC/XerD RG43_RS25060 4b6949c8ccdfec49489082e4f8b4deb1 298 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 9 296 1.9E-111 T 09-03-2017 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 RG43_RS25060 4b6949c8ccdfec49489082e4f8b4deb1 298 Gene3D G3DSA:1.10.150.130 5 101 5.7E-25 T 09-03-2017 IPR023109 Integrase/recombinase, N-terminal RG43_RS25060 4b6949c8ccdfec49489082e4f8b4deb1 298 Pfam PF00589 Phage integrase family 113 280 1.4E-52 T 09-03-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RG43_RS25060 4b6949c8ccdfec49489082e4f8b4deb1 298 SUPERFAMILY SSF47823 6 98 2.16E-11 T 09-03-2017 IPR010998 Integrase, Lambda-type, N-terminal RG43_RS01150 08373667c0edd3cb0146ce80ca03d80d 872 SUPERFAMILY SSF53448 275 553 1.91E-50 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS01150 08373667c0edd3cb0146ce80ca03d80d 872 Pfam PF00535 Glycosyl transferase family 2 276 446 1.1E-34 T 09-03-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RG43_RS01150 08373667c0edd3cb0146ce80ca03d80d 872 PRINTS PR01439 Cellulose synthase subunit A signature 199 219 7.7E-56 T 09-03-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 RG43_RS01150 08373667c0edd3cb0146ce80ca03d80d 872 PRINTS PR01439 Cellulose synthase subunit A signature 667 688 7.7E-56 T 09-03-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 RG43_RS01150 08373667c0edd3cb0146ce80ca03d80d 872 PRINTS PR01439 Cellulose synthase subunit A signature 227 252 7.7E-56 T 09-03-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 RG43_RS01150 08373667c0edd3cb0146ce80ca03d80d 872 PRINTS PR01439 Cellulose synthase subunit A signature 363 387 7.7E-56 T 09-03-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 RG43_RS01150 08373667c0edd3cb0146ce80ca03d80d 872 PRINTS PR01439 Cellulose synthase subunit A signature 593 612 7.7E-56 T 09-03-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 RG43_RS01150 08373667c0edd3cb0146ce80ca03d80d 872 PRINTS PR01439 Cellulose synthase subunit A signature 282 301 7.7E-56 T 09-03-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 RG43_RS01150 08373667c0edd3cb0146ce80ca03d80d 872 PRINTS PR01439 Cellulose synthase subunit A signature 524 550 7.7E-56 T 09-03-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 RG43_RS01150 08373667c0edd3cb0146ce80ca03d80d 872 PRINTS PR01439 Cellulose synthase subunit A signature 553 572 7.7E-56 T 09-03-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 RG43_RS01150 08373667c0edd3cb0146ce80ca03d80d 872 Pfam PF03552 Cellulose synthase 451 664 1.5E-12 T 09-03-2017 IPR005150 Cellulose synthase GO:0016020|GO:0016760|GO:0030244 RG43_RS01150 08373667c0edd3cb0146ce80ca03d80d 872 SUPERFAMILY SSF141371 695 779 6.47E-8 T 09-03-2017 RG43_RS01150 08373667c0edd3cb0146ce80ca03d80d 872 Gene3D G3DSA:3.90.550.10 273 507 1.1E-21 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS01150 08373667c0edd3cb0146ce80ca03d80d 872 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 147 830 0.0 T 09-03-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 RG43_RS01150 08373667c0edd3cb0146ce80ca03d80d 872 Pfam PF07238 PilZ domain 694 790 2.6E-12 T 09-03-2017 IPR009875 PilZ domain GO:0035438 RG43_RS06590 387fb9d86a7bd039b96de088cbc66e3b 325 Gene3D G3DSA:3.60.130.10 16 325 1.3E-136 T 09-03-2017 RG43_RS06590 387fb9d86a7bd039b96de088cbc66e3b 325 ProDom PD135861 METAL-BINDING IRON CSID GAB CYTOPLASMIC 3D-STRUCTURE HOMOLOG DIRECT SEQUENCING 16 314 3.0E-160 T 09-03-2017 IPR015038 Uncharacterised protein family CsiD GO:0005506 RG43_RS06590 387fb9d86a7bd039b96de088cbc66e3b 325 SUPERFAMILY SSF51197 17 321 1.05E-93 T 09-03-2017 RG43_RS06590 387fb9d86a7bd039b96de088cbc66e3b 325 Hamap MF_01083 Protein CsiD [csiD]. 1 325 77.988 T 09-03-2017 IPR015038 Uncharacterised protein family CsiD GO:0005506 RG43_RS06590 387fb9d86a7bd039b96de088cbc66e3b 325 Pfam PF08943 CsiD 21 314 2.4E-148 T 09-03-2017 IPR015038 Uncharacterised protein family CsiD GO:0005506 RG43_RS16975 b1569c786792077aa544606cc47a4b36 365 Gene3D G3DSA:2.40.160.10 24 365 4.3E-107 T 09-03-2017 IPR023614 Porin domain RG43_RS16975 b1569c786792077aa544606cc47a4b36 365 SUPERFAMILY SSF56935 24 365 4.27E-86 T 09-03-2017 RG43_RS16975 b1569c786792077aa544606cc47a4b36 365 Pfam PF00267 Gram-negative porin 29 365 2.6E-157 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RG43_RS16975 b1569c786792077aa544606cc47a4b36 365 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 317 333 - T 09-03-2017 IPR013793 Porin, Gram-negative type, conserved site RG43_RS16975 b1569c786792077aa544606cc47a4b36 365 PRINTS PR00183 E.coli/Salmonella-type porin signature 153 175 1.2E-72 T 09-03-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 RG43_RS16975 b1569c786792077aa544606cc47a4b36 365 PRINTS PR00183 E.coli/Salmonella-type porin signature 98 120 1.2E-72 T 09-03-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 RG43_RS16975 b1569c786792077aa544606cc47a4b36 365 PRINTS PR00183 E.coli/Salmonella-type porin signature 244 261 1.2E-72 T 09-03-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 RG43_RS16975 b1569c786792077aa544606cc47a4b36 365 PRINTS PR00183 E.coli/Salmonella-type porin signature 24 40 1.2E-72 T 09-03-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 RG43_RS16975 b1569c786792077aa544606cc47a4b36 365 PRINTS PR00183 E.coli/Salmonella-type porin signature 273 292 1.2E-72 T 09-03-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 RG43_RS16975 b1569c786792077aa544606cc47a4b36 365 PRINTS PR00183 E.coli/Salmonella-type porin signature 53 71 1.2E-72 T 09-03-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 RG43_RS16975 b1569c786792077aa544606cc47a4b36 365 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 317 334 9.3E-20 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RG43_RS16975 b1569c786792077aa544606cc47a4b36 365 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 155 166 9.3E-20 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RG43_RS16975 b1569c786792077aa544606cc47a4b36 365 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 54 65 9.3E-20 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RG43_RS16975 b1569c786792077aa544606cc47a4b36 365 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 238 250 9.3E-20 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RG43_RS16975 b1569c786792077aa544606cc47a4b36 365 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 98 108 9.3E-20 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RG43_RS08755 c3ddf6d5d7405a07c46400ebc529a9d6 828 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 40 92 3.2E-17 T 09-03-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08755 c3ddf6d5d7405a07c46400ebc529a9d6 828 SMART SM00926 39 93 4.0E-14 T 09-03-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08755 c3ddf6d5d7405a07c46400ebc529a9d6 828 Gene3D G3DSA:2.20.25.90 37 95 2.7E-20 T 09-03-2017 RG43_RS08755 c3ddf6d5d7405a07c46400ebc529a9d6 828 SUPERFAMILY SSF53706 37 700 2.09E-204 T 09-03-2017 RG43_RS08755 c3ddf6d5d7405a07c46400ebc529a9d6 828 Hamap MF_01630 Nitrate reductase [napA]. 1 828 30.857 T 09-03-2017 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 RG43_RS08755 c3ddf6d5d7405a07c46400ebc529a9d6 828 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 31 1.3E-4 T 09-03-2017 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RG43_RS08755 c3ddf6d5d7405a07c46400ebc529a9d6 828 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 44 61 - T 09-03-2017 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 RG43_RS08755 c3ddf6d5d7405a07c46400ebc529a9d6 828 Gene3D G3DSA:3.40.50.740 96 178 1.2E-78 T 09-03-2017 RG43_RS08755 c3ddf6d5d7405a07c46400ebc529a9d6 828 Gene3D G3DSA:3.40.50.740 399 575 1.2E-78 T 09-03-2017 RG43_RS08755 c3ddf6d5d7405a07c46400ebc529a9d6 828 Gene3D G3DSA:3.40.50.740 621 665 1.2E-78 T 09-03-2017 RG43_RS08755 c3ddf6d5d7405a07c46400ebc529a9d6 828 SUPERFAMILY SSF50692 688 828 1.06E-41 T 09-03-2017 IPR009010 Aspartate decarboxylase-like domain RG43_RS08755 c3ddf6d5d7405a07c46400ebc529a9d6 828 Pfam PF01568 Molydopterin dinucleotide binding domain 714 822 1.8E-24 T 09-03-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RG43_RS08755 c3ddf6d5d7405a07c46400ebc529a9d6 828 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 2 828 0.0 T 09-03-2017 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 RG43_RS08755 c3ddf6d5d7405a07c46400ebc529a9d6 828 Pfam PF00384 Molybdopterin oxidoreductase 96 567 8.6E-92 T 09-03-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08755 c3ddf6d5d7405a07c46400ebc529a9d6 828 Gene3D G3DSA:2.40.40.20 666 828 3.3E-46 T 09-03-2017 RG43_RS08755 c3ddf6d5d7405a07c46400ebc529a9d6 828 Gene3D G3DSA:3.40.228.10 325 398 2.3E-57 T 09-03-2017 RG43_RS08755 c3ddf6d5d7405a07c46400ebc529a9d6 828 Gene3D G3DSA:3.40.228.10 179 291 2.3E-57 T 09-03-2017 RG43_RS11760 adec9c8c296a076912033969d932bc85 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 09-03-2017 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS11760 adec9c8c296a076912033969d932bc85 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 150 1.7E-59 T 09-03-2017 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS11760 adec9c8c296a076912033969d932bc85 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 7.6E-48 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS11760 adec9c8c296a076912033969d932bc85 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 7.6E-48 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS11760 adec9c8c296a076912033969d932bc85 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 7.6E-48 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS11760 adec9c8c296a076912033969d932bc85 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 7.6E-48 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS11760 adec9c8c296a076912033969d932bc85 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 7.6E-48 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS11760 adec9c8c296a076912033969d932bc85 331 SUPERFAMILY SSF51735 3 166 1.04E-66 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS11760 adec9c8c296a076912033969d932bc85 331 Gene3D G3DSA:3.30.360.10 159 314 1.4E-87 T 09-03-2017 RG43_RS11760 adec9c8c296a076912033969d932bc85 331 PIRSF PIRSF000149 1 331 7.9E-137 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS11760 adec9c8c296a076912033969d932bc85 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 3.8E-134 T 09-03-2017 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS11760 adec9c8c296a076912033969d932bc85 331 SMART SM00846 3 150 4.8E-95 T 09-03-2017 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS11760 adec9c8c296a076912033969d932bc85 331 Gene3D G3DSA:3.40.50.720 1 158 5.1E-78 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS11760 adec9c8c296a076912033969d932bc85 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 2.1E-72 T 09-03-2017 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS11760 adec9c8c296a076912033969d932bc85 331 SUPERFAMILY SSF55347 149 312 2.43E-82 T 09-03-2017 RG43_RS21025 92283a0cdbfd5d51b3c1f2855c9d205e 206 Pfam PF01121 Dephospho-CoA kinase 3 177 1.8E-77 T 09-03-2017 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 RG43_RS21025 92283a0cdbfd5d51b3c1f2855c9d205e 206 SUPERFAMILY SSF52540 1 190 4.79E-44 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS21025 92283a0cdbfd5d51b3c1f2855c9d205e 206 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 192 27.884 T 09-03-2017 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 RG43_RS21025 92283a0cdbfd5d51b3c1f2855c9d205e 206 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 190 2.7E-72 T 09-03-2017 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 RG43_RS21025 92283a0cdbfd5d51b3c1f2855c9d205e 206 Gene3D G3DSA:3.40.50.300 2 199 1.3E-72 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25510 3fb2549c0452e2100be49f3a0d2cffea 346 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 29 335 5.5E-127 T 09-03-2017 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 RG43_RS25510 3fb2549c0452e2100be49f3a0d2cffea 346 Gene3D G3DSA:3.40.190.10 27 177 4.2E-56 T 09-03-2017 RG43_RS25510 3fb2549c0452e2100be49f3a0d2cffea 346 Gene3D G3DSA:3.40.190.10 181 338 2.8E-36 T 09-03-2017 RG43_RS25510 3fb2549c0452e2100be49f3a0d2cffea 346 SUPERFAMILY SSF53850 27 339 6.04E-98 T 09-03-2017 RG43_RS25510 3fb2549c0452e2100be49f3a0d2cffea 346 Pfam PF12849 PBP superfamily domain 27 307 7.6E-63 T 09-03-2017 IPR024370 PBP domain RG43_RS25510 3fb2549c0452e2100be49f3a0d2cffea 346 PIRSF PIRSF002756 1 338 1.9E-105 T 09-03-2017 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 RG43_RS18705 16c435a17ba7931f678c40d5b06c0089 516 SMART SM00052 267 507 1.3E-112 T 09-03-2017 IPR001633 EAL domain RG43_RS18705 16c435a17ba7931f678c40d5b06c0089 516 Pfam PF12792 CSS motif domain associated with EAL 39 242 9.1E-44 T 09-03-2017 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain RG43_RS18705 16c435a17ba7931f678c40d5b06c0089 516 SUPERFAMILY SSF141868 273 514 4.45E-75 T 09-03-2017 IPR001633 EAL domain RG43_RS18705 16c435a17ba7931f678c40d5b06c0089 516 Pfam PF00563 EAL domain 274 501 1.0E-65 T 09-03-2017 IPR001633 EAL domain RG43_RS18705 16c435a17ba7931f678c40d5b06c0089 516 Gene3D G3DSA:3.20.20.450 273 514 7.9E-81 T 09-03-2017 IPR001633 EAL domain RG43_RS17235 b44f939266db7350d7326798f5f7f138 250 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 8 17 - T 09-03-2017 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 RG43_RS17235 b44f939266db7350d7326798f5f7f138 250 SUPERFAMILY SSF53254 4 247 5.18E-78 T 09-03-2017 IPR029033 Histidine phosphatase superfamily RG43_RS17235 b44f939266db7350d7326798f5f7f138 250 SMART SM00855 5 191 2.7E-28 T 09-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 RG43_RS17235 b44f939266db7350d7326798f5f7f138 250 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 125 3.8E-30 T 09-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 RG43_RS17235 b44f939266db7350d7326798f5f7f138 250 Gene3D G3DSA:3.40.50.1240 2 250 2.1E-99 T 09-03-2017 IPR029033 Histidine phosphatase superfamily RG43_RS17235 b44f939266db7350d7326798f5f7f138 250 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 3 230 46.985 T 09-03-2017 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 RG43_RS17235 b44f939266db7350d7326798f5f7f138 250 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 5 248 2.3E-130 T 09-03-2017 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 RG43_RS06240 8661b27e6c644be13f4028a3476702ef 290 Gene3D G3DSA:3.40.50.300 112 281 6.9E-10 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS06240 8661b27e6c644be13f4028a3476702ef 290 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 76 289 1.6E-100 T 09-03-2017 IPR004392 Hydrogenase accessory protein HypB GO:0006461|GO:0016151 RG43_RS06240 8661b27e6c644be13f4028a3476702ef 290 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 106 267 1.1E-34 T 09-03-2017 IPR003495 CobW/HypB/UreG, nucleotide-binding domain RG43_RS06240 8661b27e6c644be13f4028a3476702ef 290 SUPERFAMILY SSF52540 88 286 1.59E-33 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS12890 32c387a0b95e6ee9503540b1d76d29c2 291 Gene3D G3DSA:3.40.190.10 170 256 2.5E-11 T 09-03-2017 RG43_RS12890 32c387a0b95e6ee9503540b1d76d29c2 291 Pfam PF03466 LysR substrate binding domain 85 282 3.7E-45 T 09-03-2017 IPR005119 LysR, substrate-binding RG43_RS12890 32c387a0b95e6ee9503540b1d76d29c2 291 SUPERFAMILY SSF53850 85 282 3.36E-37 T 09-03-2017 RG43_RS12890 32c387a0b95e6ee9503540b1d76d29c2 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.1E-17 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS12890 32c387a0b95e6ee9503540b1d76d29c2 291 SUPERFAMILY SSF46785 1 109 2.72E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS12890 32c387a0b95e6ee9503540b1d76d29c2 291 Gene3D G3DSA:3.40.190.10 89 169 3.9E-17 T 09-03-2017 RG43_RS12890 32c387a0b95e6ee9503540b1d76d29c2 291 Gene3D G3DSA:1.10.10.10 1 80 2.1E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS10440 fadf6df7e706867994e73c084c46a629 401 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 6 398 1.5E-116 T 09-03-2017 IPR006444 Phage major capsid protein, HK97 RG43_RS10440 fadf6df7e706867994e73c084c46a629 401 Pfam PF05065 Phage capsid family 115 398 1.8E-79 T 09-03-2017 IPR024455 Phage capsid RG43_RS10440 fadf6df7e706867994e73c084c46a629 401 SUPERFAMILY SSF56563 107 400 9.42E-74 T 09-03-2017 RG43_RS04370 3a2afcef4ece23200f281c6b4f598dcb 499 Gene3D G3DSA:3.30.43.10 17 109 1.8E-26 T 09-03-2017 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RG43_RS04370 3a2afcef4ece23200f281c6b4f598dcb 499 TIGRFAM TIGR00387 glcD: glycolate oxidase, subunit GlcD 59 470 2.7E-191 T 09-03-2017 IPR004490 Glycolate oxidase subunit GlcD GO:0008891|GO:0009339 RG43_RS04370 3a2afcef4ece23200f281c6b4f598dcb 499 SUPERFAMILY SSF55103 204 474 6.7E-78 T 09-03-2017 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RG43_RS04370 3a2afcef4ece23200f281c6b4f598dcb 499 SUPERFAMILY SSF56176 21 231 1.4E-64 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RG43_RS04370 3a2afcef4ece23200f281c6b4f598dcb 499 Pfam PF01565 FAD binding domain 56 194 3.9E-35 T 09-03-2017 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RG43_RS04370 3a2afcef4ece23200f281c6b4f598dcb 499 Pfam PF02913 FAD linked oxidases, C-terminal domain 230 470 5.5E-69 T 09-03-2017 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RG43_RS04370 3a2afcef4ece23200f281c6b4f598dcb 499 Gene3D G3DSA:3.30.465.10 111 231 1.5E-31 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RG43_RS04370 3a2afcef4ece23200f281c6b4f598dcb 499 Gene3D G3DSA:1.10.45.10 432 471 2.8E-9 T 09-03-2017 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RG43_RS26745 3a2afcef4ece23200f281c6b4f598dcb 499 Gene3D G3DSA:3.30.43.10 17 109 1.8E-26 T 09-03-2017 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RG43_RS26745 3a2afcef4ece23200f281c6b4f598dcb 499 TIGRFAM TIGR00387 glcD: glycolate oxidase, subunit GlcD 59 470 2.7E-191 T 09-03-2017 IPR004490 Glycolate oxidase subunit GlcD GO:0008891|GO:0009339 RG43_RS26745 3a2afcef4ece23200f281c6b4f598dcb 499 SUPERFAMILY SSF55103 204 474 6.7E-78 T 09-03-2017 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RG43_RS26745 3a2afcef4ece23200f281c6b4f598dcb 499 SUPERFAMILY SSF56176 21 231 1.4E-64 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RG43_RS26745 3a2afcef4ece23200f281c6b4f598dcb 499 Pfam PF01565 FAD binding domain 56 194 3.9E-35 T 09-03-2017 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RG43_RS26745 3a2afcef4ece23200f281c6b4f598dcb 499 Pfam PF02913 FAD linked oxidases, C-terminal domain 230 470 5.5E-69 T 09-03-2017 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RG43_RS26745 3a2afcef4ece23200f281c6b4f598dcb 499 Gene3D G3DSA:3.30.465.10 111 231 1.5E-31 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RG43_RS26745 3a2afcef4ece23200f281c6b4f598dcb 499 Gene3D G3DSA:1.10.45.10 432 471 2.8E-9 T 09-03-2017 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RG43_RS11730 30c2a351feba39cb64d30478b917b7c9 491 Pfam PF17158 Membrane-associated sensor, integral membrane domain 87 321 5.0E-77 T 09-03-2017 IPR033424 Membrane-associated sensor domain RG43_RS11730 30c2a351feba39cb64d30478b917b7c9 491 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 326 488 3.3E-36 T 09-03-2017 IPR000160 GGDEF domain RG43_RS11730 30c2a351feba39cb64d30478b917b7c9 491 SMART SM00267 316 489 1.8E-53 T 09-03-2017 IPR000160 GGDEF domain RG43_RS11730 30c2a351feba39cb64d30478b917b7c9 491 Gene3D G3DSA:3.30.70.270 330 488 4.9E-40 T 09-03-2017 RG43_RS11730 30c2a351feba39cb64d30478b917b7c9 491 SUPERFAMILY SSF55073 333 488 4.08E-36 T 09-03-2017 IPR029787 Nucleotide cyclase RG43_RS11730 30c2a351feba39cb64d30478b917b7c9 491 Pfam PF00990 Diguanylate cyclase, GGDEF domain 328 485 3.0E-44 T 09-03-2017 IPR000160 GGDEF domain RG43_RS14415 f8a378c436f2abe4c5b3dd21bcc309de 1247 Gene3D G3DSA:2.40.40.20 1054 1234 4.2E-45 T 09-03-2017 RG43_RS14415 f8a378c436f2abe4c5b3dd21bcc309de 1247 Gene3D G3DSA:2.20.25.90 52 98 2.5E-32 T 09-03-2017 RG43_RS14415 f8a378c436f2abe4c5b3dd21bcc309de 1247 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 2 1235 0.0 T 09-03-2017 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 RG43_RS14415 f8a378c436f2abe4c5b3dd21bcc309de 1247 Gene3D G3DSA:3.40.50.740 108 203 9.6E-7 T 09-03-2017 RG43_RS14415 f8a378c436f2abe4c5b3dd21bcc309de 1247 SUPERFAMILY SSF50692 1081 1235 2.94E-47 T 09-03-2017 IPR009010 Aspartate decarboxylase-like domain RG43_RS14415 f8a378c436f2abe4c5b3dd21bcc309de 1247 Gene3D G3DSA:4.10.1200.10 1 28 1.5E-19 T 09-03-2017 RG43_RS14415 f8a378c436f2abe4c5b3dd21bcc309de 1247 SUPERFAMILY SSF53706 4 1074 0.0 T 09-03-2017 RG43_RS14415 f8a378c436f2abe4c5b3dd21bcc309de 1247 Pfam PF01568 Molydopterin dinucleotide binding domain 1088 1202 1.6E-21 T 09-03-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RG43_RS14415 f8a378c436f2abe4c5b3dd21bcc309de 1247 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 3 40 7.6E-17 T 09-03-2017 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.99.4 RG43_RS14415 f8a378c436f2abe4c5b3dd21bcc309de 1247 Gene3D G3DSA:3.40.50.740 593 778 6.7E-60 T 09-03-2017 RG43_RS14415 f8a378c436f2abe4c5b3dd21bcc309de 1247 Gene3D G3DSA:3.90.55.10 779 836 6.2E-7 T 09-03-2017 RG43_RS14415 f8a378c436f2abe4c5b3dd21bcc309de 1247 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 777 794 - T 09-03-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 RG43_RS14415 f8a378c436f2abe4c5b3dd21bcc309de 1247 Gene3D G3DSA:3.40.228.10 218 336 3.1E-79 T 09-03-2017 RG43_RS14415 f8a378c436f2abe4c5b3dd21bcc309de 1247 Gene3D G3DSA:3.40.228.10 487 592 3.1E-79 T 09-03-2017 RG43_RS14415 f8a378c436f2abe4c5b3dd21bcc309de 1247 SMART SM00926 43 105 6.6E-8 T 09-03-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS14415 f8a378c436f2abe4c5b3dd21bcc309de 1247 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 09-03-2017 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 RG43_RS14415 f8a378c436f2abe4c5b3dd21bcc309de 1247 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 1125 1152 - T 09-03-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 RG43_RS14415 f8a378c436f2abe4c5b3dd21bcc309de 1247 Pfam PF00384 Molybdopterin oxidoreductase 108 833 5.4E-197 T 09-03-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS23355 ab5227f9f7cac5ee0aa61af2bc9c67d5 138 SUPERFAMILY SSF111038 1 138 3.01E-46 T 09-03-2017 IPR001602 Uncharacterised protein family UPF0047 RG43_RS23355 ab5227f9f7cac5ee0aa61af2bc9c67d5 138 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 99 117 - T 09-03-2017 IPR001602 Uncharacterised protein family UPF0047 RG43_RS23355 ab5227f9f7cac5ee0aa61af2bc9c67d5 138 Gene3D G3DSA:2.60.120.460 1 138 7.2E-55 T 09-03-2017 IPR001602 Uncharacterised protein family UPF0047 RG43_RS23355 ab5227f9f7cac5ee0aa61af2bc9c67d5 138 PIRSF PIRSF004681 1 138 2.0E-42 T 09-03-2017 IPR001602 Uncharacterised protein family UPF0047 RG43_RS23355 ab5227f9f7cac5ee0aa61af2bc9c67d5 138 Pfam PF01894 Uncharacterised protein family UPF0047 19 134 3.5E-35 T 09-03-2017 IPR001602 Uncharacterised protein family UPF0047 RG43_RS23355 ab5227f9f7cac5ee0aa61af2bc9c67d5 138 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 4 138 3.4E-54 T 09-03-2017 IPR001602 Uncharacterised protein family UPF0047 RG43_RS18330 5a58d31c0d86a92dbede48e543564727 461 SMART SM00840 341 402 3.1E-29 T 09-03-2017 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 RG43_RS18330 5a58d31c0d86a92dbede48e543564727 461 Gene3D G3DSA:1.20.120.640 306 392 7.7E-30 T 09-03-2017 RG43_RS18330 5a58d31c0d86a92dbede48e543564727 461 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 461 39.849 T 09-03-2017 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 RG43_RS18330 5a58d31c0d86a92dbede48e543564727 461 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 460 2.4E-201 T 09-03-2017 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 RG43_RS18330 5a58d31c0d86a92dbede48e543564727 461 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 3.2E-146 T 09-03-2017 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 RG43_RS18330 5a58d31c0d86a92dbede48e543564727 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 3.6E-30 T 09-03-2017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RG43_RS18330 5a58d31c0d86a92dbede48e543564727 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 3.6E-30 T 09-03-2017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RG43_RS18330 5a58d31c0d86a92dbede48e543564727 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 3.6E-30 T 09-03-2017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RG43_RS18330 5a58d31c0d86a92dbede48e543564727 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 3.6E-30 T 09-03-2017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RG43_RS18330 5a58d31c0d86a92dbede48e543564727 461 Pfam PF09190 DALR domain 341 402 6.7E-26 T 09-03-2017 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 RG43_RS18330 5a58d31c0d86a92dbede48e543564727 461 SUPERFAMILY SSF47323 316 460 3.79E-45 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS18330 5a58d31c0d86a92dbede48e543564727 461 SUPERFAMILY SSF52374 1 313 1.38E-103 T 09-03-2017 RG43_RS18330 5a58d31c0d86a92dbede48e543564727 461 Gene3D G3DSA:3.40.50.620 20 305 7.5E-114 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS13625 9372114521ddb021cf3a3d46ba16a33d 329 Gene3D G3DSA:3.40.50.720 138 305 7.5E-45 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS13625 9372114521ddb021cf3a3d46ba16a33d 329 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 - T 09-03-2017 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RG43_RS13625 9372114521ddb021cf3a3d46ba16a33d 329 SUPERFAMILY SSF52283 2 135 1.89E-45 T 09-03-2017 RG43_RS13625 9372114521ddb021cf3a3d46ba16a33d 329 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 327 5.1E-35 T 09-03-2017 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 RG43_RS13625 9372114521ddb021cf3a3d46ba16a33d 329 Gene3D G3DSA:3.40.50.720 1 137 2.0E-51 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS13625 9372114521ddb021cf3a3d46ba16a33d 329 SUPERFAMILY SSF51735 102 298 1.34E-55 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS13625 9372114521ddb021cf3a3d46ba16a33d 329 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 09-03-2017 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RG43_RS13625 9372114521ddb021cf3a3d46ba16a33d 329 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 297 5.4E-53 T 09-03-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RG43_RS13625 9372114521ddb021cf3a3d46ba16a33d 329 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 09-03-2017 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RG43_RS06990 26e0d12ce6c8984181e77a3b1b768493 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 53.441 T 09-03-2017 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 RG43_RS06990 26e0d12ce6c8984181e77a3b1b768493 417 Gene3D G3DSA:3.40.640.10 37 285 2.7E-110 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS06990 26e0d12ce6c8984181e77a3b1b768493 417 PIRSF PIRSF000412 1 417 9.7E-177 T 09-03-2017 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 RG43_RS06990 26e0d12ce6c8984181e77a3b1b768493 417 Pfam PF00464 Serine hydroxymethyltransferase 8 386 1.6E-191 T 09-03-2017 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 RG43_RS06990 26e0d12ce6c8984181e77a3b1b768493 417 Gene3D G3DSA:3.90.1150.10 286 416 1.5E-56 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RG43_RS06990 26e0d12ce6c8984181e77a3b1b768493 417 SUPERFAMILY SSF53383 6 416 5.57E-187 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS06990 26e0d12ce6c8984181e77a3b1b768493 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 09-03-2017 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 RG43_RS23385 6f953429824e1de805af19f8ff1e525e 471 Gene3D G3DSA:3.40.50.300 192 464 3.7E-104 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS23385 6f953429824e1de805af19f8ff1e525e 471 Gene3D G3DSA:1.10.860.10 27 129 5.8E-42 T 09-03-2017 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal RG43_RS23385 6f953429824e1de805af19f8ff1e525e 471 SUPERFAMILY SSF52540 204 275 1.97E-52 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS23385 6f953429824e1de805af19f8ff1e525e 471 SUPERFAMILY SSF52540 302 456 1.97E-52 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS23385 6f953429824e1de805af19f8ff1e525e 471 SUPERFAMILY SSF48024 25 136 1.23E-39 T 09-03-2017 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 RG43_RS23385 6f953429824e1de805af19f8ff1e525e 471 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 27 464 4.1E-175 T 09-03-2017 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 RG43_RS23385 6f953429824e1de805af19f8ff1e525e 471 Pfam PF03796 DnaB-like helicase C terminal domain 206 462 1.9E-113 T 09-03-2017 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 RG43_RS23385 6f953429824e1de805af19f8ff1e525e 471 SMART SM00382 223 429 5.3E-4 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS23385 6f953429824e1de805af19f8ff1e525e 471 Pfam PF00772 DnaB-like helicase N terminal domain 27 128 3.0E-37 T 09-03-2017 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 RG43_RS00770 c82328f07036d424e84c43b765e80926 614 SUPERFAMILY SSF46785 551 607 6.42E-15 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS00770 c82328f07036d424e84c43b765e80926 614 Pfam PF09107 Elongation factor SelB, winged helix 560 605 1.2E-19 T 09-03-2017 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 RG43_RS00770 c82328f07036d424e84c43b765e80926 614 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 1 607 1.2E-276 T 09-03-2017 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 RG43_RS00770 c82328f07036d424e84c43b765e80926 614 Pfam PF03144 Elongation factor Tu domain 2 189 256 4.5E-9 T 09-03-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 RG43_RS00770 c82328f07036d424e84c43b765e80926 614 Gene3D G3DSA:2.40.30.10 173 296 7.4E-28 T 09-03-2017 RG43_RS00770 c82328f07036d424e84c43b765e80926 614 Gene3D G3DSA:1.10.10.10 548 607 8.3E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS00770 c82328f07036d424e84c43b765e80926 614 Pfam PF00009 Elongation factor Tu GTP binding domain 2 163 2.0E-31 T 09-03-2017 RG43_RS00770 c82328f07036d424e84c43b765e80926 614 SUPERFAMILY SSF50465 272 351 3.41E-7 T 09-03-2017 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RG43_RS00770 c82328f07036d424e84c43b765e80926 614 Gene3D G3DSA:1.10.10.10 416 481 2.9E-14 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS00770 c82328f07036d424e84c43b765e80926 614 Gene3D G3DSA:3.40.50.300 3 163 5.2E-42 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS00770 c82328f07036d424e84c43b765e80926 614 SUPERFAMILY SSF46785 488 546 8.63E-7 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS00770 c82328f07036d424e84c43b765e80926 614 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 26 41 - T 09-03-2017 IPR031157 Tr-type G domain, conserved site RG43_RS00770 c82328f07036d424e84c43b765e80926 614 PRINTS PR00315 GTP-binding elongation factor signature 54 64 1.3E-7 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RG43_RS00770 c82328f07036d424e84c43b765e80926 614 PRINTS PR00315 GTP-binding elongation factor signature 2 15 1.3E-7 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RG43_RS00770 c82328f07036d424e84c43b765e80926 614 PRINTS PR00315 GTP-binding elongation factor signature 70 81 1.3E-7 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RG43_RS00770 c82328f07036d424e84c43b765e80926 614 PRINTS PR00315 GTP-binding elongation factor signature 107 116 1.3E-7 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RG43_RS00770 c82328f07036d424e84c43b765e80926 614 SUPERFAMILY SSF46785 417 484 1.5E-14 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS00770 c82328f07036d424e84c43b765e80926 614 SUPERFAMILY SSF50447 175 293 2.16E-25 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain RG43_RS00770 c82328f07036d424e84c43b765e80926 614 SUPERFAMILY SSF52540 2 165 1.3E-41 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS00770 c82328f07036d424e84c43b765e80926 614 Pfam PF09106 Elongation factor SelB, winged helix 424 480 8.8E-16 T 09-03-2017 IPR015190 Translation elongation factor SelB, winged helix, type 2 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 RG43_RS19565 7fb0046b6e1854749fe6ad1e2aab8677 1415 SUPERFAMILY SSF49373 1296 1397 4.71E-5 T 09-03-2017 IPR008964 Invasin/intimin cell-adhesion fragments RG43_RS19565 7fb0046b6e1854749fe6ad1e2aab8677 1415 Gene3D G3DSA:2.60.40.920 680 781 1.9E-18 T 09-03-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain RG43_RS19565 7fb0046b6e1854749fe6ad1e2aab8677 1415 Gene3D G3DSA:2.60.40.920 992 1090 7.7E-24 T 09-03-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain RG43_RS19565 7fb0046b6e1854749fe6ad1e2aab8677 1415 Gene3D G3DSA:2.60.40.920 458 573 1.9E-16 T 09-03-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain RG43_RS19565 7fb0046b6e1854749fe6ad1e2aab8677 1415 Gene3D G3DSA:2.60.40.920 885 989 3.1E-19 T 09-03-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain RG43_RS19565 7fb0046b6e1854749fe6ad1e2aab8677 1415 Gene3D G3DSA:2.60.40.920 577 675 9.2E-18 T 09-03-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain RG43_RS19565 7fb0046b6e1854749fe6ad1e2aab8677 1415 Gene3D G3DSA:2.60.40.920 783 879 1.6E-17 T 09-03-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain RG43_RS19565 7fb0046b6e1854749fe6ad1e2aab8677 1415 Gene3D G3DSA:2.60.40.920 1194 1298 8.4E-19 T 09-03-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain RG43_RS19565 7fb0046b6e1854749fe6ad1e2aab8677 1415 Pfam PF11924 Invasin beta-domain of outer membrane 76 350 5.6E-114 T 09-03-2017 IPR024519 Invasin beta-domain of outer membrane RG43_RS19565 7fb0046b6e1854749fe6ad1e2aab8677 1415 SUPERFAMILY SSF49373 579 663 5.89E-14 T 09-03-2017 IPR008964 Invasin/intimin cell-adhesion fragments RG43_RS19565 7fb0046b6e1854749fe6ad1e2aab8677 1415 Gene3D G3DSA:2.60.40.920 1097 1193 6.5E-20 T 09-03-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain RG43_RS19565 7fb0046b6e1854749fe6ad1e2aab8677 1415 Gene3D G3DSA:2.60.40.920 1305 1407 7.4E-7 T 09-03-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain RG43_RS19565 7fb0046b6e1854749fe6ad1e2aab8677 1415 SUPERFAMILY SSF49373 1199 1288 5.49E-16 T 09-03-2017 IPR008964 Invasin/intimin cell-adhesion fragments RG43_RS19565 7fb0046b6e1854749fe6ad1e2aab8677 1415 SUPERFAMILY SSF49373 990 1088 1.24E-18 T 09-03-2017 IPR008964 Invasin/intimin cell-adhesion fragments RG43_RS19565 7fb0046b6e1854749fe6ad1e2aab8677 1415 SUPERFAMILY SSF49373 891 986 2.88E-15 T 09-03-2017 IPR008964 Invasin/intimin cell-adhesion fragments RG43_RS19565 7fb0046b6e1854749fe6ad1e2aab8677 1415 SUPERFAMILY SSF49373 1088 1194 3.53E-17 T 09-03-2017 IPR008964 Invasin/intimin cell-adhesion fragments RG43_RS19565 7fb0046b6e1854749fe6ad1e2aab8677 1415 SUPERFAMILY SSF49373 474 567 2.2E-10 T 09-03-2017 IPR008964 Invasin/intimin cell-adhesion fragments RG43_RS19565 7fb0046b6e1854749fe6ad1e2aab8677 1415 Pfam PF09134 Invasin, domain 3 893 980 7.0E-10 T 09-03-2017 IPR015217 Invasin, domain 3 RG43_RS19565 7fb0046b6e1854749fe6ad1e2aab8677 1415 Pfam PF09134 Invasin, domain 3 789 885 6.3E-12 T 09-03-2017 IPR015217 Invasin, domain 3 RG43_RS19565 7fb0046b6e1854749fe6ad1e2aab8677 1415 Pfam PF09134 Invasin, domain 3 579 680 1.7E-15 T 09-03-2017 IPR015217 Invasin, domain 3 RG43_RS19565 7fb0046b6e1854749fe6ad1e2aab8677 1415 Pfam PF09134 Invasin, domain 3 474 565 3.4E-12 T 09-03-2017 IPR015217 Invasin, domain 3 RG43_RS19565 7fb0046b6e1854749fe6ad1e2aab8677 1415 Pfam PF09134 Invasin, domain 3 684 783 6.1E-11 T 09-03-2017 IPR015217 Invasin, domain 3 RG43_RS19565 7fb0046b6e1854749fe6ad1e2aab8677 1415 Pfam PF02369 Bacterial Ig-like domain (group 1) 1099 1185 5.7E-12 T 09-03-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain RG43_RS19565 7fb0046b6e1854749fe6ad1e2aab8677 1415 Pfam PF02369 Bacterial Ig-like domain (group 1) 1199 1287 5.6E-11 T 09-03-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain RG43_RS19565 7fb0046b6e1854749fe6ad1e2aab8677 1415 Pfam PF02369 Bacterial Ig-like domain (group 1) 999 1086 1.2E-11 T 09-03-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain RG43_RS19565 7fb0046b6e1854749fe6ad1e2aab8677 1415 PRINTS PR01369 Intimin signature 202 217 2.5E-14 T 09-03-2017 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 RG43_RS19565 7fb0046b6e1854749fe6ad1e2aab8677 1415 PRINTS PR01369 Intimin signature 230 249 2.5E-14 T 09-03-2017 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 RG43_RS19565 7fb0046b6e1854749fe6ad1e2aab8677 1415 PRINTS PR01369 Intimin signature 386 398 2.5E-14 T 09-03-2017 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 RG43_RS19565 7fb0046b6e1854749fe6ad1e2aab8677 1415 PRINTS PR01369 Intimin signature 298 317 2.5E-14 T 09-03-2017 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 RG43_RS19565 7fb0046b6e1854749fe6ad1e2aab8677 1415 SUPERFAMILY SSF49373 786 880 8.11E-15 T 09-03-2017 IPR008964 Invasin/intimin cell-adhesion fragments RG43_RS19565 7fb0046b6e1854749fe6ad1e2aab8677 1415 SMART SM00634 1097 1188 9.2E-22 T 09-03-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain RG43_RS19565 7fb0046b6e1854749fe6ad1e2aab8677 1415 SMART SM00634 583 674 4.9E-20 T 09-03-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain RG43_RS19565 7fb0046b6e1854749fe6ad1e2aab8677 1415 SMART SM00634 999 1087 8.0E-24 T 09-03-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain RG43_RS19565 7fb0046b6e1854749fe6ad1e2aab8677 1415 SMART SM00634 1199 1290 9.2E-25 T 09-03-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain RG43_RS19565 7fb0046b6e1854749fe6ad1e2aab8677 1415 SUPERFAMILY SSF49373 684 780 2.88E-13 T 09-03-2017 IPR008964 Invasin/intimin cell-adhesion fragments RG43_RS12330 6b1f65e4dd1d9100dd550f8cf0526d19 213 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 202 6.5E-92 T 09-03-2017 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RG43_RS12330 6b1f65e4dd1d9100dd550f8cf0526d19 213 SUPERFAMILY SSF63380 94 201 3.66E-32 T 09-03-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RG43_RS12330 6b1f65e4dd1d9100dd550f8cf0526d19 213 PIRSF PIRSF000498 1 212 2.6E-77 T 09-03-2017 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RG43_RS12330 6b1f65e4dd1d9100dd550f8cf0526d19 213 SUPERFAMILY SSF63380 1 93 5.78E-28 T 09-03-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RG43_RS12330 6b1f65e4dd1d9100dd550f8cf0526d19 213 Gene3D G3DSA:2.40.30.20 105 199 1.9E-27 T 09-03-2017 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 RG43_RS12330 6b1f65e4dd1d9100dd550f8cf0526d19 213 Gene3D G3DSA:2.40.30.20 5 104 1.7E-32 T 09-03-2017 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 RG43_RS12330 6b1f65e4dd1d9100dd550f8cf0526d19 213 Pfam PF00677 Lumazine binding domain 100 185 1.0E-19 T 09-03-2017 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RG43_RS12330 6b1f65e4dd1d9100dd550f8cf0526d19 213 Pfam PF00677 Lumazine binding domain 3 87 2.1E-21 T 09-03-2017 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RG43_RS09260 ba178e4f3ff09e0c451bc193c7eab5a5 677 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 8 536 4.7E-210 T 09-03-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RG43_RS09260 ba178e4f3ff09e0c451bc193c7eab5a5 677 SUPERFAMILY SSF47323 391 548 3.55E-47 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS09260 ba178e4f3ff09e0c451bc193c7eab5a5 677 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 543 677 1.5E-48 T 09-03-2017 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RG43_RS09260 ba178e4f3ff09e0c451bc193c7eab5a5 677 SUPERFAMILY SSF57770 142 176 1.15E-12 T 09-03-2017 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 RG43_RS09260 ba178e4f3ff09e0c451bc193c7eab5a5 677 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 09-03-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS09260 ba178e4f3ff09e0c451bc193c7eab5a5 677 SUPERFAMILY SSF52374 176 388 6.37E-107 T 09-03-2017 RG43_RS09260 ba178e4f3ff09e0c451bc193c7eab5a5 677 SUPERFAMILY SSF52374 6 141 6.37E-107 T 09-03-2017 RG43_RS09260 ba178e4f3ff09e0c451bc193c7eab5a5 677 Pfam PF01588 Putative tRNA binding domain 581 674 4.9E-22 T 09-03-2017 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 RG43_RS09260 ba178e4f3ff09e0c451bc193c7eab5a5 677 Gene3D G3DSA:3.40.50.620 183 385 2.2E-93 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS09260 ba178e4f3ff09e0c451bc193c7eab5a5 677 Gene3D G3DSA:3.40.50.620 6 144 2.2E-93 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS09260 ba178e4f3ff09e0c451bc193c7eab5a5 677 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 546 41.955 T 09-03-2017 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 RG43_RS09260 ba178e4f3ff09e0c451bc193c7eab5a5 677 Pfam PF09334 tRNA synthetases class I (M) 8 397 2.8E-165 T 09-03-2017 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS09260 ba178e4f3ff09e0c451bc193c7eab5a5 677 SUPERFAMILY SSF50249 570 676 1.64E-28 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS09260 ba178e4f3ff09e0c451bc193c7eab5a5 677 Gene3D G3DSA:2.40.50.140 568 677 9.8E-39 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS09260 ba178e4f3ff09e0c451bc193c7eab5a5 677 Gene3D G3DSA:1.10.730.10 391 526 2.2E-42 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS09260 ba178e4f3ff09e0c451bc193c7eab5a5 677 Gene3D G3DSA:2.20.28.20 145 176 1.5E-19 T 09-03-2017 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 RG43_RS09260 ba178e4f3ff09e0c451bc193c7eab5a5 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 292 307 5.8E-26 T 09-03-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RG43_RS09260 ba178e4f3ff09e0c451bc193c7eab5a5 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 5.8E-26 T 09-03-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RG43_RS09260 ba178e4f3ff09e0c451bc193c7eab5a5 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 5.8E-26 T 09-03-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RG43_RS09260 ba178e4f3ff09e0c451bc193c7eab5a5 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 251 262 5.8E-26 T 09-03-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RG43_RS09260 ba178e4f3ff09e0c451bc193c7eab5a5 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 5.8E-26 T 09-03-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RG43_RS09260 ba178e4f3ff09e0c451bc193c7eab5a5 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 385 396 5.8E-26 T 09-03-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RG43_RS00160 4d27f69de10d8247eaf3b39d99f2ebc5 669 SMART SM00304 365 417 9.6E-4 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RG43_RS00160 4d27f69de10d8247eaf3b39d99f2ebc5 669 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 558 663 8.0E-14 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS00160 4d27f69de10d8247eaf3b39d99f2ebc5 669 SUPERFAMILY SSF55874 515 661 2.23E-27 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS00160 4d27f69de10d8247eaf3b39d99f2ebc5 669 Pfam PF00512 His Kinase A (phospho-acceptor) domain 450 513 1.2E-7 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS00160 4d27f69de10d8247eaf3b39d99f2ebc5 669 SUPERFAMILY SSF47384 444 512 3.14E-7 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS00160 4d27f69de10d8247eaf3b39d99f2ebc5 669 Gene3D G3DSA:3.30.565.10 517 665 2.5E-28 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS00160 4d27f69de10d8247eaf3b39d99f2ebc5 669 SMART SM00387 558 664 3.2E-18 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS00160 4d27f69de10d8247eaf3b39d99f2ebc5 669 SMART SM00388 448 516 4.9E-4 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS24150 0da58e887f0d36bd578530ea82271257 142 Pfam PF00582 Universal stress protein family 3 137 3.0E-19 T 09-03-2017 IPR006016 UspA GO:0006950 RG43_RS24150 0da58e887f0d36bd578530ea82271257 142 PIRSF PIRSF006276 1 141 6.0E-44 T 09-03-2017 IPR006015 Universal stress protein A RG43_RS24150 0da58e887f0d36bd578530ea82271257 142 Gene3D G3DSA:3.40.50.620 3 138 2.4E-22 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS24150 0da58e887f0d36bd578530ea82271257 142 SUPERFAMILY SSF52402 3 138 1.05E-22 T 09-03-2017 RG43_RS02635 25ab1eb58b80b9693182877866903f2a 1034 Gene3D G3DSA:3.30.70.1430 568 670 4.3E-40 T 09-03-2017 RG43_RS02635 25ab1eb58b80b9693182877866903f2a 1034 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 1.8E-115 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS02635 25ab1eb58b80b9693182877866903f2a 1034 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 1.8E-115 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS02635 25ab1eb58b80b9693182877866903f2a 1034 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.8E-115 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS02635 25ab1eb58b80b9693182877866903f2a 1034 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 1.8E-115 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS02635 25ab1eb58b80b9693182877866903f2a 1034 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 1.8E-115 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS02635 25ab1eb58b80b9693182877866903f2a 1034 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 1.8E-115 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS02635 25ab1eb58b80b9693182877866903f2a 1034 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 1.8E-115 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS02635 25ab1eb58b80b9693182877866903f2a 1034 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 1.8E-115 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS02635 25ab1eb58b80b9693182877866903f2a 1034 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.8E-115 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS02635 25ab1eb58b80b9693182877866903f2a 1034 SUPERFAMILY SSF82714 182 271 4.45E-20 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RG43_RS02635 25ab1eb58b80b9693182877866903f2a 1034 SUPERFAMILY SSF82693 566 670 2.93E-32 T 09-03-2017 RG43_RS02635 25ab1eb58b80b9693182877866903f2a 1034 Pfam PF00873 AcrB/AcrD/AcrF family 1 1029 0.0 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS02635 25ab1eb58b80b9693182877866903f2a 1034 SUPERFAMILY SSF82866 296 497 1.19E-47 T 09-03-2017 RG43_RS02635 25ab1eb58b80b9693182877866903f2a 1034 Gene3D G3DSA:3.30.2090.10 181 275 5.7E-24 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RG43_RS02635 25ab1eb58b80b9693182877866903f2a 1034 SUPERFAMILY SSF82714 725 810 7.46E-22 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RG43_RS02635 25ab1eb58b80b9693182877866903f2a 1034 Gene3D G3DSA:3.30.70.1430 38 139 8.5E-37 T 09-03-2017 RG43_RS02635 25ab1eb58b80b9693182877866903f2a 1034 SUPERFAMILY SSF82866 808 1031 2.22E-44 T 09-03-2017 RG43_RS02635 25ab1eb58b80b9693182877866903f2a 1034 SUPERFAMILY SSF82693 136 182 3.14E-29 T 09-03-2017 RG43_RS02635 25ab1eb58b80b9693182877866903f2a 1034 SUPERFAMILY SSF82693 274 330 3.14E-29 T 09-03-2017 RG43_RS02635 25ab1eb58b80b9693182877866903f2a 1034 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1033 0.0 T 09-03-2017 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 RG43_RS02635 25ab1eb58b80b9693182877866903f2a 1034 SUPERFAMILY SSF82693 38 132 3.77E-28 T 09-03-2017 RG43_RS02635 25ab1eb58b80b9693182877866903f2a 1034 Gene3D G3DSA:1.10.3850.10 278 498 9.1E-60 T 09-03-2017 RG43_RS02635 25ab1eb58b80b9693182877866903f2a 1034 Gene3D G3DSA:1.10.3850.10 816 1030 2.5E-56 T 09-03-2017 RG43_RS02635 25ab1eb58b80b9693182877866903f2a 1034 Gene3D G3DSA:3.30.2090.10 725 811 3.4E-27 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RG43_RS17305 ab46ab383a52c28fe81b64c850bd935f 263 Pfam PF16331 TolA binding protein trimerisation 37 111 8.3E-25 T 09-03-2017 IPR032519 YbgF, trimerisation domain GO:0070206 RG43_RS17305 ab46ab383a52c28fe81b64c850bd935f 263 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 144 260 3.7E-40 T 09-03-2017 IPR014162 Tol-Pal system, YbgF RG43_RS17305 ab46ab383a52c28fe81b64c850bd935f 263 SUPERFAMILY SSF48452 139 254 1.84E-12 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS17305 ab46ab383a52c28fe81b64c850bd935f 263 Pfam PF13432 Tetratricopeptide repeat 159 214 8.7E-6 T 09-03-2017 RG43_RS17305 ab46ab383a52c28fe81b64c850bd935f 263 Gene3D G3DSA:1.25.40.10 64 255 5.9E-13 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS17305 ab46ab383a52c28fe81b64c850bd935f 263 Pfam PF13174 Tetratricopeptide repeat 218 250 4.8E-7 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 RG43_RS10130 bd03c36b7e8e4913f405b79192edb729 484 Pfam PF10423 Bacterial AMP nucleoside phosphorylase N-terminus 12 167 4.4E-53 T 09-03-2017 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 RG43_RS10130 bd03c36b7e8e4913f405b79192edb729 484 SUPERFAMILY SSF53167 9 484 1.57E-159 T 09-03-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RG43_RS10130 bd03c36b7e8e4913f405b79192edb729 484 Gene3D G3DSA:3.30.1730.10 2 171 8.0E-68 T 09-03-2017 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 RG43_RS10130 bd03c36b7e8e4913f405b79192edb729 484 Pfam PF01048 Phosphorylase superfamily 269 431 3.4E-18 T 09-03-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RG43_RS10130 bd03c36b7e8e4913f405b79192edb729 484 Hamap MF_01932 AMP nucleosidase [amn]. 3 484 59.85 T 09-03-2017 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 RG43_RS10130 bd03c36b7e8e4913f405b79192edb729 484 Gene3D G3DSA:3.40.50.1580 174 466 3.0E-117 T 09-03-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RG43_RS10130 bd03c36b7e8e4913f405b79192edb729 484 TIGRFAM TIGR01717 AMP-nucleosdse: AMP nucleosidase 11 484 5.5E-252 T 09-03-2017 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 RG43_RS01480 9137cd41b85cc58dafeac14d282345cb 119 Pfam PF05534 HicB family 60 112 1.6E-16 T 09-03-2017 IPR008651 Uncharacterised protein family HicB RG43_RS01480 9137cd41b85cc58dafeac14d282345cb 119 SUPERFAMILY SSF47598 76 118 9.85E-9 T 09-03-2017 IPR010985 Ribbon-helix-helix GO:0006355 RG43_RS01480 9137cd41b85cc58dafeac14d282345cb 119 Gene3D G3DSA:1.10.1220.10 77 117 3.3E-7 T 09-03-2017 IPR013321 Arc-type ribbon-helix-helix GO:0006355 RG43_RS20345 a798f297e003b76beda9a978d6406032 124 Pfam PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A 19 117 6.6E-52 T 09-03-2017 IPR009320 YagB/YeeU/YfjZ RG43_RS20345 a798f297e003b76beda9a978d6406032 124 Gene3D G3DSA:3.30.450.20 27 119 2.1E-58 T 09-03-2017 RG43_RS20345 a798f297e003b76beda9a978d6406032 124 SUPERFAMILY SSF143737 5 117 1.57E-56 T 09-03-2017 RG43_RS05375 0634f38cf897bbd6c7a1eae8b47d0151 956 SUPERFAMILY SSF54665 164 317 4.97E-45 T 09-03-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RG43_RS05375 0634f38cf897bbd6c7a1eae8b47d0151 956 Gene3D G3DSA:3.30.365.10 483 558 1.2E-37 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RG43_RS05375 0634f38cf897bbd6c7a1eae8b47d0151 956 Gene3D G3DSA:3.30.365.10 353 377 1.2E-37 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RG43_RS05375 0634f38cf897bbd6c7a1eae8b47d0151 956 Gene3D G3DSA:3.30.365.10 299 317 1.2E-37 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RG43_RS05375 0634f38cf897bbd6c7a1eae8b47d0151 956 Gene3D G3DSA:3.90.1170.50 176 297 2.6E-35 T 09-03-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RG43_RS05375 0634f38cf897bbd6c7a1eae8b47d0151 956 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 355 893 1.4E-148 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RG43_RS05375 0634f38cf897bbd6c7a1eae8b47d0151 956 SUPERFAMILY SSF47741 84 188 3.93E-17 T 09-03-2017 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RG43_RS05375 0634f38cf897bbd6c7a1eae8b47d0151 956 Gene3D G3DSA:3.30.365.10 378 480 1.3E-36 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RG43_RS05375 0634f38cf897bbd6c7a1eae8b47d0151 956 Gene3D G3DSA:3.30.365.10 811 955 2.5E-55 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RG43_RS05375 0634f38cf897bbd6c7a1eae8b47d0151 956 Gene3D G3DSA:3.30.365.10 559 652 2.5E-55 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RG43_RS05375 0634f38cf897bbd6c7a1eae8b47d0151 956 SUPERFAMILY SSF56003 302 318 1.13E-166 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RG43_RS05375 0634f38cf897bbd6c7a1eae8b47d0151 956 SUPERFAMILY SSF56003 354 955 1.13E-166 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RG43_RS05375 0634f38cf897bbd6c7a1eae8b47d0151 956 Pfam PF01799 [2Fe-2S] binding domain 73 144 9.3E-9 T 09-03-2017 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RG43_RS05375 0634f38cf897bbd6c7a1eae8b47d0151 956 SMART SM01008 186 298 1.8E-35 T 09-03-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RG43_RS05375 0634f38cf897bbd6c7a1eae8b47d0151 956 Gene3D G3DSA:1.10.150.120 73 175 8.0E-17 T 09-03-2017 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RG43_RS05375 0634f38cf897bbd6c7a1eae8b47d0151 956 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 187 297 2.8E-30 T 09-03-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RG43_RS05375 0634f38cf897bbd6c7a1eae8b47d0151 956 TIGRFAM TIGR03313 Se_sel_red_Mo: probable selenate reductase, molybdenum-binding subunit 5 955 0.0 T 09-03-2017 IPR017699 Molybdenum-binding protein YgfN/XdhD RG43_RS05375 0634f38cf897bbd6c7a1eae8b47d0151 956 Gene3D G3DSA:3.30.365.10 653 810 3.1E-43 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RG43_RS09100 fa3fd68ae673a52b4b7e2d81406310cd 231 Pfam PF04172 LrgB-like family 12 224 2.4E-79 T 09-03-2017 IPR007300 CidB/LrgB family RG43_RS09100 fa3fd68ae673a52b4b7e2d81406310cd 231 TIGRFAM TIGR00659 TIGR00659: TIGR00659 family protein 2 226 5.5E-110 T 09-03-2017 IPR005261 Conserved hypothetical protein CHP00659 RG43_RS06390 4ecbb5b02aeade50c2073131b3b3deea 166 Gene3D G3DSA:1.10.10.10 116 165 1.9E-13 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS06390 4ecbb5b02aeade50c2073131b3b3deea 166 Gene3D G3DSA:1.10.10.10 70 115 4.3E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS06390 4ecbb5b02aeade50c2073131b3b3deea 166 Hamap MF_01114 Regulatory protein RecX [recX]. 6 166 13.467 T 09-03-2017 IPR003783 Regulatory protein RecX GO:0006282 RG43_RS06390 4ecbb5b02aeade50c2073131b3b3deea 166 Gene3D G3DSA:1.10.10.10 13 69 1.2E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS06390 4ecbb5b02aeade50c2073131b3b3deea 166 Pfam PF02631 RecX family 50 162 2.8E-30 T 09-03-2017 IPR003783 Regulatory protein RecX GO:0006282 RG43_RS14535 bf175b8b27e0b0f0149dfaee2cbc710f 363 Gene3D G3DSA:3.10.20.30 268 363 2.5E-50 T 09-03-2017 IPR012675 Beta-grasp domain RG43_RS14535 bf175b8b27e0b0f0149dfaee2cbc710f 363 PIRSF PIRSF006641 1 363 7.6E-159 T 09-03-2017 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 RG43_RS14535 bf175b8b27e0b0f0149dfaee2cbc710f 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 2.1E-178 T 09-03-2017 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 RG43_RS14535 bf175b8b27e0b0f0149dfaee2cbc710f 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 1.4E-39 T 09-03-2017 IPR013029 Domain of unknown function DUF933 RG43_RS14535 bf175b8b27e0b0f0149dfaee2cbc710f 363 Gene3D G3DSA:1.10.150.300 131 200 9.3E-28 T 09-03-2017 IPR023192 TGS-like domain RG43_RS14535 bf175b8b27e0b0f0149dfaee2cbc710f 363 Gene3D G3DSA:3.40.50.300 4 130 6.8E-44 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS14535 bf175b8b27e0b0f0149dfaee2cbc710f 363 Gene3D G3DSA:3.40.50.300 201 267 6.8E-44 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS14535 bf175b8b27e0b0f0149dfaee2cbc710f 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.3E-34 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 RG43_RS14535 bf175b8b27e0b0f0149dfaee2cbc710f 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.3E-34 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 RG43_RS14535 bf175b8b27e0b0f0149dfaee2cbc710f 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.3E-34 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 RG43_RS14535 bf175b8b27e0b0f0149dfaee2cbc710f 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.3E-34 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 RG43_RS14535 bf175b8b27e0b0f0149dfaee2cbc710f 363 Pfam PF01926 50S ribosome-binding GTPase 5 121 3.5E-21 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 RG43_RS14535 bf175b8b27e0b0f0149dfaee2cbc710f 363 SUPERFAMILY SSF52540 3 301 3.54E-85 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS14535 bf175b8b27e0b0f0149dfaee2cbc710f 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 47.029 T 09-03-2017 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 RG43_RS14535 bf175b8b27e0b0f0149dfaee2cbc710f 363 SUPERFAMILY SSF81271 279 359 4.14E-36 T 09-03-2017 IPR012676 TGS-like KEGG: 00970+6.1.1.3 RG43_RS08675 e765c961e9a4373b01fc536a769d8c83 949 Pfam PF00072 Response regulator receiver domain 827 936 2.5E-29 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS08675 e765c961e9a4373b01fc536a769d8c83 949 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 581 690 1.5E-28 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS08675 e765c961e9a4373b01fc536a769d8c83 949 Gene3D G3DSA:1.10.287.130 473 520 2.4E-17 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS08675 e765c961e9a4373b01fc536a769d8c83 949 SUPERFAMILY SSF52172 824 947 2.7E-38 T 09-03-2017 IPR011006 CheY-like superfamily RG43_RS08675 e765c961e9a4373b01fc536a769d8c83 949 SMART SM00448 825 936 1.3E-37 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS08675 e765c961e9a4373b01fc536a769d8c83 949 Gene3D G3DSA:3.30.565.10 521 693 3.9E-47 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS08675 e765c961e9a4373b01fc536a769d8c83 949 Pfam PF09456 RcsC Alpha-Beta-Loop (ABL) 709 799 1.2E-34 T 09-03-2017 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal GO:0000160|GO:0004673|GO:0004871|GO:0005524|GO:0005886|GO:0006355|GO:0016021|GO:0018106 RG43_RS08675 e765c961e9a4373b01fc536a769d8c83 949 Hamap MF_00979 Sensor histidine kinase RcsC [rcsC]. 24 941 27.404 T 09-03-2017 IPR030856 Sensor histidine kinase RcsC GO:0000155|GO:0000160|GO:0016021|GO:0042710 RG43_RS08675 e765c961e9a4373b01fc536a769d8c83 949 SMART SM00388 469 534 1.7E-19 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS08675 e765c961e9a4373b01fc536a769d8c83 949 SUPERFAMILY SSF47384 453 535 2.16E-19 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS08675 e765c961e9a4373b01fc536a769d8c83 949 SMART SM00387 581 692 2.8E-38 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS08675 e765c961e9a4373b01fc536a769d8c83 949 Pfam PF00512 His Kinase A (phospho-acceptor) domain 469 533 5.1E-16 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS08675 e765c961e9a4373b01fc536a769d8c83 949 Gene3D G3DSA:3.30.450.20 417 472 1.7E-6 T 09-03-2017 RG43_RS08675 e765c961e9a4373b01fc536a769d8c83 949 SUPERFAMILY SSF55874 523 694 3.8E-48 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS08675 e765c961e9a4373b01fc536a769d8c83 949 PRINTS PR00344 Bacterial sensor protein C-terminal signature 617 631 4.8E-18 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS08675 e765c961e9a4373b01fc536a769d8c83 949 PRINTS PR00344 Bacterial sensor protein C-terminal signature 635 645 4.8E-18 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS08675 e765c961e9a4373b01fc536a769d8c83 949 PRINTS PR00344 Bacterial sensor protein C-terminal signature 652 670 4.8E-18 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS08675 e765c961e9a4373b01fc536a769d8c83 949 PRINTS PR00344 Bacterial sensor protein C-terminal signature 676 689 4.8E-18 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS08675 e765c961e9a4373b01fc536a769d8c83 949 SUPERFAMILY SSF52172 701 815 2.77E-42 T 09-03-2017 IPR011006 CheY-like superfamily RG43_RS08675 e765c961e9a4373b01fc536a769d8c83 949 Gene3D G3DSA:3.40.50.2300 822 946 8.4E-40 T 09-03-2017 RG43_RS16655 9dba05adf19b57bc3e2d2e4c321e812a 716 SMART SM00487 23 303 7.6E-6 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain RG43_RS16655 9dba05adf19b57bc3e2d2e4c321e812a 716 Pfam PF00270 DEAD/DEAH box helicase 31 95 1.3E-5 T 09-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RG43_RS16655 9dba05adf19b57bc3e2d2e4c321e812a 716 SMART SM00488 18 294 0.0062 T 09-03-2017 IPR006554 Helicase-like, DEXD box c2 type GO:0004003|GO:0016818 RG43_RS16655 9dba05adf19b57bc3e2d2e4c321e812a 716 Gene3D G3DSA:3.40.50.300 26 106 2.7E-17 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16655 9dba05adf19b57bc3e2d2e4c321e812a 716 Gene3D G3DSA:3.40.50.300 211 265 2.7E-17 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16655 9dba05adf19b57bc3e2d2e4c321e812a 716 Gene3D G3DSA:3.40.50.300 153 168 2.7E-17 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16655 9dba05adf19b57bc3e2d2e4c321e812a 716 SUPERFAMILY SSF52540 199 271 4.59E-17 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16655 9dba05adf19b57bc3e2d2e4c321e812a 716 SUPERFAMILY SSF52540 46 97 4.59E-17 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16655 9dba05adf19b57bc3e2d2e4c321e812a 716 SUPERFAMILY SSF52540 451 465 4.59E-17 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16655 9dba05adf19b57bc3e2d2e4c321e812a 716 SUPERFAMILY SSF52540 500 670 4.59E-17 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16655 9dba05adf19b57bc3e2d2e4c321e812a 716 Pfam PF13307 Helicase C-terminal domain 532 688 1.1E-23 T 09-03-2017 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 RG43_RS16655 9dba05adf19b57bc3e2d2e4c321e812a 716 SMART SM00491 544 676 4.0E-39 T 09-03-2017 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 RG43_RS16655 9dba05adf19b57bc3e2d2e4c321e812a 716 Pfam PF06733 DEAD_2 201 264 1.6E-7 T 09-03-2017 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 RG43_RS06320 e69d550fd317759a11ad33c49d3e88e4 750 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 11 738 0.0 T 09-03-2017 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 RG43_RS06320 e69d550fd317759a11ad33c49d3e88e4 750 SUPERFAMILY SSF55821 175 379 1.86E-45 T 09-03-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain RG43_RS06320 e69d550fd317759a11ad33c49d3e88e4 750 Pfam PF00708 Acylphosphatase 9 91 1.4E-17 T 09-03-2017 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RG43_RS06320 e69d550fd317759a11ad33c49d3e88e4 750 SUPERFAMILY SSF54975 8 91 8.29E-21 T 09-03-2017 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RG43_RS06320 e69d550fd317759a11ad33c49d3e88e4 750 Gene3D G3DSA:3.90.870.10 197 369 1.0E-45 T 09-03-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain RG43_RS06320 e69d550fd317759a11ad33c49d3e88e4 750 PIRSF PIRSF006256 4 748 4.4E-278 T 09-03-2017 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 RG43_RS06320 e69d550fd317759a11ad33c49d3e88e4 750 Pfam PF01300 Telomere recombination 210 373 3.4E-47 T 09-03-2017 IPR006070 YrdC-like domain GO:0003725 RG43_RS06320 e69d550fd317759a11ad33c49d3e88e4 750 Gene3D G3DSA:3.30.70.100 3 91 4.9E-28 T 09-03-2017 RG43_RS06320 e69d550fd317759a11ad33c49d3e88e4 750 ProSitePatterns PS00150 Acylphosphatase signature 1. 13 23 - T 09-03-2017 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RG43_RS06320 e69d550fd317759a11ad33c49d3e88e4 750 Pfam PF07503 HypF finger 158 191 5.8E-17 T 09-03-2017 IPR011125 Zinc finger, HypF-type GO:0008270 RG43_RS06320 e69d550fd317759a11ad33c49d3e88e4 750 Pfam PF07503 HypF finger 108 141 2.0E-15 T 09-03-2017 IPR011125 Zinc finger, HypF-type GO:0008270 RG43_RS09575 d6a0ba6bed90c6f7d54a08c3fbbcd213 373 SUPERFAMILY SSF51735 2 353 4.28E-90 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS09575 d6a0ba6bed90c6f7d54a08c3fbbcd213 373 Gene3D G3DSA:3.90.25.10 206 247 1.1E-52 T 09-03-2017 RG43_RS09575 d6a0ba6bed90c6f7d54a08c3fbbcd213 373 Gene3D G3DSA:3.90.25.10 304 363 1.1E-52 T 09-03-2017 RG43_RS09575 d6a0ba6bed90c6f7d54a08c3fbbcd213 373 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 3 356 56.612 T 09-03-2017 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 RG43_RS09575 d6a0ba6bed90c6f7d54a08c3fbbcd213 373 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 346 9.9E-162 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS09575 d6a0ba6bed90c6f7d54a08c3fbbcd213 373 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 3 353 3.1E-177 T 09-03-2017 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 RG43_RS09575 d6a0ba6bed90c6f7d54a08c3fbbcd213 373 Gene3D G3DSA:3.40.50.720 4 205 8.6E-49 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS02880 aabac501817d99051fc0f18a9d8d13f8 154 SUPERFAMILY SSF51197 1 152 1.9E-44 T 09-03-2017 RG43_RS02880 aabac501817d99051fc0f18a9d8d13f8 154 Gene3D G3DSA:2.60.120.370 1 152 2.4E-50 T 09-03-2017 IPR004375 YhcH/YjgK/YiaL family RG43_RS02880 aabac501817d99051fc0f18a9d8d13f8 154 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 153 1.2E-66 T 09-03-2017 IPR004375 YhcH/YjgK/YiaL family RG43_RS02880 aabac501817d99051fc0f18a9d8d13f8 154 Pfam PF04074 Domain of unknown function (DUF386) 1 149 4.5E-42 T 09-03-2017 IPR004375 YhcH/YjgK/YiaL family RG43_RS00555 b3b38f19ad5c7279777eac02209169d9 269 Gene3D G3DSA:3.20.190.10 2 129 7.1E-39 T 09-03-2017 RG43_RS00555 b3b38f19ad5c7279777eac02209169d9 269 SMART SM01232 129 221 3.8E-50 T 09-03-2017 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 RG43_RS00555 b3b38f19ad5c7279777eac02209169d9 269 Gene3D G3DSA:1.10.8.50 130 269 3.3E-51 T 09-03-2017 RG43_RS00555 b3b38f19ad5c7279777eac02209169d9 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 3.7E-108 T 09-03-2017 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 RG43_RS00555 b3b38f19ad5c7279777eac02209169d9 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 44.393 T 09-03-2017 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 RG43_RS00555 b3b38f19ad5c7279777eac02209169d9 269 SUPERFAMILY SSF57716 217 269 1.24E-16 T 09-03-2017 RG43_RS00555 b3b38f19ad5c7279777eac02209169d9 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 269 7.9E-8 T 09-03-2017 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 RG43_RS00555 b3b38f19ad5c7279777eac02209169d9 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 09-03-2017 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 RG43_RS00555 b3b38f19ad5c7279777eac02209169d9 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 1.8E-32 T 09-03-2017 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RG43_RS00555 b3b38f19ad5c7279777eac02209169d9 269 SUPERFAMILY SSF81624 2 138 4.84E-45 T 09-03-2017 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RG43_RS00555 b3b38f19ad5c7279777eac02209169d9 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 1.1E-31 T 09-03-2017 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 RG43_RS00555 b3b38f19ad5c7279777eac02209169d9 269 SMART SM00898 2 115 2.8E-55 T 09-03-2017 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RG43_RS00555 b3b38f19ad5c7279777eac02209169d9 269 SUPERFAMILY SSF46946 130 222 3.93E-31 T 09-03-2017 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 RG43_RS07290 2421f9ce637269efdde42df52115e903 513 SUPERFAMILY SSF53067 137 310 1.3E-47 T 09-03-2017 RG43_RS07290 2421f9ce637269efdde42df52115e903 513 SUPERFAMILY SSF109604 313 507 1.78E-58 T 09-03-2017 RG43_RS07290 2421f9ce637269efdde42df52115e903 513 PIRSF PIRSF001267 3 506 1.0E-204 T 09-03-2017 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 RG43_RS07290 2421f9ce637269efdde42df52115e903 513 Gene3D G3DSA:3.30.420.40 5 131 5.8E-41 T 09-03-2017 RG43_RS07290 2421f9ce637269efdde42df52115e903 513 Gene3D G3DSA:3.30.420.150 132 311 1.1E-52 T 09-03-2017 RG43_RS07290 2421f9ce637269efdde42df52115e903 513 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 13 306 3.9E-96 T 09-03-2017 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 RG43_RS07290 2421f9ce637269efdde42df52115e903 513 Pfam PF02541 Ppx/GppA phosphatase family 26 308 5.3E-105 T 09-03-2017 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 RG43_RS07290 2421f9ce637269efdde42df52115e903 513 SUPERFAMILY SSF53067 13 133 1.3E-35 T 09-03-2017 RG43_RS06735 8989fdf70ab358e03b4257100b848930 326 SMART SM00363 18 83 9.1E-14 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 RG43_RS06735 8989fdf70ab358e03b4257100b848930 326 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 09-03-2017 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 RG43_RS06735 8989fdf70ab358e03b4257100b848930 326 SUPERFAMILY SSF55120 77 323 9.87E-80 T 09-03-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RG43_RS06735 8989fdf70ab358e03b4257100b848930 326 Pfam PF00849 RNA pseudouridylate synthase 92 242 1.4E-31 T 09-03-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RG43_RS06735 8989fdf70ab358e03b4257100b848930 326 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 13 313 1.2E-111 T 09-03-2017 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 RG43_RS06735 8989fdf70ab358e03b4257100b848930 326 Gene3D G3DSA:3.10.290.10 18 68 5.7E-14 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 RG43_RS06735 8989fdf70ab358e03b4257100b848930 326 SUPERFAMILY SSF55174 17 69 6.39E-12 T 09-03-2017 RG43_RS06735 8989fdf70ab358e03b4257100b848930 326 Pfam PF01479 S4 domain 18 65 7.2E-13 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 RG43_RS24540 5d0aa330ec4243cea88625ac86c1d0a1 804 TIGRFAM TIGR01553 formate-DH-alph: formate dehydrogenase-N alpha subunit 1 803 0.0 T 09-03-2017 IPR006443 Formate dehydrogenase-N, alpha subunit GO:0008863|GO:0009055|GO:0043546|GO:0045333|GO:0047111 RG43_RS24540 5d0aa330ec4243cea88625ac86c1d0a1 804 SUPERFAMILY SSF53706 1 639 5.63E-231 T 09-03-2017 RG43_RS24540 5d0aa330ec4243cea88625ac86c1d0a1 804 Pfam PF01568 Molydopterin dinucleotide binding domain 682 797 3.4E-16 T 09-03-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RG43_RS24540 5d0aa330ec4243cea88625ac86c1d0a1 804 Gene3D G3DSA:3.40.228.10 152 261 1.3E-71 T 09-03-2017 RG43_RS24540 5d0aa330ec4243cea88625ac86c1d0a1 804 Gene3D G3DSA:3.40.228.10 1 108 1.3E-71 T 09-03-2017 RG43_RS24540 5d0aa330ec4243cea88625ac86c1d0a1 804 Gene3D G3DSA:3.40.50.740 320 470 3.4E-58 T 09-03-2017 RG43_RS24540 5d0aa330ec4243cea88625ac86c1d0a1 804 Gene3D G3DSA:2.40.40.20 605 804 8.5E-49 T 09-03-2017 RG43_RS24540 5d0aa330ec4243cea88625ac86c1d0a1 804 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 716 743 - T 09-03-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 RG43_RS24540 5d0aa330ec4243cea88625ac86c1d0a1 804 Pfam PF00384 Molybdopterin oxidoreductase 2 378 1.6E-20 T 09-03-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS24540 5d0aa330ec4243cea88625ac86c1d0a1 804 SUPERFAMILY SSF50692 675 804 2.07E-42 T 09-03-2017 IPR009010 Aspartate decarboxylase-like domain RG43_RS24540 5d0aa330ec4243cea88625ac86c1d0a1 804 SUPERFAMILY SSF50692 624 648 2.07E-42 T 09-03-2017 IPR009010 Aspartate decarboxylase-like domain RG43_RS15015 3230a4617692c8d542ce06fc74f4a248 729 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 49 - T 09-03-2017 IPR010916 TonB box, conserved site RG43_RS15015 3230a4617692c8d542ce06fc74f4a248 729 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 712 729 - T 09-03-2017 IPR010917 TonB-dependent receptor, conserved site RG43_RS15015 3230a4617692c8d542ce06fc74f4a248 729 Pfam PF00593 TonB dependent receptor 493 728 5.9E-31 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RG43_RS15015 3230a4617692c8d542ce06fc74f4a248 729 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 77 729 2.5E-178 T 09-03-2017 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 RG43_RS15015 3230a4617692c8d542ce06fc74f4a248 729 Gene3D G3DSA:2.170.130.10 55 183 2.5E-32 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RG43_RS15015 3230a4617692c8d542ce06fc74f4a248 729 SUPERFAMILY SSF56935 33 729 4.12E-121 T 09-03-2017 RG43_RS15015 3230a4617692c8d542ce06fc74f4a248 729 Gene3D G3DSA:2.40.170.20 192 729 4.4E-134 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RG43_RS15015 3230a4617692c8d542ce06fc74f4a248 729 Pfam PF07715 TonB-dependent Receptor Plug Domain 75 175 1.3E-13 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RG43_RS07140 0c6ae0f118e604e1b28459f77ed7f684 616 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 332 346 - T 09-03-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 RG43_RS07140 0c6ae0f118e604e1b28459f77ed7f684 616 Gene3D G3DSA:1.20.1270.10 529 615 1.9E-33 T 09-03-2017 IPR029048 Heat shock protein 70kD, C-terminal domain Reactome: R-HSA-3371453 RG43_RS07140 0c6ae0f118e604e1b28459f77ed7f684 616 Gene3D G3DSA:3.30.420.40 314 356 9.8E-32 T 09-03-2017 RG43_RS07140 0c6ae0f118e604e1b28459f77ed7f684 616 Gene3D G3DSA:3.30.420.40 201 238 9.8E-32 T 09-03-2017 RG43_RS07140 0c6ae0f118e604e1b28459f77ed7f684 616 Gene3D G3DSA:3.30.420.40 20 87 1.7E-52 T 09-03-2017 RG43_RS07140 0c6ae0f118e604e1b28459f77ed7f684 616 Gene3D G3DSA:3.30.420.40 128 200 1.7E-52 T 09-03-2017 RG43_RS07140 0c6ae0f118e604e1b28459f77ed7f684 616 SUPERFAMILY SSF100934 504 615 3.73E-37 T 09-03-2017 IPR029048 Heat shock protein 70kD, C-terminal domain Reactome: R-HSA-3371453 RG43_RS07140 0c6ae0f118e604e1b28459f77ed7f684 616 SUPERFAMILY SSF53067 200 377 4.37E-53 T 09-03-2017 RG43_RS07140 0c6ae0f118e604e1b28459f77ed7f684 616 PRINTS PR00301 70kDa heat shock protein signature 329 345 2.9E-54 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RG43_RS07140 0c6ae0f118e604e1b28459f77ed7f684 616 PRINTS PR00301 70kDa heat shock protein signature 385 404 2.9E-54 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RG43_RS07140 0c6ae0f118e604e1b28459f77ed7f684 616 PRINTS PR00301 70kDa heat shock protein signature 20 33 2.9E-54 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RG43_RS07140 0c6ae0f118e604e1b28459f77ed7f684 616 PRINTS PR00301 70kDa heat shock protein signature 360 380 2.9E-54 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RG43_RS07140 0c6ae0f118e604e1b28459f77ed7f684 616 PRINTS PR00301 70kDa heat shock protein signature 466 482 2.9E-54 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RG43_RS07140 0c6ae0f118e604e1b28459f77ed7f684 616 PRINTS PR00301 70kDa heat shock protein signature 48 60 2.9E-54 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RG43_RS07140 0c6ae0f118e604e1b28459f77ed7f684 616 PRINTS PR00301 70kDa heat shock protein signature 152 172 2.9E-54 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RG43_RS07140 0c6ae0f118e604e1b28459f77ed7f684 616 PRINTS PR00301 70kDa heat shock protein signature 211 221 2.9E-54 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RG43_RS07140 0c6ae0f118e604e1b28459f77ed7f684 616 SUPERFAMILY SSF53067 20 196 2.2E-49 T 09-03-2017 RG43_RS07140 0c6ae0f118e604e1b28459f77ed7f684 616 Gene3D G3DSA:3.30.30.30 88 127 5.5E-10 T 09-03-2017 RG43_RS07140 0c6ae0f118e604e1b28459f77ed7f684 616 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 616 45.717 T 09-03-2017 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 RG43_RS07140 0c6ae0f118e604e1b28459f77ed7f684 616 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 615 8.1E-272 T 09-03-2017 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 RG43_RS07140 0c6ae0f118e604e1b28459f77ed7f684 616 Gene3D G3DSA:3.90.640.10 239 310 2.8E-10 T 09-03-2017 RG43_RS07140 0c6ae0f118e604e1b28459f77ed7f684 616 SUPERFAMILY SSF100920 384 535 4.58E-50 T 09-03-2017 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 RG43_RS07140 0c6ae0f118e604e1b28459f77ed7f684 616 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 09-03-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 RG43_RS07140 0c6ae0f118e604e1b28459f77ed7f684 616 Pfam PF00012 Hsp70 protein 22 600 2.3E-204 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RG43_RS07140 0c6ae0f118e604e1b28459f77ed7f684 616 Gene3D G3DSA:2.60.34.10 387 528 6.2E-55 T 09-03-2017 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 RG43_RS07140 0c6ae0f118e604e1b28459f77ed7f684 616 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 09-03-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 RG43_RS17610 aaf2d3f971ddc7176eaa75c9506a58ab 190 Pfam PF02669 K+-transporting ATPase, c chain 5 187 1.8E-68 T 09-03-2017 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 RG43_RS17610 aaf2d3f971ddc7176eaa75c9506a58ab 190 PIRSF PIRSF001296 1 190 4.2E-74 T 09-03-2017 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 RG43_RS17610 aaf2d3f971ddc7176eaa75c9506a58ab 190 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 1 188 33.489 T 09-03-2017 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 RG43_RS17610 aaf2d3f971ddc7176eaa75c9506a58ab 190 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 2 188 7.4E-101 T 09-03-2017 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 RG43_RS20570 f369c1cc4527ec97cea54884560049be 713 Gene3D G3DSA:3.40.640.10 130 423 3.1E-99 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS20570 f369c1cc4527ec97cea54884560049be 713 SUPERFAMILY SSF55904 566 708 2.88E-43 T 09-03-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 RG43_RS20570 f369c1cc4527ec97cea54884560049be 713 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 130 545 1.0E-194 T 09-03-2017 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 RG43_RS20570 f369c1cc4527ec97cea54884560049be 713 SUPERFAMILY SSF53383 130 562 3.07E-102 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS20570 f369c1cc4527ec97cea54884560049be 713 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 14 124 5.8E-27 T 09-03-2017 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 RG43_RS20570 f369c1cc4527ec97cea54884560049be 713 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 570 700 1.9E-46 T 09-03-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 RG43_RS20570 f369c1cc4527ec97cea54884560049be 713 Gene3D G3DSA:3.90.100.10 587 709 5.2E-38 T 09-03-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 RG43_RS20570 f369c1cc4527ec97cea54884560049be 713 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 09-03-2017 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 RG43_RS20570 f369c1cc4527ec97cea54884560049be 713 Gene3D G3DSA:3.90.1150.10 426 586 9.1E-66 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RG43_RS20570 f369c1cc4527ec97cea54884560049be 713 PIRSF PIRSF009393 1 712 3.0E-280 T 09-03-2017 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 RG43_RS02170 6dec421aecff53c08f79dd15432e59cb 134 SUPERFAMILY SSF82784 1 132 1.96E-43 T 09-03-2017 IPR003718 OsmC/Ohr family RG43_RS02170 6dec421aecff53c08f79dd15432e59cb 134 Pfam PF02566 OsmC-like protein 30 127 2.8E-19 T 09-03-2017 IPR003718 OsmC/Ohr family RG43_RS02170 6dec421aecff53c08f79dd15432e59cb 134 Gene3D G3DSA:2.20.25.10 1 34 2.7E-19 T 09-03-2017 RG43_RS02170 6dec421aecff53c08f79dd15432e59cb 134 Gene3D G3DSA:3.30.300.20 35 132 2.1E-43 T 09-03-2017 IPR015946 K homology domain-like, alpha/beta RG43_RS03225 d1fa044aa34de685591f3f6660a3c403 191 Pfam PF04972 BON domain 124 188 3.2E-18 T 09-03-2017 IPR007055 BON domain RG43_RS03225 d1fa044aa34de685591f3f6660a3c403 191 Pfam PF04972 BON domain 46 113 2.8E-14 T 09-03-2017 IPR007055 BON domain RG43_RS03225 d1fa044aa34de685591f3f6660a3c403 191 SMART SM00749 129 191 9.4E-7 T 09-03-2017 IPR014004 Transport-associated and nodulation domain, bacteria RG43_RS03225 d1fa044aa34de685591f3f6660a3c403 191 SMART SM00749 51 114 8.0E-13 T 09-03-2017 IPR014004 Transport-associated and nodulation domain, bacteria RG43_RS07055 d5b99aaccb74912ff045ab72909bc3e4 140 Pfam PF07681 DoxX 16 97 1.6E-16 T 09-03-2017 IPR032808 DoxX family RG43_RS07815 2503d8f9404241c0b2ed5056946f4809 361 PRINTS PR00599 Methionine aminopeptidase-1 signature 207 223 5.8E-5 T 09-03-2017 IPR001714 Peptidase M24, methionine aminopeptidase RG43_RS07815 2503d8f9404241c0b2ed5056946f4809 361 PRINTS PR00599 Methionine aminopeptidase-1 signature 310 322 5.8E-5 T 09-03-2017 IPR001714 Peptidase M24, methionine aminopeptidase RG43_RS07815 2503d8f9404241c0b2ed5056946f4809 361 Pfam PF00557 Metallopeptidase family M24 134 342 3.9E-65 T 09-03-2017 IPR000994 Peptidase M24, structural domain RG43_RS07815 2503d8f9404241c0b2ed5056946f4809 361 Gene3D G3DSA:3.90.230.10 127 355 1.1E-83 T 09-03-2017 IPR000994 Peptidase M24, structural domain RG43_RS07815 2503d8f9404241c0b2ed5056946f4809 361 SUPERFAMILY SSF55920 127 355 1.2E-76 T 09-03-2017 IPR000994 Peptidase M24, structural domain RG43_RS07815 2503d8f9404241c0b2ed5056946f4809 361 SUPERFAMILY SSF53092 7 127 1.74E-13 T 09-03-2017 IPR028980 Creatinase/Aminopeptidase P, N-terminal RG43_RS07815 2503d8f9404241c0b2ed5056946f4809 361 Gene3D G3DSA:3.40.350.10 4 123 7.1E-15 T 09-03-2017 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal RG43_RS07815 2503d8f9404241c0b2ed5056946f4809 361 Pfam PF01321 Creatinase/Prolidase N-terminal domain 4 123 6.5E-15 T 09-03-2017 IPR000587 Creatinase, N-terminal GO:0016787 RG43_RS15250 c7aa224648b2c0d69c21c2f6fed97c1d 215 SUPERFAMILY SSF52833 1 78 1.1E-19 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS15250 c7aa224648b2c0d69c21c2f6fed97c1d 215 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 74 1.9E-12 T 09-03-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RG43_RS15250 c7aa224648b2c0d69c21c2f6fed97c1d 215 SUPERFAMILY SSF47616 76 215 7.14E-49 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like RG43_RS15250 c7aa224648b2c0d69c21c2f6fed97c1d 215 TIGRFAM TIGR02182 GRXB: glutaredoxin, GrxB family 2 210 7.2E-104 T 09-03-2017 IPR011901 Glutaredoxin, GrxB GO:0009055|GO:0015035 RG43_RS15250 c7aa224648b2c0d69c21c2f6fed97c1d 215 Pfam PF04399 Glutaredoxin 2, C terminal domain 86 214 4.6E-49 T 09-03-2017 IPR007494 Glutaredoxin 2, C-terminal RG43_RS15250 c7aa224648b2c0d69c21c2f6fed97c1d 215 Gene3D G3DSA:1.20.1050.10 90 215 2.3E-50 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like RG43_RS15250 c7aa224648b2c0d69c21c2f6fed97c1d 215 Gene3D G3DSA:3.40.30.10 8 83 3.3E-31 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS15250 c7aa224648b2c0d69c21c2f6fed97c1d 215 ProSitePatterns PS00195 Glutaredoxin active site. 3 18 - T 09-03-2017 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 RG43_RS11660 6406243726581c54293bd5e67c2cf890 119 Pfam PF09313 Domain of unknown function (DUF1971) 12 96 5.6E-24 T 09-03-2017 IPR015392 Domain of unknown function DUF1971 RG43_RS11660 6406243726581c54293bd5e67c2cf890 119 SUPERFAMILY SSF51197 1 106 6.59E-35 T 09-03-2017 RG43_RS11660 6406243726581c54293bd5e67c2cf890 119 PIRSF PIRSF020632 1 119 2.3E-57 T 09-03-2017 IPR014510 Tellurite resistance predicted, YeaR RG43_RS11660 6406243726581c54293bd5e67c2cf890 119 Gene3D G3DSA:2.60.120.10 1 117 2.1E-45 T 09-03-2017 IPR014710 RmlC-like jelly roll fold RG43_RS25545 e8206af6d136f9a3df3bdd0e45c5405e 464 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 357 365 - T 09-03-2017 IPR018120 Glycoside hydrolase family 1, active site RG43_RS25545 e8206af6d136f9a3df3bdd0e45c5405e 464 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 09-03-2017 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site RG43_RS25545 e8206af6d136f9a3df3bdd0e45c5405e 464 Gene3D G3DSA:3.20.20.80 3 462 2.8E-147 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RG43_RS25545 e8206af6d136f9a3df3bdd0e45c5405e 464 PRINTS PR00131 Glycosyl hydrolase family 1 signature 378 389 2.0E-16 T 09-03-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 RG43_RS25545 e8206af6d136f9a3df3bdd0e45c5405e 464 PRINTS PR00131 Glycosyl hydrolase family 1 signature 399 416 2.0E-16 T 09-03-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 RG43_RS25545 e8206af6d136f9a3df3bdd0e45c5405e 464 PRINTS PR00131 Glycosyl hydrolase family 1 signature 424 436 2.0E-16 T 09-03-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 RG43_RS25545 e8206af6d136f9a3df3bdd0e45c5405e 464 PRINTS PR00131 Glycosyl hydrolase family 1 signature 291 305 2.0E-16 T 09-03-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 RG43_RS25545 e8206af6d136f9a3df3bdd0e45c5405e 464 PRINTS PR00131 Glycosyl hydrolase family 1 signature 357 365 2.0E-16 T 09-03-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 RG43_RS25545 e8206af6d136f9a3df3bdd0e45c5405e 464 SUPERFAMILY SSF51445 2 460 2.2E-159 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily RG43_RS25545 e8206af6d136f9a3df3bdd0e45c5405e 464 Pfam PF00232 Glycosyl hydrolase family 1 2 459 4.8E-154 T 09-03-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 RG43_RS11245 b9e5f42886aa37d5e491b1818f86e0e6 336 SUPERFAMILY SSF52540 23 255 1.06E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS11245 b9e5f42886aa37d5e491b1818f86e0e6 336 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 329 4.3E-33 T 09-03-2017 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 RG43_RS11245 b9e5f42886aa37d5e491b1818f86e0e6 336 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 27 329 3.8E-147 T 09-03-2017 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 RG43_RS11245 b9e5f42886aa37d5e491b1818f86e0e6 336 SUPERFAMILY SSF46785 260 333 3.59E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS11245 b9e5f42886aa37d5e491b1818f86e0e6 336 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 331 1.0E-40 T 09-03-2017 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 RG43_RS11245 b9e5f42886aa37d5e491b1818f86e0e6 336 Gene3D G3DSA:1.10.10.10 260 330 1.4E-35 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS11245 b9e5f42886aa37d5e491b1818f86e0e6 336 Gene3D G3DSA:3.40.50.300 23 178 2.9E-33 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS11245 b9e5f42886aa37d5e491b1818f86e0e6 336 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 8 238 1.9E-115 T 09-03-2017 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 RG43_RS11245 b9e5f42886aa37d5e491b1818f86e0e6 336 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 336 184.752 T 09-03-2017 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 RG43_RS11245 b9e5f42886aa37d5e491b1818f86e0e6 336 Gene3D G3DSA:1.10.8.60 187 258 7.3E-33 T 09-03-2017 RG43_RS11245 b9e5f42886aa37d5e491b1818f86e0e6 336 SMART SM00382 54 181 1.3E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS04010 0d4c39db9daab88884da9237530e7514 275 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 15 261 43.006 T 09-03-2017 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 RG43_RS04010 0d4c39db9daab88884da9237530e7514 275 Gene3D G3DSA:3.60.21.10 14 258 7.4E-42 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like RG43_RS04010 0d4c39db9daab88884da9237530e7514 275 Pfam PF00149 Calcineurin-like phosphoesterase 16 206 4.6E-20 T 09-03-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RG43_RS04010 0d4c39db9daab88884da9237530e7514 275 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 206 261 9.0E-27 T 09-03-2017 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 RG43_RS04010 0d4c39db9daab88884da9237530e7514 275 SUPERFAMILY SSF56300 16 269 1.27E-61 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like RG43_RS26385 0d4c39db9daab88884da9237530e7514 275 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 15 261 43.006 T 09-03-2017 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 RG43_RS26385 0d4c39db9daab88884da9237530e7514 275 Gene3D G3DSA:3.60.21.10 14 258 7.4E-42 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like RG43_RS26385 0d4c39db9daab88884da9237530e7514 275 Pfam PF00149 Calcineurin-like phosphoesterase 16 206 4.6E-20 T 09-03-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RG43_RS26385 0d4c39db9daab88884da9237530e7514 275 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 206 261 9.0E-27 T 09-03-2017 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 RG43_RS26385 0d4c39db9daab88884da9237530e7514 275 SUPERFAMILY SSF56300 16 269 1.27E-61 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like RG43_RS09150 68d7cc94ba10c57321cb650fb5202f29 571 Gene3D G3DSA:3.30.1370.20 435 519 3.4E-47 T 09-03-2017 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 RG43_RS09150 68d7cc94ba10c57321cb650fb5202f29 571 Gene3D G3DSA:3.30.465.10 107 268 6.1E-84 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RG43_RS09150 68d7cc94ba10c57321cb650fb5202f29 571 PIRSF PIRSF000101 4 569 0.0 T 09-03-2017 IPR012256 D-lactate dehydrogenase GO:0004457|GO:0005887|GO:0006089|GO:0050660|GO:0051287 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 RG43_RS09150 68d7cc94ba10c57321cb650fb5202f29 571 SUPERFAMILY SSF55103 275 567 1.68E-118 T 09-03-2017 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RG43_RS09150 68d7cc94ba10c57321cb650fb5202f29 571 SUPERFAMILY SSF56176 10 271 6.07E-74 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RG43_RS09150 68d7cc94ba10c57321cb650fb5202f29 571 Gene3D G3DSA:3.30.70.610 377 434 6.7E-21 T 09-03-2017 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 RG43_RS09150 68d7cc94ba10c57321cb650fb5202f29 571 Gene3D G3DSA:3.30.70.610 269 342 2.3E-25 T 09-03-2017 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 RG43_RS09150 68d7cc94ba10c57321cb650fb5202f29 571 Pfam PF09330 D-lactate dehydrogenase, membrane binding 278 567 7.1E-148 T 09-03-2017 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 RG43_RS09150 68d7cc94ba10c57321cb650fb5202f29 571 Pfam PF01565 FAD binding domain 47 166 5.3E-8 T 09-03-2017 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RG43_RS09150 68d7cc94ba10c57321cb650fb5202f29 571 Gene3D G3DSA:3.30.43.10 8 101 1.5E-8 T 09-03-2017 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RG43_RS22260 ea0ad17aa72c23b18561f2ebe3122f05 898 Pfam PF00122 E1-E2 ATPase 123 362 1.3E-59 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 RG43_RS22260 ea0ad17aa72c23b18561f2ebe3122f05 898 Gene3D G3DSA:2.70.150.10 60 97 1.3E-43 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 RG43_RS22260 ea0ad17aa72c23b18561f2ebe3122f05 898 Gene3D G3DSA:2.70.150.10 150 271 1.3E-43 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 RG43_RS22260 ea0ad17aa72c23b18561f2ebe3122f05 898 SMART SM00831 44 117 1.4E-7 T 09-03-2017 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 RG43_RS22260 ea0ad17aa72c23b18561f2ebe3122f05 898 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 373 379 - T 09-03-2017 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 RG43_RS22260 ea0ad17aa72c23b18561f2ebe3122f05 898 SUPERFAMILY SSF81653 168 270 2.88E-29 T 09-03-2017 RG43_RS22260 ea0ad17aa72c23b18561f2ebe3122f05 898 SUPERFAMILY SSF56784 532 683 5.76E-38 T 09-03-2017 IPR023214 HAD-like domain RG43_RS22260 ea0ad17aa72c23b18561f2ebe3122f05 898 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 123 407 1.9E-38 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 RG43_RS22260 ea0ad17aa72c23b18561f2ebe3122f05 898 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 606 728 5.1E-31 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 RG43_RS22260 ea0ad17aa72c23b18561f2ebe3122f05 898 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 34 898 0.0 T 09-03-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 RG43_RS22260 ea0ad17aa72c23b18561f2ebe3122f05 898 Pfam PF00690 Cation transporter/ATPase, N-terminus 48 112 3.0E-15 T 09-03-2017 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 RG43_RS22260 ea0ad17aa72c23b18561f2ebe3122f05 898 PRINTS PR01836 Magnesium-transporting ATPase signature 301 320 2.4E-85 T 09-03-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 RG43_RS22260 ea0ad17aa72c23b18561f2ebe3122f05 898 PRINTS PR01836 Magnesium-transporting ATPase signature 852 873 2.4E-85 T 09-03-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 RG43_RS22260 ea0ad17aa72c23b18561f2ebe3122f05 898 PRINTS PR01836 Magnesium-transporting ATPase signature 284 300 2.4E-85 T 09-03-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 RG43_RS22260 ea0ad17aa72c23b18561f2ebe3122f05 898 PRINTS PR01836 Magnesium-transporting ATPase signature 697 712 2.4E-85 T 09-03-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 RG43_RS22260 ea0ad17aa72c23b18561f2ebe3122f05 898 PRINTS PR01836 Magnesium-transporting ATPase signature 405 418 2.4E-85 T 09-03-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 RG43_RS22260 ea0ad17aa72c23b18561f2ebe3122f05 898 PRINTS PR01836 Magnesium-transporting ATPase signature 715 726 2.4E-85 T 09-03-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 RG43_RS22260 ea0ad17aa72c23b18561f2ebe3122f05 898 PRINTS PR01836 Magnesium-transporting ATPase signature 802 823 2.4E-85 T 09-03-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 RG43_RS22260 ea0ad17aa72c23b18561f2ebe3122f05 898 PRINTS PR01836 Magnesium-transporting ATPase signature 747 760 2.4E-85 T 09-03-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 RG43_RS22260 ea0ad17aa72c23b18561f2ebe3122f05 898 PRINTS PR01836 Magnesium-transporting ATPase signature 767 783 2.4E-85 T 09-03-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 RG43_RS22260 ea0ad17aa72c23b18561f2ebe3122f05 898 Gene3D G3DSA:3.40.1110.10 363 546 1.1E-37 T 09-03-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 RG43_RS22260 ea0ad17aa72c23b18561f2ebe3122f05 898 Gene3D G3DSA:1.20.1110.10 98 149 6.5E-70 T 09-03-2017 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 RG43_RS22260 ea0ad17aa72c23b18561f2ebe3122f05 898 Gene3D G3DSA:1.20.1110.10 608 890 6.5E-70 T 09-03-2017 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 RG43_RS22260 ea0ad17aa72c23b18561f2ebe3122f05 898 Pfam PF00702 haloacid dehalogenase-like hydrolase 367 653 1.5E-19 T 09-03-2017 RG43_RS22260 ea0ad17aa72c23b18561f2ebe3122f05 898 SUPERFAMILY SSF81665 272 365 3.14E-105 T 09-03-2017 RG43_RS22260 ea0ad17aa72c23b18561f2ebe3122f05 898 SUPERFAMILY SSF81665 46 155 3.14E-105 T 09-03-2017 RG43_RS22260 ea0ad17aa72c23b18561f2ebe3122f05 898 SUPERFAMILY SSF81665 688 896 3.14E-105 T 09-03-2017 RG43_RS22260 ea0ad17aa72c23b18561f2ebe3122f05 898 Pfam PF00689 Cation transporting ATPase, C-terminus 722 888 4.0E-14 T 09-03-2017 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 RG43_RS22260 ea0ad17aa72c23b18561f2ebe3122f05 898 SUPERFAMILY SSF81660 340 543 2.07E-41 T 09-03-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 RG43_RS13810 d23eeaf1b9bffbd5466055cb23947e81 219 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 4 190 1.5E-69 T 09-03-2017 IPR010976 Beta-phosphoglucomutase hydrolase RG43_RS13810 d23eeaf1b9bffbd5466055cb23947e81 219 TIGRFAM TIGR01990 bPGM: beta-phosphoglucomutase 3 191 2.6E-82 T 09-03-2017 IPR010972 Beta-phosphoglucomutase GO:0000287|GO:0005975|GO:0008801 KEGG: 00500+5.4.2.6|MetaCyc: PWY-2721|MetaCyc: PWY-2722|MetaCyc: PWY-6317|MetaCyc: PWY-7459 RG43_RS13810 d23eeaf1b9bffbd5466055cb23947e81 219 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 64 190 9.7E-20 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RG43_RS13810 d23eeaf1b9bffbd5466055cb23947e81 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 189 1.8E-23 T 09-03-2017 IPR023214 HAD-like domain RG43_RS13810 d23eeaf1b9bffbd5466055cb23947e81 219 Gene3D G3DSA:3.40.50.1000 1 16 5.6E-32 T 09-03-2017 IPR023214 HAD-like domain RG43_RS13810 d23eeaf1b9bffbd5466055cb23947e81 219 Gene3D G3DSA:3.40.50.1000 96 208 5.6E-32 T 09-03-2017 IPR023214 HAD-like domain RG43_RS13810 d23eeaf1b9bffbd5466055cb23947e81 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 134 150 3.7E-5 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RG43_RS13810 d23eeaf1b9bffbd5466055cb23947e81 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 3.7E-5 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RG43_RS13810 d23eeaf1b9bffbd5466055cb23947e81 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 152 172 3.7E-5 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RG43_RS13810 d23eeaf1b9bffbd5466055cb23947e81 219 SUPERFAMILY SSF56784 3 198 9.47E-43 T 09-03-2017 IPR023214 HAD-like domain RG43_RS13810 d23eeaf1b9bffbd5466055cb23947e81 219 Gene3D G3DSA:1.10.150.240 17 92 2.3E-28 T 09-03-2017 IPR023198 Phosphoglycolate phosphatase, domain 2 RG43_RS07070 f28ad39557289061743829a0c5dd4184 106 SUPERFAMILY SSF50022 1 103 3.54E-29 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RG43_RS07070 f28ad39557289061743829a0c5dd4184 106 Hamap MF_01650 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit [hcaC]. 1 106 45.087 T 09-03-2017 IPR023739 3-phenylpropionate/cinnamic acid dioxygenase, ferredoxin subunit RG43_RS07070 f28ad39557289061743829a0c5dd4184 106 Gene3D G3DSA:2.102.10.10 2 104 4.3E-31 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RG43_RS07070 f28ad39557289061743829a0c5dd4184 106 Pfam PF00355 Rieske [2Fe-2S] domain 4 89 7.9E-18 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RG43_RS03040 66467dd515a8ec1579ad2689f8543f63 321 SUPERFAMILY SSF103481 41 143 2.62E-12 T 09-03-2017 RG43_RS03040 66467dd515a8ec1579ad2689f8543f63 321 Pfam PF00892 EamA-like transporter family 7 142 1.1E-28 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 RG43_RS03040 66467dd515a8ec1579ad2689f8543f63 321 Pfam PF00892 EamA-like transporter family 159 291 8.6E-17 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 RG43_RS08635 4d133c6693ccd5bda928f92b6d4d7831 549 SUPERFAMILY SSF56601 51 225 8.19E-8 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like RG43_RS08635 4d133c6693ccd5bda928f92b6d4d7831 549 Pfam PF08486 Stage II sporulation protein 312 375 3.1E-5 T 09-03-2017 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal RG43_RS08635 4d133c6693ccd5bda928f92b6d4d7831 549 Pfam PF10062 Predicted secreted protein (DUF2300) 84 205 2.8E-38 T 09-03-2017 IPR018748 Domain of unknown function DUF2300, secreted RG43_RS08635 4d133c6693ccd5bda928f92b6d4d7831 549 Pfam PF10062 Predicted secreted protein (DUF2300) 412 531 3.2E-41 T 09-03-2017 IPR018748 Domain of unknown function DUF2300, secreted RG43_RS10160 f4792a6fcd9adb9791b54aaf241b5d1b 673 Gene3D G3DSA:2.170.130.10 22 152 2.6E-25 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RG43_RS10160 f4792a6fcd9adb9791b54aaf241b5d1b 673 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 50 672 1.0E-148 T 09-03-2017 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 RG43_RS10160 f4792a6fcd9adb9791b54aaf241b5d1b 673 Gene3D G3DSA:2.40.170.20 153 672 4.7E-73 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RG43_RS10160 f4792a6fcd9adb9791b54aaf241b5d1b 673 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 149 1.8E-14 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RG43_RS10160 f4792a6fcd9adb9791b54aaf241b5d1b 673 SUPERFAMILY SSF56935 19 672 6.54E-94 T 09-03-2017 RG43_RS10160 f4792a6fcd9adb9791b54aaf241b5d1b 673 Pfam PF00593 TonB dependent receptor 434 669 3.8E-29 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RG43_RS21435 e4b4ff00a9751ee312127b3d49762969 938 SUPERFAMILY SSF47323 652 929 1.05E-79 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS21435 e4b4ff00a9751ee312127b3d49762969 938 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 641 2.6E-242 T 09-03-2017 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS21435 e4b4ff00a9751ee312127b3d49762969 938 Pfam PF08264 Anticodon-binding domain of tRNA 685 840 2.7E-27 T 09-03-2017 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 RG43_RS21435 e4b4ff00a9751ee312127b3d49762969 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 401 416 5.6E-33 T 09-03-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 RG43_RS21435 e4b4ff00a9751ee312127b3d49762969 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 526 539 5.6E-33 T 09-03-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 RG43_RS21435 e4b4ff00a9751ee312127b3d49762969 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 238 261 5.6E-33 T 09-03-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 RG43_RS21435 e4b4ff00a9751ee312127b3d49762969 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 5.6E-33 T 09-03-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 RG43_RS21435 e4b4ff00a9751ee312127b3d49762969 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 561 570 5.6E-33 T 09-03-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 RG43_RS21435 e4b4ff00a9751ee312127b3d49762969 938 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 09-03-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS21435 e4b4ff00a9751ee312127b3d49762969 938 Gene3D G3DSA:1.10.730.10 641 827 2.9E-43 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS21435 e4b4ff00a9751ee312127b3d49762969 938 SUPERFAMILY SSF52374 403 648 7.1E-137 T 09-03-2017 RG43_RS21435 e4b4ff00a9751ee312127b3d49762969 938 SUPERFAMILY SSF52374 3 202 7.1E-137 T 09-03-2017 RG43_RS21435 e4b4ff00a9751ee312127b3d49762969 938 Gene3D G3DSA:3.40.50.620 17 205 1.1E-134 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS21435 e4b4ff00a9751ee312127b3d49762969 938 Gene3D G3DSA:3.40.50.620 403 636 1.1E-134 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS21435 e4b4ff00a9751ee312127b3d49762969 938 Pfam PF06827 Zinc finger found in FPG and IleRS 898 926 2.2E-9 T 09-03-2017 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 RG43_RS21435 e4b4ff00a9751ee312127b3d49762969 938 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 929 21.599 T 09-03-2017 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 RG43_RS21435 e4b4ff00a9751ee312127b3d49762969 938 SUPERFAMILY SSF50677 204 403 4.19E-56 T 09-03-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 RG43_RS21435 e4b4ff00a9751ee312127b3d49762969 938 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 843 0.0 T 09-03-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 RG43_RS21435 e4b4ff00a9751ee312127b3d49762969 938 Gene3D G3DSA:3.90.740.10 206 389 3.7E-58 T 09-03-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 RG43_RS03330 f2ca5285d5abe6715c61946b18889909 523 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 119 521 2.3E-146 T 09-03-2017 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 RG43_RS03330 f2ca5285d5abe6715c61946b18889909 523 SMART SM00858 22 92 5.2E-14 T 09-03-2017 IPR013974 SAF domain Reactome: R-HSA-4085001 RG43_RS03330 f2ca5285d5abe6715c61946b18889909 523 Hamap MF_02031 Galactarate dehydratase (L-threo-forming) [garD]. 2 523 79.186 T 09-03-2017 IPR032893 Galactarate dehydratase (L-threo-forming) GarD, Enterobacteriaceae GO:0008867|GO:0046392 KEGG: 00053+4.2.1.42|MetaCyc: PWY-6497 RG43_RS03330 f2ca5285d5abe6715c61946b18889909 523 Pfam PF08666 SAF domain 22 91 2.5E-13 T 09-03-2017 IPR013974 SAF domain Reactome: R-HSA-4085001 RG43_RS03330 f2ca5285d5abe6715c61946b18889909 523 TIGRFAM TIGR03248 galactar-dH20: galactarate dehydratase 15 523 3.5E-283 T 09-03-2017 IPR017654 Galactarate dehydratase GarD-like GO:0008867|GO:0046392 KEGG: 00053+4.2.1.42|MetaCyc: PWY-6497 RG43_RS25485 8eb8a531f4114f63cd42e84dd39b2cf4 609 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 609 5.2E-271 T 09-03-2017 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 RG43_RS25485 8eb8a531f4114f63cd42e84dd39b2cf4 609 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 609 41.615 T 09-03-2017 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 RG43_RS25485 8eb8a531f4114f63cd42e84dd39b2cf4 609 SUPERFAMILY SSF56235 2 232 1.03E-75 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal RG43_RS25485 8eb8a531f4114f63cd42e84dd39b2cf4 609 Gene3D G3DSA:3.60.20.10 2 238 8.5E-81 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal RG43_RS25485 8eb8a531f4114f63cd42e84dd39b2cf4 609 Gene3D G3DSA:3.40.50.10490 445 609 3.0E-70 T 09-03-2017 RG43_RS25485 8eb8a531f4114f63cd42e84dd39b2cf4 609 SUPERFAMILY SSF53697 245 609 1.16E-114 T 09-03-2017 RG43_RS25485 8eb8a531f4114f63cd42e84dd39b2cf4 609 Pfam PF01380 SIS domain 462 591 1.5E-30 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 RG43_RS25485 8eb8a531f4114f63cd42e84dd39b2cf4 609 Pfam PF01380 SIS domain 289 418 2.7E-34 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 RG43_RS25485 8eb8a531f4114f63cd42e84dd39b2cf4 609 Pfam PF13522 Glutamine amidotransferase domain 65 182 6.1E-22 T 09-03-2017 RG43_RS25485 8eb8a531f4114f63cd42e84dd39b2cf4 609 Gene3D G3DSA:3.40.50.10490 245 444 1.7E-65 T 09-03-2017 RG43_RS00655 4173f52e6b4faf6a1f19092230de78b4 514 Pfam PF01676 Metalloenzyme superfamily 6 500 1.9E-84 T 09-03-2017 IPR006124 Metalloenzyme GO:0003824|GO:0046872 RG43_RS00655 4173f52e6b4faf6a1f19092230de78b4 514 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 86 299 2.7E-83 T 09-03-2017 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RG43_RS00655 4173f52e6b4faf6a1f19092230de78b4 514 Gene3D G3DSA:3.40.720.10 5 79 8.1E-89 T 09-03-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RG43_RS00655 4173f52e6b4faf6a1f19092230de78b4 514 Gene3D G3DSA:3.40.720.10 315 510 8.1E-89 T 09-03-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RG43_RS00655 4173f52e6b4faf6a1f19092230de78b4 514 PIRSF PIRSF001492 1 514 3.5E-206 T 09-03-2017 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RG43_RS00655 4173f52e6b4faf6a1f19092230de78b4 514 Gene3D G3DSA:3.40.1450.10 80 310 8.8E-99 T 09-03-2017 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RG43_RS00655 4173f52e6b4faf6a1f19092230de78b4 514 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 6 512 49.882 T 09-03-2017 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RG43_RS00655 4173f52e6b4faf6a1f19092230de78b4 514 SUPERFAMILY SSF64158 79 310 1.09E-85 T 09-03-2017 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RG43_RS00655 4173f52e6b4faf6a1f19092230de78b4 514 SUPERFAMILY SSF53649 311 510 1.83E-74 T 09-03-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RG43_RS00655 4173f52e6b4faf6a1f19092230de78b4 514 SUPERFAMILY SSF53649 5 79 1.83E-74 T 09-03-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RG43_RS00655 4173f52e6b4faf6a1f19092230de78b4 514 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 6 511 1.4E-246 T 09-03-2017 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RG43_RS07220 d9d09c0c7cf62a88547f035410b64ba3 490 SUPERFAMILY SSF52540 137 167 6.51E-61 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS07220 d9d09c0c7cf62a88547f035410b64ba3 490 SUPERFAMILY SSF52540 200 464 6.51E-61 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS07220 d9d09c0c7cf62a88547f035410b64ba3 490 Hamap MF_00195 GTPase Der [der]. 2 461 39.893 T 09-03-2017 IPR016484 GTP-binding protein EngA GO:0005525 RG43_RS07220 d9d09c0c7cf62a88547f035410b64ba3 490 Gene3D G3DSA:3.40.50.300 201 383 7.5E-55 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS07220 d9d09c0c7cf62a88547f035410b64ba3 490 Gene3D G3DSA:3.40.50.300 3 159 2.3E-47 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS07220 d9d09c0c7cf62a88547f035410b64ba3 490 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 458 3.8E-180 T 09-03-2017 IPR016484 GTP-binding protein EngA GO:0005525 RG43_RS07220 d9d09c0c7cf62a88547f035410b64ba3 490 Gene3D G3DSA:3.30.300.20 384 459 4.3E-24 T 09-03-2017 IPR015946 K homology domain-like, alpha/beta RG43_RS07220 d9d09c0c7cf62a88547f035410b64ba3 490 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 9.1E-10 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 RG43_RS07220 d9d09c0c7cf62a88547f035410b64ba3 490 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 9.1E-10 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 RG43_RS07220 d9d09c0c7cf62a88547f035410b64ba3 490 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 157 1.5E-21 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 RG43_RS07220 d9d09c0c7cf62a88547f035410b64ba3 490 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 203 368 3.3E-24 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 RG43_RS07220 d9d09c0c7cf62a88547f035410b64ba3 490 SUPERFAMILY SSF52540 4 168 9.85E-47 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS07220 d9d09c0c7cf62a88547f035410b64ba3 490 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 378 458 6.1E-27 T 09-03-2017 IPR032859 GTPase Der, C-terminal KH-domain-like RG43_RS07220 d9d09c0c7cf62a88547f035410b64ba3 490 PIRSF PIRSF006485 1 466 4.6E-180 T 09-03-2017 IPR016484 GTP-binding protein EngA GO:0005525 RG43_RS07220 d9d09c0c7cf62a88547f035410b64ba3 490 Pfam PF01926 50S ribosome-binding GTPase 205 322 8.4E-25 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 RG43_RS07220 d9d09c0c7cf62a88547f035410b64ba3 490 Pfam PF01926 50S ribosome-binding GTPase 5 119 6.4E-29 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 RG43_RS06075 c94f48911ff66332f52bc43b4774ded8 307 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 14 289 16.729 T 09-03-2017 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 RG43_RS06075 c94f48911ff66332f52bc43b4774ded8 307 TIGRFAM TIGR03638 cas1_ECOLI: CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI 8 272 7.4E-115 T 09-03-2017 IPR019851 CRISPR-associated protein Cas1, ECOLI subtype GO:0004520|GO:0043571|GO:0046872 RG43_RS06075 c94f48911ff66332f52bc43b4774ded8 307 Pfam PF01867 CRISPR associated protein Cas1 132 231 2.1E-9 T 09-03-2017 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 RG43_RS06075 c94f48911ff66332f52bc43b4774ded8 307 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 16 127 1.7E-21 T 09-03-2017 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 RG43_RS06075 c94f48911ff66332f52bc43b4774ded8 307 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 133 239 3.0E-30 T 09-03-2017 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 RG43_RS02355 4c31ca787dff2e8979a12d5731b91705 209 Gene3D G3DSA:2.40.30.10 158 207 8.6E-9 T 09-03-2017 RG43_RS02355 4c31ca787dff2e8979a12d5731b91705 209 Gene3D G3DSA:2.40.30.10 3 32 8.6E-9 T 09-03-2017 RG43_RS02355 4c31ca787dff2e8979a12d5731b91705 209 Pfam PF00297 Ribosomal protein L3 27 182 1.0E-14 T 09-03-2017 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS02355 4c31ca787dff2e8979a12d5731b91705 209 Gene3D G3DSA:4.10.960.10 77 157 2.8E-35 T 09-03-2017 RG43_RS02355 4c31ca787dff2e8979a12d5731b91705 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 2.2E-92 T 09-03-2017 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS02355 4c31ca787dff2e8979a12d5731b91705 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 40.756 T 09-03-2017 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS02355 4c31ca787dff2e8979a12d5731b91705 209 SUPERFAMILY SSF50447 1 208 8.65E-81 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain RG43_RS02355 4c31ca787dff2e8979a12d5731b91705 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 09-03-2017 IPR019926 Ribosomal protein L3, conserved site RG43_RS02260 726f96f31ac40517eb5337b3f01d59eb 704 Gene3D G3DSA:3.40.50.300 7 293 3.2E-104 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS02260 726f96f31ac40517eb5337b3f01d59eb 704 Gene3D G3DSA:3.30.70.240 610 696 3.0E-32 T 09-03-2017 IPR000640 Translation elongation factor EFG, V domain RG43_RS02260 726f96f31ac40517eb5337b3f01d59eb 704 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 3.7E-68 T 09-03-2017 RG43_RS02260 726f96f31ac40517eb5337b3f01d59eb 704 Hamap MF_00054_B Elongation factor G [fusA]. 6 702 112.408 T 09-03-2017 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RG43_RS02260 726f96f31ac40517eb5337b3f01d59eb 704 SMART SM00889 487 609 1.4E-72 T 09-03-2017 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 RG43_RS02260 726f96f31ac40517eb5337b3f01d59eb 704 Pfam PF14492 Elongation Factor G, domain II 411 485 7.8E-34 T 09-03-2017 IPR009022 Elongation factor G, III-V domain RG43_RS02260 726f96f31ac40517eb5337b3f01d59eb 704 Gene3D G3DSA:2.40.30.10 312 412 6.1E-38 T 09-03-2017 RG43_RS02260 726f96f31ac40517eb5337b3f01d59eb 704 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 703 0.0 T 09-03-2017 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RG43_RS02260 726f96f31ac40517eb5337b3f01d59eb 704 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 187 7.0E-32 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 RG43_RS02260 726f96f31ac40517eb5337b3f01d59eb 704 SMART SM00838 611 698 3.9E-50 T 09-03-2017 IPR000640 Translation elongation factor EFG, V domain RG43_RS02260 726f96f31ac40517eb5337b3f01d59eb 704 Gene3D G3DSA:3.30.230.10 491 609 9.4E-47 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RG43_RS02260 726f96f31ac40517eb5337b3f01d59eb 704 SUPERFAMILY SSF54211 486 610 9.1E-41 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold RG43_RS02260 726f96f31ac40517eb5337b3f01d59eb 704 SUPERFAMILY SSF50447 271 411 3.76E-35 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain RG43_RS02260 726f96f31ac40517eb5337b3f01d59eb 704 SUPERFAMILY SSF54980 411 488 3.02E-25 T 09-03-2017 IPR009022 Elongation factor G, III-V domain RG43_RS02260 726f96f31ac40517eb5337b3f01d59eb 704 Gene3D G3DSA:3.30.70.870 413 487 7.9E-39 T 09-03-2017 RG43_RS02260 726f96f31ac40517eb5337b3f01d59eb 704 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 09-03-2017 IPR031157 Tr-type G domain, conserved site RG43_RS02260 726f96f31ac40517eb5337b3f01d59eb 704 Pfam PF03144 Elongation factor Tu domain 2 331 398 5.1E-16 T 09-03-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 RG43_RS02260 726f96f31ac40517eb5337b3f01d59eb 704 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.7E-16 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RG43_RS02260 726f96f31ac40517eb5337b3f01d59eb 704 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.7E-16 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RG43_RS02260 726f96f31ac40517eb5337b3f01d59eb 704 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.7E-16 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RG43_RS02260 726f96f31ac40517eb5337b3f01d59eb 704 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.7E-16 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RG43_RS02260 726f96f31ac40517eb5337b3f01d59eb 704 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-16 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RG43_RS02260 726f96f31ac40517eb5337b3f01d59eb 704 Pfam PF00679 Elongation factor G C-terminus 611 696 6.7E-29 T 09-03-2017 IPR000640 Translation elongation factor EFG, V domain RG43_RS02260 726f96f31ac40517eb5337b3f01d59eb 704 Pfam PF03764 Elongation factor G, domain IV 486 609 1.9E-45 T 09-03-2017 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 RG43_RS02260 726f96f31ac40517eb5337b3f01d59eb 704 SUPERFAMILY SSF52540 6 288 4.46E-107 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS02260 726f96f31ac40517eb5337b3f01d59eb 704 SUPERFAMILY SSF54980 611 700 2.84E-27 T 09-03-2017 IPR009022 Elongation factor G, III-V domain RG43_RS02310 2abb1d0dc481465ada0eda1468a18749 125 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS02310 2abb1d0dc481465ada0eda1468a18749 125 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 1.3E-5 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS02310 2abb1d0dc481465ada0eda1468a18749 125 Gene3D G3DSA:3.30.1300.30 33 110 9.0E-16 T 09-03-2017 RG43_RS02310 2abb1d0dc481465ada0eda1468a18749 125 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 1 26 2.4E-7 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS02310 2abb1d0dc481465ada0eda1468a18749 125 SUPERFAMILY SSF54523 38 110 1.1E-12 T 09-03-2017 RG43_RS02310 2abb1d0dc481465ada0eda1468a18749 125 Pfam PF02501 Type II secretion system (T2SS), protein I 40 114 1.9E-13 T 09-03-2017 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 RG43_RS02310 2abb1d0dc481465ada0eda1468a18749 125 TIGRFAM TIGR01707 gspI: type II secretion system protein I 6 103 2.4E-39 T 09-03-2017 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 RG43_RS14410 af13e9f3b7209a88b110d3da50d6671d 512 Gene3D G3DSA:1.10.3650.10 360 435 3.5E-33 T 09-03-2017 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 RG43_RS14410 af13e9f3b7209a88b110d3da50d6671d 512 SUPERFAMILY SSF54862 1 504 1.26E-188 T 09-03-2017 RG43_RS14410 af13e9f3b7209a88b110d3da50d6671d 512 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 493 0.0 T 09-03-2017 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 RG43_RS14410 af13e9f3b7209a88b110d3da50d6671d 512 Pfam PF13247 4Fe-4S dicluster domain 176 272 9.7E-38 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS14410 af13e9f3b7209a88b110d3da50d6671d 512 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 359 437 3.8E-31 T 09-03-2017 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 RG43_RS14410 af13e9f3b7209a88b110d3da50d6671d 512 Gene3D G3DSA:3.30.70.20 237 359 3.8E-77 T 09-03-2017 RG43_RS14410 af13e9f3b7209a88b110d3da50d6671d 512 Gene3D G3DSA:3.30.70.20 437 466 3.8E-77 T 09-03-2017 RG43_RS14410 af13e9f3b7209a88b110d3da50d6671d 512 Gene3D G3DSA:3.30.70.20 195 236 2.6E-25 T 09-03-2017 RG43_RS14410 af13e9f3b7209a88b110d3da50d6671d 512 Gene3D G3DSA:3.30.70.20 174 194 1.1E-17 T 09-03-2017 RG43_RS14410 af13e9f3b7209a88b110d3da50d6671d 512 Gene3D G3DSA:3.30.70.20 5 53 1.1E-17 T 09-03-2017 RG43_RS22370 5e17a86516a0e922489aad67242b433d 447 Pfam PF03471 Transporter associated domain 347 425 2.2E-22 T 09-03-2017 IPR005170 Transporter-associated domain RG43_RS22370 5e17a86516a0e922489aad67242b433d 447 Pfam PF00571 CBS domain 284 333 0.0024 T 09-03-2017 IPR000644 CBS domain RG43_RS22370 5e17a86516a0e922489aad67242b433d 447 SMART SM01091 346 426 4.6E-30 T 09-03-2017 IPR005170 Transporter-associated domain RG43_RS22370 5e17a86516a0e922489aad67242b433d 447 SUPERFAMILY SSF56176 344 428 4.91E-24 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RG43_RS22370 5e17a86516a0e922489aad67242b433d 447 SUPERFAMILY SSF54631 200 335 1.89E-22 T 09-03-2017 RG43_RS22370 5e17a86516a0e922489aad67242b433d 447 Pfam PF01595 Domain of unknown function DUF21 7 197 3.0E-38 T 09-03-2017 IPR002550 Domain of unknown function DUF21 RG43_RS22370 5e17a86516a0e922489aad67242b433d 447 Gene3D G3DSA:3.30.465.10 342 425 1.1E-28 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RG43_RS22370 5e17a86516a0e922489aad67242b433d 447 Gene3D G3DSA:3.10.580.10 198 334 1.2E-14 T 09-03-2017 RG43_RS07175 7e9cc9b4a6c448fdc7644be7627f53ce 1653 PIRSF PIRSF038980 1 1653 0.0 T 09-03-2017 IPR026284 Alpha-2-macroglobulin domain protein, bacteria RG43_RS07175 7e9cc9b4a6c448fdc7644be7627f53ce 1653 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 759 906 5.0E-12 T 09-03-2017 IPR011625 Alpha-2-macroglobulin, N-terminal 2 RG43_RS07175 7e9cc9b4a6c448fdc7644be7627f53ce 1653 Pfam PF01835 MG2 domain 388 479 2.1E-20 T 09-03-2017 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 RG43_RS07175 7e9cc9b4a6c448fdc7644be7627f53ce 1653 SMART SM01359 758 906 1.5E-33 T 09-03-2017 IPR011625 Alpha-2-macroglobulin, N-terminal 2 RG43_RS07175 7e9cc9b4a6c448fdc7644be7627f53ce 1653 SUPERFAMILY SSF48239 1177 1434 2.16E-43 T 09-03-2017 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RG43_RS07175 7e9cc9b4a6c448fdc7644be7627f53ce 1653 Gene3D G3DSA:1.50.10.20 1175 1434 1.3E-37 T 09-03-2017 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RG43_RS07175 7e9cc9b4a6c448fdc7644be7627f53ce 1653 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 289 381 7.2E-22 T 09-03-2017 IPR021868 Alpha-2-macroglobulin MG1 domain RG43_RS07175 7e9cc9b4a6c448fdc7644be7627f53ce 1653 SMART SM01360 968 1057 1.9E-20 T 09-03-2017 IPR001599 Alpha-2-macroglobulin GO:0004866 RG43_RS07175 7e9cc9b4a6c448fdc7644be7627f53ce 1653 Pfam PF00207 Alpha-2-macroglobulin family 977 1056 9.6E-8 T 09-03-2017 IPR001599 Alpha-2-macroglobulin GO:0004866 RG43_RS06120 29a22b22fb115a631fed44b7147e2596 159 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 09-03-2017 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 RG43_RS06120 29a22b22fb115a631fed44b7147e2596 159 Pfam PF02542 YgbB family 1 154 2.1E-66 T 09-03-2017 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 RG43_RS06120 29a22b22fb115a631fed44b7147e2596 159 SUPERFAMILY SSF69765 1 156 1.57E-66 T 09-03-2017 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 RG43_RS06120 29a22b22fb115a631fed44b7147e2596 159 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 156 4.6E-72 T 09-03-2017 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 RG43_RS06120 29a22b22fb115a631fed44b7147e2596 159 Gene3D G3DSA:3.30.1330.50 1 156 2.4E-73 T 09-03-2017 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 RG43_RS06120 29a22b22fb115a631fed44b7147e2596 159 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 36.829 T 09-03-2017 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 RG43_RS20675 dbc4a399570c1e33acb2b63b25755e6d 890 Pfam PF08335 GlnD PII-uridylyltransferase 193 331 1.9E-36 T 09-03-2017 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 RG43_RS20675 dbc4a399570c1e33acb2b63b25755e6d 890 Gene3D G3DSA:1.10.3210.10 438 630 2.4E-28 T 09-03-2017 IPR006674 HD domain RG43_RS20675 dbc4a399570c1e33acb2b63b25755e6d 890 PIRSF PIRSF006288 26 889 0.0 T 09-03-2017 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 RG43_RS20675 dbc4a399570c1e33acb2b63b25755e6d 890 Pfam PF01909 Nucleotidyltransferase domain 86 137 9.7E-7 T 09-03-2017 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 RG43_RS20675 dbc4a399570c1e33acb2b63b25755e6d 890 Gene3D G3DSA:3.30.70.260 708 769 4.1E-4 T 09-03-2017 RG43_RS20675 dbc4a399570c1e33acb2b63b25755e6d 890 Gene3D G3DSA:3.30.70.260 816 867 1.1E-7 T 09-03-2017 RG43_RS20675 dbc4a399570c1e33acb2b63b25755e6d 890 SMART SM00471 464 611 3.1E-12 T 09-03-2017 IPR003607 HD/PDEase domain RG43_RS20675 dbc4a399570c1e33acb2b63b25755e6d 890 SUPERFAMILY SSF81593 213 328 1.18E-9 T 09-03-2017 RG43_RS20675 dbc4a399570c1e33acb2b63b25755e6d 890 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 890 349.976 T 09-03-2017 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 RG43_RS20675 dbc4a399570c1e33acb2b63b25755e6d 890 Pfam PF01842 ACT domain 817 874 1.2E-8 T 09-03-2017 IPR002912 ACT domain GO:0008152|GO:0016597 RG43_RS20675 dbc4a399570c1e33acb2b63b25755e6d 890 Pfam PF01842 ACT domain 709 758 4.7E-7 T 09-03-2017 IPR002912 ACT domain GO:0008152|GO:0016597 RG43_RS20675 dbc4a399570c1e33acb2b63b25755e6d 890 SUPERFAMILY SSF81301 20 189 1.64E-21 T 09-03-2017 RG43_RS20675 dbc4a399570c1e33acb2b63b25755e6d 890 Pfam PF01966 HD domain 468 601 1.4E-14 T 09-03-2017 IPR006674 HD domain RG43_RS20675 dbc4a399570c1e33acb2b63b25755e6d 890 SUPERFAMILY SSF109604 446 628 8.0E-13 T 09-03-2017 RG43_RS20675 dbc4a399570c1e33acb2b63b25755e6d 890 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 51 884 3.4E-303 T 09-03-2017 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 RG43_RS20675 dbc4a399570c1e33acb2b63b25755e6d 890 SUPERFAMILY SSF55021 705 761 5.83E-9 T 09-03-2017 RG43_RS20675 dbc4a399570c1e33acb2b63b25755e6d 890 Gene3D G3DSA:3.30.460.10 87 181 4.3E-7 T 09-03-2017 RG43_RS20675 dbc4a399570c1e33acb2b63b25755e6d 890 SUPERFAMILY SSF55021 815 874 4.2E-9 T 09-03-2017 RG43_RS09525 d0dc01b8efd3a55b10c8dd38bb166cd2 527 Pfam PF00571 CBS domain 373 422 9.7E-6 T 09-03-2017 IPR000644 CBS domain RG43_RS09525 d0dc01b8efd3a55b10c8dd38bb166cd2 527 Pfam PF00571 CBS domain 302 358 8.3E-5 T 09-03-2017 IPR000644 CBS domain RG43_RS09525 d0dc01b8efd3a55b10c8dd38bb166cd2 527 SMART SM00116 311 361 4.0 T 09-03-2017 IPR000644 CBS domain RG43_RS09525 d0dc01b8efd3a55b10c8dd38bb166cd2 527 SMART SM00116 374 422 4.9 T 09-03-2017 IPR000644 CBS domain RG43_RS09525 d0dc01b8efd3a55b10c8dd38bb166cd2 527 Pfam PF03471 Transporter associated domain 440 516 2.4E-19 T 09-03-2017 IPR005170 Transporter-associated domain RG43_RS09525 d0dc01b8efd3a55b10c8dd38bb166cd2 527 Gene3D G3DSA:3.30.465.10 417 516 2.6E-26 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RG43_RS09525 d0dc01b8efd3a55b10c8dd38bb166cd2 527 SUPERFAMILY SSF54631 290 424 5.25E-26 T 09-03-2017 RG43_RS09525 d0dc01b8efd3a55b10c8dd38bb166cd2 527 SMART SM01091 439 518 3.0E-25 T 09-03-2017 IPR005170 Transporter-associated domain RG43_RS09525 d0dc01b8efd3a55b10c8dd38bb166cd2 527 Gene3D G3DSA:3.10.580.10 288 416 2.7E-14 T 09-03-2017 RG43_RS09525 d0dc01b8efd3a55b10c8dd38bb166cd2 527 Pfam PF03741 Integral membrane protein TerC family 14 203 2.2E-50 T 09-03-2017 IPR005496 Integral membrane protein TerC GO:0016021 RG43_RS09525 d0dc01b8efd3a55b10c8dd38bb166cd2 527 SUPERFAMILY SSF56176 437 521 1.58E-21 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RG43_RS22970 27c0ba0f8d7654c159105fcacaf3f512 209 Pfam PF09997 Predicted membrane protein (DUF2238) 42 182 2.9E-56 T 09-03-2017 IPR014509 Uncharacterised conserved protein UCP020606 RG43_RS22970 27c0ba0f8d7654c159105fcacaf3f512 209 PIRSF PIRSF020606 1 204 7.9E-82 T 09-03-2017 IPR014509 Uncharacterised conserved protein UCP020606 RG43_RS21450 fb4da09f65b6c5940f6e07713a8e2d6f 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 3.0E-36 T 09-03-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS21450 fb4da09f65b6c5940f6e07713a8e2d6f 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 87 1.2E-34 T 09-03-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS21450 fb4da09f65b6c5940f6e07713a8e2d6f 87 Gene3D G3DSA:1.20.58.110 3 87 2.4E-32 T 09-03-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS21450 fb4da09f65b6c5940f6e07713a8e2d6f 87 Pfam PF01649 Ribosomal protein S20 2 84 2.4E-28 T 09-03-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS21450 fb4da09f65b6c5940f6e07713a8e2d6f 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.208 T 09-03-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS21450 fb4da09f65b6c5940f6e07713a8e2d6f 87 SUPERFAMILY SSF46992 3 86 1.57E-31 T 09-03-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS01815 486aef97aa4a6c148ded26d938ed6c26 276 Gene3D G3DSA:1.20.1540.10 94 267 5.6E-39 T 09-03-2017 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 RG43_RS01815 486aef97aa4a6c148ded26d938ed6c26 276 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 82 7.1E-29 T 09-03-2017 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 RG43_RS01815 486aef97aa4a6c148ded26d938ed6c26 276 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 4 269 1.5E-116 T 09-03-2017 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 RG43_RS01815 486aef97aa4a6c148ded26d938ed6c26 276 SUPERFAMILY SSF144091 92 267 3.53E-45 T 09-03-2017 RG43_RS01815 486aef97aa4a6c148ded26d938ed6c26 276 Pfam PF01694 Rhomboid family 131 269 5.1E-29 T 09-03-2017 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 RG43_RS01815 486aef97aa4a6c148ded26d938ed6c26 276 Hamap MF_01594 Rhomboid protease GlpG [glpG]. 1 276 49.499 T 09-03-2017 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 RG43_RS00980 73fda5c9064dcaf9e2ab74e80353758c 219 PRINTS PR01021 OMPA domain signature 146 161 6.5E-13 T 09-03-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RG43_RS00980 73fda5c9064dcaf9e2ab74e80353758c 219 PRINTS PR01021 OMPA domain signature 116 138 6.5E-13 T 09-03-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RG43_RS00980 73fda5c9064dcaf9e2ab74e80353758c 219 PRINTS PR01021 OMPA domain signature 161 177 6.5E-13 T 09-03-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RG43_RS00980 73fda5c9064dcaf9e2ab74e80353758c 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 132 158 1.4E-7 T 09-03-2017 RG43_RS00980 73fda5c9064dcaf9e2ab74e80353758c 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 161 178 1.4E-7 T 09-03-2017 RG43_RS00980 73fda5c9064dcaf9e2ab74e80353758c 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 199 219 1.4E-7 T 09-03-2017 RG43_RS00980 73fda5c9064dcaf9e2ab74e80353758c 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 179 198 1.4E-7 T 09-03-2017 RG43_RS00980 73fda5c9064dcaf9e2ab74e80353758c 219 ProSitePatterns PS01068 OmpA-like domain. 148 192 - T 09-03-2017 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 RG43_RS00980 73fda5c9064dcaf9e2ab74e80353758c 219 Pfam PF00691 OmpA family 115 210 1.0E-22 T 09-03-2017 IPR006665 OmpA-like domain RG43_RS00980 73fda5c9064dcaf9e2ab74e80353758c 219 SUPERFAMILY SSF103088 103 218 3.92E-38 T 09-03-2017 IPR006665 OmpA-like domain RG43_RS00980 73fda5c9064dcaf9e2ab74e80353758c 219 Pfam PF13488 Glycine zipper 37 85 2.4E-12 T 09-03-2017 RG43_RS00980 73fda5c9064dcaf9e2ab74e80353758c 219 Gene3D G3DSA:3.30.1330.60 103 216 6.4E-40 T 09-03-2017 IPR006665 OmpA-like domain RG43_RS08050 08a38d2ac2923f822f5442519f24796a 446 SUPERFAMILY SSF56935 26 446 8.24E-115 T 09-03-2017 RG43_RS08050 08a38d2ac2923f822f5442519f24796a 446 Gene3D G3DSA:2.40.160.60 26 446 2.5E-141 T 09-03-2017 RG43_RS08050 08a38d2ac2923f822f5442519f24796a 446 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 17 446 6.2E-156 T 09-03-2017 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) RG43_RS04160 24a9aa1c72fb1d655cc86e0fe57f027c 85 Pfam PF04728 Lipoprotein leucine-zipper 25 71 1.1E-12 T 09-03-2017 IPR006817 Lipoprotein leucine-zipper GO:0019867 RG43_RS04160 24a9aa1c72fb1d655cc86e0fe57f027c 85 Gene3D G3DSA:1.20.5.190 24 69 4.8E-7 T 09-03-2017 RG43_RS04160 24a9aa1c72fb1d655cc86e0fe57f027c 85 SUPERFAMILY SSF58042 24 72 4.32E-18 T 09-03-2017 RG43_RS04160 24a9aa1c72fb1d655cc86e0fe57f027c 85 PIRSF PIRSF002855 1 82 3.4E-25 T 09-03-2017 IPR016367 Murein-lipoprotein RG43_RS26535 24a9aa1c72fb1d655cc86e0fe57f027c 85 Pfam PF04728 Lipoprotein leucine-zipper 25 71 1.1E-12 T 09-03-2017 IPR006817 Lipoprotein leucine-zipper GO:0019867 RG43_RS26535 24a9aa1c72fb1d655cc86e0fe57f027c 85 Gene3D G3DSA:1.20.5.190 24 69 4.8E-7 T 09-03-2017 RG43_RS26535 24a9aa1c72fb1d655cc86e0fe57f027c 85 SUPERFAMILY SSF58042 24 72 4.32E-18 T 09-03-2017 RG43_RS26535 24a9aa1c72fb1d655cc86e0fe57f027c 85 PIRSF PIRSF002855 1 82 3.4E-25 T 09-03-2017 IPR016367 Murein-lipoprotein RG43_RS21270 3c717ad396a7379cb5b870f1b449d8da 219 Pfam PF00849 RNA pseudouridylate synthase 22 169 5.4E-30 T 09-03-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RG43_RS21270 3c717ad396a7379cb5b870f1b449d8da 219 SUPERFAMILY SSF55120 8 216 1.92E-63 T 09-03-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RG43_RS21270 3c717ad396a7379cb5b870f1b449d8da 219 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 60 74 - T 09-03-2017 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 RG43_RS21270 3c717ad396a7379cb5b870f1b449d8da 219 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 7 218 1.0E-60 T 09-03-2017 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 RG43_RS09905 c72b609bd9c19ba60ba45d7b37bb0d52 301 Pfam PF13990 YjcZ-like protein 26 296 1.9E-71 T 09-03-2017 IPR025599 YjcZ-like protein RG43_RS20275 c72b609bd9c19ba60ba45d7b37bb0d52 301 Pfam PF13990 YjcZ-like protein 26 296 1.9E-71 T 09-03-2017 IPR025599 YjcZ-like protein RG43_RS02975 647b05bc5b1a37ab9e36f63b4fa8d9e7 328 Gene3D G3DSA:3.10.580.10 201 325 6.7E-39 T 09-03-2017 RG43_RS02975 647b05bc5b1a37ab9e36f63b4fa8d9e7 328 SUPERFAMILY SSF53697 14 325 8.01E-68 T 09-03-2017 RG43_RS02975 647b05bc5b1a37ab9e36f63b4fa8d9e7 328 PIRSF PIRSF004692 1 328 7.8E-136 T 09-03-2017 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 RG43_RS02975 647b05bc5b1a37ab9e36f63b4fa8d9e7 328 Pfam PF01380 SIS domain 46 177 1.1E-35 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 RG43_RS02975 647b05bc5b1a37ab9e36f63b4fa8d9e7 328 Gene3D G3DSA:3.40.50.10490 17 200 6.6E-52 T 09-03-2017 RG43_RS02975 647b05bc5b1a37ab9e36f63b4fa8d9e7 328 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 50 318 6.3E-135 T 09-03-2017 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 RG43_RS02975 647b05bc5b1a37ab9e36f63b4fa8d9e7 328 Pfam PF00571 CBS domain 206 261 6.2E-5 T 09-03-2017 IPR000644 CBS domain RG43_RS02975 647b05bc5b1a37ab9e36f63b4fa8d9e7 328 Pfam PF00571 CBS domain 274 325 1.9E-5 T 09-03-2017 IPR000644 CBS domain RG43_RS25540 fbb22390c63ce03aef98b764565794b3 624 SUPERFAMILY SSF55604 4 77 1.96E-20 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RG43_RS25540 fbb22390c63ce03aef98b764565794b3 624 Gene3D G3DSA:2.70.70.10 477 623 4.5E-56 T 09-03-2017 RG43_RS25540 fbb22390c63ce03aef98b764565794b3 624 SUPERFAMILY SSF51261 475 622 1.17E-48 T 09-03-2017 IPR011055 Duplicated hybrid motif RG43_RS25540 fbb22390c63ce03aef98b764565794b3 624 Pfam PF00367 phosphotransferase system, EIIB 7 38 9.6E-15 T 09-03-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 RG43_RS25540 fbb22390c63ce03aef98b764565794b3 624 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 478 601 2.8E-46 T 09-03-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 RG43_RS25540 fbb22390c63ce03aef98b764565794b3 624 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 148 433 2.8E-88 T 09-03-2017 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 RG43_RS25540 fbb22390c63ce03aef98b764565794b3 624 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 3 622 2.2E-213 T 09-03-2017 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 RG43_RS25540 fbb22390c63ce03aef98b764565794b3 624 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 478 598 1.5E-44 T 09-03-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 RG43_RS25540 fbb22390c63ce03aef98b764565794b3 624 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 540 552 - T 09-03-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 RG43_RS25540 fbb22390c63ce03aef98b764565794b3 624 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 17 34 - T 09-03-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 RG43_RS25540 fbb22390c63ce03aef98b764565794b3 624 Gene3D G3DSA:3.30.1360.60 2 79 4.4E-27 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RG43_RS25540 fbb22390c63ce03aef98b764565794b3 624 Pfam PF02378 Phosphotransferase system, EIIC 106 389 2.7E-29 T 09-03-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 RG43_RS25540 fbb22390c63ce03aef98b764565794b3 624 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 26 106 9.6E-15 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RG43_RS10185 373e38e2ad42774077bf6ea3223f7671 2035 ProSitePatterns PS00455 Putative AMP-binding domain signature. 709 720 - T 09-03-2017 IPR020845 AMP-binding, conserved site RG43_RS10185 373e38e2ad42774077bf6ea3223f7671 2035 ProSitePatterns PS00012 Phosphopantetheine attachment site. 47 62 - T 09-03-2017 IPR006162 Phosphopantetheine attachment site RG43_RS10185 373e38e2ad42774077bf6ea3223f7671 2035 SUPERFAMILY SSF52777 298 536 1.45E-36 T 09-03-2017 RG43_RS10185 373e38e2ad42774077bf6ea3223f7671 2035 Pfam PF08415 Nonribosomal peptide synthase 431 486 3.2E-17 T 09-03-2017 IPR013624 Non-ribosomal peptide synthetase RG43_RS10185 373e38e2ad42774077bf6ea3223f7671 2035 Pfam PF08415 Nonribosomal peptide synthase 1802 1858 6.0E-17 T 09-03-2017 IPR013624 Non-ribosomal peptide synthetase RG43_RS10185 373e38e2ad42774077bf6ea3223f7671 2035 SUPERFAMILY SSF53335 1164 1326 3.73E-18 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS10185 373e38e2ad42774077bf6ea3223f7671 2035 Gene3D G3DSA:1.10.1200.10 1414 1476 1.5E-21 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain RG43_RS10185 373e38e2ad42774077bf6ea3223f7671 2035 Gene3D G3DSA:1.10.1200.10 1938 2015 4.2E-12 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain RG43_RS10185 373e38e2ad42774077bf6ea3223f7671 2035 Gene3D G3DSA:1.10.1200.10 22 92 1.4E-7 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain RG43_RS10185 373e38e2ad42774077bf6ea3223f7671 2035 SUPERFAMILY SSF47336 21 124 3.89E-9 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain RG43_RS10185 373e38e2ad42774077bf6ea3223f7671 2035 SUPERFAMILY SSF47336 1946 2014 1.87E-9 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain RG43_RS10185 373e38e2ad42774077bf6ea3223f7671 2035 SUPERFAMILY SSF47336 1405 1475 2.02E-15 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain RG43_RS10185 373e38e2ad42774077bf6ea3223f7671 2035 SMART SM00823 Phosphopantetheine attachment site 1949 2017 0.0012 T 09-03-2017 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 RG43_RS10185 373e38e2ad42774077bf6ea3223f7671 2035 SMART SM00823 Phosphopantetheine attachment site 1407 1478 0.06 T 09-03-2017 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 RG43_RS10185 373e38e2ad42774077bf6ea3223f7671 2035 Pfam PF00550 Phosphopantetheine attachment site 1412 1473 6.0E-10 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain RG43_RS10185 373e38e2ad42774077bf6ea3223f7671 2035 Pfam PF00550 Phosphopantetheine attachment site 22 82 9.6E-7 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain RG43_RS10185 373e38e2ad42774077bf6ea3223f7671 2035 Pfam PF00550 Phosphopantetheine attachment site 1952 2013 4.1E-8 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain RG43_RS10185 373e38e2ad42774077bf6ea3223f7671 2035 SUPERFAMILY SSF52777 1669 1908 1.06E-40 T 09-03-2017 RG43_RS10185 373e38e2ad42774077bf6ea3223f7671 2035 Gene3D G3DSA:3.30.300.30 1349 1413 3.3E-30 T 09-03-2017 RG43_RS10185 373e38e2ad42774077bf6ea3223f7671 2035 Gene3D G3DSA:3.30.300.30 962 1014 3.3E-30 T 09-03-2017 RG43_RS10185 373e38e2ad42774077bf6ea3223f7671 2035 Gene3D G3DSA:3.40.50.150 1162 1322 5.6E-14 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS10185 373e38e2ad42774077bf6ea3223f7671 2035 Gene3D G3DSA:3.40.50.980 716 872 5.2E-42 T 09-03-2017 RG43_RS10185 373e38e2ad42774077bf6ea3223f7671 2035 Pfam PF00668 Condensation domain 112 409 7.7E-70 T 09-03-2017 IPR001242 Condensation domain RG43_RS10185 373e38e2ad42774077bf6ea3223f7671 2035 Pfam PF00668 Condensation domain 1495 1778 1.8E-35 T 09-03-2017 IPR001242 Condensation domain RG43_RS10185 373e38e2ad42774077bf6ea3223f7671 2035 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 594 990 1.7E-118 T 09-03-2017 IPR010071 Amino acid adenylation domain RG43_RS10185 373e38e2ad42774077bf6ea3223f7671 2035 SUPERFAMILY SSF56801 549 1018 8.24E-137 T 09-03-2017 RG43_RS10185 373e38e2ad42774077bf6ea3223f7671 2035 SUPERFAMILY SSF56801 1344 1422 8.24E-137 T 09-03-2017 RG43_RS10185 373e38e2ad42774077bf6ea3223f7671 2035 Gene3D G3DSA:2.30.38.10 880 956 1.8E-22 T 09-03-2017 RG43_RS10185 373e38e2ad42774077bf6ea3223f7671 2035 SUPERFAMILY SSF52777 1491 1680 1.56E-19 T 09-03-2017 RG43_RS10185 373e38e2ad42774077bf6ea3223f7671 2035 SUPERFAMILY SSF52777 117 289 1.56E-18 T 09-03-2017 RG43_RS10185 373e38e2ad42774077bf6ea3223f7671 2035 Gene3D G3DSA:3.40.50.980 568 715 2.5E-34 T 09-03-2017 RG43_RS10185 373e38e2ad42774077bf6ea3223f7671 2035 Pfam PF08242 Methyltransferase domain 1182 1279 3.3E-9 T 09-03-2017 IPR013217 Methyltransferase type 12 RG43_RS10185 373e38e2ad42774077bf6ea3223f7671 2035 Pfam PF00501 AMP-binding enzyme 575 965 6.9E-91 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RG43_RS18790 f6fe331eede1004b86965d42acd8bb28 90 SMART SM00411 1 90 7.6E-43 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 RG43_RS18790 f6fe331eede1004b86965d42acd8bb28 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 4.2E-33 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 RG43_RS18790 f6fe331eede1004b86965d42acd8bb28 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 09-03-2017 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 RG43_RS18790 f6fe331eede1004b86965d42acd8bb28 90 SUPERFAMILY SSF47729 1 90 4.27E-32 T 09-03-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RG43_RS18790 f6fe331eede1004b86965d42acd8bb28 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 7.0E-20 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 RG43_RS18790 f6fe331eede1004b86965d42acd8bb28 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 7.0E-20 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 RG43_RS18790 f6fe331eede1004b86965d42acd8bb28 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 7.0E-20 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 RG43_RS18790 f6fe331eede1004b86965d42acd8bb28 90 Gene3D G3DSA:4.10.520.10 1 90 1.2E-36 T 09-03-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RG43_RS13330 3fb984cf97dc44dd637a081518a51878 345 Gene3D G3DSA:3.90.180.10 4 142 7.9E-59 T 09-03-2017 IPR011032 GroES-like RG43_RS13330 3fb984cf97dc44dd637a081518a51878 345 SUPERFAMILY SSF50129 298 340 1.55E-5 T 09-03-2017 IPR011032 GroES-like RG43_RS13330 3fb984cf97dc44dd637a081518a51878 345 SMART SM00829 21 339 2.1E-5 T 09-03-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RG43_RS13330 3fb984cf97dc44dd637a081518a51878 345 SUPERFAMILY SSF51735 127 306 6.23E-44 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS13330 3fb984cf97dc44dd637a081518a51878 345 SUPERFAMILY SSF50129 7 146 3.07E-46 T 09-03-2017 IPR011032 GroES-like RG43_RS13330 3fb984cf97dc44dd637a081518a51878 345 Pfam PF00107 Zinc-binding dehydrogenase 161 298 8.7E-19 T 09-03-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RG43_RS13330 3fb984cf97dc44dd637a081518a51878 345 Pfam PF16884 N-terminal domain of oxidoreductase 9 115 9.4E-43 T 09-03-2017 RG43_RS13330 3fb984cf97dc44dd637a081518a51878 345 Gene3D G3DSA:3.40.50.720 143 309 7.1E-63 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS18740 2c10f8c51446d7159794c9595ed25026 112 PIRSF PIRSF039144 1 112 6.2E-53 T 09-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RG43_RS18740 2c10f8c51446d7159794c9595ed25026 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 09-03-2017 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 RG43_RS18740 2c10f8c51446d7159794c9595ed25026 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 09-03-2017 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 RG43_RS18740 2c10f8c51446d7159794c9595ed25026 112 SUPERFAMILY SSF54913 1 112 4.13E-42 T 09-03-2017 IPR011322 Nitrogen regulatory PII-like, alpha/beta RG43_RS18740 2c10f8c51446d7159794c9595ed25026 112 Gene3D G3DSA:3.30.70.120 1 112 1.3E-47 T 09-03-2017 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RG43_RS18740 2c10f8c51446d7159794c9595ed25026 112 SMART SM00938 4 105 6.4E-61 T 09-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RG43_RS18740 2c10f8c51446d7159794c9595ed25026 112 PRINTS PR00340 P-II protein signature 2 17 2.8E-41 T 09-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RG43_RS18740 2c10f8c51446d7159794c9595ed25026 112 PRINTS PR00340 P-II protein signature 83 103 2.8E-41 T 09-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RG43_RS18740 2c10f8c51446d7159794c9595ed25026 112 PRINTS PR00340 P-II protein signature 52 75 2.8E-41 T 09-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RG43_RS18740 2c10f8c51446d7159794c9595ed25026 112 PRINTS PR00340 P-II protein signature 23 41 2.8E-41 T 09-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RG43_RS18740 2c10f8c51446d7159794c9595ed25026 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 3.9E-41 T 09-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RG43_RS10690 8ddbf52dcdb3fae25c201bda719dd28c 245 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 47 243 6.8E-95 T 09-03-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 RG43_RS10690 8ddbf52dcdb3fae25c201bda719dd28c 245 Pfam PF00813 FliP family 48 239 1.6E-79 T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 RG43_RS10690 8ddbf52dcdb3fae25c201bda719dd28c 245 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 172 187 - T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 RG43_RS10690 8ddbf52dcdb3fae25c201bda719dd28c 245 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 220 232 - T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 RG43_RS10690 8ddbf52dcdb3fae25c201bda719dd28c 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 103 115 1.1E-33 T 09-03-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 RG43_RS10690 8ddbf52dcdb3fae25c201bda719dd28c 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 165 177 1.1E-33 T 09-03-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 RG43_RS10690 8ddbf52dcdb3fae25c201bda719dd28c 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 43 52 1.1E-33 T 09-03-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 RG43_RS10690 8ddbf52dcdb3fae25c201bda719dd28c 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 143 155 1.1E-33 T 09-03-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 RG43_RS10690 8ddbf52dcdb3fae25c201bda719dd28c 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 115 129 1.1E-33 T 09-03-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 RG43_RS10690 8ddbf52dcdb3fae25c201bda719dd28c 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 233 243 1.1E-33 T 09-03-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 RG43_RS10690 8ddbf52dcdb3fae25c201bda719dd28c 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 172 192 2.9E-68 T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 RG43_RS10690 8ddbf52dcdb3fae25c201bda719dd28c 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 64 84 2.9E-68 T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 RG43_RS10690 8ddbf52dcdb3fae25c201bda719dd28c 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 217 242 2.9E-68 T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 RG43_RS10690 8ddbf52dcdb3fae25c201bda719dd28c 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 45 64 2.9E-68 T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 RG43_RS10690 8ddbf52dcdb3fae25c201bda719dd28c 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 193 214 2.9E-68 T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 RG43_RS10690 8ddbf52dcdb3fae25c201bda719dd28c 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 84 103 2.9E-68 T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 RG43_RS04910 b1284b1947d0948ef760548490558850 350 SUPERFAMILY SSF55811 220 344 3.09E-28 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 RG43_RS04910 b1284b1947d0948ef760548490558850 350 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 5 277 1.7E-132 T 09-03-2017 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 RG43_RS04910 b1284b1947d0948ef760548490558850 350 Gene3D G3DSA:1.10.1670.10 123 224 3.3E-39 T 09-03-2017 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 RG43_RS04910 b1284b1947d0948ef760548490558850 350 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 192 208 2.4E-4 T 09-03-2017 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 RG43_RS04910 b1284b1947d0948ef760548490558850 350 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 192 208 - T 09-03-2017 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 RG43_RS04910 b1284b1947d0948ef760548490558850 350 Pfam PF00633 Helix-hairpin-helix motif 100 127 4.9E-8 T 09-03-2017 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 RG43_RS04910 b1284b1947d0948ef760548490558850 350 Gene3D G3DSA:3.90.79.10 229 345 4.7E-24 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 RG43_RS04910 b1284b1947d0948ef760548490558850 350 Gene3D G3DSA:1.10.340.30 22 122 1.9E-45 T 09-03-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 RG43_RS04910 b1284b1947d0948ef760548490558850 350 SMART SM00525 191 211 0.0039 T 09-03-2017 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 RG43_RS04910 b1284b1947d0948ef760548490558850 350 SUPERFAMILY SSF48150 3 225 1.88E-78 T 09-03-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 RG43_RS04910 b1284b1947d0948ef760548490558850 350 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 09-03-2017 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 RG43_RS04910 b1284b1947d0948ef760548490558850 350 SMART SM00478 39 190 7.5E-56 T 09-03-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 RG43_RS04910 b1284b1947d0948ef760548490558850 350 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 36 168 1.8E-23 T 09-03-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 RG43_RS04910 b1284b1947d0948ef760548490558850 350 Pfam PF14815 NUDIX domain 234 343 2.1E-23 T 09-03-2017 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 RG43_RS18695 44e440bb09de08f4df2a54e54e6ed7f1 183 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 138 166 - T 09-03-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 RG43_RS18695 44e440bb09de08f4df2a54e54e6ed7f1 183 SMART SM01266 5 59 2.4E-21 T 09-03-2017 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 RG43_RS18695 44e440bb09de08f4df2a54e54e6ed7f1 183 Gene3D G3DSA:2.160.10.10 2 183 1.3E-62 T 09-03-2017 RG43_RS18695 44e440bb09de08f4df2a54e54e6ed7f1 183 Pfam PF12464 Maltose acetyltransferase 7 57 3.1E-16 T 09-03-2017 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 RG43_RS18695 44e440bb09de08f4df2a54e54e6ed7f1 183 SUPERFAMILY SSF51161 2 182 3.47E-55 T 09-03-2017 IPR011004 Trimeric LpxA-like RG43_RS18695 44e440bb09de08f4df2a54e54e6ed7f1 183 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 129 164 4.3E-11 T 09-03-2017 IPR001451 Hexapeptide repeat RG43_RS18695 44e440bb09de08f4df2a54e54e6ed7f1 183 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 92 109 0.0041 T 09-03-2017 IPR001451 Hexapeptide repeat RG43_RS08655 264e24997204dbd0b3839e380534dcae 216 SMART SM00882 5 198 3.6E-65 T 09-03-2017 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RG43_RS08655 264e24997204dbd0b3839e380534dcae 216 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 43 51 - T 09-03-2017 IPR004164 Coenzyme A transferase active site GO:0008152|GO:0008410 RG43_RS08655 264e24997204dbd0b3839e380534dcae 216 Gene3D G3DSA:3.40.810.20 3 209 8.9E-84 T 09-03-2017 RG43_RS08655 264e24997204dbd0b3839e380534dcae 216 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 204 1.7E-92 T 09-03-2017 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 RG43_RS08655 264e24997204dbd0b3839e380534dcae 216 Pfam PF01144 Coenzyme A transferase 5 179 2.1E-37 T 09-03-2017 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RG43_RS08655 264e24997204dbd0b3839e380534dcae 216 SUPERFAMILY SSF100950 2 211 1.06E-67 T 09-03-2017 RG43_RS08935 d0f6208c7ec49867d6a18499e56be373 190 SMART SM01185 69 125 1.4E-13 T 09-03-2017 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 RG43_RS08935 d0f6208c7ec49867d6a18499e56be373 190 Gene3D G3DSA:2.40.50.140 132 189 1.1E-22 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS08935 d0f6208c7ec49867d6a18499e56be373 190 SUPERFAMILY SSF50249 67 130 2.27E-11 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS08935 d0f6208c7ec49867d6a18499e56be373 190 PIRSF PIRSF005901 1 190 1.4E-59 T 09-03-2017 IPR020599 Translation elongation factor P/YeiP RG43_RS08935 d0f6208c7ec49867d6a18499e56be373 190 Gene3D G3DSA:2.30.30.30 1 65 7.0E-16 T 09-03-2017 IPR014722 Ribosomal protein L2 domain 2 RG43_RS08935 d0f6208c7ec49867d6a18499e56be373 190 Pfam PF01132 Elongation factor P (EF-P) OB domain 72 124 1.7E-13 T 09-03-2017 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 RG43_RS08935 d0f6208c7ec49867d6a18499e56be373 190 SUPERFAMILY SSF50104 1 65 2.71E-11 T 09-03-2017 IPR008991 Translation protein SH3-like domain RG43_RS08935 d0f6208c7ec49867d6a18499e56be373 190 SUPERFAMILY SSF50249 132 189 6.68E-15 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS08935 d0f6208c7ec49867d6a18499e56be373 190 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 189 6.9E-103 T 09-03-2017 IPR011897 Translation elongation factor P-like, YeiP RG43_RS08935 d0f6208c7ec49867d6a18499e56be373 190 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 4 62 7.0E-17 T 09-03-2017 IPR013185 Translation elongation factor, KOW-like RG43_RS08935 d0f6208c7ec49867d6a18499e56be373 190 Pfam PF09285 Elongation factor P, C-terminal 133 188 1.4E-18 T 09-03-2017 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 RG43_RS08935 d0f6208c7ec49867d6a18499e56be373 190 SMART SM00841 133 188 1.7E-26 T 09-03-2017 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 RG43_RS08935 d0f6208c7ec49867d6a18499e56be373 190 Gene3D G3DSA:2.40.50.140 67 131 2.4E-14 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS08935 d0f6208c7ec49867d6a18499e56be373 190 ProSitePatterns PS01275 Elongation factor P signature. 154 173 - T 09-03-2017 IPR013852 Translation elongation factor P/YeiP, conserved site RG43_RS08935 d0f6208c7ec49867d6a18499e56be373 190 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 189 45.611 T 09-03-2017 IPR011897 Translation elongation factor P-like, YeiP RG43_RS06930 69965a3433cd0b8554c3c257d6ab2ab8 282 Gene3D G3DSA:3.40.50.10490 103 262 1.8E-31 T 09-03-2017 RG43_RS06930 69965a3433cd0b8554c3c257d6ab2ab8 282 Gene3D G3DSA:1.10.10.10 1 77 3.2E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS06930 69965a3433cd0b8554c3c257d6ab2ab8 282 SUPERFAMILY SSF53697 100 261 8.34E-31 T 09-03-2017 RG43_RS06930 69965a3433cd0b8554c3c257d6ab2ab8 282 Pfam PF01380 SIS domain 128 258 9.9E-32 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 RG43_RS06930 69965a3433cd0b8554c3c257d6ab2ab8 282 SUPERFAMILY SSF46689 1 77 3.4E-19 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS06930 69965a3433cd0b8554c3c257d6ab2ab8 282 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 2.3E-29 T 09-03-2017 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 RG43_RS04805 6e544ecbcffc51ed1b36d4a3a556b1d7 286 Pfam PF00665 Integrase core domain 125 240 1.6E-27 T 09-03-2017 IPR001584 Integrase, catalytic core GO:0015074 RG43_RS04805 6e544ecbcffc51ed1b36d4a3a556b1d7 286 Gene3D G3DSA:3.30.420.10 119 277 3.3E-28 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS04805 6e544ecbcffc51ed1b36d4a3a556b1d7 286 Pfam PF13276 HTH-like domain 49 102 8.3E-15 T 09-03-2017 IPR025948 HTH-like domain RG43_RS04805 6e544ecbcffc51ed1b36d4a3a556b1d7 286 SUPERFAMILY SSF53098 118 284 3.64E-34 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS20760 8d727fabcfbecefce0e72a4f6a479fd2 729 Gene3D G3DSA:2.40.170.20 196 729 2.8E-164 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RG43_RS20760 8d727fabcfbecefce0e72a4f6a479fd2 729 Gene3D G3DSA:2.170.130.10 32 192 4.5E-40 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RG43_RS20760 8d727fabcfbecefce0e72a4f6a479fd2 729 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 47 - T 09-03-2017 IPR010916 TonB box, conserved site RG43_RS20760 8d727fabcfbecefce0e72a4f6a479fd2 729 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 78 729 3.1E-173 T 09-03-2017 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 RG43_RS20760 8d727fabcfbecefce0e72a4f6a479fd2 729 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 712 729 - T 09-03-2017 IPR010917 TonB-dependent receptor, conserved site RG43_RS20760 8d727fabcfbecefce0e72a4f6a479fd2 729 Pfam PF07715 TonB-dependent Receptor Plug Domain 77 181 3.2E-23 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RG43_RS20760 8d727fabcfbecefce0e72a4f6a479fd2 729 Pfam PF00593 TonB dependent receptor 490 727 4.5E-27 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RG43_RS20760 8d727fabcfbecefce0e72a4f6a479fd2 729 SUPERFAMILY SSF56935 39 729 7.33E-142 T 09-03-2017 RG43_RS11800 197ed0ae48a62745580c28034cde75da 347 SUPERFAMILY SSF56042 164 340 1.14E-50 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain RG43_RS11800 197ed0ae48a62745580c28034cde75da 347 SUPERFAMILY SSF55326 7 161 5.38E-41 T 09-03-2017 RG43_RS11800 197ed0ae48a62745580c28034cde75da 347 Pfam PF02769 AIR synthase related protein, C-terminal domain 169 344 1.8E-32 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain RG43_RS11800 197ed0ae48a62745580c28034cde75da 347 Gene3D G3DSA:3.30.1330.10 29 162 4.1E-32 T 09-03-2017 IPR016188 PurM-like, N-terminal domain RG43_RS11800 197ed0ae48a62745580c28034cde75da 347 Gene3D G3DSA:3.90.650.10 176 344 3.5E-20 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain RG43_RS11800 197ed0ae48a62745580c28034cde75da 347 TIGRFAM TIGR00476 selD: selenide, water dikinase 7 313 1.9E-134 T 09-03-2017 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 RG43_RS11800 197ed0ae48a62745580c28034cde75da 347 Hamap MF_00625 Selenide, water dikinase [selD]. 5 347 45.342 T 09-03-2017 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 RG43_RS11800 197ed0ae48a62745580c28034cde75da 347 PIRSF PIRSF036407 1 346 4.8E-117 T 09-03-2017 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 RG43_RS11800 197ed0ae48a62745580c28034cde75da 347 Pfam PF00586 AIR synthase related protein, N-terminal domain 50 157 5.7E-19 T 09-03-2017 IPR016188 PurM-like, N-terminal domain RG43_RS03085 c9d64c9174aefb2a599ee9a9f81fde03 110 Pfam PF03840 Preprotein translocase SecG subunit 5 72 2.2E-21 T 09-03-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RG43_RS03085 c9d64c9174aefb2a599ee9a9f81fde03 110 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 74 1.4E-26 T 09-03-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RG43_RS03085 c9d64c9174aefb2a599ee9a9f81fde03 110 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 7.8E-44 T 09-03-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RG43_RS03085 c9d64c9174aefb2a599ee9a9f81fde03 110 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 7.8E-44 T 09-03-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RG43_RS03085 c9d64c9174aefb2a599ee9a9f81fde03 110 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 7.8E-44 T 09-03-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RG43_RS03085 c9d64c9174aefb2a599ee9a9f81fde03 110 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 7.8E-44 T 09-03-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RG43_RS01740 838205352281ee3792f39070eaba1e18 477 Hamap MF_00484 Glycogen synthase [glgA]. 1 476 47.143 T 09-03-2017 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 RG43_RS01740 838205352281ee3792f39070eaba1e18 477 Pfam PF08323 Starch synthase catalytic domain 2 233 1.3E-71 T 09-03-2017 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 RG43_RS01740 838205352281ee3792f39070eaba1e18 477 Gene3D G3DSA:3.40.50.2000 251 457 5.7E-70 T 09-03-2017 RG43_RS01740 838205352281ee3792f39070eaba1e18 477 SUPERFAMILY SSF53756 5 476 5.58E-117 T 09-03-2017 RG43_RS01740 838205352281ee3792f39070eaba1e18 477 Pfam PF00534 Glycosyl transferases group 1 288 438 1.9E-12 T 09-03-2017 IPR001296 Glycosyl transferase, family 1 RG43_RS01740 838205352281ee3792f39070eaba1e18 477 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 475 1.7E-176 T 09-03-2017 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 RG43_RS23205 d337d6452a6bceb240d4abc16dba8151 139 Pfam PF00384 Molybdopterin oxidoreductase 61 138 1.3E-19 T 09-03-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS23205 d337d6452a6bceb240d4abc16dba8151 139 Gene3D G3DSA:2.20.25.90 1 54 1.7E-21 T 09-03-2017 RG43_RS23205 d337d6452a6bceb240d4abc16dba8151 139 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 6 23 - T 09-03-2017 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 RG43_RS23205 d337d6452a6bceb240d4abc16dba8151 139 Gene3D G3DSA:3.40.50.740 61 136 3.0E-27 T 09-03-2017 RG43_RS23205 d337d6452a6bceb240d4abc16dba8151 139 SUPERFAMILY SSF53706 1 139 6.54E-51 T 09-03-2017 RG43_RS23205 d337d6452a6bceb240d4abc16dba8151 139 SMART SM00926 1 54 8.1E-17 T 09-03-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS23205 d337d6452a6bceb240d4abc16dba8151 139 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 1 53 2.0E-16 T 09-03-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS02970 471f78badf345b30ef2b3edd9adabdfa 188 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 26 178 9.3E-78 T 09-03-2017 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 RG43_RS02970 471f78badf345b30ef2b3edd9adabdfa 188 PIRSF PIRSF006118 13 188 5.6E-75 T 09-03-2017 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 RG43_RS02970 471f78badf345b30ef2b3edd9adabdfa 188 Pfam PF08282 haloacid dehalogenase-like hydrolase 93 158 4.0E-11 T 09-03-2017 IPR023214 HAD-like domain RG43_RS02970 471f78badf345b30ef2b3edd9adabdfa 188 SUPERFAMILY SSF56784 22 181 1.97E-41 T 09-03-2017 IPR023214 HAD-like domain RG43_RS02970 471f78badf345b30ef2b3edd9adabdfa 188 Gene3D G3DSA:3.40.50.1000 16 181 1.4E-49 T 09-03-2017 IPR023214 HAD-like domain RG43_RS24550 ed29993cf859e7bc56aba9437df4de6f 211 SUPERFAMILY SSF81342 4 205 9.28E-55 T 09-03-2017 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 RG43_RS24550 ed29993cf859e7bc56aba9437df4de6f 211 Pfam PF01292 Prokaryotic cytochrome b561 9 184 3.3E-22 T 09-03-2017 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 RG43_RS24550 ed29993cf859e7bc56aba9437df4de6f 211 Gene3D G3DSA:1.20.950.20 1 209 3.8E-71 T 09-03-2017 RG43_RS24550 ed29993cf859e7bc56aba9437df4de6f 211 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 7 204 3.5E-66 T 09-03-2017 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 RG43_RS08855 9616167ae8a8e93514c6041c1f1cdc4e 94 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 6 93 1.0E-45 T 09-03-2017 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 RG43_RS08855 9616167ae8a8e93514c6041c1f1cdc4e 94 Pfam PF01386 Ribosomal L25p family 4 91 2.2E-25 T 09-03-2017 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 RG43_RS08855 9616167ae8a8e93514c6041c1f1cdc4e 94 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 2 94 28.53 T 09-03-2017 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 RG43_RS08855 9616167ae8a8e93514c6041c1f1cdc4e 94 SUPERFAMILY SSF50715 1 93 1.13E-31 T 09-03-2017 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 RG43_RS08855 9616167ae8a8e93514c6041c1f1cdc4e 94 Gene3D G3DSA:2.40.240.10 1 93 1.3E-35 T 09-03-2017 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 RG43_RS16680 6a7df134650c8c63944c31906f9f59b1 578 Gene3D G3DSA:3.40.50.300 324 552 2.0E-68 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16680 6a7df134650c8c63944c31906f9f59b1 578 Gene3D G3DSA:3.40.50.300 2 227 6.1E-60 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16680 6a7df134650c8c63944c31906f9f59b1 578 SUPERFAMILY SSF52540 5 226 4.42E-54 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16680 6a7df134650c8c63944c31906f9f59b1 578 Pfam PF00005 ABC transporter 346 489 9.9E-29 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS16680 6a7df134650c8c63944c31906f9f59b1 578 Pfam PF00005 ABC transporter 26 165 3.2E-25 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS16680 6a7df134650c8c63944c31906f9f59b1 578 SMART SM00382 354 535 6.2E-15 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS16680 6a7df134650c8c63944c31906f9f59b1 578 SMART SM00382 32 266 6.7E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS16680 6a7df134650c8c63944c31906f9f59b1 578 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS16680 6a7df134650c8c63944c31906f9f59b1 578 SUPERFAMILY SSF52540 325 549 5.98E-61 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS15900 6b4d5a6f3e767dc847cf5527c9839c2f 263 Gene3D G3DSA:1.10.3720.10 55 249 3.4E-27 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS15900 6b4d5a6f3e767dc847cf5527c9839c2f 263 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 247 8.3E-28 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS15900 6b4d5a6f3e767dc847cf5527c9839c2f 263 SUPERFAMILY SSF161098 56 237 4.97E-36 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS18055 1a3d18fa4a35b13df73e9a69b4707a58 187 SUPERFAMILY SSF52833 1 186 6.41E-54 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS18055 1a3d18fa4a35b13df73e9a69b4707a58 187 PIRSF PIRSF000239 1 187 2.7E-50 T 09-03-2017 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 RG43_RS18055 1a3d18fa4a35b13df73e9a69b4707a58 187 Pfam PF00578 AhpC/TSA family 10 133 5.8E-33 T 09-03-2017 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 RG43_RS18055 1a3d18fa4a35b13df73e9a69b4707a58 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 2.7E-103 T 09-03-2017 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RG43_RS18055 1a3d18fa4a35b13df73e9a69b4707a58 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 181 1.8E-6 T 09-03-2017 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 RG43_RS18055 1a3d18fa4a35b13df73e9a69b4707a58 187 Gene3D G3DSA:3.40.30.10 4 183 2.4E-59 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS02985 aa53ba350b6b6501f566c61bb7e8eb2c 269 Gene3D G3DSA:3.40.50.300 7 238 7.9E-67 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS02985 aa53ba350b6b6501f566c61bb7e8eb2c 269 SUPERFAMILY SSF52540 8 237 1.66E-63 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS02985 aa53ba350b6b6501f566c61bb7e8eb2c 269 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS02985 aa53ba350b6b6501f566c61bb7e8eb2c 269 SMART SM00382 33 229 1.5E-14 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS02985 aa53ba350b6b6501f566c61bb7e8eb2c 269 Pfam PF00005 ABC transporter 25 172 8.0E-29 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS06655 dc53afad12a0f784058f00d211e93e90 453 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 6.4E-23 T 09-03-2017 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 RG43_RS06655 dc53afad12a0f784058f00d211e93e90 453 SMART SM00962 100 296 4.1E-120 T 09-03-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 RG43_RS06655 dc53afad12a0f784058f00d211e93e90 453 Gene3D G3DSA:1.20.120.140 2 89 3.7E-36 T 09-03-2017 RG43_RS06655 dc53afad12a0f784058f00d211e93e90 453 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 35.006 T 09-03-2017 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 RG43_RS06655 dc53afad12a0f784058f00d211e93e90 453 SMART SM00963 1 86 2.4E-37 T 09-03-2017 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 RG43_RS06655 dc53afad12a0f784058f00d211e93e90 453 Gene3D G3DSA:3.40.50.300 94 297 1.5E-79 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS06655 dc53afad12a0f784058f00d211e93e90 453 Gene3D G3DSA:1.10.260.30 329 432 1.6E-41 T 09-03-2017 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 RG43_RS06655 dc53afad12a0f784058f00d211e93e90 453 Pfam PF02978 Signal peptide binding domain 329 427 2.1E-33 T 09-03-2017 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 RG43_RS06655 dc53afad12a0f784058f00d211e93e90 453 SUPERFAMILY SSF47446 329 431 3.6E-39 T 09-03-2017 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 RG43_RS06655 dc53afad12a0f784058f00d211e93e90 453 SMART SM00382 99 247 7.9E-8 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS06655 dc53afad12a0f784058f00d211e93e90 453 SUPERFAMILY SSF52540 42 354 1.21E-58 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS06655 dc53afad12a0f784058f00d211e93e90 453 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 1.1E-75 T 09-03-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 RG43_RS06655 dc53afad12a0f784058f00d211e93e90 453 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 09-03-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 RG43_RS06655 dc53afad12a0f784058f00d211e93e90 453 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 4.2E-182 T 09-03-2017 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 RG43_RS21760 a104b1662c4899b68c60010d198cbb87 78 Pfam PF07256 Protein of unknown function (DUF1435) 1 75 3.1E-33 T 09-03-2017 IPR009885 Protein of unknown function DUF1435 RG43_RS21760 a104b1662c4899b68c60010d198cbb87 78 ProDom PD058594 MEMBRANE INNER C5447 MAJOR ECS5328 THE SUPERFAMILY PERMEASES STY4905 YJJZ 1 78 4.0E-37 T 09-03-2017 IPR009885 Protein of unknown function DUF1435 RG43_RS20935 6b73c18561b7d2aa855e5fb33fb427a0 120 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 117 3.0E-62 T 09-03-2017 IPR008249 Uncharacterised protein family UPF0231 RG43_RS20935 6b73c18561b7d2aa855e5fb33fb427a0 120 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 117 5.6E-43 T 09-03-2017 IPR008249 Uncharacterised protein family UPF0231 RG43_RS20935 6b73c18561b7d2aa855e5fb33fb427a0 120 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 119 30.23 T 09-03-2017 IPR008249 Uncharacterised protein family UPF0231 RG43_RS20935 6b73c18561b7d2aa855e5fb33fb427a0 120 PIRSF PIRSF006287 1 120 4.2E-50 T 09-03-2017 IPR008249 Uncharacterised protein family UPF0231 RG43_RS02495 e97ebe0750cea743d147d9f5f771bfc2 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 9.4E-12 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RG43_RS02495 e97ebe0750cea743d147d9f5f771bfc2 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 9.4E-12 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RG43_RS02495 e97ebe0750cea743d147d9f5f771bfc2 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 9.4E-12 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RG43_RS02495 e97ebe0750cea743d147d9f5f771bfc2 141 Gene3D G3DSA:1.10.1660.10 1 56 3.6E-28 T 09-03-2017 RG43_RS02495 e97ebe0750cea743d147d9f5f771bfc2 141 SUPERFAMILY SSF46955 2 121 2.53E-35 T 09-03-2017 IPR009061 Putative DNA-binding domain RG43_RS02495 e97ebe0750cea743d147d9f5f771bfc2 141 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 131 3.8E-62 T 09-03-2017 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 RG43_RS02495 e97ebe0750cea743d147d9f5f771bfc2 141 Gene3D G3DSA:1.10.1660.10 57 136 3.7E-34 T 09-03-2017 RG43_RS02495 e97ebe0750cea743d147d9f5f771bfc2 141 Pfam PF13411 MerR HTH family regulatory protein 2 69 6.8E-21 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RG43_RS02495 e97ebe0750cea743d147d9f5f771bfc2 141 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RG43_RS02495 e97ebe0750cea743d147d9f5f771bfc2 141 SMART SM00422 2 71 2.1E-34 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RG43_RS06145 58216af11ca71371bf7a8801dbe9637f 330 Pfam PF04539 Sigma-70 region 3 174 248 1.2E-20 T 09-03-2017 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS06145 58216af11ca71371bf7a8801dbe9637f 330 Pfam PF04542 Sigma-70 region 2 94 163 3.3E-21 T 09-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS06145 58216af11ca71371bf7a8801dbe9637f 330 PRINTS PR00046 Major sigma-70 factor signature 266 278 2.5E-27 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS06145 58216af11ca71371bf7a8801dbe9637f 330 PRINTS PR00046 Major sigma-70 factor signature 287 302 2.5E-27 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS06145 58216af11ca71371bf7a8801dbe9637f 330 PRINTS PR00046 Major sigma-70 factor signature 118 131 2.5E-27 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS06145 58216af11ca71371bf7a8801dbe9637f 330 PRINTS PR00046 Major sigma-70 factor signature 302 313 2.5E-27 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS06145 58216af11ca71371bf7a8801dbe9637f 330 PRINTS PR00046 Major sigma-70 factor signature 142 150 2.5E-27 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS06145 58216af11ca71371bf7a8801dbe9637f 330 SUPERFAMILY SSF88946 56 164 2.75E-45 T 09-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS06145 58216af11ca71371bf7a8801dbe9637f 330 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 3 328 40.0 T 09-03-2017 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS06145 58216af11ca71371bf7a8801dbe9637f 330 Gene3D G3DSA:1.10.10.10 167 216 2.3E-15 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS06145 58216af11ca71371bf7a8801dbe9637f 330 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 48 328 4.4E-145 T 09-03-2017 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS06145 58216af11ca71371bf7a8801dbe9637f 330 Gene3D G3DSA:1.10.10.10 257 322 2.4E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS06145 58216af11ca71371bf7a8801dbe9637f 330 Pfam PF00140 Sigma-70 factor, region 1.2 56 88 3.0E-11 T 09-03-2017 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS06145 58216af11ca71371bf7a8801dbe9637f 330 SUPERFAMILY SSF88659 225 323 1.46E-23 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS06145 58216af11ca71371bf7a8801dbe9637f 330 Gene3D G3DSA:1.10.601.10 50 163 9.6E-55 T 09-03-2017 RG43_RS06145 58216af11ca71371bf7a8801dbe9637f 330 Pfam PF04545 Sigma-70, region 4 262 315 1.8E-15 T 09-03-2017 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS06145 58216af11ca71371bf7a8801dbe9637f 330 SUPERFAMILY SSF88659 167 241 8.72E-15 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS06145 58216af11ca71371bf7a8801dbe9637f 330 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 287 313 - T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS06145 58216af11ca71371bf7a8801dbe9637f 330 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 118 131 - T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS06145 58216af11ca71371bf7a8801dbe9637f 330 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 90 317 5.5E-35 T 09-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS24480 b5f83406d983932b6a927719950a7cf9 312 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 274 289 4.3E-6 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RG43_RS24480 b5f83406d983932b6a927719950a7cf9 312 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 289 305 4.3E-6 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RG43_RS24480 b5f83406d983932b6a927719950a7cf9 312 Gene3D G3DSA:2.60.120.280 57 192 1.7E-14 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RG43_RS24480 b5f83406d983932b6a927719950a7cf9 312 Hamap MF_01533 HTH-type transcriptional activator RhaR [rhaR]. 31 312 52.383 T 09-03-2017 IPR023699 Transcription activator HTH, RhaR GO:0003700|GO:0005737|GO:0019299|GO:0045893 RG43_RS24480 b5f83406d983932b6a927719950a7cf9 312 SUPERFAMILY SSF51182 37 180 9.78E-15 T 09-03-2017 IPR011051 RmlC-like cupin domain RG43_RS24480 b5f83406d983932b6a927719950a7cf9 312 Pfam PF02311 AraC-like ligand binding domain 52 170 2.8E-22 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RG43_RS24480 b5f83406d983932b6a927719950a7cf9 312 SMART SM00342 222 305 6.9E-32 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS24480 b5f83406d983932b6a927719950a7cf9 312 SUPERFAMILY SSF46689 258 306 9.41E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS24480 b5f83406d983932b6a927719950a7cf9 312 Gene3D G3DSA:1.10.10.60 201 258 1.1E-11 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS24480 b5f83406d983932b6a927719950a7cf9 312 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 259 301 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RG43_RS24480 b5f83406d983932b6a927719950a7cf9 312 SUPERFAMILY SSF46689 207 257 9.86E-5 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS24480 b5f83406d983932b6a927719950a7cf9 312 Pfam PF12833 Helix-turn-helix domain 229 305 1.2E-21 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS24480 b5f83406d983932b6a927719950a7cf9 312 Gene3D G3DSA:1.10.10.60 259 306 8.2E-16 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS19085 f82d9f1e03ae2764a43c443c8bfd1c3e 471 Pfam PF00245 Alkaline phosphatase 64 430 9.1E-134 T 09-03-2017 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 RG43_RS19085 f82d9f1e03ae2764a43c443c8bfd1c3e 471 Gene3D G3DSA:3.40.720.10 48 470 2.0E-141 T 09-03-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RG43_RS19085 f82d9f1e03ae2764a43c443c8bfd1c3e 471 SMART SM00098 65 471 6.6E-243 T 09-03-2017 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 RG43_RS19085 f82d9f1e03ae2764a43c443c8bfd1c3e 471 SUPERFAMILY SSF53649 37 470 5.35E-141 T 09-03-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RG43_RS19085 f82d9f1e03ae2764a43c443c8bfd1c3e 471 ProSitePatterns PS00123 Alkaline phosphatase active site. 121 129 - T 09-03-2017 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 RG43_RS19085 f82d9f1e03ae2764a43c443c8bfd1c3e 471 PRINTS PR00113 Alkaline phosphatase signature 121 136 1.2E-49 T 09-03-2017 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 RG43_RS19085 f82d9f1e03ae2764a43c443c8bfd1c3e 471 PRINTS PR00113 Alkaline phosphatase signature 64 84 1.2E-49 T 09-03-2017 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 RG43_RS19085 f82d9f1e03ae2764a43c443c8bfd1c3e 471 PRINTS PR00113 Alkaline phosphatase signature 320 349 1.2E-49 T 09-03-2017 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 RG43_RS19085 f82d9f1e03ae2764a43c443c8bfd1c3e 471 PRINTS PR00113 Alkaline phosphatase signature 221 231 1.2E-49 T 09-03-2017 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 RG43_RS19085 f82d9f1e03ae2764a43c443c8bfd1c3e 471 PRINTS PR00113 Alkaline phosphatase signature 158 178 1.2E-49 T 09-03-2017 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 RG43_RS03065 a04f362abdb231dcff8b802527688b2f 209 Pfam PF01728 FtsJ-like methyltransferase 31 206 1.6E-58 T 09-03-2017 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 RG43_RS03065 a04f362abdb231dcff8b802527688b2f 209 Gene3D G3DSA:3.40.50.150 1 208 7.3E-74 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS03065 a04f362abdb231dcff8b802527688b2f 209 SUPERFAMILY SSF53335 31 208 1.09E-43 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS03065 a04f362abdb231dcff8b802527688b2f 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 11 207 27.794 T 09-03-2017 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 RG43_RS03065 a04f362abdb231dcff8b802527688b2f 209 TIGRFAM TIGR00438 rrmJ: ribosomal RNA large subunit methyltransferase J 20 206 4.9E-97 T 09-03-2017 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria GO:0006364|GO:0016436 KEGG: 00564+2.1.1.16 RG43_RS03065 a04f362abdb231dcff8b802527688b2f 209 PIRSF PIRSF005461 1 209 8.8E-83 T 09-03-2017 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 RG43_RS05435 9343ddd8990f38f7258a5c6c386fff9d 592 Gene3D G3DSA:1.10.8.60 446 524 6.3E-20 T 09-03-2017 RG43_RS05435 9343ddd8990f38f7258a5c6c386fff9d 592 Pfam PF02954 Bacterial regulatory protein, Fis family 548 587 3.5E-13 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RG43_RS05435 9343ddd8990f38f7258a5c6c386fff9d 592 Gene3D G3DSA:3.40.50.300 269 445 9.6E-60 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS05435 9343ddd8990f38f7258a5c6c386fff9d 592 Gene3D G3DSA:3.30.450.20 159 209 1.3E-7 T 09-03-2017 RG43_RS05435 9343ddd8990f38f7258a5c6c386fff9d 592 SMART SM00382 292 436 1.4E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS05435 9343ddd8990f38f7258a5c6c386fff9d 592 SUPERFAMILY SSF46689 545 589 1.32E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS05435 9343ddd8990f38f7258a5c6c386fff9d 592 SMART SM00091 160 225 1.5E-4 T 09-03-2017 IPR000014 PAS domain RG43_RS05435 9343ddd8990f38f7258a5c6c386fff9d 592 SUPERFAMILY SSF55785 161 207 4.71E-8 T 09-03-2017 IPR000014 PAS domain RG43_RS05435 9343ddd8990f38f7258a5c6c386fff9d 592 Gene3D G3DSA:3.30.450.40 59 133 8.2E-4 T 09-03-2017 IPR029016 GAF domain-like RG43_RS05435 9343ddd8990f38f7258a5c6c386fff9d 592 Pfam PF00158 Sigma-54 interaction domain 272 440 2.1E-68 T 09-03-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RG43_RS05435 9343ddd8990f38f7258a5c6c386fff9d 592 SUPERFAMILY SSF52540 272 511 4.93E-69 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS05435 9343ddd8990f38f7258a5c6c386fff9d 592 Gene3D G3DSA:1.10.10.60 541 589 1.6E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS05435 9343ddd8990f38f7258a5c6c386fff9d 592 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 359 374 - T 09-03-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RG43_RS05435 9343ddd8990f38f7258a5c6c386fff9d 592 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 486 495 - T 09-03-2017 IPR025944 Sigma-54 interaction domain, conserved site RG43_RS05435 9343ddd8990f38f7258a5c6c386fff9d 592 Pfam PF13188 PAS domain 162 208 4.8E-6 T 09-03-2017 IPR000014 PAS domain RG43_RS05435 9343ddd8990f38f7258a5c6c386fff9d 592 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 296 309 - T 09-03-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RG43_RS07085 3767db02fb1dd7702b64ddc00ee74345 296 SUPERFAMILY SSF53850 89 294 7.19E-40 T 09-03-2017 RG43_RS07085 3767db02fb1dd7702b64ddc00ee74345 296 Gene3D G3DSA:3.40.190.10 174 264 6.7E-21 T 09-03-2017 RG43_RS07085 3767db02fb1dd7702b64ddc00ee74345 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.6E-9 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS07085 3767db02fb1dd7702b64ddc00ee74345 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.6E-9 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS07085 3767db02fb1dd7702b64ddc00ee74345 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.6E-9 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS07085 3767db02fb1dd7702b64ddc00ee74345 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 8.9E-24 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS07085 3767db02fb1dd7702b64ddc00ee74345 296 SUPERFAMILY SSF46785 1 83 9.47E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS07085 3767db02fb1dd7702b64ddc00ee74345 296 Gene3D G3DSA:1.10.10.10 1 85 1.4E-30 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS07085 3767db02fb1dd7702b64ddc00ee74345 296 Pfam PF03466 LysR substrate binding domain 88 291 1.1E-43 T 09-03-2017 IPR005119 LysR, substrate-binding RG43_RS07085 3767db02fb1dd7702b64ddc00ee74345 296 Gene3D G3DSA:3.40.190.10 91 173 9.4E-26 T 09-03-2017 RG43_RS24945 2d4de59f2ac9b7c0d2a3091fb50d1cf3 281 Pfam PF01418 Helix-turn-helix domain, rpiR family 6 77 5.2E-22 T 09-03-2017 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 RG43_RS24945 2d4de59f2ac9b7c0d2a3091fb50d1cf3 281 SUPERFAMILY SSF53697 103 269 7.69E-34 T 09-03-2017 RG43_RS24945 2d4de59f2ac9b7c0d2a3091fb50d1cf3 281 Gene3D G3DSA:1.10.10.10 6 66 1.5E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS24945 2d4de59f2ac9b7c0d2a3091fb50d1cf3 281 Gene3D G3DSA:3.40.50.10490 67 271 5.6E-33 T 09-03-2017 RG43_RS24945 2d4de59f2ac9b7c0d2a3091fb50d1cf3 281 Pfam PF01380 SIS domain 126 255 1.6E-20 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 RG43_RS24945 2d4de59f2ac9b7c0d2a3091fb50d1cf3 281 SUPERFAMILY SSF46689 6 79 1.63E-21 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS20315 9b646564f3c85877f7c822d9267c12dc 273 Pfam PF06067 Domain of unknown function (DUF932) 37 262 2.2E-53 T 09-03-2017 IPR026325 Protein of unknown function DUF932 RG43_RS07300 313e3944fc2a0adf6530841e4fbd8fe0 212 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 133 156 - T 09-03-2017 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RG43_RS07300 313e3944fc2a0adf6530841e4fbd8fe0 212 Gene3D G3DSA:3.40.50.170 1 199 1.8E-71 T 09-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RG43_RS07300 313e3944fc2a0adf6530841e4fbd8fe0 212 Pfam PF00551 Formyl transferase 1 181 3.5E-68 T 09-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RG43_RS07300 313e3944fc2a0adf6530841e4fbd8fe0 212 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 1 191 6.5E-85 T 09-03-2017 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 RG43_RS07300 313e3944fc2a0adf6530841e4fbd8fe0 212 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 2 187 31.843 T 09-03-2017 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 RG43_RS07300 313e3944fc2a0adf6530841e4fbd8fe0 212 SUPERFAMILY SSF53328 1 205 8.24E-67 T 09-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RG43_RS10070 5d88ea27e95c24e146db18b083197392 181 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 3 180 2.5E-64 T 09-03-2017 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 RG43_RS10070 5d88ea27e95c24e146db18b083197392 181 PIRSF PIRSF006135 1 181 1.1E-65 T 09-03-2017 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 RG43_RS10070 5d88ea27e95c24e146db18b083197392 181 Gene3D G3DSA:3.40.50.300 2 181 4.1E-70 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS10070 5d88ea27e95c24e146db18b083197392 181 SUPERFAMILY SSF52540 2 181 3.17E-58 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS24785 819b1b847c6aca46dc26c5d0b9feac1a 204 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 1 204 4.4E-87 T 09-03-2017 IPR015796 Impact family, bacterial/archaeal RG43_RS24785 819b1b847c6aca46dc26c5d0b9feac1a 204 Gene3D G3DSA:3.30.230.30 6 131 6.6E-43 T 09-03-2017 IPR001498 Impact, N-terminal RG43_RS24785 819b1b847c6aca46dc26c5d0b9feac1a 204 Pfam PF09186 Domain of unknown function (DUF1949) 141 195 8.1E-15 T 09-03-2017 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal RG43_RS24785 819b1b847c6aca46dc26c5d0b9feac1a 204 Gene3D G3DSA:3.30.70.240 135 204 7.2E-33 T 09-03-2017 IPR000640 Translation elongation factor EFG, V domain RG43_RS24785 819b1b847c6aca46dc26c5d0b9feac1a 204 SUPERFAMILY SSF54211 3 131 3.79E-42 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold RG43_RS24785 819b1b847c6aca46dc26c5d0b9feac1a 204 Pfam PF01205 Uncharacterized protein family UPF0029 18 125 3.8E-26 T 09-03-2017 IPR001498 Impact, N-terminal RG43_RS24785 819b1b847c6aca46dc26c5d0b9feac1a 204 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 80 109 - T 09-03-2017 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site RG43_RS24785 819b1b847c6aca46dc26c5d0b9feac1a 204 SUPERFAMILY SSF54980 136 203 1.04E-18 T 09-03-2017 IPR009022 Elongation factor G, III-V domain RG43_RS08670 2415236045c756177243e708aded2424 608 SMART SM00388 388 453 1.8E-19 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS08670 2415236045c756177243e708aded2424 608 SMART SM00387 495 602 2.7E-35 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS08670 2415236045c756177243e708aded2424 608 Pfam PF00989 PAS fold 265 369 1.6E-21 T 09-03-2017 IPR013767 PAS fold GO:0006355 RG43_RS08670 2415236045c756177243e708aded2424 608 SUPERFAMILY SSF47384 379 452 1.88E-16 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS08670 2415236045c756177243e708aded2424 608 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 496 599 2.0E-20 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS08670 2415236045c756177243e708aded2424 608 Pfam PF00512 His Kinase A (phospho-acceptor) domain 389 450 1.4E-16 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS08670 2415236045c756177243e708aded2424 608 PRINTS PR00344 Bacterial sensor protein C-terminal signature 551 561 1.1E-17 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS08670 2415236045c756177243e708aded2424 608 PRINTS PR00344 Bacterial sensor protein C-terminal signature 586 599 1.1E-17 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS08670 2415236045c756177243e708aded2424 608 PRINTS PR00344 Bacterial sensor protein C-terminal signature 533 547 1.1E-17 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS08670 2415236045c756177243e708aded2424 608 PRINTS PR00344 Bacterial sensor protein C-terminal signature 562 580 1.1E-17 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS08670 2415236045c756177243e708aded2424 608 Pfam PF00672 HAMP domain 193 259 5.5E-7 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RG43_RS08670 2415236045c756177243e708aded2424 608 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 265 379 1.7E-16 T 09-03-2017 IPR000014 PAS domain RG43_RS08670 2415236045c756177243e708aded2424 608 SMART SM00304 212 262 3.3E-4 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RG43_RS08670 2415236045c756177243e708aded2424 608 Gene3D G3DSA:3.30.450.20 256 371 2.1E-23 T 09-03-2017 RG43_RS08670 2415236045c756177243e708aded2424 608 SUPERFAMILY SSF55785 253 367 1.74E-18 T 09-03-2017 IPR000014 PAS domain RG43_RS08670 2415236045c756177243e708aded2424 608 Gene3D G3DSA:1.10.287.130 382 449 1.7E-16 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS08670 2415236045c756177243e708aded2424 608 SUPERFAMILY SSF55874 443 602 6.68E-43 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS08670 2415236045c756177243e708aded2424 608 Gene3D G3DSA:3.30.565.10 456 600 2.5E-41 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS08670 2415236045c756177243e708aded2424 608 SMART SM00091 262 329 2.6E-11 T 09-03-2017 IPR000014 PAS domain RG43_RS12730 c4584394aa5ff21f3b92fbeabf62f28b 204 PIRSF PIRSF004690 2 204 1.0E-63 T 09-03-2017 IPR026269 Tat proofreading chaperone DmsD-type RG43_RS12730 c4584394aa5ff21f3b92fbeabf62f28b 204 Gene3D G3DSA:1.10.3480.10 4 204 3.8E-62 T 09-03-2017 IPR020945 DMSO/Nitrate reductase chaperone RG43_RS12730 c4584394aa5ff21f3b92fbeabf62f28b 204 SUPERFAMILY SSF89155 3 200 1.44E-57 T 09-03-2017 IPR020945 DMSO/Nitrate reductase chaperone RG43_RS12730 c4584394aa5ff21f3b92fbeabf62f28b 204 Hamap MF_00940 Tat proofreading chaperone DmsD [dmsD]. 5 204 41.91 T 09-03-2017 IPR028611 Tat proofreading chaperone DmsD GO:0005048 RG43_RS12730 c4584394aa5ff21f3b92fbeabf62f28b 204 Pfam PF02613 Nitrate reductase delta subunit 51 163 2.5E-23 T 09-03-2017 IPR020945 DMSO/Nitrate reductase chaperone RG43_RS07075 f94ea1af1bf2182ff036cc917b6e5f09 172 Gene3D G3DSA:3.10.450.50 3 172 1.2E-64 T 09-03-2017 IPR032710 NTF2-like domain RG43_RS07075 f94ea1af1bf2182ff036cc917b6e5f09 172 Pfam PF00866 Ring hydroxylating beta subunit 19 164 4.3E-49 T 09-03-2017 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 RG43_RS07075 f94ea1af1bf2182ff036cc917b6e5f09 172 Hamap MF_01649 3-phenylpropionate/cinnamic acid dioxygenase subunit beta [hcaF]. 1 172 52.888 T 09-03-2017 IPR023712 3-phenylpropionate/cinnamic acid dioxygenase, beta subunit GO:0008695|GO:0055114 KEGG: 00360+1.14.12.19|MetaCyc: PWY-6690 RG43_RS07075 f94ea1af1bf2182ff036cc917b6e5f09 172 SUPERFAMILY SSF54427 5 171 4.64E-43 T 09-03-2017 IPR032710 NTF2-like domain RG43_RS13910 2260ff998867594ff6b17496c0063a0c 472 Gene3D G3DSA:3.10.20.70 25 136 2.3E-9 T 09-03-2017 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RG43_RS13910 2260ff998867594ff6b17496c0063a0c 472 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 271 286 - T 09-03-2017 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 RG43_RS13910 2260ff998867594ff6b17496c0063a0c 472 SUPERFAMILY SSF54368 25 132 6.28E-9 T 09-03-2017 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RG43_RS13910 2260ff998867594ff6b17496c0063a0c 472 Gene3D G3DSA:3.30.590.10 137 458 1.1E-87 T 09-03-2017 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 RG43_RS13910 2260ff998867594ff6b17496c0063a0c 472 SUPERFAMILY SSF55931 134 469 9.81E-96 T 09-03-2017 RG43_RS13910 2260ff998867594ff6b17496c0063a0c 472 SMART SM01230 133 390 4.2E-94 T 09-03-2017 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RG43_RS13910 2260ff998867594ff6b17496c0063a0c 472 Pfam PF00120 Glutamine synthetase, catalytic domain 134 467 9.6E-103 T 09-03-2017 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RG43_RS02370 b8dda3d5223018c567ea5f3ca22e9fbc 273 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 09-03-2017 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02370 b8dda3d5223018c567ea5f3ca22e9fbc 273 SMART SM01382 124 251 7.5E-90 T 09-03-2017 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 RG43_RS02370 b8dda3d5223018c567ea5f3ca22e9fbc 273 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 249 8.5E-56 T 09-03-2017 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 RG43_RS02370 b8dda3d5223018c567ea5f3ca22e9fbc 273 Gene3D G3DSA:2.40.50.140 1 114 8.9E-51 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS02370 b8dda3d5223018c567ea5f3ca22e9fbc 273 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 272 47.144 T 09-03-2017 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS02370 b8dda3d5223018c567ea5f3ca22e9fbc 273 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 272 3.6E-132 T 09-03-2017 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS02370 b8dda3d5223018c567ea5f3ca22e9fbc 273 SUPERFAMILY SSF50249 3 125 5.14E-50 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS02370 b8dda3d5223018c567ea5f3ca22e9fbc 273 SUPERFAMILY SSF50104 126 269 1.44E-59 T 09-03-2017 IPR008991 Translation protein SH3-like domain RG43_RS02370 b8dda3d5223018c567ea5f3ca22e9fbc 273 PIRSF PIRSF002158 12 273 1.1E-100 T 09-03-2017 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS02370 b8dda3d5223018c567ea5f3ca22e9fbc 273 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 7.7E-34 T 09-03-2017 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS02370 b8dda3d5223018c567ea5f3ca22e9fbc 273 SMART SM01383 42 118 1.9E-48 T 09-03-2017 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS02370 b8dda3d5223018c567ea5f3ca22e9fbc 273 Gene3D G3DSA:4.10.950.10 196 272 1.8E-34 T 09-03-2017 IPR014726 Ribosomal protein L2, domain 3 RG43_RS02370 b8dda3d5223018c567ea5f3ca22e9fbc 273 Gene3D G3DSA:2.30.30.30 119 195 2.4E-34 T 09-03-2017 IPR014722 Ribosomal protein L2 domain 2 RG43_RS13515 0fbdd428dda84bf83968083ebae86c52 176 Pfam PF01292 Prokaryotic cytochrome b561 4 172 1.9E-21 T 09-03-2017 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 RG43_RS13515 0fbdd428dda84bf83968083ebae86c52 176 SUPERFAMILY SSF81342 4 172 1.02E-27 T 09-03-2017 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 RG43_RS22335 d8a6a0bbda1c3b229393b706dd5cee3e 318 SUPERFAMILY SSF53822 23 310 8.92E-72 T 09-03-2017 IPR028082 Periplasmic binding protein-like I RG43_RS22335 d8a6a0bbda1c3b229393b706dd5cee3e 318 Pfam PF13407 Periplasmic binding protein domain 26 274 8.5E-45 T 09-03-2017 IPR025997 Periplasmic binding protein RG43_RS22335 d8a6a0bbda1c3b229393b706dd5cee3e 318 Gene3D G3DSA:3.40.50.2300 140 308 3.4E-45 T 09-03-2017 RG43_RS22335 d8a6a0bbda1c3b229393b706dd5cee3e 318 Gene3D G3DSA:3.40.50.2300 25 139 2.0E-28 T 09-03-2017 RG43_RS16440 e3026565cedf656eb1b5c27a5c72c4fd 441 SUPERFAMILY SSF102114 107 371 5.89E-54 T 09-03-2017 RG43_RS16440 e3026565cedf656eb1b5c27a5c72c4fd 441 Pfam PF04055 Radical SAM superfamily 146 323 3.1E-30 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 RG43_RS16440 e3026565cedf656eb1b5c27a5c72c4fd 441 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 9 438 9.2E-203 T 09-03-2017 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 RG43_RS16440 e3026565cedf656eb1b5c27a5c72c4fd 441 SMART SM00729 140 365 5.5E-56 T 09-03-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RG43_RS16440 e3026565cedf656eb1b5c27a5c72c4fd 441 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 9 438 1.7E-110 T 09-03-2017 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 RG43_RS16440 e3026565cedf656eb1b5c27a5c72c4fd 441 Gene3D G3DSA:2.40.50.140 380 441 1.3E-25 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS16440 e3026565cedf656eb1b5c27a5c72c4fd 441 Pfam PF00919 Uncharacterized protein family UPF0004 9 96 2.2E-21 T 09-03-2017 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 RG43_RS16440 e3026565cedf656eb1b5c27a5c72c4fd 441 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 8 440 64.107 T 09-03-2017 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 RG43_RS16440 e3026565cedf656eb1b5c27a5c72c4fd 441 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 144 164 - T 09-03-2017 IPR020612 Methylthiotransferase, conserved site GO:0051539 RG43_RS16440 e3026565cedf656eb1b5c27a5c72c4fd 441 Gene3D G3DSA:3.80.30.20 138 377 2.8E-76 T 09-03-2017 IPR023404 Radical SAM, alpha/beta horseshoe RG43_RS22655 1691e9cc01d400a451a98a4ab316455c 419 TIGRFAM TIGR01933 hflK: HflK protein 97 356 8.6E-126 T 09-03-2017 IPR010201 HflK GO:0016021 RG43_RS22655 1691e9cc01d400a451a98a4ab316455c 419 SMART SM00244 95 255 1.0E-44 T 09-03-2017 IPR001107 Band 7 domain RG43_RS22655 1691e9cc01d400a451a98a4ab316455c 419 PRINTS PR00721 Stomatin signature 102 124 9.2E-7 T 09-03-2017 IPR001972 Stomatin family GO:0016020 RG43_RS22655 1691e9cc01d400a451a98a4ab316455c 419 PRINTS PR00721 Stomatin signature 184 201 9.2E-7 T 09-03-2017 IPR001972 Stomatin family GO:0016020 RG43_RS22655 1691e9cc01d400a451a98a4ab316455c 419 PRINTS PR00721 Stomatin signature 149 170 9.2E-7 T 09-03-2017 IPR001972 Stomatin family GO:0016020 RG43_RS22655 1691e9cc01d400a451a98a4ab316455c 419 Pfam PF01145 SPFH domain / Band 7 family 99 270 5.4E-32 T 09-03-2017 IPR001107 Band 7 domain RG43_RS22655 1691e9cc01d400a451a98a4ab316455c 419 Pfam PF12221 Bacterial membrane protein N terminal 1 59 6.2E-15 T 09-03-2017 IPR020980 Menbrane protein HflK, N-terminal RG43_RS22655 1691e9cc01d400a451a98a4ab316455c 419 SUPERFAMILY SSF117892 128 259 4.58E-21 T 09-03-2017 IPR001107 Band 7 domain RG43_RS23005 6da51f605a6d8b0aed027998b72f6c2f 445 PIRSF PIRSF006060 1 435 1.0E-61 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RG43_RS23005 6da51f605a6d8b0aed027998b72f6c2f 445 Pfam PF13520 Amino acid permease 12 403 6.0E-50 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RG43_RS09505 f96e027f60680c93ee7233fbdb28bfec 193 Pfam PF00692 dUTPase 78 185 6.6E-9 T 09-03-2017 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 RG43_RS09505 f96e027f60680c93ee7233fbdb28bfec 193 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 2 190 1.5E-67 T 09-03-2017 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 RG43_RS09505 f96e027f60680c93ee7233fbdb28bfec 193 SUPERFAMILY SSF51283 1 193 1.44E-59 T 09-03-2017 IPR029054 dUTPase-like RG43_RS09505 f96e027f60680c93ee7233fbdb28bfec 193 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 190 34.266 T 09-03-2017 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 RG43_RS09505 f96e027f60680c93ee7233fbdb28bfec 193 Gene3D G3DSA:2.70.40.10 1 192 1.1E-60 T 09-03-2017 IPR029054 dUTPase-like RG43_RS11945 a0de2a6a74b4128dddc5bc89c77b6413 116 SUPERFAMILY SSF46973 14 113 5.36E-34 T 09-03-2017 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 RG43_RS11945 a0de2a6a74b4128dddc5bc89c77b6413 116 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 19 112 2.0E-32 T 09-03-2017 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 RG43_RS11945 a0de2a6a74b4128dddc5bc89c77b6413 116 TIGRFAM TIGR00823 EIIA-LAC: PTS system, lactose-specific IIa component 15 113 1.6E-41 T 09-03-2017 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 RG43_RS11945 a0de2a6a74b4128dddc5bc89c77b6413 116 PIRSF PIRSF000699 10 116 6.3E-41 T 09-03-2017 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 RG43_RS11945 a0de2a6a74b4128dddc5bc89c77b6413 116 Gene3D G3DSA:1.20.58.80 14 115 7.6E-42 T 09-03-2017 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 RG43_RS25045 f5b871ad11bd954b6ec26b9671be6302 300 SUPERFAMILY SSF101852 189 293 1.57E-25 T 09-03-2017 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal RG43_RS25045 f5b871ad11bd954b6ec26b9671be6302 300 SUPERFAMILY SSF102522 23 179 2.22E-56 T 09-03-2017 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal RG43_RS25045 f5b871ad11bd954b6ec26b9671be6302 300 Pfam PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase 26 290 6.6E-74 T 09-03-2017 IPR002747 SAM-dependent chlorinase/fluorinase RG43_RS25045 f5b871ad11bd954b6ec26b9671be6302 300 Gene3D G3DSA:2.40.30.90 186 294 5.8E-29 T 09-03-2017 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal RG43_RS25045 f5b871ad11bd954b6ec26b9671be6302 300 PIRSF PIRSF006779 20 296 8.2E-106 T 09-03-2017 IPR002747 SAM-dependent chlorinase/fluorinase RG43_RS15350 564233cc09f9d1c7cf9967ffcf8472f6 177 SUPERFAMILY SSF52949 3 172 3.7E-64 T 09-03-2017 RG43_RS15350 564233cc09f9d1c7cf9967ffcf8472f6 177 Pfam PF01661 Macro domain 21 137 1.1E-41 T 09-03-2017 IPR002589 Macro domain RG43_RS15350 564233cc09f9d1c7cf9967ffcf8472f6 177 Hamap MF_01205 O-acetyl-ADP-ribose deacetylase [ymdB]. 2 172 48.2 T 09-03-2017 IPR024900 O-acetyl-ADP-ribose deacetylase RG43_RS15350 564233cc09f9d1c7cf9967ffcf8472f6 177 SMART SM00506 4 137 3.5E-58 T 09-03-2017 IPR002589 Macro domain RG43_RS15350 564233cc09f9d1c7cf9967ffcf8472f6 177 Gene3D G3DSA:3.40.220.10 3 174 1.9E-70 T 09-03-2017 RG43_RS14960 d201ebc06b3dbbf11a78039edcfa180e 320 SMART SM00257 45 91 2.9E-7 T 09-03-2017 IPR018392 LysM domain RG43_RS14960 d201ebc06b3dbbf11a78039edcfa180e 320 SUPERFAMILY SSF141523 101 240 3.14E-28 T 09-03-2017 RG43_RS14960 d201ebc06b3dbbf11a78039edcfa180e 320 Pfam PF01476 LysM domain 47 91 8.9E-7 T 09-03-2017 IPR018392 LysM domain RG43_RS14960 d201ebc06b3dbbf11a78039edcfa180e 320 Gene3D G3DSA:3.10.350.10 53 91 1.2E-6 T 09-03-2017 IPR018392 LysM domain RG43_RS14960 d201ebc06b3dbbf11a78039edcfa180e 320 Pfam PF03734 L,D-transpeptidase catalytic domain 103 240 1.9E-19 T 09-03-2017 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 RG43_RS14960 d201ebc06b3dbbf11a78039edcfa180e 320 Gene3D G3DSA:2.40.440.10 96 242 3.3E-34 T 09-03-2017 RG43_RS08715 a5f33733794e00fbbeda3928223d15eb 354 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 270 348 5.3E-32 T 09-03-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 RG43_RS08715 a5f33733794e00fbbeda3928223d15eb 354 Gene3D G3DSA:3.30.160.70 175 267 3.6E-34 T 09-03-2017 RG43_RS08715 a5f33733794e00fbbeda3928223d15eb 354 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 319 325 - T 09-03-2017 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 RG43_RS08715 a5f33733794e00fbbeda3928223d15eb 354 Gene3D G3DSA:1.10.10.10 268 349 5.5E-34 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS08715 a5f33733794e00fbbeda3928223d15eb 354 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 86 128 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RG43_RS08715 a5f33733794e00fbbeda3928223d15eb 354 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 189 266 1.9E-21 T 09-03-2017 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 RG43_RS08715 a5f33733794e00fbbeda3928223d15eb 354 SUPERFAMILY SSF46767 268 348 1.57E-30 T 09-03-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 RG43_RS08715 a5f33733794e00fbbeda3928223d15eb 354 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 136 177 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RG43_RS08715 a5f33733794e00fbbeda3928223d15eb 354 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 269 348 1.0E-37 T 09-03-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 RG43_RS08715 a5f33733794e00fbbeda3928223d15eb 354 SUPERFAMILY SSF57884 2 92 1.57E-34 T 09-03-2017 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 RG43_RS08715 a5f33733794e00fbbeda3928223d15eb 354 PIRSF PIRSF000409 1 354 7.9E-146 T 09-03-2017 IPR016221 Bifunctional regulatory protein Ada RG43_RS08715 a5f33733794e00fbbeda3928223d15eb 354 Pfam PF02805 Metal binding domain of Ada 11 75 4.1E-32 T 09-03-2017 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 RG43_RS08715 a5f33733794e00fbbeda3928223d15eb 354 SMART SM00342 99 181 5.0E-22 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS08715 a5f33733794e00fbbeda3928223d15eb 354 SUPERFAMILY SSF46689 85 133 1.39E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS08715 a5f33733794e00fbbeda3928223d15eb 354 SUPERFAMILY SSF53155 187 267 8.24E-21 T 09-03-2017 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 RG43_RS08715 a5f33733794e00fbbeda3928223d15eb 354 Gene3D G3DSA:1.10.10.60 87 139 3.1E-24 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS08715 a5f33733794e00fbbeda3928223d15eb 354 Gene3D G3DSA:3.40.10.10 3 86 8.4E-37 T 09-03-2017 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 RG43_RS08715 a5f33733794e00fbbeda3928223d15eb 354 Pfam PF12833 Helix-turn-helix domain 105 181 9.1E-17 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS07135 faf6c0209a96fd32e79e56c86c191611 171 Gene3D G3DSA:1.10.287.110 1 78 3.8E-27 T 09-03-2017 IPR001623 DnaJ domain RG43_RS07135 faf6c0209a96fd32e79e56c86c191611 171 SMART SM00271 1 66 7.9E-9 T 09-03-2017 IPR001623 DnaJ domain RG43_RS07135 faf6c0209a96fd32e79e56c86c191611 171 SUPERFAMILY SSF47144 77 170 7.06E-26 T 09-03-2017 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020 RG43_RS07135 faf6c0209a96fd32e79e56c86c191611 171 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 168 1.7E-68 T 09-03-2017 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 Reactome: R-HSA-1268020 RG43_RS07135 faf6c0209a96fd32e79e56c86c191611 171 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 169 25.025 T 09-03-2017 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 Reactome: R-HSA-1268020 RG43_RS07135 faf6c0209a96fd32e79e56c86c191611 171 SUPERFAMILY SSF46565 1 75 9.03E-18 T 09-03-2017 IPR001623 DnaJ domain RG43_RS07135 faf6c0209a96fd32e79e56c86c191611 171 Pfam PF07743 HSCB C-terminal oligomerisation domain 88 161 1.1E-17 T 09-03-2017 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020 RG43_RS07135 faf6c0209a96fd32e79e56c86c191611 171 Gene3D G3DSA:1.20.1280.20 81 170 1.0E-31 T 09-03-2017 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020 RG43_RS15955 fffda73acc6a96bb77e8a1e15ff27caa 615 Gene3D G3DSA:1.10.101.10 234 271 1.9E-22 T 09-03-2017 IPR002477 Peptidoglycan binding-like RG43_RS15955 fffda73acc6a96bb77e8a1e15ff27caa 615 Gene3D G3DSA:1.10.101.10 314 357 1.9E-22 T 09-03-2017 IPR002477 Peptidoglycan binding-like RG43_RS15955 fffda73acc6a96bb77e8a1e15ff27caa 615 Pfam PF01471 Putative peptidoglycan binding domain 316 348 6.8E-7 T 09-03-2017 IPR002477 Peptidoglycan binding-like RG43_RS15955 fffda73acc6a96bb77e8a1e15ff27caa 615 SUPERFAMILY SSF47090 234 269 8.63E-12 T 09-03-2017 IPR002477 Peptidoglycan binding-like RG43_RS15955 fffda73acc6a96bb77e8a1e15ff27caa 615 SUPERFAMILY SSF47090 314 356 8.63E-12 T 09-03-2017 IPR002477 Peptidoglycan binding-like RG43_RS15955 fffda73acc6a96bb77e8a1e15ff27caa 615 Pfam PF03734 L,D-transpeptidase catalytic domain 377 543 6.7E-31 T 09-03-2017 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 RG43_RS15955 fffda73acc6a96bb77e8a1e15ff27caa 615 Gene3D G3DSA:2.40.440.10 486 534 1.5E-14 T 09-03-2017 RG43_RS15955 fffda73acc6a96bb77e8a1e15ff27caa 615 Gene3D G3DSA:2.40.440.10 370 419 1.5E-14 T 09-03-2017 RG43_RS15955 fffda73acc6a96bb77e8a1e15ff27caa 615 SUPERFAMILY SSF141523 375 428 1.19E-20 T 09-03-2017 RG43_RS15955 fffda73acc6a96bb77e8a1e15ff27caa 615 SUPERFAMILY SSF141523 484 533 1.19E-20 T 09-03-2017 RG43_RS25440 526f66682c83db01225b83db17fb2c82 271 SUPERFAMILY SSF81336 95 265 7.32E-50 T 09-03-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 RG43_RS25440 526f66682c83db01225b83db17fb2c82 271 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 38 266 3.1E-43 T 09-03-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 RG43_RS25440 526f66682c83db01225b83db17fb2c82 271 PRINTS PR00123 ATP synthase A subunit signature 104 120 3.2E-15 T 09-03-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 RG43_RS25440 526f66682c83db01225b83db17fb2c82 271 PRINTS PR00123 ATP synthase A subunit signature 203 225 3.2E-15 T 09-03-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 RG43_RS25440 526f66682c83db01225b83db17fb2c82 271 PRINTS PR00123 ATP synthase A subunit signature 251 266 3.2E-15 T 09-03-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 RG43_RS25440 526f66682c83db01225b83db17fb2c82 271 Gene3D G3DSA:1.20.120.220 96 271 9.9E-59 T 09-03-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 RG43_RS25440 526f66682c83db01225b83db17fb2c82 271 Pfam PF00119 ATP synthase A chain 46 265 7.1E-56 T 09-03-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 RG43_RS25440 526f66682c83db01225b83db17fb2c82 271 ProSitePatterns PS00449 ATP synthase a subunit signature. 206 215 - T 09-03-2017 IPR023011 ATPase, F0 complex, subunit A, active site Reactome: R-HSA-163210 RG43_RS25440 526f66682c83db01225b83db17fb2c82 271 Hamap MF_01393 ATP synthase subunit a [atpB]. 12 271 16.155 T 09-03-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 RG43_RS20490 3b069cd7d2da0aa34b6210e6de804a4b 190 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 7 155 1.1E-38 T 09-03-2017 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 RG43_RS20490 3b069cd7d2da0aa34b6210e6de804a4b 190 PIRSF PIRSF004682 1 189 2.0E-67 T 09-03-2017 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 RG43_RS20490 3b069cd7d2da0aa34b6210e6de804a4b 190 Gene3D G3DSA:3.40.50.1000 3 183 3.9E-63 T 09-03-2017 IPR023214 HAD-like domain RG43_RS20490 3b069cd7d2da0aa34b6210e6de804a4b 190 Pfam PF13242 HAD-hyrolase-like 109 179 1.9E-12 T 09-03-2017 RG43_RS20490 3b069cd7d2da0aa34b6210e6de804a4b 190 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 154 2.5E-38 T 09-03-2017 IPR006543 Histidinol-phosphate phosphatase GO:0016791 RG43_RS20490 3b069cd7d2da0aa34b6210e6de804a4b 190 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 6 181 3.3E-101 T 09-03-2017 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 RG43_RS20490 3b069cd7d2da0aa34b6210e6de804a4b 190 SUPERFAMILY SSF56784 5 184 2.62E-53 T 09-03-2017 IPR023214 HAD-like domain RG43_RS02390 159e6ede332e7763b3b56f0b925339f5 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 6.9E-59 T 09-03-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS02390 159e6ede332e7763b3b56f0b925339f5 136 Gene3D G3DSA:3.90.1170.10 22 133 8.3E-53 T 09-03-2017 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 RG43_RS02390 159e6ede332e7763b3b56f0b925339f5 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 09-03-2017 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS02390 159e6ede332e7763b3b56f0b925339f5 136 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 81 92 - T 09-03-2017 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS02390 159e6ede332e7763b3b56f0b925339f5 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 38.018 T 09-03-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS02390 159e6ede332e7763b3b56f0b925339f5 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 6.4E-47 T 09-03-2017 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 RG43_RS02390 159e6ede332e7763b3b56f0b925339f5 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 2.4E-40 T 09-03-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS02390 159e6ede332e7763b3b56f0b925339f5 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 2.4E-40 T 09-03-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS02390 159e6ede332e7763b3b56f0b925339f5 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 2.4E-40 T 09-03-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS02390 159e6ede332e7763b3b56f0b925339f5 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 2.4E-40 T 09-03-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS02390 159e6ede332e7763b3b56f0b925339f5 136 SUPERFAMILY SSF54686 3 133 9.16E-55 T 09-03-2017 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 RG43_RS10125 e7bcf29ce39f635ca95eb5a76ffeb3fa 238 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 2 235 2.0E-65 T 09-03-2017 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RG43_RS10125 e7bcf29ce39f635ca95eb5a76ffeb3fa 238 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 237 30.11 T 09-03-2017 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RG43_RS10125 e7bcf29ce39f635ca95eb5a76ffeb3fa 238 Gene3D G3DSA:1.10.10.200 2 77 4.8E-28 T 09-03-2017 IPR017856 Integrase, N-terminal zinc-binding domain-like RG43_RS10125 e7bcf29ce39f635ca95eb5a76ffeb3fa 238 Gene3D G3DSA:3.30.1270.10 210 236 5.3E-33 T 09-03-2017 IPR026563 Transcriptional regulator TACO1-like, domain 2 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RG43_RS10125 e7bcf29ce39f635ca95eb5a76ffeb3fa 238 Gene3D G3DSA:3.30.1270.10 82 131 5.3E-33 T 09-03-2017 IPR026563 Transcriptional regulator TACO1-like, domain 2 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RG43_RS10125 e7bcf29ce39f635ca95eb5a76ffeb3fa 238 Hamap MF_00918 Probable transcriptional regulatory protein YeeN [yeeN]. 1 238 56.792 T 09-03-2017 IPR026562 Probable transcriptional regulatory protein YeeN RG43_RS10125 e7bcf29ce39f635ca95eb5a76ffeb3fa 238 Pfam PF01709 Transcriptional regulator 4 235 7.1E-78 T 09-03-2017 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RG43_RS10125 e7bcf29ce39f635ca95eb5a76ffeb3fa 238 Gene3D G3DSA:3.30.70.980 132 202 6.6E-22 T 09-03-2017 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RG43_RS10125 e7bcf29ce39f635ca95eb5a76ffeb3fa 238 SUPERFAMILY SSF75625 2 235 3.4E-77 T 09-03-2017 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RG43_RS27920 e5a3143610063638c2e8c80e35df4b7e 513 Pfam PF05658 Head domain of trimeric autotransporter adhesin 322 348 1.3E-7 T 09-03-2017 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 RG43_RS27920 e5a3143610063638c2e8c80e35df4b7e 513 Pfam PF05658 Head domain of trimeric autotransporter adhesin 482 508 1.3E-4 T 09-03-2017 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 RG43_RS27920 e5a3143610063638c2e8c80e35df4b7e 513 Gene3D G3DSA:2.150.10.10 41 80 8.9E-6 T 09-03-2017 IPR011049 Serralysin-like metalloprotease, C-terminal RG43_RS27920 e5a3143610063638c2e8c80e35df4b7e 513 Gene3D G3DSA:2.150.10.10 314 428 1.9E-18 T 09-03-2017 IPR011049 Serralysin-like metalloprotease, C-terminal RG43_RS27920 e5a3143610063638c2e8c80e35df4b7e 513 Gene3D G3DSA:2.150.10.10 445 511 5.1E-7 T 09-03-2017 IPR011049 Serralysin-like metalloprotease, C-terminal RG43_RS27920 e5a3143610063638c2e8c80e35df4b7e 513 Gene3D G3DSA:2.150.10.10 187 262 6.5E-6 T 09-03-2017 IPR011049 Serralysin-like metalloprotease, C-terminal RG43_RS27920 e5a3143610063638c2e8c80e35df4b7e 513 Gene3D G3DSA:2.150.10.10 118 181 6.1E-5 T 09-03-2017 IPR011049 Serralysin-like metalloprotease, C-terminal RG43_RS27920 e5a3143610063638c2e8c80e35df4b7e 513 SUPERFAMILY SSF101967 19 80 1.19E-6 T 09-03-2017 RG43_RS27920 e5a3143610063638c2e8c80e35df4b7e 513 SUPERFAMILY SSF101967 89 275 4.84E-9 T 09-03-2017 RG43_RS27920 e5a3143610063638c2e8c80e35df4b7e 513 Gene3D G3DSA:1.20.5.170 263 313 3.2E-9 T 09-03-2017 RG43_RS27920 e5a3143610063638c2e8c80e35df4b7e 513 SUPERFAMILY SSF101967 304 429 4.05E-17 T 09-03-2017 RG43_RS27920 e5a3143610063638c2e8c80e35df4b7e 513 SUPERFAMILY SSF101967 446 511 1.31E-8 T 09-03-2017 RG43_RS27920 e5a3143610063638c2e8c80e35df4b7e 513 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 251 272 5.7E-9 T 09-03-2017 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 RG43_RS27920 e5a3143610063638c2e8c80e35df4b7e 513 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 156 177 7.2E-7 T 09-03-2017 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 RG43_RS27920 e5a3143610063638c2e8c80e35df4b7e 513 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 406 426 4.4E-7 T 09-03-2017 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 RG43_RS27920 e5a3143610063638c2e8c80e35df4b7e 513 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 56 77 8.7E-8 T 09-03-2017 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 RG43_RS05740 e144233d532bb560db8e0378fa99de0e 512 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 89 508 2.1E-167 T 09-03-2017 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath RG43_RS05740 e144233d532bb560db8e0378fa99de0e 512 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 46 508 3.3E-200 T 09-03-2017 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath RG43_RS18745 7080dccb18e3bd970d366771fc029ffc 593 ProSitePatterns PS00211 ABC transporters family signature. 477 491 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS18745 7080dccb18e3bd970d366771fc029ffc 593 SMART SM00382 366 557 5.0E-15 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS18745 7080dccb18e3bd970d366771fc029ffc 593 Pfam PF00005 ABC transporter 357 505 2.7E-30 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS18745 7080dccb18e3bd970d366771fc029ffc 593 SUPERFAMILY SSF90123 12 325 2.35E-70 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RG43_RS18745 7080dccb18e3bd970d366771fc029ffc 593 Gene3D G3DSA:1.20.1560.10 12 325 3.7E-77 T 09-03-2017 RG43_RS18745 7080dccb18e3bd970d366771fc029ffc 593 Gene3D G3DSA:3.40.50.300 341 580 2.0E-70 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS18745 7080dccb18e3bd970d366771fc029ffc 593 SUPERFAMILY SSF52540 336 576 2.27E-78 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS18745 7080dccb18e3bd970d366771fc029ffc 593 Pfam PF00664 ABC transporter transmembrane region 26 295 1.4E-41 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RG43_RS00725 3b71aebc857797f6b97324e944b78985 69 Gene3D G3DSA:1.20.58.250 15 63 3.0E-10 T 09-03-2017 IPR011326 Homologue of theta DNA polymerase III RG43_RS03115 3e03ed8d35ddb858f919fa9b04e5a497 495 Gene3D G3DSA:3.30.300.20 278 346 5.3E-26 T 09-03-2017 IPR015946 K homology domain-like, alpha/beta RG43_RS03115 3e03ed8d35ddb858f919fa9b04e5a497 495 Gene3D G3DSA:3.30.300.20 199 277 2.4E-34 T 09-03-2017 IPR015946 K homology domain-like, alpha/beta RG43_RS03115 3e03ed8d35ddb858f919fa9b04e5a497 495 SUPERFAMILY SSF47794 355 414 3.61E-17 T 09-03-2017 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 RG43_RS03115 3e03ed8d35ddb858f919fa9b04e5a497 495 SUPERFAMILY SSF69705 1 126 1.96E-41 T 09-03-2017 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 RG43_RS03115 3e03ed8d35ddb858f919fa9b04e5a497 495 SUPERFAMILY SSF50249 132 199 2.03E-17 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS03115 3e03ed8d35ddb858f919fa9b04e5a497 495 SUPERFAMILY SSF54814 201 278 3.73E-29 T 09-03-2017 IPR009019 K homology domain, prokaryotic type GO:0003723 RG43_RS03115 3e03ed8d35ddb858f919fa9b04e5a497 495 Gene3D G3DSA:3.30.1480.10 1 124 1.0E-46 T 09-03-2017 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 RG43_RS03115 3e03ed8d35ddb858f919fa9b04e5a497 495 Pfam PF08529 NusA N-terminal domain 4 123 1.6E-37 T 09-03-2017 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 RG43_RS03115 3e03ed8d35ddb858f919fa9b04e5a497 495 Gene3D G3DSA:1.10.150.20 431 492 4.4E-25 T 09-03-2017 RG43_RS03115 3e03ed8d35ddb858f919fa9b04e5a497 495 Pfam PF00575 S1 RNA binding domain 134 195 1.6E-4 T 09-03-2017 IPR003029 S1 domain GO:0003676 RG43_RS03115 3e03ed8d35ddb858f919fa9b04e5a497 495 Pfam PF13184 NusA-like KH domain 230 297 2.1E-27 T 09-03-2017 IPR025249 KH domain, NusA-like GO:0003723 RG43_RS03115 3e03ed8d35ddb858f919fa9b04e5a497 495 Gene3D G3DSA:1.10.150.20 357 414 4.1E-23 T 09-03-2017 RG43_RS03115 3e03ed8d35ddb858f919fa9b04e5a497 495 SUPERFAMILY SSF47794 429 492 9.58E-18 T 09-03-2017 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 RG43_RS03115 3e03ed8d35ddb858f919fa9b04e5a497 495 Gene3D G3DSA:2.40.50.140 128 197 3.0E-24 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS03115 3e03ed8d35ddb858f919fa9b04e5a497 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 1.7E-130 T 09-03-2017 IPR010213 Transcription termination factor NusA GO:0003723 RG43_RS03115 3e03ed8d35ddb858f919fa9b04e5a497 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 410 29.272 T 09-03-2017 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 RG43_RS03115 3e03ed8d35ddb858f919fa9b04e5a497 495 SUPERFAMILY SSF54814 279 343 3.18E-15 T 09-03-2017 IPR009019 K homology domain, prokaryotic type GO:0003723 RG43_RS03115 3e03ed8d35ddb858f919fa9b04e5a497 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 440 489 1.2E-18 T 09-03-2017 IPR010214 Transcription termination factor NusA, C-terminal duplication RG43_RS03115 3e03ed8d35ddb858f919fa9b04e5a497 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 4.0E-21 T 09-03-2017 IPR010214 Transcription termination factor NusA, C-terminal duplication RG43_RS03115 3e03ed8d35ddb858f919fa9b04e5a497 495 SMART SM00316 133 200 7.7E-9 T 09-03-2017 IPR022967 RNA-binding domain, S1 RG43_RS03115 3e03ed8d35ddb858f919fa9b04e5a497 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 2.2E-9 T 09-03-2017 RG43_RS05200 3717bd7ab503d25bbe3ebf6dbc73ec6e 410 Gene3D G3DSA:3.40.50.720 8 120 2.5E-36 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS05200 3717bd7ab503d25bbe3ebf6dbc73ec6e 410 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 09-03-2017 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RG43_RS05200 3717bd7ab503d25bbe3ebf6dbc73ec6e 410 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 326 1.1E-38 T 09-03-2017 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 RG43_RS05200 3717bd7ab503d25bbe3ebf6dbc73ec6e 410 SUPERFAMILY SSF51735 108 295 6.77E-58 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS05200 3717bd7ab503d25bbe3ebf6dbc73ec6e 410 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 09-03-2017 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RG43_RS05200 3717bd7ab503d25bbe3ebf6dbc73ec6e 410 Pfam PF01842 ACT domain 345 401 5.2E-7 T 09-03-2017 IPR002912 ACT domain GO:0008152|GO:0016597 RG43_RS05200 3717bd7ab503d25bbe3ebf6dbc73ec6e 410 Gene3D G3DSA:3.40.50.720 121 297 3.0E-61 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS05200 3717bd7ab503d25bbe3ebf6dbc73ec6e 410 Gene3D G3DSA:3.30.70.260 324 409 1.1E-28 T 09-03-2017 RG43_RS05200 3717bd7ab503d25bbe3ebf6dbc73ec6e 410 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 3.1E-50 T 09-03-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RG43_RS05200 3717bd7ab503d25bbe3ebf6dbc73ec6e 410 SUPERFAMILY SSF55021 328 409 1.15E-20 T 09-03-2017 RG43_RS05200 3717bd7ab503d25bbe3ebf6dbc73ec6e 410 SUPERFAMILY SSF52283 7 138 1.79E-50 T 09-03-2017 RG43_RS05200 3717bd7ab503d25bbe3ebf6dbc73ec6e 410 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 09-03-2017 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RG43_RS16125 1b8f312befa2a16b4cd39723018054e6 447 Gene3D G3DSA:1.10.3710.10 348 444 2.2E-34 T 09-03-2017 RG43_RS16125 1b8f312befa2a16b4cd39723018054e6 447 Gene3D G3DSA:1.10.8.60 154 228 1.6E-8 T 09-03-2017 RG43_RS16125 1b8f312befa2a16b4cd39723018054e6 447 Pfam PF12002 MgsA AAA+ ATPase C terminal 268 434 3.1E-64 T 09-03-2017 IPR021886 MgsA AAA+ ATPase C-terminal RG43_RS16125 1b8f312befa2a16b4cd39723018054e6 447 SUPERFAMILY SSF48019 252 434 6.23E-71 T 09-03-2017 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 RG43_RS16125 1b8f312befa2a16b4cd39723018054e6 447 Pfam PF16193 AAA C-terminal domain 188 267 5.5E-22 T 09-03-2017 IPR032423 AAA ATPase, C-terminal domain RG43_RS16125 1b8f312befa2a16b4cd39723018054e6 447 SUPERFAMILY SSF52540 6 234 1.53E-47 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16125 1b8f312befa2a16b4cd39723018054e6 447 Gene3D G3DSA:3.40.50.300 11 153 1.0E-33 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16125 1b8f312befa2a16b4cd39723018054e6 447 SMART SM00382 49 165 2.6E-18 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS16125 1b8f312befa2a16b4cd39723018054e6 447 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 159 4.7E-17 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 RG43_RS16125 1b8f312befa2a16b4cd39723018054e6 447 Gene3D G3DSA:1.20.272.10 249 347 3.1E-42 T 09-03-2017 RG43_RS10735 847cf28e03471d6cc5f43a9cc3cfc072 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 247 267 2.3E-75 T 09-03-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 RG43_RS10735 847cf28e03471d6cc5f43a9cc3cfc072 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 271 297 2.3E-75 T 09-03-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 RG43_RS10735 847cf28e03471d6cc5f43a9cc3cfc072 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 33 59 2.3E-75 T 09-03-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 RG43_RS10735 847cf28e03471d6cc5f43a9cc3cfc072 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 114 137 2.3E-75 T 09-03-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 RG43_RS10735 847cf28e03471d6cc5f43a9cc3cfc072 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 225 245 2.3E-75 T 09-03-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 RG43_RS10735 847cf28e03471d6cc5f43a9cc3cfc072 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 4 20 2.3E-75 T 09-03-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 RG43_RS10735 847cf28e03471d6cc5f43a9cc3cfc072 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 194 219 2.3E-75 T 09-03-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 RG43_RS10735 847cf28e03471d6cc5f43a9cc3cfc072 331 SUPERFAMILY SSF48029 5 104 2.62E-18 T 09-03-2017 IPR011002 Flagellar motor switch protein FliG, alpha-helical RG43_RS10735 847cf28e03471d6cc5f43a9cc3cfc072 331 Gene3D G3DSA:1.10.220.30 194 330 1.7E-40 T 09-03-2017 IPR011002 Flagellar motor switch protein FliG, alpha-helical RG43_RS10735 847cf28e03471d6cc5f43a9cc3cfc072 331 Gene3D G3DSA:1.10.220.30 74 183 3.3E-28 T 09-03-2017 IPR011002 Flagellar motor switch protein FliG, alpha-helical RG43_RS10735 847cf28e03471d6cc5f43a9cc3cfc072 331 Pfam PF14842 FliG N-terminal domain 3 103 1.5E-29 T 09-03-2017 IPR028263 Flagellar motor switch protein FliG, N-terminal domain RG43_RS10735 847cf28e03471d6cc5f43a9cc3cfc072 331 PIRSF PIRSF003161 1 331 1.4E-118 T 09-03-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 RG43_RS10735 847cf28e03471d6cc5f43a9cc3cfc072 331 Gene3D G3DSA:1.10.220.30 8 71 7.2E-15 T 09-03-2017 IPR011002 Flagellar motor switch protein FliG, alpha-helical RG43_RS10735 847cf28e03471d6cc5f43a9cc3cfc072 331 Pfam PF14841 FliG middle domain 115 186 3.0E-24 T 09-03-2017 IPR032779 Flagellar motor switch protein FliG, middle domain RG43_RS10735 847cf28e03471d6cc5f43a9cc3cfc072 331 SUPERFAMILY SSF48029 115 324 7.32E-63 T 09-03-2017 IPR011002 Flagellar motor switch protein FliG, alpha-helical RG43_RS10735 847cf28e03471d6cc5f43a9cc3cfc072 331 Pfam PF01706 FliG C-terminal domain 218 323 1.4E-37 T 09-03-2017 IPR023087 Flagellar motor switch protein FliG, C-terminal RG43_RS10735 847cf28e03471d6cc5f43a9cc3cfc072 331 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 1 331 3.4E-153 T 09-03-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 RG43_RS24705 29bfaafb8cfe44022c7cfa6e5231e04a 928 Gene3D G3DSA:1.10.150.20 712 818 5.0E-37 T 09-03-2017 RG43_RS24705 29bfaafb8cfe44022c7cfa6e5231e04a 928 ProSitePatterns PS00447 DNA polymerase family A signature. 754 773 - T 09-03-2017 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS24705 29bfaafb8cfe44022c7cfa6e5231e04a 928 SMART SM00474 330 517 3.1E-49 T 09-03-2017 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 RG43_RS24705 29bfaafb8cfe44022c7cfa6e5231e04a 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 845 861 1.6E-80 T 09-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS24705 29bfaafb8cfe44022c7cfa6e5231e04a 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 813 824 1.6E-80 T 09-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS24705 29bfaafb8cfe44022c7cfa6e5231e04a 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 700 723 1.6E-80 T 09-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS24705 29bfaafb8cfe44022c7cfa6e5231e04a 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 655 677 1.6E-80 T 09-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS24705 29bfaafb8cfe44022c7cfa6e5231e04a 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 791 802 1.6E-80 T 09-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS24705 29bfaafb8cfe44022c7cfa6e5231e04a 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 754 779 1.6E-80 T 09-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS24705 29bfaafb8cfe44022c7cfa6e5231e04a 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 678 693 1.6E-80 T 09-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS24705 29bfaafb8cfe44022c7cfa6e5231e04a 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 730 743 1.6E-80 T 09-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS24705 29bfaafb8cfe44022c7cfa6e5231e04a 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 875 888 1.6E-80 T 09-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS24705 29bfaafb8cfe44022c7cfa6e5231e04a 928 SMART SM00279 173 208 1.2E-13 T 09-03-2017 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 RG43_RS24705 29bfaafb8cfe44022c7cfa6e5231e04a 928 Gene3D G3DSA:3.30.70.370 664 711 4.5E-70 T 09-03-2017 RG43_RS24705 29bfaafb8cfe44022c7cfa6e5231e04a 928 Gene3D G3DSA:3.30.70.370 819 928 4.5E-70 T 09-03-2017 RG43_RS24705 29bfaafb8cfe44022c7cfa6e5231e04a 928 SUPERFAMILY SSF56672 523 928 1.11E-164 T 09-03-2017 RG43_RS24705 29bfaafb8cfe44022c7cfa6e5231e04a 928 SUPERFAMILY SSF53098 326 518 8.07E-57 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS24705 29bfaafb8cfe44022c7cfa6e5231e04a 928 Gene3D G3DSA:3.40.50.1010 8 186 1.1E-73 T 09-03-2017 IPR029060 PIN domain-like RG43_RS24705 29bfaafb8cfe44022c7cfa6e5231e04a 928 Pfam PF00476 DNA polymerase family A 551 925 1.3E-161 T 09-03-2017 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS24705 29bfaafb8cfe44022c7cfa6e5231e04a 928 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 271 1.9E-30 T 09-03-2017 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 RG43_RS24705 29bfaafb8cfe44022c7cfa6e5231e04a 928 Pfam PF01612 3'-5' exonuclease 330 517 3.8E-46 T 09-03-2017 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 RG43_RS24705 29bfaafb8cfe44022c7cfa6e5231e04a 928 SMART SM00482 686 892 2.7E-128 T 09-03-2017 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS24705 29bfaafb8cfe44022c7cfa6e5231e04a 928 SUPERFAMILY SSF47807 171 291 1.03E-29 T 09-03-2017 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 RG43_RS24705 29bfaafb8cfe44022c7cfa6e5231e04a 928 Gene3D G3DSA:1.20.1060.10 543 663 4.2E-37 T 09-03-2017 RG43_RS24705 29bfaafb8cfe44022c7cfa6e5231e04a 928 SMART SM00475 7 268 1.4E-145 T 09-03-2017 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 RG43_RS24705 29bfaafb8cfe44022c7cfa6e5231e04a 928 TIGRFAM TIGR00593 pola: DNA polymerase I 9 928 4.8E-290 T 09-03-2017 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS24705 29bfaafb8cfe44022c7cfa6e5231e04a 928 SUPERFAMILY SSF88723 7 170 4.21E-57 T 09-03-2017 IPR029060 PIN domain-like RG43_RS24705 29bfaafb8cfe44022c7cfa6e5231e04a 928 Gene3D G3DSA:1.10.150.20 187 253 4.7E-25 T 09-03-2017 RG43_RS24705 29bfaafb8cfe44022c7cfa6e5231e04a 928 Gene3D G3DSA:3.30.420.10 329 542 1.7E-88 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS24705 29bfaafb8cfe44022c7cfa6e5231e04a 928 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 2.9E-55 T 09-03-2017 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 RG43_RS02225 c43be483346ab64b86ac46b5009ec176 270 Gene3D G3DSA:3.10.50.40 135 249 2.3E-45 T 09-03-2017 RG43_RS02225 c43be483346ab64b86ac46b5009ec176 270 Gene3D G3DSA:1.10.287.460 30 134 9.9E-45 T 09-03-2017 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 RG43_RS02225 c43be483346ab64b86ac46b5009ec176 270 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 33 152 1.1E-36 T 09-03-2017 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 RG43_RS02225 c43be483346ab64b86ac46b5009ec176 270 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 159 246 8.7E-29 T 09-03-2017 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 RG43_RS02225 c43be483346ab64b86ac46b5009ec176 270 SUPERFAMILY SSF54534 41 249 2.36E-65 T 09-03-2017 RG43_RS00615 ac142ede11739f7e182238d66718235a 319 Gene3D G3DSA:3.40.50.2000 1 159 1.1E-32 T 09-03-2017 RG43_RS00615 ac142ede11739f7e182238d66718235a 319 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 76 313 2.4E-79 T 09-03-2017 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 RG43_RS00615 ac142ede11739f7e182238d66718235a 319 SUPERFAMILY SSF53756 1 316 8.16E-73 T 09-03-2017 RG43_RS00615 ac142ede11739f7e182238d66718235a 319 Gene3D G3DSA:3.40.50.2000 165 313 3.2E-36 T 09-03-2017 RG43_RS00615 ac142ede11739f7e182238d66718235a 319 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 2 316 7.5E-130 T 09-03-2017 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 RG43_RS00985 6e9bfccea596b3ffd13b3a813255b9fb 777 Pfam PF00384 Molybdopterin oxidoreductase 56 517 2.1E-111 T 09-03-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS00985 6e9bfccea596b3ffd13b3a813255b9fb 777 Gene3D G3DSA:3.40.50.740 48 150 4.2E-45 T 09-03-2017 RG43_RS00985 6e9bfccea596b3ffd13b3a813255b9fb 777 Gene3D G3DSA:3.40.50.740 365 460 4.2E-45 T 09-03-2017 RG43_RS00985 6e9bfccea596b3ffd13b3a813255b9fb 777 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 675 702 - T 09-03-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 RG43_RS00985 6e9bfccea596b3ffd13b3a813255b9fb 777 Gene3D G3DSA:3.40.228.10 155 364 5.0E-62 T 09-03-2017 RG43_RS00985 6e9bfccea596b3ffd13b3a813255b9fb 777 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 459 476 - T 09-03-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 RG43_RS00985 6e9bfccea596b3ffd13b3a813255b9fb 777 SUPERFAMILY SSF53706 14 633 1.26E-161 T 09-03-2017 RG43_RS00985 6e9bfccea596b3ffd13b3a813255b9fb 777 SUPERFAMILY SSF50692 631 774 3.84E-38 T 09-03-2017 IPR009010 Aspartate decarboxylase-like domain RG43_RS00985 6e9bfccea596b3ffd13b3a813255b9fb 777 Gene3D G3DSA:3.90.55.10 461 567 2.6E-34 T 09-03-2017 RG43_RS00985 6e9bfccea596b3ffd13b3a813255b9fb 777 Pfam PF01568 Molydopterin dinucleotide binding domain 637 740 4.3E-24 T 09-03-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RG43_RS00985 6e9bfccea596b3ffd13b3a813255b9fb 777 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 13 775 0.0 T 09-03-2017 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 RG43_RS00985 6e9bfccea596b3ffd13b3a813255b9fb 777 Gene3D G3DSA:2.40.40.20 612 770 4.2E-54 T 09-03-2017 RG43_RS16035 3a715b3d0635089e27f33e920bee8f54 557 PIRSF PIRSF002111 1 534 2.7E-221 T 09-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RG43_RS16035 3a715b3d0635089e27f33e920bee8f54 557 SUPERFAMILY SSF50249 106 185 3.43E-14 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS16035 3a715b3d0635089e27f33e920bee8f54 557 SUPERFAMILY SSF50249 189 277 3.88E-27 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS16035 3a715b3d0635089e27f33e920bee8f54 557 Gene3D G3DSA:2.40.50.140 102 172 5.5E-15 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS16035 3a715b3d0635089e27f33e920bee8f54 557 Gene3D G3DSA:2.40.50.140 448 521 3.6E-21 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS16035 3a715b3d0635089e27f33e920bee8f54 557 SUPERFAMILY SSF50249 429 535 1.72E-22 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS16035 3a715b3d0635089e27f33e920bee8f54 557 PRINTS PR00681 Ribosomal protein S1 signature 155 175 2.3E-99 T 09-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RG43_RS16035 3a715b3d0635089e27f33e920bee8f54 557 PRINTS PR00681 Ribosomal protein S1 signature 330 348 2.3E-99 T 09-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RG43_RS16035 3a715b3d0635089e27f33e920bee8f54 557 PRINTS PR00681 Ribosomal protein S1 signature 21 39 2.3E-99 T 09-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RG43_RS16035 3a715b3d0635089e27f33e920bee8f54 557 PRINTS PR00681 Ribosomal protein S1 signature 126 143 2.3E-99 T 09-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RG43_RS16035 3a715b3d0635089e27f33e920bee8f54 557 PRINTS PR00681 Ribosomal protein S1 signature 212 233 2.3E-99 T 09-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RG43_RS16035 3a715b3d0635089e27f33e920bee8f54 557 PRINTS PR00681 Ribosomal protein S1 signature 290 309 2.3E-99 T 09-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RG43_RS16035 3a715b3d0635089e27f33e920bee8f54 557 PRINTS PR00681 Ribosomal protein S1 signature 39 53 2.3E-99 T 09-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RG43_RS16035 3a715b3d0635089e27f33e920bee8f54 557 PRINTS PR00681 Ribosomal protein S1 signature 108 124 2.3E-99 T 09-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RG43_RS16035 3a715b3d0635089e27f33e920bee8f54 557 PRINTS PR00681 Ribosomal protein S1 signature 84 103 2.3E-99 T 09-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RG43_RS16035 3a715b3d0635089e27f33e920bee8f54 557 SUPERFAMILY SSF50249 362 443 1.56E-20 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS16035 3a715b3d0635089e27f33e920bee8f54 557 SMART SM00316 190 260 2.8E-28 T 09-03-2017 IPR022967 RNA-binding domain, S1 RG43_RS16035 3a715b3d0635089e27f33e920bee8f54 557 SMART SM00316 19 87 6.8E-5 T 09-03-2017 IPR022967 RNA-binding domain, S1 RG43_RS16035 3a715b3d0635089e27f33e920bee8f54 557 SMART SM00316 449 520 2.9E-22 T 09-03-2017 IPR022967 RNA-binding domain, S1 RG43_RS16035 3a715b3d0635089e27f33e920bee8f54 557 SMART SM00316 275 347 2.2E-27 T 09-03-2017 IPR022967 RNA-binding domain, S1 RG43_RS16035 3a715b3d0635089e27f33e920bee8f54 557 SMART SM00316 362 434 3.4E-21 T 09-03-2017 IPR022967 RNA-binding domain, S1 RG43_RS16035 3a715b3d0635089e27f33e920bee8f54 557 SMART SM00316 103 171 2.0E-8 T 09-03-2017 IPR022967 RNA-binding domain, S1 RG43_RS16035 3a715b3d0635089e27f33e920bee8f54 557 Pfam PF00575 S1 RNA binding domain 361 434 9.3E-22 T 09-03-2017 IPR003029 S1 domain GO:0003676 RG43_RS16035 3a715b3d0635089e27f33e920bee8f54 557 Pfam PF00575 S1 RNA binding domain 104 171 8.1E-10 T 09-03-2017 IPR003029 S1 domain GO:0003676 RG43_RS16035 3a715b3d0635089e27f33e920bee8f54 557 Pfam PF00575 S1 RNA binding domain 449 520 4.5E-18 T 09-03-2017 IPR003029 S1 domain GO:0003676 RG43_RS16035 3a715b3d0635089e27f33e920bee8f54 557 Pfam PF00575 S1 RNA binding domain 20 78 7.6E-7 T 09-03-2017 IPR003029 S1 domain GO:0003676 RG43_RS16035 3a715b3d0635089e27f33e920bee8f54 557 Pfam PF00575 S1 RNA binding domain 275 347 2.7E-20 T 09-03-2017 IPR003029 S1 domain GO:0003676 RG43_RS16035 3a715b3d0635089e27f33e920bee8f54 557 Pfam PF00575 S1 RNA binding domain 190 260 2.4E-21 T 09-03-2017 IPR003029 S1 domain GO:0003676 RG43_RS16035 3a715b3d0635089e27f33e920bee8f54 557 SUPERFAMILY SSF50249 255 371 1.03E-31 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS16035 3a715b3d0635089e27f33e920bee8f54 557 Gene3D G3DSA:2.40.50.140 21 101 1.3E-10 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS16035 3a715b3d0635089e27f33e920bee8f54 557 Gene3D G3DSA:2.40.50.140 279 359 3.9E-30 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS16035 3a715b3d0635089e27f33e920bee8f54 557 Gene3D G3DSA:2.40.50.140 192 278 6.7E-31 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS16035 3a715b3d0635089e27f33e920bee8f54 557 SUPERFAMILY SSF50249 1 112 9.43E-19 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS16035 3a715b3d0635089e27f33e920bee8f54 557 Gene3D G3DSA:2.40.50.140 360 439 5.8E-25 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS16035 3a715b3d0635089e27f33e920bee8f54 557 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 1.4E-241 T 09-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RG43_RS03380 73c565029da097e83d016724468b1b5c 402 PRINTS PR00471 Acetate kinase family signature 199 220 2.3E-47 T 09-03-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RG43_RS03380 73c565029da097e83d016724468b1b5c 402 PRINTS PR00471 Acetate kinase family signature 296 309 2.3E-47 T 09-03-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RG43_RS03380 73c565029da097e83d016724468b1b5c 402 PRINTS PR00471 Acetate kinase family signature 374 386 2.3E-47 T 09-03-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RG43_RS03380 73c565029da097e83d016724468b1b5c 402 PRINTS PR00471 Acetate kinase family signature 318 334 2.3E-47 T 09-03-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RG43_RS03380 73c565029da097e83d016724468b1b5c 402 PRINTS PR00471 Acetate kinase family signature 169 182 2.3E-47 T 09-03-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RG43_RS03380 73c565029da097e83d016724468b1b5c 402 PRINTS PR00471 Acetate kinase family signature 7 18 2.3E-47 T 09-03-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RG43_RS03380 73c565029da097e83d016724468b1b5c 402 TIGRFAM TIGR00016 ackA: acetate kinase 4 393 4.1E-172 T 09-03-2017 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RG43_RS03380 73c565029da097e83d016724468b1b5c 402 SUPERFAMILY SSF53067 153 392 2.33E-85 T 09-03-2017 RG43_RS03380 73c565029da097e83d016724468b1b5c 402 Hamap MF_01881 Propionate kinase [tdcD]. 1 402 78.154 T 09-03-2017 IPR024917 Propionate kinase KEGG: 00640+2.7.2.15|MetaCyc: PWY-5437|MetaCyc: PWY-7013 RG43_RS03380 73c565029da097e83d016724468b1b5c 402 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 7 18 - T 09-03-2017 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RG43_RS03380 73c565029da097e83d016724468b1b5c 402 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 199 216 - T 09-03-2017 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RG43_RS03380 73c565029da097e83d016724468b1b5c 402 Gene3D G3DSA:3.30.420.40 7 200 1.2E-11 T 09-03-2017 RG43_RS03380 73c565029da097e83d016724468b1b5c 402 SUPERFAMILY SSF53067 5 191 7.34E-65 T 09-03-2017 RG43_RS03380 73c565029da097e83d016724468b1b5c 402 Gene3D G3DSA:3.30.420.40 201 391 3.6E-71 T 09-03-2017 RG43_RS03380 73c565029da097e83d016724468b1b5c 402 Hamap MF_00020 Acetate kinase [ackA]. 1 396 163.408 T 09-03-2017 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RG43_RS03380 73c565029da097e83d016724468b1b5c 402 Pfam PF00871 Acetokinase family 7 386 2.6E-167 T 09-03-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RG43_RS03380 73c565029da097e83d016724468b1b5c 402 PIRSF PIRSF000722 3 397 6.7E-134 T 09-03-2017 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RG43_RS25000 d31ff10aaafa7da2eb446e4a3ae621a2 611 SMART SM00956 413 516 4.9E-48 T 09-03-2017 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 RG43_RS25000 d31ff10aaafa7da2eb446e4a3ae621a2 611 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 17 466 5.4E-210 T 09-03-2017 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 RG43_RS25000 d31ff10aaafa7da2eb446e4a3ae621a2 611 SMART SM00487 24 218 2.2E-30 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain RG43_RS25000 d31ff10aaafa7da2eb446e4a3ae621a2 611 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 15 603 5.6E-281 T 09-03-2017 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 RG43_RS25000 d31ff10aaafa7da2eb446e4a3ae621a2 611 Gene3D G3DSA:1.10.150.80 532 603 5.4E-24 T 09-03-2017 IPR002121 HRDC domain GO:0003676|GO:0005622 RG43_RS25000 d31ff10aaafa7da2eb446e4a3ae621a2 611 SMART SM00490 252 333 8.7E-29 T 09-03-2017 IPR001650 Helicase, C-terminal RG43_RS25000 d31ff10aaafa7da2eb446e4a3ae621a2 611 Gene3D G3DSA:1.10.10.10 347 517 6.2E-61 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS25000 d31ff10aaafa7da2eb446e4a3ae621a2 611 SUPERFAMILY SSF47819 532 607 3.27E-26 T 09-03-2017 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 RG43_RS25000 d31ff10aaafa7da2eb446e4a3ae621a2 611 Gene3D G3DSA:3.40.50.300 208 346 4.0E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25000 d31ff10aaafa7da2eb446e4a3ae621a2 611 Pfam PF00270 DEAD/DEAH box helicase 30 189 1.9E-19 T 09-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RG43_RS25000 d31ff10aaafa7da2eb446e4a3ae621a2 611 Gene3D G3DSA:3.40.50.300 8 204 2.7E-59 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25000 d31ff10aaafa7da2eb446e4a3ae621a2 611 SMART SM00341 531 611 1.9E-31 T 09-03-2017 IPR002121 HRDC domain GO:0003676|GO:0005622 RG43_RS25000 d31ff10aaafa7da2eb446e4a3ae621a2 611 Pfam PF00271 Helicase conserved C-terminal domain 226 333 2.8E-20 T 09-03-2017 IPR001650 Helicase, C-terminal RG43_RS25000 d31ff10aaafa7da2eb446e4a3ae621a2 611 Pfam PF16124 RecQ zinc-binding 345 406 9.7E-16 T 09-03-2017 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain RG43_RS25000 d31ff10aaafa7da2eb446e4a3ae621a2 611 Pfam PF00570 HRDC domain 535 601 3.4E-23 T 09-03-2017 IPR002121 HRDC domain GO:0003676|GO:0005622 RG43_RS25000 d31ff10aaafa7da2eb446e4a3ae621a2 611 Pfam PF09382 RQC domain 408 516 5.1E-35 T 09-03-2017 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 RG43_RS25000 d31ff10aaafa7da2eb446e4a3ae621a2 611 SUPERFAMILY SSF52540 210 458 1.83E-63 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25000 d31ff10aaafa7da2eb446e4a3ae621a2 611 SUPERFAMILY SSF52540 9 203 2.03E-46 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS12415 260d44bed7fa8dcab1d896019c54f35a 298 SUPERFAMILY SSF51430 4 295 1.06E-71 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain RG43_RS12415 260d44bed7fa8dcab1d896019c54f35a 298 Pfam PF00248 Aldo/keto reductase family 18 291 1.0E-57 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain RG43_RS12415 260d44bed7fa8dcab1d896019c54f35a 298 Gene3D G3DSA:3.20.20.100 2 292 6.3E-65 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain RG43_RS12415 260d44bed7fa8dcab1d896019c54f35a 298 PRINTS PR00069 Aldo-keto reductase signature 112 130 6.0E-6 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RG43_RS12415 260d44bed7fa8dcab1d896019c54f35a 298 PRINTS PR00069 Aldo-keto reductase signature 143 160 6.0E-6 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RG43_RS19415 b078ea90525b3cbfc99fedcbb28903f9 515 SUPERFAMILY SSF52210 349 507 1.71E-7 T 09-03-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 RG43_RS19415 b078ea90525b3cbfc99fedcbb28903f9 515 Pfam PF00549 CoA-ligase 346 503 4.7E-47 T 09-03-2017 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 RG43_RS19415 b078ea90525b3cbfc99fedcbb28903f9 515 SUPERFAMILY SSF52210 180 288 8.77E-20 T 09-03-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 RG43_RS19415 b078ea90525b3cbfc99fedcbb28903f9 515 Pfam PF02629 CoA binding domain 189 283 2.4E-15 T 09-03-2017 IPR003781 CoA-binding GO:0048037 RG43_RS19415 b078ea90525b3cbfc99fedcbb28903f9 515 Gene3D G3DSA:3.40.50.720 101 165 2.9E-4 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS19415 b078ea90525b3cbfc99fedcbb28903f9 515 Gene3D G3DSA:3.40.50.261 166 293 7.6E-24 T 09-03-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 RG43_RS14165 0424465a48a3cbb8a6abd83da8fa8531 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 3.6E-102 T 09-03-2017 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 RG43_RS14165 0424465a48a3cbb8a6abd83da8fa8531 268 Gene3D G3DSA:3.20.20.70 1 267 5.0E-99 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS14165 0424465a48a3cbb8a6abd83da8fa8531 268 SUPERFAMILY SSF51366 1 266 4.24E-92 T 09-03-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RG43_RS14165 0424465a48a3cbb8a6abd83da8fa8531 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 09-03-2017 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 RG43_RS14165 0424465a48a3cbb8a6abd83da8fa8531 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 9.4E-113 T 09-03-2017 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 RG43_RS14165 0424465a48a3cbb8a6abd83da8fa8531 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 38.685 T 09-03-2017 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 RG43_RS14420 da11db16b90d0c9b98b9deb569040ab4 463 Gene3D G3DSA:1.20.1250.20 252 457 1.4E-11 T 09-03-2017 RG43_RS14420 da11db16b90d0c9b98b9deb569040ab4 463 Gene3D G3DSA:1.20.1250.20 31 232 1.2E-13 T 09-03-2017 RG43_RS14420 da11db16b90d0c9b98b9deb569040ab4 463 TIGRFAM TIGR00886 2A0108: nitrite transporter 36 418 1.1E-118 T 09-03-2017 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 RG43_RS14420 da11db16b90d0c9b98b9deb569040ab4 463 Pfam PF07690 Major Facilitator Superfamily 45 422 3.8E-15 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS14420 da11db16b90d0c9b98b9deb569040ab4 463 SUPERFAMILY SSF103473 20 460 3.53E-36 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS14925 e454f8adfdbb16fee90be0163d3a14b7 273 Gene3D G3DSA:3.40.50.1220 106 148 1.4E-41 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain RG43_RS14925 e454f8adfdbb16fee90be0163d3a14b7 273 Gene3D G3DSA:3.40.50.1220 200 266 1.4E-41 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain RG43_RS14925 e454f8adfdbb16fee90be0163d3a14b7 273 Gene3D G3DSA:3.40.50.1220 39 56 1.4E-41 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain RG43_RS14925 e454f8adfdbb16fee90be0163d3a14b7 273 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 41 271 62.886 T 09-03-2017 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 RG43_RS14925 e454f8adfdbb16fee90be0163d3a14b7 273 Gene3D G3DSA:3.30.1600.10 149 193 9.8E-27 T 09-03-2017 IPR026591 Sirtuin family, catalytic core small domain RG43_RS14925 e454f8adfdbb16fee90be0163d3a14b7 273 Gene3D G3DSA:3.30.1600.10 57 96 9.8E-27 T 09-03-2017 IPR026591 Sirtuin family, catalytic core small domain RG43_RS14925 e454f8adfdbb16fee90be0163d3a14b7 273 SUPERFAMILY SSF52467 41 270 1.12E-74 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain RG43_RS14925 e454f8adfdbb16fee90be0163d3a14b7 273 Pfam PF02146 Sir2 family 48 221 9.5E-51 T 09-03-2017 IPR003000 Sirtuin family GO:0070403 RG43_RS21350 05abd258b62db9d4f9d4fd3f08018047 313 Gene3D G3DSA:3.40.50.1220 185 311 1.0E-48 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain RG43_RS21350 05abd258b62db9d4f9d4fd3f08018047 313 Hamap MF_01056 Protein FixB [fixB]. 1 313 59.319 T 09-03-2017 IPR023461 Electron transfer flavoprotein FixB subunit GO:0009437 RG43_RS21350 05abd258b62db9d4f9d4fd3f08018047 313 Gene3D G3DSA:3.40.50.620 5 171 9.2E-24 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS21350 05abd258b62db9d4f9d4fd3f08018047 313 SUPERFAMILY SSF52467 190 310 2.81E-41 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain RG43_RS21350 05abd258b62db9d4f9d4fd3f08018047 313 SMART SM00893 7 180 1.4E-13 T 09-03-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 RG43_RS21350 05abd258b62db9d4f9d4fd3f08018047 313 SUPERFAMILY SSF52402 7 169 1.88E-22 T 09-03-2017 RG43_RS21350 05abd258b62db9d4f9d4fd3f08018047 313 Pfam PF01012 Electron transfer flavoprotein domain 42 169 2.1E-14 T 09-03-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 RG43_RS21350 05abd258b62db9d4f9d4fd3f08018047 313 PIRSF PIRSF000089 3 313 3.3E-85 T 09-03-2017 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 RG43_RS21350 05abd258b62db9d4f9d4fd3f08018047 313 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 190 274 9.1E-30 T 09-03-2017 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 RG43_RS21350 05abd258b62db9d4f9d4fd3f08018047 313 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 255 281 - T 09-03-2017 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 RG43_RS05595 baec48ae63400feba2625020e82ba6c1 107 Pfam PF12528 Type II secretion prepilin peptidase dependent protein C 33 104 1.3E-23 T 09-03-2017 IPR022204 Prepilin peptidase dependent protein C RG43_RS05595 baec48ae63400feba2625020e82ba6c1 107 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 30 7.4E-6 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS05595 baec48ae63400feba2625020e82ba6c1 107 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS05595 baec48ae63400feba2625020e82ba6c1 107 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 6 30 1.7E-6 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS04820 2da8d510bc8dc29cc81635ada30305ad 193 ProDom PD036408 PAPJ PRECURSOR CHAPERONE SIGNAL PERIPLASMIC PIXJ PRSJ PLASMID PRFJ PILUS 3 193 5.0E-101 T 09-03-2017 IPR029224 Pilus-assembly complex, chaperone PapJ RG43_RS04820 2da8d510bc8dc29cc81635ada30305ad 193 Pfam PF14855 Pilus-assembly fibrillin subunit, chaperone 4 193 2.6E-86 T 09-03-2017 IPR029224 Pilus-assembly complex, chaperone PapJ RG43_RS16915 0c4ebf4727b78649327f8df5847bb7c7 110 Pfam PF02924 Bacteriophage lambda head decoration protein D 4 106 7.4E-17 T 09-03-2017 IPR004195 Head decoration protein D GO:0019028 RG43_RS16915 0c4ebf4727b78649327f8df5847bb7c7 110 Gene3D G3DSA:2.40.300.10 1 109 3.5E-49 T 09-03-2017 IPR004195 Head decoration protein D GO:0019028 RG43_RS16915 0c4ebf4727b78649327f8df5847bb7c7 110 ProDom PD020518 CAPSID HEAD PROPHAGE DECORATION SUBUNIT SMALL 3D-STRUCTURE MAJOR GIFSY-1 STRUCTURAL 24 110 9.0E-44 T 09-03-2017 IPR004195 Head decoration protein D GO:0019028 RG43_RS16915 0c4ebf4727b78649327f8df5847bb7c7 110 SUPERFAMILY SSF51274 16 109 1.01E-43 T 09-03-2017 IPR004195 Head decoration protein D GO:0019028 RG43_RS05420 91d4c25d94fc4d011c22c3a732c20600 403 Gene3D G3DSA:3.30.70.360 193 282 2.5E-15 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain RG43_RS05420 91d4c25d94fc4d011c22c3a732c20600 403 Pfam PF07687 Peptidase dimerisation domain 183 282 9.3E-18 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain RG43_RS05420 91d4c25d94fc4d011c22c3a732c20600 403 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 76 85 - T 09-03-2017 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 RG43_RS05420 91d4c25d94fc4d011c22c3a732c20600 403 SUPERFAMILY SSF55031 186 282 2.39E-13 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain RG43_RS05420 91d4c25d94fc4d011c22c3a732c20600 403 SUPERFAMILY SSF53187 10 185 7.54E-54 T 09-03-2017 RG43_RS05420 91d4c25d94fc4d011c22c3a732c20600 403 SUPERFAMILY SSF53187 316 399 7.54E-54 T 09-03-2017 RG43_RS05420 91d4c25d94fc4d011c22c3a732c20600 403 TIGRFAM TIGR03526 selenium_YgeY: putative selenium metabolism hydrolase 8 400 2.0E-217 T 09-03-2017 IPR017706 Peptidase M20/DapE, YgeY RG43_RS05420 91d4c25d94fc4d011c22c3a732c20600 403 Pfam PF01546 Peptidase family M20/M25/M40 78 395 1.4E-23 T 09-03-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RG43_RS05420 91d4c25d94fc4d011c22c3a732c20600 403 Gene3D G3DSA:3.40.630.10 14 192 1.4E-54 T 09-03-2017 RG43_RS05420 91d4c25d94fc4d011c22c3a732c20600 403 Gene3D G3DSA:3.40.630.10 311 395 1.4E-54 T 09-03-2017 RG43_RS12140 fbdc799fc498d423303cf43beb3ad1dc 312 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 189 271 4.8E-28 T 09-03-2017 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 RG43_RS12140 fbdc799fc498d423303cf43beb3ad1dc 312 Pfam PF01012 Electron transfer flavoprotein domain 24 168 8.2E-19 T 09-03-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 RG43_RS12140 fbdc799fc498d423303cf43beb3ad1dc 312 PIRSF PIRSF000089 3 312 3.9E-85 T 09-03-2017 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 RG43_RS12140 fbdc799fc498d423303cf43beb3ad1dc 312 SUPERFAMILY SSF52402 6 174 1.05E-27 T 09-03-2017 RG43_RS12140 fbdc799fc498d423303cf43beb3ad1dc 312 Gene3D G3DSA:3.40.50.620 3 166 3.2E-31 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS12140 fbdc799fc498d423303cf43beb3ad1dc 312 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 254 280 - T 09-03-2017 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 RG43_RS12140 fbdc799fc498d423303cf43beb3ad1dc 312 SUPERFAMILY SSF52467 189 309 6.95E-42 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain RG43_RS12140 fbdc799fc498d423303cf43beb3ad1dc 312 SMART SM00893 5 180 6.2E-12 T 09-03-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 RG43_RS12140 fbdc799fc498d423303cf43beb3ad1dc 312 Gene3D G3DSA:3.40.50.1220 184 310 1.2E-47 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain RG43_RS12945 8373328ef9a014cde7d8562b92aa66d7 291 SMART SM01133 51 259 1.2E-28 T 09-03-2017 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-71336 RG43_RS12945 8373328ef9a014cde7d8562b92aa66d7 291 Pfam PF01791 DeoC/LacD family aldolase 52 258 2.0E-17 T 09-03-2017 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-71336 RG43_RS12945 8373328ef9a014cde7d8562b92aa66d7 291 Gene3D G3DSA:3.20.20.70 34 284 3.0E-77 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS12945 8373328ef9a014cde7d8562b92aa66d7 291 PIRSF PIRSF038992 31 289 5.1E-85 T 09-03-2017 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-71336 RG43_RS12945 8373328ef9a014cde7d8562b92aa66d7 291 SUPERFAMILY SSF51569 35 275 6.59E-65 T 09-03-2017 RG43_RS12945 8373328ef9a014cde7d8562b92aa66d7 291 Hamap MF_02052 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase [lsrF]. 1 291 75.339 T 09-03-2017 IPR033673 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase GO:0016747 KEGG: 00600+2.3.1.24 RG43_RS16475 2c00bddd7088987a3cffe527b628a2b0 512 Gene3D G3DSA:3.10.105.10 281 481 6.6E-61 T 09-03-2017 RG43_RS16475 2c00bddd7088987a3cffe527b628a2b0 512 Gene3D G3DSA:3.40.190.10 130 280 1.8E-51 T 09-03-2017 RG43_RS16475 2c00bddd7088987a3cffe527b628a2b0 512 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 76 98 - T 09-03-2017 IPR023765 Solute-binding protein family 5, conserved site RG43_RS16475 2c00bddd7088987a3cffe527b628a2b0 512 PIRSF PIRSF002741 24 511 4.2E-109 T 09-03-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RG43_RS16475 2c00bddd7088987a3cffe527b628a2b0 512 SUPERFAMILY SSF53850 30 510 3.36E-145 T 09-03-2017 RG43_RS16475 2c00bddd7088987a3cffe527b628a2b0 512 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 71 429 1.6E-98 T 09-03-2017 IPR000914 Solute-binding protein family 5 domain RG43_RS13930 937ee6e922cb1a00c1f9b0d31e5dae47 547 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 457 5.1E-84 T 09-03-2017 IPR000914 Solute-binding protein family 5 domain RG43_RS13930 937ee6e922cb1a00c1f9b0d31e5dae47 547 Gene3D G3DSA:3.10.105.10 293 508 6.2E-54 T 09-03-2017 RG43_RS13930 937ee6e922cb1a00c1f9b0d31e5dae47 547 PIRSF PIRSF002741 1 543 1.5E-94 T 09-03-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RG43_RS13930 937ee6e922cb1a00c1f9b0d31e5dae47 547 SUPERFAMILY SSF53850 36 537 1.99E-133 T 09-03-2017 RG43_RS13930 937ee6e922cb1a00c1f9b0d31e5dae47 547 Gene3D G3DSA:3.90.76.10 44 223 1.5E-44 T 09-03-2017 RG43_RS13930 937ee6e922cb1a00c1f9b0d31e5dae47 547 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 84 106 - T 09-03-2017 IPR023765 Solute-binding protein family 5, conserved site RG43_RS15995 9f4df2af4ee8cc31129f6bc8c6d3b44d 297 SUPERFAMILY SSF56112 4 270 6.89E-27 T 09-03-2017 IPR011009 Protein kinase-like domain RG43_RS15995 9f4df2af4ee8cc31129f6bc8c6d3b44d 297 Pfam PF01636 Phosphotransferase enzyme family 64 238 3.3E-6 T 09-03-2017 IPR002575 Aminoglycoside phosphotransferase RG43_RS15995 9f4df2af4ee8cc31129f6bc8c6d3b44d 297 Gene3D G3DSA:3.90.1200.10 94 255 5.2E-8 T 09-03-2017 RG43_RS07945 43845b5728eabc4f079b0cfc939d8159 304 SUPERFAMILY SSF53613 2 303 1.26E-76 T 09-03-2017 IPR029056 Ribokinase-like RG43_RS07945 43845b5728eabc4f079b0cfc939d8159 304 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 245 258 - T 09-03-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RG43_RS07945 43845b5728eabc4f079b0cfc939d8159 304 Gene3D G3DSA:3.40.1190.20 2 304 4.8E-80 T 09-03-2017 IPR029056 Ribokinase-like RG43_RS07945 43845b5728eabc4f079b0cfc939d8159 304 Pfam PF00294 pfkB family carbohydrate kinase 3 298 1.1E-66 T 09-03-2017 IPR011611 Carbohydrate kinase PfkB RG43_RS07945 43845b5728eabc4f079b0cfc939d8159 304 PRINTS PR00990 Ribokinase signature 23 42 2.8E-6 T 09-03-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 RG43_RS07945 43845b5728eabc4f079b0cfc939d8159 304 PRINTS PR00990 Ribokinase signature 216 227 2.8E-6 T 09-03-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 RG43_RS07945 43845b5728eabc4f079b0cfc939d8159 304 PRINTS PR00990 Ribokinase signature 176 191 2.8E-6 T 09-03-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 RG43_RS07945 43845b5728eabc4f079b0cfc939d8159 304 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 28 52 - T 09-03-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RG43_RS26370 05397835251618755d36d09c85e6b600 493 Pfam PF02321 Outer membrane efflux protein 232 427 2.0E-33 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RG43_RS26370 05397835251618755d36d09c85e6b600 493 Pfam PF02321 Outer membrane efflux protein 27 209 3.5E-26 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RG43_RS26370 05397835251618755d36d09c85e6b600 493 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 21 443 9.7E-145 T 09-03-2017 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 RG43_RS26370 05397835251618755d36d09c85e6b600 493 Gene3D G3DSA:1.20.1600.10 15 434 2.9E-95 T 09-03-2017 RG43_RS26370 05397835251618755d36d09c85e6b600 493 SUPERFAMILY SSF56954 25 447 1.7E-99 T 09-03-2017 RG43_RS03995 05397835251618755d36d09c85e6b600 493 Pfam PF02321 Outer membrane efflux protein 232 427 2.0E-33 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RG43_RS03995 05397835251618755d36d09c85e6b600 493 Pfam PF02321 Outer membrane efflux protein 27 209 3.5E-26 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RG43_RS03995 05397835251618755d36d09c85e6b600 493 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 21 443 9.7E-145 T 09-03-2017 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 RG43_RS03995 05397835251618755d36d09c85e6b600 493 Gene3D G3DSA:1.20.1600.10 15 434 2.9E-95 T 09-03-2017 RG43_RS03995 05397835251618755d36d09c85e6b600 493 SUPERFAMILY SSF56954 25 447 1.7E-99 T 09-03-2017 RG43_RS17845 4eff4b7ee0ad58011f2270ddd618bc6a 224 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 118 6.2E-24 T 09-03-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RG43_RS17845 4eff4b7ee0ad58011f2270ddd618bc6a 224 SUPERFAMILY SSF161098 14 210 8.5E-39 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS17845 4eff4b7ee0ad58011f2270ddd618bc6a 224 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 223 1.8E-18 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS17845 4eff4b7ee0ad58011f2270ddd618bc6a 224 Gene3D G3DSA:1.10.3720.10 13 223 2.0E-45 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS25230 e130092e41361244e8362f098cdd0a85 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 252.259 T 09-03-2017 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 RG43_RS25230 e130092e41361244e8362f098cdd0a85 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 3.3E-17 T 09-03-2017 IPR011112 Rho termination factor, N-terminal GO:0006353 RG43_RS25230 e130092e41361244e8362f098cdd0a85 419 Gene3D G3DSA:2.40.50.140 49 117 6.5E-37 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS25230 e130092e41361244e8362f098cdd0a85 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 7.2E-223 T 09-03-2017 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 RG43_RS25230 e130092e41361244e8362f098cdd0a85 419 SMART SM00959 5 47 6.9E-18 T 09-03-2017 IPR011112 Rho termination factor, N-terminal GO:0006353 RG43_RS25230 e130092e41361244e8362f098cdd0a85 419 Gene3D G3DSA:1.10.720.10 1 47 1.4E-22 T 09-03-2017 RG43_RS25230 e130092e41361244e8362f098cdd0a85 419 Gene3D G3DSA:3.40.50.300 132 418 2.7E-106 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25230 e130092e41361244e8362f098cdd0a85 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 2.6E-32 T 09-03-2017 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 RG43_RS25230 e130092e41361244e8362f098cdd0a85 419 SMART SM00382 170 355 5.0E-9 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS25230 e130092e41361244e8362f098cdd0a85 419 SMART SM00357 52 118 9.6E-19 T 09-03-2017 IPR011129 Cold shock protein GO:0003676 RG43_RS25230 e130092e41361244e8362f098cdd0a85 419 SUPERFAMILY SSF68912 1 46 2.0E-12 T 09-03-2017 IPR011112 Rho termination factor, N-terminal GO:0006353 RG43_RS25230 e130092e41361244e8362f098cdd0a85 419 SUPERFAMILY SSF50249 48 125 9.0E-30 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS25230 e130092e41361244e8362f098cdd0a85 419 SUPERFAMILY SSF52540 90 371 1.49E-68 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25230 e130092e41361244e8362f098cdd0a85 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 1.3E-22 T 09-03-2017 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RG43_RS06470 b6b5c65701c21bbe27539faee629e370 111 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 5 104 3.7E-14 T 09-03-2017 IPR008407 Branched-chain amino acid transport, AzlD RG43_RS14310 14f679304a75856c58991218e268f535 302 SUPERFAMILY SSF161098 100 283 3.14E-23 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS14310 14f679304a75856c58991218e268f535 302 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 70 2.5E-14 T 09-03-2017 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RG43_RS14310 14f679304a75856c58991218e268f535 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 300 7.5E-26 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS14310 14f679304a75856c58991218e268f535 302 Gene3D G3DSA:1.10.3720.10 102 299 1.7E-21 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS02890 c667545cc31dddbb92ca630dd3a0f39c 472 Gene3D G3DSA:1.10.1060.10 5 149 1.1E-47 T 09-03-2017 RG43_RS02890 c667545cc31dddbb92ca630dd3a0f39c 472 SUPERFAMILY SSF46548 7 157 9.94E-42 T 09-03-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 RG43_RS02890 c667545cc31dddbb92ca630dd3a0f39c 472 SUPERFAMILY SSF51971 145 401 7.06E-70 T 09-03-2017 RG43_RS02890 c667545cc31dddbb92ca630dd3a0f39c 472 Gene3D G3DSA:3.50.50.60 237 400 4.0E-52 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS02890 c667545cc31dddbb92ca630dd3a0f39c 472 PRINTS PR00419 Adrenodoxin reductase family signature 324 337 4.8E-38 T 09-03-2017 RG43_RS02890 c667545cc31dddbb92ca630dd3a0f39c 472 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 4.8E-38 T 09-03-2017 RG43_RS02890 c667545cc31dddbb92ca630dd3a0f39c 472 PRINTS PR00419 Adrenodoxin reductase family signature 290 304 4.8E-38 T 09-03-2017 RG43_RS02890 c667545cc31dddbb92ca630dd3a0f39c 472 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 4.8E-38 T 09-03-2017 RG43_RS02890 c667545cc31dddbb92ca630dd3a0f39c 472 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 4.8E-38 T 09-03-2017 RG43_RS02890 c667545cc31dddbb92ca630dd3a0f39c 472 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 459 8.0E-26 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS02890 c667545cc31dddbb92ca630dd3a0f39c 472 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 5.8E-38 T 09-03-2017 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 RG43_RS02890 c667545cc31dddbb92ca630dd3a0f39c 472 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 472 5.5E-271 T 09-03-2017 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 RG43_RS02890 c667545cc31dddbb92ca630dd3a0f39c 472 Gene3D G3DSA:3.40.50.720 150 236 6.0E-36 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS02890 c667545cc31dddbb92ca630dd3a0f39c 472 Gene3D G3DSA:3.40.50.720 401 470 6.0E-36 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS25280 f084f8848f2d2d414e64e9fcdc05bb12 616 SUPERFAMILY SSF143975 3 420 8.24E-135 T 09-03-2017 RG43_RS25280 f084f8848f2d2d414e64e9fcdc05bb12 616 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 09-03-2017 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 RG43_RS25280 f084f8848f2d2d414e64e9fcdc05bb12 616 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 610 1.4E-273 T 09-03-2017 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 RG43_RS25280 f084f8848f2d2d414e64e9fcdc05bb12 616 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 09-03-2017 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 RG43_RS25280 f084f8848f2d2d414e64e9fcdc05bb12 616 Pfam PF00920 Dehydratase family 34 607 2.1E-218 T 09-03-2017 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 RG43_RS25280 f084f8848f2d2d414e64e9fcdc05bb12 616 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 610 45.346 T 09-03-2017 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 RG43_RS25280 f084f8848f2d2d414e64e9fcdc05bb12 616 SUPERFAMILY SSF52016 421 610 7.22E-60 T 09-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RG43_RS23775 bb3e0d7cf8c73e995b255695bc36b470 165 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 78 161 1.0E-4 T 09-03-2017 RG43_RS23775 bb3e0d7cf8c73e995b255695bc36b470 165 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 09-03-2017 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS23775 bb3e0d7cf8c73e995b255695bc36b470 165 Pfam PF00466 Ribosomal protein L10 5 101 6.2E-26 T 09-03-2017 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 RG43_RS23775 bb3e0d7cf8c73e995b255695bc36b470 165 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 162 26.856 T 09-03-2017 IPR022973 Ribosomal protein L10 RG43_RS23775 bb3e0d7cf8c73e995b255695bc36b470 165 SUPERFAMILY SSF160369 4 160 2.48E-48 T 09-03-2017 RG43_RS24970 9b6a8b733b36c0c5fff70612045a5b76 317 Gene3D G3DSA:3.40.190.10 178 253 7.7E-20 T 09-03-2017 RG43_RS24970 9b6a8b733b36c0c5fff70612045a5b76 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 5.0E-16 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS24970 9b6a8b733b36c0c5fff70612045a5b76 317 Pfam PF03466 LysR substrate binding domain 86 288 2.4E-43 T 09-03-2017 IPR005119 LysR, substrate-binding RG43_RS24970 9b6a8b733b36c0c5fff70612045a5b76 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.9E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS24970 9b6a8b733b36c0c5fff70612045a5b76 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.9E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS24970 9b6a8b733b36c0c5fff70612045a5b76 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.9E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS24970 9b6a8b733b36c0c5fff70612045a5b76 317 SUPERFAMILY SSF46785 2 109 7.07E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS24970 9b6a8b733b36c0c5fff70612045a5b76 317 SUPERFAMILY SSF53850 87 291 1.93E-41 T 09-03-2017 RG43_RS24970 9b6a8b733b36c0c5fff70612045a5b76 317 Gene3D G3DSA:1.10.10.10 1 87 1.0E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS24970 9b6a8b733b36c0c5fff70612045a5b76 317 Gene3D G3DSA:3.40.190.10 90 177 1.2E-14 T 09-03-2017 RG43_RS22485 3e40eedb7e2dc40a3f41a09094752176 425 Gene3D G3DSA:1.20.1250.20 216 414 1.0E-20 T 09-03-2017 RG43_RS22485 3e40eedb7e2dc40a3f41a09094752176 425 Gene3D G3DSA:1.20.1250.20 5 199 2.8E-51 T 09-03-2017 RG43_RS22485 3e40eedb7e2dc40a3f41a09094752176 425 Pfam PF07690 Major Facilitator Superfamily 15 318 2.4E-52 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS22485 3e40eedb7e2dc40a3f41a09094752176 425 PIRSF PIRSF002808 1 424 2.2E-42 T 09-03-2017 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 RG43_RS22485 3e40eedb7e2dc40a3f41a09094752176 425 SUPERFAMILY SSF103473 4 412 1.83E-84 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS02615 5f9f51aec8a6fbe6a0fdd0fc09759838 393 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 84 147 3.6E-17 T 09-03-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RG43_RS02615 5f9f51aec8a6fbe6a0fdd0fc09759838 393 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 388 9.0E-15 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS02615 5f9f51aec8a6fbe6a0fdd0fc09759838 393 SUPERFAMILY SSF161098 181 374 1.1E-28 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS02615 5f9f51aec8a6fbe6a0fdd0fc09759838 393 SUPERFAMILY SSF161098 83 151 9.81E-14 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS02615 5f9f51aec8a6fbe6a0fdd0fc09759838 393 Gene3D G3DSA:1.10.3720.10 182 388 1.2E-37 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS02615 5f9f51aec8a6fbe6a0fdd0fc09759838 393 Gene3D G3DSA:1.10.3720.10 82 152 1.1E-14 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS02295 53d660054404084c2f1a2d3466d46daf 387 Pfam PF05134 Type II secretion system (T2SS), protein L 6 232 1.3E-70 T 09-03-2017 IPR024230 GspL, cytoplasmic actin-ATPase-like domain RG43_RS02295 53d660054404084c2f1a2d3466d46daf 387 PIRSF PIRSF015761 19 377 1.3E-10 T 09-03-2017 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 RG43_RS02295 53d660054404084c2f1a2d3466d46daf 387 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 6 384 4.9E-112 T 09-03-2017 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 RG43_RS02295 53d660054404084c2f1a2d3466d46daf 387 Pfam PF12693 GspL periplasmic domain 240 384 1.7E-41 T 09-03-2017 IPR025691 GspL periplasmic domain RG43_RS02295 53d660054404084c2f1a2d3466d46daf 387 SUPERFAMILY SSF53067 5 143 9.32E-26 T 09-03-2017 RG43_RS04265 6b8d2f28091535c5185ecdc941bd4798 164 TIGRFAM TIGR00140 hupD: hydrogenase expression/formation protein 3 153 1.3E-55 T 09-03-2017 IPR004419 Peptidase A31, hydrogenase expression/formation protein GO:0016485|GO:0046872 RG43_RS04265 6b8d2f28091535c5185ecdc941bd4798 164 PRINTS PR00446 Hydrogen uptake protein signature 56 66 8.7E-24 T 09-03-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 RG43_RS04265 6b8d2f28091535c5185ecdc941bd4798 164 PRINTS PR00446 Hydrogen uptake protein signature 35 52 8.7E-24 T 09-03-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 RG43_RS04265 6b8d2f28091535c5185ecdc941bd4798 164 PRINTS PR00446 Hydrogen uptake protein signature 3 15 8.7E-24 T 09-03-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 RG43_RS04265 6b8d2f28091535c5185ecdc941bd4798 164 PRINTS PR00446 Hydrogen uptake protein signature 15 26 8.7E-24 T 09-03-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 RG43_RS04265 6b8d2f28091535c5185ecdc941bd4798 164 PRINTS PR00446 Hydrogen uptake protein signature 68 84 8.7E-24 T 09-03-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 RG43_RS04265 6b8d2f28091535c5185ecdc941bd4798 164 Gene3D G3DSA:3.40.50.1450 1 158 1.4E-52 T 09-03-2017 IPR023430 Peptidase HybD-like domain RG43_RS04265 6b8d2f28091535c5185ecdc941bd4798 164 Pfam PF01750 Hydrogenase maturation protease 20 147 1.3E-37 T 09-03-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 RG43_RS04265 6b8d2f28091535c5185ecdc941bd4798 164 SUPERFAMILY SSF53163 1 159 3.53E-46 T 09-03-2017 IPR023430 Peptidase HybD-like domain RG43_RS04265 6b8d2f28091535c5185ecdc941bd4798 164 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 4 148 4.4E-46 T 09-03-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 RG43_RS26640 6b8d2f28091535c5185ecdc941bd4798 164 TIGRFAM TIGR00140 hupD: hydrogenase expression/formation protein 3 153 1.3E-55 T 09-03-2017 IPR004419 Peptidase A31, hydrogenase expression/formation protein GO:0016485|GO:0046872 RG43_RS26640 6b8d2f28091535c5185ecdc941bd4798 164 PRINTS PR00446 Hydrogen uptake protein signature 56 66 8.7E-24 T 09-03-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 RG43_RS26640 6b8d2f28091535c5185ecdc941bd4798 164 PRINTS PR00446 Hydrogen uptake protein signature 35 52 8.7E-24 T 09-03-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 RG43_RS26640 6b8d2f28091535c5185ecdc941bd4798 164 PRINTS PR00446 Hydrogen uptake protein signature 3 15 8.7E-24 T 09-03-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 RG43_RS26640 6b8d2f28091535c5185ecdc941bd4798 164 PRINTS PR00446 Hydrogen uptake protein signature 15 26 8.7E-24 T 09-03-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 RG43_RS26640 6b8d2f28091535c5185ecdc941bd4798 164 PRINTS PR00446 Hydrogen uptake protein signature 68 84 8.7E-24 T 09-03-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 RG43_RS26640 6b8d2f28091535c5185ecdc941bd4798 164 Gene3D G3DSA:3.40.50.1450 1 158 1.4E-52 T 09-03-2017 IPR023430 Peptidase HybD-like domain RG43_RS26640 6b8d2f28091535c5185ecdc941bd4798 164 Pfam PF01750 Hydrogenase maturation protease 20 147 1.3E-37 T 09-03-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 RG43_RS26640 6b8d2f28091535c5185ecdc941bd4798 164 SUPERFAMILY SSF53163 1 159 3.53E-46 T 09-03-2017 IPR023430 Peptidase HybD-like domain RG43_RS26640 6b8d2f28091535c5185ecdc941bd4798 164 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 4 148 4.4E-46 T 09-03-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 RG43_RS08950 76d373ba0068fd85094e2559dd07a94a 376 SUPERFAMILY SSF55804 2 140 1.57E-39 T 09-03-2017 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 RG43_RS08950 76d373ba0068fd85094e2559dd07a94a 376 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 297 304 - T 09-03-2017 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site RG43_RS08950 76d373ba0068fd85094e2559dd07a94a 376 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 286 368 1.6E-21 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like RG43_RS08950 76d373ba0068fd85094e2559dd07a94a 376 Pfam PF00381 PTS HPr component phosphorylation site 287 368 8.1E-24 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like RG43_RS08950 76d373ba0068fd85094e2559dd07a94a 376 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 09-03-2017 IPR002178 PTS EIIA type-2 domain RG43_RS08950 76d373ba0068fd85094e2559dd07a94a 376 Gene3D G3DSA:3.30.1340.10 287 374 3.4E-31 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like RG43_RS08950 76d373ba0068fd85094e2559dd07a94a 376 SUPERFAMILY SSF55804 150 276 2.79E-12 T 09-03-2017 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 RG43_RS08950 76d373ba0068fd85094e2559dd07a94a 376 SUPERFAMILY SSF55594 287 375 5.5E-24 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like RG43_RS08950 76d373ba0068fd85094e2559dd07a94a 376 Gene3D G3DSA:3.40.930.10 150 278 2.0E-11 T 09-03-2017 IPR002178 PTS EIIA type-2 domain RG43_RS08950 76d373ba0068fd85094e2559dd07a94a 376 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 326 341 - T 09-03-2017 IPR002114 Phosphotransferase system, HPr serine phosphorylation site RG43_RS08950 76d373ba0068fd85094e2559dd07a94a 376 PRINTS PR00107 Phosphocarrier protein signature 340 357 2.1E-18 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like RG43_RS08950 76d373ba0068fd85094e2559dd07a94a 376 PRINTS PR00107 Phosphocarrier protein signature 297 313 2.1E-18 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like RG43_RS08950 76d373ba0068fd85094e2559dd07a94a 376 PRINTS PR00107 Phosphocarrier protein signature 325 340 2.1E-18 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like RG43_RS08950 76d373ba0068fd85094e2559dd07a94a 376 Gene3D G3DSA:3.40.930.10 5 141 9.1E-41 T 09-03-2017 IPR002178 PTS EIIA type-2 domain RG43_RS08950 76d373ba0068fd85094e2559dd07a94a 376 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 139 1.4E-29 T 09-03-2017 IPR002178 PTS EIIA type-2 domain RG43_RS22945 13a046f26bd163bd6fcd8918b2626f8a 543 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 435 535 1.1E-17 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS22945 13a046f26bd163bd6fcd8918b2626f8a 543 Gene3D G3DSA:1.10.287.130 329 387 1.3E-23 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS22945 13a046f26bd163bd6fcd8918b2626f8a 543 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 331 387 5.9E-12 T 09-03-2017 RG43_RS22945 13a046f26bd163bd6fcd8918b2626f8a 543 SUPERFAMILY SSF55890 338 465 1.57E-16 T 09-03-2017 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 RG43_RS22945 13a046f26bd163bd6fcd8918b2626f8a 543 SUPERFAMILY SSF55874 433 535 5.5E-29 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS22945 13a046f26bd163bd6fcd8918b2626f8a 543 SMART SM00091 222 288 7.4E-6 T 09-03-2017 IPR000014 PAS domain RG43_RS22945 13a046f26bd163bd6fcd8918b2626f8a 543 SMART SM00387 430 538 1.8E-24 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS22945 13a046f26bd163bd6fcd8918b2626f8a 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 497 1.3E-10 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS22945 13a046f26bd163bd6fcd8918b2626f8a 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 498 516 1.3E-10 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS22945 13a046f26bd163bd6fcd8918b2626f8a 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 535 1.3E-10 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS22945 13a046f26bd163bd6fcd8918b2626f8a 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 483 1.3E-10 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS22945 13a046f26bd163bd6fcd8918b2626f8a 543 Pfam PF00989 PAS fold 222 323 4.4E-14 T 09-03-2017 IPR013767 PAS fold GO:0006355 RG43_RS22945 13a046f26bd163bd6fcd8918b2626f8a 543 Gene3D G3DSA:3.30.565.10 416 535 1.4E-28 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS22945 13a046f26bd163bd6fcd8918b2626f8a 543 SUPERFAMILY SSF55785 222 323 7.04E-7 T 09-03-2017 IPR000014 PAS domain RG43_RS22945 13a046f26bd163bd6fcd8918b2626f8a 543 SUPERFAMILY SSF103190 46 179 2.83E-41 T 09-03-2017 IPR029151 Periplasmic sensor domain-like RG43_RS22945 13a046f26bd163bd6fcd8918b2626f8a 543 Pfam PF17203 Single cache domain 3 47 179 7.9E-22 T 09-03-2017 IPR033463 Single cache domain 3 RG43_RS22945 13a046f26bd163bd6fcd8918b2626f8a 543 Gene3D G3DSA:3.30.450.20 222 328 3.2E-12 T 09-03-2017 RG43_RS22945 13a046f26bd163bd6fcd8918b2626f8a 543 Gene3D G3DSA:3.30.450.20 41 179 9.2E-52 T 09-03-2017 RG43_RS15875 0fbf782e8804cd9b24d79ba131c38b6e 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 4.5E-169 T 09-03-2017 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RG43_RS15875 0fbf782e8804cd9b24d79ba131c38b6e 336 PIRSF PIRSF000164 11 336 2.9E-97 T 09-03-2017 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 RG43_RS15875 0fbf782e8804cd9b24d79ba131c38b6e 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 51.19 T 09-03-2017 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RG43_RS15875 0fbf782e8804cd9b24d79ba131c38b6e 336 SUPERFAMILY SSF51395 1 334 3.66E-105 T 09-03-2017 RG43_RS15875 0fbf782e8804cd9b24d79ba131c38b6e 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 335 4.7E-93 T 09-03-2017 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 RG43_RS15875 0fbf782e8804cd9b24d79ba131c38b6e 336 Gene3D G3DSA:3.20.20.70 1 335 3.9E-126 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS15875 0fbf782e8804cd9b24d79ba131c38b6e 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 09-03-2017 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 RG43_RS15875 0fbf782e8804cd9b24d79ba131c38b6e 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 09-03-2017 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 RG43_RS00620 b97b5b23e039d433080a01450a0c0bb0 348 Gene3D G3DSA:3.40.50.2000 168 344 3.3E-55 T 09-03-2017 RG43_RS00620 b97b5b23e039d433080a01450a0c0bb0 348 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 69 324 2.8E-91 T 09-03-2017 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 RG43_RS00620 b97b5b23e039d433080a01450a0c0bb0 348 Gene3D G3DSA:3.40.50.2000 1 147 1.9E-59 T 09-03-2017 RG43_RS00620 b97b5b23e039d433080a01450a0c0bb0 348 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 2 343 9.7E-172 T 09-03-2017 IPR011910 Lipopolysaccharide heptosyltransferase II GO:0009103|GO:0016757 RG43_RS00620 b97b5b23e039d433080a01450a0c0bb0 348 SUPERFAMILY SSF53756 1 343 6.28E-102 T 09-03-2017 RG43_RS08255 47031d27e711e099c93afff976a60c68 297 Gene3D G3DSA:3.90.25.10 199 248 1.8E-5 T 09-03-2017 RG43_RS08255 47031d27e711e099c93afff976a60c68 297 Gene3D G3DSA:3.40.50.720 1 198 2.1E-24 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS08255 47031d27e711e099c93afff976a60c68 297 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 292 5.6E-110 T 09-03-2017 IPR010099 Epimerase family protein SDR39U1 RG43_RS08255 47031d27e711e099c93afff976a60c68 297 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 214 7.4E-23 T 09-03-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RG43_RS08255 47031d27e711e099c93afff976a60c68 297 Pfam PF08338 Domain of unknown function (DUF1731) 249 295 4.1E-19 T 09-03-2017 IPR013549 Domain of unknown function DUF1731 RG43_RS08255 47031d27e711e099c93afff976a60c68 297 SUPERFAMILY SSF51735 1 296 1.6E-46 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS08730 46dac785022f3868bb42a619add8535f 548 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 32 516 2.2E-216 T 09-03-2017 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 RG43_RS08730 46dac785022f3868bb42a619add8535f 548 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 28 518 55.443 T 09-03-2017 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 RG43_RS08730 46dac785022f3868bb42a619add8535f 548 SUPERFAMILY SSF51905 28 91 7.22E-26 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS08730 46dac785022f3868bb42a619add8535f 548 SUPERFAMILY SSF51905 144 358 7.22E-26 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS08730 46dac785022f3868bb42a619add8535f 548 Gene3D G3DSA:3.50.50.60 173 358 4.1E-25 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS08730 46dac785022f3868bb42a619add8535f 548 Gene3D G3DSA:3.50.50.60 30 98 4.1E-25 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS08730 46dac785022f3868bb42a619add8535f 548 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 31 518 6.8E-240 T 09-03-2017 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 RG43_RS14025 46f9bb8609e9fcf64605b2d57ef608b8 245 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 15 237 5.7E-55 T 09-03-2017 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RG43_RS14025 46f9bb8609e9fcf64605b2d57ef608b8 245 SMART SM00934 16 237 1.8E-99 T 09-03-2017 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RG43_RS14025 46f9bb8609e9fcf64605b2d57ef608b8 245 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 17 237 3.0E-55 T 09-03-2017 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RG43_RS14025 46f9bb8609e9fcf64605b2d57ef608b8 245 Gene3D G3DSA:3.20.20.70 14 241 1.7E-89 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS14025 46f9bb8609e9fcf64605b2d57ef608b8 245 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 14 242 40.373 T 09-03-2017 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RG43_RS14025 46f9bb8609e9fcf64605b2d57ef608b8 245 SUPERFAMILY SSF51366 13 240 2.13E-79 T 09-03-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RG43_RS14025 46f9bb8609e9fcf64605b2d57ef608b8 245 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 68 81 - T 09-03-2017 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RG43_RS09185 9c1d67af1aa8f4d75db0d5795bd5a07e 243 SUPERFAMILY SSF46955 3 90 1.74E-19 T 09-03-2017 IPR009061 Putative DNA-binding domain RG43_RS09185 9c1d67af1aa8f4d75db0d5795bd5a07e 243 Pfam PF13411 MerR HTH family regulatory protein 4 72 2.3E-18 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RG43_RS09185 9c1d67af1aa8f4d75db0d5795bd5a07e 243 ProSitePatterns PS00552 MerR-type HTH domain signature. 7 30 - T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RG43_RS09185 9c1d67af1aa8f4d75db0d5795bd5a07e 243 SMART SM00422 4 73 5.2E-29 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RG43_RS09185 9c1d67af1aa8f4d75db0d5795bd5a07e 243 Gene3D G3DSA:1.10.1660.10 4 88 1.2E-19 T 09-03-2017 RG43_RS14560 0f8b0408a93ac084374cc6a9343a029f 472 Pfam PF00381 PTS HPr component phosphorylation site 160 236 3.6E-15 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like RG43_RS14560 0f8b0408a93ac084374cc6a9343a029f 472 TIGRFAM TIGR02364 dha_pts: dihydroxyacetone kinase, phosphotransfer subunit 2 127 4.4E-41 T 09-03-2017 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain RG43_RS14560 0f8b0408a93ac084374cc6a9343a029f 472 SUPERFAMILY SSF52009 355 463 6.41E-20 T 09-03-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RG43_RS14560 0f8b0408a93ac084374cc6a9343a029f 472 Pfam PF03610 PTS system fructose IIA component 4 120 3.8E-27 T 09-03-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 RG43_RS14560 0f8b0408a93ac084374cc6a9343a029f 472 Gene3D G3DSA:3.50.30.10 375 465 3.9E-18 T 09-03-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RG43_RS14560 0f8b0408a93ac084374cc6a9343a029f 472 Pfam PF05524 PEP-utilising enzyme, N-terminal 258 368 2.2E-20 T 09-03-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RG43_RS14560 0f8b0408a93ac084374cc6a9343a029f 472 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 159 234 7.5E-15 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like RG43_RS14560 0f8b0408a93ac084374cc6a9343a029f 472 Pfam PF00391 PEP-utilising enzyme, mobile domain 393 464 7.9E-14 T 09-03-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RG43_RS14560 0f8b0408a93ac084374cc6a9343a029f 472 Gene3D G3DSA:3.40.50.510 1 132 4.4E-46 T 09-03-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 RG43_RS14560 0f8b0408a93ac084374cc6a9343a029f 472 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 167 174 - T 09-03-2017 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site RG43_RS14560 0f8b0408a93ac084374cc6a9343a029f 472 Gene3D G3DSA:3.30.1340.10 159 241 1.7E-24 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like RG43_RS14560 0f8b0408a93ac084374cc6a9343a029f 472 Gene3D G3DSA:1.10.274.10 270 374 3.9E-31 T 09-03-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RG43_RS14560 0f8b0408a93ac084374cc6a9343a029f 472 PRINTS PR00107 Phosphocarrier protein signature 167 183 9.6E-7 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like RG43_RS14560 0f8b0408a93ac084374cc6a9343a029f 472 PRINTS PR00107 Phosphocarrier protein signature 207 224 9.6E-7 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like RG43_RS14560 0f8b0408a93ac084374cc6a9343a029f 472 PRINTS PR00107 Phosphocarrier protein signature 192 207 9.6E-7 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like RG43_RS14560 0f8b0408a93ac084374cc6a9343a029f 472 SUPERFAMILY SSF53062 1 127 1.7E-28 T 09-03-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 RG43_RS14560 0f8b0408a93ac084374cc6a9343a029f 472 SUPERFAMILY SSF55594 158 241 4.32E-19 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like RG43_RS14560 0f8b0408a93ac084374cc6a9343a029f 472 SUPERFAMILY SSF47831 276 384 2.22E-26 T 09-03-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RG43_RS08215 dd5cc4471613a9197984d0213d07baaa 505 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 466 2.7E-163 T 09-03-2017 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 RG43_RS08215 dd5cc4471613a9197984d0213d07baaa 505 SUPERFAMILY SSF56235 2 259 7.46E-75 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal RG43_RS08215 dd5cc4471613a9197984d0213d07baaa 505 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 468 45.141 T 09-03-2017 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 RG43_RS08215 dd5cc4471613a9197984d0213d07baaa 505 Gene3D G3DSA:3.40.50.2020 280 446 1.5E-47 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like RG43_RS08215 dd5cc4471613a9197984d0213d07baaa 505 Gene3D G3DSA:3.60.20.10 2 260 2.2E-64 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal RG43_RS08215 dd5cc4471613a9197984d0213d07baaa 505 SUPERFAMILY SSF53271 252 485 5.9E-72 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like RG43_RS08215 dd5cc4471613a9197984d0213d07baaa 505 Pfam PF00156 Phosphoribosyl transferase domain 286 394 1.2E-7 T 09-03-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 RG43_RS08215 dd5cc4471613a9197984d0213d07baaa 505 Pfam PF13522 Glutamine amidotransferase domain 64 202 1.8E-15 T 09-03-2017 RG43_RS08215 dd5cc4471613a9197984d0213d07baaa 505 PIRSF PIRSF000485 1 483 2.2E-173 T 09-03-2017 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 RG43_RS15075 747b29a0411fb07ef4d3cfb73a15cbb6 117 SUPERFAMILY SSF143422 19 101 6.02E-31 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RG43_RS15075 747b29a0411fb07ef4d3cfb73a15cbb6 117 Gene3D G3DSA:3.30.70.1290 16 101 3.4E-35 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RG43_RS15075 747b29a0411fb07ef4d3cfb73a15cbb6 117 Pfam PF01797 Transposase IS200 like 29 101 1.1E-22 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RG43_RS15075 747b29a0411fb07ef4d3cfb73a15cbb6 117 SMART SM01321 28 112 1.0E-11 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RG43_RS25185 713feb20f01c23d7c20d63295466234b 376 TIGRFAM TIGR02379 ECA_wecE: TDP-4-keto-6-deoxy-D-glucose transaminase 1 376 1.0E-222 T 09-03-2017 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like MetaCyc: PWY-7315 RG43_RS25185 713feb20f01c23d7c20d63295466234b 376 Hamap MF_02026 dTDP-4-amino-4,6-dideoxygalactose transaminase [wecE]. 1 376 78.664 T 09-03-2017 IPR032894 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE GO:0009246|GO:0019180 MetaCyc: PWY-7315 RG43_RS25185 713feb20f01c23d7c20d63295466234b 376 SUPERFAMILY SSF53383 2 375 7.6E-102 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS25185 713feb20f01c23d7c20d63295466234b 376 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 371 5.6E-86 T 09-03-2017 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RG43_RS25185 713feb20f01c23d7c20d63295466234b 376 Gene3D G3DSA:3.90.1150.10 251 375 4.4E-21 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RG43_RS25185 713feb20f01c23d7c20d63295466234b 376 PIRSF PIRSF000390 1 376 1.7E-122 T 09-03-2017 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RG43_RS25185 713feb20f01c23d7c20d63295466234b 376 Gene3D G3DSA:3.40.640.10 1 248 2.4E-79 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS26085 77b3708577bac4caccdf8dd2d30dbfe0 248 TIGRFAM TIGR02755 TraX_Ftype: type-F conjugative transfer system pilin acetylase TraX 25 247 6.9E-120 T 09-03-2017 IPR014125 Type-F conjugative transfer system pilin acetylase TraX RG43_RS26085 77b3708577bac4caccdf8dd2d30dbfe0 248 Pfam PF05857 TraX protein 32 246 1.0E-48 T 09-03-2017 IPR008875 TraX RG43_RS25855 832de665e72a18608c1aef38c56ea731 396 Hamap MF_01189 Purine ribonucleoside efflux pump NepI [nepI]. 1 396 48.491 T 09-03-2017 IPR023680 Purine ribonucleoside efflux pump, NepI GO:0015211|GO:0015860|GO:0016021 RG43_RS25855 832de665e72a18608c1aef38c56ea731 396 SUPERFAMILY SSF103473 13 391 3.4E-51 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS25855 832de665e72a18608c1aef38c56ea731 396 Gene3D G3DSA:1.20.1250.20 216 388 1.9E-9 T 09-03-2017 RG43_RS25855 832de665e72a18608c1aef38c56ea731 396 Gene3D G3DSA:1.20.1250.20 22 204 6.8E-25 T 09-03-2017 RG43_RS25855 832de665e72a18608c1aef38c56ea731 396 Pfam PF07690 Major Facilitator Superfamily 25 344 1.2E-31 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS21415 8a08628458302df6c4aa7e386693bc0d 304 Gene3D G3DSA:3.90.245.10 3 301 1.1E-101 T 09-03-2017 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain RG43_RS21415 8a08628458302df6c4aa7e386693bc0d 304 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 4 293 1.7E-69 T 09-03-2017 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain RG43_RS21415 8a08628458302df6c4aa7e386693bc0d 304 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 8 18 - T 09-03-2017 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 RG43_RS21415 8a08628458302df6c4aa7e386693bc0d 304 Hamap MF_01432 Non-specific ribonucleoside hydrolase RihC [rihC]. 1 304 80.746 T 09-03-2017 IPR022976 Non-specific ribonucleoside hydrolase RihC GO:0016798 RG43_RS21415 8a08628458302df6c4aa7e386693bc0d 304 SUPERFAMILY SSF53590 3 300 1.23E-95 T 09-03-2017 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain RG43_RS04145 88d77487609a0384c4f8b4fc5089a0d1 245 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 7.7E-52 T 09-03-2017 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 RG43_RS04145 88d77487609a0384c4f8b4fc5089a0d1 245 Pfam PF01553 Acyltransferase 54 180 3.5E-32 T 09-03-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RG43_RS04145 88d77487609a0384c4f8b4fc5089a0d1 245 Gene3D G3DSA:3.40.1130.10 64 233 3.7E-16 T 09-03-2017 RG43_RS04145 88d77487609a0384c4f8b4fc5089a0d1 245 SUPERFAMILY SSF69593 2 240 4.45E-62 T 09-03-2017 RG43_RS04145 88d77487609a0384c4f8b4fc5089a0d1 245 SMART SM00563 67 182 2.0E-39 T 09-03-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RG43_RS26520 88d77487609a0384c4f8b4fc5089a0d1 245 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 7.7E-52 T 09-03-2017 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 RG43_RS26520 88d77487609a0384c4f8b4fc5089a0d1 245 Pfam PF01553 Acyltransferase 54 180 3.5E-32 T 09-03-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RG43_RS26520 88d77487609a0384c4f8b4fc5089a0d1 245 Gene3D G3DSA:3.40.1130.10 64 233 3.7E-16 T 09-03-2017 RG43_RS26520 88d77487609a0384c4f8b4fc5089a0d1 245 SUPERFAMILY SSF69593 2 240 4.45E-62 T 09-03-2017 RG43_RS26520 88d77487609a0384c4f8b4fc5089a0d1 245 SMART SM00563 67 182 2.0E-39 T 09-03-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RG43_RS00100 318502bac10cf48ee99b7b70eaf4d0c1 255 SMART SM00382 27 215 3.4E-15 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS00100 318502bac10cf48ee99b7b70eaf4d0c1 255 Gene3D G3DSA:3.40.50.300 4 239 2.3E-67 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS00100 318502bac10cf48ee99b7b70eaf4d0c1 255 Pfam PF00005 ABC transporter 18 166 2.4E-33 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS00100 318502bac10cf48ee99b7b70eaf4d0c1 255 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS00100 318502bac10cf48ee99b7b70eaf4d0c1 255 SUPERFAMILY SSF52540 3 227 2.66E-63 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS19445 bbae56dbd181dfad944b8e1d2c9297ee 362 Gene3D G3DSA:1.10.10.10 26 73 4.2E-9 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS19445 bbae56dbd181dfad944b8e1d2c9297ee 362 SMART SM00052 105 351 5.4E-114 T 09-03-2017 IPR001633 EAL domain RG43_RS19445 bbae56dbd181dfad944b8e1d2c9297ee 362 SUPERFAMILY SSF46894 24 74 1.7E-9 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RG43_RS19445 bbae56dbd181dfad944b8e1d2c9297ee 362 Pfam PF00196 Bacterial regulatory proteins, luxR family 26 73 2.8E-10 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS19445 bbae56dbd181dfad944b8e1d2c9297ee 362 Pfam PF00563 EAL domain 112 346 8.9E-61 T 09-03-2017 IPR001633 EAL domain RG43_RS19445 bbae56dbd181dfad944b8e1d2c9297ee 362 Gene3D G3DSA:3.20.20.450 112 353 3.7E-72 T 09-03-2017 IPR001633 EAL domain RG43_RS19445 bbae56dbd181dfad944b8e1d2c9297ee 362 SMART SM00421 22 79 5.1E-10 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS19445 bbae56dbd181dfad944b8e1d2c9297ee 362 SUPERFAMILY SSF141868 112 354 2.62E-71 T 09-03-2017 IPR001633 EAL domain RG43_RS21525 b4dd51958f3c7a7a21e0f222dcbbd764 428 TIGRFAM TIGR00260 thrC: threonine synthase 52 397 7.9E-131 T 09-03-2017 IPR004450 Threonine synthase-like RG43_RS21525 b4dd51958f3c7a7a21e0f222dcbbd764 428 Gene3D G3DSA:3.90.1380.10 1 84 2.7E-22 T 09-03-2017 IPR029144 Threonine synthase, N-terminal RG43_RS21525 b4dd51958f3c7a7a21e0f222dcbbd764 428 Gene3D G3DSA:3.40.50.1100 196 319 7.6E-52 T 09-03-2017 RG43_RS21525 b4dd51958f3c7a7a21e0f222dcbbd764 428 Gene3D G3DSA:3.40.50.1100 324 401 2.3E-16 T 09-03-2017 RG43_RS21525 b4dd51958f3c7a7a21e0f222dcbbd764 428 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 97 111 - T 09-03-2017 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 RG43_RS21525 b4dd51958f3c7a7a21e0f222dcbbd764 428 SUPERFAMILY SSF53686 1 426 2.75E-132 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RG43_RS21525 b4dd51958f3c7a7a21e0f222dcbbd764 428 Pfam PF14821 Threonine synthase N terminus 8 80 7.5E-14 T 09-03-2017 IPR029144 Threonine synthase, N-terminal RG43_RS21525 b4dd51958f3c7a7a21e0f222dcbbd764 428 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 97 369 4.9E-24 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RG43_RS21525 b4dd51958f3c7a7a21e0f222dcbbd764 428 Gene3D G3DSA:3.40.50.1100 106 195 1.3E-12 T 09-03-2017 RG43_RS01930 5690d2c6319c67705b6d29ca206c0012 450 Gene3D G3DSA:1.10.287.130 223 288 2.5E-19 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS01930 5690d2c6319c67705b6d29ca206c0012 450 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 289 2.1E-10 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS01930 5690d2c6319c67705b6d29ca206c0012 450 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 438 2.8E-19 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS01930 5690d2c6319c67705b6d29ca206c0012 450 Pfam PF00672 HAMP domain 162 226 3.2E-12 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RG43_RS01930 5690d2c6319c67705b6d29ca206c0012 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 395 7.7E-13 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS01930 5690d2c6319c67705b6d29ca206c0012 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 381 7.7E-13 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS01930 5690d2c6319c67705b6d29ca206c0012 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 7.7E-13 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS01930 5690d2c6319c67705b6d29ca206c0012 450 SMART SM00304 180 232 6.2E-6 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RG43_RS01930 5690d2c6319c67705b6d29ca206c0012 450 Gene3D G3DSA:3.30.565.10 292 443 9.9E-36 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS01930 5690d2c6319c67705b6d29ca206c0012 450 SMART SM00388 233 293 7.2E-12 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS01930 5690d2c6319c67705b6d29ca206c0012 450 SUPERFAMILY SSF47384 217 291 5.89E-12 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS01930 5690d2c6319c67705b6d29ca206c0012 450 SMART SM00387 332 440 2.1E-29 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS01930 5690d2c6319c67705b6d29ca206c0012 450 SUPERFAMILY SSF55874 292 444 3.8E-35 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS20440 445249fb50660e5a16ed210c17eae3f7 256 Pfam PF08241 Methyltransferase domain 49 145 1.0E-25 T 09-03-2017 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 RG43_RS20440 445249fb50660e5a16ed210c17eae3f7 256 SUPERFAMILY SSF53335 11 242 6.6E-44 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS20440 445249fb50660e5a16ed210c17eae3f7 256 Gene3D G3DSA:3.40.50.150 34 254 1.8E-46 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS04245 557bfd076e53f845aacbe58a6a58980b 372 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 13 37 5.4E-6 T 09-03-2017 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RG43_RS04245 557bfd076e53f845aacbe58a6a58980b 372 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 59 204 3.2E-32 T 09-03-2017 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS04245 557bfd076e53f845aacbe58a6a58980b 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 156 180 3.6E-69 T 09-03-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 RG43_RS04245 557bfd076e53f845aacbe58a6a58980b 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 211 228 3.6E-69 T 09-03-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 RG43_RS04245 557bfd076e53f845aacbe58a6a58980b 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 67 91 3.6E-69 T 09-03-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 RG43_RS04245 557bfd076e53f845aacbe58a6a58980b 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 185 208 3.6E-69 T 09-03-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 RG43_RS04245 557bfd076e53f845aacbe58a6a58980b 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 113 136 3.6E-69 T 09-03-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 RG43_RS04245 557bfd076e53f845aacbe58a6a58980b 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 253 279 3.6E-69 T 09-03-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 RG43_RS04245 557bfd076e53f845aacbe58a6a58980b 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 229 247 3.6E-69 T 09-03-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 RG43_RS04245 557bfd076e53f845aacbe58a6a58980b 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 44 66 3.6E-69 T 09-03-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 RG43_RS04245 557bfd076e53f845aacbe58a6a58980b 372 Gene3D G3DSA:4.10.480.10 224 299 1.2E-31 T 09-03-2017 IPR027394 Cytochrome-c3 hydrogenase, C-terminal RG43_RS04245 557bfd076e53f845aacbe58a6a58980b 372 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 2 365 2.8E-197 T 09-03-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 RG43_RS04245 557bfd076e53f845aacbe58a6a58980b 372 PIRSF PIRSF000310 2 367 1.5E-136 T 09-03-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 RG43_RS04245 557bfd076e53f845aacbe58a6a58980b 372 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 224 302 1.2E-26 T 09-03-2017 IPR027394 Cytochrome-c3 hydrogenase, C-terminal RG43_RS04245 557bfd076e53f845aacbe58a6a58980b 372 Gene3D G3DSA:3.40.50.700 47 222 2.0E-60 T 09-03-2017 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS04245 557bfd076e53f845aacbe58a6a58980b 372 SUPERFAMILY SSF56770 44 302 1.07E-84 T 09-03-2017 RG43_RS26620 557bfd076e53f845aacbe58a6a58980b 372 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 13 37 5.4E-6 T 09-03-2017 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RG43_RS26620 557bfd076e53f845aacbe58a6a58980b 372 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 59 204 3.2E-32 T 09-03-2017 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS26620 557bfd076e53f845aacbe58a6a58980b 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 156 180 3.6E-69 T 09-03-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 RG43_RS26620 557bfd076e53f845aacbe58a6a58980b 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 211 228 3.6E-69 T 09-03-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 RG43_RS26620 557bfd076e53f845aacbe58a6a58980b 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 67 91 3.6E-69 T 09-03-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 RG43_RS26620 557bfd076e53f845aacbe58a6a58980b 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 185 208 3.6E-69 T 09-03-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 RG43_RS26620 557bfd076e53f845aacbe58a6a58980b 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 113 136 3.6E-69 T 09-03-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 RG43_RS26620 557bfd076e53f845aacbe58a6a58980b 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 253 279 3.6E-69 T 09-03-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 RG43_RS26620 557bfd076e53f845aacbe58a6a58980b 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 229 247 3.6E-69 T 09-03-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 RG43_RS26620 557bfd076e53f845aacbe58a6a58980b 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 44 66 3.6E-69 T 09-03-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 RG43_RS26620 557bfd076e53f845aacbe58a6a58980b 372 Gene3D G3DSA:4.10.480.10 224 299 1.2E-31 T 09-03-2017 IPR027394 Cytochrome-c3 hydrogenase, C-terminal RG43_RS26620 557bfd076e53f845aacbe58a6a58980b 372 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 2 365 2.8E-197 T 09-03-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 RG43_RS26620 557bfd076e53f845aacbe58a6a58980b 372 PIRSF PIRSF000310 2 367 1.5E-136 T 09-03-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 RG43_RS26620 557bfd076e53f845aacbe58a6a58980b 372 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 224 302 1.2E-26 T 09-03-2017 IPR027394 Cytochrome-c3 hydrogenase, C-terminal RG43_RS26620 557bfd076e53f845aacbe58a6a58980b 372 Gene3D G3DSA:3.40.50.700 47 222 2.0E-60 T 09-03-2017 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS26620 557bfd076e53f845aacbe58a6a58980b 372 SUPERFAMILY SSF56770 44 302 1.07E-84 T 09-03-2017 RG43_RS18365 5f819d49a6ac16831c1d28ed18dfb1c0 297 PRINTS PR01469 Bacterial carbamate kinase signature 201 216 5.1E-59 T 09-03-2017 RG43_RS18365 5f819d49a6ac16831c1d28ed18dfb1c0 297 PRINTS PR01469 Bacterial carbamate kinase signature 151 170 5.1E-59 T 09-03-2017 RG43_RS18365 5f819d49a6ac16831c1d28ed18dfb1c0 297 PRINTS PR01469 Bacterial carbamate kinase signature 174 192 5.1E-59 T 09-03-2017 RG43_RS18365 5f819d49a6ac16831c1d28ed18dfb1c0 297 PRINTS PR01469 Bacterial carbamate kinase signature 72 90 5.1E-59 T 09-03-2017 RG43_RS18365 5f819d49a6ac16831c1d28ed18dfb1c0 297 PRINTS PR01469 Bacterial carbamate kinase signature 42 61 5.1E-59 T 09-03-2017 RG43_RS18365 5f819d49a6ac16831c1d28ed18dfb1c0 297 PRINTS PR01469 Bacterial carbamate kinase signature 103 122 5.1E-59 T 09-03-2017 RG43_RS18365 5f819d49a6ac16831c1d28ed18dfb1c0 297 PRINTS PR01469 Bacterial carbamate kinase signature 252 267 5.1E-59 T 09-03-2017 RG43_RS18365 5f819d49a6ac16831c1d28ed18dfb1c0 297 Pfam PF00696 Amino acid kinase family 2 277 8.1E-28 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase RG43_RS18365 5f819d49a6ac16831c1d28ed18dfb1c0 297 SUPERFAMILY SSF53633 1 295 3.27E-71 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase RG43_RS18365 5f819d49a6ac16831c1d28ed18dfb1c0 297 PIRSF PIRSF000723 1 297 6.1E-112 T 09-03-2017 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 RG43_RS18365 5f819d49a6ac16831c1d28ed18dfb1c0 297 TIGRFAM TIGR00746 arcC: carbamate kinase 2 296 1.1E-128 T 09-03-2017 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 RG43_RS18365 5f819d49a6ac16831c1d28ed18dfb1c0 297 Gene3D G3DSA:3.40.1160.10 1 295 3.5E-92 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase RG43_RS21265 96fe4410181bee3c6484981039b33220 968 Pfam PF12137 RNA polymerase recycling family C-terminal 605 965 1.1E-158 T 09-03-2017 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 RG43_RS21265 96fe4410181bee3c6484981039b33220 968 SMART SM00490 517 601 1.7E-19 T 09-03-2017 IPR001650 Helicase, C-terminal RG43_RS21265 96fe4410181bee3c6484981039b33220 968 Gene3D G3DSA:3.40.50.300 483 627 3.7E-23 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS21265 96fe4410181bee3c6484981039b33220 968 SUPERFAMILY SSF52540 141 367 1.07E-36 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS21265 96fe4410181bee3c6484981039b33220 968 SMART SM00487 150 342 1.6E-20 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain RG43_RS21265 96fe4410181bee3c6484981039b33220 968 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 966 74.088 T 09-03-2017 IPR023949 RNA polymerase-associated protein RapA GO:0006355 RG43_RS21265 96fe4410181bee3c6484981039b33220 968 SUPERFAMILY SSF52540 480 649 2.72E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS21265 96fe4410181bee3c6484981039b33220 968 SUPERFAMILY SSF52540 273 337 2.72E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS21265 96fe4410181bee3c6484981039b33220 968 Pfam PF00176 SNF2 family N-terminal domain 174 441 9.0E-19 T 09-03-2017 IPR000330 SNF2-related, N-terminal domain GO:0005524 RG43_RS21265 96fe4410181bee3c6484981039b33220 968 Pfam PF00271 Helicase conserved C-terminal domain 493 601 3.9E-16 T 09-03-2017 IPR001650 Helicase, C-terminal RG43_RS21265 96fe4410181bee3c6484981039b33220 968 Gene3D G3DSA:3.40.50.300 154 320 4.9E-18 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS09470 f98fb006421bfa155c6b7faeb17112c9 219 Pfam PF00092 von Willebrand factor type A domain 24 173 2.8E-10 T 09-03-2017 IPR002035 von Willebrand factor, type A RG43_RS09470 f98fb006421bfa155c6b7faeb17112c9 219 Gene3D G3DSA:3.40.50.410 23 173 2.7E-11 T 09-03-2017 IPR002035 von Willebrand factor, type A RG43_RS09470 f98fb006421bfa155c6b7faeb17112c9 219 SMART SM00327 19 193 3.1E-18 T 09-03-2017 IPR002035 von Willebrand factor, type A RG43_RS09470 f98fb006421bfa155c6b7faeb17112c9 219 SUPERFAMILY SSF53300 22 173 1.01E-19 T 09-03-2017 IPR002035 von Willebrand factor, type A RG43_RS09470 f98fb006421bfa155c6b7faeb17112c9 219 PIRSF PIRSF020634 17 219 4.7E-98 T 09-03-2017 IPR011392 Tellurite resistance, TerY RG43_RS26755 c8fbfdf1c6b3b59195f108d468dbe34f 407 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 25 36 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS26755 c8fbfdf1c6b3b59195f108d468dbe34f 407 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS26755 c8fbfdf1c6b3b59195f108d468dbe34f 407 Pfam PF02754 Cysteine-rich domain 170 255 5.4E-13 T 09-03-2017 IPR004017 Cysteine-rich domain RG43_RS26755 c8fbfdf1c6b3b59195f108d468dbe34f 407 Pfam PF02754 Cysteine-rich domain 303 385 6.4E-13 T 09-03-2017 IPR004017 Cysteine-rich domain RG43_RS26755 c8fbfdf1c6b3b59195f108d468dbe34f 407 PIRSF PIRSF000139 5 407 1.8E-142 T 09-03-2017 IPR012257 Glycolate oxidase, iron-sulphur subunit RG43_RS26755 c8fbfdf1c6b3b59195f108d468dbe34f 407 Pfam PF13183 4Fe-4S dicluster domain 22 89 2.3E-12 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS26755 c8fbfdf1c6b3b59195f108d468dbe34f 407 Gene3D G3DSA:1.10.1060.10 8 106 2.8E-21 T 09-03-2017 RG43_RS26755 c8fbfdf1c6b3b59195f108d468dbe34f 407 SUPERFAMILY SSF54862 14 125 4.18E-20 T 09-03-2017 RG43_RS04380 c8fbfdf1c6b3b59195f108d468dbe34f 407 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 25 36 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS04380 c8fbfdf1c6b3b59195f108d468dbe34f 407 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS04380 c8fbfdf1c6b3b59195f108d468dbe34f 407 Pfam PF02754 Cysteine-rich domain 170 255 5.4E-13 T 09-03-2017 IPR004017 Cysteine-rich domain RG43_RS04380 c8fbfdf1c6b3b59195f108d468dbe34f 407 Pfam PF02754 Cysteine-rich domain 303 385 6.4E-13 T 09-03-2017 IPR004017 Cysteine-rich domain RG43_RS04380 c8fbfdf1c6b3b59195f108d468dbe34f 407 PIRSF PIRSF000139 5 407 1.8E-142 T 09-03-2017 IPR012257 Glycolate oxidase, iron-sulphur subunit RG43_RS04380 c8fbfdf1c6b3b59195f108d468dbe34f 407 Pfam PF13183 4Fe-4S dicluster domain 22 89 2.3E-12 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS04380 c8fbfdf1c6b3b59195f108d468dbe34f 407 Gene3D G3DSA:1.10.1060.10 8 106 2.8E-21 T 09-03-2017 RG43_RS04380 c8fbfdf1c6b3b59195f108d468dbe34f 407 SUPERFAMILY SSF54862 14 125 4.18E-20 T 09-03-2017 RG43_RS23465 599aa7bb9acb7c8383cd6e9a94258fbf 371 Pfam PF08402 TOBE domain 283 355 3.1E-11 T 09-03-2017 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 RG43_RS23465 599aa7bb9acb7c8383cd6e9a94258fbf 371 Pfam PF00005 ABC transporter 20 161 2.6E-32 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS23465 599aa7bb9acb7c8383cd6e9a94258fbf 371 SUPERFAMILY SSF52540 4 243 3.64E-85 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS23465 599aa7bb9acb7c8383cd6e9a94258fbf 371 SUPERFAMILY SSF50331 236 366 4.37E-32 T 09-03-2017 IPR008995 Molybdate/tungstate binding, C-terminal RG43_RS23465 599aa7bb9acb7c8383cd6e9a94258fbf 371 Gene3D G3DSA:3.40.50.300 3 236 7.3E-77 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS23465 599aa7bb9acb7c8383cd6e9a94258fbf 371 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS23465 599aa7bb9acb7c8383cd6e9a94258fbf 371 Gene3D G3DSA:2.40.50.140 290 347 1.1E-28 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS23465 599aa7bb9acb7c8383cd6e9a94258fbf 371 SMART SM00382 28 211 2.8E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS23465 599aa7bb9acb7c8383cd6e9a94258fbf 371 Gene3D G3DSA:2.40.50.100 239 289 2.3E-23 T 09-03-2017 RG43_RS03730 9dd31f36f6b6dbc14f74dd72492d56f3 535 Gene3D G3DSA:3.40.50.150 204 453 1.7E-38 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS03730 9dd31f36f6b6dbc14f74dd72492d56f3 535 SUPERFAMILY SSF53335 7 46 6.14E-132 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS03730 9dd31f36f6b6dbc14f74dd72492d56f3 535 SUPERFAMILY SSF53335 91 531 6.14E-132 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS03730 9dd31f36f6b6dbc14f74dd72492d56f3 535 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 6 508 2.8E-116 T 09-03-2017 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 RG43_RS03730 9dd31f36f6b6dbc14f74dd72492d56f3 535 Pfam PF02384 N-6 DNA Methylase 178 497 1.2E-101 T 09-03-2017 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 RG43_RS03730 9dd31f36f6b6dbc14f74dd72492d56f3 535 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 315 327 1.3E-19 T 09-03-2017 RG43_RS03730 9dd31f36f6b6dbc14f74dd72492d56f3 535 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 236 250 1.3E-19 T 09-03-2017 RG43_RS03730 9dd31f36f6b6dbc14f74dd72492d56f3 535 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 350 374 1.3E-19 T 09-03-2017 RG43_RS03730 9dd31f36f6b6dbc14f74dd72492d56f3 535 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 202 218 1.3E-19 T 09-03-2017 RG43_RS03730 9dd31f36f6b6dbc14f74dd72492d56f3 535 Pfam PF12161 HsdM N-terminal domain 9 168 3.0E-29 T 09-03-2017 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain RG43_RS03730 9dd31f36f6b6dbc14f74dd72492d56f3 535 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 318 324 - T 09-03-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RG43_RS26105 9dd31f36f6b6dbc14f74dd72492d56f3 535 Gene3D G3DSA:3.40.50.150 204 453 1.7E-38 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS26105 9dd31f36f6b6dbc14f74dd72492d56f3 535 SUPERFAMILY SSF53335 7 46 6.14E-132 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS26105 9dd31f36f6b6dbc14f74dd72492d56f3 535 SUPERFAMILY SSF53335 91 531 6.14E-132 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS26105 9dd31f36f6b6dbc14f74dd72492d56f3 535 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 6 508 2.8E-116 T 09-03-2017 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 RG43_RS26105 9dd31f36f6b6dbc14f74dd72492d56f3 535 Pfam PF02384 N-6 DNA Methylase 178 497 1.2E-101 T 09-03-2017 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 RG43_RS26105 9dd31f36f6b6dbc14f74dd72492d56f3 535 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 315 327 1.3E-19 T 09-03-2017 RG43_RS26105 9dd31f36f6b6dbc14f74dd72492d56f3 535 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 236 250 1.3E-19 T 09-03-2017 RG43_RS26105 9dd31f36f6b6dbc14f74dd72492d56f3 535 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 350 374 1.3E-19 T 09-03-2017 RG43_RS26105 9dd31f36f6b6dbc14f74dd72492d56f3 535 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 202 218 1.3E-19 T 09-03-2017 RG43_RS26105 9dd31f36f6b6dbc14f74dd72492d56f3 535 Pfam PF12161 HsdM N-terminal domain 9 168 3.0E-29 T 09-03-2017 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain RG43_RS26105 9dd31f36f6b6dbc14f74dd72492d56f3 535 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 318 324 - T 09-03-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RG43_RS07230 9f711a7f2cc8769de3bb348e059f2117 725 Pfam PF11924 Invasin beta-domain of outer membrane 62 336 7.2E-108 T 09-03-2017 IPR024519 Invasin beta-domain of outer membrane RG43_RS07230 9f711a7f2cc8769de3bb348e059f2117 725 PRINTS PR01369 Intimin signature 284 303 2.8E-9 T 09-03-2017 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 RG43_RS07230 9f711a7f2cc8769de3bb348e059f2117 725 PRINTS PR01369 Intimin signature 188 203 2.8E-9 T 09-03-2017 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 RG43_RS07230 9f711a7f2cc8769de3bb348e059f2117 725 PRINTS PR01369 Intimin signature 216 235 2.8E-9 T 09-03-2017 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 RG43_RS12845 4a92b140ac348aadc06aa8f221646876 296 SUPERFAMILY SSF55073 134 289 9.42E-41 T 09-03-2017 IPR029787 Nucleotide cyclase RG43_RS12845 4a92b140ac348aadc06aa8f221646876 296 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 128 285 2.8E-38 T 09-03-2017 IPR000160 GGDEF domain RG43_RS12845 4a92b140ac348aadc06aa8f221646876 296 SMART SM00267 118 287 1.8E-60 T 09-03-2017 IPR000160 GGDEF domain RG43_RS12845 4a92b140ac348aadc06aa8f221646876 296 Gene3D G3DSA:3.30.70.270 131 290 1.7E-45 T 09-03-2017 RG43_RS12845 4a92b140ac348aadc06aa8f221646876 296 Pfam PF13682 Chemoreceptor zinc-binding domain 22 89 1.7E-5 T 09-03-2017 IPR025991 Chemoreceptor zinc-binding domain RG43_RS12845 4a92b140ac348aadc06aa8f221646876 296 Pfam PF00990 Diguanylate cyclase, GGDEF domain 130 283 3.4E-44 T 09-03-2017 IPR000160 GGDEF domain RG43_RS09655 7138c44454858404cb97bf6d4aaa828d 295 Pfam PF14305 TupA-like ATPgrasp 48 293 3.5E-50 T 09-03-2017 IPR029465 TupA-like ATPgrasp protein RG43_RS07095 34985f3ce0eea0248c324d06bf9e04dc 426 Gene3D G3DSA:1.10.1790.10 231 332 1.7E-15 T 09-03-2017 IPR011608 PRD domain GO:0006355 RG43_RS07095 34985f3ce0eea0248c324d06bf9e04dc 426 Pfam PF00874 PRD domain 131 216 2.3E-9 T 09-03-2017 IPR011608 PRD domain GO:0006355 RG43_RS07095 34985f3ce0eea0248c324d06bf9e04dc 426 Pfam PF00874 PRD domain 240 328 4.6E-11 T 09-03-2017 IPR011608 PRD domain GO:0006355 RG43_RS07095 34985f3ce0eea0248c324d06bf9e04dc 426 SUPERFAMILY SSF63520 231 333 3.66E-15 T 09-03-2017 IPR011608 PRD domain GO:0006355 RG43_RS21010 526593fc61e64af14531bcdb3726ac37 461 Gene3D G3DSA:3.40.50.300 192 457 5.4E-94 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS21010 526593fc61e64af14531bcdb3726ac37 461 SMART SM00382 214 379 0.0084 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS21010 526593fc61e64af14531bcdb3726ac37 461 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 8 68 1.8E-5 T 09-03-2017 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 RG43_RS21010 526593fc61e64af14531bcdb3726ac37 461 Pfam PF00437 Type II/IV secretion system protein 89 353 7.3E-84 T 09-03-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RG43_RS21010 526593fc61e64af14531bcdb3726ac37 461 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 281 295 - T 09-03-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RG43_RS21010 526593fc61e64af14531bcdb3726ac37 461 Gene3D G3DSA:3.30.450.90 52 186 3.4E-44 T 09-03-2017 RG43_RS21010 526593fc61e64af14531bcdb3726ac37 461 SUPERFAMILY SSF52540 79 454 2.25E-87 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS06435 c17a6b2b10d2fa8dfc47691a19199fb9 188 Gene3D G3DSA:3.40.50.1000 90 185 1.2E-37 T 09-03-2017 IPR023214 HAD-like domain RG43_RS06435 c17a6b2b10d2fa8dfc47691a19199fb9 188 Gene3D G3DSA:3.40.50.1000 4 18 1.2E-37 T 09-03-2017 IPR023214 HAD-like domain RG43_RS06435 c17a6b2b10d2fa8dfc47691a19199fb9 188 Gene3D G3DSA:1.10.150.240 19 75 3.3E-4 T 09-03-2017 IPR023198 Phosphoglycolate phosphatase, domain 2 RG43_RS06435 c17a6b2b10d2fa8dfc47691a19199fb9 188 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 183 1.6E-29 T 09-03-2017 IPR023214 HAD-like domain RG43_RS06435 c17a6b2b10d2fa8dfc47691a19199fb9 188 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 174 187 3.9E-7 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RG43_RS06435 c17a6b2b10d2fa8dfc47691a19199fb9 188 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 5 16 3.9E-7 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RG43_RS06435 c17a6b2b10d2fa8dfc47691a19199fb9 188 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 3.9E-7 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RG43_RS06435 c17a6b2b10d2fa8dfc47691a19199fb9 188 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 147 167 3.9E-7 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RG43_RS06435 c17a6b2b10d2fa8dfc47691a19199fb9 188 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 5 185 1.4E-66 T 09-03-2017 IPR010976 Beta-phosphoglucomutase hydrolase RG43_RS06435 c17a6b2b10d2fa8dfc47691a19199fb9 188 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 121 183 4.2E-16 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RG43_RS06435 c17a6b2b10d2fa8dfc47691a19199fb9 188 SUPERFAMILY SSF56784 5 185 2.67E-46 T 09-03-2017 IPR023214 HAD-like domain RG43_RS16075 4f77b69d5001ba9fc7590c12d8fa535f 760 SUPERFAMILY SSF51998 4 759 5.49E-296 T 09-03-2017 RG43_RS16075 4f77b69d5001ba9fc7590c12d8fa535f 760 Pfam PF02901 Pyruvate formate lyase-like 23 614 3.7E-208 T 09-03-2017 IPR004184 Pyruvate formate lyase domain GO:0003824 RG43_RS16075 4f77b69d5001ba9fc7590c12d8fa535f 760 Pfam PF01228 Glycine radical 630 741 4.3E-43 T 09-03-2017 IPR001150 Glycine radical domain GO:0003824|GO:0008152 RG43_RS16075 4f77b69d5001ba9fc7590c12d8fa535f 760 PIRSF PIRSF000379 8 760 0.0 T 09-03-2017 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 RG43_RS16075 4f77b69d5001ba9fc7590c12d8fa535f 760 ProSitePatterns PS00850 Glycine radical domain signature. 730 738 - T 09-03-2017 IPR019777 Formate C-acetyltransferase glycine radical, conserved site RG43_RS16075 4f77b69d5001ba9fc7590c12d8fa535f 760 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 11 760 0.0 T 09-03-2017 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 RG43_RS16075 4f77b69d5001ba9fc7590c12d8fa535f 760 Gene3D G3DSA:3.20.70.20 5 760 0.0 T 09-03-2017 RG43_RS05330 974b7c37f6dc3317d88a56abc638eeae 182 PIRSF PIRSF018427 1 181 3.3E-58 T 09-03-2017 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 RG43_RS05330 974b7c37f6dc3317d88a56abc638eeae 182 TIGRFAM TIGR02150 IPP_isom_1: isopentenyl-diphosphate delta-isomerase 6 165 1.2E-46 T 09-03-2017 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 RG43_RS05330 974b7c37f6dc3317d88a56abc638eeae 182 Gene3D G3DSA:3.90.79.10 1 166 1.1E-45 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 RG43_RS05330 974b7c37f6dc3317d88a56abc638eeae 182 SUPERFAMILY SSF55811 4 166 5.15E-51 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 RG43_RS05330 974b7c37f6dc3317d88a56abc638eeae 182 Hamap MF_00202 Isopentenyl-diphosphate Delta-isomerase [idi]. 4 177 34.336 T 09-03-2017 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 RG43_RS05330 974b7c37f6dc3317d88a56abc638eeae 182 Pfam PF00293 NUDIX domain 31 161 3.1E-20 T 09-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 RG43_RS15660 9fd84035a7a9e558a88bdbc3f03261d2 248 Pfam PF06251 Capsule biosynthesis GfcC 21 247 7.8E-88 T 09-03-2017 IPR010425 Domain of unknown function DUF1017 RG43_RS07130 e8b7d7694ac4753e5216a53d66d207fe 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 9.9E-38 T 09-03-2017 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 RG43_RS07130 e8b7d7694ac4753e5216a53d66d207fe 107 Hamap MF_01429 Iron-binding protein IscA [iscA]. 1 107 46.634 T 09-03-2017 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 RG43_RS07130 e8b7d7694ac4753e5216a53d66d207fe 107 SUPERFAMILY SSF89360 1 96 1.01E-32 T 09-03-2017 IPR000361 FeS cluster biogenesis RG43_RS07130 e8b7d7694ac4753e5216a53d66d207fe 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 09-03-2017 IPR017870 FeS cluster insertion, C-terminal, conserved site RG43_RS07130 e8b7d7694ac4753e5216a53d66d207fe 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 3.5E-26 T 09-03-2017 IPR000361 FeS cluster biogenesis RG43_RS07130 e8b7d7694ac4753e5216a53d66d207fe 107 Gene3D G3DSA:2.60.300.12 2 96 7.0E-35 T 09-03-2017 IPR000361 FeS cluster biogenesis RG43_RS07130 e8b7d7694ac4753e5216a53d66d207fe 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 2.6E-62 T 09-03-2017 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 RG43_RS14370 f012b2a04663586dd5a056703bec733b 280 SUPERFAMILY SSF53328 86 279 5.36E-61 T 09-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RG43_RS14370 f012b2a04663586dd5a056703bec733b 280 Gene3D G3DSA:3.40.50.170 86 277 6.1E-58 T 09-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RG43_RS14370 f012b2a04663586dd5a056703bec733b 280 Gene3D G3DSA:3.30.70.260 6 71 4.2E-12 T 09-03-2017 RG43_RS14370 f012b2a04663586dd5a056703bec733b 280 Pfam PF01842 ACT domain 8 69 5.6E-8 T 09-03-2017 IPR002912 ACT domain GO:0008152|GO:0016597 RG43_RS14370 f012b2a04663586dd5a056703bec733b 280 SUPERFAMILY SSF55021 6 67 4.0E-9 T 09-03-2017 RG43_RS14370 f012b2a04663586dd5a056703bec733b 280 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 8 280 8.1E-134 T 09-03-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 RG43_RS14370 f012b2a04663586dd5a056703bec733b 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 41 53 4.4E-70 T 09-03-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 RG43_RS14370 f012b2a04663586dd5a056703bec733b 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 86 108 4.4E-70 T 09-03-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 RG43_RS14370 f012b2a04663586dd5a056703bec733b 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 254 279 4.4E-70 T 09-03-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 RG43_RS14370 f012b2a04663586dd5a056703bec733b 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 9 35 4.4E-70 T 09-03-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 RG43_RS14370 f012b2a04663586dd5a056703bec733b 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 232 254 4.4E-70 T 09-03-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 RG43_RS14370 f012b2a04663586dd5a056703bec733b 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 108 135 4.4E-70 T 09-03-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 RG43_RS14370 f012b2a04663586dd5a056703bec733b 280 PIRSF PIRSF036480 4 280 2.1E-114 T 09-03-2017 RG43_RS14370 f012b2a04663586dd5a056703bec733b 280 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 4 280 46.449 T 09-03-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 RG43_RS14370 f012b2a04663586dd5a056703bec733b 280 Pfam PF00551 Formyl transferase 86 262 4.6E-56 T 09-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RG43_RS17910 7d9bfdff0a6187a8191f4f417e08fab1 362 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 81 180 6.7E-29 T 09-03-2017 IPR012997 Rare lipoprotein A RG43_RS17910 7d9bfdff0a6187a8191f4f417e08fab1 362 Gene3D G3DSA:3.30.70.1070 284 359 1.1E-16 T 09-03-2017 IPR007730 Sporulation-related domain GO:0042834 RG43_RS17910 7d9bfdff0a6187a8191f4f417e08fab1 362 Pfam PF03330 Lytic transglycolase 79 166 6.1E-20 T 09-03-2017 IPR009009 RlpA-like protein, double-psi beta-barrel domain RG43_RS17910 7d9bfdff0a6187a8191f4f417e08fab1 362 SUPERFAMILY SSF110997 287 357 9.02E-16 T 09-03-2017 IPR007730 Sporulation-related domain GO:0042834 RG43_RS17910 7d9bfdff0a6187a8191f4f417e08fab1 362 SUPERFAMILY SSF50685 79 160 2.41E-6 T 09-03-2017 IPR009009 RlpA-like protein, double-psi beta-barrel domain RG43_RS17910 7d9bfdff0a6187a8191f4f417e08fab1 362 Pfam PF05036 Sporulation related domain 287 359 1.5E-16 T 09-03-2017 IPR007730 Sporulation-related domain GO:0042834 RG43_RS15000 15851ca100c58d0c231187a4544c9ee5 213 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 6 212 5.8E-65 T 09-03-2017 IPR014094 Penicillin-binding protein activator LpoB RG43_RS15000 15851ca100c58d0c231187a4544c9ee5 213 Hamap MF_01889 Penicillin-binding protein activator LpoB [lpoB]. 4 211 35.098 T 09-03-2017 IPR014094 Penicillin-binding protein activator LpoB RG43_RS15000 15851ca100c58d0c231187a4544c9ee5 213 Pfam PF13036 Peptidoglycan-synthase activator LpoB 10 210 5.6E-56 T 09-03-2017 IPR014094 Penicillin-binding protein activator LpoB RG43_RS00820 d04f3abcfc1e4a6c02c883ba0836c683 271 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 215 257 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RG43_RS00820 d04f3abcfc1e4a6c02c883ba0836c683 271 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 230 245 3.6E-5 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RG43_RS00820 d04f3abcfc1e4a6c02c883ba0836c683 271 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 261 3.6E-5 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RG43_RS00820 d04f3abcfc1e4a6c02c883ba0836c683 271 Gene3D G3DSA:1.10.10.60 166 214 3.7E-6 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS00820 d04f3abcfc1e4a6c02c883ba0836c683 271 Pfam PF12833 Helix-turn-helix domain 184 263 2.0E-18 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS00820 d04f3abcfc1e4a6c02c883ba0836c683 271 Gene3D G3DSA:1.10.10.60 215 265 5.6E-14 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS00820 d04f3abcfc1e4a6c02c883ba0836c683 271 Gene3D G3DSA:2.60.120.280 25 146 8.0E-13 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RG43_RS00820 d04f3abcfc1e4a6c02c883ba0836c683 271 SUPERFAMILY SSF51215 7 146 1.09E-14 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RG43_RS00820 d04f3abcfc1e4a6c02c883ba0836c683 271 SMART SM00342 178 261 3.8E-20 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS00820 d04f3abcfc1e4a6c02c883ba0836c683 271 Pfam PF02311 AraC-like ligand binding domain 26 132 9.7E-9 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RG43_RS00820 d04f3abcfc1e4a6c02c883ba0836c683 271 SUPERFAMILY SSF46689 215 264 7.17E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS18575 d8823cb3db7cbaf20c83811260535083 550 ProSitePatterns PS00786 5'-nucleotidase signature 2. 109 120 - T 09-03-2017 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS18575 d8823cb3db7cbaf20c83811260535083 550 SUPERFAMILY SSF55816 363 543 5.76E-54 T 09-03-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS18575 d8823cb3db7cbaf20c83811260535083 550 Gene3D G3DSA:3.90.780.10 363 540 1.3E-56 T 09-03-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS18575 d8823cb3db7cbaf20c83811260535083 550 Pfam PF00149 Calcineurin-like phosphoesterase 35 254 8.1E-18 T 09-03-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RG43_RS18575 d8823cb3db7cbaf20c83811260535083 550 Pfam PF02872 5'-nucleotidase, C-terminal domain 363 509 2.7E-32 T 09-03-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS18575 d8823cb3db7cbaf20c83811260535083 550 ProSitePatterns PS00785 5'-nucleotidase signature 1. 34 46 - T 09-03-2017 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS18575 d8823cb3db7cbaf20c83811260535083 550 PRINTS PR01607 Apyrase family signature 207 224 2.1E-62 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS18575 d8823cb3db7cbaf20c83811260535083 550 PRINTS PR01607 Apyrase family signature 32 50 2.1E-62 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS18575 d8823cb3db7cbaf20c83811260535083 550 PRINTS PR01607 Apyrase family signature 283 303 2.1E-62 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS18575 d8823cb3db7cbaf20c83811260535083 550 PRINTS PR01607 Apyrase family signature 238 261 2.1E-62 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS18575 d8823cb3db7cbaf20c83811260535083 550 PRINTS PR01607 Apyrase family signature 417 440 2.1E-62 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS18575 d8823cb3db7cbaf20c83811260535083 550 PRINTS PR01607 Apyrase family signature 484 503 2.1E-62 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS18575 d8823cb3db7cbaf20c83811260535083 550 Gene3D G3DSA:3.60.21.10 28 361 1.9E-95 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like RG43_RS18575 d8823cb3db7cbaf20c83811260535083 550 SUPERFAMILY SSF56300 27 360 4.75E-94 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like RG43_RS17620 890fd0a18888793265842910f4806d09 225 Gene3D G3DSA:3.40.50.2300 3 122 5.8E-37 T 09-03-2017 RG43_RS17620 890fd0a18888793265842910f4806d09 225 SMART SM00448 2 112 2.4E-40 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS17620 890fd0a18888793265842910f4806d09 225 SUPERFAMILY SSF52172 3 176 1.57E-39 T 09-03-2017 IPR011006 CheY-like superfamily RG43_RS17620 890fd0a18888793265842910f4806d09 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 223 6.7E-22 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RG43_RS17620 890fd0a18888793265842910f4806d09 225 Pfam PF00072 Response regulator receiver domain 4 112 2.0E-29 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS17620 890fd0a18888793265842910f4806d09 225 Gene3D G3DSA:1.10.10.10 126 223 9.7E-29 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS17620 890fd0a18888793265842910f4806d09 225 SMART SM00862 147 223 2.1E-22 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RG43_RS12585 f109cb5c9d33fee6d32c1a1febc12a93 603 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 399 413 - T 09-03-2017 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 RG43_RS12585 f109cb5c9d33fee6d32c1a1febc12a93 603 SUPERFAMILY SSF49785 1 180 5.1E-58 T 09-03-2017 IPR008979 Galactose-binding domain-like RG43_RS12585 f109cb5c9d33fee6d32c1a1febc12a93 603 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 324 349 - T 09-03-2017 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 RG43_RS12585 f109cb5c9d33fee6d32c1a1febc12a93 603 PRINTS PR00132 Glycosyl hydrolase family 2 signature 91 106 1.3E-17 T 09-03-2017 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 RG43_RS12585 f109cb5c9d33fee6d32c1a1febc12a93 603 PRINTS PR00132 Glycosyl hydrolase family 2 signature 314 332 1.3E-17 T 09-03-2017 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 RG43_RS12585 f109cb5c9d33fee6d32c1a1febc12a93 603 PRINTS PR00132 Glycosyl hydrolase family 2 signature 399 414 1.3E-17 T 09-03-2017 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 RG43_RS12585 f109cb5c9d33fee6d32c1a1febc12a93 603 PRINTS PR00132 Glycosyl hydrolase family 2 signature 283 297 1.3E-17 T 09-03-2017 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 RG43_RS12585 f109cb5c9d33fee6d32c1a1febc12a93 603 PRINTS PR00132 Glycosyl hydrolase family 2 signature 498 513 1.3E-17 T 09-03-2017 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 RG43_RS12585 f109cb5c9d33fee6d32c1a1febc12a93 603 Gene3D G3DSA:2.60.120.260 2 180 2.5E-58 T 09-03-2017 IPR008979 Galactose-binding domain-like RG43_RS12585 f109cb5c9d33fee6d32c1a1febc12a93 603 Gene3D G3DSA:2.60.40.320 182 273 9.5E-27 T 09-03-2017 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 RG43_RS12585 f109cb5c9d33fee6d32c1a1febc12a93 603 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 12 180 5.5E-66 T 09-03-2017 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 RG43_RS12585 f109cb5c9d33fee6d32c1a1febc12a93 603 SUPERFAMILY SSF51445 274 590 5.8E-85 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily RG43_RS12585 f109cb5c9d33fee6d32c1a1febc12a93 603 Gene3D G3DSA:3.20.20.80 275 589 1.3E-79 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RG43_RS12585 f109cb5c9d33fee6d32c1a1febc12a93 603 Pfam PF00703 Glycosyl hydrolases family 2 184 272 2.4E-7 T 09-03-2017 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 RG43_RS12585 f109cb5c9d33fee6d32c1a1febc12a93 603 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 274 593 2.6E-111 T 09-03-2017 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 RG43_RS12585 f109cb5c9d33fee6d32c1a1febc12a93 603 SUPERFAMILY SSF49303 182 273 3.74E-20 T 09-03-2017 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 RG43_RS13830 126ad1abfb65f2dd030ff662495827dd 350 Pfam PF00107 Zinc-binding dehydrogenase 168 282 4.2E-26 T 09-03-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RG43_RS13830 126ad1abfb65f2dd030ff662495827dd 350 Gene3D G3DSA:3.90.180.10 1 92 1.4E-4 T 09-03-2017 IPR011032 GroES-like RG43_RS13830 126ad1abfb65f2dd030ff662495827dd 350 Gene3D G3DSA:3.90.180.10 93 161 3.9E-12 T 09-03-2017 IPR011032 GroES-like RG43_RS13830 126ad1abfb65f2dd030ff662495827dd 350 Gene3D G3DSA:3.40.50.720 162 281 1.0E-31 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS13830 126ad1abfb65f2dd030ff662495827dd 350 SUPERFAMILY SSF50129 1 167 1.12E-11 T 09-03-2017 IPR011032 GroES-like RG43_RS13830 126ad1abfb65f2dd030ff662495827dd 350 SMART SM00829 7 348 0.0079 T 09-03-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RG43_RS13830 126ad1abfb65f2dd030ff662495827dd 350 SUPERFAMILY SSF51735 136 284 2.23E-33 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS00575 224ef6339e08ac9eed06cfc1be8f99f8 374 Gene3D G3DSA:3.40.50.2000 154 347 7.3E-21 T 09-03-2017 RG43_RS00575 224ef6339e08ac9eed06cfc1be8f99f8 374 SUPERFAMILY SSF53756 3 354 6.85E-62 T 09-03-2017 RG43_RS00575 224ef6339e08ac9eed06cfc1be8f99f8 374 Pfam PF13439 Glycosyltransferase Family 4 13 173 3.1E-8 T 09-03-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 RG43_RS00575 224ef6339e08ac9eed06cfc1be8f99f8 374 Pfam PF00534 Glycosyl transferases group 1 183 350 1.6E-36 T 09-03-2017 IPR001296 Glycosyl transferase, family 1 RG43_RS05575 188a9c3fc4031be2e94cdf304e4a6cb2 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 09-03-2017 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 RG43_RS05575 188a9c3fc4031be2e94cdf304e4a6cb2 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 40.702 T 09-03-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 RG43_RS05575 188a9c3fc4031be2e94cdf304e4a6cb2 264 SUPERFAMILY SSF55831 1 264 1.83E-132 T 09-03-2017 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 RG43_RS05575 188a9c3fc4031be2e94cdf304e4a6cb2 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 1.6E-47 T 09-03-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 RG43_RS05575 188a9c3fc4031be2e94cdf304e4a6cb2 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 1.6E-47 T 09-03-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 RG43_RS05575 188a9c3fc4031be2e94cdf304e4a6cb2 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 1.6E-47 T 09-03-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 RG43_RS05575 188a9c3fc4031be2e94cdf304e4a6cb2 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 1.6E-47 T 09-03-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 RG43_RS05575 188a9c3fc4031be2e94cdf304e4a6cb2 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 1.6E-47 T 09-03-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 RG43_RS05575 188a9c3fc4031be2e94cdf304e4a6cb2 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 2.8E-42 T 09-03-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 RG43_RS05575 188a9c3fc4031be2e94cdf304e4a6cb2 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 8.1E-94 T 09-03-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 RG43_RS05575 188a9c3fc4031be2e94cdf304e4a6cb2 264 Gene3D G3DSA:3.30.572.10 1 264 5.3E-137 T 09-03-2017 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 RG43_RS05575 188a9c3fc4031be2e94cdf304e4a6cb2 264 Pfam PF00303 Thymidylate synthase 2 264 2.2E-125 T 09-03-2017 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 RG43_RS08995 4c1b368c2373f5fe9c66dc5e3db7dc5d 362 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 93 117 - T 09-03-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RG43_RS08995 4c1b368c2373f5fe9c66dc5e3db7dc5d 362 SUPERFAMILY SSF53613 61 340 3.43E-50 T 09-03-2017 IPR029056 Ribokinase-like RG43_RS08995 4c1b368c2373f5fe9c66dc5e3db7dc5d 362 SUPERFAMILY SSF46785 1 54 6.17E-8 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS08995 4c1b368c2373f5fe9c66dc5e3db7dc5d 362 Pfam PF00294 pfkB family carbohydrate kinase 58 348 2.0E-64 T 09-03-2017 IPR011611 Carbohydrate kinase PfkB RG43_RS08995 4c1b368c2373f5fe9c66dc5e3db7dc5d 362 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 1.5E-10 T 09-03-2017 RG43_RS08995 4c1b368c2373f5fe9c66dc5e3db7dc5d 362 Gene3D G3DSA:1.10.10.10 1 56 5.9E-9 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS08995 4c1b368c2373f5fe9c66dc5e3db7dc5d 362 Gene3D G3DSA:3.40.1190.20 60 339 6.5E-60 T 09-03-2017 IPR029056 Ribokinase-like RG43_RS02515 fb54b46e099986fda4e45ae22461e266 429 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 8 429 1.3E-195 T 09-03-2017 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RG43_RS02515 fb54b46e099986fda4e45ae22461e266 429 Gene3D G3DSA:3.40.50.150 233 429 3.3E-56 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS02515 fb54b46e099986fda4e45ae22461e266 429 SUPERFAMILY SSF53335 143 429 2.41E-76 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS02515 fb54b46e099986fda4e45ae22461e266 429 Pfam PF01189 16S rRNA methyltransferase RsmB/F 240 426 3.2E-80 T 09-03-2017 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RG43_RS02515 fb54b46e099986fda4e45ae22461e266 429 Pfam PF01029 NusB family 6 127 1.9E-25 T 09-03-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RG43_RS02515 fb54b46e099986fda4e45ae22461e266 429 Gene3D G3DSA:3.30.70.1170 173 230 1.9E-28 T 09-03-2017 RG43_RS02515 fb54b46e099986fda4e45ae22461e266 429 Gene3D G3DSA:1.10.287.730 148 172 5.9E-18 T 09-03-2017 RG43_RS02515 fb54b46e099986fda4e45ae22461e266 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 411 428 1.9E-31 T 09-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RG43_RS02515 fb54b46e099986fda4e45ae22461e266 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 317 329 1.9E-31 T 09-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RG43_RS02515 fb54b46e099986fda4e45ae22461e266 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 251 261 1.9E-31 T 09-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RG43_RS02515 fb54b46e099986fda4e45ae22461e266 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 222 236 1.9E-31 T 09-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RG43_RS02515 fb54b46e099986fda4e45ae22461e266 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 367 383 1.9E-31 T 09-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RG43_RS02515 fb54b46e099986fda4e45ae22461e266 429 SUPERFAMILY SSF48013 5 149 1.16E-35 T 09-03-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RG43_RS02515 fb54b46e099986fda4e45ae22461e266 429 Hamap MF_01856 Ribosomal RNA small subunit methyltransferase B [rsmB]. 1 429 74.405 T 09-03-2017 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RG43_RS02515 fb54b46e099986fda4e45ae22461e266 429 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 316 327 - T 09-03-2017 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RG43_RS02515 fb54b46e099986fda4e45ae22461e266 429 Gene3D G3DSA:1.10.940.10 2 147 4.0E-48 T 09-03-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RG43_RS16515 884b02de4ac5eda2661fff4f2d72b89c 271 ProSitePatterns PS01229 Hypothetical cof family signature 2. 213 235 - T 09-03-2017 RG43_RS16515 884b02de4ac5eda2661fff4f2d72b89c 271 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 259 1.5E-53 T 09-03-2017 IPR023214 HAD-like domain RG43_RS16515 884b02de4ac5eda2661fff4f2d72b89c 271 Gene3D G3DSA:3.40.50.1000 1 74 4.0E-48 T 09-03-2017 IPR023214 HAD-like domain RG43_RS16515 884b02de4ac5eda2661fff4f2d72b89c 271 Gene3D G3DSA:3.40.50.1000 179 264 4.0E-48 T 09-03-2017 IPR023214 HAD-like domain RG43_RS16515 884b02de4ac5eda2661fff4f2d72b89c 271 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 232 1.0E-20 T 09-03-2017 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 RG43_RS16515 884b02de4ac5eda2661fff4f2d72b89c 271 SUPERFAMILY SSF56784 1 262 2.32E-63 T 09-03-2017 IPR023214 HAD-like domain RG43_RS16515 884b02de4ac5eda2661fff4f2d72b89c 271 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 259 4.5E-66 T 09-03-2017 IPR000150 Cof protein GO:0016787 RG43_RS16515 884b02de4ac5eda2661fff4f2d72b89c 271 Gene3D G3DSA:3.30.1240.10 84 178 1.2E-33 T 09-03-2017 RG43_RS21655 ec9d968bc40d42032cb52ebca1d57d5c 239 SUPERFAMILY SSF53167 3 234 2.36E-94 T 09-03-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RG43_RS21655 ec9d968bc40d42032cb52ebca1d57d5c 239 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 09-03-2017 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 RG43_RS21655 ec9d968bc40d42032cb52ebca1d57d5c 239 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 5.1E-128 T 09-03-2017 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 RG43_RS21655 ec9d968bc40d42032cb52ebca1d57d5c 239 Pfam PF01048 Phosphorylase superfamily 15 218 2.1E-39 T 09-03-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RG43_RS21655 ec9d968bc40d42032cb52ebca1d57d5c 239 Gene3D G3DSA:3.40.50.1580 10 233 1.2E-83 T 09-03-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RG43_RS21655 ec9d968bc40d42032cb52ebca1d57d5c 239 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 52.534 T 09-03-2017 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 RG43_RS19755 8c87d33a87af9540d88d2501e46187b9 662 Gene3D G3DSA:3.40.50.300 425 557 2.0E-8 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS19755 8c87d33a87af9540d88d2501e46187b9 662 Gene3D G3DSA:3.40.50.300 168 369 1.0E-18 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS19755 8c87d33a87af9540d88d2501e46187b9 662 SUPERFAMILY SSF52540 276 385 5.73E-31 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS19755 8c87d33a87af9540d88d2501e46187b9 662 SUPERFAMILY SSF52540 161 236 5.73E-31 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS19755 8c87d33a87af9540d88d2501e46187b9 662 SUPERFAMILY SSF52540 419 527 5.73E-31 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS19755 8c87d33a87af9540d88d2501e46187b9 662 Pfam PF13538 UvrD-like helicase C-terminal domain 509 555 4.8E-10 T 09-03-2017 IPR027785 UvrD-like helicase C-terminal domain RG43_RS03760 364fcd01925b5c98a71f29fec4d70be1 948 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 356 393 3.4E-7 T 09-03-2017 IPR030930 Adhesin of bacterial autotransporter system RG43_RS03760 364fcd01925b5c98a71f29fec4d70be1 948 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 164 191 6.9E-5 T 09-03-2017 IPR030930 Adhesin of bacterial autotransporter system RG43_RS03760 364fcd01925b5c98a71f29fec4d70be1 948 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 338 374 2.3E-9 T 09-03-2017 IPR030930 Adhesin of bacterial autotransporter system RG43_RS03760 364fcd01925b5c98a71f29fec4d70be1 948 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 249 282 5.5E-9 T 09-03-2017 IPR030930 Adhesin of bacterial autotransporter system RG43_RS03760 364fcd01925b5c98a71f29fec4d70be1 948 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 128 162 2.2E-5 T 09-03-2017 IPR030930 Adhesin of bacterial autotransporter system RG43_RS03760 364fcd01925b5c98a71f29fec4d70be1 948 Pfam PF13018 Extended Signal Peptide of Type V secretion system 6 28 1.1E-7 T 09-03-2017 IPR024973 ESPR domain RG43_RS03760 364fcd01925b5c98a71f29fec4d70be1 948 Pfam PF03797 Autotransporter beta-domain 648 932 1.7E-62 T 09-03-2017 IPR005546 Autotransporter beta-domain RG43_RS03760 364fcd01925b5c98a71f29fec4d70be1 948 SUPERFAMILY SSF51126 144 611 1.19E-35 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor RG43_RS03760 364fcd01925b5c98a71f29fec4d70be1 948 Gene3D G3DSA:2.40.128.130 613 948 4.8E-53 T 09-03-2017 IPR005546 Autotransporter beta-domain RG43_RS03760 364fcd01925b5c98a71f29fec4d70be1 948 SMART SM00869 650 935 1.3E-19 T 09-03-2017 IPR005546 Autotransporter beta-domain RG43_RS03760 364fcd01925b5c98a71f29fec4d70be1 948 Gene3D G3DSA:2.160.20.20 65 611 4.0E-35 T 09-03-2017 IPR012332 P22 tailspike C-terminal domain-like RG43_RS03760 364fcd01925b5c98a71f29fec4d70be1 948 Pfam PF16168 Adhesin of bacterial autotransporter system, probable stalk 323 385 4.2E-21 T 09-03-2017 IPR030930 Adhesin of bacterial autotransporter system RG43_RS03760 364fcd01925b5c98a71f29fec4d70be1 948 Pfam PF16168 Adhesin of bacterial autotransporter system, probable stalk 396 458 1.6E-14 T 09-03-2017 IPR030930 Adhesin of bacterial autotransporter system RG43_RS03760 364fcd01925b5c98a71f29fec4d70be1 948 Pfam PF16168 Adhesin of bacterial autotransporter system, probable stalk 252 293 3.0E-8 T 09-03-2017 IPR030930 Adhesin of bacterial autotransporter system RG43_RS03760 364fcd01925b5c98a71f29fec4d70be1 948 Pfam PF16168 Adhesin of bacterial autotransporter system, probable stalk 143 191 2.7E-8 T 09-03-2017 IPR030930 Adhesin of bacterial autotransporter system RG43_RS03760 364fcd01925b5c98a71f29fec4d70be1 948 SUPERFAMILY SSF103515 621 948 8.5E-27 T 09-03-2017 IPR005546 Autotransporter beta-domain RG43_RS26135 364fcd01925b5c98a71f29fec4d70be1 948 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 356 393 3.4E-7 T 09-03-2017 IPR030930 Adhesin of bacterial autotransporter system RG43_RS26135 364fcd01925b5c98a71f29fec4d70be1 948 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 164 191 6.9E-5 T 09-03-2017 IPR030930 Adhesin of bacterial autotransporter system RG43_RS26135 364fcd01925b5c98a71f29fec4d70be1 948 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 338 374 2.3E-9 T 09-03-2017 IPR030930 Adhesin of bacterial autotransporter system RG43_RS26135 364fcd01925b5c98a71f29fec4d70be1 948 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 249 282 5.5E-9 T 09-03-2017 IPR030930 Adhesin of bacterial autotransporter system RG43_RS26135 364fcd01925b5c98a71f29fec4d70be1 948 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 128 162 2.2E-5 T 09-03-2017 IPR030930 Adhesin of bacterial autotransporter system RG43_RS26135 364fcd01925b5c98a71f29fec4d70be1 948 Pfam PF13018 Extended Signal Peptide of Type V secretion system 6 28 1.1E-7 T 09-03-2017 IPR024973 ESPR domain RG43_RS26135 364fcd01925b5c98a71f29fec4d70be1 948 Pfam PF03797 Autotransporter beta-domain 648 932 1.7E-62 T 09-03-2017 IPR005546 Autotransporter beta-domain RG43_RS26135 364fcd01925b5c98a71f29fec4d70be1 948 SUPERFAMILY SSF51126 144 611 1.19E-35 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor RG43_RS26135 364fcd01925b5c98a71f29fec4d70be1 948 Gene3D G3DSA:2.40.128.130 613 948 4.8E-53 T 09-03-2017 IPR005546 Autotransporter beta-domain RG43_RS26135 364fcd01925b5c98a71f29fec4d70be1 948 SMART SM00869 650 935 1.3E-19 T 09-03-2017 IPR005546 Autotransporter beta-domain RG43_RS26135 364fcd01925b5c98a71f29fec4d70be1 948 Gene3D G3DSA:2.160.20.20 65 611 4.0E-35 T 09-03-2017 IPR012332 P22 tailspike C-terminal domain-like RG43_RS26135 364fcd01925b5c98a71f29fec4d70be1 948 Pfam PF16168 Adhesin of bacterial autotransporter system, probable stalk 323 385 4.2E-21 T 09-03-2017 IPR030930 Adhesin of bacterial autotransporter system RG43_RS26135 364fcd01925b5c98a71f29fec4d70be1 948 Pfam PF16168 Adhesin of bacterial autotransporter system, probable stalk 396 458 1.6E-14 T 09-03-2017 IPR030930 Adhesin of bacterial autotransporter system RG43_RS26135 364fcd01925b5c98a71f29fec4d70be1 948 Pfam PF16168 Adhesin of bacterial autotransporter system, probable stalk 252 293 3.0E-8 T 09-03-2017 IPR030930 Adhesin of bacterial autotransporter system RG43_RS26135 364fcd01925b5c98a71f29fec4d70be1 948 Pfam PF16168 Adhesin of bacterial autotransporter system, probable stalk 143 191 2.7E-8 T 09-03-2017 IPR030930 Adhesin of bacterial autotransporter system RG43_RS26135 364fcd01925b5c98a71f29fec4d70be1 948 SUPERFAMILY SSF103515 621 948 8.5E-27 T 09-03-2017 IPR005546 Autotransporter beta-domain RG43_RS12035 45916890555801d87d58e0e9bacc14fc 180 SUPERFAMILY SSF54364 13 86 7.85E-29 T 09-03-2017 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 RG43_RS12035 45916890555801d87d58e0e9bacc14fc 180 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 9 179 30.82 T 09-03-2017 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 RG43_RS12035 45916890555801d87d58e0e9bacc14fc 180 SUPERFAMILY SSF55200 90 179 3.92E-35 T 09-03-2017 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 RG43_RS12035 45916890555801d87d58e0e9bacc14fc 180 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 91 177 8.4E-38 T 09-03-2017 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 RG43_RS12035 45916890555801d87d58e0e9bacc14fc 180 Gene3D G3DSA:3.30.110.10 87 179 1.6E-40 T 09-03-2017 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 RG43_RS12035 45916890555801d87d58e0e9bacc14fc 180 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 15 179 4.1E-78 T 09-03-2017 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 RG43_RS12035 45916890555801d87d58e0e9bacc14fc 180 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 15 84 8.3E-31 T 09-03-2017 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 RG43_RS12035 45916890555801d87d58e0e9bacc14fc 180 Gene3D G3DSA:3.10.20.80 13 86 1.2E-35 T 09-03-2017 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 RG43_RS12035 45916890555801d87d58e0e9bacc14fc 180 ProSitePatterns PS00938 Initiation factor 3 signature. 66 79 - T 09-03-2017 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 RG43_RS21005 6ad437c6258227e99ba583609f236310 146 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 1.8E-9 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS21005 6ad437c6258227e99ba583609f236310 146 Gene3D G3DSA:3.30.700.10 7 135 9.2E-33 T 09-03-2017 RG43_RS21005 6ad437c6258227e99ba583609f236310 146 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS21005 6ad437c6258227e99ba583609f236310 146 SUPERFAMILY SSF54523 7 113 1.05E-22 T 09-03-2017 RG43_RS21005 6ad437c6258227e99ba583609f236310 146 Pfam PF13633 Prokaryotic N-terminal methylation site 4 30 5.0E-11 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS10200 d75314c708471715ee8e4e7f75fb7db9 600 SUPERFAMILY SSF90123 17 334 2.88E-37 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RG43_RS10200 d75314c708471715ee8e4e7f75fb7db9 600 Gene3D G3DSA:1.20.1560.10 17 331 1.9E-34 T 09-03-2017 RG43_RS10200 d75314c708471715ee8e4e7f75fb7db9 600 ProSitePatterns PS00211 ABC transporters family signature. 482 496 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS10200 d75314c708471715ee8e4e7f75fb7db9 600 SUPERFAMILY SSF52540 339 581 1.01E-85 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS10200 d75314c708471715ee8e4e7f75fb7db9 600 Gene3D G3DSA:3.40.50.300 344 575 3.0E-75 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS10200 d75314c708471715ee8e4e7f75fb7db9 600 Pfam PF00664 ABC transporter transmembrane region 34 291 4.0E-7 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RG43_RS10200 d75314c708471715ee8e4e7f75fb7db9 600 SMART SM00382 370 562 6.0E-13 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS10200 d75314c708471715ee8e4e7f75fb7db9 600 Pfam PF00005 ABC transporter 361 510 1.9E-29 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS18435 bc1e5610375e5b8c177351ff78cf0a56 160 Pfam PF04115 Ureidoglycolate lyase 2 154 1.2E-45 T 09-03-2017 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 RG43_RS18435 bc1e5610375e5b8c177351ff78cf0a56 160 Gene3D G3DSA:2.60.120.480 2 155 5.2E-53 T 09-03-2017 IPR024060 Ureidoglycolate lyase domain GO:0004848 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 RG43_RS18435 bc1e5610375e5b8c177351ff78cf0a56 160 PIRSF PIRSF017306 1 160 5.7E-109 T 09-03-2017 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 RG43_RS18435 bc1e5610375e5b8c177351ff78cf0a56 160 SUPERFAMILY SSF51182 2 156 2.0E-54 T 09-03-2017 IPR011051 RmlC-like cupin domain RG43_RS18435 bc1e5610375e5b8c177351ff78cf0a56 160 Hamap MF_00616 Ureidoglycolate lyase [allA]. 1 160 37.868 T 09-03-2017 IPR023525 Ureidoglycolate lyase, bacterial GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 RG43_RS05990 7f5c91e463a43202f092c31b8b4ef6a7 259 SUPERFAMILY SSF52402 1 248 8.37E-37 T 09-03-2017 RG43_RS05990 7f5c91e463a43202f092c31b8b4ef6a7 259 Pfam PF01012 Electron transfer flavoprotein domain 47 214 5.5E-19 T 09-03-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 RG43_RS05990 7f5c91e463a43202f092c31b8b4ef6a7 259 SMART SM00893 30 212 2.3E-5 T 09-03-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 RG43_RS05990 7f5c91e463a43202f092c31b8b4ef6a7 259 Gene3D G3DSA:3.40.50.620 1 250 1.2E-43 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS05990 7f5c91e463a43202f092c31b8b4ef6a7 259 PIRSF PIRSF000090 1 258 4.1E-46 T 09-03-2017 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105 RG43_RS06675 f5a64710e99eaf586d30566f0129af5e 115 SUPERFAMILY SSF50104 2 114 5.52E-48 T 09-03-2017 IPR008991 Translation protein SH3-like domain RG43_RS06675 f5a64710e99eaf586d30566f0129af5e 115 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 09-03-2017 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS06675 f5a64710e99eaf586d30566f0129af5e 115 PRINTS PR00061 Ribosomal protein L19 signature 34 63 9.8E-43 T 09-03-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS06675 f5a64710e99eaf586d30566f0129af5e 115 PRINTS PR00061 Ribosomal protein L19 signature 4 33 9.8E-43 T 09-03-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS06675 f5a64710e99eaf586d30566f0129af5e 115 PRINTS PR00061 Ribosomal protein L19 signature 88 113 9.8E-43 T 09-03-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS06675 f5a64710e99eaf586d30566f0129af5e 115 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 1.3E-53 T 09-03-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS06675 f5a64710e99eaf586d30566f0129af5e 115 Pfam PF01245 Ribosomal protein L19 3 113 3.7E-50 T 09-03-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS06675 f5a64710e99eaf586d30566f0129af5e 115 PIRSF PIRSF002191 1 115 1.1E-50 T 09-03-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS06675 f5a64710e99eaf586d30566f0129af5e 115 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 30.739 T 09-03-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS12970 46a7276fc9aca2a295e43428e7444634 317 Gene3D G3DSA:3.40.50.1360 73 316 2.2E-68 T 09-03-2017 RG43_RS12970 46a7276fc9aca2a295e43428e7444634 317 Pfam PF04198 Putative sugar-binding domain 67 316 2.7E-73 T 09-03-2017 IPR007324 Sugar-binding domain, putative GO:0030246 RG43_RS12970 46a7276fc9aca2a295e43428e7444634 317 Gene3D G3DSA:1.10.10.10 31 63 2.0E-5 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS12970 46a7276fc9aca2a295e43428e7444634 317 SUPERFAMILY SSF100950 70 315 1.67E-58 T 09-03-2017 RG43_RS02235 ad10a0ee24ef3a18c0967b9aa0cd4042 128 Gene3D G3DSA:3.40.1260.10 1 128 1.3E-31 T 09-03-2017 IPR027396 DsrEFH-like RG43_RS02235 ad10a0ee24ef3a18c0967b9aa0cd4042 128 Hamap MF_00390 Sulfurtransferase TusD [tusD]. 1 128 41.004 T 09-03-2017 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 RG43_RS02235 ad10a0ee24ef3a18c0967b9aa0cd4042 128 Pfam PF02635 DsrE/DsrF-like family 1 128 1.5E-29 T 09-03-2017 IPR003787 Sulphur relay, DsrE/F-like protein RG43_RS02235 ad10a0ee24ef3a18c0967b9aa0cd4042 128 SUPERFAMILY SSF75169 1 128 4.12E-39 T 09-03-2017 IPR027396 DsrEFH-like RG43_RS02235 ad10a0ee24ef3a18c0967b9aa0cd4042 128 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 2 128 8.5E-55 T 09-03-2017 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 RG43_RS26725 efd84474d439cf9155c3a22eab8f6422 304 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 198 1.4E-20 T 09-03-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RG43_RS26725 efd84474d439cf9155c3a22eab8f6422 304 Gene3D G3DSA:3.40.50.720 2 211 1.8E-45 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS26725 efd84474d439cf9155c3a22eab8f6422 304 SUPERFAMILY SSF51735 268 300 3.52E-52 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS26725 efd84474d439cf9155c3a22eab8f6422 304 SUPERFAMILY SSF51735 1 241 3.52E-52 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS04350 efd84474d439cf9155c3a22eab8f6422 304 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 198 1.4E-20 T 09-03-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RG43_RS04350 efd84474d439cf9155c3a22eab8f6422 304 Gene3D G3DSA:3.40.50.720 2 211 1.8E-45 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS04350 efd84474d439cf9155c3a22eab8f6422 304 SUPERFAMILY SSF51735 268 300 3.52E-52 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS04350 efd84474d439cf9155c3a22eab8f6422 304 SUPERFAMILY SSF51735 1 241 3.52E-52 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS26820 429656fb8457b6ea9929d663fb9367a8 187 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 22 7.1E-5 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS26820 429656fb8457b6ea9929d663fb9367a8 187 Pfam PF12019 Type II transport protein GspH 40 175 6.0E-10 T 09-03-2017 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 RG43_RS26820 429656fb8457b6ea9929d663fb9367a8 187 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 3 170 4.1E-15 T 09-03-2017 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 RG43_RS26820 429656fb8457b6ea9929d663fb9367a8 187 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 2.1E-5 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS26820 429656fb8457b6ea9929d663fb9367a8 187 PRINTS PR00885 Bacterial general secretion pathway protein H signature 1 15 4.8E-11 T 09-03-2017 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 RG43_RS26820 429656fb8457b6ea9929d663fb9367a8 187 PRINTS PR00885 Bacterial general secretion pathway protein H signature 16 30 4.8E-11 T 09-03-2017 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 RG43_RS26820 429656fb8457b6ea9929d663fb9367a8 187 PRINTS PR00885 Bacterial general secretion pathway protein H signature 141 156 4.8E-11 T 09-03-2017 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 RG43_RS26820 429656fb8457b6ea9929d663fb9367a8 187 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS26820 429656fb8457b6ea9929d663fb9367a8 187 SUPERFAMILY SSF54523 6 96 4.16E-10 T 09-03-2017 RG43_RS26820 429656fb8457b6ea9929d663fb9367a8 187 Gene3D G3DSA:3.55.40.10 37 186 3.8E-43 T 09-03-2017 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 RG43_RS04445 429656fb8457b6ea9929d663fb9367a8 187 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 22 7.1E-5 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS04445 429656fb8457b6ea9929d663fb9367a8 187 Pfam PF12019 Type II transport protein GspH 40 175 6.0E-10 T 09-03-2017 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 RG43_RS04445 429656fb8457b6ea9929d663fb9367a8 187 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 3 170 4.1E-15 T 09-03-2017 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 RG43_RS04445 429656fb8457b6ea9929d663fb9367a8 187 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 2.1E-5 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS04445 429656fb8457b6ea9929d663fb9367a8 187 PRINTS PR00885 Bacterial general secretion pathway protein H signature 1 15 4.8E-11 T 09-03-2017 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 RG43_RS04445 429656fb8457b6ea9929d663fb9367a8 187 PRINTS PR00885 Bacterial general secretion pathway protein H signature 16 30 4.8E-11 T 09-03-2017 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 RG43_RS04445 429656fb8457b6ea9929d663fb9367a8 187 PRINTS PR00885 Bacterial general secretion pathway protein H signature 141 156 4.8E-11 T 09-03-2017 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 RG43_RS04445 429656fb8457b6ea9929d663fb9367a8 187 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS04445 429656fb8457b6ea9929d663fb9367a8 187 SUPERFAMILY SSF54523 6 96 4.16E-10 T 09-03-2017 RG43_RS04445 429656fb8457b6ea9929d663fb9367a8 187 Gene3D G3DSA:3.55.40.10 37 186 3.8E-43 T 09-03-2017 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 RG43_RS15865 6eb2a6ab53764685b5c04535b0c9a998 369 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 296 362 7.1E-14 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RG43_RS15865 6eb2a6ab53764685b5c04535b0c9a998 369 Gene3D G3DSA:3.10.20.30 279 367 8.6E-22 T 09-03-2017 IPR012675 Beta-grasp domain RG43_RS15865 6eb2a6ab53764685b5c04535b0c9a998 369 Pfam PF03473 MOSC domain 139 262 5.8E-31 T 09-03-2017 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 RG43_RS15865 6eb2a6ab53764685b5c04535b0c9a998 369 SUPERFAMILY SSF50800 147 264 1.46E-17 T 09-03-2017 IPR011037 Pyruvate kinase-like, insert domain RG43_RS15865 6eb2a6ab53764685b5c04535b0c9a998 369 SUPERFAMILY SSF50800 2 50 1.46E-17 T 09-03-2017 IPR011037 Pyruvate kinase-like, insert domain RG43_RS15865 6eb2a6ab53764685b5c04535b0c9a998 369 Pfam PF03476 MOSC N-terminal beta barrel domain 2 116 1.7E-29 T 09-03-2017 IPR005303 MOSC, N-terminal beta barrel RG43_RS15865 6eb2a6ab53764685b5c04535b0c9a998 369 SUPERFAMILY SSF54292 284 367 6.82E-20 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RG43_RS15865 6eb2a6ab53764685b5c04535b0c9a998 369 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 323 331 - T 09-03-2017 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 RG43_RS15865 6eb2a6ab53764685b5c04535b0c9a998 369 SUPERFAMILY SSF141673 4 132 7.98E-28 T 09-03-2017 RG43_RS07170 e41caca103bb043bc9e5f268eb148771 281 ProSitePatterns PS00683 Rhodanese C-terminal signature. 259 269 - T 09-03-2017 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 RG43_RS07170 e41caca103bb043bc9e5f268eb148771 281 Gene3D G3DSA:3.40.250.10 1 151 1.7E-47 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS07170 e41caca103bb043bc9e5f268eb148771 281 SUPERFAMILY SSF52821 1 152 1.57E-41 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS07170 e41caca103bb043bc9e5f268eb148771 281 Gene3D G3DSA:3.40.250.10 152 280 2.0E-42 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS07170 e41caca103bb043bc9e5f268eb148771 281 SMART SM00450 155 275 1.1E-24 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS07170 e41caca103bb043bc9e5f268eb148771 281 SMART SM00450 7 132 9.3E-28 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS07170 e41caca103bb043bc9e5f268eb148771 281 SUPERFAMILY SSF52821 165 279 1.7E-33 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS07170 e41caca103bb043bc9e5f268eb148771 281 Pfam PF00581 Rhodanese-like domain 9 128 1.8E-18 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS07170 e41caca103bb043bc9e5f268eb148771 281 Pfam PF00581 Rhodanese-like domain 165 270 1.5E-13 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS07170 e41caca103bb043bc9e5f268eb148771 281 ProSitePatterns PS00380 Rhodanese signature 1. 42 53 - T 09-03-2017 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 RG43_RS20060 41152f3b897fccdae67b5d01d9f3900c 351 Pfam PF11799 impB/mucB/samB family C-terminal domain 237 346 3.4E-9 T 09-03-2017 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 RG43_RS20060 41152f3b897fccdae67b5d01d9f3900c 351 Pfam PF00817 impB/mucB/samB family 7 154 2.8E-49 T 09-03-2017 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 RG43_RS20060 41152f3b897fccdae67b5d01d9f3900c 351 SUPERFAMILY SSF56672 1 234 2.13E-94 T 09-03-2017 RG43_RS20060 41152f3b897fccdae67b5d01d9f3900c 351 Pfam PF11798 IMS family HHH motif 166 197 5.7E-8 T 09-03-2017 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 RG43_RS20060 41152f3b897fccdae67b5d01d9f3900c 351 Gene3D G3DSA:3.30.1490.100 238 349 2.4E-44 T 09-03-2017 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 RG43_RS20060 41152f3b897fccdae67b5d01d9f3900c 351 Gene3D G3DSA:3.30.70.270 66 164 8.4E-37 T 09-03-2017 RG43_RS20060 41152f3b897fccdae67b5d01d9f3900c 351 Gene3D G3DSA:1.10.150.20 165 237 8.7E-26 T 09-03-2017 RG43_RS20060 41152f3b897fccdae67b5d01d9f3900c 351 SUPERFAMILY SSF100879 241 349 5.69E-27 T 09-03-2017 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 RG43_RS20060 41152f3b897fccdae67b5d01d9f3900c 351 Hamap MF_01113 DNA polymerase IV [dinB]. 1 349 37.25 T 09-03-2017 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 RG43_RS26655 3799010f2d3257da5915e46316f35c2e 82 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 1.4E-24 T 09-03-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC RG43_RS26655 3799010f2d3257da5915e46316f35c2e 82 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 45 61 1.4E-24 T 09-03-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC RG43_RS26655 3799010f2d3257da5915e46316f35c2e 82 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 20 36 1.4E-24 T 09-03-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC RG43_RS26655 3799010f2d3257da5915e46316f35c2e 82 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 63 75 1.4E-24 T 09-03-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC RG43_RS26655 3799010f2d3257da5915e46316f35c2e 82 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 78 9.0E-30 T 09-03-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC RG43_RS26655 3799010f2d3257da5915e46316f35c2e 82 SUPERFAMILY SSF159127 1 76 9.55E-24 T 09-03-2017 RG43_RS26655 3799010f2d3257da5915e46316f35c2e 82 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 09-03-2017 IPR019812 Hydrogenase assembly chaperone, conserved site RG43_RS26655 3799010f2d3257da5915e46316f35c2e 82 Pfam PF01455 HupF/HypC family 1 72 4.0E-25 T 09-03-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC RG43_RS04280 3799010f2d3257da5915e46316f35c2e 82 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 1.4E-24 T 09-03-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC RG43_RS04280 3799010f2d3257da5915e46316f35c2e 82 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 45 61 1.4E-24 T 09-03-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC RG43_RS04280 3799010f2d3257da5915e46316f35c2e 82 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 20 36 1.4E-24 T 09-03-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC RG43_RS04280 3799010f2d3257da5915e46316f35c2e 82 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 63 75 1.4E-24 T 09-03-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC RG43_RS04280 3799010f2d3257da5915e46316f35c2e 82 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 78 9.0E-30 T 09-03-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC RG43_RS04280 3799010f2d3257da5915e46316f35c2e 82 SUPERFAMILY SSF159127 1 76 9.55E-24 T 09-03-2017 RG43_RS04280 3799010f2d3257da5915e46316f35c2e 82 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 09-03-2017 IPR019812 Hydrogenase assembly chaperone, conserved site RG43_RS04280 3799010f2d3257da5915e46316f35c2e 82 Pfam PF01455 HupF/HypC family 1 72 4.0E-25 T 09-03-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC RG43_RS25195 5f64f20b122d3cca85ace90f05c51400 293 Gene3D G3DSA:3.90.550.10 1 264 1.0E-65 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS25195 5f64f20b122d3cca85ace90f05c51400 293 Pfam PF00483 Nucleotidyl transferase 2 238 1.1E-72 T 09-03-2017 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 RG43_RS25195 5f64f20b122d3cca85ace90f05c51400 293 SUPERFAMILY SSF53448 1 286 3.83E-92 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS25195 5f64f20b122d3cca85ace90f05c51400 293 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 1.3E-161 T 09-03-2017 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 RG43_RS07105 ccdb8a845e15184007f49a2366f7bc56 267 SUPERFAMILY SSF56655 1 261 2.36E-86 T 09-03-2017 RG43_RS07105 ccdb8a845e15184007f49a2366f7bc56 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 09-03-2017 IPR020583 Inositol monophosphatase, metal-binding site RG43_RS07105 ccdb8a845e15184007f49a2366f7bc56 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 09-03-2017 IPR020550 Inositol monophosphatase, conserved site GO:0046854 RG43_RS07105 ccdb8a845e15184007f49a2366f7bc56 267 Gene3D G3DSA:3.40.190.80 153 259 9.7E-39 T 09-03-2017 RG43_RS07105 ccdb8a845e15184007f49a2366f7bc56 267 Pfam PF00459 Inositol monophosphatase family 2 259 1.4E-74 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 RG43_RS07105 ccdb8a845e15184007f49a2366f7bc56 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 1.6E-62 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 RG43_RS07105 ccdb8a845e15184007f49a2366f7bc56 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 1.6E-62 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 RG43_RS07105 ccdb8a845e15184007f49a2366f7bc56 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 1.6E-62 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 RG43_RS07105 ccdb8a845e15184007f49a2366f7bc56 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 1.6E-62 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 RG43_RS07105 ccdb8a845e15184007f49a2366f7bc56 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 1.6E-62 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 RG43_RS07105 ccdb8a845e15184007f49a2366f7bc56 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 1.6E-62 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 RG43_RS07105 ccdb8a845e15184007f49a2366f7bc56 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 1.0E-36 T 09-03-2017 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 RG43_RS07105 ccdb8a845e15184007f49a2366f7bc56 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 1.0E-36 T 09-03-2017 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 RG43_RS07105 ccdb8a845e15184007f49a2366f7bc56 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 1.0E-36 T 09-03-2017 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 RG43_RS07105 ccdb8a845e15184007f49a2366f7bc56 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 1.0E-36 T 09-03-2017 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 RG43_RS07105 ccdb8a845e15184007f49a2366f7bc56 267 Gene3D G3DSA:3.30.540.10 2 152 7.1E-54 T 09-03-2017 RG43_RS05625 9668def832419d1fce3e7a25f8ba9d01 447 Gene3D G3DSA:3.40.630.40 218 315 8.4E-60 T 09-03-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 RG43_RS05625 9668def832419d1fce3e7a25f8ba9d01 447 Gene3D G3DSA:3.40.630.40 362 437 8.4E-60 T 09-03-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 RG43_RS05625 9668def832419d1fce3e7a25f8ba9d01 447 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 220 434 1.4E-50 T 09-03-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 RG43_RS05625 9668def832419d1fce3e7a25f8ba9d01 447 SMART SM00646 280 434 3.8E-68 T 09-03-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 RG43_RS05625 9668def832419d1fce3e7a25f8ba9d01 447 Pfam PF11741 AMIN domain 69 172 1.2E-26 T 09-03-2017 IPR021731 AMIN domain RG43_RS05625 9668def832419d1fce3e7a25f8ba9d01 447 SUPERFAMILY SSF53187 218 314 1.16E-52 T 09-03-2017 RG43_RS05625 9668def832419d1fce3e7a25f8ba9d01 447 SUPERFAMILY SSF53187 361 437 1.16E-52 T 09-03-2017 RG43_RS21475 0d39280bf6256e4ebfb5b40449c56b29 638 SUPERFAMILY SSF53067 187 382 5.12E-69 T 09-03-2017 RG43_RS21475 0d39280bf6256e4ebfb5b40449c56b29 638 SUPERFAMILY SSF100934 507 602 6.54E-31 T 09-03-2017 IPR029048 Heat shock protein 70kD, C-terminal domain Reactome: R-HSA-3371453 RG43_RS21475 0d39280bf6256e4ebfb5b40449c56b29 638 Gene3D G3DSA:3.30.420.40 319 361 8.5E-34 T 09-03-2017 RG43_RS21475 0d39280bf6256e4ebfb5b40449c56b29 638 Gene3D G3DSA:3.30.420.40 197 229 8.5E-34 T 09-03-2017 RG43_RS21475 0d39280bf6256e4ebfb5b40449c56b29 638 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 634 37.27 T 09-03-2017 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453 RG43_RS21475 0d39280bf6256e4ebfb5b40449c56b29 638 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 09-03-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 RG43_RS21475 0d39280bf6256e4ebfb5b40449c56b29 638 Gene3D G3DSA:3.30.420.40 4 52 1.2E-63 T 09-03-2017 RG43_RS21475 0d39280bf6256e4ebfb5b40449c56b29 638 Gene3D G3DSA:3.30.420.40 119 196 1.2E-63 T 09-03-2017 RG43_RS21475 0d39280bf6256e4ebfb5b40449c56b29 638 Gene3D G3DSA:3.30.30.30 53 108 1.7E-28 T 09-03-2017 RG43_RS21475 0d39280bf6256e4ebfb5b40449c56b29 638 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 09-03-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 RG43_RS21475 0d39280bf6256e4ebfb5b40449c56b29 638 PRINTS PR00301 70kDa heat shock protein signature 334 350 6.0E-81 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RG43_RS21475 0d39280bf6256e4ebfb5b40449c56b29 638 PRINTS PR00301 70kDa heat shock protein signature 469 485 6.0E-81 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RG43_RS21475 0d39280bf6256e4ebfb5b40449c56b29 638 PRINTS PR00301 70kDa heat shock protein signature 138 158 6.0E-81 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RG43_RS21475 0d39280bf6256e4ebfb5b40449c56b29 638 PRINTS PR00301 70kDa heat shock protein signature 198 208 6.0E-81 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RG43_RS21475 0d39280bf6256e4ebfb5b40449c56b29 638 PRINTS PR00301 70kDa heat shock protein signature 31 43 6.0E-81 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RG43_RS21475 0d39280bf6256e4ebfb5b40449c56b29 638 PRINTS PR00301 70kDa heat shock protein signature 54 62 6.0E-81 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RG43_RS21475 0d39280bf6256e4ebfb5b40449c56b29 638 PRINTS PR00301 70kDa heat shock protein signature 3 16 6.0E-81 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RG43_RS21475 0d39280bf6256e4ebfb5b40449c56b29 638 PRINTS PR00301 70kDa heat shock protein signature 388 407 6.0E-81 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RG43_RS21475 0d39280bf6256e4ebfb5b40449c56b29 638 PRINTS PR00301 70kDa heat shock protein signature 365 385 6.0E-81 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RG43_RS21475 0d39280bf6256e4ebfb5b40449c56b29 638 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 603 6.3E-294 T 09-03-2017 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453 RG43_RS21475 0d39280bf6256e4ebfb5b40449c56b29 638 SUPERFAMILY SSF100920 384 539 1.29E-61 T 09-03-2017 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 RG43_RS21475 0d39280bf6256e4ebfb5b40449c56b29 638 SUPERFAMILY SSF53067 4 183 3.56E-66 T 09-03-2017 RG43_RS21475 0d39280bf6256e4ebfb5b40449c56b29 638 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 09-03-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 RG43_RS21475 0d39280bf6256e4ebfb5b40449c56b29 638 Gene3D G3DSA:1.20.1270.10 532 601 1.1E-28 T 09-03-2017 IPR029048 Heat shock protein 70kD, C-terminal domain Reactome: R-HSA-3371453 RG43_RS21475 0d39280bf6256e4ebfb5b40449c56b29 638 Gene3D G3DSA:3.90.640.10 230 315 5.3E-32 T 09-03-2017 RG43_RS21475 0d39280bf6256e4ebfb5b40449c56b29 638 Gene3D G3DSA:2.60.34.10 390 531 1.0E-70 T 09-03-2017 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 RG43_RS21475 0d39280bf6256e4ebfb5b40449c56b29 638 Pfam PF00012 Hsp70 protein 4 602 2.6E-270 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RG43_RS14150 5711dd620597984b8fa3457b3bf8dd76 531 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 204 528 8.3E-130 T 09-03-2017 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 RG43_RS14150 5711dd620597984b8fa3457b3bf8dd76 531 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 1.3E-12 T 09-03-2017 RG43_RS14150 5711dd620597984b8fa3457b3bf8dd76 531 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 1.3E-12 T 09-03-2017 RG43_RS14150 5711dd620597984b8fa3457b3bf8dd76 531 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 1.3E-12 T 09-03-2017 RG43_RS14150 5711dd620597984b8fa3457b3bf8dd76 531 Gene3D G3DSA:1.20.970.10 201 267 3.0E-27 T 09-03-2017 RG43_RS14150 5711dd620597984b8fa3457b3bf8dd76 531 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 5.4E-5 T 09-03-2017 RG43_RS14150 5711dd620597984b8fa3457b3bf8dd76 531 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 5.4E-5 T 09-03-2017 RG43_RS14150 5711dd620597984b8fa3457b3bf8dd76 531 SUPERFAMILY SSF52317 3 191 3.12E-44 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like RG43_RS14150 5711dd620597984b8fa3457b3bf8dd76 531 SUPERFAMILY SSF47648 200 266 4.45E-16 T 09-03-2017 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 RG43_RS14150 5711dd620597984b8fa3457b3bf8dd76 531 Gene3D G3DSA:3.40.1030.10 273 528 3.3E-97 T 09-03-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RG43_RS14150 5711dd620597984b8fa3457b3bf8dd76 531 Pfam PF00117 Glutamine amidotransferase class-I 6 186 2.4E-43 T 09-03-2017 IPR017926 Glutamine amidotransferase RG43_RS14150 5711dd620597984b8fa3457b3bf8dd76 531 Gene3D G3DSA:3.40.50.880 3 192 8.2E-53 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like RG43_RS14150 5711dd620597984b8fa3457b3bf8dd76 531 Pfam PF02885 Glycosyl transferase family, helical bundle domain 202 262 1.5E-14 T 09-03-2017 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 RG43_RS14150 5711dd620597984b8fa3457b3bf8dd76 531 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 202 530 38.697 T 09-03-2017 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 RG43_RS14150 5711dd620597984b8fa3457b3bf8dd76 531 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 186 5.8E-54 T 09-03-2017 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 RG43_RS14150 5711dd620597984b8fa3457b3bf8dd76 531 PRINTS PR00097 Anthranilate synthase component II signature 4 18 3.4E-33 T 09-03-2017 RG43_RS14150 5711dd620597984b8fa3457b3bf8dd76 531 PRINTS PR00097 Anthranilate synthase component II signature 79 90 3.4E-33 T 09-03-2017 RG43_RS14150 5711dd620597984b8fa3457b3bf8dd76 531 PRINTS PR00097 Anthranilate synthase component II signature 124 136 3.4E-33 T 09-03-2017 RG43_RS14150 5711dd620597984b8fa3457b3bf8dd76 531 PRINTS PR00097 Anthranilate synthase component II signature 52 61 3.4E-33 T 09-03-2017 RG43_RS14150 5711dd620597984b8fa3457b3bf8dd76 531 PRINTS PR00097 Anthranilate synthase component II signature 104 112 3.4E-33 T 09-03-2017 RG43_RS14150 5711dd620597984b8fa3457b3bf8dd76 531 PRINTS PR00097 Anthranilate synthase component II signature 166 179 3.4E-33 T 09-03-2017 RG43_RS14150 5711dd620597984b8fa3457b3bf8dd76 531 SUPERFAMILY SSF52418 269 527 1.3E-91 T 09-03-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RG43_RS14150 5711dd620597984b8fa3457b3bf8dd76 531 Pfam PF00591 Glycosyl transferase family, a/b domain 273 521 8.0E-102 T 09-03-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RG43_RS00905 f693721b1802441be1f436ea090d868f 513 SMART SM00382 29 219 2.0E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS00905 f693721b1802441be1f436ea090d868f 513 SMART SM00382 286 482 2.0E-6 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS00905 f693721b1802441be1f436ea090d868f 513 Gene3D G3DSA:3.40.50.300 3 233 1.2E-59 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS00905 f693721b1802441be1f436ea090d868f 513 SUPERFAMILY SSF52540 3 228 4.05E-55 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS00905 f693721b1802441be1f436ea090d868f 513 SUPERFAMILY SSF52540 241 485 6.27E-47 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS00905 f693721b1802441be1f436ea090d868f 513 TIGRFAM TIGR02633 xylG: D-xylose ABC transporter, ATP-binding protein 4 502 5.4E-291 T 09-03-2017 IPR013455 ABC transporter, D-xylose, ATP-binding protein GO:0005524|GO:0015614|GO:0015753|GO:0016020 RG43_RS00905 f693721b1802441be1f436ea090d868f 513 ProSitePatterns PS00211 ABC transporters family signature. 406 420 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS00905 f693721b1802441be1f436ea090d868f 513 Gene3D G3DSA:3.40.50.300 249 504 3.8E-52 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS00905 f693721b1802441be1f436ea090d868f 513 Pfam PF00005 ABC transporter 21 171 5.7E-30 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS00905 f693721b1802441be1f436ea090d868f 513 Pfam PF00005 ABC transporter 278 433 4.5E-21 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS09780 115d5a4081836103ad363b4a5bd0f9dd 16 Pfam PF08047 Histidine operon leader peptide 1 16 4.4E-10 T 09-03-2017 IPR012565 Histidine operon leader peptide GO:0000105 RG43_RS10225 92b2ce2706e407fa6ede9ac98ec5ea9e 265 Hamap MF_01593 Protein MtfA [mtfA]. 1 265 63.466 T 09-03-2017 IPR010384 MtfA family RG43_RS10225 92b2ce2706e407fa6ede9ac98ec5ea9e 265 Pfam PF06167 Glucose-regulated metallo-peptidase M90 16 243 6.2E-62 T 09-03-2017 IPR010384 MtfA family RG43_RS10225 92b2ce2706e407fa6ede9ac98ec5ea9e 265 Gene3D G3DSA:3.40.390.10 30 244 2.3E-25 T 09-03-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 RG43_RS10225 92b2ce2706e407fa6ede9ac98ec5ea9e 265 SUPERFAMILY SSF55486 33 245 2.27E-39 T 09-03-2017 RG43_RS08430 c1128b0ec3de53892191f41ca308e4be 153 Gene3D G3DSA:3.40.630.30 2 148 1.9E-47 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS08430 c1128b0ec3de53892191f41ca308e4be 153 SUPERFAMILY SSF55729 1 150 2.96E-33 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS08430 c1128b0ec3de53892191f41ca308e4be 153 Pfam PF13673 Acetyltransferase (GNAT) domain 43 149 8.6E-17 T 09-03-2017 IPR000182 GNAT domain GO:0008080 RG43_RS16230 205ea81ac40fba0b08bbc60666ff4664 231 Hamap MF_01146 Aquaporin Z [aqpZ]. 2 230 35.766 T 09-03-2017 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 RG43_RS16230 205ea81ac40fba0b08bbc60666ff4664 231 ProSitePatterns PS00221 MIP family signature. 61 69 - T 09-03-2017 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 RG43_RS16230 205ea81ac40fba0b08bbc60666ff4664 231 SUPERFAMILY SSF81338 2 228 6.93E-67 T 09-03-2017 IPR023271 Aquaporin-like Reactome: R-HSA-432047 RG43_RS16230 205ea81ac40fba0b08bbc60666ff4664 231 Pfam PF00230 Major intrinsic protein 2 223 5.5E-50 T 09-03-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 RG43_RS16230 205ea81ac40fba0b08bbc60666ff4664 231 Gene3D G3DSA:1.20.1080.10 2 229 1.0E-67 T 09-03-2017 IPR023271 Aquaporin-like Reactome: R-HSA-432047 RG43_RS16230 205ea81ac40fba0b08bbc60666ff4664 231 TIGRFAM TIGR00861 MIP: MIP family channel proteins 7 223 5.8E-64 T 09-03-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 RG43_RS16230 205ea81ac40fba0b08bbc60666ff4664 231 PRINTS PR00783 Major intrinsic protein family signature 167 189 6.5E-49 T 09-03-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 RG43_RS16230 205ea81ac40fba0b08bbc60666ff4664 231 PRINTS PR00783 Major intrinsic protein family signature 43 67 6.5E-49 T 09-03-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 RG43_RS16230 205ea81ac40fba0b08bbc60666ff4664 231 PRINTS PR00783 Major intrinsic protein family signature 206 226 6.5E-49 T 09-03-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 RG43_RS16230 205ea81ac40fba0b08bbc60666ff4664 231 PRINTS PR00783 Major intrinsic protein family signature 3 22 6.5E-49 T 09-03-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 RG43_RS16230 205ea81ac40fba0b08bbc60666ff4664 231 PRINTS PR00783 Major intrinsic protein family signature 80 99 6.5E-49 T 09-03-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 RG43_RS16230 205ea81ac40fba0b08bbc60666ff4664 231 PRINTS PR00783 Major intrinsic protein family signature 137 155 6.5E-49 T 09-03-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 RG43_RS25625 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 352 1.0E-117 T 09-03-2017 IPR028053 Membrane insertase YidC, N-terminal RG43_RS25625 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 PRINTS PR01900 YidC translocation/secretion protein signature 339 355 5.3E-30 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RG43_RS25625 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 PRINTS PR01900 YidC translocation/secretion protein signature 488 512 5.3E-30 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RG43_RS25625 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 PRINTS PR01900 YidC translocation/secretion protein signature 468 483 5.3E-30 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RG43_RS25625 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 Pfam PF02096 60Kd inner membrane protein 354 533 1.3E-60 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RG43_RS25625 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 Pfam PF14849 YidC periplasmic domain 61 343 8.1E-90 T 09-03-2017 IPR028053 Membrane insertase YidC, N-terminal RG43_RS25625 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 353 533 4.8E-69 T 09-03-2017 IPR028055 Membrane insertase YidC/Oxa1, C-terminal RG43_RS25625 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 535 27.008 T 09-03-2017 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 RG43_RS25625 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 PRINTS PR00701 60kDa inner membrane protein signature 251 266 1.3E-109 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RG43_RS25625 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 PRINTS PR00701 60kDa inner membrane protein signature 415 438 1.3E-109 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RG43_RS25625 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 PRINTS PR00701 60kDa inner membrane protein signature 324 344 1.3E-109 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RG43_RS25625 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 PRINTS PR00701 60kDa inner membrane protein signature 66 87 1.3E-109 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RG43_RS25625 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 PRINTS PR00701 60kDa inner membrane protein signature 2 23 1.3E-109 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RG43_RS25625 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 PRINTS PR00701 60kDa inner membrane protein signature 499 522 1.3E-109 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RG43_RS25625 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 PRINTS PR00701 60kDa inner membrane protein signature 158 178 1.3E-109 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RG43_RS25625 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 PRINTS PR00701 60kDa inner membrane protein signature 217 235 1.3E-109 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RG43_RS25625 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 PRINTS PR00701 60kDa inner membrane protein signature 462 484 1.3E-109 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RG43_RS02445 f3f9af9f0f3baa9ec3319b1573a90dfc 59 SUPERFAMILY SSF55129 3 59 3.01E-21 T 09-03-2017 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain RG43_RS02445 f3f9af9f0f3baa9ec3319b1573a90dfc 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 22.049 T 09-03-2017 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 RG43_RS02445 f3f9af9f0f3baa9ec3319b1573a90dfc 59 Pfam PF00327 Ribosomal protein L30p/L7e 5 54 2.9E-19 T 09-03-2017 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain RG43_RS02445 f3f9af9f0f3baa9ec3319b1573a90dfc 59 Gene3D G3DSA:3.30.1390.20 2 59 1.7E-30 T 09-03-2017 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain RG43_RS02445 f3f9af9f0f3baa9ec3319b1573a90dfc 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 59 1.6E-28 T 09-03-2017 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 RG43_RS02445 f3f9af9f0f3baa9ec3319b1573a90dfc 59 PIRSF PIRSF002211 1 59 6.5E-30 T 09-03-2017 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 RG43_RS02445 f3f9af9f0f3baa9ec3319b1573a90dfc 59 ProSitePatterns PS00634 Ribosomal protein L30 signature. 23 55 - T 09-03-2017 IPR018038 Ribosomal protein L30, conserved site RG43_RS21095 80169ac40b04644e64f19b23f346f32f 414 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 359 383 - T 09-03-2017 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 RG43_RS21095 80169ac40b04644e64f19b23f346f32f 414 Pfam PF01098 Cell cycle protein 47 402 4.1E-131 T 09-03-2017 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 RG43_RS21095 80169ac40b04644e64f19b23f346f32f 414 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 45 400 1.6E-134 T 09-03-2017 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 RG43_RS21095 80169ac40b04644e64f19b23f346f32f 414 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 43 410 42.309 T 09-03-2017 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 RG43_RS23285 6f778596a627bf6124033e43707f69ac 549 Pfam PF00474 Sodium:solute symporter family 63 468 4.4E-140 T 09-03-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RG43_RS23285 6f778596a627bf6124033e43707f69ac 549 TIGRFAM TIGR02711 symport_actP: cation/acetate symporter ActP 2 549 0.0 T 09-03-2017 IPR014083 Cation/acetate symporter ActP GO:0005887|GO:0015123|GO:0043879 RG43_RS23285 6f778596a627bf6124033e43707f69ac 549 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 450 470 - T 09-03-2017 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 RG43_RS23285 6f778596a627bf6124033e43707f69ac 549 Hamap MF_01426 Cation/acetate symporter ActP [actP]. 1 549 60.688 T 09-03-2017 IPR014083 Cation/acetate symporter ActP GO:0005887|GO:0015123|GO:0043879 RG43_RS23285 6f778596a627bf6124033e43707f69ac 549 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 178 203 - T 09-03-2017 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 RG43_RS23285 6f778596a627bf6124033e43707f69ac 549 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 63 466 8.8E-63 T 09-03-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RG43_RS08375 5e3d279c7a066adfaa3edd0db93e2633 325 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 10 323 24.069 T 09-03-2017 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08375 5e3d279c7a066adfaa3edd0db93e2633 325 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 211 224 - T 09-03-2017 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08375 5e3d279c7a066adfaa3edd0db93e2633 325 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 56 71 - T 09-03-2017 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08375 5e3d279c7a066adfaa3edd0db93e2633 325 Pfam PF00146 NADH dehydrogenase 17 317 1.5E-120 T 09-03-2017 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS10560 5c36cd5cfe6562c882ac43943f30275d 452 SMART SM00387 344 452 2.5E-24 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS10560 5c36cd5cfe6562c882ac43943f30275d 452 SMART SM00388 235 301 7.7E-12 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS10560 5c36cd5cfe6562c882ac43943f30275d 452 Pfam PF00512 His Kinase A (phospho-acceptor) domain 236 299 1.1E-9 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS10560 5c36cd5cfe6562c882ac43943f30275d 452 Pfam PF00672 HAMP domain 162 230 4.0E-10 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RG43_RS10560 5c36cd5cfe6562c882ac43943f30275d 452 SUPERFAMILY SSF55874 312 450 4.38E-26 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS10560 5c36cd5cfe6562c882ac43943f30275d 452 Gene3D G3DSA:1.10.287.130 234 297 7.1E-7 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS10560 5c36cd5cfe6562c882ac43943f30275d 452 SUPERFAMILY SSF47384 218 302 5.49E-14 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS10560 5c36cd5cfe6562c882ac43943f30275d 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 408 1.4E-5 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS10560 5c36cd5cfe6562c882ac43943f30275d 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 431 1.4E-5 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS10560 5c36cd5cfe6562c882ac43943f30275d 452 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 345 451 2.5E-13 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS10560 5c36cd5cfe6562c882ac43943f30275d 452 Gene3D G3DSA:3.30.565.10 309 450 2.6E-26 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS10560 5c36cd5cfe6562c882ac43943f30275d 452 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 3 449 1.4E-95 T 09-03-2017 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 RG43_RS02820 ed5327ca0fe0626a7b5da4213b7b03b8 375 Gene3D G3DSA:3.40.50.300 37 184 3.8E-21 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS02820 ed5327ca0fe0626a7b5da4213b7b03b8 375 Hamap MF_01919 Cell division protein ZapE [zapE]. 4 374 53.838 T 09-03-2017 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 RG43_RS02820 ed5327ca0fe0626a7b5da4213b7b03b8 375 Pfam PF03969 AFG1-like ATPase 4 371 1.9E-170 T 09-03-2017 IPR005654 ATPase, AFG1-like GO:0005524 RG43_RS02820 ed5327ca0fe0626a7b5da4213b7b03b8 375 SUPERFAMILY SSF52540 69 208 2.22E-13 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS05510 6d0e840d2694d8405db10848fbd7e62c 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 6.1E-21 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS05510 6d0e840d2694d8405db10848fbd7e62c 343 Gene3D G3DSA:3.40.50.2300 167 330 2.5E-52 T 09-03-2017 RG43_RS05510 6d0e840d2694d8405db10848fbd7e62c 343 SUPERFAMILY SSF47413 1 59 1.56E-16 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS05510 6d0e840d2694d8405db10848fbd7e62c 343 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.6E-7 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS05510 6d0e840d2694d8405db10848fbd7e62c 343 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.6E-7 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS05510 6d0e840d2694d8405db10848fbd7e62c 343 Gene3D G3DSA:3.40.50.2300 58 166 2.9E-45 T 09-03-2017 RG43_RS05510 6d0e840d2694d8405db10848fbd7e62c 343 Gene3D G3DSA:1.10.260.40 2 57 8.7E-25 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS05510 6d0e840d2694d8405db10848fbd7e62c 343 Pfam PF13377 Periplasmic binding protein-like domain 168 329 2.0E-36 T 09-03-2017 RG43_RS05510 6d0e840d2694d8405db10848fbd7e62c 343 SUPERFAMILY SSF53822 60 333 2.36E-85 T 09-03-2017 IPR028082 Periplasmic binding protein-like I RG43_RS05510 6d0e840d2694d8405db10848fbd7e62c 343 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 09-03-2017 RG43_RS05510 6d0e840d2694d8405db10848fbd7e62c 343 SMART SM00354 1 71 5.9E-37 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS24225 4121b82578f17e12df74c89b43ed5747 91 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 7 85 8.8E-11 T 09-03-2017 IPR019289 Bacteriophage tail protein Gp41, putative RG43_RS23315 7c1625ad769c9a7d6c183f905bc03e74 154 Pfam PF09278 MerR, DNA binding 54 119 1.1E-15 T 09-03-2017 IPR015358 Transcription regulator MerR, DNA binding RG43_RS23315 7c1625ad769c9a7d6c183f905bc03e74 154 Gene3D G3DSA:1.10.1660.10 66 144 7.8E-15 T 09-03-2017 RG43_RS23315 7c1625ad769c9a7d6c183f905bc03e74 154 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 12 152 2.8E-74 T 09-03-2017 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 RG43_RS23315 7c1625ad769c9a7d6c183f905bc03e74 154 Gene3D G3DSA:1.10.1660.10 10 65 3.3E-18 T 09-03-2017 RG43_RS23315 7c1625ad769c9a7d6c183f905bc03e74 154 ProSitePatterns PS00552 MerR-type HTH domain signature. 15 37 - T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RG43_RS23315 7c1625ad769c9a7d6c183f905bc03e74 154 Pfam PF00376 MerR family regulatory protein 13 49 4.1E-12 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RG43_RS23315 7c1625ad769c9a7d6c183f905bc03e74 154 SUPERFAMILY SSF46955 12 134 2.12E-27 T 09-03-2017 IPR009061 Putative DNA-binding domain RG43_RS23315 7c1625ad769c9a7d6c183f905bc03e74 154 SMART SM00422 12 80 2.9E-21 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RG43_RS23315 7c1625ad769c9a7d6c183f905bc03e74 154 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 47 67 5.9E-11 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RG43_RS23315 7c1625ad769c9a7d6c183f905bc03e74 154 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 24 5.9E-11 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RG43_RS23315 7c1625ad769c9a7d6c183f905bc03e74 154 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 24 37 5.9E-11 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RG43_RS15870 46cd86b0ab1a1ff8395460bbf4878e7e 180 Pfam PF07126 Cell-division protein ZapC 3 168 8.4E-69 T 09-03-2017 IPR009809 Cell division protein ZapC RG43_RS15870 46cd86b0ab1a1ff8395460bbf4878e7e 180 PIRSF PIRSF010252 1 179 1.7E-67 T 09-03-2017 IPR009809 Cell division protein ZapC RG43_RS15870 46cd86b0ab1a1ff8395460bbf4878e7e 180 Hamap MF_00906 Cell division protein ZapC [zapC]. 2 178 40.41 T 09-03-2017 IPR009809 Cell division protein ZapC RG43_RS02270 cbe49250c5c40dd0cf8f72f2541c49b5 900 SUPERFAMILY SSF51055 459 516 3.79E-10 T 09-03-2017 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 RG43_RS02270 cbe49250c5c40dd0cf8f72f2541c49b5 900 SMART SM00495 25 73 7.6E-8 T 09-03-2017 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 RG43_RS02270 cbe49250c5c40dd0cf8f72f2541c49b5 900 SMART SM00495 528 570 21.0 T 09-03-2017 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 RG43_RS02270 cbe49250c5c40dd0cf8f72f2541c49b5 900 SMART SM00495 415 459 1.6E-6 T 09-03-2017 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 RG43_RS02270 cbe49250c5c40dd0cf8f72f2541c49b5 900 SMART SM00495 128 176 1.3E-6 T 09-03-2017 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 RG43_RS02270 cbe49250c5c40dd0cf8f72f2541c49b5 900 SMART SM00495 229 277 8.4E-7 T 09-03-2017 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 RG43_RS02270 cbe49250c5c40dd0cf8f72f2541c49b5 900 SMART SM00495 340 388 5.9E-9 T 09-03-2017 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 RG43_RS02270 cbe49250c5c40dd0cf8f72f2541c49b5 900 SMART SM00495 462 514 5.7E-13 T 09-03-2017 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 RG43_RS02270 cbe49250c5c40dd0cf8f72f2541c49b5 900 SUPERFAMILY SSF51445 609 880 1.17E-26 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily RG43_RS02270 cbe49250c5c40dd0cf8f72f2541c49b5 900 Gene3D G3DSA:3.20.20.80 613 868 1.8E-11 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RG43_RS02270 cbe49250c5c40dd0cf8f72f2541c49b5 900 Pfam PF02839 Carbohydrate binding domain 462 511 2.3E-15 T 09-03-2017 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 RG43_RS02270 cbe49250c5c40dd0cf8f72f2541c49b5 900 Gene3D G3DSA:2.10.10.20 461 516 1.4E-12 T 09-03-2017 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 RG43_RS10210 7590d5dacd69aaa35c1b3283bec856a1 434 TIGRFAM TIGR03494 salicyl_syn: salicylate synthase 15 434 1.7E-205 T 09-03-2017 IPR019996 Salicylate synthase GO:0008909|GO:0016833 KEGG: 00130+5.4.4.2|KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6120|MetaCyc: PWY-6406|MetaCyc: PWY-6627|MetaCyc: PWY-7626 RG43_RS10210 7590d5dacd69aaa35c1b3283bec856a1 434 Gene3D G3DSA:3.60.120.10 49 432 1.3E-84 T 09-03-2017 IPR005801 ADC synthase GO:0009058 RG43_RS10210 7590d5dacd69aaa35c1b3283bec856a1 434 Pfam PF00425 chorismate binding enzyme 173 424 2.2E-69 T 09-03-2017 IPR015890 Chorismate-utilising enzyme, C-terminal RG43_RS10210 7590d5dacd69aaa35c1b3283bec856a1 434 SUPERFAMILY SSF56322 10 432 9.94E-96 T 09-03-2017 IPR005801 ADC synthase GO:0009058 RG43_RS18840 d538bcaafd2c39381572efd93acd371d 663 SUPERFAMILY SSF81442 43 560 5.23E-180 T 09-03-2017 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RG43_RS18840 d538bcaafd2c39381572efd93acd371d 663 Gene3D G3DSA:1.20.210.10 40 589 1.2E-190 T 09-03-2017 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RG43_RS18840 d538bcaafd2c39381572efd93acd371d 663 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 56 504 1.6E-135 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RG43_RS18840 d538bcaafd2c39381572efd93acd371d 663 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 09-03-2017 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RG43_RS18840 d538bcaafd2c39381572efd93acd371d 663 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 647 0.0 T 09-03-2017 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 RG43_RS18840 d538bcaafd2c39381572efd93acd371d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 3.2E-94 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RG43_RS18840 d538bcaafd2c39381572efd93acd371d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 3.2E-94 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RG43_RS18840 d538bcaafd2c39381572efd93acd371d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 3.2E-94 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RG43_RS18840 d538bcaafd2c39381572efd93acd371d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 3.2E-94 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RG43_RS18840 d538bcaafd2c39381572efd93acd371d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 3.2E-94 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RG43_RS18840 d538bcaafd2c39381572efd93acd371d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 3.2E-94 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RG43_RS18840 d538bcaafd2c39381572efd93acd371d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 3.2E-94 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RG43_RS18840 d538bcaafd2c39381572efd93acd371d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 3.2E-94 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RG43_RS18840 d538bcaafd2c39381572efd93acd371d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 3.2E-94 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RG43_RS18840 d538bcaafd2c39381572efd93acd371d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 3.2E-94 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RG43_RS18840 d538bcaafd2c39381572efd93acd371d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 3.2E-94 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RG43_RS18840 d538bcaafd2c39381572efd93acd371d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 3.2E-94 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RG43_RS22715 cc0fe12bf30642df7d3d635784fe57c9 181 SUPERFAMILY SSF53098 3 180 3.89E-49 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS22715 cc0fe12bf30642df7d3d635784fe57c9 181 Pfam PF00929 Exonuclease 9 170 2.2E-37 T 09-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III RG43_RS22715 cc0fe12bf30642df7d3d635784fe57c9 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 45.336 T 09-03-2017 IPR022894 Oligoribonuclease GO:0016788 RG43_RS22715 cc0fe12bf30642df7d3d635784fe57c9 181 Gene3D G3DSA:3.30.420.10 4 180 4.3E-72 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS22715 cc0fe12bf30642df7d3d635784fe57c9 181 SMART SM00479 7 180 1.2E-21 T 09-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III RG43_RS11495 4c301b03c1bb7908036c0ac89b136385 95 Pfam PF13974 YebO-like protein 16 95 5.7E-32 T 09-03-2017 IPR025594 YebO-like protein RG43_RS19955 28d87ad81d57fe09f28f63f605435245 224 Pfam PF00717 Peptidase S24-like 133 200 1.4E-15 T 09-03-2017 IPR019759 Peptidase S24/S26A/S26B RG43_RS19955 28d87ad81d57fe09f28f63f605435245 224 SUPERFAMILY SSF51306 90 214 2.22E-28 T 09-03-2017 IPR015927 Peptidase S24/S26A/S26B/S26C RG43_RS19955 28d87ad81d57fe09f28f63f605435245 224 Gene3D G3DSA:2.10.109.10 127 217 2.2E-25 T 09-03-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain RG43_RS17490 6c0d4ca41d12a12d91284b2767e6f343 472 Gene3D G3DSA:1.25.40.80 148 283 6.6E-42 T 09-03-2017 RG43_RS17490 6c0d4ca41d12a12d91284b2767e6f343 472 Gene3D G3DSA:3.40.50.620 2 147 1.8E-46 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS17490 6c0d4ca41d12a12d91284b2767e6f343 472 SUPERFAMILY SSF52425 3 198 3.4E-52 T 09-03-2017 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 RG43_RS17490 6c0d4ca41d12a12d91284b2767e6f343 472 Pfam PF03441 FAD binding domain of DNA photolyase 272 466 1.8E-85 T 09-03-2017 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 RG43_RS17490 6c0d4ca41d12a12d91284b2767e6f343 472 SUPERFAMILY SSF48173 192 470 4.06E-108 T 09-03-2017 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 RG43_RS17490 6c0d4ca41d12a12d91284b2767e6f343 472 Gene3D G3DSA:1.10.579.10 284 469 2.8E-81 T 09-03-2017 RG43_RS17490 6c0d4ca41d12a12d91284b2767e6f343 472 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 342 361 - T 09-03-2017 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal RG43_RS17490 6c0d4ca41d12a12d91284b2767e6f343 472 Pfam PF00875 DNA photolyase 5 168 2.5E-45 T 09-03-2017 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 RG43_RS17490 6c0d4ca41d12a12d91284b2767e6f343 472 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 322 334 - T 09-03-2017 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal RG43_RS17490 6c0d4ca41d12a12d91284b2767e6f343 472 PRINTS PR00147 DNA photolyase signature 322 338 6.1E-32 T 09-03-2017 IPR002081 Cryptochrome/DNA photolyase class 1 RG43_RS17490 6c0d4ca41d12a12d91284b2767e6f343 472 PRINTS PR00147 DNA photolyase signature 143 159 6.1E-32 T 09-03-2017 IPR002081 Cryptochrome/DNA photolyase class 1 RG43_RS17490 6c0d4ca41d12a12d91284b2767e6f343 472 PRINTS PR00147 DNA photolyase signature 381 395 6.1E-32 T 09-03-2017 IPR002081 Cryptochrome/DNA photolyase class 1 RG43_RS17490 6c0d4ca41d12a12d91284b2767e6f343 472 PRINTS PR00147 DNA photolyase signature 342 360 6.1E-32 T 09-03-2017 IPR002081 Cryptochrome/DNA photolyase class 1 RG43_RS09745 ef518de178428378bcf2664ff652e421 245 Gene3D G3DSA:3.20.20.70 1 243 1.3E-78 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS09745 ef518de178428378bcf2664ff652e421 245 SUPERFAMILY SSF51366 1 242 1.28E-65 T 09-03-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RG43_RS09745 ef518de178428378bcf2664ff652e421 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 35.89 T 09-03-2017 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 RG43_RS09745 ef518de178428378bcf2664ff652e421 245 Pfam PF00977 Histidine biosynthesis protein 1 234 4.9E-76 T 09-03-2017 IPR006062 Histidine biosynthesis GO:0000105 RG43_RS09745 ef518de178428378bcf2664ff652e421 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 9.1E-81 T 09-03-2017 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 RG43_RS13680 af521b81483b5726522276e3d3c4f3f4 410 Pfam PF00990 Diguanylate cyclase, GGDEF domain 253 406 1.1E-45 T 09-03-2017 IPR000160 GGDEF domain RG43_RS13680 af521b81483b5726522276e3d3c4f3f4 410 SMART SM00091 129 198 0.0039 T 09-03-2017 IPR000014 PAS domain RG43_RS13680 af521b81483b5726522276e3d3c4f3f4 410 SMART SM00091 3 70 2.9 T 09-03-2017 IPR000014 PAS domain RG43_RS13680 af521b81483b5726522276e3d3c4f3f4 410 SUPERFAMILY SSF55785 148 250 5.76E-15 T 09-03-2017 IPR000014 PAS domain RG43_RS13680 af521b81483b5726522276e3d3c4f3f4 410 SMART SM00267 242 410 1.1E-66 T 09-03-2017 IPR000160 GGDEF domain RG43_RS13680 af521b81483b5726522276e3d3c4f3f4 410 Pfam PF08448 PAS fold 142 244 3.4E-8 T 09-03-2017 IPR013656 PAS fold-4 RG43_RS13680 af521b81483b5726522276e3d3c4f3f4 410 Gene3D G3DSA:3.30.450.20 128 240 3.9E-11 T 09-03-2017 RG43_RS13680 af521b81483b5726522276e3d3c4f3f4 410 Gene3D G3DSA:3.30.70.270 254 408 1.1E-46 T 09-03-2017 RG43_RS13680 af521b81483b5726522276e3d3c4f3f4 410 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 130 249 1.6E-12 T 09-03-2017 IPR000014 PAS domain RG43_RS13680 af521b81483b5726522276e3d3c4f3f4 410 SUPERFAMILY SSF55073 258 408 3.3E-43 T 09-03-2017 IPR029787 Nucleotide cyclase RG43_RS13680 af521b81483b5726522276e3d3c4f3f4 410 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 249 408 4.3E-44 T 09-03-2017 IPR000160 GGDEF domain RG43_RS12790 aa33b1967766f30ba6613bbc34175a69 292 SUPERFAMILY SSF50129 3 121 9.59E-35 T 09-03-2017 IPR011032 GroES-like RG43_RS12790 aa33b1967766f30ba6613bbc34175a69 292 Gene3D G3DSA:3.40.50.720 120 232 6.4E-24 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS12790 aa33b1967766f30ba6613bbc34175a69 292 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 11 25 - T 09-03-2017 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 RG43_RS12790 aa33b1967766f30ba6613bbc34175a69 292 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 4 84 5.2E-25 T 09-03-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RG43_RS12790 aa33b1967766f30ba6613bbc34175a69 292 Gene3D G3DSA:3.90.180.10 3 119 2.4E-38 T 09-03-2017 IPR011032 GroES-like RG43_RS12790 aa33b1967766f30ba6613bbc34175a69 292 Pfam PF00107 Zinc-binding dehydrogenase 124 250 1.6E-19 T 09-03-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RG43_RS12790 aa33b1967766f30ba6613bbc34175a69 292 SUPERFAMILY SSF51735 90 257 8.87E-26 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS13975 f1625a7f912e8790c6ff6152dfed29e4 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 2.9E-7 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RG43_RS13975 f1625a7f912e8790c6ff6152dfed29e4 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 2.9E-7 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RG43_RS13975 f1625a7f912e8790c6ff6152dfed29e4 188 Pfam PF13977 Bacterial transcriptional repressor 97 185 3.2E-6 T 09-03-2017 RG43_RS13975 f1625a7f912e8790c6ff6152dfed29e4 188 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 59 - T 09-03-2017 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RG43_RS13975 f1625a7f912e8790c6ff6152dfed29e4 188 Gene3D G3DSA:1.10.357.10 8 186 1.0E-27 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RG43_RS13975 f1625a7f912e8790c6ff6152dfed29e4 188 SUPERFAMILY SSF46689 3 74 1.35E-18 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS13975 f1625a7f912e8790c6ff6152dfed29e4 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 6.5E-16 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RG43_RS19625 7cda5970ff7c6dad0400a7e49d1a909f 195 PIRSF PIRSF007320 1 195 1.3E-117 T 09-03-2017 IPR016514 Fimbrial protein MatB RG43_RS19625 7cda5970ff7c6dad0400a7e49d1a909f 195 Pfam PF16449 Fimbrillin MatB 26 193 4.4E-90 T 09-03-2017 IPR016514 Fimbrial protein MatB RG43_RS23765 5a6db54270d33f1e4bfa723559a235e2 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 5.3E-28 T 09-03-2017 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RG43_RS23765 5a6db54270d33f1e4bfa723559a235e2 1342 Gene3D G3DSA:2.40.50.100 715 792 3.5E-31 T 09-03-2017 RG43_RS23765 5a6db54270d33f1e4bfa723559a235e2 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 2.0E-30 T 09-03-2017 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RG43_RS23765 5a6db54270d33f1e4bfa723559a235e2 1342 SUPERFAMILY SSF64484 343 939 0.0 T 09-03-2017 RG43_RS23765 5a6db54270d33f1e4bfa723559a235e2 1342 SUPERFAMILY SSF64484 11 226 0.0 T 09-03-2017 RG43_RS23765 5a6db54270d33f1e4bfa723559a235e2 1342 SUPERFAMILY SSF64484 1039 1341 0.0 T 09-03-2017 RG43_RS23765 5a6db54270d33f1e4bfa723559a235e2 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 09-03-2017 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RG43_RS23765 5a6db54270d33f1e4bfa723559a235e2 1342 Gene3D G3DSA:2.40.50.150 828 937 2.1E-57 T 09-03-2017 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RG43_RS23765 5a6db54270d33f1e4bfa723559a235e2 1342 Gene3D G3DSA:2.40.50.150 1045 1059 2.1E-57 T 09-03-2017 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RG43_RS23765 5a6db54270d33f1e4bfa723559a235e2 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1342 12.373 T 09-03-2017 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RG43_RS23765 5a6db54270d33f1e4bfa723559a235e2 1342 Gene3D G3DSA:3.90.1110.10 153 230 1.3E-65 T 09-03-2017 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RG43_RS23765 5a6db54270d33f1e4bfa723559a235e2 1342 Gene3D G3DSA:3.90.1110.10 346 444 1.3E-65 T 09-03-2017 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RG43_RS23765 5a6db54270d33f1e4bfa723559a235e2 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 225 2.3E-7 T 09-03-2017 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RG43_RS23765 5a6db54270d33f1e4bfa723559a235e2 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 340 454 5.2E-15 T 09-03-2017 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RG43_RS23765 5a6db54270d33f1e4bfa723559a235e2 1342 Gene3D G3DSA:2.30.150.10 592 656 6.9E-32 T 09-03-2017 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RG43_RS23765 5a6db54270d33f1e4bfa723559a235e2 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1264 1.2E-160 T 09-03-2017 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RG43_RS23765 5a6db54270d33f1e4bfa723559a235e2 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 2.2E-58 T 09-03-2017 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RG43_RS23765 5a6db54270d33f1e4bfa723559a235e2 1342 Gene3D G3DSA:3.90.1100.10 20 151 1.1E-147 T 09-03-2017 RG43_RS23765 5a6db54270d33f1e4bfa723559a235e2 1342 Gene3D G3DSA:3.90.1100.10 659 713 1.1E-147 T 09-03-2017 RG43_RS23765 5a6db54270d33f1e4bfa723559a235e2 1342 Gene3D G3DSA:3.90.1100.10 445 591 1.1E-147 T 09-03-2017 RG43_RS23765 5a6db54270d33f1e4bfa723559a235e2 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1339 0.0 T 09-03-2017 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RG43_RS23765 5a6db54270d33f1e4bfa723559a235e2 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1266 1340 1.9E-27 T 09-03-2017 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RG43_RS23765 5a6db54270d33f1e4bfa723559a235e2 1342 Gene3D G3DSA:2.40.270.10 793 820 5.2E-90 T 09-03-2017 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RG43_RS23765 5a6db54270d33f1e4bfa723559a235e2 1342 Gene3D G3DSA:2.40.270.10 1060 1242 5.2E-90 T 09-03-2017 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RG43_RS06100 2436482ed710879a6b519783a7d9901f 201 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 10 193 2.0E-89 T 09-03-2017 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 RG43_RS06100 2436482ed710879a6b519783a7d9901f 201 Pfam PF01583 Adenylylsulphate kinase 27 179 9.8E-73 T 09-03-2017 RG43_RS06100 2436482ed710879a6b519783a7d9901f 201 Gene3D G3DSA:3.40.50.300 6 200 1.9E-89 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS06100 2436482ed710879a6b519783a7d9901f 201 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 26 197 38.735 T 09-03-2017 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 RG43_RS06100 2436482ed710879a6b519783a7d9901f 201 SUPERFAMILY SSF52540 18 194 8.26E-36 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS20870 0c4b65c44498a22741210287e17540e2 126 Pfam PF02261 Aspartate decarboxylase 1 114 2.5E-47 T 09-03-2017 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 RG43_RS20870 0c4b65c44498a22741210287e17540e2 126 Gene3D G3DSA:2.40.40.20 1 124 6.7E-56 T 09-03-2017 RG43_RS20870 0c4b65c44498a22741210287e17540e2 126 SUPERFAMILY SSF50692 1 121 7.95E-48 T 09-03-2017 IPR009010 Aspartate decarboxylase-like domain RG43_RS20870 0c4b65c44498a22741210287e17540e2 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 126 5.5E-69 T 09-03-2017 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 RG43_RS20870 0c4b65c44498a22741210287e17540e2 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 71.341 T 09-03-2017 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 RG43_RS20870 0c4b65c44498a22741210287e17540e2 126 PIRSF PIRSF006246 1 125 9.6E-51 T 09-03-2017 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 RG43_RS20870 0c4b65c44498a22741210287e17540e2 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 123 2.0E-66 T 09-03-2017 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 RG43_RS16755 5663d60f8c0643069a55447c139bf1a6 302 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 12 296 5.4E-105 T 09-03-2017 IPR010119 Gluconeogenesis factor RG43_RS16755 5663d60f8c0643069a55447c139bf1a6 302 Hamap MF_00973 Gluconeogenesis factor. 8 300 32.606 T 09-03-2017 IPR010119 Gluconeogenesis factor RG43_RS16755 5663d60f8c0643069a55447c139bf1a6 302 SUPERFAMILY SSF142338 11 295 5.49E-87 T 09-03-2017 RG43_RS16755 5663d60f8c0643069a55447c139bf1a6 302 Pfam PF01933 Uncharacterised protein family UPF0052 12 289 2.2E-79 T 09-03-2017 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 RG43_RS16755 5663d60f8c0643069a55447c139bf1a6 302 Gene3D G3DSA:3.40.50.10680 82 299 9.9E-55 T 09-03-2017 RG43_RS21420 fd663c367297cadbd81e4c8b4dbfb5a7 316 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 284 2.4E-100 T 09-03-2017 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 RG43_RS21420 fd663c367297cadbd81e4c8b4dbfb5a7 316 Pfam PF02401 LytB protein 3 282 1.5E-92 T 09-03-2017 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 RG43_RS21420 fd663c367297cadbd81e4c8b4dbfb5a7 316 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 286 38.131 T 09-03-2017 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 RG43_RS14830 4690ff3af55c132bf885dd294f4ed1b9 152 Gene3D G3DSA:3.30.70.1290 3 132 1.7E-55 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RG43_RS14830 4690ff3af55c132bf885dd294f4ed1b9 152 SUPERFAMILY SSF143422 2 129 2.62E-46 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RG43_RS14830 4690ff3af55c132bf885dd294f4ed1b9 152 Pfam PF01797 Transposase IS200 like 12 129 3.6E-36 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RG43_RS14830 4690ff3af55c132bf885dd294f4ed1b9 152 SMART SM01321 11 129 9.1E-39 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RG43_RS13435 4690ff3af55c132bf885dd294f4ed1b9 152 Gene3D G3DSA:3.30.70.1290 3 132 1.7E-55 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RG43_RS13435 4690ff3af55c132bf885dd294f4ed1b9 152 SUPERFAMILY SSF143422 2 129 2.62E-46 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RG43_RS13435 4690ff3af55c132bf885dd294f4ed1b9 152 Pfam PF01797 Transposase IS200 like 12 129 3.6E-36 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RG43_RS13435 4690ff3af55c132bf885dd294f4ed1b9 152 SMART SM01321 11 129 9.1E-39 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RG43_RS15960 4690ff3af55c132bf885dd294f4ed1b9 152 Gene3D G3DSA:3.30.70.1290 3 132 1.7E-55 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RG43_RS15960 4690ff3af55c132bf885dd294f4ed1b9 152 SUPERFAMILY SSF143422 2 129 2.62E-46 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RG43_RS15960 4690ff3af55c132bf885dd294f4ed1b9 152 Pfam PF01797 Transposase IS200 like 12 129 3.6E-36 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RG43_RS15960 4690ff3af55c132bf885dd294f4ed1b9 152 SMART SM01321 11 129 9.1E-39 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RG43_RS16540 4690ff3af55c132bf885dd294f4ed1b9 152 Gene3D G3DSA:3.30.70.1290 3 132 1.7E-55 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RG43_RS16540 4690ff3af55c132bf885dd294f4ed1b9 152 SUPERFAMILY SSF143422 2 129 2.62E-46 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RG43_RS16540 4690ff3af55c132bf885dd294f4ed1b9 152 Pfam PF01797 Transposase IS200 like 12 129 3.6E-36 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RG43_RS16540 4690ff3af55c132bf885dd294f4ed1b9 152 SMART SM01321 11 129 9.1E-39 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RG43_RS13580 4690ff3af55c132bf885dd294f4ed1b9 152 Gene3D G3DSA:3.30.70.1290 3 132 1.7E-55 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RG43_RS13580 4690ff3af55c132bf885dd294f4ed1b9 152 SUPERFAMILY SSF143422 2 129 2.62E-46 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RG43_RS13580 4690ff3af55c132bf885dd294f4ed1b9 152 Pfam PF01797 Transposase IS200 like 12 129 3.6E-36 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RG43_RS13580 4690ff3af55c132bf885dd294f4ed1b9 152 SMART SM01321 11 129 9.1E-39 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RG43_RS17655 4690ff3af55c132bf885dd294f4ed1b9 152 Gene3D G3DSA:3.30.70.1290 3 132 1.7E-55 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RG43_RS17655 4690ff3af55c132bf885dd294f4ed1b9 152 SUPERFAMILY SSF143422 2 129 2.62E-46 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RG43_RS17655 4690ff3af55c132bf885dd294f4ed1b9 152 Pfam PF01797 Transposase IS200 like 12 129 3.6E-36 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RG43_RS17655 4690ff3af55c132bf885dd294f4ed1b9 152 SMART SM01321 11 129 9.1E-39 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RG43_RS11465 4690ff3af55c132bf885dd294f4ed1b9 152 Gene3D G3DSA:3.30.70.1290 3 132 1.7E-55 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RG43_RS11465 4690ff3af55c132bf885dd294f4ed1b9 152 SUPERFAMILY SSF143422 2 129 2.62E-46 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RG43_RS11465 4690ff3af55c132bf885dd294f4ed1b9 152 Pfam PF01797 Transposase IS200 like 12 129 3.6E-36 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RG43_RS11465 4690ff3af55c132bf885dd294f4ed1b9 152 SMART SM01321 11 129 9.1E-39 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RG43_RS13170 4690ff3af55c132bf885dd294f4ed1b9 152 Gene3D G3DSA:3.30.70.1290 3 132 1.7E-55 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RG43_RS13170 4690ff3af55c132bf885dd294f4ed1b9 152 SUPERFAMILY SSF143422 2 129 2.62E-46 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RG43_RS13170 4690ff3af55c132bf885dd294f4ed1b9 152 Pfam PF01797 Transposase IS200 like 12 129 3.6E-36 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RG43_RS13170 4690ff3af55c132bf885dd294f4ed1b9 152 SMART SM01321 11 129 9.1E-39 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RG43_RS22975 33d013d6b785fbfe1ba8edbf3e7a2185 469 Pfam PF13347 MFS/sugar transport protein 6 432 3.2E-87 T 09-03-2017 RG43_RS22975 33d013d6b785fbfe1ba8edbf3e7a2185 469 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 4 446 1.3E-174 T 09-03-2017 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 RG43_RS22975 33d013d6b785fbfe1ba8edbf3e7a2185 469 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 55 80 - T 09-03-2017 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 RG43_RS22975 33d013d6b785fbfe1ba8edbf3e7a2185 469 SUPERFAMILY SSF103473 6 439 4.32E-31 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS22975 33d013d6b785fbfe1ba8edbf3e7a2185 469 Gene3D G3DSA:1.20.1250.20 226 428 5.9E-6 T 09-03-2017 RG43_RS22975 33d013d6b785fbfe1ba8edbf3e7a2185 469 Gene3D G3DSA:1.20.1250.20 9 195 6.0E-13 T 09-03-2017 RG43_RS17935 5f5235573afdcbe60e677995008997b2 317 Gene3D G3DSA:3.40.190.10 116 196 1.0E-10 T 09-03-2017 RG43_RS17935 5f5235573afdcbe60e677995008997b2 317 SUPERFAMILY SSF53850 116 315 5.61E-21 T 09-03-2017 RG43_RS17935 5f5235573afdcbe60e677995008997b2 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 31 88 1.7E-14 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS17935 5f5235573afdcbe60e677995008997b2 317 Gene3D G3DSA:3.40.190.10 197 283 6.6E-12 T 09-03-2017 RG43_RS17935 5f5235573afdcbe60e677995008997b2 317 Gene3D G3DSA:1.10.10.10 25 106 7.3E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS17935 5f5235573afdcbe60e677995008997b2 317 SUPERFAMILY SSF46785 26 106 3.54E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS17935 5f5235573afdcbe60e677995008997b2 317 Pfam PF03466 LysR substrate binding domain 116 316 6.6E-17 T 09-03-2017 IPR005119 LysR, substrate-binding RG43_RS25725 6bb27f9960fa9182d82beeeeb4bc8a5c 137 Hamap MF_02000 Small heat shock protein IbpA [ibpA]. 1 137 51.246 T 09-03-2017 IPR023728 Small heat shock protein IbpA RG43_RS25725 6bb27f9960fa9182d82beeeeb4bc8a5c 137 Gene3D G3DSA:2.60.40.790 4 137 3.9E-18 T 09-03-2017 IPR008978 HSP20-like chaperone RG43_RS25725 6bb27f9960fa9182d82beeeeb4bc8a5c 137 SUPERFAMILY SSF49764 30 137 4.88E-20 T 09-03-2017 IPR008978 HSP20-like chaperone RG43_RS25725 6bb27f9960fa9182d82beeeeb4bc8a5c 137 Pfam PF00011 Hsp20/alpha crystallin family 42 137 5.4E-23 T 09-03-2017 IPR002068 Alpha crystallin/Hsp20 domain RG43_RS23670 7931f8b7b8bc8f7632caff269cb97426 441 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 09-03-2017 IPR025944 Sigma-54 interaction domain, conserved site RG43_RS23670 7931f8b7b8bc8f7632caff269cb97426 441 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 09-03-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RG43_RS23670 7931f8b7b8bc8f7632caff269cb97426 441 SUPERFAMILY SSF52172 4 185 4.13E-48 T 09-03-2017 IPR011006 CheY-like superfamily RG43_RS23670 7931f8b7b8bc8f7632caff269cb97426 441 Gene3D G3DSA:1.10.10.60 398 440 7.7E-19 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS23670 7931f8b7b8bc8f7632caff269cb97426 441 Gene3D G3DSA:3.40.50.300 139 313 2.1E-59 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS23670 7931f8b7b8bc8f7632caff269cb97426 441 Pfam PF00072 Response regulator receiver domain 8 117 2.3E-30 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS23670 7931f8b7b8bc8f7632caff269cb97426 441 SUPERFAMILY SSF46689 398 440 1.25E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS23670 7931f8b7b8bc8f7632caff269cb97426 441 SMART SM00448 6 117 2.0E-38 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS23670 7931f8b7b8bc8f7632caff269cb97426 441 SMART SM00382 161 304 5.4E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS23670 7931f8b7b8bc8f7632caff269cb97426 441 Pfam PF02954 Bacterial regulatory protein, Fis family 403 441 3.6E-15 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RG43_RS23670 7931f8b7b8bc8f7632caff269cb97426 441 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 425 441 2.9E-12 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RG43_RS23670 7931f8b7b8bc8f7632caff269cb97426 441 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 408 425 2.9E-12 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RG43_RS23670 7931f8b7b8bc8f7632caff269cb97426 441 SUPERFAMILY SSF52540 141 385 4.94E-75 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS23670 7931f8b7b8bc8f7632caff269cb97426 441 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 09-03-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RG43_RS23670 7931f8b7b8bc8f7632caff269cb97426 441 Gene3D G3DSA:3.40.50.2300 2 126 1.0E-39 T 09-03-2017 RG43_RS23670 7931f8b7b8bc8f7632caff269cb97426 441 Gene3D G3DSA:1.10.8.60 314 389 2.0E-29 T 09-03-2017 RG43_RS23670 7931f8b7b8bc8f7632caff269cb97426 441 Pfam PF00158 Sigma-54 interaction domain 141 307 5.3E-72 T 09-03-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 SUPERFAMILY SSF51126 77 359 1.76E-71 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 Gene3D G3DSA:2.160.20.10 1638 1782 1.0E-5 T 09-03-2017 IPR012334 Pectin lyase fold RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 Gene3D G3DSA:2.160.20.10 76 368 2.6E-109 T 09-03-2017 IPR012334 Pectin lyase fold RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1406 1443 1.7E-4 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 612 650 0.0024 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1133 1173 0.3 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 863 901 2.9E-6 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 944 982 2.2E-4 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1725 1748 2.6 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1071 1106 0.0077 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 510 546 3.6E-6 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 468 502 0.17 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 570 610 2.8 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 778 817 1.0 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 698 737 1.2E-10 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 652 692 0.01 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 527 569 5.8E-5 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 936 963 0.0021 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 333 368 0.12 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 964 1004 1.9E-5 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1194 1231 0.39 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1291 1327 0.42 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 985 1024 9.3E-6 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1111 1129 1.4 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 738 776 5.7E-6 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 424 449 0.8 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1748 1783 3.9E-4 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 818 857 1.3E-4 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 106 203 2.7E-22 T 09-03-2017 IPR008638 Filamentous haemagglutinin, N-terminal RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 Pfam PF04829 Pre-toxin domain with VENN motif 2716 2766 3.7E-18 T 09-03-2017 IPR006914 VENN motif-containing domain RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 Pfam PF13332 Haemagluttinin repeat 1972 2056 4.7E-6 T 09-03-2017 IPR025157 Haemagluttinin repeat RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 Pfam PF13332 Haemagluttinin repeat 2203 2378 3.4E-44 T 09-03-2017 IPR025157 Haemagluttinin repeat RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 Pfam PF13332 Haemagluttinin repeat 1761 1954 1.8E-5 T 09-03-2017 IPR025157 Haemagluttinin repeat RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 SMART SM00912 88 208 1.1E-51 T 09-03-2017 IPR008638 Filamentous haemagglutinin, N-terminal RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 Pfam PF05860 haemagglutination activity domain 76 207 1.9E-34 T 09-03-2017 IPR008638 Filamentous haemagglutinin, N-terminal RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 25 1.4E-8 T 09-03-2017 IPR024973 ESPR domain RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 Pfam PF05594 Haemagluttinin repeat 517 568 0.05 T 09-03-2017 IPR008619 Filamentous haemagglutinin repeat RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 Pfam PF05594 Haemagluttinin repeat 702 770 2.6E-5 T 09-03-2017 IPR008619 Filamentous haemagglutinin repeat RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 Pfam PF05594 Haemagluttinin repeat 1056 1119 0.012 T 09-03-2017 IPR008619 Filamentous haemagglutinin repeat RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 Pfam PF05594 Haemagluttinin repeat 801 868 2.3E-6 T 09-03-2017 IPR008619 Filamentous haemagglutinin repeat RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 Pfam PF05594 Haemagluttinin repeat 594 650 1.9 T 09-03-2017 IPR008619 Filamentous haemagglutinin repeat RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 Pfam PF05594 Haemagluttinin repeat 255 333 0.0012 T 09-03-2017 IPR008619 Filamentous haemagglutinin repeat RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 Pfam PF05594 Haemagluttinin repeat 1406 1439 8.1 T 09-03-2017 IPR008619 Filamentous haemagglutinin repeat RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 Pfam PF05594 Haemagluttinin repeat 972 1032 0.025 T 09-03-2017 IPR008619 Filamentous haemagglutinin repeat RG43_RS03690 ed87058ac4679d46b8175ea83b434e61 2972 Pfam PF05594 Haemagluttinin repeat 344 415 0.024 T 09-03-2017 IPR008619 Filamentous haemagglutinin repeat RG43_RS18615 46be049f6f54705e4e4750ffc9649e9d 624 Pfam PF00183 Hsp90 protein 211 622 6.6E-125 T 09-03-2017 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 RG43_RS18615 46be049f6f54705e4e4750ffc9649e9d 624 Gene3D G3DSA:3.30.565.10 5 238 5.7E-84 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS18615 46be049f6f54705e4e4750ffc9649e9d 624 SUPERFAMILY SSF110942 510 623 1.7E-34 T 09-03-2017 RG43_RS18615 46be049f6f54705e4e4750ffc9649e9d 624 PRINTS PR00775 90kDa heat shock protein signature 120 142 2.3E-64 T 09-03-2017 IPR020575 Heat shock protein Hsp90, N-terminal RG43_RS18615 46be049f6f54705e4e4750ffc9649e9d 624 PRINTS PR00775 90kDa heat shock protein signature 26 48 2.3E-64 T 09-03-2017 IPR020575 Heat shock protein Hsp90, N-terminal RG43_RS18615 46be049f6f54705e4e4750ffc9649e9d 624 PRINTS PR00775 90kDa heat shock protein signature 75 92 2.3E-64 T 09-03-2017 IPR020575 Heat shock protein Hsp90, N-terminal RG43_RS18615 46be049f6f54705e4e4750ffc9649e9d 624 PRINTS PR00775 90kDa heat shock protein signature 190 208 2.3E-64 T 09-03-2017 IPR020575 Heat shock protein Hsp90, N-terminal RG43_RS18615 46be049f6f54705e4e4750ffc9649e9d 624 PRINTS PR00775 90kDa heat shock protein signature 93 110 2.3E-64 T 09-03-2017 IPR020575 Heat shock protein Hsp90, N-terminal RG43_RS18615 46be049f6f54705e4e4750ffc9649e9d 624 PRINTS PR00775 90kDa heat shock protein signature 172 189 2.3E-64 T 09-03-2017 IPR020575 Heat shock protein Hsp90, N-terminal RG43_RS18615 46be049f6f54705e4e4750ffc9649e9d 624 PRINTS PR00775 90kDa heat shock protein signature 5 25 2.3E-64 T 09-03-2017 IPR020575 Heat shock protein Hsp90, N-terminal RG43_RS18615 46be049f6f54705e4e4750ffc9649e9d 624 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 25 34 - T 09-03-2017 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 RG43_RS18615 46be049f6f54705e4e4750ffc9649e9d 624 SUPERFAMILY SSF55874 4 213 1.22E-67 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS18615 46be049f6f54705e4e4750ffc9649e9d 624 SUPERFAMILY SSF54211 230 485 1.44E-103 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold RG43_RS18615 46be049f6f54705e4e4750ffc9649e9d 624 Hamap MF_00505 Chaperone protein HtpG [htpG]. 2 623 33.248 T 09-03-2017 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 RG43_RS18615 46be049f6f54705e4e4750ffc9649e9d 624 PIRSF PIRSF002583 1 624 1.5E-220 T 09-03-2017 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 RG43_RS18615 46be049f6f54705e4e4750ffc9649e9d 624 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 182 2.2E-15 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS18615 46be049f6f54705e4e4750ffc9649e9d 624 SMART SM00387 27 184 1.1E-12 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS20635 e8cd2b09ad65623d0bbb2d02485e3fcb 398 PIRSF PIRSF006205 1 398 4.7E-161 T 09-03-2017 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 RG43_RS20635 e8cd2b09ad65623d0bbb2d02485e3fcb 398 Gene3D G3DSA:1.10.1740.10 313 395 9.0E-31 T 09-03-2017 RG43_RS20635 e8cd2b09ad65623d0bbb2d02485e3fcb 398 SUPERFAMILY SSF69055 301 393 1.7E-30 T 09-03-2017 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 RG43_RS20635 e8cd2b09ad65623d0bbb2d02485e3fcb 398 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 392 47.544 T 09-03-2017 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 RG43_RS20635 e8cd2b09ad65623d0bbb2d02485e3fcb 398 Gene3D G3DSA:3.40.50.720 1 150 2.6E-60 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS20635 e8cd2b09ad65623d0bbb2d02485e3fcb 398 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 5.8E-36 T 09-03-2017 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 RG43_RS20635 e8cd2b09ad65623d0bbb2d02485e3fcb 398 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 397 1.5E-199 T 09-03-2017 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 RG43_RS20635 e8cd2b09ad65623d0bbb2d02485e3fcb 398 SUPERFAMILY SSF55347 126 274 1.11E-62 T 09-03-2017 RG43_RS20635 e8cd2b09ad65623d0bbb2d02485e3fcb 398 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 7.4E-50 T 09-03-2017 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 RG43_RS20635 e8cd2b09ad65623d0bbb2d02485e3fcb 398 SUPERFAMILY SSF51735 2 150 1.27E-48 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS20635 e8cd2b09ad65623d0bbb2d02485e3fcb 398 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 387 1.7E-41 T 09-03-2017 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 RG43_RS26740 b6f37294ac79ad07ab6e5c38fd28e2a8 254 Gene3D G3DSA:1.10.10.10 2 74 8.5E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS26740 b6f37294ac79ad07ab6e5c38fd28e2a8 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 1.6E-7 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS26740 b6f37294ac79ad07ab6e5c38fd28e2a8 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 1.6E-7 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS26740 b6f37294ac79ad07ab6e5c38fd28e2a8 254 SMART SM00345 12 71 5.2E-10 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS26740 b6f37294ac79ad07ab6e5c38fd28e2a8 254 Pfam PF07729 FCD domain 96 226 3.2E-22 T 09-03-2017 IPR011711 GntR, C-terminal RG43_RS26740 b6f37294ac79ad07ab6e5c38fd28e2a8 254 Gene3D G3DSA:1.20.120.530 91 235 1.1E-27 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal RG43_RS26740 b6f37294ac79ad07ab6e5c38fd28e2a8 254 SUPERFAMILY SSF48008 93 233 3.66E-24 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal RG43_RS26740 b6f37294ac79ad07ab6e5c38fd28e2a8 254 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 69 1.3E-13 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS26740 b6f37294ac79ad07ab6e5c38fd28e2a8 254 SUPERFAMILY SSF46785 4 75 5.87E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS26740 b6f37294ac79ad07ab6e5c38fd28e2a8 254 SMART SM00895 96 227 1.3E-20 T 09-03-2017 IPR011711 GntR, C-terminal RG43_RS04365 b6f37294ac79ad07ab6e5c38fd28e2a8 254 Gene3D G3DSA:1.10.10.10 2 74 8.5E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS04365 b6f37294ac79ad07ab6e5c38fd28e2a8 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 1.6E-7 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS04365 b6f37294ac79ad07ab6e5c38fd28e2a8 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 1.6E-7 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS04365 b6f37294ac79ad07ab6e5c38fd28e2a8 254 SMART SM00345 12 71 5.2E-10 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS04365 b6f37294ac79ad07ab6e5c38fd28e2a8 254 Pfam PF07729 FCD domain 96 226 3.2E-22 T 09-03-2017 IPR011711 GntR, C-terminal RG43_RS04365 b6f37294ac79ad07ab6e5c38fd28e2a8 254 Gene3D G3DSA:1.20.120.530 91 235 1.1E-27 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal RG43_RS04365 b6f37294ac79ad07ab6e5c38fd28e2a8 254 SUPERFAMILY SSF48008 93 233 3.66E-24 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal RG43_RS04365 b6f37294ac79ad07ab6e5c38fd28e2a8 254 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 69 1.3E-13 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS04365 b6f37294ac79ad07ab6e5c38fd28e2a8 254 SUPERFAMILY SSF46785 4 75 5.87E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS04365 b6f37294ac79ad07ab6e5c38fd28e2a8 254 SMART SM00895 96 227 1.3E-20 T 09-03-2017 IPR011711 GntR, C-terminal RG43_RS01285 c5a7cc329949ccf0d1441db6d5c9f603 110 Gene3D G3DSA:1.10.890.10 22 110 2.2E-42 T 09-03-2017 IPR010486 HNS-dependent expression A/B RG43_RS01285 c5a7cc329949ccf0d1441db6d5c9f603 110 SUPERFAMILY SSF47752 30 108 1.83E-43 T 09-03-2017 IPR024972 HNS-dependent expression A GO:0030288|GO:0071468 RG43_RS01285 c5a7cc329949ccf0d1441db6d5c9f603 110 PIRSF PIRSF009564 1 107 8.7E-60 T 09-03-2017 IPR024972 HNS-dependent expression A GO:0030288|GO:0071468 RG43_RS01285 c5a7cc329949ccf0d1441db6d5c9f603 110 ProDom PD065392 HDEA PRECURSOR SIGNAL PERIPLASMIC 3D-STRUCTURE DIRECT 10K-S SEQUENCING 38 108 4.0E-34 T 09-03-2017 IPR024972 HNS-dependent expression A GO:0030288|GO:0071468 RG43_RS01285 c5a7cc329949ccf0d1441db6d5c9f603 110 Hamap MF_00946 Acid stress chaperone HdeA [hdeA]. 1 106 35.073 T 09-03-2017 IPR024972 HNS-dependent expression A GO:0030288|GO:0071468 RG43_RS01285 c5a7cc329949ccf0d1441db6d5c9f603 110 Pfam PF06411 HdeA/HdeB family 12 96 5.9E-27 T 09-03-2017 IPR010486 HNS-dependent expression A/B RG43_RS05390 be638b9403266ceae2e253b4a51f09c2 1032 SUPERFAMILY SSF51971 551 786 9.42E-49 T 09-03-2017 RG43_RS05390 be638b9403266ceae2e253b4a51f09c2 1032 TIGRFAM TIGR03315 Se_ygfK: putative selenate reductase, YgfK subunit 2 1027 0.0 T 09-03-2017 IPR017701 Putative selenate reductase YgfK RG43_RS05390 be638b9403266ceae2e253b4a51f09c2 1032 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 453 532 6.8E-16 T 09-03-2017 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 RG43_RS05390 be638b9403266ceae2e253b4a51f09c2 1032 Gene3D G3DSA:3.50.50.60 776 851 4.1E-10 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS05390 be638b9403266ceae2e253b4a51f09c2 1032 SUPERFAMILY SSF46548 394 561 3.3E-20 T 09-03-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 RG43_RS05390 be638b9403266ceae2e253b4a51f09c2 1032 Gene3D G3DSA:3.50.50.60 549 628 2.0E-14 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS05390 be638b9403266ceae2e253b4a51f09c2 1032 PRINTS PR00419 Adrenodoxin reductase family signature 575 588 3.3E-16 T 09-03-2017 RG43_RS05390 be638b9403266ceae2e253b4a51f09c2 1032 PRINTS PR00419 Adrenodoxin reductase family signature 552 574 3.3E-16 T 09-03-2017 RG43_RS05390 be638b9403266ceae2e253b4a51f09c2 1032 PRINTS PR00419 Adrenodoxin reductase family signature 681 695 3.3E-16 T 09-03-2017 RG43_RS05390 be638b9403266ceae2e253b4a51f09c2 1032 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 552 840 1.9E-46 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS05390 be638b9403266ceae2e253b4a51f09c2 1032 SUPERFAMILY SSF46548 871 963 6.8E-10 T 09-03-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 RG43_RS05390 be638b9403266ceae2e253b4a51f09c2 1032 Gene3D G3DSA:1.10.1060.10 888 952 6.2E-12 T 09-03-2017 RG43_RS05390 be638b9403266ceae2e253b4a51f09c2 1032 Gene3D G3DSA:1.10.1060.10 417 548 4.4E-25 T 09-03-2017 RG43_RS05390 be638b9403266ceae2e253b4a51f09c2 1032 SUPERFAMILY SSF51395 205 257 3.3E-12 T 09-03-2017 RG43_RS05390 be638b9403266ceae2e253b4a51f09c2 1032 SUPERFAMILY SSF51395 287 405 3.3E-12 T 09-03-2017 RG43_RS05390 be638b9403266ceae2e253b4a51f09c2 1032 SUPERFAMILY SSF51395 44 140 3.3E-12 T 09-03-2017 RG43_RS05390 be638b9403266ceae2e253b4a51f09c2 1032 Gene3D G3DSA:3.20.20.70 293 367 8.2E-6 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS05390 be638b9403266ceae2e253b4a51f09c2 1032 Gene3D G3DSA:3.20.20.70 154 260 8.2E-6 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS05390 be638b9403266ceae2e253b4a51f09c2 1032 Gene3D G3DSA:3.20.20.70 43 88 8.2E-6 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS05390 be638b9403266ceae2e253b4a51f09c2 1032 Gene3D G3DSA:3.50.50.60 634 775 6.9E-38 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS05390 be638b9403266ceae2e253b4a51f09c2 1032 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 938 949 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS22410 9c1b74b190c17b497e2aaf5766141aef 286 Gene3D G3DSA:3.40.50.720 2 218 3.9E-41 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS22410 9c1b74b190c17b497e2aaf5766141aef 286 Pfam PF05368 NmrA-like family 2 220 1.9E-24 T 09-03-2017 IPR008030 NmrA-like domain Reactome: R-HSA-70635 RG43_RS22410 9c1b74b190c17b497e2aaf5766141aef 286 SUPERFAMILY SSF51735 2 252 1.5E-62 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS14205 109deaa20b09e1775a6d176dc7dbfa36 239 PRINTS PR01374 Gram-negative bacterial tonB protein signature 155 176 3.4E-40 T 09-03-2017 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 RG43_RS14205 109deaa20b09e1775a6d176dc7dbfa36 239 PRINTS PR01374 Gram-negative bacterial tonB protein signature 176 194 3.4E-40 T 09-03-2017 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 RG43_RS14205 109deaa20b09e1775a6d176dc7dbfa36 239 PRINTS PR01374 Gram-negative bacterial tonB protein signature 195 212 3.4E-40 T 09-03-2017 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 RG43_RS14205 109deaa20b09e1775a6d176dc7dbfa36 239 PRINTS PR01374 Gram-negative bacterial tonB protein signature 91 101 3.4E-40 T 09-03-2017 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 RG43_RS14205 109deaa20b09e1775a6d176dc7dbfa36 239 Gene3D G3DSA:3.30.1150.10 130 234 3.1E-13 T 09-03-2017 RG43_RS14205 109deaa20b09e1775a6d176dc7dbfa36 239 Pfam PF16031 TonB N-terminal region 33 157 4.7E-36 T 09-03-2017 RG43_RS14205 109deaa20b09e1775a6d176dc7dbfa36 239 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 160 227 4.9E-19 T 09-03-2017 IPR006260 TonB, C-terminal GO:0006810 RG43_RS14205 109deaa20b09e1775a6d176dc7dbfa36 239 SUPERFAMILY SSF74653 153 222 5.62E-22 T 09-03-2017 RG43_RS14205 109deaa20b09e1775a6d176dc7dbfa36 239 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 161 233 3.4E-21 T 09-03-2017 IPR006260 TonB, C-terminal GO:0006810 RG43_RS13225 e5be1262f42caec82e6f3adb8a8aae4e 297 PIRSF PIRSF016184 1 295 1.8E-96 T 09-03-2017 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 RG43_RS13225 e5be1262f42caec82e6f3adb8a8aae4e 297 Gene3D G3DSA:3.10.310.10 128 284 3.1E-48 T 09-03-2017 RG43_RS13225 e5be1262f42caec82e6f3adb8a8aae4e 297 Pfam PF02567 Phenazine biosynthesis-like protein 8 290 2.3E-90 T 09-03-2017 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 RG43_RS13225 e5be1262f42caec82e6f3adb8a8aae4e 297 Gene3D G3DSA:3.10.310.10 1 127 5.8E-42 T 09-03-2017 RG43_RS13225 e5be1262f42caec82e6f3adb8a8aae4e 297 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 1 295 6.6E-132 T 09-03-2017 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 RG43_RS13225 e5be1262f42caec82e6f3adb8a8aae4e 297 SUPERFAMILY SSF54506 1 294 2.09E-67 T 09-03-2017 RG43_RS03435 5ff29563b74530a50780d9f4bebaa4b5 121 Pfam PF05656 Protein of unknown function (DUF805) 11 117 4.0E-35 T 09-03-2017 IPR008523 Protein of unknown function DUF805 GO:0016021 RG43_RS23940 9f581385c1c570e19eb537f7a3a971c4 457 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 2.4E-29 T 09-03-2017 IPR000362 Fumarate lyase family RG43_RS23940 9f581385c1c570e19eb537f7a3a971c4 457 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 2.4E-29 T 09-03-2017 IPR000362 Fumarate lyase family RG43_RS23940 9f581385c1c570e19eb537f7a3a971c4 457 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 2.4E-29 T 09-03-2017 IPR000362 Fumarate lyase family RG43_RS23940 9f581385c1c570e19eb537f7a3a971c4 457 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 2.4E-29 T 09-03-2017 IPR000362 Fumarate lyase family RG43_RS23940 9f581385c1c570e19eb537f7a3a971c4 457 Pfam PF00206 Lyase 6 301 5.3E-101 T 09-03-2017 IPR022761 Fumarate lyase, N-terminal RG43_RS23940 9f581385c1c570e19eb537f7a3a971c4 457 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 2.5E-24 T 09-03-2017 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RG43_RS23940 9f581385c1c570e19eb537f7a3a971c4 457 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 41.679 T 09-03-2017 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RG43_RS23940 9f581385c1c570e19eb537f7a3a971c4 457 Gene3D G3DSA:1.20.200.10 108 374 7.2E-105 T 09-03-2017 RG43_RS23940 9f581385c1c570e19eb537f7a3a971c4 457 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 2.9E-216 T 09-03-2017 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RG43_RS23940 9f581385c1c570e19eb537f7a3a971c4 457 SUPERFAMILY SSF48557 3 456 7.85E-143 T 09-03-2017 IPR008948 L-Aspartase-like GO:0003824 RG43_RS23940 9f581385c1c570e19eb537f7a3a971c4 457 Gene3D G3DSA:1.10.275.10 1 107 1.5E-37 T 09-03-2017 IPR024083 Fumarase/histidase, N-terminal RG43_RS23940 9f581385c1c570e19eb537f7a3a971c4 457 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 09-03-2017 IPR020557 Fumarate lyase, conserved site GO:0003824 RG43_RS23940 9f581385c1c570e19eb537f7a3a971c4 457 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 4.0E-68 T 09-03-2017 RG43_RS23940 9f581385c1c570e19eb537f7a3a971c4 457 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 4.0E-68 T 09-03-2017 RG43_RS23940 9f581385c1c570e19eb537f7a3a971c4 457 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 4.0E-68 T 09-03-2017 RG43_RS23940 9f581385c1c570e19eb537f7a3a971c4 457 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 4.0E-68 T 09-03-2017 RG43_RS23940 9f581385c1c570e19eb537f7a3a971c4 457 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 4.0E-68 T 09-03-2017 RG43_RS23940 9f581385c1c570e19eb537f7a3a971c4 457 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 4.0E-68 T 09-03-2017 RG43_RS23940 9f581385c1c570e19eb537f7a3a971c4 457 Gene3D G3DSA:1.10.40.30 375 432 8.5E-31 T 09-03-2017 RG43_RS06625 8aa6aab1a4cee47b5a9dcf4adfe85617 553 Gene3D G3DSA:3.40.50.300 431 496 3.1E-5 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS06625 8aa6aab1a4cee47b5a9dcf4adfe85617 553 PIRSF PIRSF003128 1 553 1.1E-158 T 09-03-2017 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 RG43_RS06625 8aa6aab1a4cee47b5a9dcf4adfe85617 553 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 552 8.7E-173 T 09-03-2017 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 RG43_RS06625 8aa6aab1a4cee47b5a9dcf4adfe85617 553 SUPERFAMILY SSF52540 1 217 9.43E-68 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS06625 8aa6aab1a4cee47b5a9dcf4adfe85617 553 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 511 1.2E-18 T 09-03-2017 IPR003395 RecF/RecN/SMC, N-terminal RG43_RS06625 8aa6aab1a4cee47b5a9dcf4adfe85617 553 Gene3D G3DSA:3.40.50.300 1 206 5.2E-75 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS06625 8aa6aab1a4cee47b5a9dcf4adfe85617 553 SUPERFAMILY SSF52540 284 507 3.32E-30 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS06625 8aa6aab1a4cee47b5a9dcf4adfe85617 553 SUPERFAMILY SSF52540 4 50 3.32E-30 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS22340 8c45f185b615ccfdadcba458da6cd960 176 Pfam PF00719 Inorganic pyrophosphatase 18 173 3.9E-55 T 09-03-2017 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 RG43_RS22340 8c45f185b615ccfdadcba458da6cd960 176 SUPERFAMILY SSF50324 4 174 6.02E-68 T 09-03-2017 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 RG43_RS22340 8c45f185b615ccfdadcba458da6cd960 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 09-03-2017 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 RG43_RS22340 8c45f185b615ccfdadcba458da6cd960 176 Gene3D G3DSA:3.90.80.10 5 175 2.0E-62 T 09-03-2017 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 RG43_RS22340 8c45f185b615ccfdadcba458da6cd960 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 37.626 T 09-03-2017 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 RG43_RS08765 c0e1253dde259199d4f90ddcf37db47d 287 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 226 237 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS08765 c0e1253dde259199d4f90ddcf37db47d 287 Gene3D G3DSA:3.30.70.20 191 279 1.2E-16 T 09-03-2017 RG43_RS08765 c0e1253dde259199d4f90ddcf37db47d 287 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 24 278 4.7E-117 T 09-03-2017 IPR011886 Ferredoxin-type protein, NapH/MauN family GO:0005506 RG43_RS08765 c0e1253dde259199d4f90ddcf37db47d 287 SUPERFAMILY SSF54862 191 280 6.98E-21 T 09-03-2017 RG43_RS08765 c0e1253dde259199d4f90ddcf37db47d 287 SUPERFAMILY SSF54862 103 143 6.98E-21 T 09-03-2017 RG43_RS08765 c0e1253dde259199d4f90ddcf37db47d 287 Pfam PF12801 4Fe-4S binding domain 83 126 1.4E-12 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS08765 c0e1253dde259199d4f90ddcf37db47d 287 Pfam PF12801 4Fe-4S binding domain 178 211 7.2E-5 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS08765 c0e1253dde259199d4f90ddcf37db47d 287 Pfam PF13237 4Fe-4S dicluster domain 221 270 6.1E-7 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS20230 f3f4e3ec2113d35bbecfc99785ed16db 329 Gene3D G3DSA:3.40.50.1980 28 146 1.5E-10 T 09-03-2017 RG43_RS20230 f3f4e3ec2113d35bbecfc99785ed16db 329 SUPERFAMILY SSF53807 28 327 7.06E-49 T 09-03-2017 RG43_RS20230 f3f4e3ec2113d35bbecfc99785ed16db 329 Pfam PF01497 Periplasmic binding protein 29 264 1.9E-22 T 09-03-2017 IPR002491 ABC transporter periplasmic binding domain GO:0005488 RG43_RS20230 f3f4e3ec2113d35bbecfc99785ed16db 329 Gene3D G3DSA:3.40.50.1980 147 305 1.7E-30 T 09-03-2017 RG43_RS26090 281194d83c810fb2a971bf8f1d3eaf22 839 Pfam PF07057 DNA helicase TraI 517 635 2.8E-56 T 09-03-2017 IPR009767 DNA helicase, TraI type GO:0000746|GO:0003677|GO:0003678|GO:0005524|GO:0016818 RG43_RS26090 281194d83c810fb2a971bf8f1d3eaf22 839 Gene3D G3DSA:3.40.50.300 20 228 1.2E-26 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS26090 281194d83c810fb2a971bf8f1d3eaf22 839 Pfam PF13604 AAA domain 52 239 5.1E-35 T 09-03-2017 RG43_RS26090 281194d83c810fb2a971bf8f1d3eaf22 839 SUPERFAMILY SSF52540 416 541 3.19E-26 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS26090 281194d83c810fb2a971bf8f1d3eaf22 839 SUPERFAMILY SSF52540 306 338 3.19E-26 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS26090 281194d83c810fb2a971bf8f1d3eaf22 839 SUPERFAMILY SSF52540 172 230 3.19E-26 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS26090 281194d83c810fb2a971bf8f1d3eaf22 839 SUPERFAMILY SSF52540 21 194 4.59E-20 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS20455 f1f0c3adca141614555cc303d34762b4 267 PIRSF PIRSF000097 1 265 5.9E-67 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RG43_RS20455 f1f0c3adca141614555cc303d34762b4 267 SUPERFAMILY SSF51430 2 257 3.8E-81 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain RG43_RS20455 f1f0c3adca141614555cc303d34762b4 267 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 114 131 - T 09-03-2017 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 RG43_RS20455 f1f0c3adca141614555cc303d34762b4 267 Pfam PF00248 Aldo/keto reductase family 9 250 5.0E-49 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain RG43_RS20455 f1f0c3adca141614555cc303d34762b4 267 Gene3D G3DSA:3.20.20.100 1 259 5.1E-88 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain RG43_RS20455 f1f0c3adca141614555cc303d34762b4 267 PRINTS PR00069 Aldo-keto reductase signature 149 178 4.2E-44 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RG43_RS20455 f1f0c3adca141614555cc303d34762b4 267 PRINTS PR00069 Aldo-keto reductase signature 186 210 4.2E-44 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RG43_RS20455 f1f0c3adca141614555cc303d34762b4 267 PRINTS PR00069 Aldo-keto reductase signature 25 49 4.2E-44 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RG43_RS20455 f1f0c3adca141614555cc303d34762b4 267 PRINTS PR00069 Aldo-keto reductase signature 81 99 4.2E-44 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RG43_RS20455 f1f0c3adca141614555cc303d34762b4 267 PRINTS PR00069 Aldo-keto reductase signature 114 131 4.2E-44 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RG43_RS11740 7d791ccfa3356359facd9673f209c23a 644 PIRSF PIRSF000549 1 644 3.1E-293 T 09-03-2017 IPR016230 Serine-protein kinase, PrkA GO:0004672 RG43_RS11740 7d791ccfa3356359facd9673f209c23a 644 Pfam PF08298 PrkA AAA domain 20 380 2.1E-180 T 09-03-2017 IPR013153 PrkA AAA domain RG43_RS11740 7d791ccfa3356359facd9673f209c23a 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 1.7E-76 T 09-03-2017 IPR010650 PrkA C-terminal domain RG43_RS11740 7d791ccfa3356359facd9673f209c23a 644 SUPERFAMILY SSF52540 241 368 3.57E-16 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS11740 7d791ccfa3356359facd9673f209c23a 644 SUPERFAMILY SSF52540 75 154 3.57E-16 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS11740 7d791ccfa3356359facd9673f209c23a 644 Gene3D G3DSA:3.40.50.300 75 158 2.0E-8 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS11740 7d791ccfa3356359facd9673f209c23a 644 Gene3D G3DSA:3.40.50.300 243 329 2.0E-8 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS11740 7d791ccfa3356359facd9673f209c23a 644 SMART SM00763 19 380 1.2E-217 T 09-03-2017 IPR013153 PrkA AAA domain RG43_RS00515 34270b1049a87a8cb4c8721fd233db61 238 SUPERFAMILY SSF55666 153 236 2.88E-26 T 09-03-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 RG43_RS00515 34270b1049a87a8cb4c8721fd233db61 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 2.2E-24 T 09-03-2017 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 RG43_RS00515 34270b1049a87a8cb4c8721fd233db61 238 SUPERFAMILY SSF54211 1 181 4.2E-46 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold RG43_RS00515 34270b1049a87a8cb4c8721fd233db61 238 Pfam PF03725 3' exoribonuclease family, domain 2 157 222 1.6E-12 T 09-03-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 RG43_RS00515 34270b1049a87a8cb4c8721fd233db61 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 5.1E-115 T 09-03-2017 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 RG43_RS00515 34270b1049a87a8cb4c8721fd233db61 238 Gene3D G3DSA:3.30.230.70 9 237 1.9E-35 T 09-03-2017 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 RG43_RS00515 34270b1049a87a8cb4c8721fd233db61 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 09-03-2017 IPR018336 Ribonuclease PH, conserved site RG43_RS00515 34270b1049a87a8cb4c8721fd233db61 238 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 50.036 T 09-03-2017 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 RG43_RS02470 b3f2d60e9479262be013fc0afb0be596 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 3.0E-55 T 09-03-2017 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS02470 b3f2d60e9479262be013fc0afb0be596 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 09-03-2017 IPR018102 Ribosomal S11, conserved site RG43_RS02470 b3f2d60e9479262be013fc0afb0be596 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 7 129 32.678 T 09-03-2017 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RG43_RS02470 b3f2d60e9479262be013fc0afb0be596 129 Pfam PF00411 Ribosomal protein S11 19 128 1.9E-54 T 09-03-2017 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RG43_RS02470 b3f2d60e9479262be013fc0afb0be596 129 Gene3D G3DSA:3.30.420.80 9 129 1.4E-54 T 09-03-2017 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RG43_RS02470 b3f2d60e9479262be013fc0afb0be596 129 SUPERFAMILY SSF53137 14 129 6.08E-48 T 09-03-2017 RG43_RS02470 b3f2d60e9479262be013fc0afb0be596 129 PIRSF PIRSF002131 1 129 5.9E-53 T 09-03-2017 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RG43_RS08125 fa89d4773f00f04e8f5f899907236d26 361 Pfam PF01264 Chorismate synthase 10 345 1.7E-143 T 09-03-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 RG43_RS08125 fa89d4773f00f04e8f5f899907236d26 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 09-03-2017 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 RG43_RS08125 fa89d4773f00f04e8f5f899907236d26 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 2.1E-140 T 09-03-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 RG43_RS08125 fa89d4773f00f04e8f5f899907236d26 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.971 T 09-03-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 RG43_RS08125 fa89d4773f00f04e8f5f899907236d26 361 SUPERFAMILY SSF103263 4 353 2.62E-149 T 09-03-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 RG43_RS08125 fa89d4773f00f04e8f5f899907236d26 361 PIRSF PIRSF001456 3 359 1.8E-142 T 09-03-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 RG43_RS08125 fa89d4773f00f04e8f5f899907236d26 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 09-03-2017 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 RG43_RS08125 fa89d4773f00f04e8f5f899907236d26 361 Gene3D G3DSA:3.60.150.10 9 352 1.2E-161 T 09-03-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 RG43_RS08125 fa89d4773f00f04e8f5f899907236d26 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 09-03-2017 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 RG43_RS07315 03976b836c485a5ee89901e09d2fb723 208 SUPERFAMILY SSF53271 4 206 3.02E-66 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like RG43_RS07315 03976b836c485a5ee89901e09d2fb723 208 Gene3D G3DSA:3.40.50.2020 2 208 5.0E-75 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like RG43_RS07315 03976b836c485a5ee89901e09d2fb723 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 8.7E-65 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like RG43_RS07315 03976b836c485a5ee89901e09d2fb723 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.829 T 09-03-2017 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 RG43_RS07315 03976b836c485a5ee89901e09d2fb723 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 208 4.1E-90 T 09-03-2017 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 RG43_RS05920 72978632c51f18b6449e7f060a82d213 918 SUPERFAMILY SSF47226 764 777 7.33E-22 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RG43_RS05920 72978632c51f18b6449e7f060a82d213 918 SUPERFAMILY SSF47226 808 909 7.33E-22 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RG43_RS05920 72978632c51f18b6449e7f060a82d213 918 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 31 177 6.0E-55 T 09-03-2017 IPR019247 Histidine kinase BarA, N-terminal RG43_RS05920 72978632c51f18b6449e7f060a82d213 918 Gene3D G3DSA:1.10.287.130 284 342 6.5E-19 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS05920 72978632c51f18b6449e7f060a82d213 918 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 498 9.9E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS05920 72978632c51f18b6449e7f060a82d213 918 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 517 9.9E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS05920 72978632c51f18b6449e7f060a82d213 918 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 459 9.9E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS05920 72978632c51f18b6449e7f060a82d213 918 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 473 9.9E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS05920 72978632c51f18b6449e7f060a82d213 918 Pfam PF00512 His Kinase A (phospho-acceptor) domain 293 357 2.2E-20 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS05920 72978632c51f18b6449e7f060a82d213 918 SUPERFAMILY SSF47384 277 358 1.96E-22 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS05920 72978632c51f18b6449e7f060a82d213 918 SUPERFAMILY SSF52172 668 785 3.7E-35 T 09-03-2017 IPR011006 CheY-like superfamily RG43_RS05920 72978632c51f18b6449e7f060a82d213 918 SMART SM00387 404 520 2.3E-37 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS05920 72978632c51f18b6449e7f060a82d213 918 SUPERFAMILY SSF158472 200 249 7.45E-5 T 09-03-2017 RG43_RS05920 72978632c51f18b6449e7f060a82d213 918 Pfam PF01627 Hpt domain 828 908 1.3E-12 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RG43_RS05920 72978632c51f18b6449e7f060a82d213 918 Gene3D G3DSA:3.30.565.10 343 518 2.1E-44 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS05920 72978632c51f18b6449e7f060a82d213 918 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 404 519 3.0E-30 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS05920 72978632c51f18b6449e7f060a82d213 918 SMART SM00073 819 914 1.6E-23 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RG43_RS05920 72978632c51f18b6449e7f060a82d213 918 Gene3D G3DSA:1.20.120.160 820 916 1.7E-20 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RG43_RS05920 72978632c51f18b6449e7f060a82d213 918 Gene3D G3DSA:3.40.50.2300 668 783 5.5E-37 T 09-03-2017 RG43_RS05920 72978632c51f18b6449e7f060a82d213 918 SUPERFAMILY SSF55874 346 516 8.38E-44 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS05920 72978632c51f18b6449e7f060a82d213 918 SMART SM00388 292 357 1.2E-25 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS05920 72978632c51f18b6449e7f060a82d213 918 Pfam PF00072 Response regulator receiver domain 670 780 3.4E-29 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS05920 72978632c51f18b6449e7f060a82d213 918 Pfam PF00672 HAMP domain 181 248 1.4E-11 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RG43_RS05920 72978632c51f18b6449e7f060a82d213 918 SMART SM00304 200 252 1.7E-7 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RG43_RS05920 72978632c51f18b6449e7f060a82d213 918 SMART SM00448 668 781 4.9E-33 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS08265 09349b3c1f4c4e66af5187f7be306f9e 215 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 81 1.3E-13 T 09-03-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RG43_RS08265 09349b3c1f4c4e66af5187f7be306f9e 215 Pfam PF00043 Glutathione S-transferase, C-terminal domain 135 197 1.0E-10 T 09-03-2017 IPR004046 Glutathione S-transferase, C-terminal RG43_RS08265 09349b3c1f4c4e66af5187f7be306f9e 215 Gene3D G3DSA:3.40.30.10 1 83 9.0E-27 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS08265 09349b3c1f4c4e66af5187f7be306f9e 215 SUPERFAMILY SSF47616 78 201 1.91E-33 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like RG43_RS08265 09349b3c1f4c4e66af5187f7be306f9e 215 Gene3D G3DSA:1.20.1050.10 84 198 1.1E-47 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like RG43_RS08265 09349b3c1f4c4e66af5187f7be306f9e 215 SUPERFAMILY SSF52833 1 84 1.06E-21 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS14900 d706eabafd7b31542893dc81d162a73c 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 282 1.5E-17 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS14900 d706eabafd7b31542893dc81d162a73c 285 Gene3D G3DSA:1.10.3720.10 3 273 2.1E-46 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS14900 d706eabafd7b31542893dc81d162a73c 285 SUPERFAMILY SSF161098 6 274 8.63E-53 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS17725 884a1f2ffa4258b2a97a4732ced1b997 266 Gene3D G3DSA:3.40.50.1360 1 264 1.4E-112 T 09-03-2017 RG43_RS17725 884a1f2ffa4258b2a97a4732ced1b997 266 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 1.5E-144 T 09-03-2017 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 RG43_RS17725 884a1f2ffa4258b2a97a4732ced1b997 266 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 09-03-2017 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 RG43_RS17725 884a1f2ffa4258b2a97a4732ced1b997 266 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 224 5.9E-22 T 09-03-2017 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 RG43_RS17725 884a1f2ffa4258b2a97a4732ced1b997 266 SUPERFAMILY SSF100950 1 263 6.7E-105 T 09-03-2017 RG43_RS17725 884a1f2ffa4258b2a97a4732ced1b997 266 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 40.893 T 09-03-2017 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 RG43_RS05895 01562c84d94752e2090587374628d6ef 149 Gene3D G3DSA:3.40.50.360 1 147 1.9E-34 T 09-03-2017 IPR029039 Flavoprotein-like domain RG43_RS05895 01562c84d94752e2090587374628d6ef 149 SUPERFAMILY SSF52218 1 148 1.93E-38 T 09-03-2017 IPR029039 Flavoprotein-like domain RG43_RS05895 01562c84d94752e2090587374628d6ef 149 Pfam PF00258 Flavodoxin 6 140 2.2E-24 T 09-03-2017 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 RG43_RS05895 01562c84d94752e2090587374628d6ef 149 PRINTS PR00369 Flavodoxin signature 53 64 2.2E-6 T 09-03-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 RG43_RS05895 01562c84d94752e2090587374628d6ef 149 PRINTS PR00369 Flavodoxin signature 108 127 2.2E-6 T 09-03-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 RG43_RS05895 01562c84d94752e2090587374628d6ef 149 PRINTS PR00369 Flavodoxin signature 84 94 2.2E-6 T 09-03-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 RG43_RS11220 865aeba049510fa41d5c2c79e03b0e11 246 Gene3D G3DSA:3.30.1270.10 211 245 3.5E-42 T 09-03-2017 IPR026563 Transcriptional regulator TACO1-like, domain 2 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RG43_RS11220 865aeba049510fa41d5c2c79e03b0e11 246 Gene3D G3DSA:3.30.1270.10 82 134 3.5E-42 T 09-03-2017 IPR026563 Transcriptional regulator TACO1-like, domain 2 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RG43_RS11220 865aeba049510fa41d5c2c79e03b0e11 246 Gene3D G3DSA:1.10.10.200 1 79 7.0E-35 T 09-03-2017 IPR017856 Integrase, N-terminal zinc-binding domain-like RG43_RS11220 865aeba049510fa41d5c2c79e03b0e11 246 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 238 36.763 T 09-03-2017 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RG43_RS11220 865aeba049510fa41d5c2c79e03b0e11 246 SUPERFAMILY SSF75625 3 244 7.19E-98 T 09-03-2017 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RG43_RS11220 865aeba049510fa41d5c2c79e03b0e11 246 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 236 1.5E-107 T 09-03-2017 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RG43_RS11220 865aeba049510fa41d5c2c79e03b0e11 246 Gene3D G3DSA:3.30.70.980 135 204 7.2E-31 T 09-03-2017 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RG43_RS11220 865aeba049510fa41d5c2c79e03b0e11 246 Pfam PF01709 Transcriptional regulator 5 235 2.5E-94 T 09-03-2017 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RG43_RS09670 cbbcf11d2b6cdffc4f38ef06bbcb6b22 297 Gene3D G3DSA:3.90.550.10 3 228 1.8E-25 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS09670 cbbcf11d2b6cdffc4f38ef06bbcb6b22 297 Pfam PF00535 Glycosyl transferase family 2 6 147 5.7E-10 T 09-03-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RG43_RS09670 cbbcf11d2b6cdffc4f38ef06bbcb6b22 297 SUPERFAMILY SSF53448 3 258 1.24E-27 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS14955 6d65a0d25798d5decc07123808091134 1148 Pfam PF00270 DEAD/DEAH box helicase 602 762 7.5E-21 T 09-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RG43_RS14955 6d65a0d25798d5decc07123808091134 1148 SUPERFAMILY SSF141259 467 545 1.57E-23 T 09-03-2017 IPR003711 CarD-like/TRCF domain RG43_RS14955 6d65a0d25798d5decc07123808091134 1148 SMART SM00982 1005 1105 1.9E-49 T 09-03-2017 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 RG43_RS14955 6d65a0d25798d5decc07123808091134 1148 Pfam PF02559 CarD-like/TRCF domain 477 572 2.3E-24 T 09-03-2017 IPR003711 CarD-like/TRCF domain RG43_RS14955 6d65a0d25798d5decc07123808091134 1148 Pfam PF00271 Helicase conserved C-terminal domain 803 906 1.7E-18 T 09-03-2017 IPR001650 Helicase, C-terminal RG43_RS14955 6d65a0d25798d5decc07123808091134 1148 SUPERFAMILY SSF52540 352 463 3.98E-27 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS14955 6d65a0d25798d5decc07123808091134 1148 SMART SM01058 476 573 3.1E-50 T 09-03-2017 IPR003711 CarD-like/TRCF domain RG43_RS14955 6d65a0d25798d5decc07123808091134 1148 Gene3D G3DSA:3.40.50.300 795 960 2.6E-36 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS14955 6d65a0d25798d5decc07123808091134 1148 Gene3D G3DSA:3.40.50.300 585 783 2.0E-58 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS14955 6d65a0d25798d5decc07123808091134 1148 Pfam PF03461 TRCF domain 1006 1098 2.4E-28 T 09-03-2017 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 RG43_RS14955 6d65a0d25798d5decc07123808091134 1148 SMART SM00490 823 907 1.6E-19 T 09-03-2017 IPR001650 Helicase, C-terminal RG43_RS14955 6d65a0d25798d5decc07123808091134 1148 SUPERFAMILY SSF143517 992 1144 1.57E-44 T 09-03-2017 RG43_RS14955 6d65a0d25798d5decc07123808091134 1148 Gene3D G3DSA:3.30.2060.10 130 207 1.8E-13 T 09-03-2017 RG43_RS14955 6d65a0d25798d5decc07123808091134 1148 SUPERFAMILY SSF52540 779 987 2.95E-49 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS14955 6d65a0d25798d5decc07123808091134 1148 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 145 1079 0.0 T 09-03-2017 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 RG43_RS14955 6d65a0d25798d5decc07123808091134 1148 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 31 1125 28.928 T 09-03-2017 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 RG43_RS14955 6d65a0d25798d5decc07123808091134 1148 SUPERFAMILY SSF52540 520 780 1.65E-64 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS14955 6d65a0d25798d5decc07123808091134 1148 SUPERFAMILY SSF52540 10 343 3.26E-101 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS14955 6d65a0d25798d5decc07123808091134 1148 SMART SM00487 597 787 6.4E-36 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain RG43_RS18135 d77cc8ee9dbe5a897aefc78ff29754a9 334 SUPERFAMILY SSF81345 9 328 1.57E-74 T 09-03-2017 IPR029022 ABC transporter, BtuC-like RG43_RS18135 d77cc8ee9dbe5a897aefc78ff29754a9 334 Pfam PF01032 FecCD transport family 19 328 6.0E-90 T 09-03-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 RG43_RS18135 d77cc8ee9dbe5a897aefc78ff29754a9 334 Gene3D G3DSA:1.10.3470.10 10 331 1.1E-96 T 09-03-2017 IPR029022 ABC transporter, BtuC-like RG43_RS02160 9a58754a5c561c0784b75360a962f090 210 SUPERFAMILY SSF51206 8 136 1.07E-35 T 09-03-2017 IPR018490 Cyclic nucleotide-binding-like RG43_RS02160 9a58754a5c561c0784b75360a962f090 210 SMART SM00100 2 122 7.6E-27 T 09-03-2017 IPR000595 Cyclic nucleotide-binding domain RG43_RS02160 9a58754a5c561c0784b75360a962f090 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 8.8E-11 T 09-03-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RG43_RS02160 9a58754a5c561c0784b75360a962f090 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 8.8E-11 T 09-03-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RG43_RS02160 9a58754a5c561c0784b75360a962f090 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 09-03-2017 IPR018488 Cyclic nucleotide-binding, conserved site RG43_RS02160 9a58754a5c561c0784b75360a962f090 210 Gene3D G3DSA:1.10.10.10 144 207 1.1E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS02160 9a58754a5c561c0784b75360a962f090 210 SMART SM00419 160 208 4.5E-17 T 09-03-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RG43_RS02160 9a58754a5c561c0784b75360a962f090 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 09-03-2017 IPR018488 Cyclic nucleotide-binding, conserved site RG43_RS02160 9a58754a5c561c0784b75360a962f090 210 SUPERFAMILY SSF46785 139 207 3.64E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS02160 9a58754a5c561c0784b75360a962f090 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 09-03-2017 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 RG43_RS02160 9a58754a5c561c0784b75360a962f090 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 6.4E-24 T 09-03-2017 IPR000595 Cyclic nucleotide-binding domain RG43_RS02160 9a58754a5c561c0784b75360a962f090 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 1.7E-15 T 09-03-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RG43_RS02160 9a58754a5c561c0784b75360a962f090 210 Gene3D G3DSA:2.60.120.10 6 143 1.1E-44 T 09-03-2017 IPR014710 RmlC-like jelly roll fold RG43_RS13880 d292af48e54c820a57eed7a3b37205a0 325 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 8 323 9.6E-162 T 09-03-2017 IPR014317 Transcription activator PspF RG43_RS13880 d292af48e54c820a57eed7a3b37205a0 325 Gene3D G3DSA:3.40.50.300 6 179 2.6E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS13880 d292af48e54c820a57eed7a3b37205a0 325 SUPERFAMILY SSF46689 222 325 2.37E-6 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS13880 d292af48e54c820a57eed7a3b37205a0 325 SMART SM00382 28 180 2.9E-10 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS13880 d292af48e54c820a57eed7a3b37205a0 325 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 94 109 - T 09-03-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RG43_RS13880 d292af48e54c820a57eed7a3b37205a0 325 Gene3D G3DSA:1.10.8.60 180 252 5.6E-22 T 09-03-2017 RG43_RS13880 d292af48e54c820a57eed7a3b37205a0 325 Pfam PF02954 Bacterial regulatory protein, Fis family 286 322 5.0E-5 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RG43_RS13880 d292af48e54c820a57eed7a3b37205a0 325 SUPERFAMILY SSF52540 9 250 7.56E-66 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS13880 d292af48e54c820a57eed7a3b37205a0 325 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 289 306 6.1E-6 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RG43_RS13880 d292af48e54c820a57eed7a3b37205a0 325 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 306 325 6.1E-6 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RG43_RS13880 d292af48e54c820a57eed7a3b37205a0 325 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 222 231 - T 09-03-2017 IPR025944 Sigma-54 interaction domain, conserved site RG43_RS13880 d292af48e54c820a57eed7a3b37205a0 325 Gene3D G3DSA:1.10.10.60 278 325 3.9E-6 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS13880 d292af48e54c820a57eed7a3b37205a0 325 Pfam PF00158 Sigma-54 interaction domain 9 170 2.0E-62 T 09-03-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RG43_RS00480 e9c7308db07449ea2716124d80ee40c4 702 Pfam PF13291 ACT domain 622 699 4.3E-17 T 09-03-2017 IPR002912 ACT domain GO:0008152|GO:0016597 RG43_RS00480 e9c7308db07449ea2716124d80ee40c4 702 Pfam PF02824 TGS domain 388 447 1.7E-21 T 09-03-2017 IPR004095 TGS KEGG: 00970+6.1.1.3 RG43_RS00480 e9c7308db07449ea2716124d80ee40c4 702 SUPERFAMILY SSF55021 627 699 1.51E-5 T 09-03-2017 RG43_RS00480 e9c7308db07449ea2716124d80ee40c4 702 Pfam PF13328 HD domain 26 175 2.9E-53 T 09-03-2017 IPR003607 HD/PDEase domain RG43_RS00480 e9c7308db07449ea2716124d80ee40c4 702 Gene3D G3DSA:3.30.460.10 178 324 5.7E-48 T 09-03-2017 RG43_RS00480 e9c7308db07449ea2716124d80ee40c4 702 SUPERFAMILY SSF109604 3 190 2.7E-75 T 09-03-2017 RG43_RS00480 e9c7308db07449ea2716124d80ee40c4 702 SMART SM00954 235 345 2.8E-63 T 09-03-2017 IPR007685 RelA/SpoT GO:0015969 RG43_RS00480 e9c7308db07449ea2716124d80ee40c4 702 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 9.4E-36 T 09-03-2017 IPR007685 RelA/SpoT GO:0015969 RG43_RS00480 e9c7308db07449ea2716124d80ee40c4 702 SMART SM00471 41 153 1.2E-11 T 09-03-2017 IPR003607 HD/PDEase domain RG43_RS00480 e9c7308db07449ea2716124d80ee40c4 702 Gene3D G3DSA:3.30.70.260 627 697 1.3E-6 T 09-03-2017 RG43_RS00480 e9c7308db07449ea2716124d80ee40c4 702 SUPERFAMILY SSF81301 180 392 1.52E-62 T 09-03-2017 RG43_RS00480 e9c7308db07449ea2716124d80ee40c4 702 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 699 1.3E-294 T 09-03-2017 IPR004811 RelA/SpoT family GO:0015969 RG43_RS00480 e9c7308db07449ea2716124d80ee40c4 702 Gene3D G3DSA:3.10.20.30 387 448 4.1E-23 T 09-03-2017 IPR012675 Beta-grasp domain RG43_RS00480 e9c7308db07449ea2716124d80ee40c4 702 SUPERFAMILY SSF81271 375 447 3.71E-21 T 09-03-2017 IPR012676 TGS-like KEGG: 00970+6.1.1.3 RG43_RS09395 cc8aca4058cb7e5782913c92104101d2 299 Pfam PF00781 Diacylglycerol kinase catalytic domain 8 129 3.2E-27 T 09-03-2017 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 RG43_RS09395 cc8aca4058cb7e5782913c92104101d2 299 TIGRFAM TIGR03702 lip_kinase_YegS: lipid kinase YegS 7 298 2.7E-142 T 09-03-2017 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 RG43_RS09395 cc8aca4058cb7e5782913c92104101d2 299 SUPERFAMILY SSF111331 8 297 1.59E-67 T 09-03-2017 IPR016064 NAD kinase/diacylglycerol kinase-like domain RG43_RS09395 cc8aca4058cb7e5782913c92104101d2 299 SMART SM00046 6 132 1.2E-37 T 09-03-2017 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 RG43_RS09395 cc8aca4058cb7e5782913c92104101d2 299 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 1 293 1.6E-123 T 09-03-2017 IPR005218 Diacylglycerol/lipid kinase RG43_RS09395 cc8aca4058cb7e5782913c92104101d2 299 Hamap MF_01377 Probable lipid kinase YegS [yegS]. 4 299 48.578 T 09-03-2017 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 RG43_RS09075 d688e00df61ce62d9a13c9976dc2a73d 411 SUPERFAMILY SSF54862 310 400 1.21E-21 T 09-03-2017 RG43_RS09075 d688e00df61ce62d9a13c9976dc2a73d 411 Pfam PF14697 4Fe-4S dicluster domain 338 394 3.2E-17 T 09-03-2017 RG43_RS09075 d688e00df61ce62d9a13c9976dc2a73d 411 Pfam PF01180 Dihydroorotate dehydrogenase 6 304 1.2E-34 T 09-03-2017 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 RG43_RS09075 d688e00df61ce62d9a13c9976dc2a73d 411 Gene3D G3DSA:3.30.70.20 324 405 2.9E-16 T 09-03-2017 RG43_RS09075 d688e00df61ce62d9a13c9976dc2a73d 411 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 6 319 7.7E-60 T 09-03-2017 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 RG43_RS09075 d688e00df61ce62d9a13c9976dc2a73d 411 Gene3D G3DSA:3.20.20.70 4 320 3.2E-80 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS09075 d688e00df61ce62d9a13c9976dc2a73d 411 SUPERFAMILY SSF51395 4 319 4.0E-70 T 09-03-2017 RG43_RS09075 d688e00df61ce62d9a13c9976dc2a73d 411 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 378 389 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS15820 5e6a0c788d0c833da07e1ed249e16d3e 150 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 131 3.0E-72 T 09-03-2017 IPR009390 Macrodomain Ter protein, MatP GO:0043565 RG43_RS15820 5e6a0c788d0c833da07e1ed249e16d3e 150 Pfam PF06303 Organiser of macrodomain of Terminus of chromosome 1 147 4.9E-75 T 09-03-2017 IPR009390 Macrodomain Ter protein, MatP GO:0043565 RG43_RS15820 5e6a0c788d0c833da07e1ed249e16d3e 150 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 31.214 T 09-03-2017 IPR009390 Macrodomain Ter protein, MatP GO:0043565 RG43_RS21705 641b094eec9c13e543b311f76ec6fb3d 53 PIRSF PIRSF036466 1 53 8.3E-21 T 09-03-2017 IPR009760 Protein of unknown function DUF1328 GO:0005886 RG43_RS21705 641b094eec9c13e543b311f76ec6fb3d 53 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 2.0E-13 T 09-03-2017 IPR009760 Protein of unknown function DUF1328 GO:0005886 RG43_RS21705 641b094eec9c13e543b311f76ec6fb3d 53 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 52 19.041 T 09-03-2017 IPR009760 Protein of unknown function DUF1328 GO:0005886 RG43_RS23595 f0da1133f1cf4e243ba0499eb36b531f 1227 SUPERFAMILY SSF82282 7 399 1.44E-119 T 09-03-2017 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 RG43_RS23595 f0da1133f1cf4e243ba0499eb36b531f 1227 Gene3D G3DSA:3.20.20.330 3 363 7.5E-129 T 09-03-2017 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 RG43_RS23595 f0da1133f1cf4e243ba0499eb36b531f 1227 Gene3D G3DSA:3.40.50.280 745 894 7.4E-66 T 09-03-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 RG43_RS23595 f0da1133f1cf4e243ba0499eb36b531f 1227 Gene3D G3DSA:3.20.20.20 364 636 6.5E-114 T 09-03-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RG43_RS23595 f0da1133f1cf4e243ba0499eb36b531f 1227 PIRSF PIRSF000381 1 1195 0.0 T 09-03-2017 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RG43_RS23595 f0da1133f1cf4e243ba0499eb36b531f 1227 Gene3D G3DSA:1.10.1240.10 650 737 1.8E-40 T 09-03-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RG43_RS23595 f0da1133f1cf4e243ba0499eb36b531f 1227 Gene3D G3DSA:3.10.196.10 957 1226 1.5E-115 T 09-03-2017 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RG43_RS23595 f0da1133f1cf4e243ba0499eb36b531f 1227 Pfam PF00809 Pterin binding enzyme 360 598 5.8E-62 T 09-03-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RG43_RS23595 f0da1133f1cf4e243ba0499eb36b531f 1227 TIGRFAM TIGR02082 metH: methionine synthase 12 1192 0.0 T 09-03-2017 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RG43_RS23595 f0da1133f1cf4e243ba0499eb36b531f 1227 SUPERFAMILY SSF52242 743 894 2.35E-48 T 09-03-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 RG43_RS23595 f0da1133f1cf4e243ba0499eb36b531f 1227 SMART SM01018 657 740 5.0E-45 T 09-03-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RG43_RS23595 f0da1133f1cf4e243ba0499eb36b531f 1227 SUPERFAMILY SSF56507 902 1226 7.46E-135 T 09-03-2017 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RG43_RS23595 f0da1133f1cf4e243ba0499eb36b531f 1227 Pfam PF02574 Homocysteine S-methyltransferase 17 325 5.0E-92 T 09-03-2017 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 RG43_RS23595 f0da1133f1cf4e243ba0499eb36b531f 1227 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 938 1208 1.4E-126 T 09-03-2017 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RG43_RS23595 f0da1133f1cf4e243ba0499eb36b531f 1227 SUPERFAMILY SSF51717 356 630 3.53E-88 T 09-03-2017 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RG43_RS23595 f0da1133f1cf4e243ba0499eb36b531f 1227 SUPERFAMILY SSF47644 652 739 4.05E-29 T 09-03-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RG43_RS23595 f0da1133f1cf4e243ba0499eb36b531f 1227 Pfam PF02310 B12 binding domain 748 840 3.0E-18 T 09-03-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 RG43_RS23595 f0da1133f1cf4e243ba0499eb36b531f 1227 Pfam PF02607 B12 binding domain 660 733 3.2E-25 T 09-03-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RG43_RS13855 8cd0afdf4a02d4527a397ca1fe1941fc 104 Gene3D G3DSA:3.40.250.10 23 96 3.7E-22 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS13855 8cd0afdf4a02d4527a397ca1fe1941fc 104 Pfam PF00581 Rhodanese-like domain 22 89 3.8E-12 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS13855 8cd0afdf4a02d4527a397ca1fe1941fc 104 SUPERFAMILY SSF52821 23 93 3.4E-19 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS13855 8cd0afdf4a02d4527a397ca1fe1941fc 104 TIGRFAM TIGR02981 phageshock_pspE: phage shock operon rhodanese PspE 3 103 1.1E-63 T 09-03-2017 IPR014323 Phage shock protein, PspE KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 RG43_RS13855 8cd0afdf4a02d4527a397ca1fe1941fc 104 SMART SM00450 7 103 1.7E-13 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS24685 626ce06e5782c5a112063f41a7a96964 457 Gene3D G3DSA:1.10.10.10 407 441 7.8E-4 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS24685 626ce06e5782c5a112063f41a7a96964 457 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 6 457 6.4E-243 T 09-03-2017 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22 RG43_RS24685 626ce06e5782c5a112063f41a7a96964 457 Pfam PF06969 HemN C-terminal domain 363 431 4.0E-8 T 09-03-2017 IPR010723 HemN, C-terminal RG43_RS24685 626ce06e5782c5a112063f41a7a96964 457 SUPERFAMILY SSF102114 6 444 2.75E-148 T 09-03-2017 RG43_RS24685 626ce06e5782c5a112063f41a7a96964 457 PIRSF PIRSF000167 3 454 3.1E-182 T 09-03-2017 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22 RG43_RS24685 626ce06e5782c5a112063f41a7a96964 457 Gene3D G3DSA:3.80.30.20 53 283 1.2E-32 T 09-03-2017 IPR023404 Radical SAM, alpha/beta horseshoe RG43_RS24685 626ce06e5782c5a112063f41a7a96964 457 Pfam PF04055 Radical SAM superfamily 57 226 5.0E-18 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 RG43_RS24685 626ce06e5782c5a112063f41a7a96964 457 SMART SM00729 52 272 1.3E-58 T 09-03-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RG43_RS03035 f2a48cf62f93cb72e86a7a3f4e4c92ad 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 1.3E-43 T 09-03-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS03035 f2a48cf62f93cb72e86a7a3f4e4c92ad 85 SUPERFAMILY SSF110324 2 81 5.58E-34 T 09-03-2017 RG43_RS03035 f2a48cf62f93cb72e86a7a3f4e4c92ad 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 1.0E-18 T 09-03-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS03035 f2a48cf62f93cb72e86a7a3f4e4c92ad 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 28.952 T 09-03-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS03035 f2a48cf62f93cb72e86a7a3f4e4c92ad 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.9E-38 T 09-03-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS03035 f2a48cf62f93cb72e86a7a3f4e4c92ad 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.9E-38 T 09-03-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS03035 f2a48cf62f93cb72e86a7a3f4e4c92ad 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.9E-38 T 09-03-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS03035 f2a48cf62f93cb72e86a7a3f4e4c92ad 85 Gene3D G3DSA:2.40.50.100 20 82 8.0E-32 T 09-03-2017 RG43_RS03035 f2a48cf62f93cb72e86a7a3f4e4c92ad 85 Pfam PF01016 Ribosomal L27 protein 2 82 6.3E-39 T 09-03-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS03035 f2a48cf62f93cb72e86a7a3f4e4c92ad 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 09-03-2017 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS06805 b77e95f7408b4d3844855d0467838691 139 PRINTS PR00421 Thioredoxin family signature 55 63 1.7E-9 T 09-03-2017 RG43_RS06805 b77e95f7408b4d3844855d0467838691 139 PRINTS PR00421 Thioredoxin family signature 103 114 1.7E-9 T 09-03-2017 RG43_RS06805 b77e95f7408b4d3844855d0467838691 139 PRINTS PR00421 Thioredoxin family signature 63 72 1.7E-9 T 09-03-2017 RG43_RS06805 b77e95f7408b4d3844855d0467838691 139 Gene3D G3DSA:3.40.30.10 31 138 1.4E-36 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS06805 b77e95f7408b4d3844855d0467838691 139 ProSitePatterns PS00194 Thioredoxin family active site. 56 74 - T 09-03-2017 IPR017937 Thioredoxin, conserved site GO:0045454 RG43_RS06805 b77e95f7408b4d3844855d0467838691 139 TIGRFAM TIGR01068 thioredoxin: thioredoxin 45 138 6.1E-37 T 09-03-2017 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RG43_RS06805 b77e95f7408b4d3844855d0467838691 139 Pfam PF00085 Thioredoxin 37 137 1.9E-28 T 09-03-2017 IPR013766 Thioredoxin domain GO:0045454 RG43_RS06805 b77e95f7408b4d3844855d0467838691 139 SUPERFAMILY SSF52833 25 137 9.23E-38 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS13690 c54de38890fe7098a4855ee0178ba51e 504 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 9 496 1.4E-121 T 09-03-2017 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 RG43_RS13690 c54de38890fe7098a4855ee0178ba51e 504 SUPERFAMILY SSF103473 477 500 6.54E-60 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS13690 c54de38890fe7098a4855ee0178ba51e 504 SUPERFAMILY SSF103473 4 189 6.54E-60 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS13690 c54de38890fe7098a4855ee0178ba51e 504 SUPERFAMILY SSF103473 246 417 6.54E-60 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS13690 c54de38890fe7098a4855ee0178ba51e 504 PRINTS PR01036 Tetracycline resistance protein TetB signature 12 36 9.8E-7 T 09-03-2017 RG43_RS13690 c54de38890fe7098a4855ee0178ba51e 504 PRINTS PR01036 Tetracycline resistance protein TetB signature 133 157 9.8E-7 T 09-03-2017 RG43_RS13690 c54de38890fe7098a4855ee0178ba51e 504 PRINTS PR01036 Tetracycline resistance protein TetB signature 103 123 9.8E-7 T 09-03-2017 RG43_RS13690 c54de38890fe7098a4855ee0178ba51e 504 PRINTS PR01036 Tetracycline resistance protein TetB signature 398 417 9.8E-7 T 09-03-2017 RG43_RS13690 c54de38890fe7098a4855ee0178ba51e 504 Pfam PF07690 Major Facilitator Superfamily 14 407 1.1E-40 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS13690 c54de38890fe7098a4855ee0178ba51e 504 Gene3D G3DSA:1.20.1250.20 261 423 3.3E-22 T 09-03-2017 RG43_RS13690 c54de38890fe7098a4855ee0178ba51e 504 Gene3D G3DSA:1.20.1250.20 482 502 3.3E-22 T 09-03-2017 RG43_RS13690 c54de38890fe7098a4855ee0178ba51e 504 Gene3D G3DSA:1.20.1250.20 6 182 6.9E-25 T 09-03-2017 RG43_RS08370 9605ed4c3cda8f087c1c3ba083eb409c 908 SUPERFAMILY SSF50692 814 891 1.06E-13 T 09-03-2017 IPR009010 Aspartate decarboxylase-like domain RG43_RS08370 9605ed4c3cda8f087c1c3ba083eb409c 908 SMART SM00926 221 275 7.0E-10 T 09-03-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08370 9605ed4c3cda8f087c1c3ba083eb409c 908 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 150 160 - T 09-03-2017 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08370 9605ed4c3cda8f087c1c3ba083eb409c 908 SUPERFAMILY SSF53706 219 688 4.71E-84 T 09-03-2017 RG43_RS08370 9605ed4c3cda8f087c1c3ba083eb409c 908 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 78 2.4E-11 T 09-03-2017 RG43_RS08370 9605ed4c3cda8f087c1c3ba083eb409c 908 Gene3D G3DSA:2.20.25.90 227 274 2.6E-14 T 09-03-2017 RG43_RS08370 9605ed4c3cda8f087c1c3ba083eb409c 908 Gene3D G3DSA:3.40.50.740 278 340 3.2E-36 T 09-03-2017 RG43_RS08370 9605ed4c3cda8f087c1c3ba083eb409c 908 Gene3D G3DSA:3.40.50.740 504 687 3.2E-36 T 09-03-2017 RG43_RS08370 9605ed4c3cda8f087c1c3ba083eb409c 908 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 88 124 8.3E-15 T 09-03-2017 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08370 9605ed4c3cda8f087c1c3ba083eb409c 908 Gene3D G3DSA:2.40.40.20 816 890 2.8E-12 T 09-03-2017 RG43_RS08370 9605ed4c3cda8f087c1c3ba083eb409c 908 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 09-03-2017 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08370 9605ed4c3cda8f087c1c3ba083eb409c 908 SUPERFAMILY SSF54292 1 77 1.09E-18 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RG43_RS08370 9605ed4c3cda8f087c1c3ba083eb409c 908 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 103 115 - T 09-03-2017 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08370 9605ed4c3cda8f087c1c3ba083eb409c 908 Pfam PF01568 Molydopterin dinucleotide binding domain 828 890 1.0E-6 T 09-03-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RG43_RS08370 9605ed4c3cda8f087c1c3ba083eb409c 908 Gene3D G3DSA:3.30.70.20 198 226 1.9E-4 T 09-03-2017 RG43_RS08370 9605ed4c3cda8f087c1c3ba083eb409c 908 Gene3D G3DSA:3.30.70.20 147 157 1.9E-4 T 09-03-2017 RG43_RS08370 9605ed4c3cda8f087c1c3ba083eb409c 908 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 221 274 9.4E-11 T 09-03-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08370 9605ed4c3cda8f087c1c3ba083eb409c 908 Gene3D G3DSA:3.10.20.30 3 84 9.3E-8 T 09-03-2017 IPR012675 Beta-grasp domain RG43_RS08370 9605ed4c3cda8f087c1c3ba083eb409c 908 Pfam PF00384 Molybdopterin oxidoreductase 562 638 8.6E-8 T 09-03-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08370 9605ed4c3cda8f087c1c3ba083eb409c 908 SUPERFAMILY SSF54862 81 213 2.93E-34 T 09-03-2017 RG43_RS08370 9605ed4c3cda8f087c1c3ba083eb409c 908 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 655 1.0E-205 T 09-03-2017 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08370 9605ed4c3cda8f087c1c3ba083eb409c 908 SMART SM00929 88 128 1.9E-19 T 09-03-2017 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08070 1291804346effeb83536a2d218a9105d 714 SUPERFAMILY SSF48179 615 706 2.3E-25 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RG43_RS08070 1291804346effeb83536a2d218a9105d 714 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 1 706 54.288 T 09-03-2017 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 RG43_RS08070 1291804346effeb83536a2d218a9105d 714 SUPERFAMILY SSF52096 7 299 9.96E-72 T 09-03-2017 IPR029045 ClpP/crotonase-like domain RG43_RS08070 1291804346effeb83536a2d218a9105d 714 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 489 513 - T 09-03-2017 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 RG43_RS08070 1291804346effeb83536a2d218a9105d 714 SUPERFAMILY SSF51735 308 489 1.53E-52 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS08070 1291804346effeb83536a2d218a9105d 714 SUPERFAMILY SSF48179 492 595 2.04E-28 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RG43_RS08070 1291804346effeb83536a2d218a9105d 714 Gene3D G3DSA:1.10.1040.10 624 709 5.3E-23 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RG43_RS08070 1291804346effeb83536a2d218a9105d 714 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 6 706 0.0 T 09-03-2017 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 RG43_RS08070 1291804346effeb83536a2d218a9105d 714 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 492 586 1.6E-28 T 09-03-2017 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 RG43_RS08070 1291804346effeb83536a2d218a9105d 714 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 618 704 3.7E-5 T 09-03-2017 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 RG43_RS08070 1291804346effeb83536a2d218a9105d 714 Gene3D G3DSA:1.10.1040.10 494 586 1.4E-29 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RG43_RS08070 1291804346effeb83536a2d218a9105d 714 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 311 489 7.1E-60 T 09-03-2017 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 RG43_RS08070 1291804346effeb83536a2d218a9105d 714 Gene3D G3DSA:3.90.226.10 3 204 8.9E-70 T 09-03-2017 IPR029045 ClpP/crotonase-like domain RG43_RS08070 1291804346effeb83536a2d218a9105d 714 Gene3D G3DSA:3.40.50.720 306 493 1.4E-55 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS08070 1291804346effeb83536a2d218a9105d 714 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 204 3.7E-44 T 09-03-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RG43_RS14435 8f80a9379e52023221a7cf06252eb4cc 216 Pfam PF00072 Response regulator receiver domain 9 120 8.2E-31 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS14435 8f80a9379e52023221a7cf06252eb4cc 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 170 197 - T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS14435 8f80a9379e52023221a7cf06252eb4cc 216 SMART SM00448 7 120 3.8E-37 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS14435 8f80a9379e52023221a7cf06252eb4cc 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 209 1.4E-22 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS14435 8f80a9379e52023221a7cf06252eb4cc 216 Gene3D G3DSA:1.10.10.10 155 214 1.2E-28 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS14435 8f80a9379e52023221a7cf06252eb4cc 216 SMART SM00421 153 210 1.0E-25 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS14435 8f80a9379e52023221a7cf06252eb4cc 216 SUPERFAMILY SSF46894 146 213 1.36E-20 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RG43_RS14435 8f80a9379e52023221a7cf06252eb4cc 216 SUPERFAMILY SSF52172 6 135 1.42E-36 T 09-03-2017 IPR011006 CheY-like superfamily RG43_RS14435 8f80a9379e52023221a7cf06252eb4cc 216 Gene3D G3DSA:3.40.50.2300 5 154 5.4E-41 T 09-03-2017 RG43_RS14435 8f80a9379e52023221a7cf06252eb4cc 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 1.1E-13 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS14435 8f80a9379e52023221a7cf06252eb4cc 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 1.1E-13 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS14435 8f80a9379e52023221a7cf06252eb4cc 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 1.1E-13 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS01985 d6d3bb4d3342c2656c491338bb1c4e7f 850 Gene3D G3DSA:2.40.50.140 347 421 1.2E-22 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS01985 d6d3bb4d3342c2656c491338bb1c4e7f 850 Gene3D G3DSA:1.10.3810.10 55 231 7.5E-76 T 09-03-2017 RG43_RS01985 d6d3bb4d3342c2656c491338bb1c4e7f 850 Pfam PF00912 Transglycosylase 55 229 5.6E-65 T 09-03-2017 IPR001264 Glycosyl transferase, family 51 RG43_RS01985 d6d3bb4d3342c2656c491338bb1c4e7f 850 Pfam PF00905 Penicillin binding protein transpeptidase domain 429 611 2.3E-24 T 09-03-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RG43_RS01985 d6d3bb4d3342c2656c491338bb1c4e7f 850 SUPERFAMILY SSF56601 422 610 4.3E-111 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like RG43_RS01985 d6d3bb4d3342c2656c491338bb1c4e7f 850 SUPERFAMILY SSF56601 211 233 4.3E-111 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like RG43_RS01985 d6d3bb4d3342c2656c491338bb1c4e7f 850 SUPERFAMILY SSF56601 672 832 4.3E-111 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like RG43_RS01985 d6d3bb4d3342c2656c491338bb1c4e7f 850 SUPERFAMILY SSF56601 262 313 4.3E-111 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like RG43_RS01985 d6d3bb4d3342c2656c491338bb1c4e7f 850 Pfam PF17092 Penicillin-binding protein OB-like domain 316 425 1.7E-31 T 09-03-2017 IPR031376 Penicillin-binding protein, OB-like domain RG43_RS01985 d6d3bb4d3342c2656c491338bb1c4e7f 850 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 758 1.1E-173 T 09-03-2017 RG43_RS01985 d6d3bb4d3342c2656c491338bb1c4e7f 850 Gene3D G3DSA:3.40.710.10 422 611 9.9E-132 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like RG43_RS01985 d6d3bb4d3342c2656c491338bb1c4e7f 850 Gene3D G3DSA:3.40.710.10 673 831 9.9E-132 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like RG43_RS01985 d6d3bb4d3342c2656c491338bb1c4e7f 850 Gene3D G3DSA:3.40.710.10 232 313 9.9E-132 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like RG43_RS01985 d6d3bb4d3342c2656c491338bb1c4e7f 850 SUPERFAMILY SSF53955 43 256 1.69E-80 T 09-03-2017 IPR023346 Lysozyme-like domain RG43_RS20890 18acf8210d82c9f9aedc74c99466b051 308 SMART SM00382 30 213 3.7E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS20890 18acf8210d82c9f9aedc74c99466b051 308 SUPERFAMILY SSF52540 3 232 2.77E-62 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS20890 18acf8210d82c9f9aedc74c99466b051 308 Gene3D G3DSA:3.40.50.300 2 228 3.8E-68 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS20890 18acf8210d82c9f9aedc74c99466b051 308 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS20890 18acf8210d82c9f9aedc74c99466b051 308 Pfam PF00005 ABC transporter 21 165 3.0E-31 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS17110 baf3958c7258b99cae3aeabe86008bb6 73 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 33 64 7.6E-9 T 09-03-2017 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 RG43_RS17110 baf3958c7258b99cae3aeabe86008bb6 73 SUPERFAMILY SSF57716 34 69 9.98E-6 T 09-03-2017 RG43_RS03120 bf16af9c81402c4ccf167b4d9487a2d0 890 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 887 17.63 T 09-03-2017 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 RG43_RS03120 bf16af9c81402c4ccf167b4d9487a2d0 890 SUPERFAMILY SSF50447 563 644 7.9E-23 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain RG43_RS03120 bf16af9c81402c4ccf167b4d9487a2d0 890 Gene3D G3DSA:3.40.50.10050 690 768 4.1E-24 T 09-03-2017 IPR023115 Translation initiation factor IF- 2, domain 3 RG43_RS03120 bf16af9c81402c4ccf167b4d9487a2d0 890 Pfam PF00009 Elongation factor Tu GTP binding domain 394 550 3.4E-35 T 09-03-2017 RG43_RS03120 bf16af9c81402c4ccf167b4d9487a2d0 890 SUPERFAMILY SSF46955 3 50 9.89E-12 T 09-03-2017 IPR009061 Putative DNA-binding domain RG43_RS03120 bf16af9c81402c4ccf167b4d9487a2d0 890 SUPERFAMILY SSF52156 667 796 3.53E-37 T 09-03-2017 IPR023115 Translation initiation factor IF- 2, domain 3 RG43_RS03120 bf16af9c81402c4ccf167b4d9487a2d0 890 Gene3D G3DSA:3.30.56.50 2 50 9.8E-23 T 09-03-2017 RG43_RS03120 bf16af9c81402c4ccf167b4d9487a2d0 890 SUPERFAMILY SSF50447 791 887 3.73E-34 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain RG43_RS03120 bf16af9c81402c4ccf167b4d9487a2d0 890 Gene3D G3DSA:3.40.50.300 389 549 6.4E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS03120 bf16af9c81402c4ccf167b4d9487a2d0 890 SUPERFAMILY SSF52540 389 557 4.21E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS03120 bf16af9c81402c4ccf167b4d9487a2d0 890 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 393 548 4.8E-33 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 RG43_RS03120 bf16af9c81402c4ccf167b4d9487a2d0 890 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 306 889 4.5E-298 T 09-03-2017 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 RG43_RS03120 bf16af9c81402c4ccf167b4d9487a2d0 890 Gene3D G3DSA:2.40.30.10 791 887 3.4E-39 T 09-03-2017 RG43_RS03120 bf16af9c81402c4ccf167b4d9487a2d0 890 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 314 364 6.9E-15 T 09-03-2017 IPR006847 Translation initiation factor IF-2, N-terminal RG43_RS03120 bf16af9c81402c4ccf167b4d9487a2d0 890 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 52 2.5E-7 T 09-03-2017 IPR006847 Translation initiation factor IF-2, N-terminal RG43_RS03120 bf16af9c81402c4ccf167b4d9487a2d0 890 Pfam PF11987 Translation-initiation factor 2 674 779 3.1E-36 T 09-03-2017 IPR023115 Translation initiation factor IF- 2, domain 3 RG43_RS03120 bf16af9c81402c4ccf167b4d9487a2d0 890 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 56 94 4.9E-16 T 09-03-2017 IPR013575 Initiation factor 2 associated domain, bacterial RG43_RS03120 bf16af9c81402c4ccf167b4d9487a2d0 890 ProSitePatterns PS01176 Initiation factor 2 signature. 840 862 - T 09-03-2017 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 RG43_RS03120 bf16af9c81402c4ccf167b4d9487a2d0 890 Gene3D G3DSA:2.40.30.10 563 653 5.7E-21 T 09-03-2017 RG43_RS00080 59d61cf0fd8b7ccc892925b12b90f905 774 Gene3D G3DSA:2.170.130.10 131 245 1.6E-31 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RG43_RS00080 59d61cf0fd8b7ccc892925b12b90f905 774 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 132 774 1.3E-165 T 09-03-2017 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 RG43_RS00080 59d61cf0fd8b7ccc892925b12b90f905 774 Pfam PF07715 TonB-dependent Receptor Plug Domain 132 244 3.2E-19 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RG43_RS00080 59d61cf0fd8b7ccc892925b12b90f905 774 Gene3D G3DSA:2.40.170.20 246 774 1.0E-120 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RG43_RS00080 59d61cf0fd8b7ccc892925b12b90f905 774 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 757 774 - T 09-03-2017 IPR010917 TonB-dependent receptor, conserved site RG43_RS00080 59d61cf0fd8b7ccc892925b12b90f905 774 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 63 - T 09-03-2017 IPR010916 TonB box, conserved site RG43_RS00080 59d61cf0fd8b7ccc892925b12b90f905 774 SUPERFAMILY SSF56935 117 774 3.23E-121 T 09-03-2017 RG43_RS00080 59d61cf0fd8b7ccc892925b12b90f905 774 Pfam PF07660 Secretin and TonB N terminus short domain 57 107 9.1E-10 T 09-03-2017 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 RG43_RS00080 59d61cf0fd8b7ccc892925b12b90f905 774 Pfam PF00593 TonB dependent receptor 525 771 6.5E-28 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RG43_RS00080 59d61cf0fd8b7ccc892925b12b90f905 774 SMART SM00965 56 107 1.6E-14 T 09-03-2017 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 RG43_RS07640 eee28c230b565de59322e7a02f56dcc3 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 4.0E-51 T 09-03-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 RG43_RS07640 eee28c230b565de59322e7a02f56dcc3 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 3.9E-49 T 09-03-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 RG43_RS07640 eee28c230b565de59322e7a02f56dcc3 169 Gene3D G3DSA:2.70.70.10 14 167 1.8E-60 T 09-03-2017 RG43_RS07640 eee28c230b565de59322e7a02f56dcc3 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 09-03-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 RG43_RS07640 eee28c230b565de59322e7a02f56dcc3 169 SUPERFAMILY SSF51261 12 167 4.36E-56 T 09-03-2017 IPR011055 Duplicated hybrid motif RG43_RS02930 f957fc3f45621e04f1c53152aea9a048 90 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 41 56 - T 09-03-2017 IPR002114 Phosphotransferase system, HPr serine phosphorylation site RG43_RS02930 f957fc3f45621e04f1c53152aea9a048 90 SUPERFAMILY SSF55594 4 90 3.66E-24 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like RG43_RS02930 f957fc3f45621e04f1c53152aea9a048 90 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 4 84 2.6E-22 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like RG43_RS02930 f957fc3f45621e04f1c53152aea9a048 90 PRINTS PR00107 Phosphocarrier protein signature 14 30 3.3E-8 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like RG43_RS02930 f957fc3f45621e04f1c53152aea9a048 90 PRINTS PR00107 Phosphocarrier protein signature 55 72 3.3E-8 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like RG43_RS02930 f957fc3f45621e04f1c53152aea9a048 90 PRINTS PR00107 Phosphocarrier protein signature 40 55 3.3E-8 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like RG43_RS02930 f957fc3f45621e04f1c53152aea9a048 90 Gene3D G3DSA:3.30.1340.10 3 89 1.6E-26 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like RG43_RS02930 f957fc3f45621e04f1c53152aea9a048 90 Pfam PF00381 PTS HPr component phosphorylation site 4 84 2.0E-22 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like RG43_RS02930 f957fc3f45621e04f1c53152aea9a048 90 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 09-03-2017 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site RG43_RS15115 211eeaac246f953b67ca2ccd0477fe3b 57 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 55 16.352 T 09-03-2017 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS15115 211eeaac246f953b67ca2ccd0477fe3b 57 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 1.2E-18 T 09-03-2017 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS15115 211eeaac246f953b67ca2ccd0477fe3b 57 Pfam PF01783 Ribosomal L32p protein family 2 57 1.9E-19 T 09-03-2017 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS15115 211eeaac246f953b67ca2ccd0477fe3b 57 SUPERFAMILY SSF57829 2 55 1.53E-18 T 09-03-2017 IPR011332 Zinc-binding ribosomal protein GO:0006412 RG43_RS12155 9fbd7e45b112c0669de5a6d3732b46a6 303 SUPERFAMILY SSF46689 232 284 2.55E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS12155 9fbd7e45b112c0669de5a6d3732b46a6 303 SUPERFAMILY SSF51182 21 94 7.12E-10 T 09-03-2017 IPR011051 RmlC-like cupin domain RG43_RS12155 9fbd7e45b112c0669de5a6d3732b46a6 303 Gene3D G3DSA:2.60.120.10 30 89 4.2E-9 T 09-03-2017 IPR014710 RmlC-like jelly roll fold RG43_RS12155 9fbd7e45b112c0669de5a6d3732b46a6 303 Gene3D G3DSA:1.10.10.60 233 283 5.3E-16 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS12155 9fbd7e45b112c0669de5a6d3732b46a6 303 SUPERFAMILY SSF46689 179 230 3.9E-5 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS12155 9fbd7e45b112c0669de5a6d3732b46a6 303 Gene3D G3DSA:1.10.10.60 181 232 2.7E-11 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS12155 9fbd7e45b112c0669de5a6d3732b46a6 303 Pfam PF02311 AraC-like ligand binding domain 27 157 4.6E-12 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RG43_RS12155 9fbd7e45b112c0669de5a6d3732b46a6 303 SMART SM00342 196 279 1.2E-27 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS12155 9fbd7e45b112c0669de5a6d3732b46a6 303 Pfam PF12833 Helix-turn-helix domain 202 281 1.7E-18 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS12120 8d98038c6dec8415d1e126fe011fc089 792 Gene3D G3DSA:3.30.1490.20 8 197 2.3E-69 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RG43_RS12120 8d98038c6dec8415d1e126fe011fc089 792 SUPERFAMILY SSF56059 7 386 7.89E-110 T 09-03-2017 RG43_RS12120 8d98038c6dec8415d1e126fe011fc089 792 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 416 427 - T 09-03-2017 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 RG43_RS12120 8d98038c6dec8415d1e126fe011fc089 792 Gene3D G3DSA:3.30.470.20 199 357 1.3E-61 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RG43_RS12120 8d98038c6dec8415d1e126fe011fc089 792 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 22 350 6.4E-122 T 09-03-2017 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 RG43_RS12120 8d98038c6dec8415d1e126fe011fc089 792 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 9 792 0.0 T 09-03-2017 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 RG43_RS12120 8d98038c6dec8415d1e126fe011fc089 792 PIRSF PIRSF000854 4 792 0.0 T 09-03-2017 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 RG43_RS12120 8d98038c6dec8415d1e126fe011fc089 792 Gene3D G3DSA:3.20.20.60 484 791 7.6E-103 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RG43_RS12120 8d98038c6dec8415d1e126fe011fc089 792 SUPERFAMILY SSF51621 467 790 7.59E-96 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RG43_RS12120 8d98038c6dec8415d1e126fe011fc089 792 SUPERFAMILY SSF52009 350 468 2.22E-35 T 09-03-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RG43_RS12120 8d98038c6dec8415d1e126fe011fc089 792 Gene3D G3DSA:3.50.30.10 376 473 1.0E-36 T 09-03-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RG43_RS12120 8d98038c6dec8415d1e126fe011fc089 792 Pfam PF00391 PEP-utilising enzyme, mobile domain 386 457 7.5E-27 T 09-03-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RG43_RS12120 8d98038c6dec8415d1e126fe011fc089 792 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 696 714 - T 09-03-2017 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 RG43_RS12120 8d98038c6dec8415d1e126fe011fc089 792 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 482 789 1.0E-59 T 09-03-2017 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 RG43_RS03575 12345849cd7ae151e220712ad72747ab 1030 Gene3D G3DSA:2.60.40.320 196 318 4.1E-34 T 09-03-2017 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 RG43_RS03575 12345849cd7ae151e220712ad72747ab 1030 SUPERFAMILY SSF49785 1 205 7.23E-61 T 09-03-2017 IPR008979 Galactose-binding domain-like RG43_RS03575 12345849cd7ae151e220712ad72747ab 1030 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 320 604 8.9E-120 T 09-03-2017 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 RG43_RS03575 12345849cd7ae151e220712ad72747ab 1030 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 44 204 1.1E-46 T 09-03-2017 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 RG43_RS03575 12345849cd7ae151e220712ad72747ab 1030 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 435 449 - T 09-03-2017 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 RG43_RS03575 12345849cd7ae151e220712ad72747ab 1030 SUPERFAMILY SSF51445 320 598 1.01E-82 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily RG43_RS03575 12345849cd7ae151e220712ad72747ab 1030 PRINTS PR00132 Glycosyl hydrolase family 2 signature 360 378 1.2E-32 T 09-03-2017 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 RG43_RS03575 12345849cd7ae151e220712ad72747ab 1030 PRINTS PR00132 Glycosyl hydrolase family 2 signature 329 343 1.2E-32 T 09-03-2017 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 RG43_RS03575 12345849cd7ae151e220712ad72747ab 1030 PRINTS PR00132 Glycosyl hydrolase family 2 signature 435 450 1.2E-32 T 09-03-2017 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 RG43_RS03575 12345849cd7ae151e220712ad72747ab 1030 PRINTS PR00132 Glycosyl hydrolase family 2 signature 135 150 1.2E-32 T 09-03-2017 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 RG43_RS03575 12345849cd7ae151e220712ad72747ab 1030 PRINTS PR00132 Glycosyl hydrolase family 2 signature 506 521 1.2E-32 T 09-03-2017 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 RG43_RS03575 12345849cd7ae151e220712ad72747ab 1030 SUPERFAMILY SSF74650 714 1000 7.53E-85 T 09-03-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 RG43_RS03575 12345849cd7ae151e220712ad72747ab 1030 Gene3D G3DSA:3.20.20.80 320 598 6.4E-91 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RG43_RS03575 12345849cd7ae151e220712ad72747ab 1030 SMART SM01038 727 998 1.6E-124 T 09-03-2017 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 RG43_RS03575 12345849cd7ae151e220712ad72747ab 1030 Gene3D G3DSA:2.60.120.260 2 195 2.1E-72 T 09-03-2017 IPR008979 Galactose-binding domain-like RG43_RS03575 12345849cd7ae151e220712ad72747ab 1030 Pfam PF02929 Beta galactosidase small chain 730 997 1.2E-64 T 09-03-2017 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 RG43_RS03575 12345849cd7ae151e220712ad72747ab 1030 SUPERFAMILY SSF49303 209 318 2.13E-24 T 09-03-2017 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 RG43_RS03575 12345849cd7ae151e220712ad72747ab 1030 Gene3D G3DSA:2.70.98.10 714 1000 2.1E-87 T 09-03-2017 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 RG43_RS03575 12345849cd7ae151e220712ad72747ab 1030 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 370 395 - T 09-03-2017 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 RG43_RS03575 12345849cd7ae151e220712ad72747ab 1030 Pfam PF00703 Glycosyl hydrolases family 2 209 318 3.8E-19 T 09-03-2017 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 RG43_RS03575 12345849cd7ae151e220712ad72747ab 1030 SUPERFAMILY SSF49303 606 704 1.01E-23 T 09-03-2017 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 RG43_RS03575 12345849cd7ae151e220712ad72747ab 1030 Gene3D G3DSA:2.60.40.320 601 701 1.5E-30 T 09-03-2017 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 RG43_RS03575 12345849cd7ae151e220712ad72747ab 1030 Pfam PF16353 Domain of unknown function(DUF4981) 614 700 3.0E-17 T 09-03-2017 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 RG43_RS20640 75b8e7871c67938515ee3f14a5c26b15 185 Pfam PF01765 Ribosome recycling factor 20 183 6.8E-63 T 09-03-2017 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 RG43_RS20640 75b8e7871c67938515ee3f14a5c26b15 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.437 T 09-03-2017 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 RG43_RS20640 75b8e7871c67938515ee3f14a5c26b15 185 SUPERFAMILY SSF55194 2 184 2.09E-71 T 09-03-2017 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 RG43_RS20640 75b8e7871c67938515ee3f14a5c26b15 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 185 1.0E-81 T 09-03-2017 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 RG43_RS20640 75b8e7871c67938515ee3f14a5c26b15 185 Gene3D G3DSA:1.10.132.20 67 184 2.9E-44 T 09-03-2017 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 RG43_RS23170 44506bc59fb44b5641edf8cd9ac849d1 231 Pfam PF00834 Ribulose-phosphate 3 epimerase family 2 196 6.7E-63 T 09-03-2017 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RG43_RS23170 44506bc59fb44b5641edf8cd9ac849d1 231 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 29 43 - T 09-03-2017 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RG43_RS23170 44506bc59fb44b5641edf8cd9ac849d1 231 Gene3D G3DSA:3.20.20.70 1 223 1.8E-78 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS23170 44506bc59fb44b5641edf8cd9ac849d1 231 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 132 154 - T 09-03-2017 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RG43_RS23170 44506bc59fb44b5641edf8cd9ac849d1 231 SUPERFAMILY SSF51366 1 214 4.15E-59 T 09-03-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RG43_RS23170 44506bc59fb44b5641edf8cd9ac849d1 231 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 2 207 2.0E-65 T 09-03-2017 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RG43_RS04895 7fb10c7025e04c7b20afcc2eb05b3448 418 Gene3D G3DSA:1.20.1250.20 6 121 1.2E-7 T 09-03-2017 RG43_RS04895 7fb10c7025e04c7b20afcc2eb05b3448 418 Gene3D G3DSA:1.20.1250.20 200 405 1.7E-18 T 09-03-2017 RG43_RS04895 7fb10c7025e04c7b20afcc2eb05b3448 418 Pfam PF03825 Nucleoside H+ symporter 1 406 1.3E-188 T 09-03-2017 RG43_RS04895 7fb10c7025e04c7b20afcc2eb05b3448 418 Hamap MF_02049 Nucleoside permease NupG [nupG]. 1 417 47.475 T 09-03-2017 IPR033667 Nucleoside permease NupG GO:0005887|GO:1901642 RG43_RS04895 7fb10c7025e04c7b20afcc2eb05b3448 418 SUPERFAMILY SSF103473 9 406 4.05E-32 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS04895 7fb10c7025e04c7b20afcc2eb05b3448 418 TIGRFAM TIGR00889 2A0110: nucleoside transporter 1 418 2.0E-225 T 09-03-2017 IPR004740 Nucleoside:H+ symporter GO:0005337|GO:0015858|GO:0016021 RG43_RS23390 b74f37535e1cc642f59ed9269dd27fc0 327 SUPERFAMILY SSF50129 5 142 2.83E-33 T 09-03-2017 IPR011032 GroES-like RG43_RS23390 b74f37535e1cc642f59ed9269dd27fc0 327 Gene3D G3DSA:3.90.180.10 5 146 2.5E-43 T 09-03-2017 IPR011032 GroES-like RG43_RS23390 b74f37535e1cc642f59ed9269dd27fc0 327 Pfam PF00107 Zinc-binding dehydrogenase 152 258 3.8E-29 T 09-03-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RG43_RS23390 b74f37535e1cc642f59ed9269dd27fc0 327 SMART SM00829 11 325 2.0E-26 T 09-03-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RG43_RS23390 b74f37535e1cc642f59ed9269dd27fc0 327 SUPERFAMILY SSF51735 113 275 5.24E-47 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS23390 b74f37535e1cc642f59ed9269dd27fc0 327 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 141 162 - T 09-03-2017 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 RG43_RS23390 b74f37535e1cc642f59ed9269dd27fc0 327 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 88 1.8E-9 T 09-03-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RG43_RS23390 b74f37535e1cc642f59ed9269dd27fc0 327 Gene3D G3DSA:3.40.50.720 147 256 5.1E-27 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS03145 25f3a0cfa5f9a65077341c4f6e809d63 734 SUPERFAMILY SSF46915 249 348 1.2E-25 T 09-03-2017 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RG43_RS03145 25f3a0cfa5f9a65077341c4f6e809d63 734 Pfam PF00575 S1 RNA binding domain 642 713 6.1E-23 T 09-03-2017 IPR003029 S1 domain GO:0003676 RG43_RS03145 25f3a0cfa5f9a65077341c4f6e809d63 734 SUPERFAMILY SSF50249 631 716 9.42E-23 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS03145 25f3a0cfa5f9a65077341c4f6e809d63 734 SUPERFAMILY SSF54791 577 645 1.37E-17 T 09-03-2017 IPR004088 K Homology domain, type 1 GO:0003723 RG43_RS03145 25f3a0cfa5f9a65077341c4f6e809d63 734 Pfam PF01138 3' exoribonuclease family, domain 1 39 167 9.6E-19 T 09-03-2017 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 RG43_RS03145 25f3a0cfa5f9a65077341c4f6e809d63 734 Pfam PF01138 3' exoribonuclease family, domain 1 347 479 8.1E-21 T 09-03-2017 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 RG43_RS03145 25f3a0cfa5f9a65077341c4f6e809d63 734 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 26 716 30.614 T 09-03-2017 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RG43_RS03145 25f3a0cfa5f9a65077341c4f6e809d63 734 PIRSF PIRSF005499 25 733 4.1E-302 T 09-03-2017 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RG43_RS03145 25f3a0cfa5f9a65077341c4f6e809d63 734 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 33 714 0.0 T 09-03-2017 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RG43_RS03145 25f3a0cfa5f9a65077341c4f6e809d63 734 Pfam PF00013 KH domain 580 637 4.8E-9 T 09-03-2017 IPR004088 K Homology domain, type 1 GO:0003723 RG43_RS03145 25f3a0cfa5f9a65077341c4f6e809d63 734 Pfam PF03725 3' exoribonuclease family, domain 2 170 233 2.9E-14 T 09-03-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 RG43_RS03145 25f3a0cfa5f9a65077341c4f6e809d63 734 Pfam PF03725 3' exoribonuclease family, domain 2 483 550 1.7E-4 T 09-03-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 RG43_RS03145 25f3a0cfa5f9a65077341c4f6e809d63 734 SUPERFAMILY SSF55666 168 258 2.1E-31 T 09-03-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 RG43_RS03145 25f3a0cfa5f9a65077341c4f6e809d63 734 Gene3D G3DSA:2.40.50.140 642 717 1.3E-27 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS03145 25f3a0cfa5f9a65077341c4f6e809d63 734 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 264 343 4.2E-26 T 09-03-2017 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RG43_RS03145 25f3a0cfa5f9a65077341c4f6e809d63 734 Gene3D G3DSA:3.30.230.70 23 248 1.1E-84 T 09-03-2017 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 RG43_RS03145 25f3a0cfa5f9a65077341c4f6e809d63 734 Gene3D G3DSA:3.30.230.70 337 565 5.6E-88 T 09-03-2017 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 RG43_RS03145 25f3a0cfa5f9a65077341c4f6e809d63 734 SMART SM00322 575 640 1.2E-12 T 09-03-2017 IPR004087 K Homology domain GO:0003676 RG43_RS03145 25f3a0cfa5f9a65077341c4f6e809d63 734 SUPERFAMILY SSF54211 21 167 1.06E-50 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold RG43_RS03145 25f3a0cfa5f9a65077341c4f6e809d63 734 SUPERFAMILY SSF54211 324 515 2.89E-46 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold RG43_RS03145 25f3a0cfa5f9a65077341c4f6e809d63 734 SUPERFAMILY SSF55666 473 571 1.82E-27 T 09-03-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 RG43_RS03145 25f3a0cfa5f9a65077341c4f6e809d63 734 Gene3D G3DSA:1.10.10.400 249 336 1.2E-25 T 09-03-2017 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RG43_RS03145 25f3a0cfa5f9a65077341c4f6e809d63 734 SMART SM00316 643 713 1.6E-27 T 09-03-2017 IPR022967 RNA-binding domain, S1 RG43_RS03145 25f3a0cfa5f9a65077341c4f6e809d63 734 Gene3D G3DSA:3.30.1370.10 575 641 1.1E-26 T 09-03-2017 IPR004088 K Homology domain, type 1 GO:0003723 RG43_RS03720 81c51bdfb5c61bdf21091bd5f57395e1 247 Pfam PF08483 IstB-like ATP binding N-terminal 23 51 1.6E-8 T 09-03-2017 IPR013690 IstB-like ATP binding N-terminal RG43_RS03720 81c51bdfb5c61bdf21091bd5f57395e1 247 Gene3D G3DSA:3.40.50.300 53 228 6.8E-27 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS03720 81c51bdfb5c61bdf21091bd5f57395e1 247 SMART SM00382 97 230 0.0028 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS03720 81c51bdfb5c61bdf21091bd5f57395e1 247 Pfam PF01695 IstB-like ATP binding protein 53 228 1.3E-57 T 09-03-2017 IPR002611 IstB-like ATP-binding protein GO:0005524 RG43_RS03720 81c51bdfb5c61bdf21091bd5f57395e1 247 PIRSF PIRSF003073 1 245 4.3E-68 T 09-03-2017 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein RG43_RS03720 81c51bdfb5c61bdf21091bd5f57395e1 247 SUPERFAMILY SSF52540 68 240 7.38E-26 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS11095 5178eaa386ae88dab8a31b3a0a4debed 577 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 7.2E-22 T 09-03-2017 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 RG43_RS11095 5178eaa386ae88dab8a31b3a0a4debed 577 SUPERFAMILY SSF47323 454 577 3.34E-35 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS11095 5178eaa386ae88dab8a31b3a0a4debed 577 SUPERFAMILY SSF52374 110 454 5.0E-99 T 09-03-2017 RG43_RS11095 5178eaa386ae88dab8a31b3a0a4debed 577 Gene3D G3DSA:3.40.50.620 111 453 2.3E-119 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS11095 5178eaa386ae88dab8a31b3a0a4debed 577 SMART SM01016 5 87 7.8E-29 T 09-03-2017 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 RG43_RS11095 5178eaa386ae88dab8a31b3a0a4debed 577 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 577 1.4E-219 T 09-03-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 RG43_RS11095 5178eaa386ae88dab8a31b3a0a4debed 577 Gene3D G3DSA:3.30.1360.70 2 105 3.6E-35 T 09-03-2017 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 RG43_RS11095 5178eaa386ae88dab8a31b3a0a4debed 577 Pfam PF00750 tRNA synthetases class I (R) 95 446 1.1E-179 T 09-03-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 RG43_RS11095 5178eaa386ae88dab8a31b3a0a4debed 577 SUPERFAMILY SSF55190 2 100 1.83E-23 T 09-03-2017 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 RG43_RS11095 5178eaa386ae88dab8a31b3a0a4debed 577 Gene3D G3DSA:1.10.730.10 454 577 5.2E-36 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS11095 5178eaa386ae88dab8a31b3a0a4debed 577 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 577 29.648 T 09-03-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 RG43_RS11095 5178eaa386ae88dab8a31b3a0a4debed 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 9.0E-26 T 09-03-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 RG43_RS11095 5178eaa386ae88dab8a31b3a0a4debed 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 9.0E-26 T 09-03-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 RG43_RS11095 5178eaa386ae88dab8a31b3a0a4debed 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 9.0E-26 T 09-03-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 RG43_RS11095 5178eaa386ae88dab8a31b3a0a4debed 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 303 324 9.0E-26 T 09-03-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 RG43_RS11095 5178eaa386ae88dab8a31b3a0a4debed 577 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 09-03-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS11095 5178eaa386ae88dab8a31b3a0a4debed 577 Pfam PF05746 DALR anticodon binding domain 460 577 2.6E-35 T 09-03-2017 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 RG43_RS11095 5178eaa386ae88dab8a31b3a0a4debed 577 SMART SM00836 460 577 1.4E-36 T 09-03-2017 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 RG43_RS17880 5b1d4e45bb80d6e0c2b893a43498207d 213 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 3 213 30.093 T 09-03-2017 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: R-HSA-196807 RG43_RS17880 5b1d4e45bb80d6e0c2b893a43498207d 213 Gene3D G3DSA:3.40.50.620 6 213 9.1E-67 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS17880 5b1d4e45bb80d6e0c2b893a43498207d 213 SUPERFAMILY SSF52374 3 213 1.91E-59 T 09-03-2017 RG43_RS17880 5b1d4e45bb80d6e0c2b893a43498207d 213 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 6 68 7.3E-13 T 09-03-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RG43_RS17880 5b1d4e45bb80d6e0c2b893a43498207d 213 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 7 212 2.2E-63 T 09-03-2017 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: R-HSA-196807 RG43_RS17880 5b1d4e45bb80d6e0c2b893a43498207d 213 Pfam PF01467 Cytidylyltransferase-like 7 187 2.0E-37 T 09-03-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RG43_RS06455 29920038b47c3570580a45919f232718 512 Gene3D G3DSA:1.20.1250.20 16 199 4.0E-32 T 09-03-2017 RG43_RS06455 29920038b47c3570580a45919f232718 512 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 13 498 4.8E-220 T 09-03-2017 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 RG43_RS06455 29920038b47c3570580a45919f232718 512 Pfam PF07690 Major Facilitator Superfamily 19 413 1.5E-53 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS06455 29920038b47c3570580a45919f232718 512 Gene3D G3DSA:1.20.1250.20 476 501 1.1E-22 T 09-03-2017 RG43_RS06455 29920038b47c3570580a45919f232718 512 Gene3D G3DSA:1.20.1250.20 266 424 1.1E-22 T 09-03-2017 RG43_RS06455 29920038b47c3570580a45919f232718 512 SUPERFAMILY SSF103473 475 500 4.71E-71 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS06455 29920038b47c3570580a45919f232718 512 SUPERFAMILY SSF103473 9 196 4.71E-71 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS06455 29920038b47c3570580a45919f232718 512 SUPERFAMILY SSF103473 251 423 4.71E-71 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS08355 65b3b65a9257fab55761063ad7f26e6d 600 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 50 178 6.6E-40 T 09-03-2017 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08355 65b3b65a9257fab55761063ad7f26e6d 600 SUPERFAMILY SSF56762 225 600 1.3E-118 T 09-03-2017 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08355 65b3b65a9257fab55761063ad7f26e6d 600 Gene3D G3DSA:1.10.645.10 216 585 6.6E-46 T 09-03-2017 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08355 65b3b65a9257fab55761063ad7f26e6d 600 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 138 159 - T 09-03-2017 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08355 65b3b65a9257fab55761063ad7f26e6d 600 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 25 185 25.255 T 09-03-2017 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08355 65b3b65a9257fab55761063ad7f26e6d 600 Hamap MF_01359 NADH-quinone oxidoreductase subunit C/D [nuoC]. 16 600 72.498 T 09-03-2017 IPR023062 NADH dehydrogenase, subunit CD GO:0030964|GO:0050136|GO:0055114 KEGG: 00190+1.6.5.11 RG43_RS08355 65b3b65a9257fab55761063ad7f26e6d 600 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 105 160 1.0E-26 T 09-03-2017 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08355 65b3b65a9257fab55761063ad7f26e6d 600 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 211 600 41.862 T 09-03-2017 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08355 65b3b65a9257fab55761063ad7f26e6d 600 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 49 176 4.0E-45 T 09-03-2017 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08355 65b3b65a9257fab55761063ad7f26e6d 600 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 252 263 - T 09-03-2017 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08355 65b3b65a9257fab55761063ad7f26e6d 600 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 215 600 6.1E-178 T 09-03-2017 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08355 65b3b65a9257fab55761063ad7f26e6d 600 SUPERFAMILY SSF143243 25 229 1.24E-58 T 09-03-2017 RG43_RS08355 65b3b65a9257fab55761063ad7f26e6d 600 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 329 600 8.2E-102 T 09-03-2017 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS10100 c1ff602f4e50b69272d65ca50059a131 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 1.5E-12 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS10100 c1ff602f4e50b69272d65ca50059a131 316 SUPERFAMILY SSF46785 11 112 1.55E-13 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS10100 c1ff602f4e50b69272d65ca50059a131 316 Pfam PF03466 LysR substrate binding domain 90 293 3.3E-41 T 09-03-2017 IPR005119 LysR, substrate-binding RG43_RS10100 c1ff602f4e50b69272d65ca50059a131 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.9E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS10100 c1ff602f4e50b69272d65ca50059a131 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.9E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS10100 c1ff602f4e50b69272d65ca50059a131 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.9E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS10100 c1ff602f4e50b69272d65ca50059a131 316 Gene3D G3DSA:3.40.190.10 180 260 5.7E-21 T 09-03-2017 RG43_RS10100 c1ff602f4e50b69272d65ca50059a131 316 SUPERFAMILY SSF53850 88 294 4.98E-42 T 09-03-2017 RG43_RS10100 c1ff602f4e50b69272d65ca50059a131 316 Gene3D G3DSA:3.40.190.10 92 179 2.0E-21 T 09-03-2017 RG43_RS10100 c1ff602f4e50b69272d65ca50059a131 316 Gene3D G3DSA:1.10.10.10 2 81 1.3E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS00825 f7ed0169cb222a34a20fd20abaea8240 231 SMART SM01007 7 198 5.4E-65 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal RG43_RS00825 f7ed0169cb222a34a20fd20abaea8240 231 Gene3D G3DSA:3.40.225.10 2 231 1.1E-72 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal RG43_RS00825 f7ed0169cb222a34a20fd20abaea8240 231 TIGRFAM TIGR00760 araD: L-ribulose-5-phosphate 4-epimerase 1 231 1.3E-133 T 09-03-2017 IPR004661 L-ribulose-5-phosphate 4-epimerase GO:0008270|GO:0008742|GO:0019572 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 RG43_RS00825 f7ed0169cb222a34a20fd20abaea8240 231 SUPERFAMILY SSF53639 1 223 9.61E-69 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal RG43_RS00825 f7ed0169cb222a34a20fd20abaea8240 231 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 196 5.9E-47 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal RG43_RS21815 520922c31670b3443035f75d378495d3 304 Pfam PF07729 FCD domain 159 286 2.8E-9 T 09-03-2017 IPR011711 GntR, C-terminal RG43_RS21815 520922c31670b3443035f75d378495d3 304 Gene3D G3DSA:1.20.120.530 154 299 1.1E-14 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal RG43_RS21815 520922c31670b3443035f75d378495d3 304 SMART SM00895 159 287 2.7E-10 T 09-03-2017 IPR011711 GntR, C-terminal RG43_RS21815 520922c31670b3443035f75d378495d3 304 Gene3D G3DSA:1.10.10.10 2 69 3.0E-11 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS21815 520922c31670b3443035f75d378495d3 304 Pfam PF00392 Bacterial regulatory proteins, gntR family 26 59 7.9E-6 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS21815 520922c31670b3443035f75d378495d3 304 SUPERFAMILY SSF48008 157 294 2.01E-12 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal RG43_RS21815 520922c31670b3443035f75d378495d3 304 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 2.5E-6 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS21815 520922c31670b3443035f75d378495d3 304 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 2.5E-6 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS21815 520922c31670b3443035f75d378495d3 304 Gene3D G3DSA:1.10.10.10 94 146 8.1E-5 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS21815 520922c31670b3443035f75d378495d3 304 SUPERFAMILY SSF46785 3 72 9.1E-9 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS26205 34c5c7b28a7996541eb80ea0040056e7 581 PIRSF PIRSF002811 2 580 2.1E-146 T 09-03-2017 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 RG43_RS26205 34c5c7b28a7996541eb80ea0040056e7 581 Gene3D G3DSA:1.20.50.20 368 426 2.0E-28 T 09-03-2017 RG43_RS26205 34c5c7b28a7996541eb80ea0040056e7 581 Pfam PF01807 CHC2 zinc finger 7 100 5.3E-41 T 09-03-2017 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 RG43_RS26205 34c5c7b28a7996541eb80ea0040056e7 581 SUPERFAMILY SSF56731 115 428 2.35E-116 T 09-03-2017 RG43_RS26205 34c5c7b28a7996541eb80ea0040056e7 581 TIGRFAM TIGR01391 dnaG: DNA primase 4 419 5.2E-152 T 09-03-2017 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 RG43_RS26205 34c5c7b28a7996541eb80ea0040056e7 581 Pfam PF08275 DNA primase catalytic core, N-terminal domain 126 251 1.1E-43 T 09-03-2017 IPR013264 DNA primase, catalytic core, N-terminal RG43_RS26205 34c5c7b28a7996541eb80ea0040056e7 581 Gene3D G3DSA:3.90.980.10 116 240 2.6E-47 T 09-03-2017 IPR013264 DNA primase, catalytic core, N-terminal RG43_RS26205 34c5c7b28a7996541eb80ea0040056e7 581 Gene3D G3DSA:3.40.1360.10 241 367 1.1E-48 T 09-03-2017 RG43_RS26205 34c5c7b28a7996541eb80ea0040056e7 581 Pfam PF08278 DNA primase DnaG DnaB-binding 451 574 2.7E-33 T 09-03-2017 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 RG43_RS26205 34c5c7b28a7996541eb80ea0040056e7 581 Gene3D G3DSA:3.90.580.10 1 100 1.5E-40 T 09-03-2017 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 RG43_RS26205 34c5c7b28a7996541eb80ea0040056e7 581 SMART SM00766 450 575 1.4E-48 T 09-03-2017 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 RG43_RS26205 34c5c7b28a7996541eb80ea0040056e7 581 SUPERFAMILY SSF117023 447 579 3.01E-43 T 09-03-2017 RG43_RS26205 34c5c7b28a7996541eb80ea0040056e7 581 SMART SM00493 259 330 2.3E-21 T 09-03-2017 IPR006171 Toprim domain RG43_RS26205 34c5c7b28a7996541eb80ea0040056e7 581 Gene3D G3DSA:1.10.860.10 437 580 4.5E-55 T 09-03-2017 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal RG43_RS26205 34c5c7b28a7996541eb80ea0040056e7 581 SUPERFAMILY SSF57783 4 100 8.67E-36 T 09-03-2017 RG43_RS26205 34c5c7b28a7996541eb80ea0040056e7 581 Pfam PF10410 DnaB-helicase binding domain of primase 369 424 8.3E-13 T 09-03-2017 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 RG43_RS26205 34c5c7b28a7996541eb80ea0040056e7 581 Hamap MF_00974 DNA primase [dnaG]. 4 576 30.621 T 09-03-2017 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 RG43_RS26205 34c5c7b28a7996541eb80ea0040056e7 581 SMART SM00400 36 90 7.6E-38 T 09-03-2017 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 RG43_RS26205 34c5c7b28a7996541eb80ea0040056e7 581 Pfam PF13155 Toprim-like 263 348 4.0E-15 T 09-03-2017 RG43_RS03830 34c5c7b28a7996541eb80ea0040056e7 581 PIRSF PIRSF002811 2 580 2.1E-146 T 09-03-2017 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 RG43_RS03830 34c5c7b28a7996541eb80ea0040056e7 581 Gene3D G3DSA:1.20.50.20 368 426 2.0E-28 T 09-03-2017 RG43_RS03830 34c5c7b28a7996541eb80ea0040056e7 581 Pfam PF01807 CHC2 zinc finger 7 100 5.3E-41 T 09-03-2017 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 RG43_RS03830 34c5c7b28a7996541eb80ea0040056e7 581 SUPERFAMILY SSF56731 115 428 2.35E-116 T 09-03-2017 RG43_RS03830 34c5c7b28a7996541eb80ea0040056e7 581 TIGRFAM TIGR01391 dnaG: DNA primase 4 419 5.2E-152 T 09-03-2017 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 RG43_RS03830 34c5c7b28a7996541eb80ea0040056e7 581 Pfam PF08275 DNA primase catalytic core, N-terminal domain 126 251 1.1E-43 T 09-03-2017 IPR013264 DNA primase, catalytic core, N-terminal RG43_RS03830 34c5c7b28a7996541eb80ea0040056e7 581 Gene3D G3DSA:3.90.980.10 116 240 2.6E-47 T 09-03-2017 IPR013264 DNA primase, catalytic core, N-terminal RG43_RS03830 34c5c7b28a7996541eb80ea0040056e7 581 Gene3D G3DSA:3.40.1360.10 241 367 1.1E-48 T 09-03-2017 RG43_RS03830 34c5c7b28a7996541eb80ea0040056e7 581 Pfam PF08278 DNA primase DnaG DnaB-binding 451 574 2.7E-33 T 09-03-2017 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 RG43_RS03830 34c5c7b28a7996541eb80ea0040056e7 581 Gene3D G3DSA:3.90.580.10 1 100 1.5E-40 T 09-03-2017 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 RG43_RS03830 34c5c7b28a7996541eb80ea0040056e7 581 SMART SM00766 450 575 1.4E-48 T 09-03-2017 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 RG43_RS03830 34c5c7b28a7996541eb80ea0040056e7 581 SUPERFAMILY SSF117023 447 579 3.01E-43 T 09-03-2017 RG43_RS03830 34c5c7b28a7996541eb80ea0040056e7 581 SMART SM00493 259 330 2.3E-21 T 09-03-2017 IPR006171 Toprim domain RG43_RS03830 34c5c7b28a7996541eb80ea0040056e7 581 Gene3D G3DSA:1.10.860.10 437 580 4.5E-55 T 09-03-2017 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal RG43_RS03830 34c5c7b28a7996541eb80ea0040056e7 581 SUPERFAMILY SSF57783 4 100 8.67E-36 T 09-03-2017 RG43_RS03830 34c5c7b28a7996541eb80ea0040056e7 581 Pfam PF10410 DnaB-helicase binding domain of primase 369 424 8.3E-13 T 09-03-2017 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 RG43_RS03830 34c5c7b28a7996541eb80ea0040056e7 581 Hamap MF_00974 DNA primase [dnaG]. 4 576 30.621 T 09-03-2017 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 RG43_RS03830 34c5c7b28a7996541eb80ea0040056e7 581 SMART SM00400 36 90 7.6E-38 T 09-03-2017 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 RG43_RS03830 34c5c7b28a7996541eb80ea0040056e7 581 Pfam PF13155 Toprim-like 263 348 4.0E-15 T 09-03-2017 RG43_RS17205 0b06eab3efde23ce54d4f3d54d8c0318 262 SUPERFAMILY SSF46785 2 106 2.61E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS17205 0b06eab3efde23ce54d4f3d54d8c0318 262 SUPERFAMILY SSF50331 200 259 1.74E-14 T 09-03-2017 IPR008995 Molybdate/tungstate binding, C-terminal RG43_RS17205 0b06eab3efde23ce54d4f3d54d8c0318 262 Pfam PF03459 TOBE domain 125 187 6.7E-12 T 09-03-2017 IPR005116 Transport-associated OB, type 1 RG43_RS17205 0b06eab3efde23ce54d4f3d54d8c0318 262 Pfam PF03459 TOBE domain 199 257 9.0E-14 T 09-03-2017 IPR005116 Transport-associated OB, type 1 RG43_RS17205 0b06eab3efde23ce54d4f3d54d8c0318 262 TIGRFAM TIGR00637 ModE_repress: ModE molybdate transport repressor domain 16 113 4.2E-41 T 09-03-2017 IPR003725 Molybdenum-binding protein ModE, N-terminal RG43_RS17205 0b06eab3efde23ce54d4f3d54d8c0318 262 Gene3D G3DSA:2.40.50.100 120 184 7.9E-32 T 09-03-2017 RG43_RS17205 0b06eab3efde23ce54d4f3d54d8c0318 262 SUPERFAMILY SSF50331 123 192 4.62E-17 T 09-03-2017 IPR008995 Molybdate/tungstate binding, C-terminal RG43_RS17205 0b06eab3efde23ce54d4f3d54d8c0318 262 Gene3D G3DSA:1.10.10.10 1 119 3.6E-42 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS17205 0b06eab3efde23ce54d4f3d54d8c0318 262 Gene3D G3DSA:2.40.50.100 185 252 4.9E-23 T 09-03-2017 RG43_RS17205 0b06eab3efde23ce54d4f3d54d8c0318 262 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 83 1.2E-13 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS17205 0b06eab3efde23ce54d4f3d54d8c0318 262 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 123 192 2.7E-28 T 09-03-2017 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 RG43_RS17205 0b06eab3efde23ce54d4f3d54d8c0318 262 PIRSF PIRSF005763 1 262 4.3E-101 T 09-03-2017 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 RG43_RS20520 be7f8942eb74449723892ddbcbe4c4cc 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 8.6E-20 T 09-03-2017 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 RG43_RS20520 be7f8942eb74449723892ddbcbe4c4cc 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 8.6E-20 T 09-03-2017 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 RG43_RS20520 be7f8942eb74449723892ddbcbe4c4cc 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 8.6E-20 T 09-03-2017 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 RG43_RS20520 be7f8942eb74449723892ddbcbe4c4cc 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 8.6E-20 T 09-03-2017 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 RG43_RS20520 be7f8942eb74449723892ddbcbe4c4cc 572 Pfam PF03129 Anticodon binding domain 475 568 3.2E-21 T 09-03-2017 IPR004154 Anticodon-binding RG43_RS20520 be7f8942eb74449723892ddbcbe4c4cc 572 Gene3D G3DSA:3.90.960.10 250 388 6.4E-32 T 09-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RG43_RS20520 be7f8942eb74449723892ddbcbe4c4cc 572 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 3.9E-49 T 09-03-2017 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS20520 be7f8942eb74449723892ddbcbe4c4cc 572 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 43.326 T 09-03-2017 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RG43_RS20520 be7f8942eb74449723892ddbcbe4c4cc 572 Gene3D G3DSA:3.30.930.10 389 471 3.9E-108 T 09-03-2017 RG43_RS20520 be7f8942eb74449723892ddbcbe4c4cc 572 Gene3D G3DSA:3.30.930.10 10 234 3.9E-108 T 09-03-2017 RG43_RS20520 be7f8942eb74449723892ddbcbe4c4cc 572 SUPERFAMILY SSF55681 407 478 5.18E-109 T 09-03-2017 RG43_RS20520 be7f8942eb74449723892ddbcbe4c4cc 572 SUPERFAMILY SSF55681 10 237 5.18E-109 T 09-03-2017 RG43_RS20520 be7f8942eb74449723892ddbcbe4c4cc 572 PIRSF PIRSF001535 1 572 9.3E-279 T 09-03-2017 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RG43_RS20520 be7f8942eb74449723892ddbcbe4c4cc 572 Pfam PF04073 Aminoacyl-tRNA editing domain 257 376 1.4E-26 T 09-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RG43_RS20520 be7f8942eb74449723892ddbcbe4c4cc 572 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 569 9.9E-283 T 09-03-2017 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 RG43_RS20520 be7f8942eb74449723892ddbcbe4c4cc 572 SUPERFAMILY SSF55826 218 390 1.01E-30 T 09-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RG43_RS20520 be7f8942eb74449723892ddbcbe4c4cc 572 Gene3D G3DSA:3.40.50.800 472 570 7.6E-32 T 09-03-2017 IPR004154 Anticodon-binding RG43_RS20520 be7f8942eb74449723892ddbcbe4c4cc 572 SUPERFAMILY SSF52954 463 571 1.21E-33 T 09-03-2017 IPR004154 Anticodon-binding RG43_RS23020 bc273249a8986f0048151773311e9d03 363 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 334 6.8E-8 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS23020 bc273249a8986f0048151773311e9d03 363 PRINTS PR00344 Bacterial sensor protein C-terminal signature 285 299 6.8E-8 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS23020 bc273249a8986f0048151773311e9d03 363 Pfam PF00672 HAMP domain 70 136 3.7E-7 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RG43_RS23020 bc273249a8986f0048151773311e9d03 363 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 249 356 3.4E-17 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS23020 bc273249a8986f0048151773311e9d03 363 SMART SM00387 249 357 2.9E-23 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS23020 bc273249a8986f0048151773311e9d03 363 SUPERFAMILY SSF47384 126 199 2.55E-11 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS23020 bc273249a8986f0048151773311e9d03 363 SMART SM00304 89 141 5.9E-4 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RG43_RS23020 bc273249a8986f0048151773311e9d03 363 Gene3D G3DSA:3.30.565.10 220 355 3.1E-28 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS23020 bc273249a8986f0048151773311e9d03 363 Gene3D G3DSA:1.10.287.130 134 198 4.7E-12 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS23020 bc273249a8986f0048151773311e9d03 363 Pfam PF00512 His Kinase A (phospho-acceptor) domain 144 200 5.4E-9 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS23020 bc273249a8986f0048151773311e9d03 363 SUPERFAMILY SSF55874 192 354 2.36E-27 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS23020 bc273249a8986f0048151773311e9d03 363 SMART SM00388 142 202 3.0E-9 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS05400 8d066fb7aa3fc2c3b9f86d7cf1f3ceec 256 Gene3D G3DSA:3.40.1190.10 14 59 8.1E-6 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RG43_RS05400 8d066fb7aa3fc2c3b9f86d7cf1f3ceec 256 TIGRFAM TIGR03172 TIGR03172: putative selenium-dependent hydroxylase accessory protein YqeC 22 247 3.4E-90 T 09-03-2017 IPR017587 Putative selenium-dependent hydroxylase accessory protein YqeC RG43_RS05400 8d066fb7aa3fc2c3b9f86d7cf1f3ceec 256 SUPERFAMILY SSF53623 14 123 7.23E-8 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RG43_RS05490 5af34e461b0648ea083db1d9daf264f0 472 ProSitePatterns PS00217 Sugar transport proteins signature 2. 121 146 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RG43_RS05490 5af34e461b0648ea083db1d9daf264f0 472 PRINTS PR00171 Sugar transporter signature 362 383 5.3E-20 T 09-03-2017 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 RG43_RS05490 5af34e461b0648ea083db1d9daf264f0 472 PRINTS PR00171 Sugar transporter signature 33 43 5.3E-20 T 09-03-2017 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 RG43_RS05490 5af34e461b0648ea083db1d9daf264f0 472 PRINTS PR00171 Sugar transporter signature 269 279 5.3E-20 T 09-03-2017 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 RG43_RS05490 5af34e461b0648ea083db1d9daf264f0 472 PRINTS PR00171 Sugar transporter signature 385 397 5.3E-20 T 09-03-2017 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 RG43_RS05490 5af34e461b0648ea083db1d9daf264f0 472 PRINTS PR00171 Sugar transporter signature 116 135 5.3E-20 T 09-03-2017 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 RG43_RS05490 5af34e461b0648ea083db1d9daf264f0 472 SUPERFAMILY SSF103473 13 459 2.09E-72 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS05490 5af34e461b0648ea083db1d9daf264f0 472 ProSitePatterns PS00216 Sugar transport proteins signature 1. 314 330 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RG43_RS05490 5af34e461b0648ea083db1d9daf264f0 472 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 6 457 6.2E-149 T 09-03-2017 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 RG43_RS05490 5af34e461b0648ea083db1d9daf264f0 472 Pfam PF00083 Sugar (and other) transporter 26 460 7.8E-133 T 09-03-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RG43_RS05490 5af34e461b0648ea083db1d9daf264f0 472 Gene3D G3DSA:1.20.1250.20 256 458 1.1E-18 T 09-03-2017 RG43_RS05490 5af34e461b0648ea083db1d9daf264f0 472 Gene3D G3DSA:1.20.1250.20 28 208 1.5E-28 T 09-03-2017 RG43_RS17945 723afa78dd8cb0f4392bbdc68d14adc4 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 321 4.8E-164 T 09-03-2017 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 RG43_RS17945 723afa78dd8cb0f4392bbdc68d14adc4 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 157.267 T 09-03-2017 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 RG43_RS17945 723afa78dd8cb0f4392bbdc68d14adc4 321 Gene3D G3DSA:3.20.20.70 55 312 1.2E-71 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS17945 723afa78dd8cb0f4392bbdc68d14adc4 321 PIRSF PIRSF005963 2 321 3.2E-131 T 09-03-2017 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 RG43_RS17945 723afa78dd8cb0f4392bbdc68d14adc4 321 Pfam PF04055 Radical SAM superfamily 91 251 1.1E-14 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 RG43_RS17945 723afa78dd8cb0f4392bbdc68d14adc4 321 SUPERFAMILY SSF102114 52 316 8.76E-68 T 09-03-2017 RG43_RS17945 723afa78dd8cb0f4392bbdc68d14adc4 321 SMART SM00729 84 293 1.9E-15 T 09-03-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RG43_RS17945 723afa78dd8cb0f4392bbdc68d14adc4 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 25 73 9.4E-7 T 09-03-2017 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 RG43_RS05270 a7602a2b0e287a708e60f29ebcb3e988 103 Hamap MF_00684 UPF0267 protein YqfB [yqfB]. 2 103 31.875 T 09-03-2017 IPR008314 Uncharacterised conserved protein UCP029143 RG43_RS05270 a7602a2b0e287a708e60f29ebcb3e988 103 Gene3D G3DSA:2.30.130.30 1 102 3.1E-49 T 09-03-2017 RG43_RS05270 a7602a2b0e287a708e60f29ebcb3e988 103 PIRSF PIRSF029143 1 103 1.4E-50 T 09-03-2017 IPR008314 Uncharacterised conserved protein UCP029143 RG43_RS05270 a7602a2b0e287a708e60f29ebcb3e988 103 SMART SM01022 6 102 1.2E-26 T 09-03-2017 IPR007374 ASCH domain RG43_RS05270 a7602a2b0e287a708e60f29ebcb3e988 103 SUPERFAMILY SSF88697 1 102 4.97E-33 T 09-03-2017 IPR015947 PUA-like domain RG43_RS05270 a7602a2b0e287a708e60f29ebcb3e988 103 Pfam PF04266 ASCH domain 6 101 3.1E-15 T 09-03-2017 IPR007374 ASCH domain RG43_RS05365 5ac6bc6f44a35be420b2e6957287ea6d 439 Pfam PF01979 Amidohydrolase family 74 435 4.8E-84 T 09-03-2017 IPR006680 Amidohydrolase-related GO:0016787 RG43_RS05365 5ac6bc6f44a35be420b2e6957287ea6d 439 Gene3D G3DSA:2.30.40.10 33 82 2.1E-7 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RG43_RS05365 5ac6bc6f44a35be420b2e6957287ea6d 439 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 33 432 2.5E-191 T 09-03-2017 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|Reactome: R-HSA-74259 RG43_RS05365 5ac6bc6f44a35be420b2e6957287ea6d 439 SUPERFAMILY SSF51556 76 379 5.53E-105 T 09-03-2017 IPR032466 Metal-dependent hydrolase RG43_RS05365 5ac6bc6f44a35be420b2e6957287ea6d 439 Gene3D G3DSA:2.30.40.10 365 438 3.0E-7 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RG43_RS05365 5ac6bc6f44a35be420b2e6957287ea6d 439 SUPERFAMILY SSF51338 33 91 4.32E-9 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RG43_RS05365 5ac6bc6f44a35be420b2e6957287ea6d 439 Gene3D G3DSA:3.20.20.140 83 364 1.2E-119 T 09-03-2017 RG43_RS00735 e52144ba863b142f9f824275d6d8b500 382 SUPERFAMILY SSF51735 1 203 7.59E-44 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS00735 e52144ba863b142f9f824275d6d8b500 382 Gene3D G3DSA:1.10.1040.10 203 381 8.2E-51 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RG43_RS00735 e52144ba863b142f9f824275d6d8b500 382 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 148 373 3.6E-69 T 09-03-2017 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 RG43_RS00735 e52144ba863b142f9f824275d6d8b500 382 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 150 162 - T 09-03-2017 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 RG43_RS00735 e52144ba863b142f9f824275d6d8b500 382 SUPERFAMILY SSF48179 204 381 5.1E-47 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RG43_RS00735 e52144ba863b142f9f824275d6d8b500 382 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 1 123 4.8E-27 T 09-03-2017 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 RG43_RS00735 e52144ba863b142f9f824275d6d8b500 382 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 1 378 42.149 T 09-03-2017 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 RG43_RS00735 e52144ba863b142f9f824275d6d8b500 382 Gene3D G3DSA:3.40.50.720 2 202 2.0E-37 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS00735 e52144ba863b142f9f824275d6d8b500 382 PRINTS PR00084 Mannitol dehydrogenase signature 3 13 9.8E-18 T 09-03-2017 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 RG43_RS00735 e52144ba863b142f9f824275d6d8b500 382 PRINTS PR00084 Mannitol dehydrogenase signature 114 127 9.8E-18 T 09-03-2017 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 RG43_RS00735 e52144ba863b142f9f824275d6d8b500 382 PRINTS PR00084 Mannitol dehydrogenase signature 170 185 9.8E-18 T 09-03-2017 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 RG43_RS00735 e52144ba863b142f9f824275d6d8b500 382 PRINTS PR00084 Mannitol dehydrogenase signature 150 163 9.8E-18 T 09-03-2017 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 RG43_RS04105 e2a2b2bba279fdefb82b38a396f1fec2 193 SUPERFAMILY SSF52218 1 192 5.29E-42 T 09-03-2017 IPR029039 Flavoprotein-like domain RG43_RS04105 e2a2b2bba279fdefb82b38a396f1fec2 193 Gene3D G3DSA:3.40.50.360 1 192 5.2E-44 T 09-03-2017 IPR029039 Flavoprotein-like domain RG43_RS04105 e2a2b2bba279fdefb82b38a396f1fec2 193 Pfam PF02525 Flavodoxin-like fold 3 188 1.8E-36 T 09-03-2017 IPR003680 Flavodoxin-like fold RG43_RS26480 e2a2b2bba279fdefb82b38a396f1fec2 193 SUPERFAMILY SSF52218 1 192 5.29E-42 T 09-03-2017 IPR029039 Flavoprotein-like domain RG43_RS26480 e2a2b2bba279fdefb82b38a396f1fec2 193 Gene3D G3DSA:3.40.50.360 1 192 5.2E-44 T 09-03-2017 IPR029039 Flavoprotein-like domain RG43_RS26480 e2a2b2bba279fdefb82b38a396f1fec2 193 Pfam PF02525 Flavodoxin-like fold 3 188 1.8E-36 T 09-03-2017 IPR003680 Flavodoxin-like fold RG43_RS08475 f35df5d74df1ed61459d655e5bb8b046 128 Hamap MF_00538 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF [arnF]. 1 125 20.384 T 09-03-2017 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF RG43_RS08475 f35df5d74df1ed61459d655e5bb8b046 128 SUPERFAMILY SSF103481 47 124 2.09E-5 T 09-03-2017 RG43_RS08965 3bcb418ead7ca05e10ec04f2ece952ad 313 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 250 263 - T 09-03-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RG43_RS08965 3bcb418ead7ca05e10ec04f2ece952ad 313 Pfam PF00294 pfkB family carbohydrate kinase 5 295 1.2E-64 T 09-03-2017 IPR011611 Carbohydrate kinase PfkB RG43_RS08965 3bcb418ead7ca05e10ec04f2ece952ad 313 Gene3D G3DSA:3.40.1190.20 6 305 9.5E-67 T 09-03-2017 IPR029056 Ribokinase-like RG43_RS08965 3bcb418ead7ca05e10ec04f2ece952ad 313 SUPERFAMILY SSF53613 7 306 2.65E-58 T 09-03-2017 IPR029056 Ribokinase-like RG43_RS08965 3bcb418ead7ca05e10ec04f2ece952ad 313 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 40 64 - T 09-03-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RG43_RS02545 2d79d9ad725796419426e7aaea97526e 190 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 7 188 41.06 T 09-03-2017 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 RG43_RS02545 2d79d9ad725796419426e7aaea97526e 190 SUPERFAMILY SSF55821 4 187 3.66E-56 T 09-03-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain RG43_RS02545 2d79d9ad725796419426e7aaea97526e 190 Gene3D G3DSA:3.90.870.10 3 190 5.1E-55 T 09-03-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain RG43_RS02545 2d79d9ad725796419426e7aaea97526e 190 Pfam PF01300 Telomere recombination 16 189 9.4E-42 T 09-03-2017 IPR006070 YrdC-like domain GO:0003725 RG43_RS21085 6ef44a01f28603d0fce96411cd643f35 491 Gene3D G3DSA:3.40.50.720 20 107 1.5E-36 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS21085 6ef44a01f28603d0fce96411cd643f35 491 SUPERFAMILY SSF51984 20 106 2.88E-29 T 09-03-2017 RG43_RS21085 6ef44a01f28603d0fce96411cd643f35 491 SUPERFAMILY SSF53244 323 476 2.56E-44 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 RG43_RS21085 6ef44a01f28603d0fce96411cd643f35 491 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 19 481 43.326 T 09-03-2017 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RG43_RS21085 6ef44a01f28603d0fce96411cd643f35 491 SUPERFAMILY SSF53623 105 322 1.31E-74 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RG43_RS21085 6ef44a01f28603d0fce96411cd643f35 491 Pfam PF01225 Mur ligase family, catalytic domain 21 118 9.0E-30 T 09-03-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 RG43_RS21085 6ef44a01f28603d0fce96411cd643f35 491 Pfam PF08245 Mur ligase middle domain 124 304 5.7E-28 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RG43_RS21085 6ef44a01f28603d0fce96411cd643f35 491 Gene3D G3DSA:3.40.1190.10 108 325 5.9E-86 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RG43_RS21085 6ef44a01f28603d0fce96411cd643f35 491 Pfam PF02875 Mur ligase family, glutamate ligase domain 327 418 1.7E-19 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 RG43_RS21085 6ef44a01f28603d0fce96411cd643f35 491 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 21 475 8.8E-184 T 09-03-2017 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RG43_RS21085 6ef44a01f28603d0fce96411cd643f35 491 Gene3D G3DSA:3.90.190.20 326 477 3.7E-54 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 RG43_RS21030 6042c2c8b31c1b1df3d432e4373daed7 247 Hamap MF_01092 Cell division protein ZapD [zapD]. 4 247 32.95 T 09-03-2017 IPR009777 Cell division protein ZapD RG43_RS21030 6042c2c8b31c1b1df3d432e4373daed7 247 Gene3D G3DSA:1.10.3900.10 13 173 5.2E-67 T 09-03-2017 RG43_RS21030 6042c2c8b31c1b1df3d432e4373daed7 247 SUPERFAMILY SSF160950 4 247 4.58E-93 T 09-03-2017 RG43_RS21030 6042c2c8b31c1b1df3d432e4373daed7 247 Gene3D G3DSA:2.60.440.10 174 247 2.6E-36 T 09-03-2017 IPR027462 Z ring-associated protein D, C-terminal domain RG43_RS21030 6042c2c8b31c1b1df3d432e4373daed7 247 Pfam PF07072 Protein of unknown function (DUF1342) 19 225 2.5E-78 T 09-03-2017 IPR009777 Cell division protein ZapD RG43_RS09700 33ff9ae46c13cef9476bac134d76f4b9 337 SUPERFAMILY SSF51735 1 336 1.44E-93 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS09700 33ff9ae46c13cef9476bac134d76f4b9 337 PRINTS PR01713 Nucleotide sugar epimerase signature 231 246 7.2E-6 T 09-03-2017 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 RG43_RS09700 33ff9ae46c13cef9476bac134d76f4b9 337 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 7.2E-6 T 09-03-2017 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 RG43_RS09700 33ff9ae46c13cef9476bac134d76f4b9 337 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 7.2E-6 T 09-03-2017 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 RG43_RS09700 33ff9ae46c13cef9476bac134d76f4b9 337 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 335 1.2E-133 T 09-03-2017 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 RG43_RS09700 33ff9ae46c13cef9476bac134d76f4b9 337 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 322 8.1E-55 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS09700 33ff9ae46c13cef9476bac134d76f4b9 337 Gene3D G3DSA:3.40.50.720 1 179 3.2E-51 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS09700 33ff9ae46c13cef9476bac134d76f4b9 337 Gene3D G3DSA:3.90.25.10 264 337 1.4E-48 T 09-03-2017 RG43_RS09700 33ff9ae46c13cef9476bac134d76f4b9 337 Gene3D G3DSA:3.90.25.10 180 232 1.4E-48 T 09-03-2017 RG43_RS24010 f9efa9a04fcd7543b028005907d4639c 367 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 348 6.6E-64 T 09-03-2017 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 RG43_RS24010 f9efa9a04fcd7543b028005907d4639c 367 PIRSF PIRSF000112 1 360 1.2E-98 T 09-03-2017 RG43_RS24010 f9efa9a04fcd7543b028005907d4639c 367 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 150 178 - T 09-03-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 RG43_RS24010 f9efa9a04fcd7543b028005907d4639c 367 Gene3D G3DSA:3.40.50.1970 2 158 3.5E-44 T 09-03-2017 RG43_RS24010 f9efa9a04fcd7543b028005907d4639c 367 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 241 261 - T 09-03-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 RG43_RS24010 f9efa9a04fcd7543b028005907d4639c 367 Gene3D G3DSA:1.20.1090.10 160 364 3.5E-70 T 09-03-2017 RG43_RS24010 f9efa9a04fcd7543b028005907d4639c 367 SUPERFAMILY SSF56796 3 355 1.44E-88 T 09-03-2017 RG43_RS22510 4d776f2becc435db4210658806b3f9df 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 09-03-2017 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS22510 4d776f2becc435db4210658806b3f9df 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.313 T 09-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS22510 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.3E-18 T 09-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS22510 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.3E-18 T 09-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS22510 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.3E-18 T 09-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS22510 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.3E-18 T 09-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS22510 4d776f2becc435db4210658806b3f9df 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 8.1E-38 T 09-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS22510 4d776f2becc435db4210658806b3f9df 75 Pfam PF01084 Ribosomal protein S18 19 68 7.8E-25 T 09-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS22510 4d776f2becc435db4210658806b3f9df 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 3.0E-22 T 09-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS22510 4d776f2becc435db4210658806b3f9df 75 SUPERFAMILY SSF46911 3 74 7.06E-29 T 09-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS22510 4d776f2becc435db4210658806b3f9df 75 Gene3D G3DSA:4.10.640.10 8 74 1.1E-32 T 09-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS19280 49f5aab847431e5b9d173eb0199e3347 417 ProSitePatterns PS00897 LacY family proton/sugar symporters signature 2. 280 294 - T 09-03-2017 IPR018457 LacY/RafB permease family, conserved site GO:0006810|GO:0016020 RG43_RS19280 49f5aab847431e5b9d173eb0199e3347 417 Pfam PF01306 LacY proton/sugar symporter 2 412 1.3E-205 T 09-03-2017 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 RG43_RS19280 49f5aab847431e5b9d173eb0199e3347 417 SUPERFAMILY SSF103473 6 401 1.22E-47 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS19280 49f5aab847431e5b9d173eb0199e3347 417 PRINTS PR00174 LacY proton/sugar symporter family signature 315 334 2.3E-111 T 09-03-2017 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 RG43_RS19280 49f5aab847431e5b9d173eb0199e3347 417 PRINTS PR00174 LacY proton/sugar symporter family signature 214 242 2.3E-111 T 09-03-2017 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 RG43_RS19280 49f5aab847431e5b9d173eb0199e3347 417 PRINTS PR00174 LacY proton/sugar symporter family signature 103 125 2.3E-111 T 09-03-2017 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 RG43_RS19280 49f5aab847431e5b9d173eb0199e3347 417 PRINTS PR00174 LacY proton/sugar symporter family signature 145 163 2.3E-111 T 09-03-2017 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 RG43_RS19280 49f5aab847431e5b9d173eb0199e3347 417 PRINTS PR00174 LacY proton/sugar symporter family signature 260 281 2.3E-111 T 09-03-2017 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 RG43_RS19280 49f5aab847431e5b9d173eb0199e3347 417 PRINTS PR00174 LacY proton/sugar symporter family signature 284 310 2.3E-111 T 09-03-2017 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 RG43_RS19280 49f5aab847431e5b9d173eb0199e3347 417 PRINTS PR00174 LacY proton/sugar symporter family signature 68 97 2.3E-111 T 09-03-2017 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 RG43_RS19280 49f5aab847431e5b9d173eb0199e3347 417 PRINTS PR00174 LacY proton/sugar symporter family signature 346 366 2.3E-111 T 09-03-2017 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 RG43_RS19280 49f5aab847431e5b9d173eb0199e3347 417 Gene3D G3DSA:1.20.1250.20 4 189 1.4E-38 T 09-03-2017 RG43_RS19280 49f5aab847431e5b9d173eb0199e3347 417 Gene3D G3DSA:1.20.1250.20 209 408 2.9E-44 T 09-03-2017 RG43_RS19280 49f5aab847431e5b9d173eb0199e3347 417 ProSitePatterns PS00896 LacY family proton/sugar symporters signature 1. 64 78 - T 09-03-2017 IPR018457 LacY/RafB permease family, conserved site GO:0006810|GO:0016020 RG43_RS19280 49f5aab847431e5b9d173eb0199e3347 417 TIGRFAM TIGR00882 2A0105: oligosaccharide:H+ symporter 6 401 6.1E-209 T 09-03-2017 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 RG43_RS13155 74e5cec6af1c903fb43299ed189f1cfa 336 Pfam PF00107 Zinc-binding dehydrogenase 172 298 7.2E-29 T 09-03-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RG43_RS13155 74e5cec6af1c903fb43299ed189f1cfa 336 Gene3D G3DSA:3.40.50.720 165 282 9.9E-33 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS13155 74e5cec6af1c903fb43299ed189f1cfa 336 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 131 3.8E-29 T 09-03-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RG43_RS13155 74e5cec6af1c903fb43299ed189f1cfa 336 SUPERFAMILY SSF51735 135 302 1.63E-39 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS13155 74e5cec6af1c903fb43299ed189f1cfa 336 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 57 71 - T 09-03-2017 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 RG43_RS13155 74e5cec6af1c903fb43299ed189f1cfa 336 SMART SM00829 8 332 6.7E-7 T 09-03-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RG43_RS13155 74e5cec6af1c903fb43299ed189f1cfa 336 SUPERFAMILY SSF50129 1 169 4.26E-47 T 09-03-2017 IPR011032 GroES-like RG43_RS13155 74e5cec6af1c903fb43299ed189f1cfa 336 Gene3D G3DSA:3.90.180.10 1 164 4.8E-59 T 09-03-2017 IPR011032 GroES-like RG43_RS07715 d0ae1ba21af2b0518db9edaf71059e97 294 Gene3D G3DSA:1.10.10.10 8 92 2.6E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS07715 d0ae1ba21af2b0518db9edaf71059e97 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 7.9E-22 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS07715 d0ae1ba21af2b0518db9edaf71059e97 294 Gene3D G3DSA:3.40.190.10 94 182 5.3E-19 T 09-03-2017 RG43_RS07715 d0ae1ba21af2b0518db9edaf71059e97 294 SUPERFAMILY SSF46785 8 92 1.6E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS07715 d0ae1ba21af2b0518db9edaf71059e97 294 SUPERFAMILY SSF53850 94 292 1.18E-30 T 09-03-2017 RG43_RS07715 d0ae1ba21af2b0518db9edaf71059e97 294 Pfam PF03466 LysR substrate binding domain 93 292 2.4E-38 T 09-03-2017 IPR005119 LysR, substrate-binding RG43_RS07715 d0ae1ba21af2b0518db9edaf71059e97 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 1.7E-9 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS07715 d0ae1ba21af2b0518db9edaf71059e97 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 1.7E-9 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS07715 d0ae1ba21af2b0518db9edaf71059e97 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 1.7E-9 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS07715 d0ae1ba21af2b0518db9edaf71059e97 294 Gene3D G3DSA:3.40.190.10 183 269 3.0E-23 T 09-03-2017 RG43_RS09595 f996b3b05381c918a1ae65365517adde 478 SUPERFAMILY SSF53448 6 290 3.38E-74 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS09595 f996b3b05381c918a1ae65365517adde 478 Pfam PF01050 Mannose-6-phosphate isomerase 323 473 1.1E-74 T 09-03-2017 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 RG43_RS09595 f996b3b05381c918a1ae65365517adde 478 Gene3D G3DSA:3.90.550.10 4 279 3.5E-101 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS09595 f996b3b05381c918a1ae65365517adde 478 SUPERFAMILY SSF51182 193 477 1.36E-88 T 09-03-2017 IPR011051 RmlC-like cupin domain RG43_RS09595 f996b3b05381c918a1ae65365517adde 478 Gene3D G3DSA:2.60.120.10 365 477 4.0E-47 T 09-03-2017 IPR014710 RmlC-like jelly roll fold RG43_RS09595 f996b3b05381c918a1ae65365517adde 478 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 6 477 4.9E-244 T 09-03-2017 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 RG43_RS09595 f996b3b05381c918a1ae65365517adde 478 Pfam PF00483 Nucleotidyl transferase 8 295 4.9E-79 T 09-03-2017 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 RG43_RS18620 9e84704e8a8cd42591e1ffc8953a5501 201 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 09-03-2017 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 RG43_RS18620 9e84704e8a8cd42591e1ffc8953a5501 201 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 104.396 T 09-03-2017 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 RG43_RS18620 9e84704e8a8cd42591e1ffc8953a5501 201 Gene3D G3DSA:3.40.50.140 135 171 0.001 T 09-03-2017 IPR006171 Toprim domain RG43_RS18620 9e84704e8a8cd42591e1ffc8953a5501 201 SUPERFAMILY SSF111304 2 199 7.45E-73 T 09-03-2017 IPR023627 Recombination protein RecR RG43_RS18620 9e84704e8a8cd42591e1ffc8953a5501 201 SMART SM00493 81 166 2.1E-20 T 09-03-2017 IPR006171 Toprim domain RG43_RS18620 9e84704e8a8cd42591e1ffc8953a5501 201 Pfam PF13662 Toprim domain 82 172 1.7E-24 T 09-03-2017 IPR006171 Toprim domain RG43_RS18620 9e84704e8a8cd42591e1ffc8953a5501 201 TIGRFAM TIGR00615 recR: recombination protein RecR 2 197 7.8E-85 T 09-03-2017 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 RG43_RS18620 9e84704e8a8cd42591e1ffc8953a5501 201 Pfam PF02132 RecR protein 41 77 3.5E-15 T 09-03-2017 IPR023628 Recombination protein RecR, C4-type zinc finger RG43_RS26195 c3d1f75516868ba69218b29b229d063a 613 Pfam PF04542 Sigma-70 region 2 379 448 1.7E-21 T 09-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS26195 c3d1f75516868ba69218b29b229d063a 613 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 612 46.822 T 09-03-2017 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 RG43_RS26195 c3d1f75516868ba69218b29b229d063a 613 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 572 598 - T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS26195 c3d1f75516868ba69218b29b229d063a 613 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 375 611 1.3E-120 T 09-03-2017 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 RG43_RS26195 c3d1f75516868ba69218b29b229d063a 613 Pfam PF00140 Sigma-70 factor, region 1.2 96 126 1.4E-12 T 09-03-2017 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS26195 c3d1f75516868ba69218b29b229d063a 613 SUPERFAMILY SSF88946 113 446 8.9E-104 T 09-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS26195 c3d1f75516868ba69218b29b229d063a 613 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 403 416 - T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS26195 c3d1f75516868ba69218b29b229d063a 613 Pfam PF04546 Sigma-70, non-essential region 137 348 2.3E-75 T 09-03-2017 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS26195 c3d1f75516868ba69218b29b229d063a 613 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 375 600 3.5E-38 T 09-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS26195 c3d1f75516868ba69218b29b229d063a 613 SUPERFAMILY SSF88659 509 611 2.55E-25 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS26195 c3d1f75516868ba69218b29b229d063a 613 Gene3D G3DSA:1.10.601.10 110 448 1.8E-140 T 09-03-2017 RG43_RS26195 c3d1f75516868ba69218b29b229d063a 613 Pfam PF03979 Sigma-70 factor, region 1.1 4 79 2.8E-30 T 09-03-2017 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 RG43_RS26195 c3d1f75516868ba69218b29b229d063a 613 Pfam PF04539 Sigma-70 region 3 458 533 3.4E-29 T 09-03-2017 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS26195 c3d1f75516868ba69218b29b229d063a 613 Gene3D G3DSA:1.10.10.10 543 612 1.3E-32 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS26195 c3d1f75516868ba69218b29b229d063a 613 PRINTS PR00046 Major sigma-70 factor signature 427 435 6.3E-31 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS26195 c3d1f75516868ba69218b29b229d063a 613 PRINTS PR00046 Major sigma-70 factor signature 572 587 6.3E-31 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS26195 c3d1f75516868ba69218b29b229d063a 613 PRINTS PR00046 Major sigma-70 factor signature 551 563 6.3E-31 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS26195 c3d1f75516868ba69218b29b229d063a 613 PRINTS PR00046 Major sigma-70 factor signature 587 598 6.3E-31 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS26195 c3d1f75516868ba69218b29b229d063a 613 PRINTS PR00046 Major sigma-70 factor signature 403 416 6.3E-31 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS26195 c3d1f75516868ba69218b29b229d063a 613 SUPERFAMILY SSF88659 452 525 8.78E-21 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS26195 c3d1f75516868ba69218b29b229d063a 613 Gene3D G3DSA:1.10.10.10 452 503 1.8E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS26195 c3d1f75516868ba69218b29b229d063a 613 Pfam PF04545 Sigma-70, region 4 547 600 8.9E-19 T 09-03-2017 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS03820 c3d1f75516868ba69218b29b229d063a 613 Pfam PF04542 Sigma-70 region 2 379 448 1.7E-21 T 09-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS03820 c3d1f75516868ba69218b29b229d063a 613 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 612 46.822 T 09-03-2017 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 RG43_RS03820 c3d1f75516868ba69218b29b229d063a 613 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 572 598 - T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS03820 c3d1f75516868ba69218b29b229d063a 613 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 375 611 1.3E-120 T 09-03-2017 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 RG43_RS03820 c3d1f75516868ba69218b29b229d063a 613 Pfam PF00140 Sigma-70 factor, region 1.2 96 126 1.4E-12 T 09-03-2017 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS03820 c3d1f75516868ba69218b29b229d063a 613 SUPERFAMILY SSF88946 113 446 8.9E-104 T 09-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS03820 c3d1f75516868ba69218b29b229d063a 613 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 403 416 - T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS03820 c3d1f75516868ba69218b29b229d063a 613 Pfam PF04546 Sigma-70, non-essential region 137 348 2.3E-75 T 09-03-2017 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS03820 c3d1f75516868ba69218b29b229d063a 613 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 375 600 3.5E-38 T 09-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS03820 c3d1f75516868ba69218b29b229d063a 613 SUPERFAMILY SSF88659 509 611 2.55E-25 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS03820 c3d1f75516868ba69218b29b229d063a 613 Gene3D G3DSA:1.10.601.10 110 448 1.8E-140 T 09-03-2017 RG43_RS03820 c3d1f75516868ba69218b29b229d063a 613 Pfam PF03979 Sigma-70 factor, region 1.1 4 79 2.8E-30 T 09-03-2017 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 RG43_RS03820 c3d1f75516868ba69218b29b229d063a 613 Pfam PF04539 Sigma-70 region 3 458 533 3.4E-29 T 09-03-2017 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS03820 c3d1f75516868ba69218b29b229d063a 613 Gene3D G3DSA:1.10.10.10 543 612 1.3E-32 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS03820 c3d1f75516868ba69218b29b229d063a 613 PRINTS PR00046 Major sigma-70 factor signature 427 435 6.3E-31 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS03820 c3d1f75516868ba69218b29b229d063a 613 PRINTS PR00046 Major sigma-70 factor signature 572 587 6.3E-31 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS03820 c3d1f75516868ba69218b29b229d063a 613 PRINTS PR00046 Major sigma-70 factor signature 551 563 6.3E-31 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS03820 c3d1f75516868ba69218b29b229d063a 613 PRINTS PR00046 Major sigma-70 factor signature 587 598 6.3E-31 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS03820 c3d1f75516868ba69218b29b229d063a 613 PRINTS PR00046 Major sigma-70 factor signature 403 416 6.3E-31 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS03820 c3d1f75516868ba69218b29b229d063a 613 SUPERFAMILY SSF88659 452 525 8.78E-21 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS03820 c3d1f75516868ba69218b29b229d063a 613 Gene3D G3DSA:1.10.10.10 452 503 1.8E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS03820 c3d1f75516868ba69218b29b229d063a 613 Pfam PF04545 Sigma-70, region 4 547 600 8.9E-19 T 09-03-2017 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS18065 cc8dae45493f50a25903fe5a18e30e6d 300 Pfam PF03466 LysR substrate binding domain 137 299 5.5E-10 T 09-03-2017 IPR005119 LysR, substrate-binding RG43_RS18065 cc8dae45493f50a25903fe5a18e30e6d 300 Gene3D G3DSA:1.10.10.10 5 89 4.4E-29 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS18065 cc8dae45493f50a25903fe5a18e30e6d 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 70 5.6E-19 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS18065 cc8dae45493f50a25903fe5a18e30e6d 300 SUPERFAMILY SSF46785 8 91 3.16E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS18065 cc8dae45493f50a25903fe5a18e30e6d 300 SUPERFAMILY SSF53850 116 297 7.24E-18 T 09-03-2017 RG43_RS18065 cc8dae45493f50a25903fe5a18e30e6d 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 38 9.4E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS18065 cc8dae45493f50a25903fe5a18e30e6d 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 48 9.4E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS18065 cc8dae45493f50a25903fe5a18e30e6d 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 59 9.4E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS18065 cc8dae45493f50a25903fe5a18e30e6d 300 Gene3D G3DSA:3.40.190.10 176 270 1.3E-6 T 09-03-2017 RG43_RS01400 4894d9e18a27efcaf8414a6dca16d686 450 Gene3D G3DSA:3.50.50.60 247 333 1.7E-26 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS01400 4894d9e18a27efcaf8414a6dca16d686 450 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 318 4.4E-70 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS01400 4894d9e18a27efcaf8414a6dca16d686 450 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 09-03-2017 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 RG43_RS01400 4894d9e18a27efcaf8414a6dca16d686 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 3.8E-28 T 09-03-2017 RG43_RS01400 4894d9e18a27efcaf8414a6dca16d686 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 3.8E-28 T 09-03-2017 RG43_RS01400 4894d9e18a27efcaf8414a6dca16d686 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 3.8E-28 T 09-03-2017 RG43_RS01400 4894d9e18a27efcaf8414a6dca16d686 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 3.8E-28 T 09-03-2017 RG43_RS01400 4894d9e18a27efcaf8414a6dca16d686 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 3.8E-28 T 09-03-2017 RG43_RS01400 4894d9e18a27efcaf8414a6dca16d686 450 PIRSF PIRSF000350 1 447 1.8E-87 T 09-03-2017 RG43_RS01400 4894d9e18a27efcaf8414a6dca16d686 450 Gene3D G3DSA:3.50.50.60 146 246 7.9E-31 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS01400 4894d9e18a27efcaf8414a6dca16d686 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 7.2E-66 T 09-03-2017 RG43_RS01400 4894d9e18a27efcaf8414a6dca16d686 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 7.2E-66 T 09-03-2017 RG43_RS01400 4894d9e18a27efcaf8414a6dca16d686 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 7.2E-66 T 09-03-2017 RG43_RS01400 4894d9e18a27efcaf8414a6dca16d686 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 335 356 7.2E-66 T 09-03-2017 RG43_RS01400 4894d9e18a27efcaf8414a6dca16d686 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 7.2E-66 T 09-03-2017 RG43_RS01400 4894d9e18a27efcaf8414a6dca16d686 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 424 444 7.2E-66 T 09-03-2017 RG43_RS01400 4894d9e18a27efcaf8414a6dca16d686 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 402 417 7.2E-66 T 09-03-2017 RG43_RS01400 4894d9e18a27efcaf8414a6dca16d686 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 7.2E-66 T 09-03-2017 RG43_RS01400 4894d9e18a27efcaf8414a6dca16d686 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 7.2E-66 T 09-03-2017 RG43_RS01400 4894d9e18a27efcaf8414a6dca16d686 450 Gene3D G3DSA:3.30.390.30 338 450 2.5E-45 T 09-03-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RG43_RS01400 4894d9e18a27efcaf8414a6dca16d686 450 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 339 449 1.7E-35 T 09-03-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RG43_RS01400 4894d9e18a27efcaf8414a6dca16d686 450 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 3 450 2.9E-219 T 09-03-2017 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 RG43_RS01400 4894d9e18a27efcaf8414a6dca16d686 450 Gene3D G3DSA:3.50.50.60 3 143 9.6E-45 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS01400 4894d9e18a27efcaf8414a6dca16d686 450 SUPERFAMILY SSF51905 1 365 1.14E-56 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS01400 4894d9e18a27efcaf8414a6dca16d686 450 SUPERFAMILY SSF55424 336 450 5.84E-37 T 09-03-2017 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RG43_RS20765 07936e8b0ab418601a5bfcece6a3ce6e 844 PIRSF PIRSF002799 13 843 0.0 T 09-03-2017 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 RG43_RS20765 07936e8b0ab418601a5bfcece6a3ce6e 844 Gene3D G3DSA:1.20.5.100 54 96 2.6E-25 T 09-03-2017 RG43_RS20765 07936e8b0ab418601a5bfcece6a3ce6e 844 Gene3D G3DSA:3.30.2060.10 111 200 1.2E-34 T 09-03-2017 RG43_RS20765 07936e8b0ab418601a5bfcece6a3ce6e 844 Gene3D G3DSA:1.10.3810.10 205 381 7.2E-63 T 09-03-2017 RG43_RS20765 07936e8b0ab418601a5bfcece6a3ce6e 844 SUPERFAMILY SSF53955 196 403 2.14E-65 T 09-03-2017 IPR023346 Lysozyme-like domain RG43_RS20765 07936e8b0ab418601a5bfcece6a3ce6e 844 Pfam PF00905 Penicillin binding protein transpeptidase domain 473 715 8.2E-24 T 09-03-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RG43_RS20765 07936e8b0ab418601a5bfcece6a3ce6e 844 Pfam PF00912 Transglycosylase 209 380 2.4E-54 T 09-03-2017 IPR001264 Glycosyl transferase, family 51 RG43_RS20765 07936e8b0ab418601a5bfcece6a3ce6e 844 Pfam PF14814 Bifunctional transglycosylase second domain 113 197 7.9E-28 T 09-03-2017 IPR028166 Bifunctional transglycosylase second domain KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 RG43_RS20765 07936e8b0ab418601a5bfcece6a3ce6e 844 SUPERFAMILY SSF56601 412 778 1.07E-103 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like RG43_RS20765 07936e8b0ab418601a5bfcece6a3ce6e 844 SUPERFAMILY SSF56601 362 384 1.07E-103 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like RG43_RS20765 07936e8b0ab418601a5bfcece6a3ce6e 844 Gene3D G3DSA:3.40.710.10 382 798 1.2E-110 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like RG43_RS20765 07936e8b0ab418601a5bfcece6a3ce6e 844 Pfam PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal 1 79 1.8E-26 T 09-03-2017 IPR032730 Transglycosylase PBP1b, N-terminal transmembrane domain RG43_RS20765 07936e8b0ab418601a5bfcece6a3ce6e 844 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 68 795 0.0 T 09-03-2017 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 RG43_RS26530 fc2c0561729743e81bebacbedef44057 739 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 28 693 50.074 T 09-03-2017 IPR022946 Uncharacterised protein family UPF0313 RG43_RS26530 fc2c0561729743e81bebacbedef44057 739 Gene3D G3DSA:3.80.30.20 374 642 3.4E-47 T 09-03-2017 IPR023404 Radical SAM, alpha/beta horseshoe RG43_RS26530 fc2c0561729743e81bebacbedef44057 739 SMART SM00729 376 623 4.1E-5 T 09-03-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RG43_RS26530 fc2c0561729743e81bebacbedef44057 739 SUPERFAMILY SSF102114 377 440 1.18E-10 T 09-03-2017 RG43_RS26530 fc2c0561729743e81bebacbedef44057 739 SUPERFAMILY SSF102114 470 624 1.18E-10 T 09-03-2017 RG43_RS26530 fc2c0561729743e81bebacbedef44057 739 Pfam PF04055 Radical SAM superfamily 380 585 1.5E-19 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 RG43_RS26530 fc2c0561729743e81bebacbedef44057 739 Pfam PF08497 Radical SAM N-terminal 29 379 4.0E-146 T 09-03-2017 IPR013704 Uncharacterised protein family UPF0313, N-terminal RG43_RS26530 fc2c0561729743e81bebacbedef44057 739 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 29 644 1.5E-266 T 09-03-2017 IPR022946 Uncharacterised protein family UPF0313 RG43_RS26530 fc2c0561729743e81bebacbedef44057 739 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 380 400 - T 09-03-2017 IPR020612 Methylthiotransferase, conserved site GO:0051539 RG43_RS26530 fc2c0561729743e81bebacbedef44057 739 Pfam PF11842 Domain of unknown function (DUF3362) 594 726 5.3E-45 T 09-03-2017 IPR024560 Uncharacterised protein family UPF0313, C-terminal RG43_RS04155 fc2c0561729743e81bebacbedef44057 739 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 28 693 50.074 T 09-03-2017 IPR022946 Uncharacterised protein family UPF0313 RG43_RS04155 fc2c0561729743e81bebacbedef44057 739 Gene3D G3DSA:3.80.30.20 374 642 3.4E-47 T 09-03-2017 IPR023404 Radical SAM, alpha/beta horseshoe RG43_RS04155 fc2c0561729743e81bebacbedef44057 739 SMART SM00729 376 623 4.1E-5 T 09-03-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RG43_RS04155 fc2c0561729743e81bebacbedef44057 739 SUPERFAMILY SSF102114 377 440 1.18E-10 T 09-03-2017 RG43_RS04155 fc2c0561729743e81bebacbedef44057 739 SUPERFAMILY SSF102114 470 624 1.18E-10 T 09-03-2017 RG43_RS04155 fc2c0561729743e81bebacbedef44057 739 Pfam PF04055 Radical SAM superfamily 380 585 1.5E-19 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 RG43_RS04155 fc2c0561729743e81bebacbedef44057 739 Pfam PF08497 Radical SAM N-terminal 29 379 4.0E-146 T 09-03-2017 IPR013704 Uncharacterised protein family UPF0313, N-terminal RG43_RS04155 fc2c0561729743e81bebacbedef44057 739 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 29 644 1.5E-266 T 09-03-2017 IPR022946 Uncharacterised protein family UPF0313 RG43_RS04155 fc2c0561729743e81bebacbedef44057 739 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 380 400 - T 09-03-2017 IPR020612 Methylthiotransferase, conserved site GO:0051539 RG43_RS04155 fc2c0561729743e81bebacbedef44057 739 Pfam PF11842 Domain of unknown function (DUF3362) 594 726 5.3E-45 T 09-03-2017 IPR024560 Uncharacterised protein family UPF0313, C-terminal RG43_RS16190 a32c23cc0d6ccbb5e17f484494775219 758 SMART SM00382 487 654 2.2E-6 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS16190 a32c23cc0d6ccbb5e17f484494775219 758 SMART SM00382 206 352 2.1E-13 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS16190 a32c23cc0d6ccbb5e17f484494775219 758 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 734 0.0 T 09-03-2017 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 RG43_RS16190 a32c23cc0d6ccbb5e17f484494775219 758 Gene3D G3DSA:3.40.50.300 442 663 3.3E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16190 a32c23cc0d6ccbb5e17f484494775219 758 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 211 342 4.9E-13 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 RG43_RS16190 a32c23cc0d6ccbb5e17f484494775219 758 SUPERFAMILY SSF52540 169 426 1.77E-68 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16190 a32c23cc0d6ccbb5e17f484494775219 758 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 518 536 - T 09-03-2017 IPR028299 ClpA/B, conserved site 2 RG43_RS16190 a32c23cc0d6ccbb5e17f484494775219 758 SMART SM01086 653 744 7.4E-36 T 09-03-2017 IPR019489 Clp ATPase, C-terminal RG43_RS16190 a32c23cc0d6ccbb5e17f484494775219 758 Gene3D G3DSA:1.10.8.60 664 754 2.2E-32 T 09-03-2017 RG43_RS16190 a32c23cc0d6ccbb5e17f484494775219 758 Pfam PF07724 AAA domain (Cdc48 subfamily) 486 647 1.8E-47 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 RG43_RS16190 a32c23cc0d6ccbb5e17f484494775219 758 Gene3D G3DSA:3.40.50.300 167 350 5.8E-42 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16190 a32c23cc0d6ccbb5e17f484494775219 758 Gene3D G3DSA:1.10.1780.10 1 141 1.4E-45 T 09-03-2017 IPR004176 Clp, N-terminal GO:0019538 RG43_RS16190 a32c23cc0d6ccbb5e17f484494775219 758 SUPERFAMILY SSF52540 437 748 9.85E-78 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16190 a32c23cc0d6ccbb5e17f484494775219 758 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 7.7E-15 T 09-03-2017 IPR004176 Clp, N-terminal GO:0019538 RG43_RS16190 a32c23cc0d6ccbb5e17f484494775219 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 533 551 1.2E-35 T 09-03-2017 IPR001270 ClpA/B family GO:0005524 RG43_RS16190 a32c23cc0d6ccbb5e17f484494775219 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 562 580 1.2E-35 T 09-03-2017 IPR001270 ClpA/B family GO:0005524 RG43_RS16190 a32c23cc0d6ccbb5e17f484494775219 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 595 609 1.2E-35 T 09-03-2017 IPR001270 ClpA/B family GO:0005524 RG43_RS16190 a32c23cc0d6ccbb5e17f484494775219 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 491 509 1.2E-35 T 09-03-2017 IPR001270 ClpA/B family GO:0005524 RG43_RS16190 a32c23cc0d6ccbb5e17f484494775219 758 Gene3D G3DSA:1.10.8.60 352 435 4.4E-30 T 09-03-2017 RG43_RS16190 a32c23cc0d6ccbb5e17f484494775219 758 SUPERFAMILY SSF81923 1 141 1.96E-58 T 09-03-2017 IPR004176 Clp, N-terminal GO:0019538 RG43_RS16190 a32c23cc0d6ccbb5e17f484494775219 758 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 302 314 - T 09-03-2017 IPR018368 ClpA/B, conserved site 1 GO:0005524 RG43_RS16190 a32c23cc0d6ccbb5e17f484494775219 758 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 653 733 7.1E-25 T 09-03-2017 IPR019489 Clp ATPase, C-terminal RG43_RS06285 e39d82d7397e3243bc37f99ee7d80380 255 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 131 147 - T 09-03-2017 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS06285 e39d82d7397e3243bc37f99ee7d80380 255 Gene3D G3DSA:3.40.50.700 37 160 1.5E-26 T 09-03-2017 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS06285 e39d82d7397e3243bc37f99ee7d80380 255 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 48 157 2.7E-23 T 09-03-2017 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS06285 e39d82d7397e3243bc37f99ee7d80380 255 SUPERFAMILY SSF56770 36 167 7.33E-50 T 09-03-2017 RG43_RS15180 d5bb5ca9c52fff494b56f4dc20ba61ee 260 Pfam PF00460 Flagella basal body rod protein 5 35 8.6E-14 T 09-03-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 RG43_RS15180 d5bb5ca9c52fff494b56f4dc20ba61ee 260 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 09-03-2017 IPR019776 Flagellar basal body rod protein, conserved site RG43_RS15180 d5bb5ca9c52fff494b56f4dc20ba61ee 260 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 183 260 1.2E-26 T 09-03-2017 IPR010930 Flagellar basal-body/hook protein, C-terminal domain RG43_RS15180 d5bb5ca9c52fff494b56f4dc20ba61ee 260 SUPERFAMILY SSF117143 93 222 9.94E-35 T 09-03-2017 RG43_RS15180 d5bb5ca9c52fff494b56f4dc20ba61ee 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 145 243 2.4E-29 T 09-03-2017 IPR020013 Fagellar hook-basal body protein, FlgE/F/G RG43_RS15180 d5bb5ca9c52fff494b56f4dc20ba61ee 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 136 9.5E-49 T 09-03-2017 IPR020013 Fagellar hook-basal body protein, FlgE/F/G RG43_RS15180 d5bb5ca9c52fff494b56f4dc20ba61ee 260 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 259 4.5E-117 T 09-03-2017 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 RG43_RS09325 b8eb9513285cf147df91665582be886a 272 SUPERFAMILY SSF51445 64 267 1.01E-53 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily RG43_RS09325 b8eb9513285cf147df91665582be886a 272 Gene3D G3DSA:3.20.20.80 65 267 1.2E-66 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RG43_RS09325 b8eb9513285cf147df91665582be886a 272 SMART SM00641 67 178 2.2E-45 T 09-03-2017 IPR018077 Glycoside hydrolase, family 25 subgroup RG43_RS09325 b8eb9513285cf147df91665582be886a 272 ProSitePatterns PS00953 Glycosyl hydrolases family 25 active sites signature. 71 109 - T 09-03-2017 IPR008270 Glycoside hydrolase, family 25, active site GO:0003796|GO:0009253|GO:0016998 RG43_RS09325 b8eb9513285cf147df91665582be886a 272 Pfam PF01183 Glycosyl hydrolases family 25 70 245 1.4E-54 T 09-03-2017 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 RG43_RS20430 f4cb0b584c2476872ffbe9ef7cf75bc6 251 Gene3D G3DSA:3.60.15.10 5 251 1.7E-85 T 09-03-2017 IPR001279 Metallo-beta-lactamase RG43_RS20430 f4cb0b584c2476872ffbe9ef7cf75bc6 251 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 166 251 3.3E-22 T 09-03-2017 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 RG43_RS20430 f4cb0b584c2476872ffbe9ef7cf75bc6 251 Pfam PF00753 Metallo-beta-lactamase superfamily 12 165 3.4E-22 T 09-03-2017 IPR001279 Metallo-beta-lactamase RG43_RS20430 f4cb0b584c2476872ffbe9ef7cf75bc6 251 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 251 9.2E-104 T 09-03-2017 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 RG43_RS20430 f4cb0b584c2476872ffbe9ef7cf75bc6 251 SUPERFAMILY SSF56281 1 251 9.43E-69 T 09-03-2017 IPR001279 Metallo-beta-lactamase RG43_RS20430 f4cb0b584c2476872ffbe9ef7cf75bc6 251 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 1 251 45.493 T 09-03-2017 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 RG43_RS20430 f4cb0b584c2476872ffbe9ef7cf75bc6 251 SMART SM00849 11 165 2.8E-38 T 09-03-2017 IPR001279 Metallo-beta-lactamase RG43_RS20430 f4cb0b584c2476872ffbe9ef7cf75bc6 251 PIRSF PIRSF005457 1 251 1.2E-90 T 09-03-2017 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 RG43_RS08155 d6474761a2d8f2787d17c08775c8d77c 406 Gene3D G3DSA:3.40.47.10 6 259 1.2E-54 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 RG43_RS08155 d6474761a2d8f2787d17c08775c8d77c 406 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 154 170 - T 09-03-2017 IPR018201 Beta-ketoacyl synthase, active site RG43_RS08155 d6474761a2d8f2787d17c08775c8d77c 406 SUPERFAMILY SSF53901 215 403 1.52E-60 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 RG43_RS08155 d6474761a2d8f2787d17c08775c8d77c 406 Gene3D G3DSA:3.40.47.10 263 404 4.1E-49 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 RG43_RS08155 d6474761a2d8f2787d17c08775c8d77c 406 SMART SM00825 Beta-ketoacyl synthase 4 406 7.9E-13 T 09-03-2017 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RG43_RS08155 d6474761a2d8f2787d17c08775c8d77c 406 SUPERFAMILY SSF53901 1 253 5.76E-64 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 RG43_RS08155 d6474761a2d8f2787d17c08775c8d77c 406 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 361 9.6E-30 T 09-03-2017 IPR014031 Beta-ketoacyl synthase, C-terminal RG43_RS08155 d6474761a2d8f2787d17c08775c8d77c 406 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 246 1.3E-39 T 09-03-2017 IPR014030 Beta-ketoacyl synthase, N-terminal RG43_RS00410 f5d284144ed328f8d6056c02018c88bb 772 SUPERFAMILY SSF74650 1 247 3.04E-67 T 09-03-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 RG43_RS00410 f5d284144ed328f8d6056c02018c88bb 772 SUPERFAMILY SSF117125 667 772 7.98E-36 T 09-03-2017 RG43_RS00410 f5d284144ed328f8d6056c02018c88bb 772 SUPERFAMILY SSF51011 586 665 6.4E-21 T 09-03-2017 RG43_RS00410 f5d284144ed328f8d6056c02018c88bb 772 Pfam PF13802 Galactose mutarotase-like 159 218 1.3E-15 T 09-03-2017 IPR025887 Glycoside hydrolase family 31, N-terminal domain RG43_RS00410 f5d284144ed328f8d6056c02018c88bb 772 SUPERFAMILY SSF51445 263 603 3.09E-90 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily RG43_RS00410 f5d284144ed328f8d6056c02018c88bb 772 Pfam PF01055 Glycosyl hydrolases family 31 240 666 1.5E-118 T 09-03-2017 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 RG43_RS00410 f5d284144ed328f8d6056c02018c88bb 772 Gene3D G3DSA:3.20.20.70 385 444 2.5E-12 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS00410 f5d284144ed328f8d6056c02018c88bb 772 Gene3D G3DSA:3.20.20.70 275 350 2.5E-12 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS02775 f0debbd46a6c19cf23afee6654caa236 310 Gene3D G3DSA:1.25.40.10 75 153 5.6E-4 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS02775 f0debbd46a6c19cf23afee6654caa236 310 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 289 3.8E-34 T 09-03-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RG43_RS02775 f0debbd46a6c19cf23afee6654caa236 310 Hamap MF_01544 p-hydroxybenzoic acid efflux pump subunit AaeA [aaeA]. 1 310 61.721 T 09-03-2017 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA RG43_RS02775 f0debbd46a6c19cf23afee6654caa236 310 Gene3D G3DSA:2.40.50.100 47 74 3.3E-19 T 09-03-2017 RG43_RS02775 f0debbd46a6c19cf23afee6654caa236 310 Gene3D G3DSA:2.40.50.100 154 188 3.3E-19 T 09-03-2017 RG43_RS02775 f0debbd46a6c19cf23afee6654caa236 310 SUPERFAMILY SSF111369 46 219 5.89E-24 T 09-03-2017 RG43_RS02775 f0debbd46a6c19cf23afee6654caa236 310 Pfam PF13533 Biotin-lipoyl like 47 95 2.0E-20 T 09-03-2017 RG43_RS02775 f0debbd46a6c19cf23afee6654caa236 310 Pfam PF13437 HlyD family secretion protein 156 239 4.9E-9 T 09-03-2017 RG43_RS14080 f872664edd8f8cfc0b1247218175132a 865 Pfam PF01751 Toprim domain 5 142 4.8E-34 T 09-03-2017 IPR006171 Toprim domain RG43_RS14080 f872664edd8f8cfc0b1247218175132a 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 106 119 2.4E-37 T 09-03-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RG43_RS14080 f872664edd8f8cfc0b1247218175132a 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 314 323 2.4E-37 T 09-03-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RG43_RS14080 f872664edd8f8cfc0b1247218175132a 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 490 504 2.4E-37 T 09-03-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RG43_RS14080 f872664edd8f8cfc0b1247218175132a 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 390 406 2.4E-37 T 09-03-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RG43_RS14080 f872664edd8f8cfc0b1247218175132a 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 191 209 2.4E-37 T 09-03-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RG43_RS14080 f872664edd8f8cfc0b1247218175132a 865 Gene3D G3DSA:3.30.65.10 745 806 1.5E-26 T 09-03-2017 RG43_RS14080 f872664edd8f8cfc0b1247218175132a 865 Gene3D G3DSA:3.30.65.10 588 629 5.1E-11 T 09-03-2017 RG43_RS14080 f872664edd8f8cfc0b1247218175132a 865 Gene3D G3DSA:3.30.65.10 708 743 1.7E-11 T 09-03-2017 RG43_RS14080 f872664edd8f8cfc0b1247218175132a 865 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 635 4.0E-269 T 09-03-2017 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 RG43_RS14080 f872664edd8f8cfc0b1247218175132a 865 Gene3D G3DSA:2.20.25.10 808 865 4.0E-33 T 09-03-2017 RG43_RS14080 f872664edd8f8cfc0b1247218175132a 865 SUPERFAMILY SSF57783 704 743 6.12E-7 T 09-03-2017 RG43_RS14080 f872664edd8f8cfc0b1247218175132a 865 SUPERFAMILY SSF57783 809 864 1.7E-23 T 09-03-2017 RG43_RS14080 f872664edd8f8cfc0b1247218175132a 865 SMART SM00436 133 221 1.2E-48 T 09-03-2017 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 RG43_RS14080 f872664edd8f8cfc0b1247218175132a 865 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 309 323 - T 09-03-2017 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 RG43_RS14080 f872664edd8f8cfc0b1247218175132a 865 SMART SM00437 272 527 1.3E-127 T 09-03-2017 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 RG43_RS14080 f872664edd8f8cfc0b1247218175132a 865 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 709 745 6.1E-12 T 09-03-2017 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 RG43_RS14080 f872664edd8f8cfc0b1247218175132a 865 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 597 622 7.2E-6 T 09-03-2017 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 RG43_RS14080 f872664edd8f8cfc0b1247218175132a 865 SUPERFAMILY SSF57783 744 807 1.87E-19 T 09-03-2017 RG43_RS14080 f872664edd8f8cfc0b1247218175132a 865 Gene3D G3DSA:2.70.20.10 213 333 2.1E-31 T 09-03-2017 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 RG43_RS14080 f872664edd8f8cfc0b1247218175132a 865 Gene3D G3DSA:2.70.20.10 338 473 4.0E-37 T 09-03-2017 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 RG43_RS14080 f872664edd8f8cfc0b1247218175132a 865 Gene3D G3DSA:1.10.460.10 474 578 1.2E-59 T 09-03-2017 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 RG43_RS14080 f872664edd8f8cfc0b1247218175132a 865 Gene3D G3DSA:1.10.460.10 660 666 1.2E-59 T 09-03-2017 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 RG43_RS14080 f872664edd8f8cfc0b1247218175132a 865 Gene3D G3DSA:1.10.460.10 164 211 1.2E-59 T 09-03-2017 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 RG43_RS14080 f872664edd8f8cfc0b1247218175132a 865 SMART SM00493 3 132 1.7E-35 T 09-03-2017 IPR006171 Toprim domain RG43_RS14080 f872664edd8f8cfc0b1247218175132a 865 Pfam PF01131 DNA topoisomerase 157 565 1.6E-128 T 09-03-2017 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 RG43_RS14080 f872664edd8f8cfc0b1247218175132a 865 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 723 55.16 T 09-03-2017 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 RG43_RS14080 f872664edd8f8cfc0b1247218175132a 865 Gene3D G3DSA:3.40.50.140 1 163 2.5E-59 T 09-03-2017 IPR006171 Toprim domain RG43_RS14080 f872664edd8f8cfc0b1247218175132a 865 SUPERFAMILY SSF56712 3 609 7.59E-208 T 09-03-2017 IPR023405 DNA topoisomerase, type IA, core domain RG43_RS14080 f872664edd8f8cfc0b1247218175132a 865 Pfam PF08272 Topoisomerase I zinc-ribbon-like 758 793 3.5E-12 T 09-03-2017 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 RG43_RS14080 f872664edd8f8cfc0b1247218175132a 865 Pfam PF08272 Topoisomerase I zinc-ribbon-like 824 862 1.2E-22 T 09-03-2017 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 RG43_RS10975 ab135cb26d10bb244edb045f00889a83 504 SUPERFAMILY SSF52540 6 230 3.59E-58 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS10975 ab135cb26d10bb244edb045f00889a83 504 Pfam PF00005 ABC transporter 275 427 9.8E-18 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS10975 ab135cb26d10bb244edb045f00889a83 504 Pfam PF00005 ABC transporter 23 172 1.3E-32 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS10975 ab135cb26d10bb244edb045f00889a83 504 Gene3D G3DSA:3.40.50.300 3 230 1.2E-61 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS10975 ab135cb26d10bb244edb045f00889a83 504 Gene3D G3DSA:3.40.50.300 274 491 6.1E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS10975 ab135cb26d10bb244edb045f00889a83 504 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS10975 ab135cb26d10bb244edb045f00889a83 504 SMART SM00382 32 220 2.3E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS10975 ab135cb26d10bb244edb045f00889a83 504 SMART SM00382 281 476 1.8E-5 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS10975 ab135cb26d10bb244edb045f00889a83 504 SUPERFAMILY SSF52540 274 484 2.0E-42 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS07670 b87677210c07fa6debc5c606c7c078b3 332 SUPERFAMILY SSF64383 196 329 3.92E-48 T 09-03-2017 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 RG43_RS07670 b87677210c07fa6debc5c606c7c078b3 332 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 197 332 5.0E-76 T 09-03-2017 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 RG43_RS07670 b87677210c07fa6debc5c606c7c078b3 332 Hamap MF_00509 Cell division protein ZipA [zipA]. 3 326 24.652 T 09-03-2017 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 RG43_RS07670 b87677210c07fa6debc5c606c7c078b3 332 Gene3D G3DSA:3.30.1400.10 194 329 4.2E-62 T 09-03-2017 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 RG43_RS07670 b87677210c07fa6debc5c606c7c078b3 332 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 198 321 2.7E-47 T 09-03-2017 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 RG43_RS07670 b87677210c07fa6debc5c606c7c078b3 332 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 4 324 2.5E-125 T 09-03-2017 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 RG43_RS07670 b87677210c07fa6debc5c606c7c078b3 332 SMART SM00771 195 324 5.6E-75 T 09-03-2017 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 RG43_RS24215 4b5457a72c36e9d3831b9ffececa19f2 815 Pfam PF10145 Phage-related minor tail protein 239 440 9.1E-39 T 09-03-2017 IPR010090 Phage tail tape measure protein RG43_RS24215 4b5457a72c36e9d3831b9ffececa19f2 815 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 199 549 2.8E-107 T 09-03-2017 IPR010090 Phage tail tape measure protein RG43_RS02265 d97d0bb0b8c4c3f565cdc0812427d908 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 61.095 T 09-03-2017 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RG43_RS02265 d97d0bb0b8c4c3f565cdc0812427d908 394 Gene3D G3DSA:2.40.30.10 209 298 2.7E-37 T 09-03-2017 RG43_RS02265 d97d0bb0b8c4c3f565cdc0812427d908 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.6E-14 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 RG43_RS02265 d97d0bb0b8c4c3f565cdc0812427d908 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 200 7.1E-58 T 09-03-2017 RG43_RS02265 d97d0bb0b8c4c3f565cdc0812427d908 394 Gene3D G3DSA:3.40.50.300 3 208 5.3E-68 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS02265 d97d0bb0b8c4c3f565cdc0812427d908 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 7.8E-18 T 09-03-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 RG43_RS02265 d97d0bb0b8c4c3f565cdc0812427d908 394 SUPERFAMILY SSF50465 298 393 2.76E-36 T 09-03-2017 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RG43_RS02265 d97d0bb0b8c4c3f565cdc0812427d908 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 1.0E-239 T 09-03-2017 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RG43_RS02265 d97d0bb0b8c4c3f565cdc0812427d908 394 SUPERFAMILY SSF50447 205 301 1.34E-30 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain RG43_RS02265 d97d0bb0b8c4c3f565cdc0812427d908 394 SUPERFAMILY SSF52540 6 219 1.94E-60 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS02265 d97d0bb0b8c4c3f565cdc0812427d908 394 Gene3D G3DSA:2.40.30.10 300 393 8.4E-47 T 09-03-2017 RG43_RS02265 d97d0bb0b8c4c3f565cdc0812427d908 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.5E-24 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RG43_RS02265 d97d0bb0b8c4c3f565cdc0812427d908 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.5E-24 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RG43_RS02265 d97d0bb0b8c4c3f565cdc0812427d908 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.5E-24 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RG43_RS02265 d97d0bb0b8c4c3f565cdc0812427d908 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.5E-24 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RG43_RS02265 d97d0bb0b8c4c3f565cdc0812427d908 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.5E-24 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RG43_RS02265 d97d0bb0b8c4c3f565cdc0812427d908 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 09-03-2017 IPR031157 Tr-type G domain, conserved site RG43_RS02265 d97d0bb0b8c4c3f565cdc0812427d908 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 9.5E-34 T 09-03-2017 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal RG43_RS10335 8937a209a55a674ccc880efe98e78abd 349 Pfam PF06147 Protein of unknown function (DUF968) 131 345 4.6E-78 T 09-03-2017 IPR010373 Protein of unknown function DUF968 RG43_RS10335 8937a209a55a674ccc880efe98e78abd 349 SMART SM00507 266 315 1.2E-4 T 09-03-2017 IPR003615 HNH nuclease RG43_RS19685 22f60bfa7aee19f4b411330b77aa4212 908 Gene3D G3DSA:2.160.20.20 354 535 1.5E-65 T 09-03-2017 IPR012332 P22 tailspike C-terminal domain-like RG43_RS19685 22f60bfa7aee19f4b411330b77aa4212 908 Gene3D G3DSA:2.160.20.20 640 901 1.5E-65 T 09-03-2017 IPR012332 P22 tailspike C-terminal domain-like RG43_RS19685 22f60bfa7aee19f4b411330b77aa4212 908 PRINTS PR00921 IgA-specific serine endopeptidase (S6) signature 63 83 5.4E-15 T 09-03-2017 IPR000710 Peptidase S6, IgA endopeptidase GO:0004252|GO:0006508 RG43_RS19685 22f60bfa7aee19f4b411330b77aa4212 908 PRINTS PR00921 IgA-specific serine endopeptidase (S6) signature 258 276 5.4E-15 T 09-03-2017 IPR000710 Peptidase S6, IgA endopeptidase GO:0004252|GO:0006508 RG43_RS19685 22f60bfa7aee19f4b411330b77aa4212 908 PRINTS PR00921 IgA-specific serine endopeptidase (S6) signature 618 640 5.4E-15 T 09-03-2017 IPR000710 Peptidase S6, IgA endopeptidase GO:0004252|GO:0006508 RG43_RS19685 22f60bfa7aee19f4b411330b77aa4212 908 PRINTS PR00921 IgA-specific serine endopeptidase (S6) signature 687 701 5.4E-15 T 09-03-2017 IPR000710 Peptidase S6, IgA endopeptidase GO:0004252|GO:0006508 RG43_RS19685 22f60bfa7aee19f4b411330b77aa4212 908 Pfam PF02395 Immunoglobulin A1 protease 54 802 1.1E-118 T 09-03-2017 IPR000710 Peptidase S6, IgA endopeptidase GO:0004252|GO:0006508 RG43_RS19685 22f60bfa7aee19f4b411330b77aa4212 908 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 24 3.9E-4 T 09-03-2017 IPR024973 ESPR domain RG43_RS19685 22f60bfa7aee19f4b411330b77aa4212 908 SUPERFAMILY SSF51126 394 521 7.22E-38 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor RG43_RS19685 22f60bfa7aee19f4b411330b77aa4212 908 SUPERFAMILY SSF51126 608 782 7.22E-38 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor RG43_RS19685 22f60bfa7aee19f4b411330b77aa4212 908 SUPERFAMILY SSF51126 746 901 5.96E-5 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor RG43_RS20660 f0974d30d7835f4b52b27c2f40e89ca4 241 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 8.7E-109 T 09-03-2017 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 RG43_RS20660 f0974d30d7835f4b52b27c2f40e89ca4 241 Gene3D G3DSA:3.40.50.10490 23 99 9.5E-68 T 09-03-2017 RG43_RS20660 f0974d30d7835f4b52b27c2f40e89ca4 241 Gene3D G3DSA:3.40.50.10490 158 236 9.5E-68 T 09-03-2017 RG43_RS20660 f0974d30d7835f4b52b27c2f40e89ca4 241 PRINTS PR00395 Ribosomal protein S2 signature 196 210 8.8E-38 T 09-03-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS20660 f0974d30d7835f4b52b27c2f40e89ca4 241 PRINTS PR00395 Ribosomal protein S2 signature 37 46 8.8E-38 T 09-03-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS20660 f0974d30d7835f4b52b27c2f40e89ca4 241 PRINTS PR00395 Ribosomal protein S2 signature 175 186 8.8E-38 T 09-03-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS20660 f0974d30d7835f4b52b27c2f40e89ca4 241 PRINTS PR00395 Ribosomal protein S2 signature 87 104 8.8E-38 T 09-03-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS20660 f0974d30d7835f4b52b27c2f40e89ca4 241 PRINTS PR00395 Ribosomal protein S2 signature 158 175 8.8E-38 T 09-03-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS20660 f0974d30d7835f4b52b27c2f40e89ca4 241 PRINTS PR00395 Ribosomal protein S2 signature 6 24 8.8E-38 T 09-03-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS20660 f0974d30d7835f4b52b27c2f40e89ca4 241 SUPERFAMILY SSF52313 6 235 1.96E-96 T 09-03-2017 IPR023591 Ribosomal protein S2, flavodoxin-like domain RG43_RS20660 f0974d30d7835f4b52b27c2f40e89ca4 241 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 09-03-2017 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 RG43_RS20660 f0974d30d7835f4b52b27c2f40e89ca4 241 Gene3D G3DSA:1.10.287.610 100 152 3.1E-27 T 09-03-2017 RG43_RS20660 f0974d30d7835f4b52b27c2f40e89ca4 241 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.418 T 09-03-2017 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 RG43_RS20660 f0974d30d7835f4b52b27c2f40e89ca4 241 Pfam PF00318 Ribosomal protein S2 9 224 3.7E-94 T 09-03-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS20660 f0974d30d7835f4b52b27c2f40e89ca4 241 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 09-03-2017 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 RG43_RS08085 2677c1b89dcdcacb774f28151c714387 879 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 319 329 - T 09-03-2017 IPR018030 Fimbrial membrane usher, conserved site RG43_RS08085 2677c1b89dcdcacb774f28151c714387 879 Pfam PF13954 PapC N-terminal domain 34 180 2.4E-35 T 09-03-2017 IPR025885 PapC, N-terminal domain GO:0005515 RG43_RS08085 2677c1b89dcdcacb774f28151c714387 879 Pfam PF13953 PapC C-terminal domain 766 825 1.0E-14 T 09-03-2017 IPR025949 PapC-like, C-terminal domain RG43_RS08085 2677c1b89dcdcacb774f28151c714387 879 Pfam PF00577 Outer membrane usher protein 196 757 2.5E-199 T 09-03-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 RG43_RS08085 2677c1b89dcdcacb774f28151c714387 879 SUPERFAMILY SSF141729 33 154 7.98E-28 T 09-03-2017 RG43_RS24795 c8dcbe6345c8c4f2c57af7b667629997 729 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 627 690 7.5E-6 T 09-03-2017 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 RG43_RS24795 c8dcbe6345c8c4f2c57af7b667629997 729 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 496 592 2.2E-26 T 09-03-2017 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 RG43_RS24795 c8dcbe6345c8c4f2c57af7b667629997 729 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 715 53.763 T 09-03-2017 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 RG43_RS24795 c8dcbe6345c8c4f2c57af7b667629997 729 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 09-03-2017 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 RG43_RS24795 c8dcbe6345c8c4f2c57af7b667629997 729 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 205 4.6E-37 T 09-03-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RG43_RS24795 c8dcbe6345c8c4f2c57af7b667629997 729 Gene3D G3DSA:1.10.1040.10 632 710 2.2E-17 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RG43_RS24795 c8dcbe6345c8c4f2c57af7b667629997 729 Gene3D G3DSA:1.10.1040.10 498 593 2.1E-21 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RG43_RS24795 c8dcbe6345c8c4f2c57af7b667629997 729 SUPERFAMILY SSF51735 314 495 3.56E-57 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS24795 c8dcbe6345c8c4f2c57af7b667629997 729 SUPERFAMILY SSF48179 622 714 2.98E-23 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RG43_RS24795 c8dcbe6345c8c4f2c57af7b667629997 729 Gene3D G3DSA:3.40.50.720 304 497 2.0E-63 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS24795 c8dcbe6345c8c4f2c57af7b667629997 729 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 316 494 2.3E-60 T 09-03-2017 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 RG43_RS24795 c8dcbe6345c8c4f2c57af7b667629997 729 SUPERFAMILY SSF52096 3 303 4.7E-68 T 09-03-2017 IPR029045 ClpP/crotonase-like domain RG43_RS24795 c8dcbe6345c8c4f2c57af7b667629997 729 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 714 0.0 T 09-03-2017 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 RG43_RS24795 c8dcbe6345c8c4f2c57af7b667629997 729 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 493 517 - T 09-03-2017 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 RG43_RS24795 c8dcbe6345c8c4f2c57af7b667629997 729 SUPERFAMILY SSF48179 495 610 2.3E-28 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RG43_RS24795 c8dcbe6345c8c4f2c57af7b667629997 729 Gene3D G3DSA:3.90.226.10 14 201 4.2E-59 T 09-03-2017 IPR029045 ClpP/crotonase-like domain RG43_RS24795 c8dcbe6345c8c4f2c57af7b667629997 729 Gene3D G3DSA:3.90.226.10 235 296 4.2E-59 T 09-03-2017 IPR029045 ClpP/crotonase-like domain RG43_RS08320 27b64aafa907f030e60924ca7eb51f22 610 Gene3D G3DSA:3.30.70.1450 232 311 7.4E-17 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RG43_RS08320 27b64aafa907f030e60924ca7eb51f22 610 Gene3D G3DSA:3.30.70.1450 322 395 8.3E-21 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RG43_RS08320 27b64aafa907f030e60924ca7eb51f22 610 SUPERFAMILY SSF116726 321 391 2.09E-16 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RG43_RS08320 27b64aafa907f030e60924ca7eb51f22 610 Pfam PF03600 Citrate transporter 16 197 1.4E-35 T 09-03-2017 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 RG43_RS08320 27b64aafa907f030e60924ca7eb51f22 610 Pfam PF03600 Citrate transporter 430 608 2.5E-19 T 09-03-2017 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 RG43_RS08320 27b64aafa907f030e60924ca7eb51f22 610 SUPERFAMILY SSF116726 231 292 2.62E-8 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RG43_RS08320 27b64aafa907f030e60924ca7eb51f22 610 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 558 574 - T 09-03-2017 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 RG43_RS08320 27b64aafa907f030e60924ca7eb51f22 610 Pfam PF02080 TrkA-C domain 326 390 2.1E-11 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RG43_RS08320 27b64aafa907f030e60924ca7eb51f22 610 Pfam PF02080 TrkA-C domain 231 304 6.5E-13 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RG43_RS13400 e7c400b81fd12ec608e7b3c877298621 145 Pfam PF01381 Helix-turn-helix 95 141 3.9E-7 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RG43_RS13400 e7c400b81fd12ec608e7b3c877298621 145 SMART SM00530 88 143 4.7E-4 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RG43_RS13400 e7c400b81fd12ec608e7b3c877298621 145 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 10 72 3.7E-7 T 09-03-2017 IPR031807 HicB-like antitoxin of toxin-antitoxin system RG43_RS13400 e7c400b81fd12ec608e7b3c877298621 145 SUPERFAMILY SSF47413 89 143 9.65E-6 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS13400 e7c400b81fd12ec608e7b3c877298621 145 Gene3D G3DSA:1.10.260.40 95 142 7.6E-6 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS13400 e7c400b81fd12ec608e7b3c877298621 145 SUPERFAMILY SSF143100 7 71 2.22E-16 T 09-03-2017 RG43_RS08660 8e8f1b678b8d4e519f7866bddd1ddaa5 220 SMART SM00882 5 216 2.2E-72 T 09-03-2017 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RG43_RS08660 8e8f1b678b8d4e519f7866bddd1ddaa5 220 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 6 217 3.4E-65 T 09-03-2017 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 RG43_RS08660 8e8f1b678b8d4e519f7866bddd1ddaa5 220 Pfam PF01144 Coenzyme A transferase 6 215 8.0E-71 T 09-03-2017 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RG43_RS08660 8e8f1b678b8d4e519f7866bddd1ddaa5 220 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 17 32 - T 09-03-2017 IPR004163 Coenzyme A transferase binding site GO:0008152|GO:0008410 RG43_RS08660 8e8f1b678b8d4e519f7866bddd1ddaa5 220 SUPERFAMILY SSF100950 2 217 1.07E-76 T 09-03-2017 RG43_RS08660 8e8f1b678b8d4e519f7866bddd1ddaa5 220 Gene3D G3DSA:3.40.1080.10 3 215 4.1E-78 T 09-03-2017 RG43_RS24485 1eea3a61dabb138633a9db0e91c13372 278 Gene3D G3DSA:1.10.10.60 224 272 1.2E-17 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS24485 1eea3a61dabb138633a9db0e91c13372 278 SUPERFAMILY SSF46689 171 221 5.38E-8 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS24485 1eea3a61dabb138633a9db0e91c13372 278 SUPERFAMILY SSF46689 223 272 5.38E-14 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS24485 1eea3a61dabb138633a9db0e91c13372 278 SUPERFAMILY SSF51215 15 158 1.96E-14 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RG43_RS24485 1eea3a61dabb138633a9db0e91c13372 278 Gene3D G3DSA:2.60.120.10 1 77 7.6E-12 T 09-03-2017 IPR014710 RmlC-like jelly roll fold RG43_RS24485 1eea3a61dabb138633a9db0e91c13372 278 Hamap MF_01534 HTH-type transcriptional activator RhaS [rhaS]. 1 273 53.318 T 09-03-2017 IPR023609 Transcription regulator HTH, RhaS GO:0003700|GO:0006355|GO:0019299 RG43_RS24485 1eea3a61dabb138633a9db0e91c13372 278 SMART SM00342 187 270 1.3E-33 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS24485 1eea3a61dabb138633a9db0e91c13372 278 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 224 266 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RG43_RS24485 1eea3a61dabb138633a9db0e91c13372 278 Gene3D G3DSA:1.10.10.60 168 223 6.8E-15 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS24485 1eea3a61dabb138633a9db0e91c13372 278 Pfam PF12833 Helix-turn-helix domain 194 271 2.0E-25 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS24485 1eea3a61dabb138633a9db0e91c13372 278 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 239 254 5.3E-6 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RG43_RS24485 1eea3a61dabb138633a9db0e91c13372 278 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 254 270 5.3E-6 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RG43_RS24485 1eea3a61dabb138633a9db0e91c13372 278 Pfam PF02311 AraC-like ligand binding domain 16 154 6.1E-24 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RG43_RS06890 b81a8841be34ad90cf46589e02b5db5e 226 SMART SM00358 156 224 9.1E-24 T 09-03-2017 IPR014720 Double-stranded RNA-binding domain RG43_RS06890 b81a8841be34ad90cf46589e02b5db5e 226 Gene3D G3DSA:3.30.160.20 153 223 8.7E-29 T 09-03-2017 IPR014720 Double-stranded RNA-binding domain RG43_RS06890 b81a8841be34ad90cf46589e02b5db5e 226 Hamap MF_00104 Ribonuclease 3 [rnc]. 9 220 29.49 T 09-03-2017 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 RG43_RS06890 b81a8841be34ad90cf46589e02b5db5e 226 Pfam PF14622 Ribonuclease-III-like 20 141 1.6E-33 T 09-03-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 RG43_RS06890 b81a8841be34ad90cf46589e02b5db5e 226 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 9 223 2.2E-74 T 09-03-2017 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 RG43_RS06890 b81a8841be34ad90cf46589e02b5db5e 226 Pfam PF00035 Double-stranded RNA binding motif 156 223 9.9E-15 T 09-03-2017 IPR014720 Double-stranded RNA-binding domain RG43_RS06890 b81a8841be34ad90cf46589e02b5db5e 226 SUPERFAMILY SSF54768 109 223 2.04E-27 T 09-03-2017 RG43_RS06890 b81a8841be34ad90cf46589e02b5db5e 226 ProSitePatterns PS00517 Ribonuclease III family signature. 38 46 - T 09-03-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 RG43_RS06890 b81a8841be34ad90cf46589e02b5db5e 226 SMART SM00535 21 149 9.5E-60 T 09-03-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 RG43_RS06890 b81a8841be34ad90cf46589e02b5db5e 226 SUPERFAMILY SSF69065 5 159 1.69E-50 T 09-03-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 RG43_RS06890 b81a8841be34ad90cf46589e02b5db5e 226 Gene3D G3DSA:1.10.1520.10 6 148 2.3E-48 T 09-03-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 RG43_RS06740 ea1d8ba0096ab6683e4be35d4ed33246 243 SUPERFAMILY SSF64438 4 242 1.25E-90 T 09-03-2017 IPR011324 Cytotoxic necrotizing factor-like, catalytic RG43_RS06740 ea1d8ba0096ab6683e4be35d4ed33246 243 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 25 242 4.6E-83 T 09-03-2017 IPR003730 Multi-copper polyphenol oxidoreductase, laccase RG43_RS06740 ea1d8ba0096ab6683e4be35d4ed33246 243 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 20 241 8.4E-79 T 09-03-2017 IPR003730 Multi-copper polyphenol oxidoreductase, laccase RG43_RS06740 ea1d8ba0096ab6683e4be35d4ed33246 243 Gene3D G3DSA:3.60.140.10 3 242 1.4E-98 T 09-03-2017 IPR003730 Multi-copper polyphenol oxidoreductase, laccase RG43_RS11300 4c6c5e36bbf7d7afd68e4f4d18083e45 603 SUPERFAMILY SSF143975 1 418 9.15E-147 T 09-03-2017 RG43_RS11300 4c6c5e36bbf7d7afd68e4f4d18083e45 603 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 2 602 0.0 T 09-03-2017 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 RG43_RS11300 4c6c5e36bbf7d7afd68e4f4d18083e45 603 SUPERFAMILY SSF52016 419 600 1.02E-57 T 09-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RG43_RS11300 4c6c5e36bbf7d7afd68e4f4d18083e45 603 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 505 516 - T 09-03-2017 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 RG43_RS11300 4c6c5e36bbf7d7afd68e4f4d18083e45 603 Pfam PF00920 Dehydratase family 66 598 1.4E-158 T 09-03-2017 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 RG43_RS11300 4c6c5e36bbf7d7afd68e4f4d18083e45 603 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 154 164 - T 09-03-2017 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 RG43_RS24800 4390cc984e4a4594442b3f79afa2b621 387 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 5.2E-146 T 09-03-2017 IPR002155 Thiolase GO:0008152|GO:0016747 RG43_RS24800 4390cc984e4a4594442b3f79afa2b621 387 Gene3D G3DSA:3.40.47.10 4 126 4.5E-64 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 RG43_RS24800 4390cc984e4a4594442b3f79afa2b621 387 Gene3D G3DSA:3.40.47.10 184 267 4.5E-64 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 RG43_RS24800 4390cc984e4a4594442b3f79afa2b621 387 SUPERFAMILY SSF53901 1 259 3.68E-79 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 RG43_RS24800 4390cc984e4a4594442b3f79afa2b621 387 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 09-03-2017 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 RG43_RS24800 4390cc984e4a4594442b3f79afa2b621 387 SUPERFAMILY SSF53901 262 386 1.17E-42 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 RG43_RS24800 4390cc984e4a4594442b3f79afa2b621 387 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 1 387 62.013 T 09-03-2017 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 RG43_RS24800 4390cc984e4a4594442b3f79afa2b621 387 Pfam PF02803 Thiolase, C-terminal domain 261 386 5.3E-50 T 09-03-2017 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RG43_RS24800 4390cc984e4a4594442b3f79afa2b621 387 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 09-03-2017 IPR020610 Thiolase, active site GO:0008152|GO:0016747 RG43_RS24800 4390cc984e4a4594442b3f79afa2b621 387 Pfam PF00108 Thiolase, N-terminal domain 4 254 6.1E-87 T 09-03-2017 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RG43_RS24800 4390cc984e4a4594442b3f79afa2b621 387 Gene3D G3DSA:3.40.47.10 143 183 6.3E-59 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 RG43_RS24800 4390cc984e4a4594442b3f79afa2b621 387 Gene3D G3DSA:3.40.47.10 268 386 6.3E-59 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 RG43_RS24800 4390cc984e4a4594442b3f79afa2b621 387 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 09-03-2017 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 RG43_RS24800 4390cc984e4a4594442b3f79afa2b621 387 PIRSF PIRSF000429 1 387 2.1E-131 T 09-03-2017 IPR002155 Thiolase GO:0008152|GO:0016747 RG43_RS24800 4390cc984e4a4594442b3f79afa2b621 387 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 3 387 5.7E-243 T 09-03-2017 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 RG43_RS08235 0d817bcea5c951d8879ac3703159cb22 228 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 8 114 7.9E-19 T 09-03-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RG43_RS08235 0d817bcea5c951d8879ac3703159cb22 228 Gene3D G3DSA:1.10.3720.10 8 219 8.0E-39 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS08235 0d817bcea5c951d8879ac3703159cb22 228 SUPERFAMILY SSF161098 7 205 8.5E-38 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS08235 0d817bcea5c951d8879ac3703159cb22 228 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 219 3.5E-23 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS08460 408edbe6eae1535ba47a54b1917c6206 320 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 306 3.6E-133 T 09-03-2017 RG43_RS08460 408edbe6eae1535ba47a54b1917c6206 320 SUPERFAMILY SSF51604 104 304 3.8E-50 T 09-03-2017 IPR029065 Enolase C-terminal domain-like RG43_RS08460 408edbe6eae1535ba47a54b1917c6206 320 SMART SM00922 114 209 6.3E-11 T 09-03-2017 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RG43_RS08460 408edbe6eae1535ba47a54b1917c6206 320 Gene3D G3DSA:3.30.390.10 1 125 7.9E-48 T 09-03-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RG43_RS08460 408edbe6eae1535ba47a54b1917c6206 320 Pfam PF13378 Enolase C-terminal domain-like 124 279 2.1E-16 T 09-03-2017 IPR029065 Enolase C-terminal domain-like RG43_RS08460 408edbe6eae1535ba47a54b1917c6206 320 SUPERFAMILY SSF54826 1 97 2.16E-29 T 09-03-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RG43_RS08460 408edbe6eae1535ba47a54b1917c6206 320 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 319 22.852 T 09-03-2017 IPR010196 o-succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RG43_RS08460 408edbe6eae1535ba47a54b1917c6206 320 Gene3D G3DSA:3.20.20.120 126 302 3.9E-36 T 09-03-2017 IPR029065 Enolase C-terminal domain-like RG43_RS21145 33ee5c7827cf4687d3786823d4b545b0 334 Gene3D G3DSA:3.40.50.2300 63 152 6.8E-29 T 09-03-2017 RG43_RS21145 33ee5c7827cf4687d3786823d4b545b0 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 09-03-2017 RG43_RS21145 33ee5c7827cf4687d3786823d4b545b0 334 Gene3D G3DSA:3.40.50.2300 156 329 1.4E-36 T 09-03-2017 RG43_RS21145 33ee5c7827cf4687d3786823d4b545b0 334 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 62 312 4.6E-14 T 09-03-2017 IPR001761 Periplasmic binding protein/LacI sugar binding domain RG43_RS21145 33ee5c7827cf4687d3786823d4b545b0 334 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 328 2.4E-156 T 09-03-2017 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 RG43_RS21145 33ee5c7827cf4687d3786823d4b545b0 334 SMART SM00354 1 73 7.4E-32 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS21145 33ee5c7827cf4687d3786823d4b545b0 334 SUPERFAMILY SSF53822 60 314 2.94E-42 T 09-03-2017 IPR028082 Periplasmic binding protein-like I RG43_RS21145 33ee5c7827cf4687d3786823d4b545b0 334 SUPERFAMILY SSF47413 2 58 9.57E-16 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS21145 33ee5c7827cf4687d3786823d4b545b0 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 50 6.6E-19 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS21145 33ee5c7827cf4687d3786823d4b545b0 334 Gene3D G3DSA:1.10.260.40 1 62 1.1E-24 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS13990 a5aeb89f79a4af5874180b9bc5f59035 644 SUPERFAMILY SSF50249 83 171 9.42E-32 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS13990 a5aeb89f79a4af5874180b9bc5f59035 644 SUPERFAMILY SSF50249 176 556 1.2E-116 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS13990 a5aeb89f79a4af5874180b9bc5f59035 644 Pfam PF00575 S1 RNA binding domain 559 636 2.2E-10 T 09-03-2017 IPR003029 S1 domain GO:0003676 RG43_RS13990 a5aeb89f79a4af5874180b9bc5f59035 644 SUPERFAMILY SSF50249 560 643 1.11E-18 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS13990 a5aeb89f79a4af5874180b9bc5f59035 644 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 643 1.3E-255 T 09-03-2017 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 RG43_RS13990 a5aeb89f79a4af5874180b9bc5f59035 644 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 642 0.0 T 09-03-2017 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 RG43_RS13990 a5aeb89f79a4af5874180b9bc5f59035 644 ProSitePatterns PS01175 Ribonuclease II family signature. 484 508 - T 09-03-2017 IPR022966 Ribonuclease II/R, conserved site RG43_RS13990 a5aeb89f79a4af5874180b9bc5f59035 644 Pfam PF08206 Ribonuclease B OB domain 24 80 2.4E-19 T 09-03-2017 IPR013223 Ribonuclease B, N-terminal OB domain RG43_RS13990 a5aeb89f79a4af5874180b9bc5f59035 644 SMART SM00357 23 79 1.7E-15 T 09-03-2017 IPR011129 Cold shock protein GO:0003676 RG43_RS13990 a5aeb89f79a4af5874180b9bc5f59035 644 SUPERFAMILY SSF50249 8 80 4.97E-16 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS13990 a5aeb89f79a4af5874180b9bc5f59035 644 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 643 45.256 T 09-03-2017 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 RG43_RS13990 a5aeb89f79a4af5874180b9bc5f59035 644 Pfam PF00773 RNB domain 189 516 4.4E-85 T 09-03-2017 RG43_RS13990 a5aeb89f79a4af5874180b9bc5f59035 644 SMART SM00955 189 517 1.7E-129 T 09-03-2017 RG43_RS11380 2ca9a6907d051efb9c32ddabbb00a8a2 76 Pfam PF06440 DNA polymerase III, theta subunit 4 71 5.1E-38 T 09-03-2017 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 RG43_RS11380 2ca9a6907d051efb9c32ddabbb00a8a2 76 Gene3D G3DSA:1.10.1110.10 1 76 4.4E-43 T 09-03-2017 IPR011325 DNA polymerase III-theta, core, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS11380 2ca9a6907d051efb9c32ddabbb00a8a2 76 SUPERFAMILY SSF46575 1 76 3.01E-35 T 09-03-2017 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 RG43_RS11380 2ca9a6907d051efb9c32ddabbb00a8a2 76 ProDom PD057609 DNA POLYMERASE THETA SUBUNIT TRANSFERASE III NUCLEOTIDYLTRANSFERASE III DNA-DIRECTED REPLICATION 1 76 8.0E-38 T 09-03-2017 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 RG43_RS18795 ce48f6ed2f5ed052d5b4c46400f3e1d6 784 TIGRFAM TIGR00763 lon: endopeptidase La 12 771 0.0 T 09-03-2017 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 RG43_RS18795 ce48f6ed2f5ed052d5b4c46400f3e1d6 784 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 570 772 1.1E-97 T 09-03-2017 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 RG43_RS18795 ce48f6ed2f5ed052d5b4c46400f3e1d6 784 SUPERFAMILY SSF52540 313 587 5.4E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS18795 ce48f6ed2f5ed052d5b4c46400f3e1d6 784 Hamap MF_01973 Lon protease [lon]. 11 772 72.577 T 09-03-2017 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 RG43_RS18795 ce48f6ed2f5ed052d5b4c46400f3e1d6 784 SUPERFAMILY SSF54211 595 771 1.1E-59 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold RG43_RS18795 ce48f6ed2f5ed052d5b4c46400f3e1d6 784 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 201 5.8E-43 T 09-03-2017 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 RG43_RS18795 ce48f6ed2f5ed052d5b4c46400f3e1d6 784 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 352 489 1.9E-17 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 RG43_RS18795 ce48f6ed2f5ed052d5b4c46400f3e1d6 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 356 375 7.1E-57 T 09-03-2017 RG43_RS18795 ce48f6ed2f5ed052d5b4c46400f3e1d6 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 595 611 7.1E-57 T 09-03-2017 RG43_RS18795 ce48f6ed2f5ed052d5b4c46400f3e1d6 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 673 692 7.1E-57 T 09-03-2017 RG43_RS18795 ce48f6ed2f5ed052d5b4c46400f3e1d6 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 703 722 7.1E-57 T 09-03-2017 RG43_RS18795 ce48f6ed2f5ed052d5b4c46400f3e1d6 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 726 744 7.1E-57 T 09-03-2017 RG43_RS18795 ce48f6ed2f5ed052d5b4c46400f3e1d6 784 Gene3D G3DSA:3.30.230.10 590 771 3.1E-77 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RG43_RS18795 ce48f6ed2f5ed052d5b4c46400f3e1d6 784 Gene3D G3DSA:1.10.8.60 500 584 4.4E-33 T 09-03-2017 RG43_RS18795 ce48f6ed2f5ed052d5b4c46400f3e1d6 784 PIRSF PIRSF001174 1 775 0.0 T 09-03-2017 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 RG43_RS18795 ce48f6ed2f5ed052d5b4c46400f3e1d6 784 Gene3D G3DSA:3.40.50.300 310 499 3.4E-33 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS18795 ce48f6ed2f5ed052d5b4c46400f3e1d6 784 SMART SM00464 10 202 3.9E-88 T 09-03-2017 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 RG43_RS18795 ce48f6ed2f5ed052d5b4c46400f3e1d6 784 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 676 684 - T 09-03-2017 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 RG43_RS18795 ce48f6ed2f5ed052d5b4c46400f3e1d6 784 SUPERFAMILY SSF88697 10 201 4.22E-52 T 09-03-2017 IPR015947 PUA-like domain RG43_RS18795 ce48f6ed2f5ed052d5b4c46400f3e1d6 784 SMART SM00382 348 492 4.9E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS25915 9d13308ae01faec70c49dfcc0e10afcb 73 Pfam PF06174 Protein of unknown function (DUF987) 1 65 1.4E-37 T 09-03-2017 IPR009329 Protein of unknown function DUF987 RG43_RS25915 9d13308ae01faec70c49dfcc0e10afcb 73 ProDom PD056719 YEET C0272 C4574 AEC74 ECS1404 C1284 INTERGENIC-REGION YKFH YPJJ 10 73 9.0E-33 T 09-03-2017 IPR009329 Protein of unknown function DUF987 RG43_RS26875 9d13308ae01faec70c49dfcc0e10afcb 73 Pfam PF06174 Protein of unknown function (DUF987) 1 65 1.4E-37 T 09-03-2017 IPR009329 Protein of unknown function DUF987 RG43_RS26875 9d13308ae01faec70c49dfcc0e10afcb 73 ProDom PD056719 YEET C0272 C4574 AEC74 ECS1404 C1284 INTERGENIC-REGION YKFH YPJJ 10 73 9.0E-33 T 09-03-2017 IPR009329 Protein of unknown function DUF987 RG43_RS00780 d38e52b7c658957a7e17cb7c0d89f99c 512 Gene3D G3DSA:3.40.605.10 22 298 1.2E-101 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RG43_RS00780 d38e52b7c658957a7e17cb7c0d89f99c 512 Gene3D G3DSA:3.40.309.10 299 476 1.5E-56 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RG43_RS00780 d38e52b7c658957a7e17cb7c0d89f99c 512 Pfam PF00171 Aldehyde dehydrogenase family 33 498 1.3E-164 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RG43_RS00780 d38e52b7c658957a7e17cb7c0d89f99c 512 SUPERFAMILY SSF53720 21 505 1.26E-161 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RG43_RS00780 d38e52b7c658957a7e17cb7c0d89f99c 512 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 267 274 - T 09-03-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RG43_RS00780 d38e52b7c658957a7e17cb7c0d89f99c 512 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 300 311 - T 09-03-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RG43_RS20065 45dc89e518990a2514446e1a07565ebb 261 Gene3D G3DSA:3.30.1330.60 116 222 7.0E-17 T 09-03-2017 IPR006665 OmpA-like domain RG43_RS20065 45dc89e518990a2514446e1a07565ebb 261 SUPERFAMILY SSF103088 106 222 3.01E-18 T 09-03-2017 IPR006665 OmpA-like domain RG43_RS20065 45dc89e518990a2514446e1a07565ebb 261 Pfam PF00691 OmpA family 120 212 1.4E-14 T 09-03-2017 IPR006665 OmpA-like domain RG43_RS15300 62c05450e50b7b4b1aa37acb078e6e6d 350 SUPERFAMILY SSF52821 115 271 1.31E-32 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS15300 62c05450e50b7b4b1aa37acb078e6e6d 350 Gene3D G3DSA:3.40.250.10 117 242 2.3E-37 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS15300 62c05450e50b7b4b1aa37acb078e6e6d 350 Pfam PF00581 Rhodanese-like domain 138 233 1.2E-13 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS15300 62c05450e50b7b4b1aa37acb078e6e6d 350 Pfam PF12368 Rhodanase C-terminal 246 307 9.9E-19 T 09-03-2017 IPR022111 Rhodanase, C-terminal RG43_RS15300 62c05450e50b7b4b1aa37acb078e6e6d 350 Hamap MF_00469 UPF0176 protein YceA [yceA]. 22 277 39.763 T 09-03-2017 IPR020936 Uncharacterised protein family UPF0176 RG43_RS15300 62c05450e50b7b4b1aa37acb078e6e6d 350 SMART SM00450 136 237 7.5E-25 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS13795 83c654ebfdfe5da77b081475115d7ab1 332 SMART SM00354 2 72 4.0E-33 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS13795 83c654ebfdfe5da77b081475115d7ab1 332 SUPERFAMILY SSF47413 2 57 1.75E-18 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS13795 83c654ebfdfe5da77b081475115d7ab1 332 Gene3D G3DSA:1.10.260.40 2 51 2.5E-25 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS13795 83c654ebfdfe5da77b081475115d7ab1 332 Gene3D G3DSA:3.40.50.2300 180 317 5.9E-34 T 09-03-2017 RG43_RS13795 83c654ebfdfe5da77b081475115d7ab1 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 1.1E-21 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS13795 83c654ebfdfe5da77b081475115d7ab1 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 9.1E-7 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS13795 83c654ebfdfe5da77b081475115d7ab1 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 9.1E-7 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS13795 83c654ebfdfe5da77b081475115d7ab1 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 09-03-2017 RG43_RS13795 83c654ebfdfe5da77b081475115d7ab1 332 SUPERFAMILY SSF53822 75 325 1.06E-59 T 09-03-2017 IPR028082 Periplasmic binding protein-like I RG43_RS13795 83c654ebfdfe5da77b081475115d7ab1 332 Gene3D G3DSA:3.40.50.2300 52 179 8.4E-31 T 09-03-2017 RG43_RS13795 83c654ebfdfe5da77b081475115d7ab1 332 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 77 323 4.2E-24 T 09-03-2017 IPR001761 Periplasmic binding protein/LacI sugar binding domain RG43_RS06190 11a77bc7d92221e101d8533885d87612 302 SUPERFAMILY SSF51735 7 169 1.46E-30 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS06190 11a77bc7d92221e101d8533885d87612 302 Gene3D G3DSA:1.10.1040.10 172 293 5.0E-45 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RG43_RS06190 11a77bc7d92221e101d8533885d87612 302 PIRSF PIRSF000103 1 296 3.1E-57 T 09-03-2017 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 RG43_RS06190 11a77bc7d92221e101d8533885d87612 302 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 9 166 4.5E-35 T 09-03-2017 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 RG43_RS06190 11a77bc7d92221e101d8533885d87612 302 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 172 291 7.7E-35 T 09-03-2017 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 RG43_RS06190 11a77bc7d92221e101d8533885d87612 302 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 11 24 - T 09-03-2017 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 RG43_RS06190 11a77bc7d92221e101d8533885d87612 302 Gene3D G3DSA:3.40.50.720 7 168 3.8E-38 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS06190 11a77bc7d92221e101d8533885d87612 302 SUPERFAMILY SSF48179 170 294 1.25E-37 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RG43_RS04505 409e23f9f907086f89bcf43d0c152d01 159 Pfam PF03230 Antirestriction protein 64 159 4.6E-36 T 09-03-2017 IPR004914 Antirestriction protein RG43_RS04505 409e23f9f907086f89bcf43d0c152d01 159 ProDom PD012854 PLASMID KLCA ANTIRESTRICTION YFJX YCIB ARDB STABLE YFEB Z1216 C0275 62 159 4.0E-54 T 09-03-2017 IPR004914 Antirestriction protein RG43_RS26885 409e23f9f907086f89bcf43d0c152d01 159 Pfam PF03230 Antirestriction protein 64 159 4.6E-36 T 09-03-2017 IPR004914 Antirestriction protein RG43_RS26885 409e23f9f907086f89bcf43d0c152d01 159 ProDom PD012854 PLASMID KLCA ANTIRESTRICTION YFJX YCIB ARDB STABLE YFEB Z1216 C0275 62 159 4.0E-54 T 09-03-2017 IPR004914 Antirestriction protein RG43_RS09600 1aafa12f2538373d8e7951fb49aa194e 456 Gene3D G3DSA:3.40.120.10 6 149 5.2E-36 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS09600 1aafa12f2538373d8e7951fb49aa194e 456 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 263 372 2.6E-26 T 09-03-2017 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS09600 1aafa12f2538373d8e7951fb49aa194e 456 SUPERFAMILY SSF53738 263 368 4.32E-34 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS09600 1aafa12f2538373d8e7951fb49aa194e 456 SUPERFAMILY SSF55957 374 456 7.67E-18 T 09-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS09600 1aafa12f2538373d8e7951fb49aa194e 456 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 7 131 6.3E-32 T 09-03-2017 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS09600 1aafa12f2538373d8e7951fb49aa194e 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 91 105 4.8E-32 T 09-03-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS09600 1aafa12f2538373d8e7951fb49aa194e 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 238 253 4.8E-32 T 09-03-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS09600 1aafa12f2538373d8e7951fb49aa194e 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 170 189 4.8E-32 T 09-03-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS09600 1aafa12f2538373d8e7951fb49aa194e 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 209 222 4.8E-32 T 09-03-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS09600 1aafa12f2538373d8e7951fb49aa194e 456 Gene3D G3DSA:3.40.120.10 255 368 1.1E-42 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS09600 1aafa12f2538373d8e7951fb49aa194e 456 SUPERFAMILY SSF53738 4 176 9.42E-39 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS09600 1aafa12f2538373d8e7951fb49aa194e 456 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 378 445 5.1E-9 T 09-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS09600 1aafa12f2538373d8e7951fb49aa194e 456 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 154 258 6.5E-22 T 09-03-2017 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS09600 1aafa12f2538373d8e7951fb49aa194e 456 Gene3D G3DSA:3.40.120.10 172 254 1.3E-27 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS09600 1aafa12f2538373d8e7951fb49aa194e 456 SUPERFAMILY SSF53738 153 261 3.92E-28 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS09600 1aafa12f2538373d8e7951fb49aa194e 456 Gene3D G3DSA:3.30.310.50 375 455 1.6E-17 T 09-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS09600 1aafa12f2538373d8e7951fb49aa194e 456 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 92 101 - T 09-03-2017 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS08890 ef7d9c33d2313303e2e34b1342ef1c63 529 Pfam PF00005 ABC transporter 26 184 3.1E-27 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS08890 ef7d9c33d2313303e2e34b1342ef1c63 529 Pfam PF00005 ABC transporter 302 454 2.1E-31 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS08890 ef7d9c33d2313303e2e34b1342ef1c63 529 SUPERFAMILY SSF52540 5 256 4.69E-65 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS08890 ef7d9c33d2313303e2e34b1342ef1c63 529 ProSitePatterns PS00211 ABC transporters family signature. 426 440 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS08890 ef7d9c33d2313303e2e34b1342ef1c63 529 SUPERFAMILY SSF52540 276 525 8.54E-66 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS08890 ef7d9c33d2313303e2e34b1342ef1c63 529 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS08890 ef7d9c33d2313303e2e34b1342ef1c63 529 SMART SM00382 311 502 6.1E-18 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS08890 ef7d9c33d2313303e2e34b1342ef1c63 529 SMART SM00382 34 306 2.4E-16 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS08890 ef7d9c33d2313303e2e34b1342ef1c63 529 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 505 526 0.38 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RG43_RS08890 ef7d9c33d2313303e2e34b1342ef1c63 529 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 265 5.4E-5 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RG43_RS08890 ef7d9c33d2313303e2e34b1342ef1c63 529 Gene3D G3DSA:3.40.50.300 4 258 1.6E-72 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS08890 ef7d9c33d2313303e2e34b1342ef1c63 529 Gene3D G3DSA:3.40.50.300 275 526 2.1E-77 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25100 89b6b1bea1dbce15f7c064326a4fb470 848 Pfam PF12633 Adenylate cyclase NT domain 5 200 5.8E-81 T 09-03-2017 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 RG43_RS25100 89b6b1bea1dbce15f7c064326a4fb470 848 ProSitePatterns PS01093 Adenylate cyclase class-I signature 2. 598 612 - T 09-03-2017 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 RG43_RS25100 89b6b1bea1dbce15f7c064326a4fb470 848 Pfam PF01295 Adenylate cyclase, class-I 228 825 2.5E-258 T 09-03-2017 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 RG43_RS25100 89b6b1bea1dbce15f7c064326a4fb470 848 ProSitePatterns PS01092 Adenylate cyclase class-I signature 1. 242 253 - T 09-03-2017 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 RG43_RS25100 89b6b1bea1dbce15f7c064326a4fb470 848 PIRSF PIRSF001444 1 847 0.0 T 09-03-2017 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 RG43_RS13520 da6bc7984340c433833b33ab1847227b 333 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 3 325 3.8E-135 T 09-03-2017 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS13520 da6bc7984340c433833b33ab1847227b 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 150 7.7E-53 T 09-03-2017 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS13520 da6bc7984340c433833b33ab1847227b 333 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 09-03-2017 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS13520 da6bc7984340c433833b33ab1847227b 333 SUPERFAMILY SSF51735 3 166 3.61E-59 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS13520 da6bc7984340c433833b33ab1847227b 333 Gene3D G3DSA:3.30.360.10 159 315 6.2E-65 T 09-03-2017 RG43_RS13520 da6bc7984340c433833b33ab1847227b 333 SUPERFAMILY SSF55347 150 314 7.44E-62 T 09-03-2017 RG43_RS13520 da6bc7984340c433833b33ab1847227b 333 PIRSF PIRSF000149 1 333 2.0E-120 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS13520 da6bc7984340c433833b33ab1847227b 333 SMART SM00846 2 150 1.5E-82 T 09-03-2017 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS13520 da6bc7984340c433833b33ab1847227b 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 266 281 4.2E-32 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS13520 da6bc7984340c433833b33ab1847227b 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 4.2E-32 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS13520 da6bc7984340c433833b33ab1847227b 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 4.2E-32 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS13520 da6bc7984340c433833b33ab1847227b 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 4.2E-32 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS13520 da6bc7984340c433833b33ab1847227b 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 4.2E-32 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS13520 da6bc7984340c433833b33ab1847227b 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 313 6.2E-61 T 09-03-2017 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS13520 da6bc7984340c433833b33ab1847227b 333 Gene3D G3DSA:3.40.50.720 2 158 4.9E-69 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS19540 4bb0607d58ccb37c4919a76527bc8679 441 Gene3D G3DSA:3.50.50.60 128 316 1.1E-49 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS19540 4bb0607d58ccb37c4919a76527bc8679 441 Gene3D G3DSA:3.50.50.60 2 127 2.5E-24 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS19540 4bb0607d58ccb37c4919a76527bc8679 441 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 328 434 4.6E-29 T 09-03-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RG43_RS19540 4bb0607d58ccb37c4919a76527bc8679 441 SUPERFAMILY SSF55424 324 437 1.89E-33 T 09-03-2017 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RG43_RS19540 4bb0607d58ccb37c4919a76527bc8679 441 Gene3D G3DSA:3.30.390.30 318 437 5.2E-36 T 09-03-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RG43_RS19540 4bb0607d58ccb37c4919a76527bc8679 441 PIRSF PIRSF000350 1 438 3.8E-94 T 09-03-2017 RG43_RS19540 4bb0607d58ccb37c4919a76527bc8679 441 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 09-03-2017 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 RG43_RS19540 4bb0607d58ccb37c4919a76527bc8679 441 SUPERFAMILY SSF51905 1 297 4.59E-51 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS19540 4bb0607d58ccb37c4919a76527bc8679 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 411 431 6.1E-49 T 09-03-2017 RG43_RS19540 4bb0607d58ccb37c4919a76527bc8679 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 244 258 6.1E-49 T 09-03-2017 RG43_RS19540 4bb0607d58ccb37c4919a76527bc8679 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 6.1E-49 T 09-03-2017 RG43_RS19540 4bb0607d58ccb37c4919a76527bc8679 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 160 185 6.1E-49 T 09-03-2017 RG43_RS19540 4bb0607d58ccb37c4919a76527bc8679 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 287 294 6.1E-49 T 09-03-2017 RG43_RS19540 4bb0607d58ccb37c4919a76527bc8679 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 123 132 6.1E-49 T 09-03-2017 RG43_RS19540 4bb0607d58ccb37c4919a76527bc8679 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 389 404 6.1E-49 T 09-03-2017 RG43_RS19540 4bb0607d58ccb37c4919a76527bc8679 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 324 345 6.1E-49 T 09-03-2017 RG43_RS19540 4bb0607d58ccb37c4919a76527bc8679 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 6.1E-49 T 09-03-2017 RG43_RS19540 4bb0607d58ccb37c4919a76527bc8679 441 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 297 4.5E-58 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS19540 4bb0607d58ccb37c4919a76527bc8679 441 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 120 138 2.7E-27 T 09-03-2017 RG43_RS19540 4bb0607d58ccb37c4919a76527bc8679 441 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 2.7E-27 T 09-03-2017 RG43_RS19540 4bb0607d58ccb37c4919a76527bc8679 441 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 272 294 2.7E-27 T 09-03-2017 RG43_RS19540 4bb0607d58ccb37c4919a76527bc8679 441 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 160 178 2.7E-27 T 09-03-2017 RG43_RS19540 4bb0607d58ccb37c4919a76527bc8679 441 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 243 259 2.7E-27 T 09-03-2017 RG43_RS18950 6f0f70b2ec5ace4d18481c7117b55854 323 SUPERFAMILY SSF82866 79 303 6.41E-39 T 09-03-2017 RG43_RS18950 6f0f70b2ec5ace4d18481c7117b55854 323 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 125 289 2.5E-54 T 09-03-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RG43_RS18950 6f0f70b2ec5ace4d18481c7117b55854 323 PRINTS PR01755 Bacterial translocase SecF protein signature 44 59 1.3E-30 T 09-03-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RG43_RS18950 6f0f70b2ec5ace4d18481c7117b55854 323 PRINTS PR01755 Bacterial translocase SecF protein signature 208 226 1.3E-30 T 09-03-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RG43_RS18950 6f0f70b2ec5ace4d18481c7117b55854 323 PRINTS PR01755 Bacterial translocase SecF protein signature 160 174 1.3E-30 T 09-03-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RG43_RS18950 6f0f70b2ec5ace4d18481c7117b55854 323 PRINTS PR01755 Bacterial translocase SecF protein signature 240 255 1.3E-30 T 09-03-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RG43_RS18950 6f0f70b2ec5ace4d18481c7117b55854 323 Gene3D G3DSA:1.20.1640.10 140 305 4.6E-24 T 09-03-2017 RG43_RS18950 6f0f70b2ec5ace4d18481c7117b55854 323 Pfam PF07549 SecD/SecF GG Motif 39 66 1.5E-11 T 09-03-2017 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site RG43_RS18950 6f0f70b2ec5ace4d18481c7117b55854 323 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 17 303 28.189 T 09-03-2017 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 RG43_RS18950 6f0f70b2ec5ace4d18481c7117b55854 323 Pfam PF02355 Protein export membrane protein 117 301 1.8E-69 T 09-03-2017 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RG43_RS18950 6f0f70b2ec5ace4d18481c7117b55854 323 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 45 292 1.9E-87 T 09-03-2017 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 RG43_RS06175 fd29cc0809b921820eb5e4f317b3baa5 258 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 1.2E-34 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain RG43_RS06175 fd29cc0809b921820eb5e4f317b3baa5 258 PIRSF PIRSF006241 1 258 1.2E-87 T 09-03-2017 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 RG43_RS06175 fd29cc0809b921820eb5e4f317b3baa5 258 SUPERFAMILY SSF51658 1 256 9.69E-85 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain RG43_RS06175 fd29cc0809b921820eb5e4f317b3baa5 258 Gene3D G3DSA:3.20.20.150 1 257 2.9E-89 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain RG43_RS02455 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 SUPERFAMILY SSF103491 16 424 4.18E-134 T 09-03-2017 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 RG43_RS02455 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 09-03-2017 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 RG43_RS02455 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 429 1.3E-141 T 09-03-2017 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 RG43_RS02455 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 PIRSF PIRSF004557 11 441 4.2E-124 T 09-03-2017 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 RG43_RS02455 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 ProSitePatterns PS00756 Protein secY signature 2. 173 190 - T 09-03-2017 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 RG43_RS02455 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 Pfam PF00344 SecY translocase 76 417 4.9E-120 T 09-03-2017 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 RG43_RS02455 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 Gene3D G3DSA:1.10.3370.10 17 437 1.5E-167 T 09-03-2017 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 RG43_RS02455 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 Hamap MF_01465 Protein translocase subunit SecY [secY]. 10 433 30.039 T 09-03-2017 IPR026593 Protein translocase subunit SecY RG43_RS02455 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 370 388 7.7E-99 T 09-03-2017 RG43_RS02455 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 180 203 7.7E-99 T 09-03-2017 RG43_RS02455 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 315 337 7.7E-99 T 09-03-2017 RG43_RS02455 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 402 420 7.7E-99 T 09-03-2017 RG43_RS02455 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 154 179 7.7E-99 T 09-03-2017 RG43_RS02455 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 7.7E-99 T 09-03-2017 RG43_RS02455 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 7.7E-99 T 09-03-2017 RG43_RS02455 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 7.7E-99 T 09-03-2017 RG43_RS02455 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 272 291 7.7E-99 T 09-03-2017 RG43_RS09965 3a2ab54b9a87170d6d4e43468bbce780 68 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 13 59 3.2E-6 T 09-03-2017 IPR010260 Prophage CP4-57 regulatory protein (AlpA) RG43_RS09965 3a2ab54b9a87170d6d4e43468bbce780 68 Gene3D G3DSA:1.10.10.10 12 65 2.1E-4 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS02480 456bfd9236c5cfd90803aed14a8ec2d0 329 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 256 329 2.0E-36 T 09-03-2017 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RG43_RS02480 456bfd9236c5cfd90803aed14a8ec2d0 329 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 245 308 6.0E-24 T 09-03-2017 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RG43_RS02480 456bfd9236c5cfd90803aed14a8ec2d0 329 Gene3D G3DSA:1.10.150.20 244 328 6.1E-38 T 09-03-2017 RG43_RS02480 456bfd9236c5cfd90803aed14a8ec2d0 329 SUPERFAMILY SSF47789 251 325 1.27E-25 T 09-03-2017 RG43_RS02480 456bfd9236c5cfd90803aed14a8ec2d0 329 SUPERFAMILY SSF56553 53 178 1.45E-41 T 09-03-2017 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RG43_RS02480 456bfd9236c5cfd90803aed14a8ec2d0 329 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 156 1.6E-23 T 09-03-2017 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RG43_RS02480 456bfd9236c5cfd90803aed14a8ec2d0 329 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 317 34.651 T 09-03-2017 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RG43_RS02480 456bfd9236c5cfd90803aed14a8ec2d0 329 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 228 3.9E-24 T 09-03-2017 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RG43_RS02480 456bfd9236c5cfd90803aed14a8ec2d0 329 Gene3D G3DSA:3.30.1360.10 9 57 1.5E-10 T 09-03-2017 RG43_RS02480 456bfd9236c5cfd90803aed14a8ec2d0 329 SMART SM00662 23 234 3.0E-105 T 09-03-2017 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RG43_RS02480 456bfd9236c5cfd90803aed14a8ec2d0 329 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 316 4.3E-113 T 09-03-2017 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RG43_RS02480 456bfd9236c5cfd90803aed14a8ec2d0 329 SUPERFAMILY SSF55257 179 231 1.57E-30 T 09-03-2017 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RG43_RS02480 456bfd9236c5cfd90803aed14a8ec2d0 329 SUPERFAMILY SSF55257 6 53 1.57E-30 T 09-03-2017 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RG43_RS02480 456bfd9236c5cfd90803aed14a8ec2d0 329 Gene3D G3DSA:2.170.120.12 58 177 5.0E-40 T 09-03-2017 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RG43_RS18805 c80cda9efd4d78c152403bd0ab9e6143 207 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 09-03-2017 IPR033135 ClpP, histidine active site RG43_RS18805 c80cda9efd4d78c152403bd0ab9e6143 207 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 14 205 7.2E-112 T 09-03-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RG43_RS18805 c80cda9efd4d78c152403bd0ab9e6143 207 SUPERFAMILY SSF52096 23 206 1.77E-75 T 09-03-2017 IPR029045 ClpP/crotonase-like domain RG43_RS18805 c80cda9efd4d78c152403bd0ab9e6143 207 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 44.936 T 09-03-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RG43_RS18805 c80cda9efd4d78c152403bd0ab9e6143 207 Gene3D G3DSA:3.90.226.10 16 205 7.0E-91 T 09-03-2017 IPR029045 ClpP/crotonase-like domain RG43_RS18805 c80cda9efd4d78c152403bd0ab9e6143 207 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 2.2E-54 T 09-03-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RG43_RS18805 c80cda9efd4d78c152403bd0ab9e6143 207 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 2.2E-54 T 09-03-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RG43_RS18805 c80cda9efd4d78c152403bd0ab9e6143 207 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 2.2E-54 T 09-03-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RG43_RS18805 c80cda9efd4d78c152403bd0ab9e6143 207 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 2.2E-54 T 09-03-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RG43_RS18805 c80cda9efd4d78c152403bd0ab9e6143 207 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 2.2E-54 T 09-03-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RG43_RS18805 c80cda9efd4d78c152403bd0ab9e6143 207 Pfam PF00574 Clp protease 25 205 5.2E-89 T 09-03-2017 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA RG43_RS18805 c80cda9efd4d78c152403bd0ab9e6143 207 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 09-03-2017 IPR018215 ClpP, Ser active site RG43_RS23275 57deaec7395b1408b84b94c3cb5def1d 652 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 09-03-2017 IPR020845 AMP-binding, conserved site RG43_RS23275 57deaec7395b1408b84b94c3cb5def1d 652 Pfam PF00501 AMP-binding enzyme 83 522 5.6E-93 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RG43_RS23275 57deaec7395b1408b84b94c3cb5def1d 652 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 2.2E-19 T 09-03-2017 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 RG43_RS23275 57deaec7395b1408b84b94c3cb5def1d 652 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 645 53.352 T 09-03-2017 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: R-HSA-71384 RG43_RS23275 57deaec7395b1408b84b94c3cb5def1d 652 Gene3D G3DSA:3.40.50.980 267 424 4.9E-28 T 09-03-2017 RG43_RS23275 57deaec7395b1408b84b94c3cb5def1d 652 Gene3D G3DSA:3.30.300.30 518 637 6.0E-30 T 09-03-2017 RG43_RS23275 57deaec7395b1408b84b94c3cb5def1d 652 Gene3D G3DSA:2.30.38.10 439 515 3.4E-8 T 09-03-2017 RG43_RS23275 57deaec7395b1408b84b94c3cb5def1d 652 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 643 0.0 T 09-03-2017 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: R-HSA-71384 RG43_RS23275 57deaec7395b1408b84b94c3cb5def1d 652 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 2.7E-26 T 09-03-2017 IPR025110 AMP-binding enzyme C-terminal domain RG43_RS23275 57deaec7395b1408b84b94c3cb5def1d 652 Gene3D G3DSA:3.40.50.980 79 266 1.6E-45 T 09-03-2017 RG43_RS23275 57deaec7395b1408b84b94c3cb5def1d 652 SUPERFAMILY SSF56801 11 643 4.06E-192 T 09-03-2017 RG43_RS20915 e36c6bfdb9a8287462487be5fe326485 516 SUPERFAMILY SSF49503 32 167 1.56E-31 T 09-03-2017 IPR008972 Cupredoxin RG43_RS20915 e36c6bfdb9a8287462487be5fe326485 516 SUPERFAMILY SSF49503 374 395 1.8E-32 T 09-03-2017 IPR008972 Cupredoxin RG43_RS20915 e36c6bfdb9a8287462487be5fe326485 516 SUPERFAMILY SSF49503 172 288 1.8E-32 T 09-03-2017 IPR008972 Cupredoxin RG43_RS20915 e36c6bfdb9a8287462487be5fe326485 516 Gene3D G3DSA:2.60.40.420 171 321 1.4E-31 T 09-03-2017 IPR008972 Cupredoxin RG43_RS20915 e36c6bfdb9a8287462487be5fe326485 516 SUPERFAMILY SSF49503 348 516 2.57E-31 T 09-03-2017 IPR008972 Cupredoxin RG43_RS20915 e36c6bfdb9a8287462487be5fe326485 516 Gene3D G3DSA:2.60.40.420 352 516 2.2E-31 T 09-03-2017 IPR008972 Cupredoxin RG43_RS20915 e36c6bfdb9a8287462487be5fe326485 516 Pfam PF07732 Multicopper oxidase 55 165 2.7E-31 T 09-03-2017 IPR011707 Multicopper oxidase, type 3 GO:0005507 RG43_RS20915 e36c6bfdb9a8287462487be5fe326485 516 Pfam PF07731 Multicopper oxidase 402 516 6.4E-24 T 09-03-2017 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 RG43_RS20915 e36c6bfdb9a8287462487be5fe326485 516 ProSitePatterns PS00080 Multicopper oxidases signature 2. 499 510 - T 09-03-2017 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 RG43_RS20915 e36c6bfdb9a8287462487be5fe326485 516 Gene3D G3DSA:2.60.40.420 33 170 3.7E-34 T 09-03-2017 IPR008972 Cupredoxin RG43_RS20915 e36c6bfdb9a8287462487be5fe326485 516 Pfam PF00394 Multicopper oxidase 227 290 1.5E-5 T 09-03-2017 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 RG43_RS01490 b7eeb98aca929a04e85c70464aafedee 268 TIGRFAM TIGR02769 nickel_nikE: nickel import ATP-binding protein NikE 2 265 1.5E-134 T 09-03-2017 IPR014137 Nickel import ATP-binding protein NikE GO:0005886|GO:0015413|GO:0015675|GO:0016151 RG43_RS01490 b7eeb98aca929a04e85c70464aafedee 268 Pfam PF00005 ABC transporter 28 179 2.1E-38 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS01490 b7eeb98aca929a04e85c70464aafedee 268 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS01490 b7eeb98aca929a04e85c70464aafedee 268 SUPERFAMILY SSF52540 5 237 2.43E-65 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS01490 b7eeb98aca929a04e85c70464aafedee 268 Gene3D G3DSA:3.40.50.300 2 234 3.4E-75 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS01490 b7eeb98aca929a04e85c70464aafedee 268 SMART SM00382 37 229 2.0E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS11195 230642690b04afa2708dfed50ddc19cd 507 Pfam PF07508 Recombinase 190 276 6.5E-13 T 09-03-2017 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 RG43_RS11195 230642690b04afa2708dfed50ddc19cd 507 SUPERFAMILY SSF53041 2 161 4.45E-17 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RG43_RS11195 230642690b04afa2708dfed50ddc19cd 507 Gene3D G3DSA:3.40.50.1390 3 123 2.3E-14 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RG43_RS11195 230642690b04afa2708dfed50ddc19cd 507 Pfam PF00239 Resolvase, N terminal domain 4 164 1.8E-21 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RG43_RS11195 230642690b04afa2708dfed50ddc19cd 507 ProSitePatterns PS00398 Site-specific recombinases signature 2. 78 90 - T 09-03-2017 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 RG43_RS11195 230642690b04afa2708dfed50ddc19cd 507 Pfam PF13408 Recombinase zinc beta ribbon domain 296 350 5.0E-6 T 09-03-2017 IPR025827 Recombinase zinc beta ribbon domain RG43_RS11195 230642690b04afa2708dfed50ddc19cd 507 SMART SM00857 4 165 4.6E-25 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RG43_RS21425 9b645bb4da5c24a326dc2063b5c3faf4 149 Gene3D G3DSA:3.10.50.40 130 145 4.7E-20 T 09-03-2017 RG43_RS21425 9b645bb4da5c24a326dc2063b5c3faf4 149 Gene3D G3DSA:3.10.50.40 3 80 4.7E-20 T 09-03-2017 RG43_RS21425 9b645bb4da5c24a326dc2063b5c3faf4 149 SUPERFAMILY SSF54534 5 143 7.66E-37 T 09-03-2017 RG43_RS21425 9b645bb4da5c24a326dc2063b5c3faf4 149 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 141 2.2E-15 T 09-03-2017 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 RG43_RS08580 d7554b3557836606cd6d719af3ee5356 216 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 11 213 5.3E-72 T 09-03-2017 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 Reactome: R-HSA-6782315|Reactome: R-HSA-6804756 RG43_RS08580 d7554b3557836606cd6d719af3ee5356 216 SUPERFAMILY SSF56112 37 179 3.31E-7 T 09-03-2017 IPR011009 Protein kinase-like domain RG43_RS08580 d7554b3557836606cd6d719af3ee5356 216 PIRSF PIRSF026326 1 216 2.1E-62 T 09-03-2017 IPR027023 Putative lipopolysaccharide kinase InaA RG43_RS10320 a9331941e77f02bd81c7c79979ec029b 70 ProSitePatterns PS00556 Hok/gef family cell toxic proteins signature. 30 49 - T 09-03-2017 IPR018084 Hok/gef cell toxic protein, conserved site GO:0016020 RG43_RS10320 a9331941e77f02bd81c7c79979ec029b 70 PRINTS PR00281 Hok/Gef cell toxic protein family signature 25 43 8.0E-15 T 09-03-2017 IPR000021 Hok/gef cell toxic protein GO:0016020 RG43_RS10320 a9331941e77f02bd81c7c79979ec029b 70 PRINTS PR00281 Hok/Gef cell toxic protein family signature 45 67 8.0E-15 T 09-03-2017 IPR000021 Hok/gef cell toxic protein GO:0016020 RG43_RS10320 a9331941e77f02bd81c7c79979ec029b 70 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 31 67 7.0E-6 T 09-03-2017 IPR000021 Hok/gef cell toxic protein GO:0016020 RG43_RS10320 a9331941e77f02bd81c7c79979ec029b 70 Pfam PF01848 Hok/gef family 25 66 1.8E-20 T 09-03-2017 IPR000021 Hok/gef cell toxic protein GO:0016020 RG43_RS21305 f876d603c8979cbd44c52f0461084097 282 Pfam PF00149 Calcineurin-like phosphoesterase 4 147 3.8E-14 T 09-03-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RG43_RS21305 f876d603c8979cbd44c52f0461084097 282 PIRSF PIRSF000903 1 275 1.2E-125 T 09-03-2017 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 RG43_RS21305 f876d603c8979cbd44c52f0461084097 282 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 278 3.8E-168 T 09-03-2017 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 RG43_RS21305 f876d603c8979cbd44c52f0461084097 282 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 271 52.778 T 09-03-2017 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 RG43_RS21305 f876d603c8979cbd44c52f0461084097 282 SUPERFAMILY SSF56300 1 259 5.47E-57 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like RG43_RS21305 f876d603c8979cbd44c52f0461084097 282 Gene3D G3DSA:3.60.21.10 1 132 3.5E-55 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like RG43_RS21305 f876d603c8979cbd44c52f0461084097 282 Gene3D G3DSA:3.60.21.10 169 267 3.5E-55 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like RG43_RS18430 1d46f1a2f2ddb83eab40ce091ccca85a 271 Pfam PF09339 IclR helix-turn-helix domain 23 73 6.5E-12 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RG43_RS18430 1d46f1a2f2ddb83eab40ce091ccca85a 271 SMART SM00346 21 111 3.0E-35 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RG43_RS18430 1d46f1a2f2ddb83eab40ce091ccca85a 271 SUPERFAMILY SSF46785 22 94 9.89E-13 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS18430 1d46f1a2f2ddb83eab40ce091ccca85a 271 Gene3D G3DSA:3.30.450.40 93 267 4.9E-53 T 09-03-2017 IPR029016 GAF domain-like RG43_RS18430 1d46f1a2f2ddb83eab40ce091ccca85a 271 SUPERFAMILY SSF55781 86 266 1.9E-48 T 09-03-2017 IPR029016 GAF domain-like RG43_RS18430 1d46f1a2f2ddb83eab40ce091ccca85a 271 Pfam PF01614 Bacterial transcriptional regulator 141 263 2.4E-41 T 09-03-2017 IPR014757 Transcription regulator IclR, C-terminal RG43_RS18430 1d46f1a2f2ddb83eab40ce091ccca85a 271 Gene3D G3DSA:1.10.10.10 19 92 5.7E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS21665 a242d4396e74bb7b4ceb01283ee061b6 440 SUPERFAMILY SSF52418 74 334 1.05E-88 T 09-03-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RG43_RS21665 a242d4396e74bb7b4ceb01283ee061b6 440 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 09-03-2017 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RG43_RS21665 a242d4396e74bb7b4ceb01283ee061b6 440 Hamap MF_01628 Thymidine phosphorylase [deoA]. 1 439 54.621 T 09-03-2017 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 RG43_RS21665 a242d4396e74bb7b4ceb01283ee061b6 440 SUPERFAMILY SSF54680 337 438 2.88E-33 T 09-03-2017 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RG43_RS21665 a242d4396e74bb7b4ceb01283ee061b6 440 Pfam PF00591 Glycosyl transferase family, a/b domain 79 309 2.0E-53 T 09-03-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RG43_RS21665 a242d4396e74bb7b4ceb01283ee061b6 440 PIRSF PIRSF000478 1 439 1.3E-154 T 09-03-2017 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RG43_RS21665 a242d4396e74bb7b4ceb01283ee061b6 440 SUPERFAMILY SSF47648 3 70 1.31E-21 T 09-03-2017 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 RG43_RS21665 a242d4396e74bb7b4ceb01283ee061b6 440 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 423 4.1E-171 T 09-03-2017 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 RG43_RS21665 a242d4396e74bb7b4ceb01283ee061b6 440 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 9.8E-19 T 09-03-2017 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 RG43_RS21665 a242d4396e74bb7b4ceb01283ee061b6 440 Gene3D G3DSA:3.90.1170.30 338 432 2.2E-37 T 09-03-2017 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RG43_RS21665 a242d4396e74bb7b4ceb01283ee061b6 440 SMART SM00941 350 424 1.6E-30 T 09-03-2017 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RG43_RS21665 a242d4396e74bb7b4ceb01283ee061b6 440 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 2 438 3.6E-238 T 09-03-2017 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 RG43_RS21665 a242d4396e74bb7b4ceb01283ee061b6 440 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 350 423 7.7E-26 T 09-03-2017 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RG43_RS21665 a242d4396e74bb7b4ceb01283ee061b6 440 Gene3D G3DSA:1.20.970.10 2 68 6.5E-30 T 09-03-2017 RG43_RS21665 a242d4396e74bb7b4ceb01283ee061b6 440 Gene3D G3DSA:3.40.1030.10 75 337 5.4E-111 T 09-03-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RG43_RS06365 38defd9fb751e2ec03f2e8c87ad55a28 319 TIGRFAM TIGR00825 EIIBC-GUT: PTS system, glucitol/sorbitol-specific, IIBC component 3 319 3.7E-189 T 09-03-2017 IPR004702 Phosphotransferease, sorbitol phosphotransferase enzyme II GO:0008982|GO:0009401|GO:0016021 RG43_RS06365 38defd9fb751e2ec03f2e8c87ad55a28 319 Pfam PF07663 Sorbitol phosphotransferase enzyme II C-terminus 226 318 5.7E-43 T 09-03-2017 IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal GO:0008982|GO:0009401|GO:0016021 RG43_RS06365 38defd9fb751e2ec03f2e8c87ad55a28 319 Pfam PF03612 Sorbitol phosphotransferase enzyme II N-terminus 4 171 1.1E-67 T 09-03-2017 IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal GO:0008982|GO:0009401|GO:0016021 RG43_RS12625 8bc0e47036aff2a591ce082eed168023 433 SMART SM00387 315 425 5.5E-34 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS12625 8bc0e47036aff2a591ce082eed168023 433 Gene3D G3DSA:3.30.565.10 274 425 1.2E-35 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS12625 8bc0e47036aff2a591ce082eed168023 433 SMART SM00304 158 210 2.5E-6 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RG43_RS12625 8bc0e47036aff2a591ce082eed168023 433 SUPERFAMILY SSF55874 261 424 4.32E-36 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS12625 8bc0e47036aff2a591ce082eed168023 433 SUPERFAMILY SSF47384 194 271 9.02E-12 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS12625 8bc0e47036aff2a591ce082eed168023 433 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 423 1.3E-18 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS12625 8bc0e47036aff2a591ce082eed168023 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 3.6E-13 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS12625 8bc0e47036aff2a591ce082eed168023 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 3.6E-13 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS12625 8bc0e47036aff2a591ce082eed168023 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 3.6E-13 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS12625 8bc0e47036aff2a591ce082eed168023 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 3.6E-13 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS12625 8bc0e47036aff2a591ce082eed168023 433 SMART SM00388 211 271 2.3E-8 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS12625 8bc0e47036aff2a591ce082eed168023 433 Gene3D G3DSA:1.10.287.130 201 267 1.3E-13 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS12625 8bc0e47036aff2a591ce082eed168023 433 Pfam PF00512 His Kinase A (phospho-acceptor) domain 211 270 2.5E-7 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS03935 31e0509b5faa61708629452d24f29855 66 Pfam PF08971 Glycogen synthesis protein 1 66 1.4E-40 T 09-03-2017 IPR015065 Surface composition regulator RG43_RS03935 31e0509b5faa61708629452d24f29855 66 SUPERFAMILY SSF109747 1 66 6.41E-43 T 09-03-2017 IPR015065 Surface composition regulator RG43_RS03935 31e0509b5faa61708629452d24f29855 66 Hamap MF_00525 Surface composition regulator [glgS]. 1 59 19.884 T 09-03-2017 IPR015065 Surface composition regulator RG43_RS03935 31e0509b5faa61708629452d24f29855 66 ProDom PD054490 GLYCOGEN GLGS SYNTHESIS BIOSYNTHESIS DEPENDENT BIOSYNTHESIS RPOS 3D-STRUCTURE 1 66 3.0E-34 T 09-03-2017 IPR015065 Surface composition regulator RG43_RS03935 31e0509b5faa61708629452d24f29855 66 Gene3D G3DSA:1.20.970.20 1 66 2.5E-40 T 09-03-2017 IPR015065 Surface composition regulator RG43_RS26310 31e0509b5faa61708629452d24f29855 66 Pfam PF08971 Glycogen synthesis protein 1 66 1.4E-40 T 09-03-2017 IPR015065 Surface composition regulator RG43_RS26310 31e0509b5faa61708629452d24f29855 66 SUPERFAMILY SSF109747 1 66 6.41E-43 T 09-03-2017 IPR015065 Surface composition regulator RG43_RS26310 31e0509b5faa61708629452d24f29855 66 Hamap MF_00525 Surface composition regulator [glgS]. 1 59 19.884 T 09-03-2017 IPR015065 Surface composition regulator RG43_RS26310 31e0509b5faa61708629452d24f29855 66 ProDom PD054490 GLYCOGEN GLGS SYNTHESIS BIOSYNTHESIS DEPENDENT BIOSYNTHESIS RPOS 3D-STRUCTURE 1 66 3.0E-34 T 09-03-2017 IPR015065 Surface composition regulator RG43_RS26310 31e0509b5faa61708629452d24f29855 66 Gene3D G3DSA:1.20.970.20 1 66 2.5E-40 T 09-03-2017 IPR015065 Surface composition regulator RG43_RS09360 5bad919e59caf0c6be28594a88f24b9a 284 TIGRFAM TIGR01858 tag_bisphos_ald: class II aldolase, tagatose bisphosphate family 3 284 8.9E-163 T 09-03-2017 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY GO:0005975|GO:0008270|GO:0009025 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395 RG43_RS09360 5bad919e59caf0c6be28594a88f24b9a 284 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 284 5.5E-111 T 09-03-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RG43_RS09360 5bad919e59caf0c6be28594a88f24b9a 284 Gene3D G3DSA:3.20.20.70 1 284 1.6E-113 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS09360 5bad919e59caf0c6be28594a88f24b9a 284 PIRSF PIRSF001359 1 284 8.0E-115 T 09-03-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RG43_RS09360 5bad919e59caf0c6be28594a88f24b9a 284 Hamap MF_01294 D-tagatose-1,6-bisphosphate aldolase subunit GatY [gatY]. 1 284 70.791 T 09-03-2017 IPR023955 D-tagatose-bisphosphate aldolase, class II, subunit GatY GO:0009025|GO:0019404|GO:2001059 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395 RG43_RS09360 5bad919e59caf0c6be28594a88f24b9a 284 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 09-03-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RG43_RS09360 5bad919e59caf0c6be28594a88f24b9a 284 SUPERFAMILY SSF51569 3 283 3.66E-97 T 09-03-2017 RG43_RS09360 5bad919e59caf0c6be28594a88f24b9a 284 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 84 - T 09-03-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RG43_RS09360 5bad919e59caf0c6be28594a88f24b9a 284 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 283 1.8E-98 T 09-03-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RG43_RS06645 02e1bca41ed82d7c403c4d61f8e3d64e 413 SUPERFAMILY SSF54631 177 314 5.98E-23 T 09-03-2017 RG43_RS06645 02e1bca41ed82d7c403c4d61f8e3d64e 413 SMART SM01091 327 405 1.7E-25 T 09-03-2017 IPR005170 Transporter-associated domain RG43_RS06645 02e1bca41ed82d7c403c4d61f8e3d64e 413 SUPERFAMILY SSF56176 325 407 1.2E-21 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RG43_RS06645 02e1bca41ed82d7c403c4d61f8e3d64e 413 Pfam PF01595 Domain of unknown function DUF21 2 169 9.5E-49 T 09-03-2017 IPR002550 Domain of unknown function DUF21 RG43_RS06645 02e1bca41ed82d7c403c4d61f8e3d64e 413 Gene3D G3DSA:3.10.580.10 176 315 1.1E-12 T 09-03-2017 RG43_RS06645 02e1bca41ed82d7c403c4d61f8e3d64e 413 Pfam PF00571 CBS domain 263 311 1.2E-4 T 09-03-2017 IPR000644 CBS domain RG43_RS06645 02e1bca41ed82d7c403c4d61f8e3d64e 413 Gene3D G3DSA:3.30.465.10 325 403 8.3E-25 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RG43_RS06645 02e1bca41ed82d7c403c4d61f8e3d64e 413 Pfam PF03471 Transporter associated domain 329 403 8.5E-19 T 09-03-2017 IPR005170 Transporter-associated domain RG43_RS01135 f2d3c5bae66db1309f8894f32bd654cd 62 Pfam PF10945 Cellulose biosynthesis protein BcsR 18 59 7.3E-23 T 09-03-2017 IPR024487 Cellulose biosynthesis protein BcsR RG43_RS01135 f2d3c5bae66db1309f8894f32bd654cd 62 ProDom PD053230 YHJR ECS4415 STY4179 CYTOPLASMIC 1 62 7.0E-29 T 09-03-2017 IPR024487 Cellulose biosynthesis protein BcsR RG43_RS13815 a992f612fc7acfbf30051e77fc05f983 755 Gene3D G3DSA:2.60.420.10 663 732 1.4E-22 T 09-03-2017 RG43_RS13815 a992f612fc7acfbf30051e77fc05f983 755 Gene3D G3DSA:1.50.10.10 294 662 2.6E-123 T 09-03-2017 IPR012341 Six-hairpin glycosidase GO:0003824 RG43_RS13815 a992f612fc7acfbf30051e77fc05f983 755 Pfam PF03632 Glycosyl hydrolase family 65 central catalytic domain 298 677 1.7E-150 T 09-03-2017 IPR005195 Glycoside hydrolase, family 65, central catalytic GO:0003824|GO:0005975 RG43_RS13815 a992f612fc7acfbf30051e77fc05f983 755 Pfam PF03636 Glycosyl hydrolase family 65, N-terminal domain 9 237 3.7E-48 T 09-03-2017 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 RG43_RS13815 a992f612fc7acfbf30051e77fc05f983 755 PIRSF PIRSF036289 1 741 5.9E-228 T 09-03-2017 IPR017045 Maltose phosphorylase/glycosyl hydrolase/vacuolar acid trehalase RG43_RS13815 a992f612fc7acfbf30051e77fc05f983 755 Gene3D G3DSA:2.70.98.40 4 240 1.9E-63 T 09-03-2017 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 RG43_RS13815 a992f612fc7acfbf30051e77fc05f983 755 Pfam PF03633 Glycosyl hydrolase family 65, C-terminal domain 681 727 6.0E-10 T 09-03-2017 IPR005194 Glycoside hydrolase family 65, C-terminal RG43_RS13815 a992f612fc7acfbf30051e77fc05f983 755 SUPERFAMILY SSF74650 6 240 1.88E-52 T 09-03-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 RG43_RS13815 a992f612fc7acfbf30051e77fc05f983 755 SUPERFAMILY SSF48208 250 719 1.9E-107 T 09-03-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 RG43_RS04090 72e9cd14d6155e031b7a1ce94febf434 315 Gene3D G3DSA:3.40.50.1980 23 153 2.7E-22 T 09-03-2017 RG43_RS04090 72e9cd14d6155e031b7a1ce94febf434 315 SUPERFAMILY SSF53807 22 293 5.1E-41 T 09-03-2017 RG43_RS04090 72e9cd14d6155e031b7a1ce94febf434 315 Pfam PF01497 Periplasmic binding protein 97 254 1.1E-19 T 09-03-2017 IPR002491 ABC transporter periplasmic binding domain GO:0005488 RG43_RS04090 72e9cd14d6155e031b7a1ce94febf434 315 Gene3D G3DSA:3.40.50.1980 163 306 8.2E-13 T 09-03-2017 RG43_RS26465 72e9cd14d6155e031b7a1ce94febf434 315 Gene3D G3DSA:3.40.50.1980 23 153 2.7E-22 T 09-03-2017 RG43_RS26465 72e9cd14d6155e031b7a1ce94febf434 315 SUPERFAMILY SSF53807 22 293 5.1E-41 T 09-03-2017 RG43_RS26465 72e9cd14d6155e031b7a1ce94febf434 315 Pfam PF01497 Periplasmic binding protein 97 254 1.1E-19 T 09-03-2017 IPR002491 ABC transporter periplasmic binding domain GO:0005488 RG43_RS26465 72e9cd14d6155e031b7a1ce94febf434 315 Gene3D G3DSA:3.40.50.1980 163 306 8.2E-13 T 09-03-2017 RG43_RS25355 0f6889e2e928d568ebb3d2f134a5172e 230 Pfam PF07729 FCD domain 108 226 6.1E-19 T 09-03-2017 IPR011711 GntR, C-terminal RG43_RS25355 0f6889e2e928d568ebb3d2f134a5172e 230 SMART SM00345 18 77 4.8E-20 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS25355 0f6889e2e928d568ebb3d2f134a5172e 230 Gene3D G3DSA:1.10.10.10 11 87 6.9E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS25355 0f6889e2e928d568ebb3d2f134a5172e 230 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 1.4E-9 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS25355 0f6889e2e928d568ebb3d2f134a5172e 230 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 1.4E-9 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS25355 0f6889e2e928d568ebb3d2f134a5172e 230 SUPERFAMILY SSF46785 10 81 7.61E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS25355 0f6889e2e928d568ebb3d2f134a5172e 230 Gene3D G3DSA:1.20.120.530 104 226 4.3E-17 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal RG43_RS25355 0f6889e2e928d568ebb3d2f134a5172e 230 SMART SM00895 106 227 8.7E-17 T 09-03-2017 IPR011711 GntR, C-terminal RG43_RS25355 0f6889e2e928d568ebb3d2f134a5172e 230 SUPERFAMILY SSF48008 106 226 3.4E-19 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal RG43_RS25355 0f6889e2e928d568ebb3d2f134a5172e 230 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 77 5.2E-19 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS17890 416e6b328d255b232fc4d25449f34574 105 SUPERFAMILY SSF81301 4 105 1.59E-37 T 09-03-2017 RG43_RS17890 416e6b328d255b232fc4d25449f34574 105 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 7.0E-29 T 09-03-2017 RG43_RS17890 416e6b328d255b232fc4d25449f34574 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 24.806 T 09-03-2017 IPR004394 Protein Iojap/ribosomal silencing factor RsfS RG43_RS17890 416e6b328d255b232fc4d25449f34574 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 4.4E-38 T 09-03-2017 IPR004394 Protein Iojap/ribosomal silencing factor RsfS RG43_RS17890 416e6b328d255b232fc4d25449f34574 105 Gene3D G3DSA:3.30.460.10 4 105 4.1E-38 T 09-03-2017 RG43_RS16130 abc501f5c77c7a30b01513b7fa11f8ce 203 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 9 201 33.028 T 09-03-2017 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 RG43_RS16130 abc501f5c77c7a30b01513b7fa11f8ce 203 SUPERFAMILY SSF89392 22 202 1.22E-57 T 09-03-2017 IPR029046 Lipoprotein localisation LolA/LolB/LppX RG43_RS16130 abc501f5c77c7a30b01513b7fa11f8ce 203 Gene3D G3DSA:2.50.20.10 23 203 6.7E-61 T 09-03-2017 RG43_RS16130 abc501f5c77c7a30b01513b7fa11f8ce 203 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 1 203 5.6E-124 T 09-03-2017 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 RG43_RS16130 abc501f5c77c7a30b01513b7fa11f8ce 203 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 33 191 1.1E-58 T 09-03-2017 IPR004564 Outer membrane lipoprotein carrier protein LolA-like RG43_RS03305 76e1f3377398e08fba29973fda8edddd 426 Gene3D G3DSA:3.20.20.70 5 294 4.3E-147 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS03305 76e1f3377398e08fba29973fda8edddd 426 TIGRFAM TIGR02810 agaZ_gatZ: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit 6 424 2.5E-216 T 09-03-2017 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 RG43_RS03305 76e1f3377398e08fba29973fda8edddd 426 SUPERFAMILY SSF51569 4 423 1.61E-170 T 09-03-2017 RG43_RS03305 76e1f3377398e08fba29973fda8edddd 426 PIRSF PIRSF009264 1 426 2.1E-210 T 09-03-2017 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 RG43_RS03305 76e1f3377398e08fba29973fda8edddd 426 Gene3D G3DSA:1.10.400.20 295 409 1.3E-53 T 09-03-2017 RG43_RS03305 76e1f3377398e08fba29973fda8edddd 426 Hamap MF_01295 D-tagatose-1,6-bisphosphate aldolase subunit KbaZ [kbaZ]. 1 426 81.902 T 09-03-2017 IPR023435 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit KbaZ RG43_RS03305 76e1f3377398e08fba29973fda8edddd 426 Pfam PF08013 Tagatose 6 phosphate kinase 4 423 3.2E-201 T 09-03-2017 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 RG43_RS14865 fb9a8b640c464a4aa7ca8951cb3a41f7 456 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 4.9E-17 T 09-03-2017 IPR000362 Fumarate lyase family RG43_RS14865 fb9a8b640c464a4aa7ca8951cb3a41f7 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 4.9E-17 T 09-03-2017 IPR000362 Fumarate lyase family RG43_RS14865 fb9a8b640c464a4aa7ca8951cb3a41f7 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 4.9E-17 T 09-03-2017 IPR000362 Fumarate lyase family RG43_RS14865 fb9a8b640c464a4aa7ca8951cb3a41f7 456 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 4.9E-17 T 09-03-2017 IPR000362 Fumarate lyase family RG43_RS14865 fb9a8b640c464a4aa7ca8951cb3a41f7 456 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 09-03-2017 IPR020557 Fumarate lyase, conserved site GO:0003824 RG43_RS14865 fb9a8b640c464a4aa7ca8951cb3a41f7 456 Gene3D G3DSA:1.20.200.10 120 389 1.4E-88 T 09-03-2017 RG43_RS14865 fb9a8b640c464a4aa7ca8951cb3a41f7 456 Pfam PF00206 Lyase 14 312 1.3E-84 T 09-03-2017 IPR022761 Fumarate lyase, N-terminal RG43_RS14865 fb9a8b640c464a4aa7ca8951cb3a41f7 456 Gene3D G3DSA:1.10.275.10 1 119 2.0E-49 T 09-03-2017 IPR024083 Fumarase/histidase, N-terminal RG43_RS14865 fb9a8b640c464a4aa7ca8951cb3a41f7 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 1.4E-52 T 09-03-2017 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 RG43_RS14865 fb9a8b640c464a4aa7ca8951cb3a41f7 456 Gene3D G3DSA:1.10.40.30 390 445 1.0E-34 T 09-03-2017 RG43_RS14865 fb9a8b640c464a4aa7ca8951cb3a41f7 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 455 9.9E-159 T 09-03-2017 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RG43_RS14865 fb9a8b640c464a4aa7ca8951cb3a41f7 456 SUPERFAMILY SSF48557 10 454 1.52E-106 T 09-03-2017 IPR008948 L-Aspartase-like GO:0003824 RG43_RS21645 8acc9e4af6709ad61750a1797e79cf86 338 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 250 332 9.6E-18 T 09-03-2017 IPR019491 Lipoate protein ligase, C-terminal RG43_RS21645 8acc9e4af6709ad61750a1797e79cf86 338 Pfam PF03099 Biotin/lipoate A/B protein ligase family 52 158 3.6E-9 T 09-03-2017 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 RG43_RS21645 8acc9e4af6709ad61750a1797e79cf86 338 Gene3D G3DSA:3.90.1550.10 1 247 3.0E-86 T 09-03-2017 RG43_RS21645 8acc9e4af6709ad61750a1797e79cf86 338 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 1 329 4.8E-143 T 09-03-2017 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 Reactome: R-HSA-389661 RG43_RS21645 8acc9e4af6709ad61750a1797e79cf86 338 SUPERFAMILY SSF55681 3 247 5.05E-82 T 09-03-2017 RG43_RS21645 8acc9e4af6709ad61750a1797e79cf86 338 Gene3D G3DSA:3.30.390.50 249 333 8.4E-14 T 09-03-2017 RG43_RS21645 8acc9e4af6709ad61750a1797e79cf86 338 Hamap MF_01602 Lipoate-protein ligase A [lplA]. 1 338 59.977 T 09-03-2017 IPR023741 Lipoate-protein ligase A GO:0016979|GO:0018055 RG43_RS21645 8acc9e4af6709ad61750a1797e79cf86 338 SUPERFAMILY SSF82649 248 335 1.15E-24 T 09-03-2017 RG43_RS14090 2bd57ddfe02e70093ee508c7f3829c16 349 Gene3D G3DSA:3.90.226.10 98 205 6.4E-37 T 09-03-2017 IPR029045 ClpP/crotonase-like domain RG43_RS14090 2bd57ddfe02e70093ee508c7f3829c16 349 Gene3D G3DSA:3.90.226.10 271 306 6.4E-37 T 09-03-2017 IPR029045 ClpP/crotonase-like domain RG43_RS14090 2bd57ddfe02e70093ee508c7f3829c16 349 Pfam PF01343 Peptidase family S49 161 310 4.0E-51 T 09-03-2017 IPR002142 Peptidase S49 GO:0006508|GO:0008233 RG43_RS14090 2bd57ddfe02e70093ee508c7f3829c16 349 SUPERFAMILY SSF52096 100 209 5.92E-33 T 09-03-2017 IPR029045 ClpP/crotonase-like domain RG43_RS14090 2bd57ddfe02e70093ee508c7f3829c16 349 SUPERFAMILY SSF52096 240 299 5.92E-33 T 09-03-2017 IPR029045 ClpP/crotonase-like domain RG43_RS14090 2bd57ddfe02e70093ee508c7f3829c16 349 Pfam PF08496 Peptidase family S49 N-terminal 2 158 2.4E-62 T 09-03-2017 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 RG43_RS18660 1e45afdb2dc6e271bd150e207fe01152 1120 Gene3D G3DSA:2.30.30.60 945 994 8.8E-18 T 09-03-2017 RG43_RS18660 1e45afdb2dc6e271bd150e207fe01152 1120 Pfam PF12795 Mechanosensitive ion channel porin domain 50 289 1.8E-64 T 09-03-2017 IPR024393 Mechanosensitive ion channel MscS, porin domain RG43_RS18660 1e45afdb2dc6e271bd150e207fe01152 1120 SUPERFAMILY SSF82689 998 1097 4.71E-26 T 09-03-2017 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 RG43_RS18660 1e45afdb2dc6e271bd150e207fe01152 1120 SUPERFAMILY SSF81665 683 770 1.14E-5 T 09-03-2017 RG43_RS18660 1e45afdb2dc6e271bd150e207fe01152 1120 SUPERFAMILY SSF81665 513 594 1.14E-5 T 09-03-2017 RG43_RS18660 1e45afdb2dc6e271bd150e207fe01152 1120 SUPERFAMILY SSF81665 844 900 1.14E-5 T 09-03-2017 RG43_RS18660 1e45afdb2dc6e271bd150e207fe01152 1120 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 509 826 4.0E-96 T 09-03-2017 IPR025692 Mechanosensitive ion channel inner membrane domain 1 RG43_RS18660 1e45afdb2dc6e271bd150e207fe01152 1120 SUPERFAMILY SSF82861 845 928 1.22E-8 T 09-03-2017 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 RG43_RS18660 1e45afdb2dc6e271bd150e207fe01152 1120 Gene3D G3DSA:3.30.70.100 999 1084 4.1E-23 T 09-03-2017 RG43_RS18660 1e45afdb2dc6e271bd150e207fe01152 1120 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 959 993 - T 09-03-2017 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 RG43_RS18660 1e45afdb2dc6e271bd150e207fe01152 1120 SUPERFAMILY SSF50182 930 995 6.87E-17 T 09-03-2017 IPR010920 LSM domain RG43_RS18660 1e45afdb2dc6e271bd150e207fe01152 1120 Pfam PF00924 Mechanosensitive ion channel 887 1086 2.5E-61 T 09-03-2017 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 RG43_RS00110 11434afcd7988168f2f14da40beefdcb 217 Pfam PF00665 Integrase core domain 46 161 1.5E-34 T 09-03-2017 IPR001584 Integrase, catalytic core GO:0015074 RG43_RS00110 11434afcd7988168f2f14da40beefdcb 217 SUPERFAMILY SSF53098 39 201 1.2E-42 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS00110 11434afcd7988168f2f14da40beefdcb 217 Gene3D G3DSA:3.30.420.10 40 199 2.3E-42 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS15720 5759713cbb8e6033c536d1ee214830d4 235 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 132 151 4.9E-47 T 09-03-2017 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 RG43_RS15720 5759713cbb8e6033c536d1ee214830d4 235 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 16 39 4.9E-47 T 09-03-2017 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 RG43_RS15720 5759713cbb8e6033c536d1ee214830d4 235 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 54 78 4.9E-47 T 09-03-2017 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 RG43_RS15720 5759713cbb8e6033c536d1ee214830d4 235 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 212 225 4.9E-47 T 09-03-2017 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 RG43_RS15720 5759713cbb8e6033c536d1ee214830d4 235 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 181 203 4.9E-47 T 09-03-2017 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 RG43_RS15720 5759713cbb8e6033c536d1ee214830d4 235 ProSitePatterns PS00882 Nickel-dependent hydrogenases b-type cytochrome subunit signature 1. 19 36 - T 09-03-2017 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 RG43_RS15720 5759713cbb8e6033c536d1ee214830d4 235 TIGRFAM TIGR02125 CytB-hydogenase: Ni/Fe-hydrogenase, b-type cytochrome subunit 12 225 1.9E-78 T 09-03-2017 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 RG43_RS15720 5759713cbb8e6033c536d1ee214830d4 235 SUPERFAMILY SSF81342 9 226 9.42E-40 T 09-03-2017 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 RG43_RS15720 5759713cbb8e6033c536d1ee214830d4 235 Gene3D G3DSA:1.20.950.20 11 226 7.0E-27 T 09-03-2017 RG43_RS15720 5759713cbb8e6033c536d1ee214830d4 235 ProSitePatterns PS00883 Nickel-dependent hydrogenases b-type cytochrome subunit signature 2. 181 198 - T 09-03-2017 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 RG43_RS15720 5759713cbb8e6033c536d1ee214830d4 235 Pfam PF01292 Prokaryotic cytochrome b561 14 220 7.4E-36 T 09-03-2017 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 RG43_RS00590 c13cc5045ef362d954c6f9f451df717d 331 Pfam PF08437 Glycosyl transferase family 8 C-terminal 275 331 2.4E-22 T 09-03-2017 IPR013645 Glycosyl transferase, family 8, C-terminal GO:0008918|GO:0009103 RG43_RS00590 c13cc5045ef362d954c6f9f451df717d 331 Gene3D G3DSA:3.90.550.10 23 296 1.5E-59 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS00590 c13cc5045ef362d954c6f9f451df717d 331 SUPERFAMILY SSF53448 24 294 1.54E-59 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS00590 c13cc5045ef362d954c6f9f451df717d 331 Pfam PF01501 Glycosyl transferase family 8 24 273 1.2E-63 T 09-03-2017 IPR002495 Glycosyl transferase, family 8 GO:0016757 RG43_RS09530 fbf2c72bb12d39b5535a3321e981738d 379 Gene3D G3DSA:3.30.1950.10 89 164 9.1E-33 T 09-03-2017 RG43_RS09530 fbf2c72bb12d39b5535a3321e981738d 379 Gene3D G3DSA:3.10.560.10 165 244 6.8E-28 T 09-03-2017 RG43_RS09530 fbf2c72bb12d39b5535a3321e981738d 379 Pfam PF10531 SLBB domain 173 220 3.7E-7 T 09-03-2017 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS09530 fbf2c72bb12d39b5535a3321e981738d 379 Pfam PF02563 Polysaccharide biosynthesis/export protein 81 165 4.4E-27 T 09-03-2017 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 RG43_RS09530 fbf2c72bb12d39b5535a3321e981738d 379 Gene3D G3DSA:1.20.5.70 347 379 6.8E-20 T 09-03-2017 RG43_RS09530 fbf2c72bb12d39b5535a3321e981738d 379 Gene3D G3DSA:3.10.560.10 245 346 2.8E-32 T 09-03-2017 RG43_RS17895 e1cf7bcdabbdf66cf859974522a5a4b9 155 SUPERFAMILY SSF75217 2 153 3.51E-50 T 09-03-2017 IPR029028 Alpha/beta knot methyltransferases RG43_RS17895 e1cf7bcdabbdf66cf859974522a5a4b9 155 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 155 1.7E-87 T 09-03-2017 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RG43_RS17895 e1cf7bcdabbdf66cf859974522a5a4b9 155 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 154 27.079 T 09-03-2017 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RG43_RS17895 e1cf7bcdabbdf66cf859974522a5a4b9 155 PIRSF PIRSF004505 1 154 6.1E-40 T 09-03-2017 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RG43_RS17895 e1cf7bcdabbdf66cf859974522a5a4b9 155 Gene3D G3DSA:3.40.1280.10 2 154 5.5E-53 T 09-03-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RG43_RS17895 e1cf7bcdabbdf66cf859974522a5a4b9 155 Pfam PF02590 Predicted SPOUT methyltransferase 2 153 2.9E-46 T 09-03-2017 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RG43_RS05840 b7cf3a8850a4b425f8b8b7af70fe047e 215 Gene3D G3DSA:3.40.225.10 1 210 4.3E-68 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal RG43_RS05840 b7cf3a8850a4b425f8b8b7af70fe047e 215 Hamap MF_00987 L-fuculose phosphate aldolase [fucA]. 1 215 62.403 T 09-03-2017 IPR004782 L-fucose phosphate aldolase GO:0006004|GO:0008270|GO:0008738 KEGG: 00051+4.1.2.17|MetaCyc: PWY-5197 RG43_RS05840 b7cf3a8850a4b425f8b8b7af70fe047e 215 SMART SM01007 8 182 8.7E-69 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal RG43_RS05840 b7cf3a8850a4b425f8b8b7af70fe047e 215 TIGRFAM TIGR01086 fucA: L-fuculose phosphate aldolase 2 215 2.2E-134 T 09-03-2017 IPR004782 L-fucose phosphate aldolase GO:0006004|GO:0008270|GO:0008738 KEGG: 00051+4.1.2.17|MetaCyc: PWY-5197 RG43_RS05840 b7cf3a8850a4b425f8b8b7af70fe047e 215 SUPERFAMILY SSF53639 1 212 5.3E-70 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal RG43_RS05840 b7cf3a8850a4b425f8b8b7af70fe047e 215 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 182 1.6E-48 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal RG43_RS24670 57bebe9c13da525f9cde187fb901cd5e 349 Pfam PF00512 His Kinase A (phospho-acceptor) domain 131 186 3.6E-14 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS24670 57bebe9c13da525f9cde187fb901cd5e 349 SUPERFAMILY SSF47384 121 186 3.53E-12 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS24670 57bebe9c13da525f9cde187fb901cd5e 349 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 347 4.9E-17 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS24670 57bebe9c13da525f9cde187fb901cd5e 349 SMART SM00388 129 194 2.5E-13 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS24670 57bebe9c13da525f9cde187fb901cd5e 349 SMART SM00387 233 349 1.2E-33 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS24670 57bebe9c13da525f9cde187fb901cd5e 349 SUPERFAMILY SSF55874 198 346 6.42E-38 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS24670 57bebe9c13da525f9cde187fb901cd5e 349 SUPERFAMILY SSF55785 11 104 9.18E-7 T 09-03-2017 IPR000014 PAS domain RG43_RS24670 57bebe9c13da525f9cde187fb901cd5e 349 Gene3D G3DSA:3.30.450.20 11 102 8.4E-21 T 09-03-2017 RG43_RS24670 57bebe9c13da525f9cde187fb901cd5e 349 Pfam PF00989 PAS fold 11 99 2.8E-7 T 09-03-2017 IPR013767 PAS fold GO:0006355 RG43_RS24670 57bebe9c13da525f9cde187fb901cd5e 349 Gene3D G3DSA:3.30.565.10 198 348 2.3E-38 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS24670 57bebe9c13da525f9cde187fb901cd5e 349 Gene3D G3DSA:1.10.287.130 129 186 1.4E-10 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS24670 57bebe9c13da525f9cde187fb901cd5e 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 281 295 1.2E-11 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS24670 57bebe9c13da525f9cde187fb901cd5e 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 328 1.2E-11 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS24670 57bebe9c13da525f9cde187fb901cd5e 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 346 1.2E-11 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS24670 57bebe9c13da525f9cde187fb901cd5e 349 SMART SM00091 7 75 4.0E-8 T 09-03-2017 IPR000014 PAS domain RG43_RS11650 650330ce93204fe59b529bb003da058b 307 Pfam PF03466 LysR substrate binding domain 91 295 1.8E-36 T 09-03-2017 IPR005119 LysR, substrate-binding RG43_RS11650 650330ce93204fe59b529bb003da058b 307 Gene3D G3DSA:3.40.190.10 180 264 1.8E-23 T 09-03-2017 RG43_RS11650 650330ce93204fe59b529bb003da058b 307 SUPERFAMILY SSF53850 93 300 1.23E-40 T 09-03-2017 RG43_RS11650 650330ce93204fe59b529bb003da058b 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 3.9E-16 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS11650 650330ce93204fe59b529bb003da058b 307 Gene3D G3DSA:1.10.10.10 7 90 7.8E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS11650 650330ce93204fe59b529bb003da058b 307 Gene3D G3DSA:3.40.190.10 96 179 1.9E-21 T 09-03-2017 RG43_RS11650 650330ce93204fe59b529bb003da058b 307 SUPERFAMILY SSF46785 7 90 1.06E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS13720 1292da009aa32cef15c5f4f65ad64f77 250 SMART SM00419 187 235 2.8E-13 T 09-03-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RG43_RS13720 1292da009aa32cef15c5f4f65ad64f77 250 SMART SM00100 30 151 2.9E-22 T 09-03-2017 IPR000595 Cyclic nucleotide-binding domain RG43_RS13720 1292da009aa32cef15c5f4f65ad64f77 250 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 9.8E-16 T 09-03-2017 IPR000595 Cyclic nucleotide-binding domain RG43_RS13720 1292da009aa32cef15c5f4f65ad64f77 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 2.2E-12 T 09-03-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RG43_RS13720 1292da009aa32cef15c5f4f65ad64f77 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 2.2E-12 T 09-03-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RG43_RS13720 1292da009aa32cef15c5f4f65ad64f77 250 SUPERFAMILY SSF46785 165 246 2.11E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS13720 1292da009aa32cef15c5f4f65ad64f77 250 Gene3D G3DSA:2.60.120.10 18 169 1.6E-40 T 09-03-2017 IPR014710 RmlC-like jelly roll fold RG43_RS13720 1292da009aa32cef15c5f4f65ad64f77 250 Gene3D G3DSA:1.10.10.10 170 244 6.3E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS13720 1292da009aa32cef15c5f4f65ad64f77 250 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 09-03-2017 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 RG43_RS13720 1292da009aa32cef15c5f4f65ad64f77 250 Pfam PF13545 Crp-like helix-turn-helix domain 168 242 2.2E-16 T 09-03-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RG43_RS13720 1292da009aa32cef15c5f4f65ad64f77 250 SUPERFAMILY SSF51206 23 162 1.27E-31 T 09-03-2017 IPR018490 Cyclic nucleotide-binding-like RG43_RS21875 b3471aa543518d2a65683c8accb7e50e 318 Gene3D G3DSA:3.40.50.300 2 201 1.6E-70 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS21875 b3471aa543518d2a65683c8accb7e50e 318 Gene3D G3DSA:3.30.1220.10 208 315 1.1E-31 T 09-03-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RG43_RS21875 b3471aa543518d2a65683c8accb7e50e 318 SMART SM00833 224 317 1.3E-10 T 09-03-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RG43_RS21875 b3471aa543518d2a65683c8accb7e50e 318 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 224 315 1.4E-18 T 09-03-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RG43_RS21875 b3471aa543518d2a65683c8accb7e50e 318 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 182 1.5E-50 T 09-03-2017 IPR003495 CobW/HypB/UreG, nucleotide-binding domain RG43_RS21875 b3471aa543518d2a65683c8accb7e50e 318 SUPERFAMILY SSF90002 224 315 2.88E-25 T 09-03-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RG43_RS21875 b3471aa543518d2a65683c8accb7e50e 318 SUPERFAMILY SSF52540 2 201 1.32E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS03595 08b1c1cb2cf6c07543aaddb95f86bc10 468 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 277 314 - T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RG43_RS03595 08b1c1cb2cf6c07543aaddb95f86bc10 468 Pfam PF00202 Aminotransferase class-III 83 458 6.2E-105 T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RG43_RS03595 08b1c1cb2cf6c07543aaddb95f86bc10 468 PIRSF PIRSF000521 63 461 1.1E-45 T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RG43_RS03595 08b1c1cb2cf6c07543aaddb95f86bc10 468 Gene3D G3DSA:3.40.640.10 109 348 2.8E-92 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS03595 08b1c1cb2cf6c07543aaddb95f86bc10 468 SUPERFAMILY SSF53383 83 459 2.95E-120 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS03595 08b1c1cb2cf6c07543aaddb95f86bc10 468 Hamap MF_01276 Putrescine aminotransferase [patA]. 10 468 90.601 T 09-03-2017 IPR017747 Putrescine aminotransferase GO:0009447|GO:0030170|GO:0033094 KEGG: 00330+2.6.1.82|MetaCyc: PWY-2|MetaCyc: PWY-6440 RG43_RS03595 08b1c1cb2cf6c07543aaddb95f86bc10 468 Gene3D G3DSA:3.90.1150.10 349 461 9.7E-36 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RG43_RS03595 08b1c1cb2cf6c07543aaddb95f86bc10 468 TIGRFAM TIGR03372 putres_am_tran: putrescine aminotransferase 17 458 3.6E-295 T 09-03-2017 IPR017747 Putrescine aminotransferase GO:0009447|GO:0030170|GO:0033094 KEGG: 00330+2.6.1.82|MetaCyc: PWY-2|MetaCyc: PWY-6440 RG43_RS15860 cd3c3d5c061a7f456b07c34c09f584a9 702 Gene3D G3DSA:3.40.50.150 432 700 2.5E-75 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS15860 cd3c3d5c061a7f456b07c34c09f584a9 702 SUPERFAMILY SSF53335 396 698 1.1E-69 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS15860 cd3c3d5c061a7f456b07c34c09f584a9 702 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 303 315 4.8E-5 T 09-03-2017 RG43_RS15860 cd3c3d5c061a7f456b07c34c09f584a9 702 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 193 207 4.8E-5 T 09-03-2017 RG43_RS15860 cd3c3d5c061a7f456b07c34c09f584a9 702 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 09-03-2017 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RG43_RS15860 cd3c3d5c061a7f456b07c34c09f584a9 702 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 702 32.766 T 09-03-2017 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RG43_RS15860 cd3c3d5c061a7f456b07c34c09f584a9 702 Gene3D G3DSA:3.40.50.150 255 330 1.7E-29 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS15860 cd3c3d5c061a7f456b07c34c09f584a9 702 Gene3D G3DSA:3.40.50.150 147 214 1.7E-29 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS15860 cd3c3d5c061a7f456b07c34c09f584a9 702 Pfam PF01170 Putative RNA methylase family UPF0020 162 375 9.5E-66 T 09-03-2017 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RG43_RS15860 cd3c3d5c061a7f456b07c34c09f584a9 702 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 475 658 7.6E-20 T 09-03-2017 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 RG43_RS15860 cd3c3d5c061a7f456b07c34c09f584a9 702 SMART SM00981 56 154 1.2E-19 T 09-03-2017 IPR004114 THUMP domain GO:0003723 RG43_RS15860 cd3c3d5c061a7f456b07c34c09f584a9 702 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 306 312 - T 09-03-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RG43_RS15860 cd3c3d5c061a7f456b07c34c09f584a9 702 Pfam PF02926 THUMP domain 23 153 2.9E-20 T 09-03-2017 IPR004114 THUMP domain GO:0003723 RG43_RS15860 cd3c3d5c061a7f456b07c34c09f584a9 702 SUPERFAMILY SSF53335 145 217 1.32E-40 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS15860 cd3c3d5c061a7f456b07c34c09f584a9 702 SUPERFAMILY SSF53335 258 373 1.32E-40 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS15860 cd3c3d5c061a7f456b07c34c09f584a9 702 PIRSF PIRSF037618 1 702 6.9E-296 T 09-03-2017 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RG43_RS01585 80fc84758c6f971322646c5516b8915f 284 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS01585 80fc84758c6f971322646c5516b8915f 284 SUPERFAMILY SSF88946 15 122 2.75E-38 T 09-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS01585 80fc84758c6f971322646c5516b8915f 284 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 284 55.487 T 09-03-2017 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 RG43_RS01585 80fc84758c6f971322646c5516b8915f 284 PRINTS PR00046 Major sigma-70 factor signature 77 90 4.9E-19 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS01585 80fc84758c6f971322646c5516b8915f 284 PRINTS PR00046 Major sigma-70 factor signature 232 244 4.9E-19 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS01585 80fc84758c6f971322646c5516b8915f 284 PRINTS PR00046 Major sigma-70 factor signature 267 278 4.9E-19 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS01585 80fc84758c6f971322646c5516b8915f 284 PRINTS PR00046 Major sigma-70 factor signature 252 267 4.9E-19 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS01585 80fc84758c6f971322646c5516b8915f 284 Gene3D G3DSA:1.10.10.10 224 282 9.4E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS01585 80fc84758c6f971322646c5516b8915f 284 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 281 3.9E-35 T 09-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS01585 80fc84758c6f971322646c5516b8915f 284 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 14 283 7.4E-130 T 09-03-2017 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 RG43_RS01585 80fc84758c6f971322646c5516b8915f 284 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 252 278 - T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS01585 80fc84758c6f971322646c5516b8915f 284 SUPERFAMILY SSF88659 200 283 4.11E-19 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS01585 80fc84758c6f971322646c5516b8915f 284 Pfam PF04545 Sigma-70, region 4 228 280 7.3E-17 T 09-03-2017 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS01585 80fc84758c6f971322646c5516b8915f 284 Gene3D G3DSA:1.10.601.10 15 122 1.0E-33 T 09-03-2017 RG43_RS01585 80fc84758c6f971322646c5516b8915f 284 PIRSF PIRSF000770 14 284 1.6E-33 T 09-03-2017 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 RG43_RS01585 80fc84758c6f971322646c5516b8915f 284 Pfam PF04542 Sigma-70 region 2 53 122 5.3E-17 T 09-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS08665 bf82501ceca5d8b879280dc32460a00b 461 Pfam PF00072 Response regulator receiver domain 7 115 3.8E-30 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS08665 bf82501ceca5d8b879280dc32460a00b 461 Gene3D G3DSA:1.10.8.60 318 390 3.4E-26 T 09-03-2017 RG43_RS08665 bf82501ceca5d8b879280dc32460a00b 461 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 358 367 - T 09-03-2017 IPR025944 Sigma-54 interaction domain, conserved site RG43_RS08665 bf82501ceca5d8b879280dc32460a00b 461 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 169 182 - T 09-03-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RG43_RS08665 bf82501ceca5d8b879280dc32460a00b 461 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 231 246 - T 09-03-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RG43_RS08665 bf82501ceca5d8b879280dc32460a00b 461 SMART SM00382 165 308 6.4E-14 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS08665 bf82501ceca5d8b879280dc32460a00b 461 SMART SM00448 5 116 3.9E-42 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS08665 bf82501ceca5d8b879280dc32460a00b 461 Gene3D G3DSA:3.40.50.2300 6 129 6.6E-42 T 09-03-2017 RG43_RS08665 bf82501ceca5d8b879280dc32460a00b 461 SUPERFAMILY SSF52172 6 190 7.54E-50 T 09-03-2017 IPR011006 CheY-like superfamily RG43_RS08665 bf82501ceca5d8b879280dc32460a00b 461 SUPERFAMILY SSF46689 358 457 1.43E-15 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS08665 bf82501ceca5d8b879280dc32460a00b 461 Gene3D G3DSA:3.40.50.300 144 317 1.1E-59 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS08665 bf82501ceca5d8b879280dc32460a00b 461 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 437 457 1.4E-11 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RG43_RS08665 bf82501ceca5d8b879280dc32460a00b 461 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 420 437 1.4E-11 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RG43_RS08665 bf82501ceca5d8b879280dc32460a00b 461 Pfam PF00158 Sigma-54 interaction domain 146 311 3.3E-73 T 09-03-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RG43_RS08665 bf82501ceca5d8b879280dc32460a00b 461 SUPERFAMILY SSF52540 145 388 9.2E-73 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS08665 bf82501ceca5d8b879280dc32460a00b 461 Gene3D G3DSA:1.10.10.60 391 457 1.8E-18 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS08665 bf82501ceca5d8b879280dc32460a00b 461 Pfam PF02954 Bacterial regulatory protein, Fis family 415 454 4.7E-14 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RG43_RS23405 1c6df200f11ed98ffe1c14281172482b 171 Gene3D G3DSA:1.10.10.10 12 83 4.3E-15 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS23405 1c6df200f11ed98ffe1c14281172482b 171 SUPERFAMILY SSF46785 12 144 8.75E-34 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS23405 1c6df200f11ed98ffe1c14281172482b 171 Pfam PF01475 Ferric uptake regulator family 20 138 4.1E-15 T 09-03-2017 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 RG43_RS15445 03fdf1ae23c103969858b4f22ed3a5f7 307 Gene3D G3DSA:3.40.50.300 102 306 3.9E-68 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS15445 03fdf1ae23c103969858b4f22ed3a5f7 307 SUPERFAMILY SSF52540 101 284 2.16E-32 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS15445 03fdf1ae23c103969858b4f22ed3a5f7 307 Pfam PF02562 PhoH-like protein 102 306 1.6E-76 T 09-03-2017 IPR003714 PhoH-like protein GO:0005524 RG43_RS24925 50f35910b3f5656dc2019467f07353fd 318 SUPERFAMILY SSF53633 6 316 3.14E-74 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase RG43_RS24925 50f35910b3f5656dc2019467f07353fd 318 TIGRFAM TIGR00746 arcC: carbamate kinase 6 317 4.7E-110 T 09-03-2017 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 RG43_RS24925 50f35910b3f5656dc2019467f07353fd 318 Gene3D G3DSA:3.40.1160.10 6 317 3.3E-95 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase RG43_RS24925 50f35910b3f5656dc2019467f07353fd 318 Pfam PF00696 Amino acid kinase family 5 287 1.5E-26 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase RG43_RS24925 50f35910b3f5656dc2019467f07353fd 318 PIRSF PIRSF000723 2 318 2.2E-132 T 09-03-2017 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 RG43_RS24925 50f35910b3f5656dc2019467f07353fd 318 PRINTS PR01469 Bacterial carbamate kinase signature 160 179 5.8E-55 T 09-03-2017 RG43_RS24925 50f35910b3f5656dc2019467f07353fd 318 PRINTS PR01469 Bacterial carbamate kinase signature 183 201 5.8E-55 T 09-03-2017 RG43_RS24925 50f35910b3f5656dc2019467f07353fd 318 PRINTS PR01469 Bacterial carbamate kinase signature 45 64 5.8E-55 T 09-03-2017 RG43_RS24925 50f35910b3f5656dc2019467f07353fd 318 PRINTS PR01469 Bacterial carbamate kinase signature 76 94 5.8E-55 T 09-03-2017 RG43_RS24925 50f35910b3f5656dc2019467f07353fd 318 PRINTS PR01469 Bacterial carbamate kinase signature 213 228 5.8E-55 T 09-03-2017 RG43_RS24925 50f35910b3f5656dc2019467f07353fd 318 PRINTS PR01469 Bacterial carbamate kinase signature 268 283 5.8E-55 T 09-03-2017 RG43_RS24925 50f35910b3f5656dc2019467f07353fd 318 PRINTS PR01469 Bacterial carbamate kinase signature 111 130 5.8E-55 T 09-03-2017 RG43_RS25660 173eedbbfd7d0508a102b28323e83932 357 ProSitePatterns PS00618 RecF protein signature 2. 298 316 - T 09-03-2017 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 RG43_RS25660 173eedbbfd7d0508a102b28323e83932 357 ProSitePatterns PS00617 RecF protein signature 1. 117 137 - T 09-03-2017 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 RG43_RS25660 173eedbbfd7d0508a102b28323e83932 357 Gene3D G3DSA:3.40.50.300 230 345 1.9E-37 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25660 173eedbbfd7d0508a102b28323e83932 357 Gene3D G3DSA:3.40.50.300 1 171 1.9E-37 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25660 173eedbbfd7d0508a102b28323e83932 357 SUPERFAMILY SSF52540 1 342 4.02E-40 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25660 173eedbbfd7d0508a102b28323e83932 357 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 357 98.277 T 09-03-2017 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 RG43_RS25660 173eedbbfd7d0508a102b28323e83932 357 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 355 7.4E-141 T 09-03-2017 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 RG43_RS25660 173eedbbfd7d0508a102b28323e83932 357 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 354 1.7E-41 T 09-03-2017 IPR003395 RecF/RecN/SMC, N-terminal RG43_RS06875 7201463f2ac9afc8df98af3c39a9de8f 599 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 308.566 T 09-03-2017 IPR006297 Elongation factor 4 GO:0005525 RG43_RS06875 7201463f2ac9afc8df98af3c39a9de8f 599 Pfam PF03144 Elongation factor Tu domain 2 205 275 2.9E-12 T 09-03-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 RG43_RS06875 7201463f2ac9afc8df98af3c39a9de8f 599 Gene3D G3DSA:3.30.70.240 401 489 3.8E-20 T 09-03-2017 IPR000640 Translation elongation factor EFG, V domain RG43_RS06875 7201463f2ac9afc8df98af3c39a9de8f 599 SUPERFAMILY SSF54980 399 493 3.93E-24 T 09-03-2017 IPR009022 Elongation factor G, III-V domain RG43_RS06875 7201463f2ac9afc8df98af3c39a9de8f 599 Gene3D G3DSA:3.30.70.870 291 369 7.8E-26 T 09-03-2017 RG43_RS06875 7201463f2ac9afc8df98af3c39a9de8f 599 Gene3D G3DSA:3.40.50.300 2 192 9.3E-61 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS06875 7201463f2ac9afc8df98af3c39a9de8f 599 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 4.2E-302 T 09-03-2017 IPR006297 Elongation factor 4 GO:0005525 RG43_RS06875 7201463f2ac9afc8df98af3c39a9de8f 599 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 1.5E-52 T 09-03-2017 RG43_RS06875 7201463f2ac9afc8df98af3c39a9de8f 599 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 8.3E-50 T 09-03-2017 IPR013842 GTP-binding protein LepA, C-terminal RG43_RS06875 7201463f2ac9afc8df98af3c39a9de8f 599 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 172 2.1E-16 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 RG43_RS06875 7201463f2ac9afc8df98af3c39a9de8f 599 Pfam PF00679 Elongation factor G C-terminus 399 482 3.6E-19 T 09-03-2017 IPR000640 Translation elongation factor EFG, V domain RG43_RS06875 7201463f2ac9afc8df98af3c39a9de8f 599 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 09-03-2017 IPR031157 Tr-type G domain, conserved site RG43_RS06875 7201463f2ac9afc8df98af3c39a9de8f 599 PRINTS PR00315 GTP-binding elongation factor signature 90 101 4.0E-14 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RG43_RS06875 7201463f2ac9afc8df98af3c39a9de8f 599 PRINTS PR00315 GTP-binding elongation factor signature 126 135 4.0E-14 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RG43_RS06875 7201463f2ac9afc8df98af3c39a9de8f 599 PRINTS PR00315 GTP-binding elongation factor signature 6 19 4.0E-14 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RG43_RS06875 7201463f2ac9afc8df98af3c39a9de8f 599 PRINTS PR00315 GTP-binding elongation factor signature 74 84 4.0E-14 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RG43_RS06875 7201463f2ac9afc8df98af3c39a9de8f 599 PRINTS PR00315 GTP-binding elongation factor signature 49 57 4.0E-14 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RG43_RS06875 7201463f2ac9afc8df98af3c39a9de8f 599 SUPERFAMILY SSF54980 292 370 2.01E-18 T 09-03-2017 IPR009022 Elongation factor G, III-V domain RG43_RS06875 7201463f2ac9afc8df98af3c39a9de8f 599 Gene3D G3DSA:2.40.30.10 193 289 8.3E-26 T 09-03-2017 RG43_RS06875 7201463f2ac9afc8df98af3c39a9de8f 599 SUPERFAMILY SSF52540 2 235 4.65E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS08690 5c29ec60c6a9867d412a583a849e680f 890 SUPERFAMILY SSF55874 517 677 6.3E-14 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS08690 5c29ec60c6a9867d412a583a849e680f 890 Pfam PF01627 Hpt domain 811 868 3.2E-10 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RG43_RS08690 5c29ec60c6a9867d412a583a849e680f 890 Gene3D G3DSA:1.20.120.160 776 889 6.3E-36 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RG43_RS08690 5c29ec60c6a9867d412a583a849e680f 890 SMART SM00387 565 678 6.6E-7 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS08690 5c29ec60c6a9867d412a583a849e680f 890 Pfam PF16359 RcsD-ABL domain 688 789 2.3E-39 T 09-03-2017 IPR032306 Phosphotransferase RcsD, RcsD-ABL domain RG43_RS08690 5c29ec60c6a9867d412a583a849e680f 890 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 565 675 6.8E-10 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS08690 5c29ec60c6a9867d412a583a849e680f 890 SUPERFAMILY SSF47226 803 889 1.7E-21 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RG43_RS08690 5c29ec60c6a9867d412a583a849e680f 890 Gene3D G3DSA:3.30.565.10 523 677 2.1E-16 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS08690 5c29ec60c6a9867d412a583a849e680f 890 Hamap MF_00980 Phosphotransferase RcsD [rcsD]. 15 890 24.811 T 09-03-2017 IPR030861 Phosphotransferase RcsD GO:0000160|GO:0005887|GO:0009927 RG43_RS10850 c0e556ba2e9820fc09c4073d16068d21 266 SMART SM00079 42 262 7.5E-5 T 09-03-2017 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 RG43_RS10850 c0e556ba2e9820fc09c4073d16068d21 266 SUPERFAMILY SSF53850 14 264 1.66E-76 T 09-03-2017 RG43_RS10850 c0e556ba2e9820fc09c4073d16068d21 266 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 65 78 - T 09-03-2017 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 RG43_RS10850 c0e556ba2e9820fc09c4073d16068d21 266 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 261 1.3E-71 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RG43_RS10850 c0e556ba2e9820fc09c4073d16068d21 266 Gene3D G3DSA:3.40.190.10 223 265 9.2E-47 T 09-03-2017 RG43_RS10850 c0e556ba2e9820fc09c4073d16068d21 266 Gene3D G3DSA:3.40.190.10 38 119 9.2E-47 T 09-03-2017 RG43_RS10850 c0e556ba2e9820fc09c4073d16068d21 266 Gene3D G3DSA:3.40.190.10 120 222 4.1E-33 T 09-03-2017 RG43_RS10850 c0e556ba2e9820fc09c4073d16068d21 266 SMART SM00062 42 263 5.8E-88 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RG43_RS01265 44057dd767bd26c6d034b9893c6d33b0 385 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 36 369 2.5E-80 T 09-03-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RG43_RS01265 44057dd767bd26c6d034b9893c6d33b0 385 Gene3D G3DSA:2.40.50.100 169 203 5.7E-22 T 09-03-2017 RG43_RS01265 44057dd767bd26c6d034b9893c6d33b0 385 Gene3D G3DSA:2.40.50.100 61 94 5.7E-22 T 09-03-2017 RG43_RS01265 44057dd767bd26c6d034b9893c6d33b0 385 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 289 2.9E-17 T 09-03-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RG43_RS01265 44057dd767bd26c6d034b9893c6d33b0 385 SUPERFAMILY SSF111369 50 296 5.75E-81 T 09-03-2017 RG43_RS01265 44057dd767bd26c6d034b9893c6d33b0 385 Pfam PF00529 HlyD membrane-fusion protein of T1SS 35 356 1.3E-9 T 09-03-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RG43_RS08930 616d688b3830e44dba8c06d91d6ad87a 488 SUPERFAMILY SSF51735 5 281 6.3E-101 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS08930 616d688b3830e44dba8c06d91d6ad87a 488 SUPERFAMILY SSF48179 283 484 6.46E-65 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RG43_RS08930 616d688b3830e44dba8c06d91d6ad87a 488 Gene3D G3DSA:3.40.50.720 8 281 3.9E-116 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS08930 616d688b3830e44dba8c06d91d6ad87a 488 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 26 188 1.5E-53 T 09-03-2017 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 RG43_RS08930 616d688b3830e44dba8c06d91d6ad87a 488 PRINTS PR00084 Mannitol dehydrogenase signature 248 263 3.3E-22 T 09-03-2017 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 RG43_RS08930 616d688b3830e44dba8c06d91d6ad87a 488 PRINTS PR00084 Mannitol dehydrogenase signature 218 231 3.3E-22 T 09-03-2017 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 RG43_RS08930 616d688b3830e44dba8c06d91d6ad87a 488 PRINTS PR00084 Mannitol dehydrogenase signature 27 37 3.3E-22 T 09-03-2017 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 RG43_RS08930 616d688b3830e44dba8c06d91d6ad87a 488 PRINTS PR00084 Mannitol dehydrogenase signature 179 192 3.3E-22 T 09-03-2017 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 RG43_RS08930 616d688b3830e44dba8c06d91d6ad87a 488 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 218 230 - T 09-03-2017 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 RG43_RS08930 616d688b3830e44dba8c06d91d6ad87a 488 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 216 462 5.4E-101 T 09-03-2017 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 RG43_RS08930 616d688b3830e44dba8c06d91d6ad87a 488 Gene3D G3DSA:1.10.1040.10 282 485 5.5E-74 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RG43_RS00910 3cbc160a899eba35c3baa2e4a7fec670 330 SUPERFAMILY SSF53822 24 318 2.19E-72 T 09-03-2017 IPR028082 Periplasmic binding protein-like I RG43_RS00910 3cbc160a899eba35c3baa2e4a7fec670 330 TIGRFAM TIGR02634 xylF: D-xylose ABC transporter, D-xylose-binding protein 28 330 1.4E-167 T 09-03-2017 IPR013456 D-xylose ABC transporter, substrate-binding protein GO:0015753|GO:0048029 RG43_RS00910 3cbc160a899eba35c3baa2e4a7fec670 330 Gene3D G3DSA:3.40.50.2300 25 142 1.8E-35 T 09-03-2017 RG43_RS00910 3cbc160a899eba35c3baa2e4a7fec670 330 Pfam PF13407 Periplasmic binding protein domain 38 286 6.2E-62 T 09-03-2017 IPR025997 Periplasmic binding protein RG43_RS00910 3cbc160a899eba35c3baa2e4a7fec670 330 Gene3D G3DSA:3.40.50.2300 143 317 1.6E-46 T 09-03-2017 RG43_RS07610 10f1a1a47a2b2b016072c5e3bb34b0ad 277 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 9 271 1.7E-113 T 09-03-2017 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 RG43_RS07610 10f1a1a47a2b2b016072c5e3bb34b0ad 277 Gene3D G3DSA:1.10.3720.10 19 273 8.7E-55 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS07610 10f1a1a47a2b2b016072c5e3bb34b0ad 277 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 5 269 5.8E-116 T 09-03-2017 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 RG43_RS07610 10f1a1a47a2b2b016072c5e3bb34b0ad 277 SUPERFAMILY SSF161098 16 264 1.21E-57 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS07610 10f1a1a47a2b2b016072c5e3bb34b0ad 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 274 3.0E-34 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS12275 12195d8439626f8b7cb419d14e841370 700 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 228 685 2.7E-69 T 09-03-2017 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 RG43_RS12275 12195d8439626f8b7cb419d14e841370 700 Gene3D G3DSA:3.60.9.10 3 209 1.1E-79 T 09-03-2017 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 RG43_RS12275 12195d8439626f8b7cb419d14e841370 700 SUPERFAMILY SSF48310 212 699 2.22E-77 T 09-03-2017 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 RG43_RS12275 12195d8439626f8b7cb419d14e841370 700 Gene3D G3DSA:1.10.599.10 443 687 8.3E-66 T 09-03-2017 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 GO:0016625|GO:0051536|GO:0055114 KEGG: 00030+1.2.7.5 RG43_RS12275 12195d8439626f8b7cb419d14e841370 700 SUPERFAMILY SSF56228 3 210 1.31E-61 T 09-03-2017 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 RG43_RS12275 12195d8439626f8b7cb419d14e841370 700 Gene3D G3DSA:1.10.569.10 296 442 1.4E-5 T 09-03-2017 IPR013984 Aldehyde ferredoxin oxidoreductase, domain 2 RG43_RS12275 12195d8439626f8b7cb419d14e841370 700 SMART SM00790 5 206 3.6E-86 T 09-03-2017 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 RG43_RS12275 12195d8439626f8b7cb419d14e841370 700 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 7 205 2.2E-67 T 09-03-2017 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 RG43_RS20965 6661e42b76599483a127a1fe3c7d0752 887 PIRSF PIRSF000156 1 887 0.0 T 09-03-2017 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 RG43_RS20965 6661e42b76599483a127a1fe3c7d0752 887 Gene3D G3DSA:3.40.50.970 473 705 1.5E-120 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS20965 6661e42b76599483a127a1fe3c7d0752 887 Gene3D G3DSA:3.40.50.920 707 885 3.5E-77 T 09-03-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RG43_RS20965 6661e42b76599483a127a1fe3c7d0752 887 SUPERFAMILY SSF52518 474 701 7.53E-99 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS20965 6661e42b76599483a127a1fe3c7d0752 887 SUPERFAMILY SSF52518 58 469 4.42E-145 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS20965 6661e42b76599483a127a1fe3c7d0752 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 106 296 1.2E-9 T 09-03-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 RG43_RS20965 6661e42b76599483a127a1fe3c7d0752 887 SUPERFAMILY SSF52922 702 885 1.12E-64 T 09-03-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RG43_RS20965 6661e42b76599483a127a1fe3c7d0752 887 Gene3D G3DSA:3.40.50.970 59 469 1.4E-158 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS20965 6661e42b76599483a127a1fe3c7d0752 887 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 5 886 0.0 T 09-03-2017 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 RG43_RS05235 902abf82badec555f56a9262b2b846d0 441 Gene3D G3DSA:3.90.230.10 182 437 7.1E-90 T 09-03-2017 IPR000994 Peptidase M24, structural domain RG43_RS05235 902abf82badec555f56a9262b2b846d0 441 SMART SM01011 4 139 3.8E-59 T 09-03-2017 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 RG43_RS05235 902abf82badec555f56a9262b2b846d0 441 Gene3D G3DSA:3.40.350.10 4 181 1.4E-55 T 09-03-2017 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal RG43_RS05235 902abf82badec555f56a9262b2b846d0 441 SUPERFAMILY SSF53092 4 177 6.8E-54 T 09-03-2017 IPR028980 Creatinase/Aminopeptidase P, N-terminal RG43_RS05235 902abf82badec555f56a9262b2b846d0 441 Pfam PF05195 Aminopeptidase P, N-terminal domain 9 129 1.0E-36 T 09-03-2017 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 RG43_RS05235 902abf82badec555f56a9262b2b846d0 441 SUPERFAMILY SSF55920 178 436 2.75E-89 T 09-03-2017 IPR000994 Peptidase M24, structural domain RG43_RS05235 902abf82badec555f56a9262b2b846d0 441 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 351 363 - T 09-03-2017 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site RG43_RS05235 902abf82badec555f56a9262b2b846d0 441 PRINTS PR00599 Methionine aminopeptidase-1 signature 373 385 1.1E-5 T 09-03-2017 IPR001714 Peptidase M24, methionine aminopeptidase RG43_RS05235 902abf82badec555f56a9262b2b846d0 441 PRINTS PR00599 Methionine aminopeptidase-1 signature 256 272 1.1E-5 T 09-03-2017 IPR001714 Peptidase M24, methionine aminopeptidase RG43_RS05235 902abf82badec555f56a9262b2b846d0 441 Pfam PF00557 Metallopeptidase family M24 185 414 8.6E-66 T 09-03-2017 IPR000994 Peptidase M24, structural domain RG43_RS12630 c0afee76f8875a61e191597546fecbff 239 SMART SM00448 2 112 4.4E-29 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS12630 c0afee76f8875a61e191597546fecbff 239 SUPERFAMILY SSF52172 2 120 3.13E-29 T 09-03-2017 IPR011006 CheY-like superfamily RG43_RS12630 c0afee76f8875a61e191597546fecbff 239 Gene3D G3DSA:1.10.10.10 137 235 7.7E-29 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS12630 c0afee76f8875a61e191597546fecbff 239 SUPERFAMILY SSF46894 139 234 1.5E-25 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RG43_RS12630 c0afee76f8875a61e191597546fecbff 239 Gene3D G3DSA:3.40.50.2300 2 135 4.8E-29 T 09-03-2017 RG43_RS12630 c0afee76f8875a61e191597546fecbff 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 233 7.2E-21 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RG43_RS12630 c0afee76f8875a61e191597546fecbff 239 Pfam PF00072 Response regulator receiver domain 4 112 1.6E-19 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS12630 c0afee76f8875a61e191597546fecbff 239 SMART SM00862 157 233 2.0E-19 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RG43_RS22990 0544ae6ac6e7dd6ca5dc2aa8872eecc9 302 Gene3D G3DSA:2.60.120.10 35 96 2.6E-6 T 09-03-2017 IPR014710 RmlC-like jelly roll fold RG43_RS22990 0544ae6ac6e7dd6ca5dc2aa8872eecc9 302 Gene3D G3DSA:1.10.10.60 192 243 8.2E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS22990 0544ae6ac6e7dd6ca5dc2aa8872eecc9 302 SMART SM00342 207 290 1.1E-27 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS22990 0544ae6ac6e7dd6ca5dc2aa8872eecc9 302 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 244 286 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RG43_RS22990 0544ae6ac6e7dd6ca5dc2aa8872eecc9 302 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 274 290 1.3E-5 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RG43_RS22990 0544ae6ac6e7dd6ca5dc2aa8872eecc9 302 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 259 274 1.3E-5 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RG43_RS22990 0544ae6ac6e7dd6ca5dc2aa8872eecc9 302 Pfam PF12833 Helix-turn-helix domain 214 291 8.1E-19 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS22990 0544ae6ac6e7dd6ca5dc2aa8872eecc9 302 SUPERFAMILY SSF51182 33 105 6.17E-7 T 09-03-2017 IPR011051 RmlC-like cupin domain RG43_RS22990 0544ae6ac6e7dd6ca5dc2aa8872eecc9 302 SUPERFAMILY SSF46689 243 291 8.51E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS22990 0544ae6ac6e7dd6ca5dc2aa8872eecc9 302 Gene3D G3DSA:1.10.10.60 244 292 4.3E-17 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS22990 0544ae6ac6e7dd6ca5dc2aa8872eecc9 302 SUPERFAMILY SSF47454 129 186 6.8E-12 T 09-03-2017 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain GO:0003677|GO:0006355 RG43_RS17455 c75950abd5ec446e3b94c6ef99829bad 348 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 183 339 3.0E-46 T 09-03-2017 IPR017516 AbrB duplication RG43_RS17455 c75950abd5ec446e3b94c6ef99829bad 348 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 6 160 1.0E-40 T 09-03-2017 IPR017516 AbrB duplication RG43_RS17455 c75950abd5ec446e3b94c6ef99829bad 348 Pfam PF05145 Putative ammonia monooxygenase 29 339 2.1E-97 T 09-03-2017 IPR007820 AbrB family GO:0010468|GO:0016021 RG43_RS17455 c75950abd5ec446e3b94c6ef99829bad 348 PIRSF PIRSF038991 1 348 4.9E-99 T 09-03-2017 IPR007820 AbrB family GO:0010468|GO:0016021 RG43_RS22935 c829b9724af43c60b70e0f10795110ed 90 SUPERFAMILY SSF55729 2 88 4.58E-23 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS22935 c829b9724af43c60b70e0f10795110ed 90 Gene3D G3DSA:3.40.630.30 1 89 2.6E-33 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS22935 c829b9724af43c60b70e0f10795110ed 90 Pfam PF14542 GCN5-related N-acetyl-transferase 9 88 1.1E-21 T 09-03-2017 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase RG43_RS22695 73af5aae8aa7d2fbae6fc55bf613a82d 379 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 14 348 4.9E-154 T 09-03-2017 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 RG43_RS22695 73af5aae8aa7d2fbae6fc55bf613a82d 379 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 193 204 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS22695 73af5aae8aa7d2fbae6fc55bf613a82d 379 Pfam PF13484 4Fe-4S double cluster binding domain 193 256 3.7E-19 T 09-03-2017 RG43_RS22695 73af5aae8aa7d2fbae6fc55bf613a82d 379 Pfam PF08331 Domain of unknown function (DUF1730) 62 140 1.2E-23 T 09-03-2017 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 RG43_RS22695 73af5aae8aa7d2fbae6fc55bf613a82d 379 Gene3D G3DSA:3.30.70.20 190 257 5.1E-6 T 09-03-2017 RG43_RS22695 73af5aae8aa7d2fbae6fc55bf613a82d 379 SUPERFAMILY SSF46548 139 256 5.23E-19 T 09-03-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 RG43_RS22695 73af5aae8aa7d2fbae6fc55bf613a82d 379 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 7 315 51.409 T 09-03-2017 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 RG43_RS01545 aa3d7fd6e3ec463f7a9945f4ddf55f15 732 SUPERFAMILY SSF56784 491 726 1.3E-50 T 09-03-2017 IPR023214 HAD-like domain RG43_RS01545 aa3d7fd6e3ec463f7a9945f4ddf55f15 732 SUPERFAMILY SSF56784 433 452 1.3E-50 T 09-03-2017 IPR023214 HAD-like domain RG43_RS01545 aa3d7fd6e3ec463f7a9945f4ddf55f15 732 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 183 728 2.3E-181 T 09-03-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 RG43_RS01545 aa3d7fd6e3ec463f7a9945f4ddf55f15 732 SUPERFAMILY SSF81653 236 333 1.26E-21 T 09-03-2017 RG43_RS01545 aa3d7fd6e3ec463f7a9945f4ddf55f15 732 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 436 442 - T 09-03-2017 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 RG43_RS01545 aa3d7fd6e3ec463f7a9945f4ddf55f15 732 Gene3D G3DSA:3.30.70.100 49 112 8.9E-20 T 09-03-2017 RG43_RS01545 aa3d7fd6e3ec463f7a9945f4ddf55f15 732 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 206 705 6.4E-79 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 RG43_RS01545 aa3d7fd6e3ec463f7a9945f4ddf55f15 732 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 626 642 1.4E-5 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 RG43_RS01545 aa3d7fd6e3ec463f7a9945f4ddf55f15 732 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 599 615 1.4E-5 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 RG43_RS01545 aa3d7fd6e3ec463f7a9945f4ddf55f15 732 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 657 682 1.4E-5 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 RG43_RS01545 aa3d7fd6e3ec463f7a9945f4ddf55f15 732 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 575 585 4.3E-28 T 09-03-2017 RG43_RS01545 aa3d7fd6e3ec463f7a9945f4ddf55f15 732 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 283 297 4.3E-28 T 09-03-2017 RG43_RS01545 aa3d7fd6e3ec463f7a9945f4ddf55f15 732 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 553 564 4.3E-28 T 09-03-2017 RG43_RS01545 aa3d7fd6e3ec463f7a9945f4ddf55f15 732 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 434 448 4.3E-28 T 09-03-2017 RG43_RS01545 aa3d7fd6e3ec463f7a9945f4ddf55f15 732 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 649 661 4.3E-28 T 09-03-2017 RG43_RS01545 aa3d7fd6e3ec463f7a9945f4ddf55f15 732 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 626 645 4.3E-28 T 09-03-2017 RG43_RS01545 aa3d7fd6e3ec463f7a9945f4ddf55f15 732 Pfam PF00122 E1-E2 ATPase 204 425 1.3E-59 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 RG43_RS01545 aa3d7fd6e3ec463f7a9945f4ddf55f15 732 ProSitePatterns PS01047 Heavy-metal-associated domain. 54 83 - T 09-03-2017 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 RG43_RS01545 aa3d7fd6e3ec463f7a9945f4ddf55f15 732 Gene3D G3DSA:2.70.150.10 186 334 2.7E-25 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 RG43_RS01545 aa3d7fd6e3ec463f7a9945f4ddf55f15 732 Gene3D G3DSA:3.40.50.1000 407 447 2.2E-41 T 09-03-2017 IPR023214 HAD-like domain RG43_RS01545 aa3d7fd6e3ec463f7a9945f4ddf55f15 732 Gene3D G3DSA:3.40.50.1000 556 692 2.2E-41 T 09-03-2017 IPR023214 HAD-like domain RG43_RS01545 aa3d7fd6e3ec463f7a9945f4ddf55f15 732 Pfam PF00403 Heavy-metal-associated domain 53 109 7.5E-12 T 09-03-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RG43_RS01545 aa3d7fd6e3ec463f7a9945f4ddf55f15 732 Pfam PF00702 haloacid dehalogenase-like hydrolase 433 639 8.0E-36 T 09-03-2017 RG43_RS01545 aa3d7fd6e3ec463f7a9945f4ddf55f15 732 Gene3D G3DSA:3.40.1110.10 448 555 6.2E-22 T 09-03-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 RG43_RS01545 aa3d7fd6e3ec463f7a9945f4ddf55f15 732 SUPERFAMILY SSF81665 675 714 4.58E-18 T 09-03-2017 RG43_RS01545 aa3d7fd6e3ec463f7a9945f4ddf55f15 732 SUPERFAMILY SSF81665 334 428 4.58E-18 T 09-03-2017 RG43_RS01545 aa3d7fd6e3ec463f7a9945f4ddf55f15 732 SUPERFAMILY SSF81665 186 237 4.58E-18 T 09-03-2017 RG43_RS01545 aa3d7fd6e3ec463f7a9945f4ddf55f15 732 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 183 730 1.2E-164 T 09-03-2017 RG43_RS01545 aa3d7fd6e3ec463f7a9945f4ddf55f15 732 SUPERFAMILY SSF55008 49 111 4.06E-16 T 09-03-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RG43_RS10500 6484dff595aa88abbae38bdb6c0ad768 247 SMART SM00232 1 119 0.0037 T 09-03-2017 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 RG43_RS10500 6484dff595aa88abbae38bdb6c0ad768 247 Pfam PF14464 Prokaryotic homologs of the JAB domain 3 101 1.4E-13 T 09-03-2017 IPR028090 JAB domain, prokaryotic RG43_RS10500 6484dff595aa88abbae38bdb6c0ad768 247 Gene3D G3DSA:3.90.1720.10 112 227 8.6E-19 T 09-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain RG43_RS10500 6484dff595aa88abbae38bdb6c0ad768 247 Pfam PF00877 NlpC/P60 family 111 223 8.7E-14 T 09-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain RG43_RS10500 6484dff595aa88abbae38bdb6c0ad768 247 SUPERFAMILY SSF54001 100 227 2.65E-18 T 09-03-2017 RG43_RS10500 6484dff595aa88abbae38bdb6c0ad768 247 Gene3D G3DSA:3.40.140.10 5 111 1.9E-17 T 09-03-2017 RG43_RS10500 6484dff595aa88abbae38bdb6c0ad768 247 SUPERFAMILY SSF102712 6 97 2.88E-16 T 09-03-2017 RG43_RS24955 a8c4244a3cd42d3c49d5aa37dc6f2dae 502 Pfam PF02378 Phosphotransferase system, EIIC 18 328 8.9E-74 T 09-03-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 RG43_RS24955 a8c4244a3cd42d3c49d5aa37dc6f2dae 502 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 427 444 - T 09-03-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 RG43_RS24955 a8c4244a3cd42d3c49d5aa37dc6f2dae 502 SUPERFAMILY SSF55604 416 488 6.41E-20 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RG43_RS24955 a8c4244a3cd42d3c49d5aa37dc6f2dae 502 Pfam PF00367 phosphotransferase system, EIIB 417 449 3.4E-15 T 09-03-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 RG43_RS24955 a8c4244a3cd42d3c49d5aa37dc6f2dae 502 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 11 489 5.4E-182 T 09-03-2017 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0015758|GO:0016021 RG43_RS24955 a8c4244a3cd42d3c49d5aa37dc6f2dae 502 Gene3D G3DSA:3.30.1360.60 412 488 2.8E-25 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RG43_RS24955 a8c4244a3cd42d3c49d5aa37dc6f2dae 502 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 389 474 9.3E-22 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RG43_RS07060 0f7074b75c2641c88c49fb9193804c7a 400 Gene3D G3DSA:3.30.390.30 318 400 3.1E-26 T 09-03-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RG43_RS07060 0f7074b75c2641c88c49fb9193804c7a 400 Pfam PF14759 Reductase C-terminal 318 400 6.7E-22 T 09-03-2017 IPR028202 Reductase, C-terminal RG43_RS07060 0f7074b75c2641c88c49fb9193804c7a 400 SUPERFAMILY SSF51905 1 308 1.59E-39 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS07060 0f7074b75c2641c88c49fb9193804c7a 400 Gene3D G3DSA:3.50.50.60 2 107 6.4E-28 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS07060 0f7074b75c2641c88c49fb9193804c7a 400 SUPERFAMILY SSF55424 311 400 2.2E-23 T 09-03-2017 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RG43_RS07060 0f7074b75c2641c88c49fb9193804c7a 400 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 299 6.2E-52 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS07060 0f7074b75c2641c88c49fb9193804c7a 400 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 146 171 3.8E-14 T 09-03-2017 RG43_RS07060 0f7074b75c2641c88c49fb9193804c7a 400 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 231 245 3.8E-14 T 09-03-2017 RG43_RS07060 0f7074b75c2641c88c49fb9193804c7a 400 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 3.8E-14 T 09-03-2017 RG43_RS07060 0f7074b75c2641c88c49fb9193804c7a 400 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 270 277 3.8E-14 T 09-03-2017 RG43_RS07060 0f7074b75c2641c88c49fb9193804c7a 400 Hamap MF_01651 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin--NAD(+) reductase component [hcaD]. 1 396 68.983 T 09-03-2017 IPR023744 3-phenylpropionate/cinnamic acid dioxygenase, ferredoxin--NAD(+) reductase subunit GO:0008860|GO:0055114 KEGG: 00071+1.18.1.3 RG43_RS07060 0f7074b75c2641c88c49fb9193804c7a 400 Gene3D G3DSA:3.50.50.60 108 308 3.2E-42 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS07060 0f7074b75c2641c88c49fb9193804c7a 400 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 1.6E-21 T 09-03-2017 RG43_RS07060 0f7074b75c2641c88c49fb9193804c7a 400 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 101 119 1.6E-21 T 09-03-2017 RG43_RS07060 0f7074b75c2641c88c49fb9193804c7a 400 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.6E-21 T 09-03-2017 RG43_RS07060 0f7074b75c2641c88c49fb9193804c7a 400 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 230 246 1.6E-21 T 09-03-2017 RG43_RS07060 0f7074b75c2641c88c49fb9193804c7a 400 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 255 277 1.6E-21 T 09-03-2017 RG43_RS04340 dccefc91c8dbde6227ec0ed13cb86468 390 Gene3D G3DSA:3.40.640.10 64 276 2.2E-82 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS04340 dccefc91c8dbde6227ec0ed13cb86468 390 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 09-03-2017 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 RG43_RS04340 dccefc91c8dbde6227ec0ed13cb86468 390 Pfam PF00155 Aminotransferase class I and II 44 384 9.2E-55 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RG43_RS04340 dccefc91c8dbde6227ec0ed13cb86468 390 SUPERFAMILY SSF53383 8 387 1.33E-98 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS04340 dccefc91c8dbde6227ec0ed13cb86468 390 Gene3D G3DSA:3.90.1150.10 277 387 1.5E-25 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RG43_RS26715 dccefc91c8dbde6227ec0ed13cb86468 390 Gene3D G3DSA:3.40.640.10 64 276 2.2E-82 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS26715 dccefc91c8dbde6227ec0ed13cb86468 390 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 09-03-2017 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 RG43_RS26715 dccefc91c8dbde6227ec0ed13cb86468 390 Pfam PF00155 Aminotransferase class I and II 44 384 9.2E-55 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RG43_RS26715 dccefc91c8dbde6227ec0ed13cb86468 390 SUPERFAMILY SSF53383 8 387 1.33E-98 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS26715 dccefc91c8dbde6227ec0ed13cb86468 390 Gene3D G3DSA:3.90.1150.10 277 387 1.5E-25 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RG43_RS02475 21ff7290df0255854c7a7e36a8c2ec66 206 SMART SM00363 96 160 8.2E-21 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 RG43_RS02475 21ff7290df0255854c7a7e36a8c2ec66 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 09-03-2017 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02475 21ff7290df0255854c7a7e36a8c2ec66 206 SMART SM01390 3 95 1.3E-49 T 09-03-2017 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 RG43_RS02475 21ff7290df0255854c7a7e36a8c2ec66 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 2.4E-87 T 09-03-2017 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 RG43_RS02475 21ff7290df0255854c7a7e36a8c2ec66 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 1.0E-30 T 09-03-2017 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 RG43_RS02475 21ff7290df0255854c7a7e36a8c2ec66 206 SUPERFAMILY SSF55174 3 206 1.96E-73 T 09-03-2017 RG43_RS02475 21ff7290df0255854c7a7e36a8c2ec66 206 Pfam PF01479 S4 domain 97 143 7.1E-19 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 RG43_RS02475 21ff7290df0255854c7a7e36a8c2ec66 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.44 T 09-03-2017 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 RG43_RS02475 21ff7290df0255854c7a7e36a8c2ec66 206 Gene3D G3DSA:3.10.290.10 102 190 1.8E-33 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 RG43_RS02475 21ff7290df0255854c7a7e36a8c2ec66 206 Gene3D G3DSA:1.10.1050.10 1 101 2.9E-41 T 09-03-2017 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 RG43_RS06660 1b64f96e17b3232b18d4f8cfe5373512 82 SUPERFAMILY SSF54565 1 76 5.89E-29 T 09-03-2017 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS06660 1b64f96e17b3232b18d4f8cfe5373512 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 09-03-2017 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS06660 1b64f96e17b3232b18d4f8cfe5373512 82 Pfam PF00886 Ribosomal protein S16 8 68 1.1E-24 T 09-03-2017 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS06660 1b64f96e17b3232b18d4f8cfe5373512 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 78 1.3E-28 T 09-03-2017 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS06660 1b64f96e17b3232b18d4f8cfe5373512 82 Gene3D G3DSA:3.30.1320.10 1 78 1.1E-33 T 09-03-2017 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS06660 1b64f96e17b3232b18d4f8cfe5373512 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 24.165 T 09-03-2017 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS21225 83ca0f6b434d115c2d3a74bfc12a9eda 292 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 261 277 4.2E-6 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RG43_RS21225 83ca0f6b434d115c2d3a74bfc12a9eda 292 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 246 261 4.2E-6 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RG43_RS21225 83ca0f6b434d115c2d3a74bfc12a9eda 292 SMART SM00342 194 277 7.6E-32 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS21225 83ca0f6b434d115c2d3a74bfc12a9eda 292 Gene3D G3DSA:1.10.10.60 173 231 3.4E-14 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS21225 83ca0f6b434d115c2d3a74bfc12a9eda 292 Gene3D G3DSA:2.60.120.280 8 168 4.4E-51 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RG43_RS21225 83ca0f6b434d115c2d3a74bfc12a9eda 292 Pfam PF12833 Helix-turn-helix domain 200 278 4.8E-20 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS21225 83ca0f6b434d115c2d3a74bfc12a9eda 292 SUPERFAMILY SSF46689 176 227 4.66E-7 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS21225 83ca0f6b434d115c2d3a74bfc12a9eda 292 SUPERFAMILY SSF46689 231 279 2.2E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS21225 83ca0f6b434d115c2d3a74bfc12a9eda 292 Pfam PF02311 AraC-like ligand binding domain 23 160 8.2E-27 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RG43_RS21225 83ca0f6b434d115c2d3a74bfc12a9eda 292 Gene3D G3DSA:1.10.10.60 232 279 1.0E-16 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS21225 83ca0f6b434d115c2d3a74bfc12a9eda 292 SUPERFAMILY SSF51215 8 163 3.66E-39 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RG43_RS21225 83ca0f6b434d115c2d3a74bfc12a9eda 292 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 231 273 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RG43_RS19340 c678b2e2ef27a8d4d4116b059933646d 296 SUPERFAMILY SSF51621 5 288 1.84E-97 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RG43_RS19340 c678b2e2ef27a8d4d4116b059933646d 296 Pfam PF13714 Phosphoenolpyruvate phosphomutase 10 250 1.3E-48 T 09-03-2017 RG43_RS19340 c678b2e2ef27a8d4d4116b059933646d 296 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 4 292 50.397 T 09-03-2017 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 RG43_RS19340 c678b2e2ef27a8d4d4116b059933646d 296 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 7 291 2.2E-137 T 09-03-2017 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 RG43_RS19340 c678b2e2ef27a8d4d4116b059933646d 296 ProSitePatterns PS00161 Isocitrate lyase signature. 121 126 - T 09-03-2017 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 RG43_RS19340 c678b2e2ef27a8d4d4116b059933646d 296 Gene3D G3DSA:3.20.20.60 5 286 3.5E-100 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RG43_RS10985 604c0765b176beef4e9a61fdc0751e12 266 Gene3D G3DSA:3.40.50.1000 15 90 2.2E-44 T 09-03-2017 IPR023214 HAD-like domain RG43_RS10985 604c0765b176beef4e9a61fdc0751e12 266 Gene3D G3DSA:3.40.50.1000 165 257 2.2E-44 T 09-03-2017 IPR023214 HAD-like domain RG43_RS10985 604c0765b176beef4e9a61fdc0751e12 266 SUPERFAMILY SSF56784 17 243 1.63E-39 T 09-03-2017 IPR023214 HAD-like domain RG43_RS10985 604c0765b176beef4e9a61fdc0751e12 266 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 18 213 4.4E-21 T 09-03-2017 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 RG43_RS10985 604c0765b176beef4e9a61fdc0751e12 266 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 12 244 1.1E-91 T 09-03-2017 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 RG43_RS10985 604c0765b176beef4e9a61fdc0751e12 266 Pfam PF02358 Trehalose-phosphatase 18 229 3.2E-56 T 09-03-2017 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 RG43_RS02895 419214eac0e8f1b972f13124ecb2e4d2 1522 Pfam PF04898 Glutamate synthase central domain 493 773 2.7E-105 T 09-03-2017 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 RG43_RS02895 419214eac0e8f1b972f13124ecb2e4d2 1522 Gene3D G3DSA:3.20.20.70 847 1234 9.6E-163 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS02895 419214eac0e8f1b972f13124ecb2e4d2 1522 SUPERFAMILY SSF56235 48 465 3.95E-149 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal RG43_RS02895 419214eac0e8f1b972f13124ecb2e4d2 1522 Pfam PF00310 Glutamine amidotransferases class-II 48 461 1.4E-176 T 09-03-2017 IPR017932 Glutamine amidotransferase type 2 domain RG43_RS02895 419214eac0e8f1b972f13124ecb2e4d2 1522 Gene3D G3DSA:3.60.20.10 48 469 4.0E-171 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal RG43_RS02895 419214eac0e8f1b972f13124ecb2e4d2 1522 Pfam PF01493 GXGXG motif 1272 1455 8.0E-75 T 09-03-2017 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 RG43_RS02895 419214eac0e8f1b972f13124ecb2e4d2 1522 Pfam PF01645 Conserved region in glutamate synthase 829 1192 4.1E-158 T 09-03-2017 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 RG43_RS02895 419214eac0e8f1b972f13124ecb2e4d2 1522 SUPERFAMILY SSF51395 470 1227 1.92E-248 T 09-03-2017 RG43_RS02895 419214eac0e8f1b972f13124ecb2e4d2 1522 Gene3D G3DSA:2.160.20.60 1247 1501 3.5E-97 T 09-03-2017 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 RG43_RS02895 419214eac0e8f1b972f13124ecb2e4d2 1522 Gene3D G3DSA:3.20.20.70 473 812 6.7E-102 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS02895 419214eac0e8f1b972f13124ecb2e4d2 1522 SUPERFAMILY SSF69336 1247 1501 1.57E-88 T 09-03-2017 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 RG43_RS09285 ab31e65b266fa339100054a7716fff8f 224 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 19 141 4.6E-40 T 09-03-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 RG43_RS09285 ab31e65b266fa339100054a7716fff8f 224 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 96 113 - T 09-03-2017 IPR018046 Pili assembly chaperone, conserved site RG43_RS09285 ab31e65b266fa339100054a7716fff8f 224 SUPERFAMILY SSF49584 136 221 1.31E-16 T 09-03-2017 IPR016148 Pili assembly chaperone, C-terminal RG43_RS09285 ab31e65b266fa339100054a7716fff8f 224 SUPERFAMILY SSF49354 15 141 1.86E-39 T 09-03-2017 IPR008962 PapD-like RG43_RS09285 ab31e65b266fa339100054a7716fff8f 224 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 163 219 5.2E-9 T 09-03-2017 IPR016148 Pili assembly chaperone, C-terminal RG43_RS09285 ab31e65b266fa339100054a7716fff8f 224 Gene3D G3DSA:2.60.40.1070 147 220 7.6E-16 T 09-03-2017 IPR016148 Pili assembly chaperone, C-terminal RG43_RS09285 ab31e65b266fa339100054a7716fff8f 224 PRINTS PR00969 Pili chaperone signature 20 29 5.3E-27 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS09285 ab31e65b266fa339100054a7716fff8f 224 PRINTS PR00969 Pili chaperone signature 69 90 5.3E-27 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS09285 ab31e65b266fa339100054a7716fff8f 224 PRINTS PR00969 Pili chaperone signature 158 173 5.3E-27 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS09285 ab31e65b266fa339100054a7716fff8f 224 PRINTS PR00969 Pili chaperone signature 97 114 5.3E-27 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS09285 ab31e65b266fa339100054a7716fff8f 224 PRINTS PR00969 Pili chaperone signature 123 138 5.3E-27 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS09285 ab31e65b266fa339100054a7716fff8f 224 Gene3D G3DSA:2.60.40.360 19 141 1.2E-41 T 09-03-2017 IPR008962 PapD-like RG43_RS20405 64871c5a6662ef9ccf2f4281400ee4cb 81 Pfam PF13708 Domain of unknown function (DUF4942) 1 70 2.3E-16 T 09-03-2017 IPR031339 Domain of unknown function DUF4942 RG43_RS26460 d9c475e1717b436c7c310a65f3f2f4df 349 Gene3D G3DSA:1.10.3470.10 24 347 1.5E-86 T 09-03-2017 IPR029022 ABC transporter, BtuC-like RG43_RS26460 d9c475e1717b436c7c310a65f3f2f4df 349 SUPERFAMILY SSF81345 19 344 1.96E-68 T 09-03-2017 IPR029022 ABC transporter, BtuC-like RG43_RS26460 d9c475e1717b436c7c310a65f3f2f4df 349 Pfam PF01032 FecCD transport family 39 343 5.7E-78 T 09-03-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 RG43_RS04085 d9c475e1717b436c7c310a65f3f2f4df 349 Gene3D G3DSA:1.10.3470.10 24 347 1.5E-86 T 09-03-2017 IPR029022 ABC transporter, BtuC-like RG43_RS04085 d9c475e1717b436c7c310a65f3f2f4df 349 SUPERFAMILY SSF81345 19 344 1.96E-68 T 09-03-2017 IPR029022 ABC transporter, BtuC-like RG43_RS04085 d9c475e1717b436c7c310a65f3f2f4df 349 Pfam PF01032 FecCD transport family 39 343 5.7E-78 T 09-03-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 RG43_RS12665 178bd59e4db9f686a6bf537347b3f52c 462 SUPERFAMILY SSF52467 289 462 1.54E-78 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain RG43_RS12665 178bd59e4db9f686a6bf537347b3f52c 462 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 460 1.9E-200 T 09-03-2017 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 RG43_RS12665 178bd59e4db9f686a6bf537347b3f52c 462 PIRSF PIRSF000204 1 462 5.6E-239 T 09-03-2017 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 RG43_RS12665 178bd59e4db9f686a6bf537347b3f52c 462 Gene3D G3DSA:3.40.50.1220 288 462 1.6E-92 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain RG43_RS16405 3f7e263f99a4ffe3897b2af8a601fcd9 410 SUPERFAMILY SSF103473 21 399 1.83E-45 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS16405 3f7e263f99a4ffe3897b2af8a601fcd9 410 Pfam PF07690 Major Facilitator Superfamily 27 361 2.2E-28 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS16405 3f7e263f99a4ffe3897b2af8a601fcd9 410 ProSitePatterns PS00216 Sugar transport proteins signature 1. 72 88 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RG43_RS16405 3f7e263f99a4ffe3897b2af8a601fcd9 410 Gene3D G3DSA:1.20.1250.20 22 202 1.2E-23 T 09-03-2017 RG43_RS02855 52732e0af89f005938e31cc2e03cae41 263 SMART SM00895 123 247 1.0E-16 T 09-03-2017 IPR011711 GntR, C-terminal RG43_RS02855 52732e0af89f005938e31cc2e03cae41 263 Pfam PF07729 FCD domain 125 246 3.4E-20 T 09-03-2017 IPR011711 GntR, C-terminal RG43_RS02855 52732e0af89f005938e31cc2e03cae41 263 SUPERFAMILY SSF48008 120 252 4.18E-23 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal RG43_RS02855 52732e0af89f005938e31cc2e03cae41 263 SMART SM00345 36 95 2.3E-22 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS02855 52732e0af89f005938e31cc2e03cae41 263 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 69 85 5.6E-9 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS02855 52732e0af89f005938e31cc2e03cae41 263 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 69 5.6E-9 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS02855 52732e0af89f005938e31cc2e03cae41 263 Hamap MF_01236 Transcriptional regulator NanR [nanR]. 4 263 59.512 T 09-03-2017 IPR023730 Transcriptional regulator NanR RG43_RS02855 52732e0af89f005938e31cc2e03cae41 263 SUPERFAMILY SSF46785 28 99 3.8E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS02855 52732e0af89f005938e31cc2e03cae41 263 Gene3D G3DSA:1.10.10.10 29 102 2.8E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS02855 52732e0af89f005938e31cc2e03cae41 263 Gene3D G3DSA:1.20.120.530 117 258 1.5E-24 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal RG43_RS02855 52732e0af89f005938e31cc2e03cae41 263 Pfam PF00392 Bacterial regulatory proteins, gntR family 32 95 9.5E-21 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS20770 73d2dc317b70bb109d8a285c529455d8 809 SMART SM00487 5 186 7.8E-21 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain RG43_RS20770 73d2dc317b70bb109d8a285c529455d8 809 SMART SM00847 388 476 8.2E-11 T 09-03-2017 IPR007502 Helicase-associated domain GO:0004386 RG43_RS20770 73d2dc317b70bb109d8a285c529455d8 809 Pfam PF00270 DEAD/DEAH box helicase 20 163 6.9E-10 T 09-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RG43_RS20770 73d2dc317b70bb109d8a285c529455d8 809 Pfam PF04408 Helicase associated domain (HA2) 389 444 2.1E-8 T 09-03-2017 IPR007502 Helicase-associated domain GO:0004386 RG43_RS20770 73d2dc317b70bb109d8a285c529455d8 809 Pfam PF00271 Helicase conserved C-terminal domain 206 327 6.7E-10 T 09-03-2017 IPR001650 Helicase, C-terminal RG43_RS20770 73d2dc317b70bb109d8a285c529455d8 809 Gene3D G3DSA:3.40.50.300 185 344 8.2E-14 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS20770 73d2dc317b70bb109d8a285c529455d8 809 Pfam PF08482 ATP-dependent helicase C-terminal 664 796 4.9E-54 T 09-03-2017 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal RG43_RS20770 73d2dc317b70bb109d8a285c529455d8 809 SMART SM00490 230 328 2.2E-12 T 09-03-2017 IPR001650 Helicase, C-terminal RG43_RS20770 73d2dc317b70bb109d8a285c529455d8 809 SUPERFAMILY SSF52540 12 429 1.05E-50 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS20770 73d2dc317b70bb109d8a285c529455d8 809 PIRSF PIRSF005496 1 809 0.0 T 09-03-2017 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type RG43_RS20770 73d2dc317b70bb109d8a285c529455d8 809 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 808 0.0 T 09-03-2017 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type RG43_RS20770 73d2dc317b70bb109d8a285c529455d8 809 Gene3D G3DSA:3.40.50.300 3 160 1.7E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS21455 be19d0695a55a5c74cc4b9f358977ab7 301 Gene3D G3DSA:1.10.10.10 5 85 3.6E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS21455 be19d0695a55a5c74cc4b9f358977ab7 301 Gene3D G3DSA:3.40.190.10 99 229 2.6E-7 T 09-03-2017 RG43_RS21455 be19d0695a55a5c74cc4b9f358977ab7 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.2E-15 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS21455 be19d0695a55a5c74cc4b9f358977ab7 301 SUPERFAMILY SSF53850 92 289 1.9E-27 T 09-03-2017 RG43_RS21455 be19d0695a55a5c74cc4b9f358977ab7 301 SUPERFAMILY SSF46785 1 87 4.67E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS21455 be19d0695a55a5c74cc4b9f358977ab7 301 Pfam PF03466 LysR substrate binding domain 98 286 5.4E-12 T 09-03-2017 IPR005119 LysR, substrate-binding RG43_RS24330 e59286296f798f34ebca4a335b2fef6d 169 Pfam PF05926 Phage head completion protein (GPL) 31 169 2.3E-52 T 09-03-2017 IPR009225 Bacteriophage head completion protein GpL GO:0019069 RG43_RS04960 14e18d9d878b5c471ca448b933d46eef 378 Pfam PF04055 Radical SAM superfamily 11 177 2.2E-19 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 RG43_RS04960 14e18d9d878b5c471ca448b933d46eef 378 Pfam PF06969 HemN C-terminal domain 304 364 2.9E-8 T 09-03-2017 IPR010723 HemN, C-terminal RG43_RS04960 14e18d9d878b5c471ca448b933d46eef 378 Gene3D G3DSA:3.80.30.20 7 239 4.3E-29 T 09-03-2017 IPR023404 Radical SAM, alpha/beta horseshoe RG43_RS04960 14e18d9d878b5c471ca448b933d46eef 378 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 368 2.7E-143 T 09-03-2017 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 RG43_RS04960 14e18d9d878b5c471ca448b933d46eef 378 SMART SM00729 6 223 1.3E-56 T 09-03-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RG43_RS04960 14e18d9d878b5c471ca448b933d46eef 378 SUPERFAMILY SSF102114 5 376 2.62E-108 T 09-03-2017 RG43_RS00175 af40ab32d836b5b2ff39e639d13304a0 82 Pfam PF04352 ProQ/FINO family 1 80 7.1E-13 T 09-03-2017 IPR016103 ProQ/FinO domain RG43_RS00175 af40ab32d836b5b2ff39e639d13304a0 82 Gene3D G3DSA:1.10.1710.10 1 81 3.1E-28 T 09-03-2017 IPR016103 ProQ/FinO domain RG43_RS00175 af40ab32d836b5b2ff39e639d13304a0 82 SUPERFAMILY SSF48657 1 75 8.63E-19 T 09-03-2017 IPR016103 ProQ/FinO domain RG43_RS24265 a44074113c9cd332a2aeec6006ff29e6 115 Pfam PF04965 Gene 25-like lysozyme 18 103 2.2E-14 T 09-03-2017 IPR007048 GpW/Gp25/anti-adapter protein IraD RG43_RS24265 a44074113c9cd332a2aeec6006ff29e6 115 Gene3D G3DSA:3.10.450.40 10 114 1.4E-36 T 09-03-2017 RG43_RS24265 a44074113c9cd332a2aeec6006ff29e6 115 SUPERFAMILY SSF160719 13 114 1.19E-29 T 09-03-2017 RG43_RS23805 b837a74346c7ec8a55808938a4589cfa 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 7.8E-18 T 09-03-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 RG43_RS23805 b837a74346c7ec8a55808938a4589cfa 394 Gene3D G3DSA:2.40.30.10 209 298 2.7E-37 T 09-03-2017 RG43_RS23805 b837a74346c7ec8a55808938a4589cfa 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 61.284 T 09-03-2017 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RG43_RS23805 b837a74346c7ec8a55808938a4589cfa 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.6E-14 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 RG43_RS23805 b837a74346c7ec8a55808938a4589cfa 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 200 7.1E-58 T 09-03-2017 RG43_RS23805 b837a74346c7ec8a55808938a4589cfa 394 SUPERFAMILY SSF50447 205 301 1.34E-30 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain RG43_RS23805 b837a74346c7ec8a55808938a4589cfa 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 2.5E-240 T 09-03-2017 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RG43_RS23805 b837a74346c7ec8a55808938a4589cfa 394 Gene3D G3DSA:3.40.50.300 3 208 5.0E-68 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS23805 b837a74346c7ec8a55808938a4589cfa 394 SUPERFAMILY SSF52540 6 219 1.94E-60 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS23805 b837a74346c7ec8a55808938a4589cfa 394 Gene3D G3DSA:2.40.30.10 300 393 8.4E-47 T 09-03-2017 RG43_RS23805 b837a74346c7ec8a55808938a4589cfa 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 09-03-2017 IPR031157 Tr-type G domain, conserved site RG43_RS23805 b837a74346c7ec8a55808938a4589cfa 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.5E-24 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RG43_RS23805 b837a74346c7ec8a55808938a4589cfa 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.5E-24 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RG43_RS23805 b837a74346c7ec8a55808938a4589cfa 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.5E-24 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RG43_RS23805 b837a74346c7ec8a55808938a4589cfa 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.5E-24 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RG43_RS23805 b837a74346c7ec8a55808938a4589cfa 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.5E-24 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RG43_RS23805 b837a74346c7ec8a55808938a4589cfa 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 9.5E-34 T 09-03-2017 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal RG43_RS23805 b837a74346c7ec8a55808938a4589cfa 394 SUPERFAMILY SSF50465 298 393 2.62E-36 T 09-03-2017 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RG43_RS14335 74428bf03d3c75c944ea0b2eb632701f 891 Gene3D G3DSA:1.20.1090.10 644 864 1.7E-68 T 09-03-2017 RG43_RS14335 74428bf03d3c75c944ea0b2eb632701f 891 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 720 740 - T 09-03-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 RG43_RS14335 74428bf03d3c75c944ea0b2eb632701f 891 SUPERFAMILY SSF53720 6 453 2.62E-85 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RG43_RS14335 74428bf03d3c75c944ea0b2eb632701f 891 Gene3D G3DSA:3.40.309.10 214 273 3.9E-30 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RG43_RS14335 74428bf03d3c75c944ea0b2eb632701f 891 Gene3D G3DSA:3.40.309.10 309 404 3.9E-30 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RG43_RS14335 74428bf03d3c75c944ea0b2eb632701f 891 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 632 660 - T 09-03-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 RG43_RS14335 74428bf03d3c75c944ea0b2eb632701f 891 Pfam PF00171 Aldehyde dehydrogenase family 5 400 8.4E-29 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RG43_RS14335 74428bf03d3c75c944ea0b2eb632701f 891 Gene3D G3DSA:3.40.50.1970 450 643 6.5E-63 T 09-03-2017 RG43_RS14335 74428bf03d3c75c944ea0b2eb632701f 891 SUPERFAMILY SSF56796 449 867 4.58E-119 T 09-03-2017 RG43_RS14335 74428bf03d3c75c944ea0b2eb632701f 891 Pfam PF00465 Iron-containing alcohol dehydrogenase 457 850 5.8E-114 T 09-03-2017 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 RG43_RS14335 74428bf03d3c75c944ea0b2eb632701f 891 Gene3D G3DSA:3.40.605.10 4 206 4.4E-25 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RG43_RS14335 74428bf03d3c75c944ea0b2eb632701f 891 PIRSF PIRSF000111 1 866 0.0 T 09-03-2017 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00592+1.1.1.1|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00650+1.2.1.10|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7085|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7180|MetaCyc: PWY-7396 RG43_RS04980 2b68a56e970a5df33f6770665e758a03 234 Gene3D G3DSA:3.20.20.10 1 233 3.5E-93 T 09-03-2017 IPR029066 PLP-binding barrel RG43_RS04980 2b68a56e970a5df33f6770665e758a03 234 Pfam PF01168 Alanine racemase, N-terminal domain 7 229 1.1E-29 T 09-03-2017 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RG43_RS04980 2b68a56e970a5df33f6770665e758a03 234 PIRSF PIRSF004848 1 234 1.3E-74 T 09-03-2017 IPR011078 Uncharacterised protein family UPF0001 RG43_RS04980 2b68a56e970a5df33f6770665e758a03 234 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 229 8.7E-105 T 09-03-2017 IPR011078 Uncharacterised protein family UPF0001 RG43_RS04980 2b68a56e970a5df33f6770665e758a03 234 SUPERFAMILY SSF51419 1 227 1.57E-79 T 09-03-2017 IPR029066 PLP-binding barrel RG43_RS04980 2b68a56e970a5df33f6770665e758a03 234 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 79 93 - T 09-03-2017 IPR011078 Uncharacterised protein family UPF0001 RG43_RS26825 080b644b7bb72f2ca2b0f874a26ce616 123 TIGRFAM TIGR01707 gspI: type II secretion system protein I 4 102 3.1E-26 T 09-03-2017 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 RG43_RS26825 080b644b7bb72f2ca2b0f874a26ce616 123 SUPERFAMILY SSF54523 37 114 2.2E-20 T 09-03-2017 RG43_RS26825 080b644b7bb72f2ca2b0f874a26ce616 123 Pfam PF02501 Type II secretion system (T2SS), protein I 38 115 4.3E-20 T 09-03-2017 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 RG43_RS26825 080b644b7bb72f2ca2b0f874a26ce616 123 Gene3D G3DSA:3.30.1300.30 32 116 2.2E-29 T 09-03-2017 RG43_RS26825 080b644b7bb72f2ca2b0f874a26ce616 123 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 2 25 1.5E-8 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS26825 080b644b7bb72f2ca2b0f874a26ce616 123 Pfam PF13633 Prokaryotic N-terminal methylation site 2 26 6.8E-9 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS26825 080b644b7bb72f2ca2b0f874a26ce616 123 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 3 23 - T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS04450 080b644b7bb72f2ca2b0f874a26ce616 123 TIGRFAM TIGR01707 gspI: type II secretion system protein I 4 102 3.1E-26 T 09-03-2017 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 RG43_RS04450 080b644b7bb72f2ca2b0f874a26ce616 123 SUPERFAMILY SSF54523 37 114 2.2E-20 T 09-03-2017 RG43_RS04450 080b644b7bb72f2ca2b0f874a26ce616 123 Pfam PF02501 Type II secretion system (T2SS), protein I 38 115 4.3E-20 T 09-03-2017 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 RG43_RS04450 080b644b7bb72f2ca2b0f874a26ce616 123 Gene3D G3DSA:3.30.1300.30 32 116 2.2E-29 T 09-03-2017 RG43_RS04450 080b644b7bb72f2ca2b0f874a26ce616 123 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 2 25 1.5E-8 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS04450 080b644b7bb72f2ca2b0f874a26ce616 123 Pfam PF13633 Prokaryotic N-terminal methylation site 2 26 6.8E-9 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS04450 080b644b7bb72f2ca2b0f874a26ce616 123 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 3 23 - T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS26550 d24c523a8ef4db91a35a85a55ac2da72 387 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 09-03-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 RG43_RS26550 d24c523a8ef4db91a35a85a55ac2da72 387 Gene3D G3DSA:1.20.1090.10 185 386 1.8E-56 T 09-03-2017 RG43_RS26550 d24c523a8ef4db91a35a85a55ac2da72 387 Gene3D G3DSA:3.40.50.1970 1 184 6.2E-56 T 09-03-2017 RG43_RS26550 d24c523a8ef4db91a35a85a55ac2da72 387 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 09-03-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 RG43_RS26550 d24c523a8ef4db91a35a85a55ac2da72 387 SUPERFAMILY SSF56796 1 385 7.07E-109 T 09-03-2017 RG43_RS26550 d24c523a8ef4db91a35a85a55ac2da72 387 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 360 1.1E-92 T 09-03-2017 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 RG43_RS04175 d24c523a8ef4db91a35a85a55ac2da72 387 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 09-03-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 RG43_RS04175 d24c523a8ef4db91a35a85a55ac2da72 387 Gene3D G3DSA:1.20.1090.10 185 386 1.8E-56 T 09-03-2017 RG43_RS04175 d24c523a8ef4db91a35a85a55ac2da72 387 Gene3D G3DSA:3.40.50.1970 1 184 6.2E-56 T 09-03-2017 RG43_RS04175 d24c523a8ef4db91a35a85a55ac2da72 387 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 09-03-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 RG43_RS04175 d24c523a8ef4db91a35a85a55ac2da72 387 SUPERFAMILY SSF56796 1 385 7.07E-109 T 09-03-2017 RG43_RS04175 d24c523a8ef4db91a35a85a55ac2da72 387 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 360 1.1E-92 T 09-03-2017 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 RG43_RS18600 311bb3f9e122bd6079a29dded3b9d68e 319 Pfam PF07859 alpha/beta hydrolase fold 87 295 2.5E-51 T 09-03-2017 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 RG43_RS18600 311bb3f9e122bd6079a29dded3b9d68e 319 Gene3D G3DSA:3.40.50.1820 13 316 9.7E-69 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS18600 311bb3f9e122bd6079a29dded3b9d68e 319 Hamap MF_01958 Acetyl esterase [aes]. 1 319 72.861 T 09-03-2017 IPR023508 Acetyl esterase GO:0005737|GO:0052689 RG43_RS18600 311bb3f9e122bd6079a29dded3b9d68e 319 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 87 103 - T 09-03-2017 IPR002168 Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 Reactome: R-HSA-163560 RG43_RS18600 311bb3f9e122bd6079a29dded3b9d68e 319 SUPERFAMILY SSF53474 29 316 2.42E-56 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS18600 311bb3f9e122bd6079a29dded3b9d68e 319 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 159 171 - T 09-03-2017 IPR033140 Lipase, GDXG, putative serine active site RG43_RS04890 7e5b9e1948a45519c347a0d889bde283 711 Gene3D G3DSA:3.40.50.220 1 100 1.7E-32 T 09-03-2017 IPR027464 Ornithine decarboxylase, N-terminal domain KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 RG43_RS04890 7e5b9e1948a45519c347a0d889bde283 711 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 342 356 - T 09-03-2017 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 RG43_RS04890 7e5b9e1948a45519c347a0d889bde283 711 SUPERFAMILY SSF53383 101 559 1.3E-124 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS04890 7e5b9e1948a45519c347a0d889bde283 711 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 568 697 6.4E-47 T 09-03-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 RG43_RS04890 7e5b9e1948a45519c347a0d889bde283 711 SUPERFAMILY SSF55904 563 711 2.35E-44 T 09-03-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 RG43_RS04890 7e5b9e1948a45519c347a0d889bde283 711 Gene3D G3DSA:3.90.1150.10 413 585 4.1E-75 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RG43_RS04890 7e5b9e1948a45519c347a0d889bde283 711 SUPERFAMILY SSF52172 1 100 5.47E-26 T 09-03-2017 IPR011006 CheY-like superfamily RG43_RS04890 7e5b9e1948a45519c347a0d889bde283 711 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 101 543 2.8E-203 T 09-03-2017 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 RG43_RS04890 7e5b9e1948a45519c347a0d889bde283 711 Gene3D G3DSA:3.90.100.10 586 711 2.6E-38 T 09-03-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 RG43_RS04890 7e5b9e1948a45519c347a0d889bde283 711 Gene3D G3DSA:3.40.640.10 101 411 2.7E-116 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS04890 7e5b9e1948a45519c347a0d889bde283 711 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 4 93 4.9E-14 T 09-03-2017 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 RG43_RS04890 7e5b9e1948a45519c347a0d889bde283 711 PIRSF PIRSF009393 1 711 1.2E-288 T 09-03-2017 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 RG43_RS07925 d60263258112df4e74dbe6be17ea2f2f 442 Gene3D G3DSA:3.40.50.1100 180 438 4.8E-45 T 09-03-2017 RG43_RS07925 d60263258112df4e74dbe6be17ea2f2f 442 SUPERFAMILY SSF53686 73 435 2.61E-55 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RG43_RS07925 d60263258112df4e74dbe6be17ea2f2f 442 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 108 122 - T 09-03-2017 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 RG43_RS07925 d60263258112df4e74dbe6be17ea2f2f 442 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 442 280.242 T 09-03-2017 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 RG43_RS07925 d60263258112df4e74dbe6be17ea2f2f 442 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 9 438 1.3E-245 T 09-03-2017 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 RG43_RS07925 d60263258112df4e74dbe6be17ea2f2f 442 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 74 402 1.7E-60 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RG43_RS06460 f443e90d36740b58fe0f16f4d18eb491 390 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 289 1.4E-13 T 09-03-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RG43_RS06460 f443e90d36740b58fe0f16f4d18eb491 390 Pfam PF00529 HlyD membrane-fusion protein of T1SS 35 345 2.4E-18 T 09-03-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RG43_RS06460 f443e90d36740b58fe0f16f4d18eb491 390 SUPERFAMILY SSF111369 195 268 7.85E-8 T 09-03-2017 RG43_RS06460 f443e90d36740b58fe0f16f4d18eb491 390 SUPERFAMILY SSF111369 57 107 9.68E-8 T 09-03-2017 RG43_RS06460 f443e90d36740b58fe0f16f4d18eb491 390 SUPERFAMILY SSF111369 136 178 9.68E-8 T 09-03-2017 RG43_RS06460 f443e90d36740b58fe0f16f4d18eb491 390 TIGRFAM TIGR00998 8a0101: efflux pump membrane protein 20 345 3.2E-149 T 09-03-2017 IPR005694 Efflux pump membrane protein Emr GO:0006855|GO:0015238 RG43_RS06460 f443e90d36740b58fe0f16f4d18eb491 390 Gene3D G3DSA:2.40.50.100 215 248 1.3E-17 T 09-03-2017 RG43_RS06460 f443e90d36740b58fe0f16f4d18eb491 390 Gene3D G3DSA:2.40.50.100 60 94 1.3E-17 T 09-03-2017 RG43_RS16480 2816865180c307fcd32ecceb2d0d0a27 623 Gene3D G3DSA:3.40.50.300 12 270 2.4E-71 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16480 2816865180c307fcd32ecceb2d0d0a27 623 Gene3D G3DSA:3.40.50.300 312 565 9.9E-81 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16480 2816865180c307fcd32ecceb2d0d0a27 623 SUPERFAMILY SSF52540 12 268 7.64E-64 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16480 2816865180c307fcd32ecceb2d0d0a27 623 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS16480 2816865180c307fcd32ecceb2d0d0a27 623 SMART SM00382 349 549 2.1E-13 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS16480 2816865180c307fcd32ecceb2d0d0a27 623 SMART SM00382 41 246 3.6E-18 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS16480 2816865180c307fcd32ecceb2d0d0a27 623 Pfam PF00005 ABC transporter 33 196 5.5E-28 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS16480 2816865180c307fcd32ecceb2d0d0a27 623 Pfam PF00005 ABC transporter 341 491 8.0E-30 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS16480 2816865180c307fcd32ecceb2d0d0a27 623 ProSitePatterns PS00211 ABC transporters family signature. 464 478 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS16480 2816865180c307fcd32ecceb2d0d0a27 623 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 248 280 9.2E-8 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RG43_RS16480 2816865180c307fcd32ecceb2d0d0a27 623 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 543 575 6.6E-8 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RG43_RS16480 2816865180c307fcd32ecceb2d0d0a27 623 SUPERFAMILY SSF52540 314 563 7.55E-72 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS17255 9aee08d86fda5dae6e87cf71886f6db9 313 Pfam PF01545 Cation efflux family 22 213 6.4E-52 T 09-03-2017 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RG43_RS17255 9aee08d86fda5dae6e87cf71886f6db9 313 Gene3D G3DSA:1.20.1510.10 18 213 2.3E-67 T 09-03-2017 IPR027469 Cation efflux protein transmembrane domain RG43_RS17255 9aee08d86fda5dae6e87cf71886f6db9 313 Hamap MF_00552 Zinc transporter ZitB [zitB]. 3 312 66.916 T 09-03-2017 IPR023500 Zinc transporter ZitB GO:0005385|GO:0006829|GO:0016020 RG43_RS17255 9aee08d86fda5dae6e87cf71886f6db9 313 SUPERFAMILY SSF161111 16 214 1.07E-60 T 09-03-2017 RG43_RS17255 9aee08d86fda5dae6e87cf71886f6db9 313 Gene3D G3DSA:3.30.70.1350 227 290 7.8E-4 T 09-03-2017 IPR027470 Cation efflux protein, cytoplasmic domain RG43_RS17255 9aee08d86fda5dae6e87cf71886f6db9 313 SUPERFAMILY SSF160240 227 292 1.05E-9 T 09-03-2017 RG43_RS17255 9aee08d86fda5dae6e87cf71886f6db9 313 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 18 293 3.3E-102 T 09-03-2017 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RG43_RS08605 86d97e2f5a69c72ab3ed2349a3802e98 1252 Gene3D G3DSA:2.40.128.130 940 1252 1.3E-70 T 09-03-2017 IPR005546 Autotransporter beta-domain RG43_RS08605 86d97e2f5a69c72ab3ed2349a3802e98 1252 TIGRFAM TIGR01376 POMP_repeat: chlamydial polymorphic outer membrane protein repeat 228 248 2.5E-5 T 09-03-2017 IPR003368 Polymorphic outer membrane protein repeat RG43_RS08605 86d97e2f5a69c72ab3ed2349a3802e98 1252 TIGRFAM TIGR01376 POMP_repeat: chlamydial polymorphic outer membrane protein repeat 124 146 4.8E-4 T 09-03-2017 IPR003368 Polymorphic outer membrane protein repeat RG43_RS08605 86d97e2f5a69c72ab3ed2349a3802e98 1252 SUPERFAMILY SSF103515 973 1252 6.67E-33 T 09-03-2017 IPR005546 Autotransporter beta-domain RG43_RS08605 86d97e2f5a69c72ab3ed2349a3802e98 1252 SUPERFAMILY SSF51126 414 922 1.41E-40 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor RG43_RS08605 86d97e2f5a69c72ab3ed2349a3802e98 1252 Pfam PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat 159 177 0.041 T 09-03-2017 IPR003368 Polymorphic outer membrane protein repeat RG43_RS08605 86d97e2f5a69c72ab3ed2349a3802e98 1252 Pfam PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat 228 245 0.063 T 09-03-2017 IPR003368 Polymorphic outer membrane protein repeat RG43_RS08605 86d97e2f5a69c72ab3ed2349a3802e98 1252 Pfam PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat 127 144 0.11 T 09-03-2017 IPR003368 Polymorphic outer membrane protein repeat RG43_RS08605 86d97e2f5a69c72ab3ed2349a3802e98 1252 Pfam PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat 186 208 0.0074 T 09-03-2017 IPR003368 Polymorphic outer membrane protein repeat RG43_RS08605 86d97e2f5a69c72ab3ed2349a3802e98 1252 Gene3D G3DSA:2.160.20.20 462 934 1.5E-36 T 09-03-2017 IPR012332 P22 tailspike C-terminal domain-like RG43_RS08605 86d97e2f5a69c72ab3ed2349a3802e98 1252 SMART SM00869 986 1241 1.8E-34 T 09-03-2017 IPR005546 Autotransporter beta-domain RG43_RS08605 86d97e2f5a69c72ab3ed2349a3802e98 1252 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 328 359 3.9E-7 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat RG43_RS08605 86d97e2f5a69c72ab3ed2349a3802e98 1252 Pfam PF03797 Autotransporter beta-domain 987 1231 2.5E-38 T 09-03-2017 IPR005546 Autotransporter beta-domain RG43_RS08605 86d97e2f5a69c72ab3ed2349a3802e98 1252 Pfam PF03212 Pertactin 814 916 7.1E-9 T 09-03-2017 IPR004899 Pertactin, central region RG43_RS08605 86d97e2f5a69c72ab3ed2349a3802e98 1252 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 809 1252 6.1E-113 T 09-03-2017 IPR006315 Outer membrane autotransporter barrel GO:0019867 RG43_RS08760 ca994a507e551f1af2be17e8723917e9 231 Pfam PF12800 4Fe-4S binding domain 136 155 0.033 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS08760 ca994a507e551f1af2be17e8723917e9 231 Pfam PF12800 4Fe-4S binding domain 183 196 0.2 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS08760 ca994a507e551f1af2be17e8723917e9 231 Gene3D G3DSA:1.10.1060.10 42 69 1.5E-9 T 09-03-2017 RG43_RS08760 ca994a507e551f1af2be17e8723917e9 231 Gene3D G3DSA:1.10.1060.10 155 196 1.5E-9 T 09-03-2017 RG43_RS08760 ca994a507e551f1af2be17e8723917e9 231 Gene3D G3DSA:3.30.70.20 70 105 3.4E-10 T 09-03-2017 RG43_RS08760 ca994a507e551f1af2be17e8723917e9 231 SUPERFAMILY SSF54862 59 204 9.0E-26 T 09-03-2017 RG43_RS08760 ca994a507e551f1af2be17e8723917e9 231 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 61 72 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS08760 ca994a507e551f1af2be17e8723917e9 231 Gene3D G3DSA:3.30.70.20 106 154 3.5E-8 T 09-03-2017 RG43_RS08760 ca994a507e551f1af2be17e8723917e9 231 Pfam PF12838 4Fe-4S dicluster domain 60 115 2.1E-7 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS08760 ca994a507e551f1af2be17e8723917e9 231 TIGRFAM TIGR00397 mauM_napG: MauM/NapG family ferredoxin-type protein 10 216 3.5E-71 T 09-03-2017 IPR004494 MauM/NapG ferredoxin-type protein RG43_RS19010 bfd223c002592e9f569adb811cd8945c 1047 Gene3D G3DSA:3.40.50.300 217 275 1.1E-4 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS19010 bfd223c002592e9f569adb811cd8945c 1047 Gene3D G3DSA:3.40.50.300 1 175 2.9E-37 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS19010 bfd223c002592e9f569adb811cd8945c 1047 Gene3D G3DSA:3.40.50.300 910 1034 2.9E-37 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS19010 bfd223c002592e9f569adb811cd8945c 1047 Gene3D G3DSA:3.40.50.300 825 841 2.9E-37 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS19010 bfd223c002592e9f569adb811cd8945c 1047 Pfam PF13558 Putative exonuclease SbcCD, C subunit 930 1001 2.5E-15 T 09-03-2017 RG43_RS19010 bfd223c002592e9f569adb811cd8945c 1047 SUPERFAMILY SSF52540 821 1019 1.72E-16 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS19010 bfd223c002592e9f569adb811cd8945c 1047 TIGRFAM TIGR00618 sbcc: exonuclease SbcC 1 1039 0.0 T 09-03-2017 IPR004592 Nuclease SbcC, gammaproteobacteria type RG43_RS19010 bfd223c002592e9f569adb811cd8945c 1047 SUPERFAMILY SSF52540 248 404 4.43E-9 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS19010 bfd223c002592e9f569adb811cd8945c 1047 SUPERFAMILY SSF52540 1 58 4.43E-9 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS19010 bfd223c002592e9f569adb811cd8945c 1047 Pfam PF13555 P-loop containing region of AAA domain 26 63 9.3E-7 T 09-03-2017 RG43_RS19010 bfd223c002592e9f569adb811cd8945c 1047 SUPERFAMILY SSF52540 1 270 1.47E-35 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS09675 3d75e5e445a45611cdab9d16b42291fb 371 Pfam PF13477 Glycosyl transferase 4-like 3 127 2.0E-5 T 09-03-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 RG43_RS09675 3d75e5e445a45611cdab9d16b42291fb 371 Gene3D G3DSA:3.40.50.2000 147 302 1.9E-4 T 09-03-2017 RG43_RS09675 3d75e5e445a45611cdab9d16b42291fb 371 SUPERFAMILY SSF53756 24 366 2.76E-31 T 09-03-2017 RG43_RS09675 3d75e5e445a45611cdab9d16b42291fb 371 Pfam PF13692 Glycosyl transferases group 1 186 316 3.9E-7 T 09-03-2017 RG43_RS01970 50de4a9acc2a2c50cf28b01e4ddd6a12 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 136 152 1.4E-5 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RG43_RS01970 50de4a9acc2a2c50cf28b01e4ddd6a12 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 174 1.4E-5 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RG43_RS01970 50de4a9acc2a2c50cf28b01e4ddd6a12 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 1.4E-5 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RG43_RS01970 50de4a9acc2a2c50cf28b01e4ddd6a12 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 105 118 1.4E-5 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RG43_RS01970 50de4a9acc2a2c50cf28b01e4ddd6a12 222 SUPERFAMILY SSF56784 6 217 1.79E-47 T 09-03-2017 IPR023214 HAD-like domain RG43_RS01970 50de4a9acc2a2c50cf28b01e4ddd6a12 222 Gene3D G3DSA:3.40.50.1000 10 195 1.1E-28 T 09-03-2017 IPR023214 HAD-like domain RG43_RS01970 50de4a9acc2a2c50cf28b01e4ddd6a12 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 13 191 1.3E-19 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RG43_RS01970 50de4a9acc2a2c50cf28b01e4ddd6a12 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 190 1.3E-10 T 09-03-2017 IPR023214 HAD-like domain RG43_RS13525 8d403bf96a5b522f1dbc4920042dce1d 479 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 278 289 - T 09-03-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RG43_RS13525 8d403bf96a5b522f1dbc4920042dce1d 479 Gene3D G3DSA:3.40.605.10 5 264 2.9E-92 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RG43_RS13525 8d403bf96a5b522f1dbc4920042dce1d 479 Pfam PF00171 Aldehyde dehydrogenase family 22 475 5.8E-166 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RG43_RS13525 8d403bf96a5b522f1dbc4920042dce1d 479 SUPERFAMILY SSF53720 4 477 2.49E-159 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RG43_RS13525 8d403bf96a5b522f1dbc4920042dce1d 479 Gene3D G3DSA:3.40.309.10 265 439 1.8E-66 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RG43_RS13525 8d403bf96a5b522f1dbc4920042dce1d 479 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 250 257 - T 09-03-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RG43_RS06025 2a130adef0671f4d8654696921b31b63 570 SUPERFAMILY SSF56014 150 344 1.96E-61 T 09-03-2017 RG43_RS06025 2a130adef0671f4d8654696921b31b63 570 SUPERFAMILY SSF56014 428 559 2.49E-34 T 09-03-2017 RG43_RS06025 2a130adef0671f4d8654696921b31b63 570 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 355 417 3.9E-14 T 09-03-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RG43_RS06025 2a130adef0671f4d8654696921b31b63 570 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 81 138 1.5E-12 T 09-03-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RG43_RS06025 2a130adef0671f4d8654696921b31b63 570 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 19 558 4.1E-303 T 09-03-2017 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RG43_RS06025 2a130adef0671f4d8654696921b31b63 570 SUPERFAMILY SSF55124 346 422 3.11E-21 T 09-03-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RG43_RS06025 2a130adef0671f4d8654696921b31b63 570 SUPERFAMILY SSF55124 13 142 1.21E-25 T 09-03-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RG43_RS06025 2a130adef0671f4d8654696921b31b63 570 Gene3D G3DSA:3.30.413.10 430 557 1.7E-34 T 09-03-2017 RG43_RS06025 2a130adef0671f4d8654696921b31b63 570 Gene3D G3DSA:3.30.413.10 150 340 2.3E-73 T 09-03-2017 RG43_RS06025 2a130adef0671f4d8654696921b31b63 570 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 10 570 58.725 T 09-03-2017 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RG43_RS06025 2a130adef0671f4d8654696921b31b63 570 Gene3D G3DSA:3.90.480.10 342 422 2.4E-62 T 09-03-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RG43_RS06025 2a130adef0671f4d8654696921b31b63 570 Gene3D G3DSA:3.90.480.10 74 146 2.4E-62 T 09-03-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RG43_RS06025 2a130adef0671f4d8654696921b31b63 570 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 477 493 - T 09-03-2017 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RG43_RS06025 2a130adef0671f4d8654696921b31b63 570 PRINTS PR00397 Sirohaem Fe-binding site signature 429 447 1.5E-8 T 09-03-2017 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RG43_RS06025 2a130adef0671f4d8654696921b31b63 570 PRINTS PR00397 Sirohaem Fe-binding site signature 477 495 1.5E-8 T 09-03-2017 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RG43_RS06025 2a130adef0671f4d8654696921b31b63 570 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 173 331 1.0E-47 T 09-03-2017 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RG43_RS06025 2a130adef0671f4d8654696921b31b63 570 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 430 545 0.37 T 09-03-2017 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RG43_RS21285 3279d575a3d10c30c51847f89440205b 428 SUPERFAMILY SSF54534 173 275 3.86E-28 T 09-03-2017 RG43_RS21285 3279d575a3d10c30c51847f89440205b 428 SUPERFAMILY SSF109998 25 201 5.2E-43 T 09-03-2017 IPR027304 Trigger factor/SurA domain RG43_RS21285 3279d575a3d10c30c51847f89440205b 428 Gene3D G3DSA:3.10.50.40 282 406 5.0E-37 T 09-03-2017 RG43_RS21285 3279d575a3d10c30c51847f89440205b 428 Gene3D G3DSA:3.10.50.40 166 277 1.1E-32 T 09-03-2017 RG43_RS21285 3279d575a3d10c30c51847f89440205b 428 Pfam PF09312 SurA N-terminal domain 25 142 1.8E-45 T 09-03-2017 IPR015391 SurA N-terminal RG43_RS21285 3279d575a3d10c30c51847f89440205b 428 SUPERFAMILY SSF54534 283 385 1.37E-32 T 09-03-2017 RG43_RS21285 3279d575a3d10c30c51847f89440205b 428 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 321 342 - T 09-03-2017 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-936440 RG43_RS21285 3279d575a3d10c30c51847f89440205b 428 Gene3D G3DSA:1.10.3120.10 37 115 4.1E-4 T 09-03-2017 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 RG43_RS21285 3279d575a3d10c30c51847f89440205b 428 Pfam PF00639 PPIC-type PPIASE domain 178 272 1.9E-20 T 09-03-2017 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 RG43_RS21285 3279d575a3d10c30c51847f89440205b 428 Hamap MF_01183 Chaperone SurA [surA]. 9 428 34.445 T 09-03-2017 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 RG43_RS21285 3279d575a3d10c30c51847f89440205b 428 Pfam PF13616 PPIC-type PPIASE domain 282 383 2.4E-26 T 09-03-2017 RG43_RS21285 3279d575a3d10c30c51847f89440205b 428 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 212 232 - T 09-03-2017 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-936440 RG43_RS09165 94fb468d39209871250b7b984ab087e7 385 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 195 379 6.3E-22 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS09165 94fb468d39209871250b7b984ab087e7 385 Gene3D G3DSA:1.10.3720.10 166 367 8.7E-20 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS09165 94fb468d39209871250b7b984ab087e7 385 SUPERFAMILY SSF161098 173 372 1.53E-31 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS21785 61c27c1430528e71237fa44e3aa2e192 157 Pfam PF12821 Threonine/Serine exporter, ThrE 13 147 3.5E-33 T 09-03-2017 IPR024528 Threonine/Serine exporter, ThrE RG43_RS21785 61c27c1430528e71237fa44e3aa2e192 157 Hamap MF_01191 UPF0442 protein YjjB [yjjB]. 1 157 46.186 T 09-03-2017 IPR020914 Uncharacterised protein family UPF0442 RG43_RS17160 8c8c53eaacbbf8df3d27368fbb9981b3 350 SUPERFAMILY SSF54506 2 167 2.62E-63 T 09-03-2017 RG43_RS17160 8c8c53eaacbbf8df3d27368fbb9981b3 350 Pfam PF04303 PrpF protein 1 350 9.2E-161 T 09-03-2017 IPR007400 PrpF protein RG43_RS17160 8c8c53eaacbbf8df3d27368fbb9981b3 350 Gene3D G3DSA:3.10.310.10 2 175 2.9E-77 T 09-03-2017 RG43_RS17160 8c8c53eaacbbf8df3d27368fbb9981b3 350 SUPERFAMILY SSF54506 170 350 2.41E-57 T 09-03-2017 RG43_RS17160 8c8c53eaacbbf8df3d27368fbb9981b3 350 Gene3D G3DSA:3.10.310.10 176 328 7.8E-55 T 09-03-2017 RG43_RS09710 5ebc1478e5c2952965f2f896ce45eb42 468 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 09-03-2017 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 RG43_RS09710 5ebc1478e5c2952965f2f896ce45eb42 468 SUPERFAMILY SSF48179 177 467 2.52E-131 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RG43_RS09710 5ebc1478e5c2952965f2f896ce45eb42 468 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 466 6.8E-132 T 09-03-2017 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 RG43_RS09710 5ebc1478e5c2952965f2f896ce45eb42 468 Gene3D G3DSA:1.20.5.320 436 467 1.4E-22 T 09-03-2017 IPR012284 6-phosphogluconate dehydrogenase, domain 3 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 RG43_RS09710 5ebc1478e5c2952965f2f896ce45eb42 468 Gene3D G3DSA:1.10.1040.10 181 433 4.6E-119 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RG43_RS09710 5ebc1478e5c2952965f2f896ce45eb42 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 1.7E-89 T 09-03-2017 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 RG43_RS09710 5ebc1478e5c2952965f2f896ce45eb42 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 1.7E-89 T 09-03-2017 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 RG43_RS09710 5ebc1478e5c2952965f2f896ce45eb42 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 1.7E-89 T 09-03-2017 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 RG43_RS09710 5ebc1478e5c2952965f2f896ce45eb42 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 1.7E-89 T 09-03-2017 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 RG43_RS09710 5ebc1478e5c2952965f2f896ce45eb42 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 1.7E-89 T 09-03-2017 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 RG43_RS09710 5ebc1478e5c2952965f2f896ce45eb42 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 1.7E-89 T 09-03-2017 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 RG43_RS09710 5ebc1478e5c2952965f2f896ce45eb42 468 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 174 1.4E-50 T 09-03-2017 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 RG43_RS09710 5ebc1478e5c2952965f2f896ce45eb42 468 SUPERFAMILY SSF51735 4 173 1.78E-50 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS09710 5ebc1478e5c2952965f2f896ce45eb42 468 SMART SM01350 179 467 5.5E-223 T 09-03-2017 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 RG43_RS09710 5ebc1478e5c2952965f2f896ce45eb42 468 PIRSF PIRSF000109 1 468 7.2E-242 T 09-03-2017 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 RG43_RS09710 5ebc1478e5c2952965f2f896ce45eb42 468 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 467 8.3E-232 T 09-03-2017 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 RG43_RS09710 5ebc1478e5c2952965f2f896ce45eb42 468 Gene3D G3DSA:3.40.50.720 1 180 6.4E-61 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS16790 4efb495197c638234c35892befd7eca0 158 SUPERFAMILY SSF49777 1 157 2.88E-52 T 09-03-2017 IPR008914 Phosphatidylethanolamine-binding protein RG43_RS16790 4efb495197c638234c35892befd7eca0 158 Pfam PF01161 Phosphatidylethanolamine-binding protein 14 157 1.7E-38 T 09-03-2017 IPR008914 Phosphatidylethanolamine-binding protein RG43_RS16790 4efb495197c638234c35892befd7eca0 158 Gene3D G3DSA:3.90.280.10 1 158 5.3E-58 T 09-03-2017 IPR008914 Phosphatidylethanolamine-binding protein RG43_RS16790 4efb495197c638234c35892befd7eca0 158 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 18 157 3.1E-58 T 09-03-2017 IPR005247 YbhB/YbcL RG43_RS18155 57350d4032639f6f633bc254416bac64 1293 Gene3D G3DSA:2.30.38.10 776 853 3.4E-26 T 09-03-2017 RG43_RS18155 57350d4032639f6f633bc254416bac64 1293 Pfam PF00975 Thioesterase domain 1067 1281 1.0E-48 T 09-03-2017 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 RG43_RS18155 57350d4032639f6f633bc254416bac64 1293 Pfam PF00550 Phosphopantetheine attachment site 980 1040 1.1E-11 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain RG43_RS18155 57350d4032639f6f633bc254416bac64 1293 SUPERFAMILY SSF47336 971 1042 1.44E-12 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain RG43_RS18155 57350d4032639f6f633bc254416bac64 1293 ProSitePatterns PS00455 Putative AMP-binding domain signature. 600 611 - T 09-03-2017 IPR020845 AMP-binding, conserved site RG43_RS18155 57350d4032639f6f633bc254416bac64 1293 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1001 1016 - T 09-03-2017 IPR006162 Phosphopantetheine attachment site RG43_RS18155 57350d4032639f6f633bc254416bac64 1293 Pfam PF00501 AMP-binding enzyme 462 863 2.7E-95 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RG43_RS18155 57350d4032639f6f633bc254416bac64 1293 Pfam PF00668 Condensation domain 2 300 4.8E-73 T 09-03-2017 IPR001242 Condensation domain RG43_RS18155 57350d4032639f6f633bc254416bac64 1293 Gene3D G3DSA:3.40.50.980 454 621 9.5E-43 T 09-03-2017 RG43_RS18155 57350d4032639f6f633bc254416bac64 1293 SUPERFAMILY SSF56801 436 989 9.16E-147 T 09-03-2017 RG43_RS18155 57350d4032639f6f633bc254416bac64 1293 Gene3D G3DSA:1.10.1200.10 966 1046 1.2E-18 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain RG43_RS18155 57350d4032639f6f633bc254416bac64 1293 SUPERFAMILY SSF52777 9 183 1.45E-31 T 09-03-2017 RG43_RS18155 57350d4032639f6f633bc254416bac64 1293 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 482 886 1.7E-127 T 09-03-2017 IPR010071 Amino acid adenylation domain RG43_RS18155 57350d4032639f6f633bc254416bac64 1293 SUPERFAMILY SSF52777 190 426 3.0E-31 T 09-03-2017 RG43_RS18155 57350d4032639f6f633bc254416bac64 1293 Gene3D G3DSA:3.30.300.30 857 964 2.8E-28 T 09-03-2017 RG43_RS18155 57350d4032639f6f633bc254416bac64 1293 SUPERFAMILY SSF53474 1050 1291 5.88E-47 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS18155 57350d4032639f6f633bc254416bac64 1293 Gene3D G3DSA:3.40.50.980 622 775 5.4E-44 T 09-03-2017 RG43_RS18155 57350d4032639f6f633bc254416bac64 1293 Gene3D G3DSA:3.40.50.1820 1051 1170 6.6E-41 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS18155 57350d4032639f6f633bc254416bac64 1293 Gene3D G3DSA:3.40.50.1820 1225 1292 6.6E-41 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS18155 57350d4032639f6f633bc254416bac64 1293 SMART SM00823 Phosphopantetheine attachment site 977 1046 0.0041 T 09-03-2017 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 RG43_RS18155 57350d4032639f6f633bc254416bac64 1293 SMART SM00824 Thioesterase 1069 1245 1.0E-4 T 09-03-2017 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 RG43_RS17700 fb5cad1bdf5c957282b288c2e61ba77c 148 SUPERFAMILY SSF46785 6 134 1.76E-45 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS17700 fb5cad1bdf5c957282b288c2e61ba77c 148 Gene3D G3DSA:1.10.10.10 3 82 5.5E-31 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS17700 fb5cad1bdf5c957282b288c2e61ba77c 148 Pfam PF01475 Ferric uptake regulator family 10 130 6.9E-49 T 09-03-2017 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 RG43_RS26445 803e62c36dfb5433bdca77834ed93006 713 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 696 713 - T 09-03-2017 IPR010917 TonB-dependent receptor, conserved site RG43_RS26445 803e62c36dfb5433bdca77834ed93006 713 Gene3D G3DSA:2.170.130.10 49 176 1.9E-28 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RG43_RS26445 803e62c36dfb5433bdca77834ed93006 713 Gene3D G3DSA:2.40.170.20 183 713 4.9E-145 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RG43_RS26445 803e62c36dfb5433bdca77834ed93006 713 Pfam PF00593 TonB dependent receptor 475 711 6.5E-35 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RG43_RS26445 803e62c36dfb5433bdca77834ed93006 713 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 73 713 1.4E-112 T 09-03-2017 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 RG43_RS26445 803e62c36dfb5433bdca77834ed93006 713 Pfam PF07715 TonB-dependent Receptor Plug Domain 72 168 7.0E-14 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RG43_RS26445 803e62c36dfb5433bdca77834ed93006 713 SUPERFAMILY SSF56935 36 713 2.29E-127 T 09-03-2017 RG43_RS04070 803e62c36dfb5433bdca77834ed93006 713 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 696 713 - T 09-03-2017 IPR010917 TonB-dependent receptor, conserved site RG43_RS04070 803e62c36dfb5433bdca77834ed93006 713 Gene3D G3DSA:2.170.130.10 49 176 1.9E-28 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RG43_RS04070 803e62c36dfb5433bdca77834ed93006 713 Gene3D G3DSA:2.40.170.20 183 713 4.9E-145 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RG43_RS04070 803e62c36dfb5433bdca77834ed93006 713 Pfam PF00593 TonB dependent receptor 475 711 6.5E-35 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RG43_RS04070 803e62c36dfb5433bdca77834ed93006 713 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 73 713 1.4E-112 T 09-03-2017 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 RG43_RS04070 803e62c36dfb5433bdca77834ed93006 713 Pfam PF07715 TonB-dependent Receptor Plug Domain 72 168 7.0E-14 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RG43_RS04070 803e62c36dfb5433bdca77834ed93006 713 SUPERFAMILY SSF56935 36 713 2.29E-127 T 09-03-2017 RG43_RS12605 5eb8037764a3dc690216ba2878a3a447 391 Gene3D G3DSA:2.60.120.10 288 376 1.1E-11 T 09-03-2017 IPR014710 RmlC-like jelly roll fold RG43_RS12605 5eb8037764a3dc690216ba2878a3a447 391 Gene3D G3DSA:2.60.120.10 238 273 4.2E-66 T 09-03-2017 IPR014710 RmlC-like jelly roll fold RG43_RS12605 5eb8037764a3dc690216ba2878a3a447 391 Gene3D G3DSA:2.60.120.10 6 140 4.2E-66 T 09-03-2017 IPR014710 RmlC-like jelly roll fold RG43_RS12605 5eb8037764a3dc690216ba2878a3a447 391 SUPERFAMILY SSF51182 1 375 7.48E-102 T 09-03-2017 IPR011051 RmlC-like cupin domain RG43_RS12605 5eb8037764a3dc690216ba2878a3a447 391 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 3 384 3.5E-145 T 09-03-2017 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 RG43_RS12605 5eb8037764a3dc690216ba2878a3a447 391 Gene3D G3DSA:1.10.441.10 274 287 2.1E-24 T 09-03-2017 RG43_RS12605 5eb8037764a3dc690216ba2878a3a447 391 Gene3D G3DSA:1.10.441.10 141 231 2.1E-24 T 09-03-2017 RG43_RS12605 5eb8037764a3dc690216ba2878a3a447 391 PRINTS PR00714 Phosphomannose isomerase type I signature 4 22 2.0E-74 T 09-03-2017 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 RG43_RS12605 5eb8037764a3dc690216ba2878a3a447 391 PRINTS PR00714 Phosphomannose isomerase type I signature 255 274 2.0E-74 T 09-03-2017 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 RG43_RS12605 5eb8037764a3dc690216ba2878a3a447 391 PRINTS PR00714 Phosphomannose isomerase type I signature 274 293 2.0E-74 T 09-03-2017 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 RG43_RS12605 5eb8037764a3dc690216ba2878a3a447 391 PRINTS PR00714 Phosphomannose isomerase type I signature 81 102 2.0E-74 T 09-03-2017 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 RG43_RS12605 5eb8037764a3dc690216ba2878a3a447 391 PRINTS PR00714 Phosphomannose isomerase type I signature 32 47 2.0E-74 T 09-03-2017 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 RG43_RS12605 5eb8037764a3dc690216ba2878a3a447 391 PRINTS PR00714 Phosphomannose isomerase type I signature 126 149 2.0E-74 T 09-03-2017 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 RG43_RS12605 5eb8037764a3dc690216ba2878a3a447 391 PRINTS PR00714 Phosphomannose isomerase type I signature 236 255 2.0E-74 T 09-03-2017 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 RG43_RS12605 5eb8037764a3dc690216ba2878a3a447 391 PRINTS PR00714 Phosphomannose isomerase type I signature 220 235 2.0E-74 T 09-03-2017 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 RG43_RS12605 5eb8037764a3dc690216ba2878a3a447 391 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 255 280 - T 09-03-2017 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 RG43_RS12605 5eb8037764a3dc690216ba2878a3a447 391 Pfam PF01238 Phosphomannose isomerase type I 1 356 3.3E-123 T 09-03-2017 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 RG43_RS12605 5eb8037764a3dc690216ba2878a3a447 391 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 126 134 - T 09-03-2017 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 RG43_RS12605 5eb8037764a3dc690216ba2878a3a447 391 PIRSF PIRSF001480 1 391 3.4E-114 T 09-03-2017 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 RG43_RS19785 31784c82d70a7f4962f952a348eb6cec 247 SMART SM00232 1 119 0.0034 T 09-03-2017 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 RG43_RS19785 31784c82d70a7f4962f952a348eb6cec 247 Gene3D G3DSA:3.90.1720.10 115 227 8.6E-17 T 09-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain RG43_RS19785 31784c82d70a7f4962f952a348eb6cec 247 Gene3D G3DSA:3.40.140.10 5 114 1.2E-17 T 09-03-2017 RG43_RS19785 31784c82d70a7f4962f952a348eb6cec 247 Pfam PF14464 Prokaryotic homologs of the JAB domain 3 98 3.5E-13 T 09-03-2017 IPR028090 JAB domain, prokaryotic RG43_RS19785 31784c82d70a7f4962f952a348eb6cec 247 Pfam PF00877 NlpC/P60 family 111 223 6.5E-13 T 09-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain RG43_RS19785 31784c82d70a7f4962f952a348eb6cec 247 SUPERFAMILY SSF54001 100 228 9.61E-17 T 09-03-2017 RG43_RS19785 31784c82d70a7f4962f952a348eb6cec 247 SUPERFAMILY SSF102712 6 97 3.53E-16 T 09-03-2017 RG43_RS18670 a966992752fe76fa70fa944e45b5ed7e 215 Gene3D G3DSA:1.10.10.60 1 44 7.8E-22 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS18670 a966992752fe76fa70fa944e45b5ed7e 215 SUPERFAMILY SSF46689 1 68 3.64E-20 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS18670 a966992752fe76fa70fa944e45b5ed7e 215 SUPERFAMILY SSF48498 84 200 6.43E-14 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RG43_RS18670 a966992752fe76fa70fa944e45b5ed7e 215 Gene3D G3DSA:1.10.357.10 63 204 1.8E-18 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RG43_RS18670 a966992752fe76fa70fa944e45b5ed7e 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 1.1E-12 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RG43_RS18670 a966992752fe76fa70fa944e45b5ed7e 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.1E-12 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RG43_RS18670 a966992752fe76fa70fa944e45b5ed7e 215 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 84 202 8.6E-52 T 09-03-2017 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 RG43_RS18670 a966992752fe76fa70fa944e45b5ed7e 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 1.2E-19 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RG43_RS18670 a966992752fe76fa70fa944e45b5ed7e 215 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 09-03-2017 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RG43_RS18670 a966992752fe76fa70fa944e45b5ed7e 215 Gene3D G3DSA:1.10.10.60 45 62 7.9E-11 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS05170 474f769a207f1112debc38d442b2c764 331 SUPERFAMILY SSF52540 5 321 2.63E-89 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS05170 474f769a207f1112debc38d442b2c764 331 Gene3D G3DSA:1.20.5.170 4 54 3.2E-18 T 09-03-2017 RG43_RS05170 474f769a207f1112debc38d442b2c764 331 Pfam PF03308 ArgK protein 22 294 1.1E-118 T 09-03-2017 RG43_RS05170 474f769a207f1112debc38d442b2c764 331 Gene3D G3DSA:1.10.287.130 263 331 2.2E-38 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS05170 474f769a207f1112debc38d442b2c764 331 TIGRFAM TIGR00750 lao: LAO/AO transport system ATPase 17 323 4.0E-137 T 09-03-2017 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB GO:0003924|GO:0005525 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 RG43_RS05170 474f769a207f1112debc38d442b2c764 331 Gene3D G3DSA:3.40.50.300 55 258 2.1E-47 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS19690 df7b1f1ac16d54d8bafdf26ea9c7e9cc 537 Pfam PF03050 Transposase IS66 family 197 486 2.2E-94 T 09-03-2017 IPR004291 Transposase, IS66 RG43_RS19690 df7b1f1ac16d54d8bafdf26ea9c7e9cc 537 Pfam PF13817 IS66 C-terminal element 494 530 1.1E-15 T 09-03-2017 RG43_RS19690 df7b1f1ac16d54d8bafdf26ea9c7e9cc 537 Pfam PF13005 zinc-finger binding domain of transposase IS66 138 182 2.8E-11 T 09-03-2017 IPR024474 Zinc-finger binding domain of transposase IS66 RG43_RS19690 df7b1f1ac16d54d8bafdf26ea9c7e9cc 537 Pfam PF13007 Transposase C of IS166 homeodomain 60 130 4.0E-11 T 09-03-2017 IPR024463 Transposase TnpC, homeodomain RG43_RS24905 041f55897a296bafa177a6060c808d38 222 SUPERFAMILY SSF52499 4 220 6.67E-61 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RG43_RS24905 041f55897a296bafa177a6060c808d38 222 Gene3D G3DSA:3.40.50.850 5 221 5.1E-73 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RG43_RS24905 041f55897a296bafa177a6060c808d38 222 Pfam PF00857 Isochorismatase family 20 213 1.9E-49 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RG43_RS09030 0a8cc74b00a5e43afeb4b34a60edb8f3 278 SUPERFAMILY SSF53474 1 276 5.13E-91 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS09030 0a8cc74b00a5e43afeb4b34a60edb8f3 278 Pfam PF00756 Putative esterase 21 271 1.6E-72 T 09-03-2017 IPR000801 Putative esterase Reactome: R-HSA-156590 RG43_RS09030 0a8cc74b00a5e43afeb4b34a60edb8f3 278 Gene3D G3DSA:3.40.50.1820 1 276 3.3E-79 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS09030 0a8cc74b00a5e43afeb4b34a60edb8f3 278 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 2 275 2.0E-118 T 09-03-2017 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 RG43_RS11265 f034c6fa46c408eb985fa737a4492ad8 440 SUPERFAMILY SSF54106 96 139 9.42E-5 T 09-03-2017 IPR018392 LysM domain RG43_RS11265 f034c6fa46c408eb985fa737a4492ad8 440 Pfam PF01551 Peptidase family M23 313 407 4.5E-33 T 09-03-2017 IPR016047 Peptidase M23 RG43_RS11265 f034c6fa46c408eb985fa737a4492ad8 440 Pfam PF01476 LysM domain 98 141 2.3E-7 T 09-03-2017 IPR018392 LysM domain RG43_RS11265 f034c6fa46c408eb985fa737a4492ad8 440 SUPERFAMILY SSF51261 169 408 1.88E-69 T 09-03-2017 IPR011055 Duplicated hybrid motif RG43_RS11265 f034c6fa46c408eb985fa737a4492ad8 440 Gene3D G3DSA:2.70.70.10 266 409 2.6E-50 T 09-03-2017 RG43_RS11265 f034c6fa46c408eb985fa737a4492ad8 440 Gene3D G3DSA:3.10.350.10 97 139 8.5E-7 T 09-03-2017 IPR018392 LysM domain RG43_RS11265 f034c6fa46c408eb985fa737a4492ad8 440 SMART SM00257 97 142 4.4E-6 T 09-03-2017 IPR018392 LysM domain RG43_RS11265 f034c6fa46c408eb985fa737a4492ad8 440 Pfam PF08525 Opacity-associated protein A N-terminal motif 12 39 5.4E-9 T 09-03-2017 IPR013731 Opacity-associated protein A, N-terminal RG43_RS13605 f83eee263abe5cd4bd764f40326cf591 70 SMART SM00342 2 66 3.4E-10 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS13605 f83eee263abe5cd4bd764f40326cf591 70 SUPERFAMILY SSF46689 18 69 2.28E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS13605 f83eee263abe5cd4bd764f40326cf591 70 Pfam PF12833 Helix-turn-helix domain 6 67 2.5E-16 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS13605 f83eee263abe5cd4bd764f40326cf591 70 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 35 50 1.4E-7 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RG43_RS13605 f83eee263abe5cd4bd764f40326cf591 70 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 50 66 1.4E-7 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RG43_RS13605 f83eee263abe5cd4bd764f40326cf591 70 Gene3D G3DSA:1.10.10.60 16 69 1.2E-18 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS19390 c94c7976e54318571dde290996842d19 328 SUPERFAMILY SSF53822 29 326 3.77E-66 T 09-03-2017 IPR028082 Periplasmic binding protein-like I RG43_RS19390 c94c7976e54318571dde290996842d19 328 Gene3D G3DSA:3.40.50.2300 149 281 2.9E-25 T 09-03-2017 RG43_RS19390 c94c7976e54318571dde290996842d19 328 Pfam PF13407 Periplasmic binding protein domain 37 289 3.1E-51 T 09-03-2017 IPR025997 Periplasmic binding protein RG43_RS19390 c94c7976e54318571dde290996842d19 328 Gene3D G3DSA:3.40.50.2300 32 148 9.4E-28 T 09-03-2017 RG43_RS22365 8f4fe1b693cc25614d1e63196dfe9bc0 212 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 44 199 2.3E-72 T 09-03-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 RG43_RS22365 8f4fe1b693cc25614d1e63196dfe9bc0 212 Pfam PF01625 Peptide methionine sulfoxide reductase 46 199 6.5E-68 T 09-03-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 RG43_RS22365 8f4fe1b693cc25614d1e63196dfe9bc0 212 Gene3D G3DSA:3.30.1060.10 7 199 2.7E-81 T 09-03-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 RG43_RS22365 8f4fe1b693cc25614d1e63196dfe9bc0 212 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 43 205 38.986 T 09-03-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 RG43_RS22365 8f4fe1b693cc25614d1e63196dfe9bc0 212 SUPERFAMILY SSF55068 5 208 1.83E-85 T 09-03-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 RG43_RS02015 dee49c32c984d17a3904a2dc6dbfef34 173 Hamap MF_00109 Shikimate kinase [aroK]. 4 171 29.319 T 09-03-2017 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 RG43_RS02015 dee49c32c984d17a3904a2dc6dbfef34 173 Pfam PF01202 Shikimate kinase 13 170 9.7E-57 T 09-03-2017 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 RG43_RS02015 dee49c32c984d17a3904a2dc6dbfef34 173 PRINTS PR01100 Shikimate kinase family signature 59 67 3.5E-29 T 09-03-2017 RG43_RS02015 dee49c32c984d17a3904a2dc6dbfef34 173 PRINTS PR01100 Shikimate kinase family signature 98 115 3.5E-29 T 09-03-2017 RG43_RS02015 dee49c32c984d17a3904a2dc6dbfef34 173 PRINTS PR01100 Shikimate kinase family signature 7 22 3.5E-29 T 09-03-2017 RG43_RS02015 dee49c32c984d17a3904a2dc6dbfef34 173 PRINTS PR01100 Shikimate kinase family signature 31 44 3.5E-29 T 09-03-2017 RG43_RS02015 dee49c32c984d17a3904a2dc6dbfef34 173 PRINTS PR01100 Shikimate kinase family signature 77 86 3.5E-29 T 09-03-2017 RG43_RS02015 dee49c32c984d17a3904a2dc6dbfef34 173 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 09-03-2017 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 RG43_RS02015 dee49c32c984d17a3904a2dc6dbfef34 173 Gene3D G3DSA:3.40.50.300 2 172 1.4E-58 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS02015 dee49c32c984d17a3904a2dc6dbfef34 173 SUPERFAMILY SSF52540 4 170 1.07E-34 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS00875 59a76c1206cf989df1e6268cea64f44d 157 SUPERFAMILY SSF54862 1 145 3.66E-42 T 09-03-2017 RG43_RS00875 59a76c1206cf989df1e6268cea64f44d 157 Gene3D G3DSA:3.30.70.20 68 95 3.0E-14 T 09-03-2017 RG43_RS00875 59a76c1206cf989df1e6268cea64f44d 157 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS00875 59a76c1206cf989df1e6268cea64f44d 157 Gene3D G3DSA:3.30.70.20 6 67 1.0E-9 T 09-03-2017 RG43_RS00875 59a76c1206cf989df1e6268cea64f44d 157 Gene3D G3DSA:3.30.70.20 96 150 2.2E-16 T 09-03-2017 RG43_RS00875 59a76c1206cf989df1e6268cea64f44d 157 Pfam PF13247 4Fe-4S dicluster domain 56 141 1.3E-12 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS26570 eeef72c0a541ded234582cd4090a8cf9 395 Gene3D G3DSA:3.40.640.10 6 258 9.9E-75 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS26570 eeef72c0a541ded234582cd4090a8cf9 395 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 8 394 4.2E-171 T 09-03-2017 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 RG43_RS26570 eeef72c0a541ded234582cd4090a8cf9 395 Gene3D G3DSA:3.90.1150.10 259 394 2.8E-40 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RG43_RS26570 eeef72c0a541ded234582cd4090a8cf9 395 SUPERFAMILY SSF53383 31 393 2.7E-90 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS26570 eeef72c0a541ded234582cd4090a8cf9 395 PIRSF PIRSF001434 1 395 4.1E-121 T 09-03-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 RG43_RS26570 eeef72c0a541ded234582cd4090a8cf9 395 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 202 216 - T 09-03-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 RG43_RS26570 eeef72c0a541ded234582cd4090a8cf9 395 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 391 7.1E-123 T 09-03-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 RG43_RS04195 eeef72c0a541ded234582cd4090a8cf9 395 Gene3D G3DSA:3.40.640.10 6 258 9.9E-75 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS04195 eeef72c0a541ded234582cd4090a8cf9 395 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 8 394 4.2E-171 T 09-03-2017 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 RG43_RS04195 eeef72c0a541ded234582cd4090a8cf9 395 Gene3D G3DSA:3.90.1150.10 259 394 2.8E-40 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RG43_RS04195 eeef72c0a541ded234582cd4090a8cf9 395 SUPERFAMILY SSF53383 31 393 2.7E-90 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS04195 eeef72c0a541ded234582cd4090a8cf9 395 PIRSF PIRSF001434 1 395 4.1E-121 T 09-03-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 RG43_RS04195 eeef72c0a541ded234582cd4090a8cf9 395 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 202 216 - T 09-03-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 RG43_RS04195 eeef72c0a541ded234582cd4090a8cf9 395 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 391 7.1E-123 T 09-03-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 RG43_RS22270 e2e7bcbf08ca81f5cbd318bbe352e6d2 473 SUPERFAMILY SSF55604 11 81 4.58E-17 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RG43_RS22270 e2e7bcbf08ca81f5cbd318bbe352e6d2 473 Pfam PF02378 Phosphotransferase system, EIIC 113 405 1.7E-31 T 09-03-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 RG43_RS22270 e2e7bcbf08ca81f5cbd318bbe352e6d2 473 Gene3D G3DSA:3.30.1360.60 8 83 4.1E-20 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RG43_RS22270 e2e7bcbf08ca81f5cbd318bbe352e6d2 473 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 31 112 6.8E-20 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RG43_RS22270 e2e7bcbf08ca81f5cbd318bbe352e6d2 473 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 8 461 2.1E-222 T 09-03-2017 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 RG43_RS22270 e2e7bcbf08ca81f5cbd318bbe352e6d2 473 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 22 39 - T 09-03-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 RG43_RS22270 e2e7bcbf08ca81f5cbd318bbe352e6d2 473 Pfam PF00367 phosphotransferase system, EIIB 13 40 6.1E-9 T 09-03-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 RG43_RS22270 e2e7bcbf08ca81f5cbd318bbe352e6d2 473 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 164 448 8.9E-88 T 09-03-2017 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 RG43_RS17810 aa1850cecd91c93819fdbe80fd300530 155 SUPERFAMILY SSF55486 3 151 3.17E-50 T 09-03-2017 RG43_RS17810 aa1850cecd91c93819fdbe80fd300530 155 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 114 124 - T 09-03-2017 IPR020549 Endoribonuclease YbeY, conserved site RG43_RS17810 aa1850cecd91c93819fdbe80fd300530 155 Pfam PF02130 Uncharacterized protein family UPF0054 20 142 6.9E-39 T 09-03-2017 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 RG43_RS17810 aa1850cecd91c93819fdbe80fd300530 155 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 5 148 24.498 T 09-03-2017 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 RG43_RS17810 aa1850cecd91c93819fdbe80fd300530 155 Gene3D G3DSA:3.40.390.30 12 153 9.9E-52 T 09-03-2017 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 RG43_RS17810 aa1850cecd91c93819fdbe80fd300530 155 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 40 144 3.9E-37 T 09-03-2017 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 RG43_RS15500 2979f2efa419f664e9ee7a879ecec272 230 SUPERFAMILY SSF52499 5 221 7.06E-56 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RG43_RS15500 2979f2efa419f664e9ee7a879ecec272 230 Hamap MF_00830 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB [rutB]. 1 228 60.829 T 09-03-2017 IPR019916 Isochorismatase, RutB GO:0016811 KEGG: 00240+3.5.1.110|KEGG: 00311+3.5.1.11 RG43_RS15500 2979f2efa419f664e9ee7a879ecec272 230 Pfam PF00857 Isochorismatase family 18 215 5.4E-39 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RG43_RS15500 2979f2efa419f664e9ee7a879ecec272 230 Gene3D G3DSA:3.40.50.850 3 223 1.0E-64 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RG43_RS15500 2979f2efa419f664e9ee7a879ecec272 230 TIGRFAM TIGR03614 RutB: pyrimidine utilization protein B 3 226 5.8E-138 T 09-03-2017 IPR019916 Isochorismatase, RutB GO:0016811 KEGG: 00240+3.5.1.110|KEGG: 00311+3.5.1.11 RG43_RS14160 44ff7abacc7718da96f3c3a88d617a3b 397 Gene3D G3DSA:3.40.50.1100 97 176 6.8E-21 T 09-03-2017 RG43_RS14160 44ff7abacc7718da96f3c3a88d617a3b 397 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 2 391 49.182 T 09-03-2017 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 RG43_RS14160 44ff7abacc7718da96f3c3a88d617a3b 397 SUPERFAMILY SSF53686 5 390 1.2E-141 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RG43_RS14160 44ff7abacc7718da96f3c3a88d617a3b 397 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 8 389 7.9E-189 T 09-03-2017 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 RG43_RS14160 44ff7abacc7718da96f3c3a88d617a3b 397 PIRSF PIRSF001413 1 397 1.9E-172 T 09-03-2017 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 RG43_RS14160 44ff7abacc7718da96f3c3a88d617a3b 397 Gene3D G3DSA:3.40.50.1100 177 392 7.7E-93 T 09-03-2017 RG43_RS14160 44ff7abacc7718da96f3c3a88d617a3b 397 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 80 94 - T 09-03-2017 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 RG43_RS14160 44ff7abacc7718da96f3c3a88d617a3b 397 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 52 374 1.2E-50 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RG43_RS11830 db91d5b8dd50523dc2c144542a50cb00 435 Gene3D G3DSA:3.40.250.10 140 278 1.4E-35 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS11830 db91d5b8dd50523dc2c144542a50cb00 435 SMART SM00450 26 139 4.1E-5 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS11830 db91d5b8dd50523dc2c144542a50cb00 435 SMART SM00450 294 422 1.8E-15 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS11830 db91d5b8dd50523dc2c144542a50cb00 435 SMART SM00450 146 267 2.8E-19 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS11830 db91d5b8dd50523dc2c144542a50cb00 435 Pfam PF00581 Rhodanese-like domain 179 263 1.1E-11 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS11830 db91d5b8dd50523dc2c144542a50cb00 435 Pfam PF00581 Rhodanese-like domain 297 418 8.9E-12 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS11830 db91d5b8dd50523dc2c144542a50cb00 435 SUPERFAMILY SSF52821 288 428 1.44E-31 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS11830 db91d5b8dd50523dc2c144542a50cb00 435 Gene3D G3DSA:3.40.250.10 10 128 5.9E-12 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS11830 db91d5b8dd50523dc2c144542a50cb00 435 SUPERFAMILY SSF52821 33 128 1.05E-8 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS11830 db91d5b8dd50523dc2c144542a50cb00 435 ProSitePatterns PS00683 Rhodanese C-terminal signature. 406 416 - T 09-03-2017 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 RG43_RS11830 db91d5b8dd50523dc2c144542a50cb00 435 ProSitePatterns PS00380 Rhodanese signature 1. 181 192 - T 09-03-2017 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 RG43_RS11830 db91d5b8dd50523dc2c144542a50cb00 435 Gene3D G3DSA:3.40.250.10 289 428 3.6E-32 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS11830 db91d5b8dd50523dc2c144542a50cb00 435 SUPERFAMILY SSF52821 141 275 2.88E-27 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS22520 eb3b97ed13530ca6568258f44c46e3b4 131 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.683 T 09-03-2017 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 RG43_RS22520 eb3b97ed13530ca6568258f44c46e3b4 131 SUPERFAMILY SSF54995 1 103 1.02E-37 T 09-03-2017 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS22520 eb3b97ed13530ca6568258f44c46e3b4 131 Pfam PF01250 Ribosomal protein S6 3 91 3.2E-28 T 09-03-2017 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS22520 eb3b97ed13530ca6568258f44c46e3b4 131 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 09-03-2017 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 RG43_RS22520 eb3b97ed13530ca6568258f44c46e3b4 131 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 3.3E-39 T 09-03-2017 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS22520 eb3b97ed13530ca6568258f44c46e3b4 131 Gene3D G3DSA:3.30.70.60 1 103 3.8E-42 T 09-03-2017 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 RG43_RS03680 86924386edb2626cf45a62d6c0f97b4b 550 Pfam PF08479 POTRA domain, ShlB-type 65 141 1.1E-22 T 09-03-2017 IPR013686 Polypeptide-transport-associated, ShlB-type RG43_RS03680 86924386edb2626cf45a62d6c0f97b4b 550 PIRSF PIRSF029745 1 550 8.1E-159 T 09-03-2017 IPR027282 Two partner secretion pathway transporter GO:0015031 RG43_RS03680 86924386edb2626cf45a62d6c0f97b4b 550 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 161 492 4.0E-34 T 09-03-2017 IPR005565 Haemolysin activator HlyB RG43_RS03680 86924386edb2626cf45a62d6c0f97b4b 550 Gene3D G3DSA:2.40.160.50 172 546 5.8E-132 T 09-03-2017 RG43_RS03680 86924386edb2626cf45a62d6c0f97b4b 550 Gene3D G3DSA:3.10.20.310 61 141 1.6E-22 T 09-03-2017 RG43_RS25400 c2e6180a4efd6a519622d77f80b13e48 498 Gene3D G3DSA:3.40.50.300 25 183 4.5E-16 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25400 c2e6180a4efd6a519622d77f80b13e48 498 SUPERFAMILY SSF52540 12 264 4.75E-19 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25400 c2e6180a4efd6a519622d77f80b13e48 498 Pfam PF12592 Protein of unknown function (DUF3763) 444 497 3.6E-22 T 09-03-2017 IPR022547 ATPase, RavA, C-terminal GO:0016820 RG43_RS25400 c2e6180a4efd6a519622d77f80b13e48 498 Pfam PF07728 AAA domain (dynein-related subfamily) 41 171 6.3E-25 T 09-03-2017 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 RG43_RS25400 c2e6180a4efd6a519622d77f80b13e48 498 Hamap MF_01625 ATPase RavA [ravA]. 1 498 59.095 T 09-03-2017 IPR023671 ATPase RavA GO:0005737|GO:0016887 RG43_RS25400 c2e6180a4efd6a519622d77f80b13e48 498 SMART SM00382 38 187 1.6E-5 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS05405 4e0e9f71079e9e1d0efcb96ac63a7513 541 TIGRFAM TIGR03309 matur_yqeB: selenium-dependent molybdenum hydroxylase system protein, YqeB family 271 526 2.2E-125 T 09-03-2017 IPR017695 Selenium-dependent molybdenum hydroxylase system protein, YqeB family RG43_RS05405 4e0e9f71079e9e1d0efcb96ac63a7513 541 Pfam PF13478 XdhC Rossmann domain 106 247 2.9E-31 T 09-03-2017 IPR027051 XdhC Rossmann domain RG43_RS05405 4e0e9f71079e9e1d0efcb96ac63a7513 541 SUPERFAMILY SSF53187 410 489 2.51E-6 T 09-03-2017 RG43_RS05405 4e0e9f71079e9e1d0efcb96ac63a7513 541 Gene3D G3DSA:2.40.50.100 433 481 6.1E-6 T 09-03-2017 RG43_RS05405 4e0e9f71079e9e1d0efcb96ac63a7513 541 Pfam PF02625 XdhC and CoxI family 12 73 2.8E-16 T 09-03-2017 IPR003777 XdhC- CoxI RG43_RS02730 73d2ba4e5d849d4bc6ef9989dcc9beba 347 SUPERFAMILY SSF53067 153 340 3.69E-50 T 09-03-2017 RG43_RS02730 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 1.2E-65 T 09-03-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RG43_RS02730 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 1.2E-65 T 09-03-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RG43_RS02730 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 1.2E-65 T 09-03-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RG43_RS02730 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 1.2E-65 T 09-03-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RG43_RS02730 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 1.2E-65 T 09-03-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RG43_RS02730 73d2ba4e5d849d4bc6ef9989dcc9beba 347 SUPERFAMILY SSF53067 9 152 8.89E-38 T 09-03-2017 RG43_RS02730 73d2ba4e5d849d4bc6ef9989dcc9beba 347 Pfam PF06723 MreB/Mbl protein 11 338 1.4E-150 T 09-03-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RG43_RS02730 73d2ba4e5d849d4bc6ef9989dcc9beba 347 Gene3D G3DSA:3.30.420.40 9 163 1.8E-46 T 09-03-2017 RG43_RS02730 73d2ba4e5d849d4bc6ef9989dcc9beba 347 Gene3D G3DSA:3.90.640.10 191 263 8.7E-31 T 09-03-2017 RG43_RS02730 73d2ba4e5d849d4bc6ef9989dcc9beba 347 Gene3D G3DSA:3.30.420.40 267 321 2.1E-35 T 09-03-2017 RG43_RS02730 73d2ba4e5d849d4bc6ef9989dcc9beba 347 Gene3D G3DSA:3.30.420.40 164 190 2.1E-35 T 09-03-2017 RG43_RS02730 73d2ba4e5d849d4bc6ef9989dcc9beba 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 9.6E-171 T 09-03-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RG43_RS24950 7c63e20ca1b4c21ceb26cd202ba019a2 665 TIGRFAM TIGR00232 tktlase_bact: transketolase 6 664 8.7E-304 T 09-03-2017 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 RG43_RS24950 7c63e20ca1b4c21ceb26cd202ba019a2 665 SUPERFAMILY SSF52518 335 525 2.59E-64 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS24950 7c63e20ca1b4c21ceb26cd202ba019a2 665 Gene3D G3DSA:3.40.50.970 326 533 6.4E-76 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS24950 7c63e20ca1b4c21ceb26cd202ba019a2 665 Pfam PF02780 Transketolase, C-terminal domain 540 655 2.6E-17 T 09-03-2017 IPR033248 Transketolase, C-terminal domain RG43_RS24950 7c63e20ca1b4c21ceb26cd202ba019a2 665 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 333 3.5E-162 T 09-03-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 RG43_RS24950 7c63e20ca1b4c21ceb26cd202ba019a2 665 SMART SM00861 354 525 7.8E-62 T 09-03-2017 IPR005475 Transketolase-like, pyrimidine-binding domain RG43_RS24950 7c63e20ca1b4c21ceb26cd202ba019a2 665 ProSitePatterns PS00801 Transketolase signature 1. 11 31 - T 09-03-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 RG43_RS24950 7c63e20ca1b4c21ceb26cd202ba019a2 665 SUPERFAMILY SSF52922 533 664 8.11E-42 T 09-03-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RG43_RS24950 7c63e20ca1b4c21ceb26cd202ba019a2 665 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 09-03-2017 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 RG43_RS24950 7c63e20ca1b4c21ceb26cd202ba019a2 665 Gene3D G3DSA:3.40.50.970 4 320 6.4E-132 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS24950 7c63e20ca1b4c21ceb26cd202ba019a2 665 Gene3D G3DSA:3.40.50.920 538 664 1.5E-48 T 09-03-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RG43_RS24950 7c63e20ca1b4c21ceb26cd202ba019a2 665 SUPERFAMILY SSF52518 4 320 2.68E-121 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS24950 7c63e20ca1b4c21ceb26cd202ba019a2 665 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 5.6E-43 T 09-03-2017 IPR005475 Transketolase-like, pyrimidine-binding domain RG43_RS20070 3bfb17acb1246e587efe0649588a8b95 579 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 56 3.2E-36 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 RG43_RS20070 3bfb17acb1246e587efe0649588a8b95 579 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 19 35 3.2E-36 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 RG43_RS20070 3bfb17acb1246e587efe0649588a8b95 579 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 119 133 3.2E-36 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 RG43_RS20070 3bfb17acb1246e587efe0649588a8b95 579 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 68 85 3.2E-36 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 RG43_RS20070 3bfb17acb1246e587efe0649588a8b95 579 Pfam PF00771 FHIPEP family 9 570 2.5E-186 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 RG43_RS20070 3bfb17acb1246e587efe0649588a8b95 579 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 24 47 - T 09-03-2017 IPR025505 FHIPEP conserved site RG43_RS19620 37b132fd497a0ce7e2756540995eed44 196 ProDom PD116027 TRANSCRIPTION DNA-BINDING REGULATION RMBA YQEH ORF3-QACEDELTA1 FUSION CYTOPLASMIC ECS3703 TRANSMEMBRANE 19 195 3.0E-9 T 09-03-2017 RG43_RS19620 37b132fd497a0ce7e2756540995eed44 196 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 187 1.3E-11 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS19620 37b132fd497a0ce7e2756540995eed44 196 Gene3D G3DSA:1.10.10.10 143 187 7.7E-12 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS19620 37b132fd497a0ce7e2756540995eed44 196 SUPERFAMILY SSF46894 139 187 5.78E-12 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RG43_RS19620 37b132fd497a0ce7e2756540995eed44 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 145 159 1.2E-7 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS19620 37b132fd497a0ce7e2756540995eed44 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 175 1.2E-7 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS19620 37b132fd497a0ce7e2756540995eed44 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 187 1.2E-7 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS19620 37b132fd497a0ce7e2756540995eed44 196 SMART SM00421 142 195 0.0012 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS13245 713b124f04bd6899f5a8fa0a91ccce2f 658 SUPERFAMILY SSF55718 536 658 3.06E-38 T 09-03-2017 IPR003033 SCP2 sterol-binding domain RG43_RS13245 713b124f04bd6899f5a8fa0a91ccce2f 658 Pfam PF14863 Alkyl sulfatase dimerisation 388 526 2.0E-60 T 09-03-2017 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 RG43_RS13245 713b124f04bd6899f5a8fa0a91ccce2f 658 Pfam PF14864 Alkyl sulfatase C-terminal 534 658 2.0E-41 T 09-03-2017 IPR029229 Alkyl sulfatase, C-terminal RG43_RS13245 713b124f04bd6899f5a8fa0a91ccce2f 658 SMART SM00849 129 351 1.9E-24 T 09-03-2017 IPR001279 Metallo-beta-lactamase RG43_RS13245 713b124f04bd6899f5a8fa0a91ccce2f 658 SUPERFAMILY SSF56281 29 530 1.25E-151 T 09-03-2017 IPR001279 Metallo-beta-lactamase RG43_RS13245 713b124f04bd6899f5a8fa0a91ccce2f 658 Gene3D G3DSA:3.60.15.10 258 382 9.2E-40 T 09-03-2017 IPR001279 Metallo-beta-lactamase RG43_RS13245 713b124f04bd6899f5a8fa0a91ccce2f 658 Gene3D G3DSA:3.60.15.10 114 215 9.2E-40 T 09-03-2017 IPR001279 Metallo-beta-lactamase RG43_RS13245 713b124f04bd6899f5a8fa0a91ccce2f 658 Pfam PF00753 Metallo-beta-lactamase superfamily 126 351 2.9E-37 T 09-03-2017 IPR001279 Metallo-beta-lactamase RG43_RS13245 713b124f04bd6899f5a8fa0a91ccce2f 658 Gene3D G3DSA:3.30.1050.10 543 648 2.5E-12 T 09-03-2017 IPR003033 SCP2 sterol-binding domain RG43_RS05835 e6fb98e67aac1ccf95cfe75f030df675 438 SUPERFAMILY SSF103473 20 431 1.83E-42 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS05835 e6fb98e67aac1ccf95cfe75f030df675 438 Gene3D G3DSA:1.20.1250.20 28 233 4.8E-19 T 09-03-2017 RG43_RS05835 e6fb98e67aac1ccf95cfe75f030df675 438 Pfam PF07690 Major Facilitator Superfamily 33 387 1.1E-19 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS05835 e6fb98e67aac1ccf95cfe75f030df675 438 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 24 432 1.3E-204 T 09-03-2017 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 RG43_RS05835 e6fb98e67aac1ccf95cfe75f030df675 438 Gene3D G3DSA:1.20.1250.20 256 431 6.3E-6 T 09-03-2017 RG43_RS14265 ef53e7871d4d8fecc44163dcf6a210be 222 Pfam PF05869 DNA N-6-adenine-methyltransferase (Dam) 15 154 4.3E-14 T 09-03-2017 IPR008593 DNA N-6-adenine-methyltransferase GO:0003677|GO:0009007|GO:0032775 RG43_RS14265 ef53e7871d4d8fecc44163dcf6a210be 222 Gene3D G3DSA:1.10.10.60 177 217 4.6E-4 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS12010 6adaa1c3ea31aa091c4f391d7fd85117 309 Pfam PF00294 pfkB family carbohydrate kinase 12 296 2.9E-65 T 09-03-2017 IPR011611 Carbohydrate kinase PfkB RG43_RS12010 6adaa1c3ea31aa091c4f391d7fd85117 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 250 263 - T 09-03-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RG43_RS12010 6adaa1c3ea31aa091c4f391d7fd85117 309 SUPERFAMILY SSF53613 4 297 1.56E-63 T 09-03-2017 IPR029056 Ribokinase-like RG43_RS12010 6adaa1c3ea31aa091c4f391d7fd85117 309 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 4 305 1.4E-96 T 09-03-2017 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 RG43_RS12010 6adaa1c3ea31aa091c4f391d7fd85117 309 PIRSF PIRSF000535 1 309 6.9E-112 T 09-03-2017 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 RG43_RS12010 6adaa1c3ea31aa091c4f391d7fd85117 309 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 38 62 - T 09-03-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RG43_RS12010 6adaa1c3ea31aa091c4f391d7fd85117 309 Gene3D G3DSA:3.40.1190.20 35 305 2.2E-75 T 09-03-2017 IPR029056 Ribokinase-like RG43_RS07005 a39385d9f62c4ade5bbf239d477c3f9f 327 Pfam PF13407 Periplasmic binding protein domain 40 294 4.2E-31 T 09-03-2017 IPR025997 Periplasmic binding protein RG43_RS07005 a39385d9f62c4ade5bbf239d477c3f9f 327 SUPERFAMILY SSF53822 29 312 5.01E-47 T 09-03-2017 IPR028082 Periplasmic binding protein-like I RG43_RS07005 a39385d9f62c4ade5bbf239d477c3f9f 327 Gene3D G3DSA:3.40.50.2300 157 312 8.2E-25 T 09-03-2017 RG43_RS07005 a39385d9f62c4ade5bbf239d477c3f9f 327 Gene3D G3DSA:3.40.50.2300 31 156 3.3E-28 T 09-03-2017 RG43_RS00755 5215cd7a33c9b5a15894f28509632385 378 Pfam PF00529 HlyD membrane-fusion protein of T1SS 13 367 1.9E-13 T 09-03-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RG43_RS00755 5215cd7a33c9b5a15894f28509632385 378 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 66 301 1.9E-9 T 09-03-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RG43_RS00755 5215cd7a33c9b5a15894f28509632385 378 SUPERFAMILY SSF111369 167 267 1.28E-5 T 09-03-2017 RG43_RS00755 5215cd7a33c9b5a15894f28509632385 378 Gene3D G3DSA:2.40.50.100 65 96 6.4E-14 T 09-03-2017 RG43_RS00755 5215cd7a33c9b5a15894f28509632385 378 Gene3D G3DSA:2.40.50.100 219 243 6.4E-14 T 09-03-2017 RG43_RS00755 5215cd7a33c9b5a15894f28509632385 378 SUPERFAMILY SSF111369 60 133 5.36E-11 T 09-03-2017 RG43_RS04355 97f805cdf7d290b6e17f16d84ee6b790 577 SUPERFAMILY SSF56801 22 355 5.23E-94 T 09-03-2017 RG43_RS04355 97f805cdf7d290b6e17f16d84ee6b790 577 SUPERFAMILY SSF56801 384 565 5.23E-94 T 09-03-2017 RG43_RS04355 97f805cdf7d290b6e17f16d84ee6b790 577 Pfam PF00501 AMP-binding enzyme 47 468 2.6E-71 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RG43_RS04355 97f805cdf7d290b6e17f16d84ee6b790 577 Gene3D G3DSA:3.30.300.30 461 562 3.5E-22 T 09-03-2017 RG43_RS04355 97f805cdf7d290b6e17f16d84ee6b790 577 Gene3D G3DSA:2.30.38.10 388 460 1.0E-16 T 09-03-2017 RG43_RS04355 97f805cdf7d290b6e17f16d84ee6b790 577 Gene3D G3DSA:3.40.50.980 47 187 9.4E-25 T 09-03-2017 RG43_RS04355 97f805cdf7d290b6e17f16d84ee6b790 577 Gene3D G3DSA:3.40.50.980 188 350 5.4E-31 T 09-03-2017 RG43_RS26730 97f805cdf7d290b6e17f16d84ee6b790 577 SUPERFAMILY SSF56801 22 355 5.23E-94 T 09-03-2017 RG43_RS26730 97f805cdf7d290b6e17f16d84ee6b790 577 SUPERFAMILY SSF56801 384 565 5.23E-94 T 09-03-2017 RG43_RS26730 97f805cdf7d290b6e17f16d84ee6b790 577 Pfam PF00501 AMP-binding enzyme 47 468 2.6E-71 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RG43_RS26730 97f805cdf7d290b6e17f16d84ee6b790 577 Gene3D G3DSA:3.30.300.30 461 562 3.5E-22 T 09-03-2017 RG43_RS26730 97f805cdf7d290b6e17f16d84ee6b790 577 Gene3D G3DSA:2.30.38.10 388 460 1.0E-16 T 09-03-2017 RG43_RS26730 97f805cdf7d290b6e17f16d84ee6b790 577 Gene3D G3DSA:3.40.50.980 47 187 9.4E-25 T 09-03-2017 RG43_RS26730 97f805cdf7d290b6e17f16d84ee6b790 577 Gene3D G3DSA:3.40.50.980 188 350 5.4E-31 T 09-03-2017 RG43_RS22685 3cf4551f131dd653f0227023b6c1c1fb 153 Gene3D G3DSA:3.40.50.300 4 150 6.5E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS22685 3cf4551f131dd653f0227023b6c1c1fb 153 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 140 1.1E-59 T 09-03-2017 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 RG43_RS22685 3cf4551f131dd653f0227023b6c1c1fb 153 SUPERFAMILY SSF52540 29 131 9.25E-25 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS22685 3cf4551f131dd653f0227023b6c1c1fb 153 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 133 2.2E-42 T 09-03-2017 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 RG43_RS19370 4c0a13d922ba4ff54bbfb14a82ab9e16 349 Gene3D G3DSA:3.90.180.10 1 179 8.9E-64 T 09-03-2017 IPR011032 GroES-like RG43_RS19370 4c0a13d922ba4ff54bbfb14a82ab9e16 349 Gene3D G3DSA:3.40.50.720 180 292 3.1E-26 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS19370 4c0a13d922ba4ff54bbfb14a82ab9e16 349 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 09-03-2017 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 RG43_RS19370 4c0a13d922ba4ff54bbfb14a82ab9e16 349 Pfam PF00107 Zinc-binding dehydrogenase 185 308 2.4E-27 T 09-03-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RG43_RS19370 4c0a13d922ba4ff54bbfb14a82ab9e16 349 SUPERFAMILY SSF50129 4 171 3.2E-49 T 09-03-2017 IPR011032 GroES-like RG43_RS19370 4c0a13d922ba4ff54bbfb14a82ab9e16 349 SUPERFAMILY SSF51735 151 312 9.01E-44 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS19370 4c0a13d922ba4ff54bbfb14a82ab9e16 349 SMART SM00829 7 342 1.7E-4 T 09-03-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RG43_RS19370 4c0a13d922ba4ff54bbfb14a82ab9e16 349 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 142 4.8E-27 T 09-03-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RG43_RS19370 4c0a13d922ba4ff54bbfb14a82ab9e16 349 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 178 205 - T 09-03-2017 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RG43_RS23250 76635f8a56e570f6f20fa99c4a0a78c1 223 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 26 7.2E-4 T 09-03-2017 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RG43_RS23250 76635f8a56e570f6f20fa99c4a0a78c1 223 Gene3D G3DSA:3.30.70.20 129 165 1.1E-14 T 09-03-2017 RG43_RS23250 76635f8a56e570f6f20fa99c4a0a78c1 223 Pfam PF13247 4Fe-4S dicluster domain 83 181 2.3E-24 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS23250 76635f8a56e570f6f20fa99c4a0a78c1 223 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 125 136 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS23250 76635f8a56e570f6f20fa99c4a0a78c1 223 SUPERFAMILY SSF54862 36 215 3.77E-64 T 09-03-2017 RG43_RS23250 76635f8a56e570f6f20fa99c4a0a78c1 223 Pfam PF00037 4Fe-4S binding domain 40 56 1.6E-4 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS23250 76635f8a56e570f6f20fa99c4a0a78c1 223 Gene3D G3DSA:3.30.70.20 166 210 7.0E-34 T 09-03-2017 RG43_RS23250 76635f8a56e570f6f20fa99c4a0a78c1 223 Gene3D G3DSA:3.30.70.20 36 95 7.0E-34 T 09-03-2017 RG43_RS23250 76635f8a56e570f6f20fa99c4a0a78c1 223 TIGRFAM TIGR03149 cyt_nit_nrfC: cytochrome c nitrite reductase, Fe-S protein 2 222 1.2E-126 T 09-03-2017 IPR017567 Cytochrome c nitrite reductase, Fe-S protein RG43_RS23250 76635f8a56e570f6f20fa99c4a0a78c1 223 Gene3D G3DSA:3.30.70.20 96 128 6.1E-12 T 09-03-2017 RG43_RS23760 778d1f4857f598e06e4a40b03c0153f2 1407 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1315 1.4E-77 T 09-03-2017 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RG43_RS23760 778d1f4857f598e06e4a40b03c0153f2 1407 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1367 0.0 T 09-03-2017 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RG43_RS23760 778d1f4857f598e06e4a40b03c0153f2 1407 SMART SM00663 235 514 1.1E-184 T 09-03-2017 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RG43_RS23760 778d1f4857f598e06e4a40b03c0153f2 1407 Gene3D G3DSA:2.40.50.100 1156 1211 5.1E-6 T 09-03-2017 RG43_RS23760 778d1f4857f598e06e4a40b03c0153f2 1407 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 7.1E-90 T 09-03-2017 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RG43_RS23760 778d1f4857f598e06e4a40b03c0153f2 1407 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 1.9E-18 T 09-03-2017 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RG43_RS23760 778d1f4857f598e06e4a40b03c0153f2 1407 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 4.3E-27 T 09-03-2017 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RG43_RS23760 778d1f4857f598e06e4a40b03c0153f2 1407 Gene3D G3DSA:2.40.40.20 417 489 2.8E-37 T 09-03-2017 RG43_RS23760 778d1f4857f598e06e4a40b03c0153f2 1407 Gene3D G3DSA:2.40.40.20 349 376 2.8E-37 T 09-03-2017 RG43_RS23760 778d1f4857f598e06e4a40b03c0153f2 1407 Pfam PF00623 RNA polymerase Rpb1, domain 2 392 485 3.8E-27 T 09-03-2017 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RG43_RS23760 778d1f4857f598e06e4a40b03c0153f2 1407 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 393 1.2E-7 T 09-03-2017 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RG43_RS23760 778d1f4857f598e06e4a40b03c0153f2 1407 Hamap MF_01323 DNA-directed RNA polymerase subunit gamma [rpoC1]. 13 742 32.24 T 09-03-2017 RG43_RS23760 778d1f4857f598e06e4a40b03c0153f2 1407 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 15 1377 10.439 T 09-03-2017 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RG43_RS23760 778d1f4857f598e06e4a40b03c0153f2 1407 SUPERFAMILY SSF64484 1133 1363 0.0 T 09-03-2017 RG43_RS23760 778d1f4857f598e06e4a40b03c0153f2 1407 SUPERFAMILY SSF64484 16 944 0.0 T 09-03-2017 RG43_RS16330 956844785054908e749453b58a999e6e 317 SUPERFAMILY SSF161098 27 308 3.79E-57 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS16330 956844785054908e749453b58a999e6e 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 313 2.5E-23 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS16330 956844785054908e749453b58a999e6e 317 Gene3D G3DSA:1.10.3720.10 26 306 4.2E-51 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS14155 6d19ac99ab28e638a0cbfaf22cdc70d6 453 Pfam PF00218 Indole-3-glycerol phosphate synthase 6 252 9.3E-100 T 09-03-2017 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 RG43_RS14155 6d19ac99ab28e638a0cbfaf22cdc70d6 453 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 4 255 35.548 T 09-03-2017 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 RG43_RS14155 6d19ac99ab28e638a0cbfaf22cdc70d6 453 SUPERFAMILY SSF51366 2 252 1.77E-85 T 09-03-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RG43_RS14155 6d19ac99ab28e638a0cbfaf22cdc70d6 453 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 256 453 28.583 T 09-03-2017 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 RG43_RS14155 6d19ac99ab28e638a0cbfaf22cdc70d6 453 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 258 448 6.4E-63 T 09-03-2017 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 RG43_RS14155 6d19ac99ab28e638a0cbfaf22cdc70d6 453 Gene3D G3DSA:3.20.20.70 260 446 1.8E-60 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS14155 6d19ac99ab28e638a0cbfaf22cdc70d6 453 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 51 69 - T 09-03-2017 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 RG43_RS14155 6d19ac99ab28e638a0cbfaf22cdc70d6 453 Gene3D G3DSA:3.20.20.70 2 259 2.1E-104 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS14155 6d19ac99ab28e638a0cbfaf22cdc70d6 453 SUPERFAMILY SSF51366 258 451 6.59E-56 T 09-03-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RG43_RS13755 143ec8c2a06d38ec3436bc291c5e6262 306 Gene3D G3DSA:3.40.50.1820 5 306 9.4E-65 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS13755 143ec8c2a06d38ec3436bc291c5e6262 306 SUPERFAMILY SSF53474 9 143 2.14E-41 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS13755 143ec8c2a06d38ec3436bc291c5e6262 306 SUPERFAMILY SSF53474 194 306 2.14E-41 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS13755 143ec8c2a06d38ec3436bc291c5e6262 306 Pfam PF01738 Dienelactone hydrolase family 28 135 8.6E-9 T 09-03-2017 IPR002925 Dienelactone hydrolase GO:0016787 RG43_RS11620 e278b99aadd0691a7088c1e06d1d9034 583 Pfam PF00501 AMP-binding enzyme 51 482 3.3E-114 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RG43_RS11620 e278b99aadd0691a7088c1e06d1d9034 583 Gene3D G3DSA:3.40.50.980 45 174 4.4E-43 T 09-03-2017 RG43_RS11620 e278b99aadd0691a7088c1e06d1d9034 583 Gene3D G3DSA:3.40.50.980 207 238 4.4E-43 T 09-03-2017 RG43_RS11620 e278b99aadd0691a7088c1e06d1d9034 583 ProSitePatterns PS00455 Putative AMP-binding domain signature. 233 244 - T 09-03-2017 IPR020845 AMP-binding, conserved site RG43_RS11620 e278b99aadd0691a7088c1e06d1d9034 583 Gene3D G3DSA:3.30.300.30 477 574 2.2E-28 T 09-03-2017 RG43_RS11620 e278b99aadd0691a7088c1e06d1d9034 583 Gene3D G3DSA:2.30.38.10 402 473 5.2E-31 T 09-03-2017 RG43_RS11620 e278b99aadd0691a7088c1e06d1d9034 583 Pfam PF13193 AMP-binding enzyme C-terminal domain 491 565 9.5E-17 T 09-03-2017 IPR025110 AMP-binding enzyme C-terminal domain RG43_RS11620 e278b99aadd0691a7088c1e06d1d9034 583 Gene3D G3DSA:3.40.50.980 239 401 9.3E-41 T 09-03-2017 RG43_RS11620 e278b99aadd0691a7088c1e06d1d9034 583 SUPERFAMILY SSF56801 34 577 2.22E-153 T 09-03-2017 RG43_RS12450 38d08015c9b8b3b9bd450d583058ef6f 369 Gene3D G3DSA:3.30.420.40 5 196 9.2E-73 T 09-03-2017 RG43_RS12450 38d08015c9b8b3b9bd450d583058ef6f 369 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 4 367 42.394 T 09-03-2017 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 RG43_RS12450 38d08015c9b8b3b9bd450d583058ef6f 369 SUPERFAMILY SSF53067 66 111 2.68E-27 T 09-03-2017 RG43_RS12450 38d08015c9b8b3b9bd450d583058ef6f 369 SUPERFAMILY SSF53067 143 341 2.68E-27 T 09-03-2017 RG43_RS12450 38d08015c9b8b3b9bd450d583058ef6f 369 SUPERFAMILY SSF53067 5 37 2.68E-27 T 09-03-2017 RG43_RS12450 38d08015c9b8b3b9bd450d583058ef6f 369 Pfam PF03702 Uncharacterised protein family (UPF0075) 5 367 5.5E-178 T 09-03-2017 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 RG43_RS04390 e8578d7d5ba2d947f2534092edc9f0bd 723 Gene3D G3DSA:1.20.1220.12 590 722 8.0E-75 T 09-03-2017 RG43_RS04390 e8578d7d5ba2d947f2534092edc9f0bd 723 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 3 723 0.0 T 09-03-2017 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 RG43_RS04390 e8578d7d5ba2d947f2534092edc9f0bd 723 Pfam PF01274 Malate synthase 18 697 3.0E-198 T 09-03-2017 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 RG43_RS04390 e8578d7d5ba2d947f2534092edc9f0bd 723 SUPERFAMILY SSF51645 4 720 2.09E-291 T 09-03-2017 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 RG43_RS04390 e8578d7d5ba2d947f2534092edc9f0bd 723 Gene3D G3DSA:3.20.20.360 89 135 3.2E-144 T 09-03-2017 RG43_RS04390 e8578d7d5ba2d947f2534092edc9f0bd 723 Gene3D G3DSA:3.20.20.360 334 588 3.2E-144 T 09-03-2017 RG43_RS04390 e8578d7d5ba2d947f2534092edc9f0bd 723 Gene3D G3DSA:3.20.20.360 264 294 3.2E-144 T 09-03-2017 RG43_RS04390 e8578d7d5ba2d947f2534092edc9f0bd 723 Gene3D G3DSA:1.10.1860.10 1 87 2.2E-33 T 09-03-2017 RG43_RS04390 e8578d7d5ba2d947f2534092edc9f0bd 723 Hamap MF_00641 Malate synthase G [glcB]. 1 723 368.936 T 09-03-2017 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 RG43_RS04390 e8578d7d5ba2d947f2534092edc9f0bd 723 Gene3D G3DSA:2.170.170.11 136 262 7.8E-70 T 09-03-2017 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 RG43_RS04390 e8578d7d5ba2d947f2534092edc9f0bd 723 Gene3D G3DSA:2.170.170.11 296 333 7.8E-70 T 09-03-2017 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 RG43_RS26765 e8578d7d5ba2d947f2534092edc9f0bd 723 Gene3D G3DSA:1.20.1220.12 590 722 8.0E-75 T 09-03-2017 RG43_RS26765 e8578d7d5ba2d947f2534092edc9f0bd 723 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 3 723 0.0 T 09-03-2017 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 RG43_RS26765 e8578d7d5ba2d947f2534092edc9f0bd 723 Pfam PF01274 Malate synthase 18 697 3.0E-198 T 09-03-2017 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 RG43_RS26765 e8578d7d5ba2d947f2534092edc9f0bd 723 SUPERFAMILY SSF51645 4 720 2.09E-291 T 09-03-2017 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 RG43_RS26765 e8578d7d5ba2d947f2534092edc9f0bd 723 Gene3D G3DSA:3.20.20.360 89 135 3.2E-144 T 09-03-2017 RG43_RS26765 e8578d7d5ba2d947f2534092edc9f0bd 723 Gene3D G3DSA:3.20.20.360 334 588 3.2E-144 T 09-03-2017 RG43_RS26765 e8578d7d5ba2d947f2534092edc9f0bd 723 Gene3D G3DSA:3.20.20.360 264 294 3.2E-144 T 09-03-2017 RG43_RS26765 e8578d7d5ba2d947f2534092edc9f0bd 723 Gene3D G3DSA:1.10.1860.10 1 87 2.2E-33 T 09-03-2017 RG43_RS26765 e8578d7d5ba2d947f2534092edc9f0bd 723 Hamap MF_00641 Malate synthase G [glcB]. 1 723 368.936 T 09-03-2017 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 RG43_RS26765 e8578d7d5ba2d947f2534092edc9f0bd 723 Gene3D G3DSA:2.170.170.11 136 262 7.8E-70 T 09-03-2017 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 RG43_RS26765 e8578d7d5ba2d947f2534092edc9f0bd 723 Gene3D G3DSA:2.170.170.11 296 333 7.8E-70 T 09-03-2017 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 RG43_RS12545 b108e5a199c0e59b9494d78226bb186f 346 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 134 241 8.9E-20 T 09-03-2017 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 RG43_RS12545 b108e5a199c0e59b9494d78226bb186f 346 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 121 5.2E-25 T 09-03-2017 IPR000683 Oxidoreductase, N-terminal GO:0016491 RG43_RS12545 b108e5a199c0e59b9494d78226bb186f 346 Gene3D G3DSA:3.30.360.10 130 339 1.4E-30 T 09-03-2017 RG43_RS12545 b108e5a199c0e59b9494d78226bb186f 346 Gene3D G3DSA:3.40.50.720 1 129 3.0E-42 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS12545 b108e5a199c0e59b9494d78226bb186f 346 SUPERFAMILY SSF51735 2 192 1.13E-50 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS17685 0791e3a65ee6629fa7d1b8450305c4f7 176 PIRSF PIRSF038996 1 172 2.2E-71 T 09-03-2017 IPR010086 Flavodoxin, long chain GO:0010181 RG43_RS17685 0791e3a65ee6629fa7d1b8450305c4f7 176 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 09-03-2017 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 RG43_RS17685 0791e3a65ee6629fa7d1b8450305c4f7 176 Pfam PF00258 Flavodoxin 6 160 2.8E-34 T 09-03-2017 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 RG43_RS17685 0791e3a65ee6629fa7d1b8450305c4f7 176 Gene3D G3DSA:3.40.50.360 3 168 1.0E-63 T 09-03-2017 IPR029039 Flavoprotein-like domain RG43_RS17685 0791e3a65ee6629fa7d1b8450305c4f7 176 SUPERFAMILY SSF52218 5 170 1.96E-54 T 09-03-2017 IPR029039 Flavoprotein-like domain RG43_RS17685 0791e3a65ee6629fa7d1b8450305c4f7 176 TIGRFAM TIGR01752 flav_long: flavodoxin 4 168 2.6E-78 T 09-03-2017 IPR010086 Flavodoxin, long chain GO:0010181 RG43_RS03640 941f59f71a28f981863485082445609f 75 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 23 72 2.0E-13 T 09-03-2017 IPR010260 Prophage CP4-57 regulatory protein (AlpA) RG43_RS08510 10742ff0919548be801a234d5b7a3eb8 200 PIRSF PIRSF011416 1 200 4.6E-89 T 09-03-2017 IPR011310 Lipopolysaccharide core heptose(II)-phosphate phosphatase GO:0016791 RG43_RS08510 10742ff0919548be801a234d5b7a3eb8 200 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 56 129 9.7E-6 T 09-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 RG43_RS08510 10742ff0919548be801a234d5b7a3eb8 200 Gene3D G3DSA:3.40.50.1240 56 167 4.8E-10 T 09-03-2017 IPR029033 Histidine phosphatase superfamily RG43_RS08510 10742ff0919548be801a234d5b7a3eb8 200 SUPERFAMILY SSF53254 56 180 3.4E-16 T 09-03-2017 IPR029033 Histidine phosphatase superfamily RG43_RS08510 10742ff0919548be801a234d5b7a3eb8 200 Hamap MF_01868 Lipopolysaccharide core heptose(II)-phosphate phosphatase [ais]. 1 200 62.471 T 09-03-2017 IPR011310 Lipopolysaccharide core heptose(II)-phosphate phosphatase GO:0016791 RG43_RS15715 1832851e92585eca839f0e6def69e736 195 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 7 153 1.8E-43 T 09-03-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 RG43_RS15715 1832851e92585eca839f0e6def69e736 195 PRINTS PR00446 Hydrogen uptake protein signature 6 18 2.0E-30 T 09-03-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 RG43_RS15715 1832851e92585eca839f0e6def69e736 195 PRINTS PR00446 Hydrogen uptake protein signature 18 29 2.0E-30 T 09-03-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 RG43_RS15715 1832851e92585eca839f0e6def69e736 195 PRINTS PR00446 Hydrogen uptake protein signature 38 55 2.0E-30 T 09-03-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 RG43_RS15715 1832851e92585eca839f0e6def69e736 195 PRINTS PR00446 Hydrogen uptake protein signature 70 86 2.0E-30 T 09-03-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 RG43_RS15715 1832851e92585eca839f0e6def69e736 195 PRINTS PR00446 Hydrogen uptake protein signature 59 69 2.0E-30 T 09-03-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 RG43_RS15715 1832851e92585eca839f0e6def69e736 195 Pfam PF01750 Hydrogenase maturation protease 23 151 1.7E-40 T 09-03-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 RG43_RS15715 1832851e92585eca839f0e6def69e736 195 SUPERFAMILY SSF53163 6 163 8.37E-43 T 09-03-2017 IPR023430 Peptidase HybD-like domain RG43_RS15715 1832851e92585eca839f0e6def69e736 195 Gene3D G3DSA:3.40.50.1450 6 164 9.9E-49 T 09-03-2017 IPR023430 Peptidase HybD-like domain RG43_RS15715 1832851e92585eca839f0e6def69e736 195 TIGRFAM TIGR00140 hupD: hydrogenase expression/formation protein 6 157 4.3E-61 T 09-03-2017 IPR004419 Peptidase A31, hydrogenase expression/formation protein GO:0016485|GO:0046872 RG43_RS24320 5ba390d0e5804538aead3f2b2372c087 248 Pfam PF08483 IstB-like ATP binding N-terminal 23 51 1.6E-8 T 09-03-2017 IPR013690 IstB-like ATP binding N-terminal RG43_RS24320 5ba390d0e5804538aead3f2b2372c087 248 PIRSF PIRSF003073 1 247 3.5E-68 T 09-03-2017 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein RG43_RS24320 5ba390d0e5804538aead3f2b2372c087 248 Gene3D G3DSA:3.40.50.300 53 228 6.9E-27 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS24320 5ba390d0e5804538aead3f2b2372c087 248 Pfam PF01695 IstB-like ATP binding protein 53 228 1.3E-57 T 09-03-2017 IPR002611 IstB-like ATP-binding protein GO:0005524 RG43_RS24320 5ba390d0e5804538aead3f2b2372c087 248 SMART SM00382 97 230 0.0028 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS24320 5ba390d0e5804538aead3f2b2372c087 248 SUPERFAMILY SSF52540 68 240 7.76E-26 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS26095 5ba390d0e5804538aead3f2b2372c087 248 Pfam PF08483 IstB-like ATP binding N-terminal 23 51 1.6E-8 T 09-03-2017 IPR013690 IstB-like ATP binding N-terminal RG43_RS26095 5ba390d0e5804538aead3f2b2372c087 248 PIRSF PIRSF003073 1 247 3.5E-68 T 09-03-2017 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein RG43_RS26095 5ba390d0e5804538aead3f2b2372c087 248 Gene3D G3DSA:3.40.50.300 53 228 6.9E-27 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS26095 5ba390d0e5804538aead3f2b2372c087 248 Pfam PF01695 IstB-like ATP binding protein 53 228 1.3E-57 T 09-03-2017 IPR002611 IstB-like ATP-binding protein GO:0005524 RG43_RS26095 5ba390d0e5804538aead3f2b2372c087 248 SMART SM00382 97 230 0.0028 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS26095 5ba390d0e5804538aead3f2b2372c087 248 SUPERFAMILY SSF52540 68 240 7.76E-26 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS13500 c2dbe917536d52b5a777bb3794b1dd0f 546 SMART SM00319 47 186 1.4E-49 T 09-03-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 RG43_RS13500 c2dbe917536d52b5a777bb3794b1dd0f 546 Gene3D G3DSA:1.10.287.950 292 496 2.1E-60 T 09-03-2017 RG43_RS13500 c2dbe917536d52b5a777bb3794b1dd0f 546 SUPERFAMILY SSF47170 27 176 3.92E-27 T 09-03-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 RG43_RS13500 c2dbe917536d52b5a777bb3794b1dd0f 546 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 336 523 2.4E-66 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RG43_RS13500 c2dbe917536d52b5a777bb3794b1dd0f 546 Gene3D G3DSA:1.20.120.30 62 164 4.1E-8 T 09-03-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 RG43_RS13500 c2dbe917536d52b5a777bb3794b1dd0f 546 Pfam PF00672 HAMP domain 205 271 2.5E-14 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RG43_RS13500 c2dbe917536d52b5a777bb3794b1dd0f 546 SMART SM00304 224 276 1.0E-9 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RG43_RS13500 c2dbe917536d52b5a777bb3794b1dd0f 546 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 302 324 - T 09-03-2017 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site RG43_RS13500 c2dbe917536d52b5a777bb3794b1dd0f 546 SUPERFAMILY SSF58104 244 525 5.23E-72 T 09-03-2017 RG43_RS13500 c2dbe917536d52b5a777bb3794b1dd0f 546 Pfam PF02203 Tar ligand binding domain homologue 11 177 9.2E-36 T 09-03-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 RG43_RS13500 c2dbe917536d52b5a777bb3794b1dd0f 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 15 40 1.3E-59 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RG43_RS13500 c2dbe917536d52b5a777bb3794b1dd0f 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 298 327 1.3E-59 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RG43_RS13500 c2dbe917536d52b5a777bb3794b1dd0f 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 452 481 1.3E-59 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RG43_RS13500 c2dbe917536d52b5a777bb3794b1dd0f 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 70 85 1.3E-59 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RG43_RS13500 c2dbe917536d52b5a777bb3794b1dd0f 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 402 1.3E-59 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RG43_RS13500 c2dbe917536d52b5a777bb3794b1dd0f 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 1.3E-59 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RG43_RS13500 c2dbe917536d52b5a777bb3794b1dd0f 546 SMART SM00283 277 524 1.7E-90 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RG43_RS07490 4c230c6514cdc384596566f76e37b4e9 97 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 2 48 7.0E-19 T 09-03-2017 RG43_RS07490 4c230c6514cdc384596566f76e37b4e9 97 Pfam PF00936 BMC domain 3 78 8.2E-28 T 09-03-2017 IPR000249 Microcompartment protein, bacteria RG43_RS07490 4c230c6514cdc384596566f76e37b4e9 97 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 20 39 - T 09-03-2017 IPR020808 Bacterial microcompartments protein, conserved site RG43_RS07490 4c230c6514cdc384596566f76e37b4e9 97 SUPERFAMILY SSF143414 1 89 2.35E-31 T 09-03-2017 RG43_RS07490 4c230c6514cdc384596566f76e37b4e9 97 SMART SM00877 2 78 9.9E-36 T 09-03-2017 IPR000249 Microcompartment protein, bacteria RG43_RS02340 b15c243ec4d4fea2e2a60a522168a1a4 489 Pfam PF01471 Putative peptidoglycan binding domain 408 461 1.8E-8 T 09-03-2017 IPR002477 Peptidoglycan binding-like RG43_RS02340 b15c243ec4d4fea2e2a60a522168a1a4 489 Gene3D G3DSA:3.90.70.10 309 393 1.3E-4 T 09-03-2017 RG43_RS02340 b15c243ec4d4fea2e2a60a522168a1a4 489 Pfam PF13401 AAA domain 20 137 4.9E-8 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS02340 b15c243ec4d4fea2e2a60a522168a1a4 489 Gene3D G3DSA:3.40.50.300 5 137 7.1E-8 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS02340 b15c243ec4d4fea2e2a60a522168a1a4 489 SUPERFAMILY SSF47090 400 470 7.53E-12 T 09-03-2017 IPR002477 Peptidoglycan binding-like RG43_RS02340 b15c243ec4d4fea2e2a60a522168a1a4 489 Gene3D G3DSA:1.10.101.10 399 464 6.9E-8 T 09-03-2017 IPR002477 Peptidoglycan binding-like RG43_RS02340 b15c243ec4d4fea2e2a60a522168a1a4 489 SUPERFAMILY SSF52540 5 224 5.5E-9 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS22675 ad504535d705b40a06e8518f04b85fa7 615 SUPERFAMILY SSF55874 1 201 9.17E-57 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS22675 ad504535d705b40a06e8518f04b85fa7 615 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 214 330 2.5E-35 T 09-03-2017 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 RG43_RS22675 ad504535d705b40a06e8518f04b85fa7 615 SMART SM01340 212 331 1.5E-54 T 09-03-2017 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 RG43_RS22675 ad504535d705b40a06e8518f04b85fa7 615 SUPERFAMILY SSF54211 191 331 4.17E-35 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold RG43_RS22675 ad504535d705b40a06e8518f04b85fa7 615 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 09-03-2017 IPR014762 DNA mismatch repair, conserved site RG43_RS22675 ad504535d705b40a06e8518f04b85fa7 615 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 120 5.1E-12 T 09-03-2017 RG43_RS22675 ad504535d705b40a06e8518f04b85fa7 615 Gene3D G3DSA:3.30.565.10 2 202 5.2E-77 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS22675 ad504535d705b40a06e8518f04b85fa7 615 Pfam PF08676 MutL C terminal dimerisation domain 435 563 1.1E-23 T 09-03-2017 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 RG43_RS22675 ad504535d705b40a06e8518f04b85fa7 615 SMART SM00853 438 573 1.4E-16 T 09-03-2017 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 RG43_RS22675 ad504535d705b40a06e8518f04b85fa7 615 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 612 25.737 T 09-03-2017 IPR020667 DNA mismatch repair protein, MutL GO:0006298 RG43_RS22675 ad504535d705b40a06e8518f04b85fa7 615 Gene3D G3DSA:3.30.230.10 217 329 5.4E-38 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RG43_RS22675 ad504535d705b40a06e8518f04b85fa7 615 SUPERFAMILY SSF118116 434 613 6.02E-43 T 09-03-2017 RG43_RS22675 ad504535d705b40a06e8518f04b85fa7 615 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 311 7.6E-107 T 09-03-2017 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 RG43_RS14040 3318fb339e259d031e54787504504a51 254 Pfam PF01569 PAP2 superfamily 77 232 1.3E-34 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RG43_RS14040 3318fb339e259d031e54787504504a51 254 SMART SM00014 76 227 2.4E-48 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RG43_RS14040 3318fb339e259d031e54787504504a51 254 Gene3D G3DSA:1.20.144.10 32 106 6.7E-29 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RG43_RS14040 3318fb339e259d031e54787504504a51 254 Gene3D G3DSA:1.20.144.10 138 240 6.7E-29 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RG43_RS14040 3318fb339e259d031e54787504504a51 254 SUPERFAMILY SSF48317 150 234 1.31E-32 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RG43_RS14040 3318fb339e259d031e54787504504a51 254 SUPERFAMILY SSF48317 16 118 1.31E-32 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RG43_RS18235 e14192e553cbe7248ac82473a603f583 1047 SUPERFAMILY SSF82866 806 1039 1.83E-44 T 09-03-2017 RG43_RS18235 e14192e553cbe7248ac82473a603f583 1047 Gene3D G3DSA:3.30.2090.10 724 807 2.2E-17 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RG43_RS18235 e14192e553cbe7248ac82473a603f583 1047 Gene3D G3DSA:3.30.2090.10 185 269 8.0E-21 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RG43_RS18235 e14192e553cbe7248ac82473a603f583 1047 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1047 0.0 T 09-03-2017 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 RG43_RS18235 e14192e553cbe7248ac82473a603f583 1047 Gene3D G3DSA:3.30.70.1430 46 141 7.9E-26 T 09-03-2017 RG43_RS18235 e14192e553cbe7248ac82473a603f583 1047 SUPERFAMILY SSF82693 46 126 2.2E-20 T 09-03-2017 RG43_RS18235 e14192e553cbe7248ac82473a603f583 1047 SUPERFAMILY SSF82714 723 808 9.16E-17 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RG43_RS18235 e14192e553cbe7248ac82473a603f583 1047 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 1.1E-21 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS18235 e14192e553cbe7248ac82473a603f583 1047 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 1.1E-21 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS18235 e14192e553cbe7248ac82473a603f583 1047 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.1E-21 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS18235 e14192e553cbe7248ac82473a603f583 1047 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 1.1E-21 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS18235 e14192e553cbe7248ac82473a603f583 1047 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 1.1E-21 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS18235 e14192e553cbe7248ac82473a603f583 1047 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.1E-21 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS18235 e14192e553cbe7248ac82473a603f583 1047 SUPERFAMILY SSF82714 186 269 4.71E-20 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RG43_RS18235 e14192e553cbe7248ac82473a603f583 1047 Gene3D G3DSA:1.10.3850.10 815 1038 2.1E-49 T 09-03-2017 RG43_RS18235 e14192e553cbe7248ac82473a603f583 1047 Gene3D G3DSA:1.10.3850.10 275 507 6.9E-68 T 09-03-2017 RG43_RS18235 e14192e553cbe7248ac82473a603f583 1047 SUPERFAMILY SSF82866 294 506 5.89E-41 T 09-03-2017 RG43_RS18235 e14192e553cbe7248ac82473a603f583 1047 Pfam PF00873 AcrB/AcrD/AcrF family 6 1037 8.6E-239 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS18235 e14192e553cbe7248ac82473a603f583 1047 SUPERFAMILY SSF82693 271 328 1.39E-21 T 09-03-2017 RG43_RS18235 e14192e553cbe7248ac82473a603f583 1047 SUPERFAMILY SSF82693 137 184 1.39E-21 T 09-03-2017 RG43_RS18550 7748376feb3fc34e831af80b4059d9f2 834 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 291 795 9.7E-90 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 RG43_RS18550 7748376feb3fc34e831af80b4059d9f2 834 Gene3D G3DSA:3.40.1110.10 535 645 3.9E-18 T 09-03-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 RG43_RS18550 7748376feb3fc34e831af80b4059d9f2 834 Gene3D G3DSA:3.40.50.1000 494 534 2.9E-55 T 09-03-2017 IPR023214 HAD-like domain RG43_RS18550 7748376feb3fc34e831af80b4059d9f2 834 Gene3D G3DSA:3.40.50.1000 646 786 2.9E-55 T 09-03-2017 IPR023214 HAD-like domain RG43_RS18550 7748376feb3fc34e831af80b4059d9f2 834 ProSitePatterns PS01047 Heavy-metal-associated domain. 9 38 - T 09-03-2017 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 RG43_RS18550 7748376feb3fc34e831af80b4059d9f2 834 ProSitePatterns PS01229 Hypothetical cof family signature 2. 718 740 - T 09-03-2017 RG43_RS18550 7748376feb3fc34e831af80b4059d9f2 834 Pfam PF00702 haloacid dehalogenase-like hydrolase 518 732 1.1E-49 T 09-03-2017 RG43_RS18550 7748376feb3fc34e831af80b4059d9f2 834 Pfam PF00403 Heavy-metal-associated domain 105 159 3.0E-15 T 09-03-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RG43_RS18550 7748376feb3fc34e831af80b4059d9f2 834 Pfam PF00403 Heavy-metal-associated domain 8 62 2.5E-11 T 09-03-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RG43_RS18550 7748376feb3fc34e831af80b4059d9f2 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 521 535 2.3E-26 T 09-03-2017 RG43_RS18550 7748376feb3fc34e831af80b4059d9f2 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 643 654 2.3E-26 T 09-03-2017 RG43_RS18550 7748376feb3fc34e831af80b4059d9f2 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 741 753 2.3E-26 T 09-03-2017 RG43_RS18550 7748376feb3fc34e831af80b4059d9f2 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 369 383 2.3E-26 T 09-03-2017 RG43_RS18550 7748376feb3fc34e831af80b4059d9f2 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 665 675 2.3E-26 T 09-03-2017 RG43_RS18550 7748376feb3fc34e831af80b4059d9f2 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 718 737 2.3E-26 T 09-03-2017 RG43_RS18550 7748376feb3fc34e831af80b4059d9f2 834 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 523 529 - T 09-03-2017 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 RG43_RS18550 7748376feb3fc34e831af80b4059d9f2 834 Gene3D G3DSA:3.30.70.100 101 165 4.9E-24 T 09-03-2017 RG43_RS18550 7748376feb3fc34e831af80b4059d9f2 834 Gene3D G3DSA:3.30.70.100 1 65 3.1E-18 T 09-03-2017 RG43_RS18550 7748376feb3fc34e831af80b4059d9f2 834 SUPERFAMILY SSF55008 2 67 1.83E-13 T 09-03-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RG43_RS18550 7748376feb3fc34e831af80b4059d9f2 834 ProSitePatterns PS01047 Heavy-metal-associated domain. 105 134 - T 09-03-2017 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 RG43_RS18550 7748376feb3fc34e831af80b4059d9f2 834 Pfam PF00122 E1-E2 ATPase 290 511 6.1E-64 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 RG43_RS18550 7748376feb3fc34e831af80b4059d9f2 834 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 718 734 6.5E-9 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 RG43_RS18550 7748376feb3fc34e831af80b4059d9f2 834 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 749 774 6.5E-9 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 RG43_RS18550 7748376feb3fc34e831af80b4059d9f2 834 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 690 706 6.5E-9 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 RG43_RS18550 7748376feb3fc34e831af80b4059d9f2 834 SUPERFAMILY SSF81665 420 515 3.01E-13 T 09-03-2017 RG43_RS18550 7748376feb3fc34e831af80b4059d9f2 834 SUPERFAMILY SSF81665 286 323 3.01E-13 T 09-03-2017 RG43_RS18550 7748376feb3fc34e831af80b4059d9f2 834 SUPERFAMILY SSF81665 767 786 3.01E-13 T 09-03-2017 RG43_RS18550 7748376feb3fc34e831af80b4059d9f2 834 SUPERFAMILY SSF81653 322 419 1.01E-24 T 09-03-2017 RG43_RS18550 7748376feb3fc34e831af80b4059d9f2 834 SUPERFAMILY SSF55008 101 166 3.8E-19 T 09-03-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RG43_RS18550 7748376feb3fc34e831af80b4059d9f2 834 Gene3D G3DSA:2.70.150.10 265 420 1.3E-27 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 RG43_RS18550 7748376feb3fc34e831af80b4059d9f2 834 SUPERFAMILY SSF56784 519 539 9.62E-59 T 09-03-2017 IPR023214 HAD-like domain RG43_RS18550 7748376feb3fc34e831af80b4059d9f2 834 SUPERFAMILY SSF56784 576 824 9.62E-59 T 09-03-2017 IPR023214 HAD-like domain RG43_RS18550 7748376feb3fc34e831af80b4059d9f2 834 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 233 827 2.7E-193 T 09-03-2017 RG43_RS18550 7748376feb3fc34e831af80b4059d9f2 834 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 252 827 1.2E-183 T 09-03-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 RG43_RS13750 6165f7d97056fc7abc6b5439b1bd6a1b 299 Gene3D G3DSA:3.40.190.10 179 263 3.3E-14 T 09-03-2017 RG43_RS13750 6165f7d97056fc7abc6b5439b1bd6a1b 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 1.0E-19 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS13750 6165f7d97056fc7abc6b5439b1bd6a1b 299 SUPERFAMILY SSF53850 92 294 1.32E-36 T 09-03-2017 RG43_RS13750 6165f7d97056fc7abc6b5439b1bd6a1b 299 Gene3D G3DSA:1.10.10.10 6 90 2.3E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS13750 6165f7d97056fc7abc6b5439b1bd6a1b 299 Gene3D G3DSA:3.40.190.10 94 178 2.5E-16 T 09-03-2017 RG43_RS13750 6165f7d97056fc7abc6b5439b1bd6a1b 299 Pfam PF03466 LysR substrate binding domain 90 294 2.8E-37 T 09-03-2017 IPR005119 LysR, substrate-binding RG43_RS13750 6165f7d97056fc7abc6b5439b1bd6a1b 299 SUPERFAMILY SSF46785 6 90 2.27E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS13750 6165f7d97056fc7abc6b5439b1bd6a1b 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.5E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS13750 6165f7d97056fc7abc6b5439b1bd6a1b 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.5E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS13750 6165f7d97056fc7abc6b5439b1bd6a1b 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.5E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS11940 a3d6ea0800767d1573a959b93602ea0c 452 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 440 1.5E-177 T 09-03-2017 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 RG43_RS11940 a3d6ea0800767d1573a959b93602ea0c 452 Pfam PF02378 Phosphotransferase system, EIIC 30 363 1.6E-46 T 09-03-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 RG43_RS11940 a3d6ea0800767d1573a959b93602ea0c 452 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 12 440 1.5E-177 T 09-03-2017 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 RG43_RS11940 a3d6ea0800767d1573a959b93602ea0c 452 PIRSF PIRSF006351 1 448 7.4E-135 T 09-03-2017 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 RG43_RS02540 d10f08a13c3b0d3422c72bf0ffcc295e 180 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 13 49 2.9E-16 T 09-03-2017 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 RG43_RS02540 d10f08a13c3b0d3422c72bf0ffcc295e 180 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 104 142 6.9E-16 T 09-03-2017 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 RG43_RS02540 d10f08a13c3b0d3422c72bf0ffcc295e 180 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 145 167 0.12 T 09-03-2017 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 RG43_RS02540 d10f08a13c3b0d3422c72bf0ffcc295e 180 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 62 98 1.6E-18 T 09-03-2017 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 RG43_RS02540 d10f08a13c3b0d3422c72bf0ffcc295e 180 SUPERFAMILY SSF57783 12 49 2.55E-13 T 09-03-2017 RG43_RS02540 d10f08a13c3b0d3422c72bf0ffcc295e 180 SUPERFAMILY SSF57783 60 99 1.65E-13 T 09-03-2017 RG43_RS02540 d10f08a13c3b0d3422c72bf0ffcc295e 180 Gene3D G3DSA:3.30.65.10 102 136 3.6E-4 T 09-03-2017 RG43_RS02540 d10f08a13c3b0d3422c72bf0ffcc295e 180 Gene3D G3DSA:3.30.65.10 14 49 4.4E-15 T 09-03-2017 RG43_RS02540 d10f08a13c3b0d3422c72bf0ffcc295e 180 Gene3D G3DSA:3.30.65.10 62 96 7.7E-15 T 09-03-2017 RG43_RS09460 c114d814890c9588ce80fe9a723d12d0 415 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 62 390 1.0E-77 T 09-03-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RG43_RS09460 c114d814890c9588ce80fe9a723d12d0 415 Gene3D G3DSA:2.40.50.100 195 229 9.2E-24 T 09-03-2017 RG43_RS09460 c114d814890c9588ce80fe9a723d12d0 415 Gene3D G3DSA:2.40.50.100 86 120 9.2E-24 T 09-03-2017 RG43_RS09460 c114d814890c9588ce80fe9a723d12d0 415 SUPERFAMILY SSF111369 79 313 9.68E-55 T 09-03-2017 RG43_RS09460 c114d814890c9588ce80fe9a723d12d0 415 Pfam PF13533 Biotin-lipoyl like 87 135 1.4E-15 T 09-03-2017 RG43_RS09460 c114d814890c9588ce80fe9a723d12d0 415 Pfam PF13437 HlyD family secretion protein 198 301 1.4E-8 T 09-03-2017 RG43_RS09460 c114d814890c9588ce80fe9a723d12d0 415 Hamap MF_01422 Multidrug resistance protein MdtA [mdtA]. 1 413 54.994 T 09-03-2017 IPR022824 Multidrug resistance protein MdtA RG43_RS05830 65a3e8db4dcda276ac792588619084e8 591 Pfam PF02952 L-fucose isomerase, C-terminal domain 390 554 8.6E-55 T 09-03-2017 IPR015888 L-fucose isomerase, C-terminal GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 RG43_RS05830 65a3e8db4dcda276ac792588619084e8 591 Pfam PF07882 L-fucose isomerase, second N-terminal domain 175 354 4.4E-81 T 09-03-2017 IPR012889 L-fucose isomerase, N-terminal-2 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 RG43_RS05830 65a3e8db4dcda276ac792588619084e8 591 Gene3D G3DSA:3.20.14.10 341 590 1.4E-132 T 09-03-2017 IPR015888 L-fucose isomerase, C-terminal GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 RG43_RS05830 65a3e8db4dcda276ac792588619084e8 591 TIGRFAM TIGR01089 fucI: L-fucose isomerase 5 590 0.0 T 09-03-2017 IPR005763 L-fucose isomerase GO:0005737|GO:0008736|GO:0019317|GO:0030145 KEGG: 00051+5.3.1.25 RG43_RS05830 65a3e8db4dcda276ac792588619084e8 591 Pfam PF07881 L-fucose isomerase, first N-terminal domain 7 174 1.4E-83 T 09-03-2017 IPR012888 L-fucose isomerase, N-terminal-1 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 RG43_RS05830 65a3e8db4dcda276ac792588619084e8 591 Gene3D G3DSA:3.40.275.10 176 340 2.8E-80 T 09-03-2017 IPR012889 L-fucose isomerase, N-terminal-2 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 RG43_RS05830 65a3e8db4dcda276ac792588619084e8 591 Hamap MF_01254 L-fucose isomerase [fucI]. 3 591 72.083 T 09-03-2017 IPR005763 L-fucose isomerase GO:0005737|GO:0008736|GO:0019317|GO:0030145 KEGG: 00051+5.3.1.25 RG43_RS05830 65a3e8db4dcda276ac792588619084e8 591 Gene3D G3DSA:3.40.50.1070 4 175 1.3E-97 T 09-03-2017 IPR012888 L-fucose isomerase, N-terminal-1 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 RG43_RS05830 65a3e8db4dcda276ac792588619084e8 591 SUPERFAMILY SSF53743 2 355 1.7E-155 T 09-03-2017 IPR009015 L-fucose isomerase, N-terminal/central domain GO:0005737|GO:0005996|GO:0016861 RG43_RS05830 65a3e8db4dcda276ac792588619084e8 591 SUPERFAMILY SSF50443 356 590 5.23E-129 T 09-03-2017 IPR004216 L-fucose/L-arabinose isomerase, C-terminal RG43_RS00525 103142c372162775cb3f2bc874806e02 198 SUPERFAMILY SSF48498 84 193 4.45E-7 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RG43_RS00525 103142c372162775cb3f2bc874806e02 198 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 198 40.932 T 09-03-2017 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 RG43_RS00525 103142c372162775cb3f2bc874806e02 198 SUPERFAMILY SSF46689 5 86 4.39E-11 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS00525 103142c372162775cb3f2bc874806e02 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 61 4.8E-9 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RG43_RS00525 103142c372162775cb3f2bc874806e02 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 09-03-2017 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RG43_RS00525 103142c372162775cb3f2bc874806e02 198 Gene3D G3DSA:1.10.357.10 7 190 2.6E-34 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RG43_RS24070 1eca852b102981f0e3aa087aa22d0a70 386 PIRSF PIRSF001434 1 384 3.1E-130 T 09-03-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 RG43_RS24070 1eca852b102981f0e3aa087aa22d0a70 386 SUPERFAMILY SSF53383 5 381 1.0E-118 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS24070 1eca852b102981f0e3aa087aa22d0a70 386 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 3 382 6.5E-212 T 09-03-2017 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48 RG43_RS24070 1eca852b102981f0e3aa087aa22d0a70 386 Gene3D G3DSA:3.40.640.10 5 246 3.6E-88 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS24070 1eca852b102981f0e3aa087aa22d0a70 386 Gene3D G3DSA:3.90.1150.10 250 383 2.9E-47 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RG43_RS24070 1eca852b102981f0e3aa087aa22d0a70 386 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 190 204 - T 09-03-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 RG43_RS24070 1eca852b102981f0e3aa087aa22d0a70 386 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 380 1.6E-141 T 09-03-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 RG43_RS25685 763f7017b7dc4d72eba1fdff27ead134 229 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 68 4.7E-14 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS25685 763f7017b7dc4d72eba1fdff27ead134 229 SMART SM00895 97 220 1.8E-17 T 09-03-2017 IPR011711 GntR, C-terminal RG43_RS25685 763f7017b7dc4d72eba1fdff27ead134 229 Gene3D G3DSA:1.10.10.10 5 70 3.8E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS25685 763f7017b7dc4d72eba1fdff27ead134 229 SUPERFAMILY SSF46785 4 72 3.98E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS25685 763f7017b7dc4d72eba1fdff27ead134 229 Gene3D G3DSA:1.20.120.530 93 227 7.0E-26 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal RG43_RS25685 763f7017b7dc4d72eba1fdff27ead134 229 SUPERFAMILY SSF48008 98 227 8.89E-25 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal RG43_RS25685 763f7017b7dc4d72eba1fdff27ead134 229 Pfam PF07729 FCD domain 99 218 3.4E-25 T 09-03-2017 IPR011711 GntR, C-terminal RG43_RS25685 763f7017b7dc4d72eba1fdff27ead134 229 SMART SM00345 9 68 1.3E-10 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS25685 763f7017b7dc4d72eba1fdff27ead134 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 3.9E-5 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS25685 763f7017b7dc4d72eba1fdff27ead134 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 3.9E-5 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS00070 950bf3a1043701a72038bd6628bf2e3a 173 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 164 1.1E-21 T 09-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS00070 950bf3a1043701a72038bd6628bf2e3a 173 Pfam PF08281 Sigma-70, region 4 112 164 6.1E-15 T 09-03-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS00070 950bf3a1043701a72038bd6628bf2e3a 173 SUPERFAMILY SSF88946 12 78 1.41E-13 T 09-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS00070 950bf3a1043701a72038bd6628bf2e3a 173 SUPERFAMILY SSF88659 88 164 1.2E-14 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS00070 950bf3a1043701a72038bd6628bf2e3a 173 Gene3D G3DSA:1.10.1740.10 12 107 2.6E-12 T 09-03-2017 RG43_RS00070 950bf3a1043701a72038bd6628bf2e3a 173 Pfam PF04542 Sigma-70 region 2 16 81 4.6E-12 T 09-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS00070 950bf3a1043701a72038bd6628bf2e3a 173 Gene3D G3DSA:1.10.10.10 109 164 6.3E-14 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS00070 950bf3a1043701a72038bd6628bf2e3a 173 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 38 68 - T 09-03-2017 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS24390 e11d0e891375b566a4899151d242ebe9 91 ProDom PD029230 GPA 5'REGION GP83 ORF83 GENE GP45 BACTERIOPHAGE SIMILAR ORF4 3 78 4.0E-39 T 09-03-2017 IPR020284 Protein of unknown function CP83 RG43_RS04905 d3e155df63b4b26d95a6a761b36e6453 91 Gene3D G3DSA:1.10.3880.10 1 90 3.9E-44 T 09-03-2017 RG43_RS04905 d3e155df63b4b26d95a6a761b36e6453 91 SUPERFAMILY SSF111148 1 90 1.44E-40 T 09-03-2017 IPR007457 Fe(II) trafficking protein YggX GO:0005506 RG43_RS04905 d3e155df63b4b26d95a6a761b36e6453 91 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 2.0E-39 T 09-03-2017 IPR007457 Fe(II) trafficking protein YggX GO:0005506 RG43_RS04905 d3e155df63b4b26d95a6a761b36e6453 91 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 27.992 T 09-03-2017 IPR007457 Fe(II) trafficking protein YggX GO:0005506 RG43_RS04905 d3e155df63b4b26d95a6a761b36e6453 91 PIRSF PIRSF029827 1 90 1.3E-44 T 09-03-2017 IPR007457 Fe(II) trafficking protein YggX GO:0005506 RG43_RS04905 d3e155df63b4b26d95a6a761b36e6453 91 Pfam PF04362 Bacterial Fe(2+) trafficking 1 87 2.0E-40 T 09-03-2017 IPR007457 Fe(II) trafficking protein YggX GO:0005506 RG43_RS18895 a8cce3fc0f387458b2ce5e93ead3bc2d 620 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 09-03-2017 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 RG43_RS18895 a8cce3fc0f387458b2ce5e93ead3bc2d 620 Gene3D G3DSA:3.40.50.970 335 495 1.9E-34 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS18895 a8cce3fc0f387458b2ce5e93ead3bc2d 620 SUPERFAMILY SSF52518 10 199 3.67E-75 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS18895 a8cce3fc0f387458b2ce5e93ead3bc2d 620 SUPERFAMILY SSF52518 243 381 3.67E-75 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS18895 a8cce3fc0f387458b2ce5e93ead3bc2d 620 Pfam PF02779 Transketolase, pyrimidine binding domain 320 480 5.1E-40 T 09-03-2017 IPR005475 Transketolase-like, pyrimidine-binding domain RG43_RS18895 a8cce3fc0f387458b2ce5e93ead3bc2d 620 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 11 620 0.0 T 09-03-2017 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 RG43_RS18895 a8cce3fc0f387458b2ce5e93ead3bc2d 620 Gene3D G3DSA:3.40.50.970 242 334 3.5E-74 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS18895 a8cce3fc0f387458b2ce5e93ead3bc2d 620 Gene3D G3DSA:3.40.50.970 26 201 3.5E-74 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS18895 a8cce3fc0f387458b2ce5e93ead3bc2d 620 Pfam PF02780 Transketolase, C-terminal domain 495 609 9.5E-27 T 09-03-2017 IPR033248 Transketolase, C-terminal domain RG43_RS18895 a8cce3fc0f387458b2ce5e93ead3bc2d 620 SMART SM00861 319 484 8.7E-69 T 09-03-2017 IPR005475 Transketolase-like, pyrimidine-binding domain RG43_RS18895 a8cce3fc0f387458b2ce5e93ead3bc2d 620 SUPERFAMILY SSF52518 317 504 9.36E-58 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS18895 a8cce3fc0f387458b2ce5e93ead3bc2d 620 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 09-03-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 RG43_RS18895 a8cce3fc0f387458b2ce5e93ead3bc2d 620 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 620 46.639 T 09-03-2017 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 RG43_RS18895 a8cce3fc0f387458b2ce5e93ead3bc2d 620 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 12 282 1.3E-116 T 09-03-2017 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 RG43_RS18895 a8cce3fc0f387458b2ce5e93ead3bc2d 620 Gene3D G3DSA:3.40.50.920 496 619 4.8E-35 T 09-03-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RG43_RS18895 a8cce3fc0f387458b2ce5e93ead3bc2d 620 SUPERFAMILY SSF52922 491 619 6.02E-32 T 09-03-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RG43_RS00840 f66cd9e79f2b7efa7cd7612bfa02c860 498 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 250 1.9E-93 T 09-03-2017 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 RG43_RS00840 f66cd9e79f2b7efa7cd7612bfa02c860 498 Gene3D G3DSA:3.30.420.40 257 489 2.5E-46 T 09-03-2017 RG43_RS00840 f66cd9e79f2b7efa7cd7612bfa02c860 498 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 260 440 7.7E-20 T 09-03-2017 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 RG43_RS00840 f66cd9e79f2b7efa7cd7612bfa02c860 498 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 354 374 - T 09-03-2017 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 RG43_RS00840 f66cd9e79f2b7efa7cd7612bfa02c860 498 SUPERFAMILY SSF53067 4 252 2.78E-62 T 09-03-2017 RG43_RS00840 f66cd9e79f2b7efa7cd7612bfa02c860 498 Gene3D G3DSA:3.30.420.40 1 246 5.4E-60 T 09-03-2017 RG43_RS00840 f66cd9e79f2b7efa7cd7612bfa02c860 498 PIRSF PIRSF000538 2 495 1.4E-99 T 09-03-2017 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 RG43_RS00840 f66cd9e79f2b7efa7cd7612bfa02c860 498 SUPERFAMILY SSF53067 256 488 2.05E-52 T 09-03-2017 RG43_RS07295 5649264db7e4a0f1464d05d3806cacf0 688 Gene3D G3DSA:3.30.870.10 327 501 6.4E-73 T 09-03-2017 RG43_RS07295 5649264db7e4a0f1464d05d3806cacf0 688 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 3.0E-31 T 09-03-2017 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 RG43_RS07295 5649264db7e4a0f1464d05d3806cacf0 688 SUPERFAMILY SSF56024 320 499 1.7E-54 T 09-03-2017 RG43_RS07295 5649264db7e4a0f1464d05d3806cacf0 688 PIRSF PIRSF015589 1 688 5.3E-239 T 09-03-2017 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 RG43_RS07295 5649264db7e4a0f1464d05d3806cacf0 688 SUPERFAMILY SSF143724 107 313 1.43E-59 T 09-03-2017 RG43_RS07295 5649264db7e4a0f1464d05d3806cacf0 688 SUPERFAMILY SSF140356 3 105 8.11E-34 T 09-03-2017 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 RG43_RS07295 5649264db7e4a0f1464d05d3806cacf0 688 SUPERFAMILY SSF56024 503 684 3.14E-68 T 09-03-2017 RG43_RS07295 5649264db7e4a0f1464d05d3806cacf0 688 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 683 36.233 T 09-03-2017 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 RG43_RS07295 5649264db7e4a0f1464d05d3806cacf0 688 Pfam PF13090 Polyphosphate kinase C-terminal domain 333 678 2.8E-142 T 09-03-2017 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 RG43_RS07295 5649264db7e4a0f1464d05d3806cacf0 688 Gene3D G3DSA:3.30.870.10 502 685 8.5E-67 T 09-03-2017 RG43_RS07295 5649264db7e4a0f1464d05d3806cacf0 688 Gene3D G3DSA:3.30.1840.10 106 300 9.2E-52 T 09-03-2017 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 RG43_RS07295 5649264db7e4a0f1464d05d3806cacf0 688 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 679 5.5E-256 T 09-03-2017 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 RG43_RS07295 5649264db7e4a0f1464d05d3806cacf0 688 Pfam PF02503 Polyphosphate kinase middle domain 119 319 1.4E-41 T 09-03-2017 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 RG43_RS00535 2931cc9d77f9b98049ada7f809299e11 406 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 187 371 2.0E-73 T 09-03-2017 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 RG43_RS00535 2931cc9d77f9b98049ada7f809299e11 406 Gene3D G3DSA:3.40.50.10300 184 404 4.4E-88 T 09-03-2017 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 RG43_RS00535 2931cc9d77f9b98049ada7f809299e11 406 Gene3D G3DSA:3.40.50.1950 3 182 1.1E-62 T 09-03-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 RG43_RS00535 2931cc9d77f9b98049ada7f809299e11 406 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 3 397 6.8E-166 T 09-03-2017 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5 RG43_RS00535 2931cc9d77f9b98049ada7f809299e11 406 SUPERFAMILY SSF102645 184 401 7.19E-80 T 09-03-2017 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 RG43_RS00535 2931cc9d77f9b98049ada7f809299e11 406 SUPERFAMILY SSF52507 3 180 4.84E-58 T 09-03-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 RG43_RS00535 2931cc9d77f9b98049ada7f809299e11 406 Pfam PF02441 Flavoprotein 6 133 1.9E-30 T 09-03-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 RG43_RS08270 13e6a70abf2f809bdc72c9943cb78d27 214 Pfam PF14834 Glutathione S-transferase, C-terminal domain 95 211 5.6E-71 T 09-03-2017 RG43_RS08270 13e6a70abf2f809bdc72c9943cb78d27 214 SUPERFAMILY SSF47616 90 207 1.44E-9 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like RG43_RS08270 13e6a70abf2f809bdc72c9943cb78d27 214 Pfam PF02798 Glutathione S-transferase, N-terminal domain 11 80 1.3E-12 T 09-03-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RG43_RS08270 13e6a70abf2f809bdc72c9943cb78d27 214 Gene3D G3DSA:3.40.30.10 11 99 3.7E-19 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS08270 13e6a70abf2f809bdc72c9943cb78d27 214 SUPERFAMILY SSF52833 11 87 1.22E-16 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS08270 13e6a70abf2f809bdc72c9943cb78d27 214 Gene3D G3DSA:1.20.1050.10 100 212 9.3E-46 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like RG43_RS23715 c11af8cb9a5dedf563e02e64908817c1 354 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 09-03-2017 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 RG43_RS23715 c11af8cb9a5dedf563e02e64908817c1 354 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 347 1.0E-142 T 09-03-2017 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 RG43_RS23715 c11af8cb9a5dedf563e02e64908817c1 354 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 347 2.4E-137 T 09-03-2017 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 RG43_RS23715 c11af8cb9a5dedf563e02e64908817c1 354 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 349 50.745 T 09-03-2017 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 RG43_RS23715 c11af8cb9a5dedf563e02e64908817c1 354 SUPERFAMILY SSF51726 1 352 7.98E-123 T 09-03-2017 RG43_RS23715 c11af8cb9a5dedf563e02e64908817c1 354 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 09-03-2017 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 RG43_RS23715 c11af8cb9a5dedf563e02e64908817c1 354 Gene3D G3DSA:3.20.20.210 2 352 2.4E-158 T 09-03-2017 RG43_RS00155 47951eb70bd231a7a0569f6e037f299a 423 Gene3D G3DSA:3.40.190.10 142 271 4.8E-20 T 09-03-2017 RG43_RS00155 47951eb70bd231a7a0569f6e037f299a 423 Pfam PF13343 Bacterial extracellular solute-binding protein 87 311 6.7E-29 T 09-03-2017 RG43_RS00155 47951eb70bd231a7a0569f6e037f299a 423 SUPERFAMILY SSF53850 33 337 2.26E-40 T 09-03-2017 RG43_RS00155 47951eb70bd231a7a0569f6e037f299a 423 Gene3D G3DSA:3.40.190.10 272 311 9.8E-16 T 09-03-2017 RG43_RS00155 47951eb70bd231a7a0569f6e037f299a 423 Gene3D G3DSA:3.40.190.10 27 135 9.8E-16 T 09-03-2017 RG43_RS21580 bc065e0b1cf7ff5683bfa06a591c9fc5 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 4.3E-5 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RG43_RS21580 bc065e0b1cf7ff5683bfa06a591c9fc5 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 4.3E-5 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RG43_RS21580 bc065e0b1cf7ff5683bfa06a591c9fc5 289 SUPERFAMILY SSF55136 122 288 2.04E-57 T 09-03-2017 IPR011256 Regulatory factor, effector binding domain RG43_RS21580 bc065e0b1cf7ff5683bfa06a591c9fc5 289 SUPERFAMILY SSF46689 6 55 1.04E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS21580 bc065e0b1cf7ff5683bfa06a591c9fc5 289 Gene3D G3DSA:3.20.80.10 123 289 7.3E-65 T 09-03-2017 IPR011256 Regulatory factor, effector binding domain RG43_RS21580 bc065e0b1cf7ff5683bfa06a591c9fc5 289 SMART SM00871 126 288 1.6E-13 T 09-03-2017 IPR010499 Bacterial transcription activator, effector binding RG43_RS21580 bc065e0b1cf7ff5683bfa06a591c9fc5 289 SUPERFAMILY SSF46689 57 108 4.44E-11 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS21580 bc065e0b1cf7ff5683bfa06a591c9fc5 289 Gene3D G3DSA:1.10.10.60 3 57 5.7E-20 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS21580 bc065e0b1cf7ff5683bfa06a591c9fc5 289 Pfam PF06445 GyrI-like small molecule binding domain 127 288 8.0E-22 T 09-03-2017 IPR029442 GyrI-like small molecule binding domain RG43_RS21580 bc065e0b1cf7ff5683bfa06a591c9fc5 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 55 100 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RG43_RS21580 bc065e0b1cf7ff5683bfa06a591c9fc5 289 Pfam PF12833 Helix-turn-helix domain 27 105 1.3E-19 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS21580 bc065e0b1cf7ff5683bfa06a591c9fc5 289 SMART SM00342 21 104 3.6E-31 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS21580 bc065e0b1cf7ff5683bfa06a591c9fc5 289 Gene3D G3DSA:1.10.10.60 58 119 1.8E-23 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS21660 3c529bcdd2df1419a607280d7073d02c 407 Pfam PF01676 Metalloenzyme superfamily 2 398 6.6E-47 T 09-03-2017 IPR006124 Metalloenzyme GO:0003824|GO:0046872 RG43_RS21660 3c529bcdd2df1419a607280d7073d02c 407 PIRSF PIRSF001491 1 407 1.5E-165 T 09-03-2017 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 RG43_RS21660 3c529bcdd2df1419a607280d7073d02c 407 Gene3D G3DSA:3.30.70.1250 114 235 2.9E-53 T 09-03-2017 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 RG43_RS21660 3c529bcdd2df1419a607280d7073d02c 407 SUPERFAMILY SSF53649 1 114 1.83E-69 T 09-03-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RG43_RS21660 3c529bcdd2df1419a607280d7073d02c 407 SUPERFAMILY SSF53649 236 406 1.83E-69 T 09-03-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RG43_RS21660 3c529bcdd2df1419a607280d7073d02c 407 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 405 1.5E-210 T 09-03-2017 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 RG43_RS21660 3c529bcdd2df1419a607280d7073d02c 407 SUPERFAMILY SSF143856 117 235 2.62E-50 T 09-03-2017 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 RG43_RS21660 3c529bcdd2df1419a607280d7073d02c 407 Hamap MF_00740 Phosphopentomutase [deoB]. 1 407 56.063 T 09-03-2017 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 RG43_RS21660 3c529bcdd2df1419a607280d7073d02c 407 Gene3D G3DSA:3.40.720.10 240 405 2.1E-72 T 09-03-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RG43_RS21660 3c529bcdd2df1419a607280d7073d02c 407 Gene3D G3DSA:3.40.720.10 1 113 2.1E-72 T 09-03-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RG43_RS26500 ab00e8e8c49277851a759ca0df2364c0 160 Gene3D G3DSA:3.20.80.10 7 159 2.6E-43 T 09-03-2017 IPR011256 Regulatory factor, effector binding domain RG43_RS26500 ab00e8e8c49277851a759ca0df2364c0 160 SUPERFAMILY SSF55136 7 159 6.63E-32 T 09-03-2017 IPR011256 Regulatory factor, effector binding domain RG43_RS26500 ab00e8e8c49277851a759ca0df2364c0 160 Pfam PF06445 GyrI-like small molecule binding domain 7 159 4.4E-31 T 09-03-2017 IPR029442 GyrI-like small molecule binding domain RG43_RS26500 ab00e8e8c49277851a759ca0df2364c0 160 SMART SM00871 6 160 4.0E-31 T 09-03-2017 IPR010499 Bacterial transcription activator, effector binding RG43_RS04125 ab00e8e8c49277851a759ca0df2364c0 160 Gene3D G3DSA:3.20.80.10 7 159 2.6E-43 T 09-03-2017 IPR011256 Regulatory factor, effector binding domain RG43_RS04125 ab00e8e8c49277851a759ca0df2364c0 160 SUPERFAMILY SSF55136 7 159 6.63E-32 T 09-03-2017 IPR011256 Regulatory factor, effector binding domain RG43_RS04125 ab00e8e8c49277851a759ca0df2364c0 160 Pfam PF06445 GyrI-like small molecule binding domain 7 159 4.4E-31 T 09-03-2017 IPR029442 GyrI-like small molecule binding domain RG43_RS04125 ab00e8e8c49277851a759ca0df2364c0 160 SMART SM00871 6 160 4.0E-31 T 09-03-2017 IPR010499 Bacterial transcription activator, effector binding RG43_RS10855 5915fd294adc50bead12c662ce0d2e54 328 Gene3D G3DSA:3.40.50.1100 112 325 2.4E-68 T 09-03-2017 RG43_RS10855 5915fd294adc50bead12c662ce0d2e54 328 PIRSF PIRSF006278 2 328 2.4E-93 T 09-03-2017 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase RG43_RS10855 5915fd294adc50bead12c662ce0d2e54 328 TIGRFAM TIGR01275 ACC_deam_rel: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family 12 328 2.7E-146 T 09-03-2017 IPR005966 D-cysteine desulfhydrase GO:0003824 KEGG: 00270+4.4.1.15 RG43_RS10855 5915fd294adc50bead12c662ce0d2e54 328 Hamap MF_01045 D-cysteine desulfhydrase [dcyD]. 1 328 80.774 T 09-03-2017 IPR023702 D-cysteine desulphhydrase, bacterial GO:0019148 KEGG: 00270+4.4.1.15 RG43_RS10855 5915fd294adc50bead12c662ce0d2e54 328 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 16 316 9.3E-55 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RG43_RS10855 5915fd294adc50bead12c662ce0d2e54 328 SUPERFAMILY SSF53686 7 326 2.23E-86 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RG43_RS01540 af68c2b1df5138529a8ceed72150098b 81 SUPERFAMILY SSF64307 5 80 1.96E-27 T 09-03-2017 IPR001455 TusA-like domain RG43_RS01540 af68c2b1df5138529a8ceed72150098b 81 Pfam PF01206 Sulfurtransferase TusA 10 79 1.5E-25 T 09-03-2017 IPR001455 TusA-like domain RG43_RS01540 af68c2b1df5138529a8ceed72150098b 81 Hamap MF_00413 Sulfurtransferase TusA [tusA]. 3 81 30.083 T 09-03-2017 IPR022931 Sulphurtransferase TusA GO:0016783 RG43_RS01540 af68c2b1df5138529a8ceed72150098b 81 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 09-03-2017 IPR001455 TusA-like domain RG43_RS01540 af68c2b1df5138529a8ceed72150098b 81 Gene3D G3DSA:3.30.110.40 6 80 1.2E-31 T 09-03-2017 IPR001455 TusA-like domain RG43_RS05585 c06528a677a656122c060bccf9a2a440 187 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 1.8E-7 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS05585 c06528a677a656122c060bccf9a2a440 187 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS05585 c06528a677a656122c060bccf9a2a440 187 PIRSF PIRSF004525 1 187 8.5E-66 T 09-03-2017 IPR016419 Prepilin peptidase-dependent protein B, predicted RG43_RS05585 c06528a677a656122c060bccf9a2a440 187 Pfam PF13633 Prokaryotic N-terminal methylation site 5 30 1.8E-9 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS07080 45265b1d220acf5e7a0c02795b2e3f92 453 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 163 433 2.5E-47 T 09-03-2017 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 RG43_RS07080 45265b1d220acf5e7a0c02795b2e3f92 453 SUPERFAMILY SSF55961 160 440 4.95E-63 T 09-03-2017 RG43_RS07080 45265b1d220acf5e7a0c02795b2e3f92 453 Hamap MF_01648 3-phenylpropionate/cinnamic acid dioxygenase subunit alpha [hcaE]. 1 453 102.353 T 09-03-2017 IPR020875 3-phenylpropionate/cinnamic acid dioxygenase, alpha subunit GO:0005506|GO:0008695|GO:0019439|GO:0055114 KEGG: 00360+1.14.12.19|MetaCyc: PWY-6690 RG43_RS07080 45265b1d220acf5e7a0c02795b2e3f92 453 Pfam PF00355 Rieske [2Fe-2S] domain 43 125 5.6E-22 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RG43_RS07080 45265b1d220acf5e7a0c02795b2e3f92 453 Gene3D G3DSA:2.102.10.10 43 145 5.2E-20 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RG43_RS07080 45265b1d220acf5e7a0c02795b2e3f92 453 SUPERFAMILY SSF50022 3 157 3.4E-50 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RG43_RS07080 45265b1d220acf5e7a0c02795b2e3f92 453 Gene3D G3DSA:3.90.380.10 146 440 2.2E-109 T 09-03-2017 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 RG43_RS07080 45265b1d220acf5e7a0c02795b2e3f92 453 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 85 108 - T 09-03-2017 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 RG43_RS07080 45265b1d220acf5e7a0c02795b2e3f92 453 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 184 206 1.2E-60 T 09-03-2017 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 RG43_RS07080 45265b1d220acf5e7a0c02795b2e3f92 453 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 57 72 1.2E-60 T 09-03-2017 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 RG43_RS07080 45265b1d220acf5e7a0c02795b2e3f92 453 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 27 52 1.2E-60 T 09-03-2017 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 RG43_RS07080 45265b1d220acf5e7a0c02795b2e3f92 453 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 99 119 1.2E-60 T 09-03-2017 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 RG43_RS07080 45265b1d220acf5e7a0c02795b2e3f92 453 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 143 169 1.2E-60 T 09-03-2017 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 RG43_RS07080 45265b1d220acf5e7a0c02795b2e3f92 453 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 78 98 1.2E-60 T 09-03-2017 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 RG43_RS21585 0eacfb27c9737623b5f9af63b7d88e62 215 Hamap MF_01040 Probable phosphoglycerate mutase GpmB [gpmB]. 1 215 64.959 T 09-03-2017 IPR023086 Phosphoglycerate mutase, GpmB, probable GO:0004619|GO:0006096 RG43_RS21585 0eacfb27c9737623b5f9af63b7d88e62 215 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 194 3.4E-57 T 09-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 RG43_RS21585 0eacfb27c9737623b5f9af63b7d88e62 215 SMART SM00855 3 157 4.6E-24 T 09-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 RG43_RS21585 0eacfb27c9737623b5f9af63b7d88e62 215 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 09-03-2017 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 RG43_RS21585 0eacfb27c9737623b5f9af63b7d88e62 215 Gene3D G3DSA:3.40.50.1240 2 209 2.8E-61 T 09-03-2017 IPR029033 Histidine phosphatase superfamily RG43_RS21585 0eacfb27c9737623b5f9af63b7d88e62 215 SUPERFAMILY SSF53254 1 208 3.8E-58 T 09-03-2017 IPR029033 Histidine phosphatase superfamily RG43_RS18030 5151a11813cce938435888ddb8383dfb 268 SUPERFAMILY SSF55895 33 262 3.79E-29 T 09-03-2017 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 RG43_RS18030 5151a11813cce938435888ddb8383dfb 268 ProSitePatterns PS00531 Ribonuclease T2 family histidine active site 2. 148 159 - T 09-03-2017 IPR033130 Ribonuclease T2, His active site 2 RG43_RS18030 5151a11813cce938435888ddb8383dfb 268 Gene3D G3DSA:3.90.730.10 33 263 4.4E-33 T 09-03-2017 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 RG43_RS18030 5151a11813cce938435888ddb8383dfb 268 Pfam PF00445 Ribonuclease T2 family 38 237 1.5E-12 T 09-03-2017 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 RG43_RS18030 5151a11813cce938435888ddb8383dfb 268 ProSitePatterns PS00530 Ribonuclease T2 family histidine active site 1. 75 82 - T 09-03-2017 IPR018188 Ribonuclease T2, His active site 1 GO:0003723|GO:0033897 RG43_RS07205 7d9ad7e30bb9a30d39ffeb201479cf1e 424 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 411 1.3E-157 T 09-03-2017 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 RG43_RS07205 7d9ad7e30bb9a30d39ffeb201479cf1e 424 Pfam PF03129 Anticodon binding domain 340 420 4.2E-10 T 09-03-2017 IPR004154 Anticodon-binding RG43_RS07205 7d9ad7e30bb9a30d39ffeb201479cf1e 424 PIRSF PIRSF001549 2 423 3.6E-131 T 09-03-2017 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 RG43_RS07205 7d9ad7e30bb9a30d39ffeb201479cf1e 424 Gene3D G3DSA:3.40.50.800 328 422 1.2E-32 T 09-03-2017 IPR004154 Anticodon-binding RG43_RS07205 7d9ad7e30bb9a30d39ffeb201479cf1e 424 Gene3D G3DSA:3.30.930.10 221 320 2.9E-99 T 09-03-2017 RG43_RS07205 7d9ad7e30bb9a30d39ffeb201479cf1e 424 Gene3D G3DSA:3.30.930.10 4 185 2.9E-99 T 09-03-2017 RG43_RS07205 7d9ad7e30bb9a30d39ffeb201479cf1e 424 SUPERFAMILY SSF52954 329 423 3.11E-25 T 09-03-2017 IPR004154 Anticodon-binding RG43_RS07205 7d9ad7e30bb9a30d39ffeb201479cf1e 424 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 421 33.833 T 09-03-2017 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 RG43_RS07205 7d9ad7e30bb9a30d39ffeb201479cf1e 424 SUPERFAMILY SSF55681 5 318 4.98E-106 T 09-03-2017 RG43_RS07205 7d9ad7e30bb9a30d39ffeb201479cf1e 424 Pfam PF13393 Histidyl-tRNA synthetase 10 312 1.3E-47 T 09-03-2017 RG43_RS02945 261ff6da90a7a3f692be0c00dde3dae7 95 Gene3D G3DSA:3.30.160.100 1 95 3.7E-37 T 09-03-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RG43_RS02945 261ff6da90a7a3f692be0c00dde3dae7 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 1.9E-37 T 09-03-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RG43_RS02945 261ff6da90a7a3f692be0c00dde3dae7 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 93 3.7E-27 T 09-03-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RG43_RS02945 261ff6da90a7a3f692be0c00dde3dae7 95 SUPERFAMILY SSF69754 1 95 8.11E-33 T 09-03-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RG43_RS16670 eb17600dde29ca9290bdba8adce54c62 223 Gene3D G3DSA:1.10.357.10 54 222 1.3E-74 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RG43_RS16670 eb17600dde29ca9290bdba8adce54c62 223 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 2.4E-5 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RG43_RS16670 eb17600dde29ca9290bdba8adce54c62 223 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 2.4E-5 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RG43_RS16670 eb17600dde29ca9290bdba8adce54c62 223 SUPERFAMILY SSF46689 4 82 5.64E-19 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS16670 eb17600dde29ca9290bdba8adce54c62 223 ProSitePatterns PS01081 TetR-type HTH domain signature. 29 58 - T 09-03-2017 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RG43_RS16670 eb17600dde29ca9290bdba8adce54c62 223 Gene3D G3DSA:1.10.10.60 4 53 5.9E-21 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS16670 eb17600dde29ca9290bdba8adce54c62 223 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 62 1.0E-13 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RG43_RS16670 eb17600dde29ca9290bdba8adce54c62 223 SUPERFAMILY SSF48498 90 219 1.78E-36 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RG43_RS16670 eb17600dde29ca9290bdba8adce54c62 223 Pfam PF09209 Domain of unknown function (DUF1956) 96 218 1.1E-37 T 09-03-2017 IPR015292 Transcription regulator YbiH, C-terminal RG43_RS00335 a270dd5254c61488f720fbe70a48c3c6 126 Pfam PF01527 Transposase 15 85 1.9E-12 T 09-03-2017 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RG43_RS00335 a270dd5254c61488f720fbe70a48c3c6 126 SUPERFAMILY SSF46689 14 64 2.69E-8 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS00335 a270dd5254c61488f720fbe70a48c3c6 126 Gene3D G3DSA:1.10.10.60 18 64 1.4E-5 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS15415 1379cad879029bd190160f9b1423a4f2 245 SMART SM00481 4 78 6.3E-21 T 09-03-2017 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 RG43_RS15415 1379cad879029bd190160f9b1423a4f2 245 Pfam PF02811 PHP domain 5 80 1.9E-8 T 09-03-2017 IPR004013 PHP domain GO:0003824 RG43_RS15415 1379cad879029bd190160f9b1423a4f2 245 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 1 243 52.228 T 09-03-2017 IPR023710 Probable phosphatase YcdX GO:0008270 RG43_RS15415 1379cad879029bd190160f9b1423a4f2 245 Gene3D G3DSA:3.20.20.140 1 237 3.3E-64 T 09-03-2017 RG43_RS15415 1379cad879029bd190160f9b1423a4f2 245 SUPERFAMILY SSF89550 3 241 7.59E-64 T 09-03-2017 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 RG43_RS12185 da1ba9f98ed362238e68189991c99626 404 Gene3D G3DSA:1.20.1250.20 11 186 3.4E-20 T 09-03-2017 RG43_RS12185 da1ba9f98ed362238e68189991c99626 404 Pfam PF07690 Major Facilitator Superfamily 13 290 1.3E-19 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS12185 da1ba9f98ed362238e68189991c99626 404 ProSitePatterns PS00216 Sugar transport proteins signature 1. 62 78 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RG43_RS12185 da1ba9f98ed362238e68189991c99626 404 Gene3D G3DSA:1.20.1250.20 211 398 7.2E-15 T 09-03-2017 RG43_RS12185 da1ba9f98ed362238e68189991c99626 404 SUPERFAMILY SSF103473 6 398 3.01E-44 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS16800 3b8ce63fe67e3e45717b1ff85db5a919 149 Gene3D G3DSA:3.30.420.10 3 139 1.5E-26 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS16800 3b8ce63fe67e3e45717b1ff85db5a919 149 Pfam PF00665 Integrase core domain 2 100 3.6E-20 T 09-03-2017 IPR001584 Integrase, catalytic core GO:0015074 RG43_RS16800 3b8ce63fe67e3e45717b1ff85db5a919 149 SUPERFAMILY SSF53098 3 146 3.16E-26 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS21470 6bd18f18743b5794f931d27923d1c4b0 376 SUPERFAMILY SSF49493 256 341 6.02E-21 T 09-03-2017 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 RG43_RS21470 6bd18f18743b5794f931d27923d1c4b0 376 Pfam PF00226 DnaJ domain 5 67 8.3E-29 T 09-03-2017 IPR001623 DnaJ domain RG43_RS21470 6bd18f18743b5794f931d27923d1c4b0 376 Pfam PF00684 DnaJ central domain 144 204 3.8E-16 T 09-03-2017 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 RG43_RS21470 6bd18f18743b5794f931d27923d1c4b0 376 Gene3D G3DSA:2.60.260.20 103 137 3.4E-22 T 09-03-2017 RG43_RS21470 6bd18f18743b5794f931d27923d1c4b0 376 Gene3D G3DSA:2.60.260.20 207 251 3.4E-22 T 09-03-2017 RG43_RS21470 6bd18f18743b5794f931d27923d1c4b0 376 Gene3D G3DSA:2.10.230.10 138 206 5.4E-27 T 09-03-2017 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 RG43_RS21470 6bd18f18743b5794f931d27923d1c4b0 376 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 370 43.067 T 09-03-2017 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 RG43_RS21470 6bd18f18743b5794f931d27923d1c4b0 376 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 347 1.1E-143 T 09-03-2017 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 RG43_RS21470 6bd18f18743b5794f931d27923d1c4b0 376 SUPERFAMILY SSF57938 131 207 3.14E-24 T 09-03-2017 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 RG43_RS21470 6bd18f18743b5794f931d27923d1c4b0 376 SUPERFAMILY SSF46565 1 106 9.29E-37 T 09-03-2017 IPR001623 DnaJ domain RG43_RS21470 6bd18f18743b5794f931d27923d1c4b0 376 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 09-03-2017 IPR018253 DnaJ domain, conserved site RG43_RS21470 6bd18f18743b5794f931d27923d1c4b0 376 Pfam PF01556 DnaJ C terminal domain 118 330 1.2E-45 T 09-03-2017 IPR002939 Chaperone DnaJ, C-terminal RG43_RS21470 6bd18f18743b5794f931d27923d1c4b0 376 SMART SM00271 4 62 1.5E-31 T 09-03-2017 IPR001623 DnaJ domain RG43_RS21470 6bd18f18743b5794f931d27923d1c4b0 376 Gene3D G3DSA:1.10.287.110 1 102 4.1E-38 T 09-03-2017 IPR001623 DnaJ domain RG43_RS21470 6bd18f18743b5794f931d27923d1c4b0 376 Gene3D G3DSA:2.60.260.20 253 330 3.2E-23 T 09-03-2017 RG43_RS21470 6bd18f18743b5794f931d27923d1c4b0 376 SUPERFAMILY SSF49493 210 256 2.49E-20 T 09-03-2017 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 RG43_RS21470 6bd18f18743b5794f931d27923d1c4b0 376 SUPERFAMILY SSF49493 111 166 2.49E-20 T 09-03-2017 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 RG43_RS21470 6bd18f18743b5794f931d27923d1c4b0 376 PRINTS PR00625 DnaJ domain signature 7 25 1.0E-33 T 09-03-2017 IPR001623 DnaJ domain RG43_RS21470 6bd18f18743b5794f931d27923d1c4b0 376 PRINTS PR00625 DnaJ domain signature 42 62 1.0E-33 T 09-03-2017 IPR001623 DnaJ domain RG43_RS21470 6bd18f18743b5794f931d27923d1c4b0 376 PRINTS PR00625 DnaJ domain signature 62 81 1.0E-33 T 09-03-2017 IPR001623 DnaJ domain RG43_RS21470 6bd18f18743b5794f931d27923d1c4b0 376 PRINTS PR00625 DnaJ domain signature 25 40 1.0E-33 T 09-03-2017 IPR001623 DnaJ domain RG43_RS11040 31b064d9770314d40e11bb7acf343e07 654 Gene3D G3DSA:2.30.30.40 597 640 7.9E-25 T 09-03-2017 RG43_RS11040 31b064d9770314d40e11bb7acf343e07 654 Gene3D G3DSA:2.30.30.40 509 530 7.9E-25 T 09-03-2017 RG43_RS11040 31b064d9770314d40e11bb7acf343e07 654 SMART SM00260 501 641 2.9E-46 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 RG43_RS11040 31b064d9770314d40e11bb7acf343e07 654 Gene3D G3DSA:3.30.565.10 326 508 2.4E-32 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS11040 31b064d9770314d40e11bb7acf343e07 654 SMART SM01231 261 324 2.7E-21 T 09-03-2017 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 RG43_RS11040 31b064d9770314d40e11bb7acf343e07 654 Pfam PF01627 Hpt domain 8 106 4.7E-20 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RG43_RS11040 31b064d9770314d40e11bb7acf343e07 654 SUPERFAMILY SSF47226 5 126 2.59E-33 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RG43_RS11040 31b064d9770314d40e11bb7acf343e07 654 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 372 508 8.8E-18 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS11040 31b064d9770314d40e11bb7acf343e07 654 Gene3D G3DSA:2.40.50.180 533 596 3.2E-15 T 09-03-2017 RG43_RS11040 31b064d9770314d40e11bb7acf343e07 654 Pfam PF09078 CheY binding 161 223 2.3E-18 T 09-03-2017 IPR015162 CheY binding RG43_RS11040 31b064d9770314d40e11bb7acf343e07 654 Gene3D G3DSA:3.30.70.400 157 227 1.1E-30 T 09-03-2017 IPR015162 CheY binding RG43_RS11040 31b064d9770314d40e11bb7acf343e07 654 Gene3D G3DSA:1.10.287.560 262 325 3.7E-23 T 09-03-2017 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 RG43_RS11040 31b064d9770314d40e11bb7acf343e07 654 Gene3D G3DSA:1.20.120.160 3 137 1.0E-43 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RG43_RS11040 31b064d9770314d40e11bb7acf343e07 654 SMART SM00073 5 102 3.4E-35 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RG43_RS11040 31b064d9770314d40e11bb7acf343e07 654 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 487 2.1E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS11040 31b064d9770314d40e11bb7acf343e07 654 PRINTS PR00344 Bacterial sensor protein C-terminal signature 493 506 2.1E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS11040 31b064d9770314d40e11bb7acf343e07 654 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 463 2.1E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS11040 31b064d9770314d40e11bb7acf343e07 654 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 428 2.1E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS11040 31b064d9770314d40e11bb7acf343e07 654 SMART SM00387 369 509 3.2E-27 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS11040 31b064d9770314d40e11bb7acf343e07 654 SUPERFAMILY SSF50341 508 640 1.96E-31 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 RG43_RS11040 31b064d9770314d40e11bb7acf343e07 654 SUPERFAMILY SSF55874 327 507 1.83E-35 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS11040 31b064d9770314d40e11bb7acf343e07 654 SUPERFAMILY SSF55052 160 224 1.96E-17 T 09-03-2017 IPR015162 CheY binding RG43_RS11040 31b064d9770314d40e11bb7acf343e07 654 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 262 324 1.2E-17 T 09-03-2017 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 RG43_RS11040 31b064d9770314d40e11bb7acf343e07 654 SUPERFAMILY SSF47384 262 325 4.71E-15 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS11040 31b064d9770314d40e11bb7acf343e07 654 Pfam PF01584 CheW-like domain 514 640 4.0E-27 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 RG43_RS14755 d746e60c42fab47a54fc04c381300ede 111 Pfam PF16456 YmgD protein 28 109 1.7E-48 T 09-03-2017 IPR032497 Uncharacterised protein YmgD RG43_RS20730 f820d44147862f2bcd9e5cf6b9f34043 114 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 10 113 5.5E-39 T 09-03-2017 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 RG43_RS20730 f820d44147862f2bcd9e5cf6b9f34043 114 Pfam PF01521 Iron-sulphur cluster biosynthesis 9 109 1.9E-20 T 09-03-2017 IPR000361 FeS cluster biogenesis RG43_RS20730 f820d44147862f2bcd9e5cf6b9f34043 114 Gene3D G3DSA:2.60.300.12 9 104 9.0E-32 T 09-03-2017 IPR000361 FeS cluster biogenesis RG43_RS20730 f820d44147862f2bcd9e5cf6b9f34043 114 SUPERFAMILY SSF89360 8 103 3.34E-31 T 09-03-2017 IPR000361 FeS cluster biogenesis RG43_RS20730 f820d44147862f2bcd9e5cf6b9f34043 114 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 114 37.123 T 09-03-2017 IPR023063 FeS cluster insertion protein ErpA GO:0016226 RG43_RS20730 f820d44147862f2bcd9e5cf6b9f34043 114 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 95 112 - T 09-03-2017 IPR017870 FeS cluster insertion, C-terminal, conserved site RG43_RS12175 7aefe9d44cfe2be509938a25c6cc7fee 288 Gene3D G3DSA:3.40.50.720 112 284 3.9E-46 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS12175 7aefe9d44cfe2be509938a25c6cc7fee 288 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 12 94 1.0E-26 T 09-03-2017 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 RG43_RS12175 7aefe9d44cfe2be509938a25c6cc7fee 288 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 7 286 30.42 T 09-03-2017 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 RG43_RS12175 7aefe9d44cfe2be509938a25c6cc7fee 288 Hamap MF_01578 Quinate/shikimate dehydrogenase [ydiB]. 1 288 82.441 T 09-03-2017 IPR022872 Quinate/Shikimate dehydrogenase GO:0004764|GO:0030266|GO:0052733|GO:0052734|GO:0055114 KEGG: 00400+1.1.1.282|KEGG: 00620+1.1.1.28|MetaCyc: PWY-6163|MetaCyc: PWY-6454|MetaCyc: PWY-6901 RG43_RS12175 7aefe9d44cfe2be509938a25c6cc7fee 288 SUPERFAMILY SSF51735 107 283 1.34E-38 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS12175 7aefe9d44cfe2be509938a25c6cc7fee 288 Gene3D G3DSA:3.40.192.10 3 111 3.4E-37 T 09-03-2017 RG43_RS12175 7aefe9d44cfe2be509938a25c6cc7fee 288 SUPERFAMILY SSF53223 4 106 5.64E-30 T 09-03-2017 RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 SUPERFAMILY SSF52777 2098 2343 7.67E-44 T 09-03-2017 RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 189 205 - T 09-03-2017 IPR018201 Beta-ketoacyl synthase, active site RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 Gene3D G3DSA:3.30.70.250 675 736 7.9E-4 T 09-03-2017 RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 Pfam PF08415 Nonribosomal peptide synthase 2232 2293 1.4E-16 T 09-03-2017 IPR013624 Non-ribosomal peptide synthetase RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 Pfam PF00975 Thioesterase domain 2915 3006 1.4E-20 T 09-03-2017 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 Pfam PF00698 Acyl transferase domain 551 846 2.6E-52 T 09-03-2017 IPR014043 Acyl transferase RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 SUPERFAMILY SSF53335 1060 1250 4.18E-30 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 SMART SM00824 Thioesterase 2918 3152 6.4E-4 T 09-03-2017 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 Pfam PF08242 Methyltransferase domain 2593 2693 1.6E-16 T 09-03-2017 IPR013217 Methyltransferase type 12 RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 Pfam PF08242 Methyltransferase domain 1093 1194 2.6E-21 T 09-03-2017 IPR013217 Methyltransferase type 12 RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 SMART SM00823 Phosphopantetheine attachment site 2830 2898 0.0025 T 09-03-2017 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 SMART SM00823 Phosphopantetheine attachment site 1821 1893 8.8E-4 T 09-03-2017 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 SUPERFAMILY SSF53335 2575 2750 4.8E-23 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 Gene3D G3DSA:3.40.47.10 29 288 1.6E-71 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2853 2868 - T 09-03-2017 IPR006162 Phosphopantetheine attachment site RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 Gene3D G3DSA:3.40.366.10 737 846 1.5E-63 T 09-03-2017 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 Gene3D G3DSA:3.40.366.10 546 671 1.5E-63 T 09-03-2017 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 Pfam PF00668 Condensation domain 1916 2208 5.9E-41 T 09-03-2017 IPR001242 Condensation domain RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 27 276 3.0E-74 T 09-03-2017 IPR014030 Beta-ketoacyl synthase, N-terminal RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 SMART SM00825 Beta-ketoacyl synthase 29 452 1.8E-182 T 09-03-2017 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 Gene3D G3DSA:3.40.50.150 1909 1940 7.2E-27 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 Gene3D G3DSA:3.40.50.150 2584 2746 7.2E-27 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 SUPERFAMILY SSF51735 1557 1786 2.7E-29 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 SUPERFAMILY SSF53901 427 447 1.12E-78 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 SUPERFAMILY SSF53901 172 397 1.12E-78 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 SUPERFAMILY SSF53901 23 143 1.12E-78 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 SUPERFAMILY SSF55048 675 736 1.44E-6 T 09-03-2017 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 SUPERFAMILY SSF52777 1911 2109 2.0E-23 T 09-03-2017 RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 SUPERFAMILY SSF53474 2898 3152 3.6E-44 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 Gene3D G3DSA:1.10.1200.10 1819 1892 3.0E-8 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 Gene3D G3DSA:3.40.47.10 290 453 1.6E-58 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 SUPERFAMILY SSF52151 550 677 3.14E-60 T 09-03-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 SUPERFAMILY SSF52151 738 835 3.14E-60 T 09-03-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 Gene3D G3DSA:3.40.50.1820 2900 3011 1.7E-34 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 Gene3D G3DSA:3.40.50.1820 3085 3152 1.7E-34 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 SUPERFAMILY SSF47336 2828 2894 1.44E-12 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 Gene3D G3DSA:1.10.1200.10 2828 2899 5.7E-19 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 SUPERFAMILY SSF51735 1365 1540 8.27E-11 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 Gene3D G3DSA:3.40.50.150 1049 1246 2.1E-36 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 404 515 1.4E-13 T 09-03-2017 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 Gene3D G3DSA:3.40.50.720 1557 1745 6.5E-26 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 SUPERFAMILY SSF47336 1817 1928 7.85E-13 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 285 401 1.2E-39 T 09-03-2017 IPR014031 Beta-ketoacyl synthase, C-terminal RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1558 1731 5.1E-26 T 09-03-2017 RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 Pfam PF00550 Phosphopantetheine attachment site 1823 1889 4.0E-8 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 Pfam PF00550 Phosphopantetheine attachment site 2832 2894 3.8E-13 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 553 844 8.9E-79 T 09-03-2017 IPR020801 Polyketide synthase, acyl transferase domain RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 Pfam PF08659 KR domain 1560 1729 4.5E-37 T 09-03-2017 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 RG43_RS10180 aed43f3cd13b69b9f18d82d298fff212 3163 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1848 1863 - T 09-03-2017 IPR006162 Phosphopantetheine attachment site RG43_RS14515 171eb3074f1899731442bc20f9b96116 315 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 1.1E-30 T 09-03-2017 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 RG43_RS14515 171eb3074f1899731442bc20f9b96116 315 Gene3D G3DSA:3.40.50.2020 2 159 9.3E-72 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like RG43_RS14515 171eb3074f1899731442bc20f9b96116 315 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 5.4E-49 T 09-03-2017 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 RG43_RS14515 171eb3074f1899731442bc20f9b96116 315 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 09-03-2017 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 RG43_RS14515 171eb3074f1899731442bc20f9b96116 315 SUPERFAMILY SSF53271 69 306 5.83E-67 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like RG43_RS14515 171eb3074f1899731442bc20f9b96116 315 SMART SM01400 4 121 1.3E-74 T 09-03-2017 RG43_RS14515 171eb3074f1899731442bc20f9b96116 315 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 4 314 49.641 T 09-03-2017 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 RG43_RS14515 171eb3074f1899731442bc20f9b96116 315 Gene3D G3DSA:3.40.50.2020 160 285 2.5E-52 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like RG43_RS14515 171eb3074f1899731442bc20f9b96116 315 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 4.9E-127 T 09-03-2017 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 RG43_RS06900 f2052a8ffb79c503dfeebdf367c8f0a5 242 TIGRFAM TIGR00613 reco: DNA repair protein RecO 5 230 5.3E-38 T 09-03-2017 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 RG43_RS06900 f2052a8ffb79c503dfeebdf367c8f0a5 242 Pfam PF11967 Recombination protein O N terminal 4 76 1.3E-22 T 09-03-2017 IPR022572 DNA replication/recombination mediator RecO, N-terminal RG43_RS06900 f2052a8ffb79c503dfeebdf367c8f0a5 242 SUPERFAMILY SSF57863 86 165 5.23E-8 T 09-03-2017 RG43_RS06900 f2052a8ffb79c503dfeebdf367c8f0a5 242 Gene3D G3DSA:2.40.50.140 6 75 7.4E-10 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS06900 f2052a8ffb79c503dfeebdf367c8f0a5 242 Hamap MF_00201 DNA repair protein RecO [recO]. 1 231 23.292 T 09-03-2017 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 RG43_RS06900 f2052a8ffb79c503dfeebdf367c8f0a5 242 Pfam PF02565 Recombination protein O C terminal 83 226 1.4E-23 T 09-03-2017 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 RG43_RS06900 f2052a8ffb79c503dfeebdf367c8f0a5 242 SUPERFAMILY SSF50249 4 75 3.43E-14 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS12070 59ec5d46b9f3ed5fc9297c10221bdeba 99 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 97 4.6E-55 T 09-03-2017 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 RG43_RS12070 59ec5d46b9f3ed5fc9297c10221bdeba 99 Gene3D G3DSA:4.10.520.10 2 93 3.4E-36 T 09-03-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RG43_RS12070 59ec5d46b9f3ed5fc9297c10221bdeba 99 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 3.1E-17 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 RG43_RS12070 59ec5d46b9f3ed5fc9297c10221bdeba 99 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 3.1E-17 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 RG43_RS12070 59ec5d46b9f3ed5fc9297c10221bdeba 99 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 3.1E-17 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 RG43_RS12070 59ec5d46b9f3ed5fc9297c10221bdeba 99 Pfam PF00216 Bacterial DNA-binding protein 3 91 2.7E-30 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 RG43_RS12070 59ec5d46b9f3ed5fc9297c10221bdeba 99 SUPERFAMILY SSF47729 3 93 1.16E-31 T 09-03-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RG43_RS12070 59ec5d46b9f3ed5fc9297c10221bdeba 99 SMART SM00411 3 92 1.2E-43 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 RG43_RS12070 59ec5d46b9f3ed5fc9297c10221bdeba 99 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 09-03-2017 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 RG43_RS12070 59ec5d46b9f3ed5fc9297c10221bdeba 99 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 31.158 T 09-03-2017 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 RG43_RS22805 759d29731a8ce1498d3bd1c9e7141d6e 342 PIRSF PIRSF004911 1 342 7.2E-123 T 09-03-2017 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase RG43_RS22805 759d29731a8ce1498d3bd1c9e7141d6e 342 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 15 335 5.1E-159 T 09-03-2017 IPR022462 Lysine-2,3-aminomutase-like RG43_RS22805 759d29731a8ce1498d3bd1c9e7141d6e 342 SUPERFAMILY SSF102114 102 324 1.2E-25 T 09-03-2017 RG43_RS22805 759d29731a8ce1498d3bd1c9e7141d6e 342 TIGRFAM TIGR00238 TIGR00238: KamA family protein 3 328 2.7E-155 T 09-03-2017 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase RG43_RS22805 759d29731a8ce1498d3bd1c9e7141d6e 342 Pfam PF13353 4Fe-4S single cluster domain 112 176 1.7E-5 T 09-03-2017 RG43_RS22805 759d29731a8ce1498d3bd1c9e7141d6e 342 Gene3D G3DSA:3.20.20.70 104 315 4.3E-17 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS22805 759d29731a8ce1498d3bd1c9e7141d6e 342 Pfam PF04055 Radical SAM superfamily 118 264 1.3E-8 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 RG43_RS04130 3143f4a5aaa3d5aa0870f7044b03c262 535 Gene3D G3DSA:3.10.105.10 292 503 4.7E-60 T 09-03-2017 RG43_RS04130 3143f4a5aaa3d5aa0870f7044b03c262 535 SUPERFAMILY SSF53850 26 528 3.72E-133 T 09-03-2017 RG43_RS04130 3143f4a5aaa3d5aa0870f7044b03c262 535 PIRSF PIRSF002741 4 535 1.9E-102 T 09-03-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RG43_RS04130 3143f4a5aaa3d5aa0870f7044b03c262 535 Gene3D G3DSA:3.90.76.10 42 217 7.9E-50 T 09-03-2017 RG43_RS04130 3143f4a5aaa3d5aa0870f7044b03c262 535 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 75 450 1.6E-78 T 09-03-2017 IPR000914 Solute-binding protein family 5 domain RG43_RS26505 3143f4a5aaa3d5aa0870f7044b03c262 535 Gene3D G3DSA:3.10.105.10 292 503 4.7E-60 T 09-03-2017 RG43_RS26505 3143f4a5aaa3d5aa0870f7044b03c262 535 SUPERFAMILY SSF53850 26 528 3.72E-133 T 09-03-2017 RG43_RS26505 3143f4a5aaa3d5aa0870f7044b03c262 535 PIRSF PIRSF002741 4 535 1.9E-102 T 09-03-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RG43_RS26505 3143f4a5aaa3d5aa0870f7044b03c262 535 Gene3D G3DSA:3.90.76.10 42 217 7.9E-50 T 09-03-2017 RG43_RS26505 3143f4a5aaa3d5aa0870f7044b03c262 535 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 75 450 1.6E-78 T 09-03-2017 IPR000914 Solute-binding protein family 5 domain RG43_RS20575 ecad122ea2e955a8f798d20bffccbf20 319 SUPERFAMILY SSF52096 5 318 3.45E-103 T 09-03-2017 IPR029045 ClpP/crotonase-like domain RG43_RS20575 ecad122ea2e955a8f798d20bffccbf20 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 5.9E-50 T 09-03-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 RG43_RS20575 ecad122ea2e955a8f798d20bffccbf20 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 5.9E-50 T 09-03-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 RG43_RS20575 ecad122ea2e955a8f798d20bffccbf20 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 5.9E-50 T 09-03-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 RG43_RS20575 ecad122ea2e955a8f798d20bffccbf20 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 5.9E-50 T 09-03-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 RG43_RS20575 ecad122ea2e955a8f798d20bffccbf20 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 5.9E-50 T 09-03-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 RG43_RS20575 ecad122ea2e955a8f798d20bffccbf20 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 5.9E-50 T 09-03-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 RG43_RS20575 ecad122ea2e955a8f798d20bffccbf20 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 50.552 T 09-03-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 RG43_RS20575 ecad122ea2e955a8f798d20bffccbf20 319 Gene3D G3DSA:3.90.226.10 59 278 4.9E-49 T 09-03-2017 IPR029045 ClpP/crotonase-like domain RG43_RS20575 ecad122ea2e955a8f798d20bffccbf20 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 151 2.4E-62 T 09-03-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 RG43_RS20575 ecad122ea2e955a8f798d20bffccbf20 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 1.8E-173 T 09-03-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 RG43_RS21650 6ade52fe42684b37c3690713aaeecc5d 87 SUPERFAMILY SSF47413 21 79 2.34E-8 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS21650 6ade52fe42684b37c3690713aaeecc5d 87 Pfam PF04545 Sigma-70, region 4 4 53 1.2E-5 T 09-03-2017 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS21650 6ade52fe42684b37c3690713aaeecc5d 87 SMART SM00530 22 76 4.4E-5 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RG43_RS21650 6ade52fe42684b37c3690713aaeecc5d 87 Gene3D G3DSA:1.10.260.40 24 79 3.8E-8 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS07820 fe3b43534d9c304ca06cf6ecccea69b1 345 SUPERFAMILY SSF101821 67 166 8.24E-20 T 09-03-2017 RG43_RS07820 fe3b43534d9c304ca06cf6ecccea69b1 345 PIRSF PIRSF001123 1 344 2.0E-119 T 09-03-2017 IPR008007 Peptidase M42 RG43_RS07820 fe3b43534d9c304ca06cf6ecccea69b1 345 Gene3D G3DSA:2.40.30.40 71 148 1.4E-26 T 09-03-2017 IPR023367 Peptidase M42, domain 2 RG43_RS07820 fe3b43534d9c304ca06cf6ecccea69b1 345 SUPERFAMILY SSF53187 3 77 7.29E-63 T 09-03-2017 RG43_RS07820 fe3b43534d9c304ca06cf6ecccea69b1 345 SUPERFAMILY SSF53187 158 340 7.29E-63 T 09-03-2017 RG43_RS07820 fe3b43534d9c304ca06cf6ecccea69b1 345 Gene3D G3DSA:3.40.630.10 3 70 1.7E-79 T 09-03-2017 RG43_RS07820 fe3b43534d9c304ca06cf6ecccea69b1 345 Gene3D G3DSA:3.40.630.10 157 343 1.7E-79 T 09-03-2017 RG43_RS07820 fe3b43534d9c304ca06cf6ecccea69b1 345 Pfam PF05343 M42 glutamyl aminopeptidase 43 325 1.0E-84 T 09-03-2017 IPR008007 Peptidase M42 RG43_RS10235 0aa26fdd1e6df57e004b10868f7e44fe 341 SUPERFAMILY SSF56349 61 319 6.47E-55 T 09-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RG43_RS10235 0aa26fdd1e6df57e004b10868f7e44fe 341 Gene3D G3DSA:1.10.150.130 61 160 2.2E-14 T 09-03-2017 IPR023109 Integrase/recombinase, N-terminal RG43_RS10235 0aa26fdd1e6df57e004b10868f7e44fe 341 Pfam PF00589 Phage integrase family 168 288 8.3E-9 T 09-03-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RG43_RS10235 0aa26fdd1e6df57e004b10868f7e44fe 341 Gene3D G3DSA:1.10.443.10 164 319 7.0E-29 T 09-03-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RG43_RS10235 0aa26fdd1e6df57e004b10868f7e44fe 341 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 67 145 2.1E-7 T 09-03-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RG43_RS09420 017d80e7240d5b8fb986f3be01ad74d9 83 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 4 74 1.4E-25 T 09-03-2017 IPR022789 Antitoxin ParD RG43_RS09420 017d80e7240d5b8fb986f3be01ad74d9 83 SUPERFAMILY SSF47598 4 44 1.33E-9 T 09-03-2017 IPR010985 Ribbon-helix-helix GO:0006355 RG43_RS09420 017d80e7240d5b8fb986f3be01ad74d9 83 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 1 77 3.3E-20 T 09-03-2017 IPR022789 Antitoxin ParD RG43_RS11205 ab2c8d0e15e121d76f991aea7301fa1a 188 Pfam PF00857 Isochorismatase family 9 182 2.0E-38 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RG43_RS11205 ab2c8d0e15e121d76f991aea7301fa1a 188 Gene3D G3DSA:3.40.50.850 3 185 4.3E-52 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RG43_RS11205 ab2c8d0e15e121d76f991aea7301fa1a 188 SUPERFAMILY SSF52499 4 188 3.92E-51 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RG43_RS25110 b6e00e81e4dc48a3bb6da3b3f57a016f 313 Gene3D G3DSA:3.40.190.10 3 110 2.7E-48 T 09-03-2017 RG43_RS25110 b6e00e81e4dc48a3bb6da3b3f57a016f 313 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 231 247 - T 09-03-2017 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RG43_RS25110 b6e00e81e4dc48a3bb6da3b3f57a016f 313 SUPERFAMILY SSF53850 5 219 6.29E-86 T 09-03-2017 RG43_RS25110 b6e00e81e4dc48a3bb6da3b3f57a016f 313 PRINTS PR00151 Porphobilinogen deaminase signature 45 65 1.3E-49 T 09-03-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RG43_RS25110 b6e00e81e4dc48a3bb6da3b3f57a016f 313 PRINTS PR00151 Porphobilinogen deaminase signature 230 247 1.3E-49 T 09-03-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RG43_RS25110 b6e00e81e4dc48a3bb6da3b3f57a016f 313 PRINTS PR00151 Porphobilinogen deaminase signature 76 95 1.3E-49 T 09-03-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RG43_RS25110 b6e00e81e4dc48a3bb6da3b3f57a016f 313 PRINTS PR00151 Porphobilinogen deaminase signature 143 160 1.3E-49 T 09-03-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RG43_RS25110 b6e00e81e4dc48a3bb6da3b3f57a016f 313 PRINTS PR00151 Porphobilinogen deaminase signature 124 141 1.3E-49 T 09-03-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RG43_RS25110 b6e00e81e4dc48a3bb6da3b3f57a016f 313 Gene3D G3DSA:3.30.160.40 221 306 2.1E-29 T 09-03-2017 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RG43_RS25110 b6e00e81e4dc48a3bb6da3b3f57a016f 313 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 296 8.1E-25 T 09-03-2017 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RG43_RS25110 b6e00e81e4dc48a3bb6da3b3f57a016f 313 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 5 297 40.188 T 09-03-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RG43_RS25110 b6e00e81e4dc48a3bb6da3b3f57a016f 313 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 6 213 1.9E-78 T 09-03-2017 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RG43_RS25110 b6e00e81e4dc48a3bb6da3b3f57a016f 313 PIRSF PIRSF001438 1 311 1.6E-122 T 09-03-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RG43_RS25110 b6e00e81e4dc48a3bb6da3b3f57a016f 313 Gene3D G3DSA:3.40.190.10 111 199 5.9E-40 T 09-03-2017 RG43_RS25110 b6e00e81e4dc48a3bb6da3b3f57a016f 313 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 6 297 1.1E-112 T 09-03-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RG43_RS25110 b6e00e81e4dc48a3bb6da3b3f57a016f 313 SUPERFAMILY SSF54782 220 308 4.32E-29 T 09-03-2017 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RG43_RS00560 8e1971e3a4b5e90c16262507a38f99e8 159 Gene3D G3DSA:3.40.50.620 1 157 1.6E-57 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS00560 8e1971e3a4b5e90c16262507a38f99e8 159 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 62 1.7E-18 T 09-03-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RG43_RS00560 8e1971e3a4b5e90c16262507a38f99e8 159 SUPERFAMILY SSF52374 3 156 4.29E-47 T 09-03-2017 RG43_RS00560 8e1971e3a4b5e90c16262507a38f99e8 159 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 37.122 T 09-03-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 RG43_RS00560 8e1971e3a4b5e90c16262507a38f99e8 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 8.4E-53 T 09-03-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 RG43_RS00560 8e1971e3a4b5e90c16262507a38f99e8 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 8.4E-53 T 09-03-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 RG43_RS00560 8e1971e3a4b5e90c16262507a38f99e8 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 8.4E-53 T 09-03-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 RG43_RS00560 8e1971e3a4b5e90c16262507a38f99e8 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 8.4E-53 T 09-03-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 RG43_RS00560 8e1971e3a4b5e90c16262507a38f99e8 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 8.4E-53 T 09-03-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 RG43_RS00560 8e1971e3a4b5e90c16262507a38f99e8 159 Pfam PF01467 Cytidylyltransferase-like 6 134 4.9E-23 T 09-03-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RG43_RS00560 8e1971e3a4b5e90c16262507a38f99e8 159 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 157 3.8E-62 T 09-03-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 RG43_RS00560 8e1971e3a4b5e90c16262507a38f99e8 159 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 12 78 0.001 T 09-03-2017 RG43_RS06685 cb1d874ddab3b19e8e3c4515735d6885 408 SMART SM00267 238 408 2.0E-57 T 09-03-2017 IPR000160 GGDEF domain RG43_RS06685 cb1d874ddab3b19e8e3c4515735d6885 408 Pfam PF17152 Periplasmic sensor domain 45 145 4.6E-30 T 09-03-2017 IPR033417 Periplasmic sensor domain CHASE8 RG43_RS06685 cb1d874ddab3b19e8e3c4515735d6885 408 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 247 405 2.6E-34 T 09-03-2017 IPR000160 GGDEF domain RG43_RS06685 cb1d874ddab3b19e8e3c4515735d6885 408 Gene3D G3DSA:3.30.70.270 251 405 1.4E-41 T 09-03-2017 RG43_RS06685 cb1d874ddab3b19e8e3c4515735d6885 408 SUPERFAMILY SSF55073 254 402 5.89E-35 T 09-03-2017 IPR029787 Nucleotide cyclase RG43_RS06685 cb1d874ddab3b19e8e3c4515735d6885 408 Pfam PF00990 Diguanylate cyclase, GGDEF domain 249 403 1.4E-44 T 09-03-2017 IPR000160 GGDEF domain RG43_RS01935 baf9c25bccc1f8cfe1d58ae27f57531b 98 Gene3D G3DSA:1.10.260.40 38 89 1.1E-14 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS01935 baf9c25bccc1f8cfe1d58ae27f57531b 98 SUPERFAMILY SSF47413 39 83 4.1E-8 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS01935 baf9c25bccc1f8cfe1d58ae27f57531b 98 Pfam PF13560 Helix-turn-helix domain 40 77 4.7E-7 T 09-03-2017 RG43_RS01680 366941b124ddcacd0bc5b51dd6ec9f88 162 Gene3D G3DSA:3.40.630.30 2 160 1.8E-37 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS01680 366941b124ddcacd0bc5b51dd6ec9f88 162 SUPERFAMILY SSF55729 4 161 5.4E-36 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS01680 366941b124ddcacd0bc5b51dd6ec9f88 162 Pfam PF00583 Acetyltransferase (GNAT) family 58 137 8.5E-14 T 09-03-2017 IPR000182 GNAT domain GO:0008080 RG43_RS16430 22be67e6895e23202ab193c299fc1509 371 Pfam PF07995 Glucose / Sorbosone dehydrogenase 34 366 4.5E-130 T 09-03-2017 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 RG43_RS16430 22be67e6895e23202ab193c299fc1509 371 SUPERFAMILY SSF50952 20 370 1.83E-41 T 09-03-2017 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 RG43_RS16430 22be67e6895e23202ab193c299fc1509 371 Gene3D G3DSA:2.120.10.30 11 369 2.7E-104 T 09-03-2017 IPR011042 Six-bladed beta-propeller, TolB-like RG43_RS01710 1561e1edb8a9c882db5471ef8683cbf8 446 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 4 444 1.2E-178 T 09-03-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 RG43_RS01710 1561e1edb8a9c882db5471ef8683cbf8 446 PIRSF PIRSF002746 1 446 6.2E-154 T 09-03-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 RG43_RS01710 1561e1edb8a9c882db5471ef8683cbf8 446 Pfam PF02447 GntP family permease 5 441 2.1E-167 T 09-03-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 RG43_RS05300 bdb84d882dd9a33c97d64ebed39a9242 173 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 09-03-2017 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 RG43_RS05300 bdb84d882dd9a33c97d64ebed39a9242 173 TIGRFAM TIGR01752 flav_long: flavodoxin 3 168 1.8E-69 T 09-03-2017 IPR010086 Flavodoxin, long chain GO:0010181 RG43_RS05300 bdb84d882dd9a33c97d64ebed39a9242 173 PIRSF PIRSF038996 1 172 2.3E-55 T 09-03-2017 IPR010086 Flavodoxin, long chain GO:0010181 RG43_RS05300 bdb84d882dd9a33c97d64ebed39a9242 173 Gene3D G3DSA:3.40.50.360 1 168 5.9E-56 T 09-03-2017 IPR029039 Flavoprotein-like domain RG43_RS05300 bdb84d882dd9a33c97d64ebed39a9242 173 SUPERFAMILY SSF52218 1 168 1.51E-46 T 09-03-2017 IPR029039 Flavoprotein-like domain RG43_RS05300 bdb84d882dd9a33c97d64ebed39a9242 173 Pfam PF00258 Flavodoxin 5 160 4.0E-28 T 09-03-2017 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 RG43_RS02910 194ab80cc2a4c255030c3792403ba6b2 778 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 276 1.5E-13 T 09-03-2017 IPR000014 PAS domain RG43_RS02910 194ab80cc2a4c255030c3792403ba6b2 778 Pfam PF00989 PAS fold 156 266 1.1E-17 T 09-03-2017 IPR013767 PAS fold GO:0006355 RG43_RS02910 194ab80cc2a4c255030c3792403ba6b2 778 Gene3D G3DSA:3.30.450.20 141 267 3.7E-20 T 09-03-2017 RG43_RS02910 194ab80cc2a4c255030c3792403ba6b2 778 SUPERFAMILY SSF55874 336 503 3.41E-43 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS02910 194ab80cc2a4c255030c3792403ba6b2 778 SMART SM00387 394 507 2.0E-36 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS02910 194ab80cc2a4c255030c3792403ba6b2 778 PIRSF PIRSF003182 1 778 0.0 T 09-03-2017 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 RG43_RS02910 194ab80cc2a4c255030c3792403ba6b2 778 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 504 4.2E-30 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS02910 194ab80cc2a4c255030c3792403ba6b2 778 Gene3D G3DSA:1.10.287.970 1 89 3.3E-41 T 09-03-2017 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain RG43_RS02910 194ab80cc2a4c255030c3792403ba6b2 778 SMART SM00073 675 772 3.9E-23 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RG43_RS02910 194ab80cc2a4c255030c3792403ba6b2 778 SUPERFAMILY SSF47384 269 347 3.92E-17 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS02910 194ab80cc2a4c255030c3792403ba6b2 778 Pfam PF01627 Hpt domain 686 760 1.5E-10 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RG43_RS02910 194ab80cc2a4c255030c3792403ba6b2 778 SUPERFAMILY SSF55785 140 267 3.49E-20 T 09-03-2017 IPR000014 PAS domain RG43_RS02910 194ab80cc2a4c255030c3792403ba6b2 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 445 2.0E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS02910 194ab80cc2a4c255030c3792403ba6b2 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 459 2.0E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS02910 194ab80cc2a4c255030c3792403ba6b2 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 485 2.0E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS02910 194ab80cc2a4c255030c3792403ba6b2 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 504 2.0E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS02910 194ab80cc2a4c255030c3792403ba6b2 778 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 346 2.4E-15 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS02910 194ab80cc2a4c255030c3792403ba6b2 778 Gene3D G3DSA:3.40.50.2300 524 648 6.3E-32 T 09-03-2017 RG43_RS02910 194ab80cc2a4c255030c3792403ba6b2 778 SMART SM00388 282 347 5.6E-19 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS02910 194ab80cc2a4c255030c3792403ba6b2 778 Pfam PF00072 Response regulator receiver domain 528 639 5.8E-22 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS02910 194ab80cc2a4c255030c3792403ba6b2 778 SMART SM00448 526 639 7.9E-26 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS02910 194ab80cc2a4c255030c3792403ba6b2 778 Gene3D G3DSA:3.30.565.10 348 506 9.4E-46 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS02910 194ab80cc2a4c255030c3792403ba6b2 778 Gene3D G3DSA:1.10.287.130 274 343 1.2E-16 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS02910 194ab80cc2a4c255030c3792403ba6b2 778 SUPERFAMILY SSF52172 526 647 1.99E-27 T 09-03-2017 IPR011006 CheY-like superfamily RG43_RS02910 194ab80cc2a4c255030c3792403ba6b2 778 Gene3D G3DSA:1.20.120.160 676 776 6.4E-35 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RG43_RS02910 194ab80cc2a4c255030c3792403ba6b2 778 SUPERFAMILY SSF47226 661 773 1.7E-27 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RG43_RS02910 194ab80cc2a4c255030c3792403ba6b2 778 SMART SM00091 155 221 4.3E-7 T 09-03-2017 IPR000014 PAS domain RG43_RS23345 c2ed55efb363d067240c55a118bab105 940 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 925 0.0 T 09-03-2017 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 RG43_RS23345 c2ed55efb363d067240c55a118bab105 940 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS23345 c2ed55efb363d067240c55a118bab105 940 Gene3D G3DSA:1.20.1580.10 251 284 5.6E-54 T 09-03-2017 RG43_RS23345 c2ed55efb363d067240c55a118bab105 940 Gene3D G3DSA:1.20.1580.10 407 477 5.6E-54 T 09-03-2017 RG43_RS23345 c2ed55efb363d067240c55a118bab105 940 Gene3D G3DSA:1.20.1580.10 91 129 5.6E-54 T 09-03-2017 RG43_RS23345 c2ed55efb363d067240c55a118bab105 940 SUPERFAMILY SSF52540 613 911 2.9E-54 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS23345 c2ed55efb363d067240c55a118bab105 940 Gene3D G3DSA:3.30.1490.20 130 153 5.6E-28 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RG43_RS23345 c2ed55efb363d067240c55a118bab105 940 Gene3D G3DSA:3.30.1490.20 200 249 5.6E-28 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RG43_RS23345 c2ed55efb363d067240c55a118bab105 940 Gene3D G3DSA:1.10.8.280 286 406 5.5E-44 T 09-03-2017 RG43_RS23345 c2ed55efb363d067240c55a118bab105 940 SUPERFAMILY SSF52540 433 569 1.57E-43 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS23345 c2ed55efb363d067240c55a118bab105 940 SUPERFAMILY SSF52540 4 204 1.57E-43 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS23345 c2ed55efb363d067240c55a118bab105 940 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS23345 c2ed55efb363d067240c55a118bab105 940 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 940 23.219 T 09-03-2017 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 RG43_RS23345 c2ed55efb363d067240c55a118bab105 940 Pfam PF00005 ABC transporter 806 860 1.1E-5 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS23345 c2ed55efb363d067240c55a118bab105 940 Gene3D G3DSA:1.20.1580.10 694 820 3.0E-54 T 09-03-2017 RG43_RS23345 c2ed55efb363d067240c55a118bab105 940 Gene3D G3DSA:3.40.50.300 821 938 4.8E-58 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS23345 c2ed55efb363d067240c55a118bab105 940 Gene3D G3DSA:3.40.50.300 2 51 1.2E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS23345 c2ed55efb363d067240c55a118bab105 940 Gene3D G3DSA:3.40.50.300 478 599 1.2E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS23345 c2ed55efb363d067240c55a118bab105 940 Gene3D G3DSA:3.40.50.300 603 692 4.8E-58 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS03870 26e5504bd56f44056070309eab3e0513 310 Gene3D G3DSA:1.10.10.10 9 91 1.1E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS03870 26e5504bd56f44056070309eab3e0513 310 Pfam PF03466 LysR substrate binding domain 93 296 5.7E-35 T 09-03-2017 IPR005119 LysR, substrate-binding RG43_RS03870 26e5504bd56f44056070309eab3e0513 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 2.5E-15 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS03870 26e5504bd56f44056070309eab3e0513 310 SUPERFAMILY SSF46785 9 115 1.36E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS03870 26e5504bd56f44056070309eab3e0513 310 Gene3D G3DSA:3.40.190.10 181 265 1.5E-22 T 09-03-2017 RG43_RS03870 26e5504bd56f44056070309eab3e0513 310 Gene3D G3DSA:3.40.190.10 97 180 1.1E-19 T 09-03-2017 RG43_RS03870 26e5504bd56f44056070309eab3e0513 310 SUPERFAMILY SSF53850 94 299 7.24E-39 T 09-03-2017 RG43_RS26245 26e5504bd56f44056070309eab3e0513 310 Gene3D G3DSA:1.10.10.10 9 91 1.1E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS26245 26e5504bd56f44056070309eab3e0513 310 Pfam PF03466 LysR substrate binding domain 93 296 5.7E-35 T 09-03-2017 IPR005119 LysR, substrate-binding RG43_RS26245 26e5504bd56f44056070309eab3e0513 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 2.5E-15 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS26245 26e5504bd56f44056070309eab3e0513 310 SUPERFAMILY SSF46785 9 115 1.36E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS26245 26e5504bd56f44056070309eab3e0513 310 Gene3D G3DSA:3.40.190.10 181 265 1.5E-22 T 09-03-2017 RG43_RS26245 26e5504bd56f44056070309eab3e0513 310 Gene3D G3DSA:3.40.190.10 97 180 1.1E-19 T 09-03-2017 RG43_RS26245 26e5504bd56f44056070309eab3e0513 310 SUPERFAMILY SSF53850 94 299 7.24E-39 T 09-03-2017 RG43_RS10670 3a6a80a0d27c82c3a060b6b1409458de 80 Hamap MF_01549 Protein DsrB [dsrB]. 19 80 29.631 T 09-03-2017 IPR019717 Dextransucrase DSRB RG43_RS10670 3a6a80a0d27c82c3a060b6b1409458de 80 Pfam PF10781 Dextransucrase DSRB 19 78 1.1E-35 T 09-03-2017 IPR019717 Dextransucrase DSRB RG43_RS23930 2ee75d7ae7f74f6632003797ffdfba69 404 Pfam PF13378 Enolase C-terminal domain-like 142 379 1.2E-41 T 09-03-2017 IPR029065 Enolase C-terminal domain-like RG43_RS23930 2ee75d7ae7f74f6632003797ffdfba69 404 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 85 110 - T 09-03-2017 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 RG43_RS23930 2ee75d7ae7f74f6632003797ffdfba69 404 SUPERFAMILY SSF54826 1 112 5.45E-32 T 09-03-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RG43_RS23930 2ee75d7ae7f74f6632003797ffdfba69 404 Gene3D G3DSA:3.30.390.10 1 119 4.2E-50 T 09-03-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RG43_RS23930 2ee75d7ae7f74f6632003797ffdfba69 404 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 14 110 1.6E-33 T 09-03-2017 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain RG43_RS23930 2ee75d7ae7f74f6632003797ffdfba69 404 SUPERFAMILY SSF51604 98 388 2.1E-78 T 09-03-2017 IPR029065 Enolase C-terminal domain-like RG43_RS23930 2ee75d7ae7f74f6632003797ffdfba69 404 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 209 240 - T 09-03-2017 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 RG43_RS23930 2ee75d7ae7f74f6632003797ffdfba69 404 Gene3D G3DSA:3.20.20.120 120 367 1.4E-86 T 09-03-2017 IPR029065 Enolase C-terminal domain-like RG43_RS23930 2ee75d7ae7f74f6632003797ffdfba69 404 SMART SM00922 128 259 1.3E-15 T 09-03-2017 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RG43_RS22575 2fcfad752433be9cb37e185faef55aec 109 Gene3D G3DSA:3.30.1660.10 43 109 3.1E-14 T 09-03-2017 IPR025543 Dodecin-like RG43_RS22575 2fcfad752433be9cb37e185faef55aec 109 Pfam PF07338 Protein of unknown function (DUF1471) 53 108 7.5E-15 T 09-03-2017 IPR010854 Domain of unknown function DUF1471 RG43_RS22575 2fcfad752433be9cb37e185faef55aec 109 SUPERFAMILY SSF159871 11 108 7.59E-19 T 09-03-2017 IPR010854 Domain of unknown function DUF1471 RG43_RS06300 4c055c1da38590f28ac26a4a2ca95a38 474 Pfam PF00232 Glycosyl hydrolase family 1 3 470 8.4E-135 T 09-03-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 RG43_RS06300 4c055c1da38590f28ac26a4a2ca95a38 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 389 400 8.9E-16 T 09-03-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 RG43_RS06300 4c055c1da38590f28ac26a4a2ca95a38 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 368 376 8.9E-16 T 09-03-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 RG43_RS06300 4c055c1da38590f28ac26a4a2ca95a38 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 410 427 8.9E-16 T 09-03-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 RG43_RS06300 4c055c1da38590f28ac26a4a2ca95a38 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 302 316 8.9E-16 T 09-03-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 RG43_RS06300 4c055c1da38590f28ac26a4a2ca95a38 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 435 447 8.9E-16 T 09-03-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 RG43_RS06300 4c055c1da38590f28ac26a4a2ca95a38 474 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 09-03-2017 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site RG43_RS06300 4c055c1da38590f28ac26a4a2ca95a38 474 Gene3D G3DSA:3.20.20.80 3 473 3.9E-153 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RG43_RS06300 4c055c1da38590f28ac26a4a2ca95a38 474 SUPERFAMILY SSF51445 2 471 1.36E-162 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily RG43_RS06300 4c055c1da38590f28ac26a4a2ca95a38 474 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 368 376 - T 09-03-2017 IPR018120 Glycoside hydrolase family 1, active site RG43_RS00150 903795817513eaa72e20ea7ad006a254 454 ProSitePatterns PS00942 glpT family of transporters signature. 150 166 - T 09-03-2017 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-3229133|Reactome: R-HSA-70153 RG43_RS00150 903795817513eaa72e20ea7ad006a254 454 Gene3D G3DSA:1.20.1250.20 23 222 5.7E-44 T 09-03-2017 RG43_RS00150 903795817513eaa72e20ea7ad006a254 454 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 419 5.0E-148 T 09-03-2017 RG43_RS00150 903795817513eaa72e20ea7ad006a254 454 Pfam PF07690 Major Facilitator Superfamily 34 402 1.2E-46 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS00150 903795817513eaa72e20ea7ad006a254 454 PIRSF PIRSF002808 6 452 9.7E-108 T 09-03-2017 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 RG43_RS00150 903795817513eaa72e20ea7ad006a254 454 Gene3D G3DSA:1.20.1250.20 252 437 2.8E-34 T 09-03-2017 RG43_RS00150 903795817513eaa72e20ea7ad006a254 454 SUPERFAMILY SSF103473 15 438 1.15E-75 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS17445 128c1c5f5bc8ca7a807f118061258e3b 243 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 97 114 - T 09-03-2017 IPR018046 Pili assembly chaperone, conserved site RG43_RS17445 128c1c5f5bc8ca7a807f118061258e3b 243 SUPERFAMILY SSF49584 149 233 6.93E-20 T 09-03-2017 IPR016148 Pili assembly chaperone, C-terminal RG43_RS17445 128c1c5f5bc8ca7a807f118061258e3b 243 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 22 142 7.1E-34 T 09-03-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 RG43_RS17445 128c1c5f5bc8ca7a807f118061258e3b 243 Gene3D G3DSA:2.60.40.1070 148 234 1.8E-24 T 09-03-2017 IPR016148 Pili assembly chaperone, C-terminal RG43_RS17445 128c1c5f5bc8ca7a807f118061258e3b 243 Gene3D G3DSA:2.60.40.360 22 142 4.0E-39 T 09-03-2017 IPR008962 PapD-like RG43_RS17445 128c1c5f5bc8ca7a807f118061258e3b 243 SUPERFAMILY SSF49354 22 142 1.81E-34 T 09-03-2017 IPR008962 PapD-like RG43_RS17445 128c1c5f5bc8ca7a807f118061258e3b 243 PRINTS PR00969 Pili chaperone signature 68 89 1.8E-29 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS17445 128c1c5f5bc8ca7a807f118061258e3b 243 PRINTS PR00969 Pili chaperone signature 98 115 1.8E-29 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS17445 128c1c5f5bc8ca7a807f118061258e3b 243 PRINTS PR00969 Pili chaperone signature 22 31 1.8E-29 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS17445 128c1c5f5bc8ca7a807f118061258e3b 243 PRINTS PR00969 Pili chaperone signature 160 175 1.8E-29 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS17445 128c1c5f5bc8ca7a807f118061258e3b 243 PRINTS PR00969 Pili chaperone signature 124 139 1.8E-29 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS17445 128c1c5f5bc8ca7a807f118061258e3b 243 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 166 222 4.5E-12 T 09-03-2017 IPR016148 Pili assembly chaperone, C-terminal RG43_RS22540 fafbd2fd3b195cd952ba25042ba54d8d 216 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 206 1.1E-30 T 09-03-2017 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RG43_RS22540 fafbd2fd3b195cd952ba25042ba54d8d 216 Gene3D G3DSA:3.20.20.70 2 215 1.4E-80 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS22540 fafbd2fd3b195cd952ba25042ba54d8d 216 SMART SM00934 5 207 6.1E-36 T 09-03-2017 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RG43_RS22540 fafbd2fd3b195cd952ba25042ba54d8d 216 SUPERFAMILY SSF51366 2 215 1.89E-40 T 09-03-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RG43_RS22540 fafbd2fd3b195cd952ba25042ba54d8d 216 Hamap MF_01267 3-keto-L-gulonate-6-phosphate decarboxylase UlaD [ulaD]. 1 216 69.95 T 09-03-2017 IPR023942 3-keto-L-gulonate-6-phosphate decarboxylase, UlaD GO:0000287|GO:0019854|GO:0033982 KEGG: 00040+4.1.1.85|KEGG: 00053+4.1.1.85|MetaCyc: PWY-6961 RG43_RS13775 01b386065c3f2d61e5463a7369bbc6c7 168 Pfam PF08534 Redoxin 20 163 3.9E-31 T 09-03-2017 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 RG43_RS13775 01b386065c3f2d61e5463a7369bbc6c7 168 ProSitePatterns PS01265 Tpx family signature. 84 95 - T 09-03-2017 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 RG43_RS13775 01b386065c3f2d61e5463a7369bbc6c7 168 Gene3D G3DSA:3.40.30.10 4 168 8.2E-47 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS13775 01b386065c3f2d61e5463a7369bbc6c7 168 SUPERFAMILY SSF52833 4 164 3.34E-45 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS13775 01b386065c3f2d61e5463a7369bbc6c7 168 Hamap MF_00269 Probable thiol peroxidase [tpx]. 4 167 39.965 T 09-03-2017 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 RG43_RS07190 1b191014a633b5c1771193980a66d6a7 384 Gene3D G3DSA:3.20.20.70 117 322 9.4E-18 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS07190 1b191014a633b5c1771193980a66d6a7 384 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 17 364 75.927 T 09-03-2017 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RG43_RS07190 1b191014a633b5c1771193980a66d6a7 384 PIRSF PIRSF006004 11 378 3.2E-149 T 09-03-2017 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RG43_RS07190 1b191014a633b5c1771193980a66d6a7 384 Pfam PF04055 Radical SAM superfamily 120 289 2.9E-18 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 RG43_RS07190 1b191014a633b5c1771193980a66d6a7 384 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 13 369 2.4E-179 T 09-03-2017 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RG43_RS07190 1b191014a633b5c1771193980a66d6a7 384 SUPERFAMILY SSF102114 116 326 4.84E-16 T 09-03-2017 RG43_RS12975 457b25480cde7f6ed89a7b82762593b0 530 PIRSF PIRSF000538 11 519 5.0E-117 T 09-03-2017 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 RG43_RS12975 457b25480cde7f6ed89a7b82762593b0 530 Gene3D G3DSA:3.30.420.40 263 516 3.6E-39 T 09-03-2017 RG43_RS12975 457b25480cde7f6ed89a7b82762593b0 530 SUPERFAMILY SSF53067 13 263 2.96E-59 T 09-03-2017 RG43_RS12975 457b25480cde7f6ed89a7b82762593b0 530 Gene3D G3DSA:3.30.420.40 11 260 7.8E-59 T 09-03-2017 RG43_RS12975 457b25480cde7f6ed89a7b82762593b0 530 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 298 467 1.1E-18 T 09-03-2017 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 RG43_RS12975 457b25480cde7f6ed89a7b82762593b0 530 SUPERFAMILY SSF53067 262 512 1.78E-47 T 09-03-2017 RG43_RS12975 457b25480cde7f6ed89a7b82762593b0 530 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 13 260 2.2E-50 T 09-03-2017 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 RG43_RS12975 457b25480cde7f6ed89a7b82762593b0 530 Hamap MF_02053 Autoinducer-2 kinase [lsrK]. 15 530 76.08 T 09-03-2017 IPR033676 Autoinducer-2 kinase GO:0009372|GO:0071518 RG43_RS02250 29495e0d2573e3eb61572cc610d4e48b 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 5.2E-60 T 09-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS02250 29495e0d2573e3eb61572cc610d4e48b 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 5.2E-60 T 09-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS02250 29495e0d2573e3eb61572cc610d4e48b 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 5.2E-60 T 09-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS02250 29495e0d2573e3eb61572cc610d4e48b 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 5.2E-60 T 09-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS02250 29495e0d2573e3eb61572cc610d4e48b 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 5.2E-60 T 09-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS02250 29495e0d2573e3eb61572cc610d4e48b 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 5.2E-60 T 09-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS02250 29495e0d2573e3eb61572cc610d4e48b 124 Gene3D G3DSA:2.40.50.140 1 123 5.3E-65 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS02250 29495e0d2573e3eb61572cc610d4e48b 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 2.6E-70 T 09-03-2017 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS02250 29495e0d2573e3eb61572cc610d4e48b 124 Pfam PF00164 Ribosomal protein S12/S23 6 123 1.8E-43 T 09-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS02250 29495e0d2573e3eb61572cc610d4e48b 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.634 T 09-03-2017 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS02250 29495e0d2573e3eb61572cc610d4e48b 124 SUPERFAMILY SSF50249 3 123 1.63E-51 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS02250 29495e0d2573e3eb61572cc610d4e48b 124 PIRSF PIRSF002133 1 124 7.8E-54 T 09-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS02250 29495e0d2573e3eb61572cc610d4e48b 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 09-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS05520 eb24ab40ad07bed2aa38a2d5d37ba0a6 719 Gene3D G3DSA:3.40.50.980 377 532 3.1E-40 T 09-03-2017 RG43_RS05520 eb24ab40ad07bed2aa38a2d5d37ba0a6 719 SMART SM00563 30 140 2.5E-28 T 09-03-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RG43_RS05520 eb24ab40ad07bed2aa38a2d5d37ba0a6 719 ProSitePatterns PS00455 Putative AMP-binding domain signature. 370 381 - T 09-03-2017 IPR020845 AMP-binding, conserved site RG43_RS05520 eb24ab40ad07bed2aa38a2d5d37ba0a6 719 Pfam PF00501 AMP-binding enzyme 233 619 7.7E-66 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RG43_RS05520 eb24ab40ad07bed2aa38a2d5d37ba0a6 719 Gene3D G3DSA:2.30.38.10 533 609 5.4E-14 T 09-03-2017 RG43_RS05520 eb24ab40ad07bed2aa38a2d5d37ba0a6 719 Gene3D G3DSA:3.30.300.30 617 716 1.1E-8 T 09-03-2017 RG43_RS05520 eb24ab40ad07bed2aa38a2d5d37ba0a6 719 Gene3D G3DSA:3.40.50.980 233 376 1.6E-15 T 09-03-2017 RG43_RS05520 eb24ab40ad07bed2aa38a2d5d37ba0a6 719 Hamap MF_01162 Bifunctional protein Aas [aas]. 1 717 49.109 T 09-03-2017 IPR023775 Bifunctional protein Aas GO:0006631|GO:0008654|GO:0008779|GO:0008922 KEGG: 00071+6.2.1.20|KEGG: 00564+2.3.1.40|MetaCyc: PWY-6622|MetaCyc: PWY-7032 RG43_RS05520 eb24ab40ad07bed2aa38a2d5d37ba0a6 719 Pfam PF01553 Acyltransferase 15 137 3.5E-19 T 09-03-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RG43_RS05520 eb24ab40ad07bed2aa38a2d5d37ba0a6 719 SUPERFAMILY SSF69593 3 171 1.31E-21 T 09-03-2017 RG43_RS05520 eb24ab40ad07bed2aa38a2d5d37ba0a6 719 SUPERFAMILY SSF56801 219 712 5.1E-94 T 09-03-2017 RG43_RS21155 febeb6c2343dfdcb5d71c621b1792cce 163 SUPERFAMILY SSF55021 2 74 1.93E-22 T 09-03-2017 RG43_RS21155 febeb6c2343dfdcb5d71c621b1792cce 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 7.0E-37 T 09-03-2017 RG43_RS21155 febeb6c2343dfdcb5d71c621b1792cce 163 Pfam PF10369 Small subunit of acetolactate synthase 84 158 3.1E-23 T 09-03-2017 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 RG43_RS21155 febeb6c2343dfdcb5d71c621b1792cce 163 Gene3D G3DSA:3.30.70.1150 83 162 3.0E-27 T 09-03-2017 RG43_RS21155 febeb6c2343dfdcb5d71c621b1792cce 163 Pfam PF13710 ACT domain 12 73 2.7E-15 T 09-03-2017 RG43_RS21155 febeb6c2343dfdcb5d71c621b1792cce 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 159 7.0E-69 T 09-03-2017 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 RG43_RS21155 febeb6c2343dfdcb5d71c621b1792cce 163 SUPERFAMILY SSF55021 79 162 7.33E-26 T 09-03-2017 RG43_RS21155 febeb6c2343dfdcb5d71c621b1792cce 163 Gene3D G3DSA:3.30.70.260 1 76 8.3E-36 T 09-03-2017 RG43_RS11280 7541dbb95c7721cfec48115bff61389d 289 SUPERFAMILY SSF53697 94 279 3.08E-43 T 09-03-2017 RG43_RS11280 7541dbb95c7721cfec48115bff61389d 289 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 2.2E-32 T 09-03-2017 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 RG43_RS11280 7541dbb95c7721cfec48115bff61389d 289 Pfam PF01380 SIS domain 124 252 2.6E-28 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 RG43_RS11280 7541dbb95c7721cfec48115bff61389d 289 Gene3D G3DSA:1.10.10.10 1 80 1.9E-31 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS11280 7541dbb95c7721cfec48115bff61389d 289 SUPERFAMILY SSF46689 1 80 6.27E-21 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS11280 7541dbb95c7721cfec48115bff61389d 289 Gene3D G3DSA:3.40.50.10490 97 270 1.1E-40 T 09-03-2017 RG43_RS19100 da971fe75f46b0e67d0f7a765e069a77 364 SUPERFAMILY SSF52440 3 139 2.59E-36 T 09-03-2017 IPR016185 Pre-ATP-grasp domain RG43_RS19100 da971fe75f46b0e67d0f7a765e069a77 364 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 107 118 - T 09-03-2017 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RG43_RS19100 da971fe75f46b0e67d0f7a765e069a77 364 Gene3D G3DSA:3.30.1490.20 157 223 9.0E-27 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RG43_RS19100 da971fe75f46b0e67d0f7a765e069a77 364 Gene3D G3DSA:3.40.50.20 1 129 5.4E-36 T 09-03-2017 IPR016185 Pre-ATP-grasp domain RG43_RS19100 da971fe75f46b0e67d0f7a765e069a77 364 PIRSF PIRSF039102 1 359 1.7E-139 T 09-03-2017 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RG43_RS19100 da971fe75f46b0e67d0f7a765e069a77 364 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 350 4.0E-120 T 09-03-2017 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RG43_RS19100 da971fe75f46b0e67d0f7a765e069a77 364 Gene3D G3DSA:3.30.470.20 224 361 1.1E-52 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RG43_RS19100 da971fe75f46b0e67d0f7a765e069a77 364 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 293 321 - T 09-03-2017 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RG43_RS19100 da971fe75f46b0e67d0f7a765e069a77 364 Pfam PF07478 D-ala D-ala ligase C-terminus 147 348 9.8E-83 T 09-03-2017 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RG43_RS19100 da971fe75f46b0e67d0f7a765e069a77 364 SUPERFAMILY SSF56059 140 354 1.01E-60 T 09-03-2017 RG43_RS19100 da971fe75f46b0e67d0f7a765e069a77 364 Pfam PF01820 D-ala D-ala ligase N-terminus 5 130 9.4E-31 T 09-03-2017 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RG43_RS19100 da971fe75f46b0e67d0f7a765e069a77 364 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 351 42.927 T 09-03-2017 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RG43_RS01900 b994f7e159789c2d72f9d9ecfbe6ddb1 75 SMART SM00899 1 72 4.2E-8 T 09-03-2017 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 RG43_RS01900 b994f7e159789c2d72f9d9ecfbe6ddb1 75 Pfam PF04023 FeoA domain 5 71 3.0E-8 T 09-03-2017 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 RG43_RS01900 b994f7e159789c2d72f9d9ecfbe6ddb1 75 SUPERFAMILY SSF50037 2 73 7.33E-17 T 09-03-2017 IPR008988 Transcriptional repressor, C-terminal RG43_RS01855 fc45ab32822cf6d6aa81bfa278b69369 438 Pfam PF02447 GntP family permease 1 437 3.2E-188 T 09-03-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 RG43_RS01855 fc45ab32822cf6d6aa81bfa278b69369 438 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 1 438 7.4E-204 T 09-03-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 RG43_RS01855 fc45ab32822cf6d6aa81bfa278b69369 438 PIRSF PIRSF002746 1 438 5.0E-160 T 09-03-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 RG43_RS15510 a11ab387978eb77e950a7d60b690e5a2 270 TIGRFAM TIGR03611 RutD: pyrimidine utilization protein D 1 257 1.8E-123 T 09-03-2017 IPR019913 Pyrimidine utilisation protein RutD GO:0006212|GO:0016811 RG43_RS15510 a11ab387978eb77e950a7d60b690e5a2 270 SUPERFAMILY SSF53474 9 253 5.1E-51 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS15510 a11ab387978eb77e950a7d60b690e5a2 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 39 54 8.3E-5 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 RG43_RS15510 a11ab387978eb77e950a7d60b690e5a2 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 111 8.3E-5 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 RG43_RS15510 a11ab387978eb77e950a7d60b690e5a2 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 84 97 8.3E-5 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 RG43_RS15510 a11ab387978eb77e950a7d60b690e5a2 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 201 215 8.3E-5 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 RG43_RS15510 a11ab387978eb77e950a7d60b690e5a2 270 Hamap MF_00832 Putative aminoacrylate hydrolase RutD [rutD]. 1 258 50.887 T 09-03-2017 IPR019913 Pyrimidine utilisation protein RutD GO:0006212|GO:0016811 RG43_RS15510 a11ab387978eb77e950a7d60b690e5a2 270 Gene3D G3DSA:3.40.50.1820 11 253 1.5E-48 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS15510 a11ab387978eb77e950a7d60b690e5a2 270 Pfam PF00561 alpha/beta hydrolase fold 14 116 6.6E-17 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 RG43_RS16940 d86bb26c0d149c4f51bd9c86fe7ed2d7 181 SUPERFAMILY SSF46955 2 64 6.71E-15 T 09-03-2017 IPR009061 Putative DNA-binding domain RG43_RS16940 d86bb26c0d149c4f51bd9c86fe7ed2d7 181 Pfam PF07471 Phage DNA packaging protein Nu1 1 164 5.6E-90 T 09-03-2017 IPR010906 Bacteriophage lambda, Nu1, terminase small subunit RG43_RS16940 d86bb26c0d149c4f51bd9c86fe7ed2d7 181 Gene3D G3DSA:1.10.10.10 1 68 5.9E-32 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS18215 652ee11711aac4d3bfcde55fb6dbc621 127 SUPERFAMILY SSF142906 8 120 3.4E-36 T 09-03-2017 RG43_RS18215 652ee11711aac4d3bfcde55fb6dbc621 127 Pfam PF04237 YjbR 15 106 1.3E-20 T 09-03-2017 IPR007351 Uncharacterised protein YjbR RG43_RS01745 b3d0eb51d9af43bb4f1451713c68723b 815 SUPERFAMILY SSF53756 9 814 0.0 T 09-03-2017 RG43_RS01745 b3d0eb51d9af43bb4f1451713c68723b 815 Gene3D G3DSA:3.40.50.2000 480 795 1.7E-142 T 09-03-2017 RG43_RS01745 b3d0eb51d9af43bb4f1451713c68723b 815 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 654 666 - T 09-03-2017 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 RG43_RS01745 b3d0eb51d9af43bb4f1451713c68723b 815 Gene3D G3DSA:3.40.50.2000 11 479 5.8E-209 T 09-03-2017 RG43_RS01745 b3d0eb51d9af43bb4f1451713c68723b 815 Pfam PF00343 Carbohydrate phosphorylase 102 810 0.0 T 09-03-2017 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 RG43_RS01745 b3d0eb51d9af43bb4f1451713c68723b 815 PIRSF PIRSF000460 2 815 1.3E-235 T 09-03-2017 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 RG43_RS01745 b3d0eb51d9af43bb4f1451713c68723b 815 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 14 810 0.0 T 09-03-2017 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 RG43_RS04520 38890fec28d445c3027a2b8d3e7027de 77 ProDom PD028015 PLASMID YKFF YDEA R0111 YPJI YPMT1.60C C4569 AEC70 PSLT067 YFJA 9 74 7.0E-33 T 09-03-2017 IPR009253 Protein of unknown function DUF905 RG43_RS04520 38890fec28d445c3027a2b8d3e7027de 77 Gene3D G3DSA:3.30.160.130 5 77 2.8E-39 T 09-03-2017 RG43_RS04520 38890fec28d445c3027a2b8d3e7027de 77 Pfam PF06006 Bacterial protein of unknown function (DUF905) 8 74 1.1E-29 T 09-03-2017 IPR009253 Protein of unknown function DUF905 RG43_RS04520 38890fec28d445c3027a2b8d3e7027de 77 SUPERFAMILY SSF54786 12 77 2.43E-30 T 09-03-2017 RG43_RS25935 38890fec28d445c3027a2b8d3e7027de 77 ProDom PD028015 PLASMID YKFF YDEA R0111 YPJI YPMT1.60C C4569 AEC70 PSLT067 YFJA 9 74 7.0E-33 T 09-03-2017 IPR009253 Protein of unknown function DUF905 RG43_RS25935 38890fec28d445c3027a2b8d3e7027de 77 Gene3D G3DSA:3.30.160.130 5 77 2.8E-39 T 09-03-2017 RG43_RS25935 38890fec28d445c3027a2b8d3e7027de 77 Pfam PF06006 Bacterial protein of unknown function (DUF905) 8 74 1.1E-29 T 09-03-2017 IPR009253 Protein of unknown function DUF905 RG43_RS25935 38890fec28d445c3027a2b8d3e7027de 77 SUPERFAMILY SSF54786 12 77 2.43E-30 T 09-03-2017 RG43_RS01840 b5dd9811358468bda72ed5931c0a2bf7 901 Hamap MF_01247 HTH-type transcriptional regulator MalT [malT]. 1 899 41.44 T 09-03-2017 IPR023768 Transcriptional regulator HTH-type, MalT RG43_RS01840 b5dd9811358468bda72ed5931c0a2bf7 901 Gene3D G3DSA:1.25.40.10 439 808 1.3E-106 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS01840 b5dd9811358468bda72ed5931c0a2bf7 901 SUPERFAMILY SSF46894 828 892 1.6E-16 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RG43_RS01840 b5dd9811358468bda72ed5931c0a2bf7 901 Gene3D G3DSA:3.40.50.300 31 143 7.3E-5 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS01840 b5dd9811358468bda72ed5931c0a2bf7 901 SUPERFAMILY SSF48452 442 803 8.3E-155 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS01840 b5dd9811358468bda72ed5931c0a2bf7 901 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 836 850 1.2E-10 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS01840 b5dd9811358468bda72ed5931c0a2bf7 901 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 866 878 1.2E-10 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS01840 b5dd9811358468bda72ed5931c0a2bf7 901 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 850 866 1.2E-10 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS01840 b5dd9811358468bda72ed5931c0a2bf7 901 Pfam PF00196 Bacterial regulatory proteins, luxR family 835 890 1.9E-19 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS01840 b5dd9811358468bda72ed5931c0a2bf7 901 SUPERFAMILY SSF52540 6 232 9.69E-7 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS01840 b5dd9811358468bda72ed5931c0a2bf7 901 SMART SM00421 833 890 3.1E-20 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS01840 b5dd9811358468bda72ed5931c0a2bf7 901 ProSitePatterns PS00622 LuxR-type HTH domain signature. 850 877 - T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS01840 b5dd9811358468bda72ed5931c0a2bf7 901 Gene3D G3DSA:1.10.10.10 835 892 5.7E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS13640 7451d958824a1e58e354194464bf3167 1174 Pfam PF10371 Domain of unknown function 626 678 6.0E-23 T 09-03-2017 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 RG43_RS13640 7451d958824a1e58e354194464bf3167 1174 Gene3D G3DSA:3.40.50.970 1 254 3.6E-111 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS13640 7451d958824a1e58e354194464bf3167 1174 SUPERFAMILY SSF54862 665 838 6.7E-23 T 09-03-2017 RG43_RS13640 7451d958824a1e58e354194464bf3167 1174 Gene3D G3DSA:4.10.780.10 628 668 7.9E-21 T 09-03-2017 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 RG43_RS13640 7451d958824a1e58e354194464bf3167 1174 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 265 347 7.8E-16 T 09-03-2017 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II RG43_RS13640 7451d958824a1e58e354194464bf3167 1174 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 745 756 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS13640 7451d958824a1e58e354194464bf3167 1174 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 689 700 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS13640 7451d958824a1e58e354194464bf3167 1174 PIRSF PIRSF000159 1 1174 0.0 T 09-03-2017 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 RG43_RS13640 7451d958824a1e58e354194464bf3167 1174 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 1 1165 0.0 T 09-03-2017 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 RG43_RS13640 7451d958824a1e58e354194464bf3167 1174 SMART SM00890 622 679 4.1E-29 T 09-03-2017 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 RG43_RS13640 7451d958824a1e58e354194464bf3167 1174 Gene3D G3DSA:3.30.70.20 672 783 6.6E-21 T 09-03-2017 RG43_RS13640 7451d958824a1e58e354194464bf3167 1174 SUPERFAMILY SSF53323 419 668 1.44E-76 T 09-03-2017 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 RG43_RS13640 7451d958824a1e58e354194464bf3167 1174 Gene3D G3DSA:3.40.920.10 418 619 1.3E-78 T 09-03-2017 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 RG43_RS13640 7451d958824a1e58e354194464bf3167 1174 Pfam PF13484 4Fe-4S double cluster binding domain 689 757 1.1E-9 T 09-03-2017 RG43_RS13640 7451d958824a1e58e354194464bf3167 1174 Gene3D G3DSA:3.40.50.970 796 1166 1.4E-127 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS13640 7451d958824a1e58e354194464bf3167 1174 SUPERFAMILY SSF52518 794 1166 6.42E-118 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS13640 7451d958824a1e58e354194464bf3167 1174 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 426 610 3.7E-34 T 09-03-2017 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 RG43_RS13640 7451d958824a1e58e354194464bf3167 1174 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 954 1066 2.5E-8 T 09-03-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RG43_RS13640 7451d958824a1e58e354194464bf3167 1174 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 13 243 1.3E-81 T 09-03-2017 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 RG43_RS13640 7451d958824a1e58e354194464bf3167 1174 SUPERFAMILY SSF52518 2 254 8.53E-72 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS13640 7451d958824a1e58e354194464bf3167 1174 SUPERFAMILY SSF52922 256 411 6.0E-43 T 09-03-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RG43_RS13640 7451d958824a1e58e354194464bf3167 1174 Gene3D G3DSA:3.40.50.920 255 413 1.2E-62 T 09-03-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RG43_RS14940 c9393f4196dbd6cbfcecd5ecfa7d77c4 233 SUPERFAMILY SSF52540 5 224 8.12E-71 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS14940 c9393f4196dbd6cbfcecd5ecfa7d77c4 233 Gene3D G3DSA:3.40.50.300 5 226 6.0E-70 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS14940 c9393f4196dbd6cbfcecd5ecfa7d77c4 233 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS14940 c9393f4196dbd6cbfcecd5ecfa7d77c4 233 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 5 224 2.2E-113 T 09-03-2017 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 RG43_RS14940 c9393f4196dbd6cbfcecd5ecfa7d77c4 233 SMART SM00382 34 222 5.6E-14 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS14940 c9393f4196dbd6cbfcecd5ecfa7d77c4 233 Pfam PF00005 ABC transporter 25 173 1.1E-36 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS07100 e4a238e39ae621c3167740b8cdac11f7 284 Gene3D G3DSA:3.40.50.1820 39 276 9.0E-51 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS07100 e4a238e39ae621c3167740b8cdac11f7 284 SUPERFAMILY SSF53474 23 280 2.59E-46 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS07100 e4a238e39ae621c3167740b8cdac11f7 284 Pfam PF12146 Serine aminopeptidase, S33 77 187 3.9E-13 T 09-03-2017 IPR022742 Serine aminopeptidase, S33 RG43_RS05290 9c8f7929d68cfe51e355a10748a5d223 88 Pfam PF03937 Flavinator of succinate dehydrogenase 6 75 1.2E-25 T 09-03-2017 IPR005631 Flavinator of succinate dehydrogenase RG43_RS05290 9c8f7929d68cfe51e355a10748a5d223 88 SUPERFAMILY SSF109910 1 78 4.18E-27 T 09-03-2017 IPR005631 Flavinator of succinate dehydrogenase RG43_RS05290 9c8f7929d68cfe51e355a10748a5d223 88 Gene3D G3DSA:1.10.150.250 2 85 3.9E-32 T 09-03-2017 IPR005631 Flavinator of succinate dehydrogenase RG43_RS02610 469bcd87fbeaaa094be5d124db30d821 367 SUPERFAMILY SSF161098 154 346 6.02E-35 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS02610 469bcd87fbeaaa094be5d124db30d821 367 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 156 252 6.2E-20 T 09-03-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RG43_RS02610 469bcd87fbeaaa094be5d124db30d821 367 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 174 360 2.7E-26 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS02610 469bcd87fbeaaa094be5d124db30d821 367 Gene3D G3DSA:1.10.3720.10 153 361 3.5E-38 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS12305 40d8334d4e45c874760b6cc92156fced 101 Pfam PF08803 Putative mono-oxygenase ydhR 4 98 4.4E-41 T 09-03-2017 IPR014910 Putative monooxygenase YdhR RG43_RS12305 40d8334d4e45c874760b6cc92156fced 101 SUPERFAMILY SSF54909 4 96 1.23E-33 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel RG43_RS13780 47db5e055bb7017f9c4c8ce2cef96a93 513 Gene3D G3DSA:3.30.450.20 78 183 2.4E-14 T 09-03-2017 RG43_RS13780 47db5e055bb7017f9c4c8ce2cef96a93 513 SMART SM00091 80 147 2.1E-4 T 09-03-2017 IPR000014 PAS domain RG43_RS13780 47db5e055bb7017f9c4c8ce2cef96a93 513 SUPERFAMILY SSF55785 82 174 1.47E-8 T 09-03-2017 IPR000014 PAS domain RG43_RS13780 47db5e055bb7017f9c4c8ce2cef96a93 513 SUPERFAMILY SSF46689 454 507 4.93E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS13780 47db5e055bb7017f9c4c8ce2cef96a93 513 SUPERFAMILY SSF55021 2 69 3.51E-5 T 09-03-2017 RG43_RS13780 47db5e055bb7017f9c4c8ce2cef96a93 513 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 285 300 - T 09-03-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RG43_RS13780 47db5e055bb7017f9c4c8ce2cef96a93 513 Gene3D G3DSA:3.40.50.300 203 371 1.5E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS13780 47db5e055bb7017f9c4c8ce2cef96a93 513 Pfam PF00158 Sigma-54 interaction domain 207 365 1.8E-55 T 09-03-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RG43_RS13780 47db5e055bb7017f9c4c8ce2cef96a93 513 Gene3D G3DSA:1.10.10.60 450 507 2.2E-28 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS13780 47db5e055bb7017f9c4c8ce2cef96a93 513 Gene3D G3DSA:3.30.70.260 2 68 2.3E-5 T 09-03-2017 RG43_RS13780 47db5e055bb7017f9c4c8ce2cef96a93 513 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 412 421 - T 09-03-2017 IPR025944 Sigma-54 interaction domain, conserved site RG43_RS13780 47db5e055bb7017f9c4c8ce2cef96a93 513 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 460 507 2.3E-28 T 09-03-2017 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 RG43_RS13780 47db5e055bb7017f9c4c8ce2cef96a93 513 Gene3D G3DSA:1.10.8.60 372 442 7.0E-19 T 09-03-2017 RG43_RS13780 47db5e055bb7017f9c4c8ce2cef96a93 513 Pfam PF13188 PAS domain 82 135 6.8E-5 T 09-03-2017 IPR000014 PAS domain RG43_RS13780 47db5e055bb7017f9c4c8ce2cef96a93 513 SUPERFAMILY SSF52540 206 440 1.82E-58 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS13780 47db5e055bb7017f9c4c8ce2cef96a93 513 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 230 243 - T 09-03-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RG43_RS13780 47db5e055bb7017f9c4c8ce2cef96a93 513 SMART SM00382 226 363 6.6E-7 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS18730 db48d4e8f270845af318b767af7d6024 286 Gene3D G3DSA:3.10.129.10 125 284 4.3E-56 T 09-03-2017 IPR029069 HotDog domain RG43_RS18730 db48d4e8f270845af318b767af7d6024 286 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 2.4E-105 T 09-03-2017 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-75105 RG43_RS18730 db48d4e8f270845af318b767af7d6024 286 SUPERFAMILY SSF54637 5 114 2.95E-42 T 09-03-2017 IPR029069 HotDog domain RG43_RS18730 db48d4e8f270845af318b767af7d6024 286 Pfam PF13622 Thioesterase-like superfamily 32 282 6.0E-58 T 09-03-2017 RG43_RS18730 db48d4e8f270845af318b767af7d6024 286 SUPERFAMILY SSF54637 116 284 1.22E-58 T 09-03-2017 IPR029069 HotDog domain RG43_RS18730 db48d4e8f270845af318b767af7d6024 286 Gene3D G3DSA:3.10.129.10 5 116 6.2E-50 T 09-03-2017 IPR029069 HotDog domain RG43_RS18630 ebdc3c7c6a3cbbad7078da60c447d745 643 SUPERFAMILY SSF52540 35 221 2.1E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS18630 ebdc3c7c6a3cbbad7078da60c447d745 643 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 417 498 1.1E-20 T 09-03-2017 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS18630 ebdc3c7c6a3cbbad7078da60c447d745 643 Gene3D G3DSA:1.20.272.10 243 361 5.6E-49 T 09-03-2017 RG43_RS18630 ebdc3c7c6a3cbbad7078da60c447d745 643 Pfam PF13177 DNA polymerase III, delta subunit 20 178 4.0E-42 T 09-03-2017 RG43_RS18630 ebdc3c7c6a3cbbad7078da60c447d745 643 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 361 2.9E-32 T 09-03-2017 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 RG43_RS18630 ebdc3c7c6a3cbbad7078da60c447d745 643 SUPERFAMILY SSF48019 243 366 2.55E-36 T 09-03-2017 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 RG43_RS18630 ebdc3c7c6a3cbbad7078da60c447d745 643 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 356 8.2E-134 T 09-03-2017 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 RG43_RS18630 ebdc3c7c6a3cbbad7078da60c447d745 643 SMART SM00382 37 178 1.1E-7 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS18630 ebdc3c7c6a3cbbad7078da60c447d745 643 Gene3D G3DSA:3.40.50.300 15 166 8.0E-67 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS18630 ebdc3c7c6a3cbbad7078da60c447d745 643 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 1.8E-5 T 09-03-2017 IPR001270 ClpA/B family GO:0005524 RG43_RS18630 ebdc3c7c6a3cbbad7078da60c447d745 643 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 1.8E-5 T 09-03-2017 IPR001270 ClpA/B family GO:0005524 RG43_RS18630 ebdc3c7c6a3cbbad7078da60c447d745 643 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 500 640 2.4E-59 T 09-03-2017 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS18630 ebdc3c7c6a3cbbad7078da60c447d745 643 Gene3D G3DSA:1.10.8.60 167 242 1.1E-33 T 09-03-2017 RG43_RS25490 4ad6167c64f5d5775627bede00dd6363 190 Gene3D G3DSA:2.60.40.1090 26 189 8.4E-45 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS25490 4ad6167c64f5d5775627bede00dd6363 190 SUPERFAMILY SSF49401 28 189 1.19E-31 T 09-03-2017 IPR008966 Adhesion domain RG43_RS25490 4ad6167c64f5d5775627bede00dd6363 190 Pfam PF00419 Fimbrial protein 29 189 1.5E-17 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS25830 fc6d51953f67c437bdd39958c2e4ad8e 463 ProSitePatterns PS00942 glpT family of transporters signature. 156 172 - T 09-03-2017 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-3229133|Reactome: R-HSA-70153 RG43_RS25830 fc6d51953f67c437bdd39958c2e4ad8e 463 SUPERFAMILY SSF103473 18 451 2.62E-57 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS25830 fc6d51953f67c437bdd39958c2e4ad8e 463 Gene3D G3DSA:1.20.1250.20 30 231 2.7E-33 T 09-03-2017 RG43_RS25830 fc6d51953f67c437bdd39958c2e4ad8e 463 Gene3D G3DSA:1.20.1250.20 252 456 1.9E-29 T 09-03-2017 RG43_RS25830 fc6d51953f67c437bdd39958c2e4ad8e 463 PIRSF PIRSF002808 9 461 1.2E-100 T 09-03-2017 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 RG43_RS25830 fc6d51953f67c437bdd39958c2e4ad8e 463 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 426 4.8E-145 T 09-03-2017 RG43_RS25830 fc6d51953f67c437bdd39958c2e4ad8e 463 Pfam PF07690 Major Facilitator Superfamily 35 397 3.5E-33 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS15580 b59ecd7c2d3bc511b699647c1aed895c 85 Pfam PF00072 Response regulator receiver domain 5 79 4.6E-18 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS15580 b59ecd7c2d3bc511b699647c1aed895c 85 SUPERFAMILY SSF52172 3 79 1.11E-19 T 09-03-2017 IPR011006 CheY-like superfamily RG43_RS15580 b59ecd7c2d3bc511b699647c1aed895c 85 Gene3D G3DSA:3.40.50.2300 2 78 8.4E-20 T 09-03-2017 RG43_RS17310 4d17d3d2b7fa4e0ac10650da1a70d3c4 173 ProSitePatterns PS01068 OmpA-like domain. 105 149 - T 09-03-2017 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 RG43_RS17310 4d17d3d2b7fa4e0ac10650da1a70d3c4 173 SUPERFAMILY SSF103088 60 172 7.85E-35 T 09-03-2017 IPR006665 OmpA-like domain RG43_RS17310 4d17d3d2b7fa4e0ac10650da1a70d3c4 173 Gene3D G3DSA:3.30.1330.60 68 172 3.7E-35 T 09-03-2017 IPR006665 OmpA-like domain RG43_RS17310 4d17d3d2b7fa4e0ac10650da1a70d3c4 173 Pfam PF00691 OmpA family 72 167 4.4E-22 T 09-03-2017 IPR006665 OmpA-like domain RG43_RS17310 4d17d3d2b7fa4e0ac10650da1a70d3c4 173 PRINTS PR01021 OMPA domain signature 73 95 2.4E-17 T 09-03-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RG43_RS17310 4d17d3d2b7fa4e0ac10650da1a70d3c4 173 PRINTS PR01021 OMPA domain signature 118 134 2.4E-17 T 09-03-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RG43_RS17310 4d17d3d2b7fa4e0ac10650da1a70d3c4 173 PRINTS PR01021 OMPA domain signature 103 118 2.4E-17 T 09-03-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RG43_RS17310 4d17d3d2b7fa4e0ac10650da1a70d3c4 173 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 71 173 1.1E-46 T 09-03-2017 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 RG43_RS01130 6e17b4196ddf059bc95fe6d7846be733 523 Pfam PF10995 GGDEF I-site like or GIL domain 165 474 1.4E-121 T 09-03-2017 IPR017745 Cellulose biosynthesis protein BcsE RG43_RS01130 6e17b4196ddf059bc95fe6d7846be733 523 TIGRFAM TIGR03369 cellulose_bcsE: cellulose biosynthesis protein BcsE 161 475 2.1E-125 T 09-03-2017 IPR017745 Cellulose biosynthesis protein BcsE RG43_RS07455 36fc84169fa1036533c4d6df4a0e00fe 759 PIRSF PIRSF036684 1 758 0.0 T 09-03-2017 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 RG43_RS07455 36fc84169fa1036533c4d6df4a0e00fe 759 ProSitePatterns PS00331 Malic enzymes signature. 159 175 - T 09-03-2017 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 RG43_RS07455 36fc84169fa1036533c4d6df4a0e00fe 759 SUPERFAMILY SSF53223 10 161 3.53E-54 T 09-03-2017 RG43_RS07455 36fc84169fa1036533c4d6df4a0e00fe 759 Pfam PF00390 Malic enzyme, N-terminal domain 19 151 3.7E-29 T 09-03-2017 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RG43_RS07455 36fc84169fa1036533c4d6df4a0e00fe 759 Gene3D G3DSA:3.40.50.720 161 448 2.4E-89 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS07455 36fc84169fa1036533c4d6df4a0e00fe 759 SUPERFAMILY SSF51735 163 453 2.08E-86 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS07455 36fc84169fa1036533c4d6df4a0e00fe 759 SMART SM01274 18 151 1.7E-82 T 09-03-2017 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RG43_RS07455 36fc84169fa1036533c4d6df4a0e00fe 759 Gene3D G3DSA:3.40.50.10380 11 160 7.6E-52 T 09-03-2017 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RG43_RS07455 36fc84169fa1036533c4d6df4a0e00fe 759 Pfam PF01515 Phosphate acetyl/butaryl transferase 430 751 1.5E-102 T 09-03-2017 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 RG43_RS07455 36fc84169fa1036533c4d6df4a0e00fe 759 Pfam PF03949 Malic enzyme, NAD binding domain 165 360 1.3E-19 T 09-03-2017 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 RG43_RS07455 36fc84169fa1036533c4d6df4a0e00fe 759 SMART SM00919 163 401 9.7E-142 T 09-03-2017 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 RG43_RS07455 36fc84169fa1036533c4d6df4a0e00fe 759 SUPERFAMILY SSF53659 430 754 1.97E-92 T 09-03-2017 RG43_RS07455 36fc84169fa1036533c4d6df4a0e00fe 759 Gene3D G3DSA:3.40.50.10750 569 726 3.1E-55 T 09-03-2017 RG43_RS16780 8d228422e8e573c3ca46317aa66388ac 346 SMART SM00876 220 312 6.8E-49 T 09-03-2017 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 RG43_RS16780 8d228422e8e573c3ca46317aa66388ac 346 Pfam PF04055 Radical SAM superfamily 50 203 6.5E-18 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 RG43_RS16780 8d228422e8e573c3ca46317aa66388ac 346 SMART SM00729 43 255 2.6E-43 T 09-03-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RG43_RS16780 8d228422e8e573c3ca46317aa66388ac 346 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 1.3E-20 T 09-03-2017 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 RG43_RS16780 8d228422e8e573c3ca46317aa66388ac 346 TIGRFAM TIGR00433 bioB: biotin synthase 14 310 1.7E-125 T 09-03-2017 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 RG43_RS16780 8d228422e8e573c3ca46317aa66388ac 346 Gene3D G3DSA:3.20.20.70 6 314 1.0E-107 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS16780 8d228422e8e573c3ca46317aa66388ac 346 PIRSF PIRSF001619 1 319 7.0E-141 T 09-03-2017 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 RG43_RS16780 8d228422e8e573c3ca46317aa66388ac 346 SUPERFAMILY SSF102114 6 313 1.57E-95 T 09-03-2017 RG43_RS16780 8d228422e8e573c3ca46317aa66388ac 346 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.848 T 09-03-2017 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 RG43_RS18835 925c1148bd9b451cefa9b48d96afa4ef 315 PIRSF PIRSF000292 1 313 2.8E-134 T 09-03-2017 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 RG43_RS18835 925c1148bd9b451cefa9b48d96afa4ef 315 Gene3D G3DSA:1.10.287.90 29 113 4.4E-37 T 09-03-2017 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RG43_RS18835 925c1148bd9b451cefa9b48d96afa4ef 315 SUPERFAMILY SSF81464 29 116 8.18E-24 T 09-03-2017 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RG43_RS18835 925c1148bd9b451cefa9b48d96afa4ef 315 Pfam PF06481 COX Aromatic Rich Motif 239 285 9.2E-19 T 09-03-2017 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 RG43_RS18835 925c1148bd9b451cefa9b48d96afa4ef 315 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 149 218 2.2E-5 T 09-03-2017 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RG43_RS18835 925c1148bd9b451cefa9b48d96afa4ef 315 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 13 239 2.7E-124 T 09-03-2017 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 RG43_RS18835 925c1148bd9b451cefa9b48d96afa4ef 315 Gene3D G3DSA:2.60.40.420 121 281 2.4E-42 T 09-03-2017 IPR008972 Cupredoxin RG43_RS18835 925c1148bd9b451cefa9b48d96afa4ef 315 SUPERFAMILY SSF49503 120 282 1.58E-54 T 09-03-2017 IPR008972 Cupredoxin RG43_RS09455 d678dd3183c03082e3ca47987aab09b0 1040 SUPERFAMILY SSF82693 146 191 1.7E-21 T 09-03-2017 RG43_RS09455 d678dd3183c03082e3ca47987aab09b0 1040 SUPERFAMILY SSF82693 277 333 1.7E-21 T 09-03-2017 RG43_RS09455 d678dd3183c03082e3ca47987aab09b0 1040 SUPERFAMILY SSF82714 192 275 8.24E-17 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RG43_RS09455 d678dd3183c03082e3ca47987aab09b0 1040 SUPERFAMILY SSF82866 299 498 6.67E-45 T 09-03-2017 RG43_RS09455 d678dd3183c03082e3ca47987aab09b0 1040 Pfam PF00873 AcrB/AcrD/AcrF family 13 1022 0.0 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS09455 d678dd3183c03082e3ca47987aab09b0 1040 SUPERFAMILY SSF82866 800 1028 1.57E-45 T 09-03-2017 RG43_RS09455 d678dd3183c03082e3ca47987aab09b0 1040 Gene3D G3DSA:3.30.2090.10 719 804 1.1E-17 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RG43_RS09455 d678dd3183c03082e3ca47987aab09b0 1040 SUPERFAMILY SSF82714 719 800 7.59E-17 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RG43_RS09455 d678dd3183c03082e3ca47987aab09b0 1040 SUPERFAMILY SSF82693 565 661 1.55E-17 T 09-03-2017 RG43_RS09455 d678dd3183c03082e3ca47987aab09b0 1040 Gene3D G3DSA:1.10.3850.10 807 1024 3.6E-56 T 09-03-2017 RG43_RS09455 d678dd3183c03082e3ca47987aab09b0 1040 Hamap MF_01423 Multidrug resistance protein MdtB [mdtB]. 1 1037 33.699 T 09-03-2017 IPR022831 Multidrug resistance protein MdtB RG43_RS09455 d678dd3183c03082e3ca47987aab09b0 1040 SUPERFAMILY SSF82693 49 138 1.65E-23 T 09-03-2017 RG43_RS09455 d678dd3183c03082e3ca47987aab09b0 1040 Gene3D G3DSA:3.30.2090.10 192 275 2.9E-18 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RG43_RS09455 d678dd3183c03082e3ca47987aab09b0 1040 Gene3D G3DSA:3.30.70.1430 49 151 4.9E-30 T 09-03-2017 RG43_RS09455 d678dd3183c03082e3ca47987aab09b0 1040 Gene3D G3DSA:3.30.70.1430 568 658 9.2E-13 T 09-03-2017 RG43_RS09455 d678dd3183c03082e3ca47987aab09b0 1040 Gene3D G3DSA:1.20.1640.10 294 509 1.5E-54 T 09-03-2017 RG43_RS09455 d678dd3183c03082e3ca47987aab09b0 1040 PRINTS PR00702 Acriflavin resistance protein family signature 47 65 4.2E-81 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS09455 d678dd3183c03082e3ca47987aab09b0 1040 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 4.2E-81 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS09455 d678dd3183c03082e3ca47987aab09b0 1040 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 4.2E-81 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS09455 d678dd3183c03082e3ca47987aab09b0 1040 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 4.2E-81 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS09455 d678dd3183c03082e3ca47987aab09b0 1040 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 4.2E-81 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS09455 d678dd3183c03082e3ca47987aab09b0 1040 PRINTS PR00702 Acriflavin resistance protein family signature 19 43 4.2E-81 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS09455 d678dd3183c03082e3ca47987aab09b0 1040 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 4.2E-81 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS09455 d678dd3183c03082e3ca47987aab09b0 1040 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 4.2E-81 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS09455 d678dd3183c03082e3ca47987aab09b0 1040 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 4.2E-81 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS08230 c4cdd1b70c465cb610c9f2b2a1983a58 260 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 253 6.1E-102 T 09-03-2017 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 RG43_RS08230 c4cdd1b70c465cb610c9f2b2a1983a58 260 Gene3D G3DSA:3.40.190.10 116 212 9.8E-32 T 09-03-2017 RG43_RS08230 c4cdd1b70c465cb610c9f2b2a1983a58 260 SUPERFAMILY SSF53850 1 257 6.29E-66 T 09-03-2017 RG43_RS08230 c4cdd1b70c465cb610c9f2b2a1983a58 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 254 2.0E-63 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RG43_RS08230 c4cdd1b70c465cb610c9f2b2a1983a58 260 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 50 63 - T 09-03-2017 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 RG43_RS08230 c4cdd1b70c465cb610c9f2b2a1983a58 260 Gene3D G3DSA:3.40.190.10 215 257 2.3E-43 T 09-03-2017 RG43_RS08230 c4cdd1b70c465cb610c9f2b2a1983a58 260 Gene3D G3DSA:3.40.190.10 26 113 2.3E-43 T 09-03-2017 RG43_RS08230 c4cdd1b70c465cb610c9f2b2a1983a58 260 SMART SM00062 27 256 4.4E-72 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RG43_RS24030 98d52b548c339a246e3ae44bbf25d557 726 Gene3D G3DSA:1.10.420.10 579 700 8.3E-47 T 09-03-2017 RG43_RS24030 98d52b548c339a246e3ae44bbf25d557 726 ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 259 269 - T 09-03-2017 IPR019793 Peroxidases heam-ligand binding site Reactome: R-HSA-2408557 RG43_RS24030 98d52b548c339a246e3ae44bbf25d557 726 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 18 726 0.0 T 09-03-2017 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 RG43_RS24030 98d52b548c339a246e3ae44bbf25d557 726 Pfam PF00141 Peroxidase 77 396 2.9E-48 T 09-03-2017 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 RG43_RS24030 98d52b548c339a246e3ae44bbf25d557 726 Pfam PF00141 Peroxidase 403 700 2.6E-35 T 09-03-2017 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 RG43_RS24030 98d52b548c339a246e3ae44bbf25d557 726 SUPERFAMILY SSF48113 30 429 2.5E-141 T 09-03-2017 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 RG43_RS24030 98d52b548c339a246e3ae44bbf25d557 726 Gene3D G3DSA:1.10.420.10 252 274 5.8E-46 T 09-03-2017 RG43_RS24030 98d52b548c339a246e3ae44bbf25d557 726 Gene3D G3DSA:1.10.420.10 310 407 5.8E-46 T 09-03-2017 RG43_RS24030 98d52b548c339a246e3ae44bbf25d557 726 PRINTS PR00458 Haem peroxidase superfamily signature 259 274 3.4E-19 T 09-03-2017 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 RG43_RS24030 98d52b548c339a246e3ae44bbf25d557 726 PRINTS PR00458 Haem peroxidase superfamily signature 318 333 3.4E-19 T 09-03-2017 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 RG43_RS24030 98d52b548c339a246e3ae44bbf25d557 726 PRINTS PR00458 Haem peroxidase superfamily signature 157 174 3.4E-19 T 09-03-2017 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 RG43_RS24030 98d52b548c339a246e3ae44bbf25d557 726 PRINTS PR00458 Haem peroxidase superfamily signature 175 187 3.4E-19 T 09-03-2017 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 RG43_RS24030 98d52b548c339a246e3ae44bbf25d557 726 PRINTS PR00458 Haem peroxidase superfamily signature 97 111 3.4E-19 T 09-03-2017 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 RG43_RS24030 98d52b548c339a246e3ae44bbf25d557 726 SUPERFAMILY SSF48113 435 725 6.19E-106 T 09-03-2017 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 RG43_RS24030 98d52b548c339a246e3ae44bbf25d557 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 74 99 8.4E-53 T 09-03-2017 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 RG43_RS24030 98d52b548c339a246e3ae44bbf25d557 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 479 505 8.4E-53 T 09-03-2017 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 RG43_RS24030 98d52b548c339a246e3ae44bbf25d557 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 33 55 8.4E-53 T 09-03-2017 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 RG43_RS24030 98d52b548c339a246e3ae44bbf25d557 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 267 290 8.4E-53 T 09-03-2017 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 RG43_RS24030 98d52b548c339a246e3ae44bbf25d557 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 59 72 8.4E-53 T 09-03-2017 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 RG43_RS24030 98d52b548c339a246e3ae44bbf25d557 726 Hamap MF_01961 Catalase-peroxidase [katG]. 11 726 39.622 T 09-03-2017 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 RG43_RS24030 98d52b548c339a246e3ae44bbf25d557 726 ProSitePatterns PS00436 Peroxidases active site signature. 97 108 - T 09-03-2017 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 RG43_RS24030 98d52b548c339a246e3ae44bbf25d557 726 Gene3D G3DSA:1.10.520.10 54 251 5.6E-69 T 09-03-2017 RG43_RS24030 98d52b548c339a246e3ae44bbf25d557 726 Gene3D G3DSA:1.10.520.10 432 578 2.3E-52 T 09-03-2017 RG43_RS24030 98d52b548c339a246e3ae44bbf25d557 726 Gene3D G3DSA:1.10.520.10 704 725 2.3E-52 T 09-03-2017 RG43_RS07920 1fdcb94bb9ad6d7c42057cf60d2ca55e 512 Gene3D G3DSA:1.20.1250.20 270 505 5.8E-18 T 09-03-2017 RG43_RS07920 1fdcb94bb9ad6d7c42057cf60d2ca55e 512 SUPERFAMILY SSF103473 479 504 5.49E-69 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS07920 1fdcb94bb9ad6d7c42057cf60d2ca55e 512 SUPERFAMILY SSF103473 255 427 5.49E-69 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS07920 1fdcb94bb9ad6d7c42057cf60d2ca55e 512 SUPERFAMILY SSF103473 7 197 5.49E-69 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS07920 1fdcb94bb9ad6d7c42057cf60d2ca55e 512 Gene3D G3DSA:1.20.1250.20 17 198 4.4E-32 T 09-03-2017 RG43_RS07920 1fdcb94bb9ad6d7c42057cf60d2ca55e 512 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 19 502 1.9E-172 T 09-03-2017 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 RG43_RS07920 1fdcb94bb9ad6d7c42057cf60d2ca55e 512 Pfam PF07690 Major Facilitator Superfamily 23 417 1.6E-51 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS15815 298a8019d976ad8121c3d8846f20d82e 346 PRINTS PR01021 OMPA domain signature 270 286 9.5E-24 T 09-03-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RG43_RS15815 298a8019d976ad8121c3d8846f20d82e 346 PRINTS PR01021 OMPA domain signature 223 245 9.5E-24 T 09-03-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RG43_RS15815 298a8019d976ad8121c3d8846f20d82e 346 PRINTS PR01021 OMPA domain signature 255 270 9.5E-24 T 09-03-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RG43_RS15815 298a8019d976ad8121c3d8846f20d82e 346 ProSitePatterns PS01068 OmpA-like domain. 257 301 - T 09-03-2017 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 RG43_RS15815 298a8019d976ad8121c3d8846f20d82e 346 PRINTS PR01022 Outer membrane protein A signature 279 298 1.6E-72 T 09-03-2017 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 RG43_RS15815 298a8019d976ad8121c3d8846f20d82e 346 PRINTS PR01022 Outer membrane protein A signature 313 326 1.6E-72 T 09-03-2017 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 RG43_RS15815 298a8019d976ad8121c3d8846f20d82e 346 PRINTS PR01022 Outer membrane protein A signature 165 179 1.6E-72 T 09-03-2017 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 RG43_RS15815 298a8019d976ad8121c3d8846f20d82e 346 PRINTS PR01022 Outer membrane protein A signature 107 123 1.6E-72 T 09-03-2017 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 RG43_RS15815 298a8019d976ad8121c3d8846f20d82e 346 PRINTS PR01022 Outer membrane protein A signature 179 193 1.6E-72 T 09-03-2017 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 RG43_RS15815 298a8019d976ad8121c3d8846f20d82e 346 PRINTS PR01022 Outer membrane protein A signature 240 259 1.6E-72 T 09-03-2017 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 RG43_RS15815 298a8019d976ad8121c3d8846f20d82e 346 PRINTS PR01022 Outer membrane protein A signature 211 226 1.6E-72 T 09-03-2017 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 RG43_RS15815 298a8019d976ad8121c3d8846f20d82e 346 Gene3D G3DSA:3.30.1330.60 212 334 5.8E-42 T 09-03-2017 IPR006665 OmpA-like domain RG43_RS15815 298a8019d976ad8121c3d8846f20d82e 346 SUPERFAMILY SSF56925 22 195 7.06E-47 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RG43_RS15815 298a8019d976ad8121c3d8846f20d82e 346 SUPERFAMILY SSF103088 211 334 3.14E-36 T 09-03-2017 IPR006665 OmpA-like domain RG43_RS15815 298a8019d976ad8121c3d8846f20d82e 346 Pfam PF01389 OmpA-like transmembrane domain 23 195 5.1E-76 T 09-03-2017 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 RG43_RS15815 298a8019d976ad8121c3d8846f20d82e 346 Pfam PF00691 OmpA family 222 317 3.4E-23 T 09-03-2017 IPR006665 OmpA-like domain RG43_RS15815 298a8019d976ad8121c3d8846f20d82e 346 Gene3D G3DSA:2.40.160.20 11 211 7.0E-81 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RG43_RS04235 ba93fe7f1c1c81f1cfece9327cc8c2fd 95 ProDom PD065638 YGHW CYTOPLASMIC STY3323 1 95 3.0E-51 T 09-03-2017 IPR022574 Protein of unknown function DUF2623 RG43_RS04235 ba93fe7f1c1c81f1cfece9327cc8c2fd 95 Pfam PF11115 Protein of unknown function (DUF2623) 1 92 6.9E-48 T 09-03-2017 IPR022574 Protein of unknown function DUF2623 RG43_RS26610 ba93fe7f1c1c81f1cfece9327cc8c2fd 95 ProDom PD065638 YGHW CYTOPLASMIC STY3323 1 95 3.0E-51 T 09-03-2017 IPR022574 Protein of unknown function DUF2623 RG43_RS26610 ba93fe7f1c1c81f1cfece9327cc8c2fd 95 Pfam PF11115 Protein of unknown function (DUF2623) 1 92 6.9E-48 T 09-03-2017 IPR022574 Protein of unknown function DUF2623 RG43_RS18045 ba13364ddcd3ee684303191720b2848a 142 PRINTS PR01438 Universal stress protein signature 120 142 2.1E-14 T 09-03-2017 IPR006015 Universal stress protein A RG43_RS18045 ba13364ddcd3ee684303191720b2848a 142 PRINTS PR01438 Universal stress protein signature 2 20 2.1E-14 T 09-03-2017 IPR006015 Universal stress protein A RG43_RS18045 ba13364ddcd3ee684303191720b2848a 142 PRINTS PR01438 Universal stress protein signature 103 115 2.1E-14 T 09-03-2017 IPR006015 Universal stress protein A RG43_RS18045 ba13364ddcd3ee684303191720b2848a 142 Pfam PF00582 Universal stress protein family 1 142 1.2E-27 T 09-03-2017 IPR006016 UspA GO:0006950 RG43_RS18045 ba13364ddcd3ee684303191720b2848a 142 Gene3D G3DSA:3.40.50.620 2 142 6.3E-29 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS18045 ba13364ddcd3ee684303191720b2848a 142 SUPERFAMILY SSF52402 2 142 3.68E-27 T 09-03-2017 RG43_RS22415 af2906e92111637e5375c4c299f5ca80 321 SUPERFAMILY SSF103481 222 309 1.44E-6 T 09-03-2017 RG43_RS22415 af2906e92111637e5375c4c299f5ca80 321 SUPERFAMILY SSF103481 43 136 6.15E-9 T 09-03-2017 RG43_RS22415 af2906e92111637e5375c4c299f5ca80 321 Pfam PF00892 EamA-like transporter family 3 123 1.1E-15 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 RG43_RS05340 496c3373504c45480848d2d7c27510a7 482 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 29 440 2.0E-136 T 09-03-2017 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 RG43_RS05340 496c3373504c45480848d2d7c27510a7 482 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 357 377 - T 09-03-2017 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 RG43_RS05340 496c3373504c45480848d2d7c27510a7 482 Pfam PF00860 Permease family 29 408 8.5E-122 T 09-03-2017 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RG43_RS05340 496c3373504c45480848d2d7c27510a7 482 TIGRFAM TIGR03173 pbuX: xanthine permease 33 443 1.9E-153 T 09-03-2017 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 RG43_RS16080 060a51c91c15fb6764d5ea2d7f7ffcc4 246 Pfam PF13353 4Fe-4S single cluster domain 16 141 5.9E-18 T 09-03-2017 RG43_RS16080 060a51c91c15fb6764d5ea2d7f7ffcc4 246 Gene3D G3DSA:3.80.30.10 69 245 3.5E-71 T 09-03-2017 RG43_RS16080 060a51c91c15fb6764d5ea2d7f7ffcc4 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 239 4.8E-108 T 09-03-2017 IPR012838 Pyruvate formate-lyase activating enzyme GO:0043365|GO:0055114 RG43_RS16080 060a51c91c15fb6764d5ea2d7f7ffcc4 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 09-03-2017 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 RG43_RS16080 060a51c91c15fb6764d5ea2d7f7ffcc4 246 Pfam PF04055 Radical SAM superfamily 24 178 1.4E-31 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 RG43_RS16080 060a51c91c15fb6764d5ea2d7f7ffcc4 246 SUPERFAMILY SSF102114 23 217 2.55E-24 T 09-03-2017 RG43_RS23120 75d03d4c60296330f17311f6bbe04e69 185 Pfam PF13238 AAA domain 6 139 6.5E-10 T 09-03-2017 RG43_RS23120 75d03d4c60296330f17311f6bbe04e69 185 Gene3D G3DSA:3.40.50.300 2 25 2.3E-14 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS23120 75d03d4c60296330f17311f6bbe04e69 185 Gene3D G3DSA:3.40.50.300 73 154 2.3E-14 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS23120 75d03d4c60296330f17311f6bbe04e69 185 SMART SM00072 2 179 5.1E-37 T 09-03-2017 IPR008145 Guanylate kinase/L-type calcium channel beta subunit RG43_RS23120 75d03d4c60296330f17311f6bbe04e69 185 Hamap MF_00836 Ribose 1,5-bisphosphate phosphokinase PhnN [phnN]. 2 176 34.799 T 09-03-2017 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532 RG43_RS23120 75d03d4c60296330f17311f6bbe04e69 185 TIGRFAM TIGR02322 phosphon_PhnN: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN 3 178 4.5E-74 T 09-03-2017 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532 RG43_RS23120 75d03d4c60296330f17311f6bbe04e69 185 SUPERFAMILY SSF52540 3 178 9.35E-33 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS04500 d5f92616ac95356f85c4983c5224d61a 158 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 107 112 - T 09-03-2017 IPR020891 Uncharacterised protein family UPF0758, conserved site RG43_RS04500 d5f92616ac95356f85c4983c5224d61a 158 Gene3D G3DSA:3.40.140.10 36 158 1.5E-50 T 09-03-2017 RG43_RS04500 d5f92616ac95356f85c4983c5224d61a 158 SUPERFAMILY SSF102712 83 124 7.45E-5 T 09-03-2017 RG43_RS04500 d5f92616ac95356f85c4983c5224d61a 158 Pfam PF04002 RadC-like JAB domain 38 157 1.0E-43 T 09-03-2017 IPR025657 RadC-like JAB domain RG43_RS04500 d5f92616ac95356f85c4983c5224d61a 158 TIGRFAM TIGR00608 radc: DNA repair protein RadC 36 158 1.8E-44 T 09-03-2017 IPR001405 RadC protein RG43_RS25555 bb5e2f7e8e84957c8427189d6f64abd1 389 Pfam PF00756 Putative esterase 150 309 3.4E-18 T 09-03-2017 IPR000801 Putative esterase Reactome: R-HSA-156590 RG43_RS25555 bb5e2f7e8e84957c8427189d6f64abd1 389 SUPERFAMILY SSF81296 45 109 5.77E-10 T 09-03-2017 IPR014756 Immunoglobulin E-set RG43_RS25555 bb5e2f7e8e84957c8427189d6f64abd1 389 Gene3D G3DSA:3.40.50.1820 130 389 9.2E-66 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS25555 bb5e2f7e8e84957c8427189d6f64abd1 389 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 44 103 2.0E-8 T 09-03-2017 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 RG43_RS25555 bb5e2f7e8e84957c8427189d6f64abd1 389 Gene3D G3DSA:2.60.40.10 42 102 5.8E-10 T 09-03-2017 IPR013783 Immunoglobulin-like fold RG43_RS25555 bb5e2f7e8e84957c8427189d6f64abd1 389 SUPERFAMILY SSF53474 137 389 4.9E-38 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS00090 5c07c17edf0f30dbf662f5bce8f3b32b 332 Pfam PF01032 FecCD transport family 18 330 1.7E-85 T 09-03-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 RG43_RS00090 5c07c17edf0f30dbf662f5bce8f3b32b 332 Gene3D G3DSA:1.10.3470.10 6 331 1.5E-93 T 09-03-2017 IPR029022 ABC transporter, BtuC-like RG43_RS00090 5c07c17edf0f30dbf662f5bce8f3b32b 332 SUPERFAMILY SSF81345 10 331 4.84E-75 T 09-03-2017 IPR029022 ABC transporter, BtuC-like RG43_RS22905 d062e9d2d6b81e1558c889f03f3e13ea 715 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 14 124 4.5E-29 T 09-03-2017 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 RG43_RS22905 d062e9d2d6b81e1558c889f03f3e13ea 715 SUPERFAMILY SSF55904 567 708 5.75E-45 T 09-03-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 RG43_RS22905 d062e9d2d6b81e1558c889f03f3e13ea 715 Gene3D G3DSA:3.90.100.10 587 714 5.4E-39 T 09-03-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 RG43_RS22905 d062e9d2d6b81e1558c889f03f3e13ea 715 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 130 545 5.3E-199 T 09-03-2017 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 RG43_RS22905 d062e9d2d6b81e1558c889f03f3e13ea 715 SUPERFAMILY SSF53383 130 561 4.78E-106 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS22905 d062e9d2d6b81e1558c889f03f3e13ea 715 Gene3D G3DSA:3.40.640.10 130 423 2.1E-100 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS22905 d062e9d2d6b81e1558c889f03f3e13ea 715 PIRSF PIRSF009393 1 712 2.5E-287 T 09-03-2017 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 RG43_RS22905 d062e9d2d6b81e1558c889f03f3e13ea 715 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 09-03-2017 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 RG43_RS22905 d062e9d2d6b81e1558c889f03f3e13ea 715 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 570 700 8.6E-46 T 09-03-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 RG43_RS22905 d062e9d2d6b81e1558c889f03f3e13ea 715 Gene3D G3DSA:3.90.1150.10 426 586 1.0E-66 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RG43_RS24065 ed71ca1a6ad1c2f4bb5c0489dc3ced49 810 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 654 676 - T 09-03-2017 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 RG43_RS24065 ed71ca1a6ad1c2f4bb5c0489dc3ced49 810 ProSitePatterns PS00324 Aspartokinase signature. 14 22 - T 09-03-2017 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 RG43_RS24065 ed71ca1a6ad1c2f4bb5c0489dc3ced49 810 Gene3D G3DSA:3.40.1160.10 12 59 2.1E-47 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase RG43_RS24065 ed71ca1a6ad1c2f4bb5c0489dc3ced49 810 Gene3D G3DSA:3.40.1160.10 114 298 2.1E-47 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase RG43_RS24065 ed71ca1a6ad1c2f4bb5c0489dc3ced49 810 Gene3D G3DSA:3.40.50.720 457 628 1.8E-54 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS24065 ed71ca1a6ad1c2f4bb5c0489dc3ced49 810 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 15 453 2.5E-63 T 09-03-2017 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 RG43_RS24065 ed71ca1a6ad1c2f4bb5c0489dc3ced49 810 SUPERFAMILY SSF51735 457 630 3.55E-34 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS24065 ed71ca1a6ad1c2f4bb5c0489dc3ced49 810 SUPERFAMILY SSF55347 608 791 2.55E-48 T 09-03-2017 RG43_RS24065 ed71ca1a6ad1c2f4bb5c0489dc3ced49 810 PIRSF PIRSF000727 12 810 4.8E-304 T 09-03-2017 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+2.7.2.4+1.1.1.3|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4+1.1.1.3|KEGG: 00300+2.7.2.4+1.1.1.3|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 RG43_RS24065 ed71ca1a6ad1c2f4bb5c0489dc3ced49 810 Pfam PF00696 Amino acid kinase family 12 284 7.0E-44 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase RG43_RS24065 ed71ca1a6ad1c2f4bb5c0489dc3ced49 810 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 465 600 8.3E-27 T 09-03-2017 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 RG43_RS24065 ed71ca1a6ad1c2f4bb5c0489dc3ced49 810 Pfam PF00742 Homoserine dehydrogenase 608 803 2.0E-45 T 09-03-2017 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 RG43_RS24065 ed71ca1a6ad1c2f4bb5c0489dc3ced49 810 SUPERFAMILY SSF53633 12 299 4.06E-56 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase RG43_RS24065 ed71ca1a6ad1c2f4bb5c0489dc3ced49 810 Gene3D G3DSA:3.30.360.10 629 786 2.1E-53 T 09-03-2017 RG43_RS22725 f4489905763467b6194185fbd89d830f 322 Pfam PF02666 Phosphatidylserine decarboxylase 63 282 1.4E-59 T 09-03-2017 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 RG43_RS22725 f4489905763467b6194185fbd89d830f 322 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 49 286 1.2E-102 T 09-03-2017 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 RG43_RS22725 f4489905763467b6194185fbd89d830f 322 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 10 287 51.138 T 09-03-2017 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 RG43_RS12750 f93c3055ac92d45c031555eafe3d6935 808 SUPERFAMILY SSF50692 679 808 2.26E-38 T 09-03-2017 IPR009010 Aspartate decarboxylase-like domain RG43_RS12750 f93c3055ac92d45c031555eafe3d6935 808 SUPERFAMILY SSF53706 50 688 4.06E-173 T 09-03-2017 RG43_RS12750 f93c3055ac92d45c031555eafe3d6935 808 SMART SM00926 49 108 4.9E-10 T 09-03-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS12750 f93c3055ac92d45c031555eafe3d6935 808 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 49 108 9.7E-15 T 09-03-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS12750 f93c3055ac92d45c031555eafe3d6935 808 Gene3D G3DSA:2.20.25.90 46 111 2.8E-16 T 09-03-2017 RG43_RS12750 f93c3055ac92d45c031555eafe3d6935 808 Gene3D G3DSA:3.40.228.10 197 400 8.4E-82 T 09-03-2017 RG43_RS12750 f93c3055ac92d45c031555eafe3d6935 808 Pfam PF00384 Molybdopterin oxidoreductase 111 566 2.6E-96 T 09-03-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS12750 f93c3055ac92d45c031555eafe3d6935 808 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 10 808 0.0 T 09-03-2017 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 RG43_RS12750 f93c3055ac92d45c031555eafe3d6935 808 Pfam PF01568 Molydopterin dinucleotide binding domain 687 800 1.3E-27 T 09-03-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RG43_RS12750 f93c3055ac92d45c031555eafe3d6935 808 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 723 750 - T 09-03-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 RG43_RS12750 f93c3055ac92d45c031555eafe3d6935 808 Gene3D G3DSA:3.40.50.740 112 196 3.2E-81 T 09-03-2017 RG43_RS12750 f93c3055ac92d45c031555eafe3d6935 808 Gene3D G3DSA:3.40.50.740 401 646 3.2E-81 T 09-03-2017 RG43_RS12750 f93c3055ac92d45c031555eafe3d6935 808 Gene3D G3DSA:2.40.40.20 663 808 5.8E-56 T 09-03-2017 RG43_RS19065 9dec2d40793caa20093d5c6996a92b8c 152 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 17 143 4.6E-49 T 09-03-2017 IPR003791 Protein of unknown function UPF0178 RG43_RS19065 9dec2d40793caa20093d5c6996a92b8c 152 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 33.437 T 09-03-2017 IPR003791 Protein of unknown function UPF0178 RG43_RS08685 a4d0d02728a620eaca1f24bb25ab0c46 216 Gene3D G3DSA:1.10.10.10 126 207 4.4E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS08685 a4d0d02728a620eaca1f24bb25ab0c46 216 SMART SM00448 4 120 3.8E-15 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS08685 a4d0d02728a620eaca1f24bb25ab0c46 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS08685 a4d0d02728a620eaca1f24bb25ab0c46 216 SUPERFAMILY SSF52172 3 135 5.27E-21 T 09-03-2017 IPR011006 CheY-like superfamily RG43_RS08685 a4d0d02728a620eaca1f24bb25ab0c46 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 1.4E-18 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS08685 a4d0d02728a620eaca1f24bb25ab0c46 216 Hamap MF_00981 Transcriptional regulatory protein RcsB [rcsB]. 1 214 51.521 T 09-03-2017 IPR030864 Transcriptional regulatory protein RcsB GO:0000160|GO:0006355 RG43_RS08685 a4d0d02728a620eaca1f24bb25ab0c46 216 SMART SM00421 148 205 4.2E-16 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS08685 a4d0d02728a620eaca1f24bb25ab0c46 216 Gene3D G3DSA:3.40.50.2300 1 125 8.3E-21 T 09-03-2017 RG43_RS08685 a4d0d02728a620eaca1f24bb25ab0c46 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 4.0E-8 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS08685 a4d0d02728a620eaca1f24bb25ab0c46 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 4.0E-8 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS08685 a4d0d02728a620eaca1f24bb25ab0c46 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 4.0E-8 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS08685 a4d0d02728a620eaca1f24bb25ab0c46 216 SUPERFAMILY SSF46894 146 207 2.38E-16 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RG43_RS08685 a4d0d02728a620eaca1f24bb25ab0c46 216 Pfam PF00072 Response regulator receiver domain 6 120 1.2E-24 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS10165 a5a207873243aed0db6eba4ea3176e91 525 Gene3D G3DSA:3.40.50.980 16 178 2.8E-25 T 09-03-2017 RG43_RS10165 a5a207873243aed0db6eba4ea3176e91 525 Gene3D G3DSA:3.40.50.980 179 330 2.9E-37 T 09-03-2017 RG43_RS10165 a5a207873243aed0db6eba4ea3176e91 525 ProSitePatterns PS00455 Putative AMP-binding domain signature. 174 185 - T 09-03-2017 IPR020845 AMP-binding, conserved site RG43_RS10165 a5a207873243aed0db6eba4ea3176e91 525 Pfam PF13193 AMP-binding enzyme C-terminal domain 431 506 1.3E-14 T 09-03-2017 IPR025110 AMP-binding enzyme C-terminal domain RG43_RS10165 a5a207873243aed0db6eba4ea3176e91 525 Gene3D G3DSA:2.30.38.10 341 416 8.7E-22 T 09-03-2017 RG43_RS10165 a5a207873243aed0db6eba4ea3176e91 525 Pfam PF00501 AMP-binding enzyme 21 422 2.9E-78 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RG43_RS10165 a5a207873243aed0db6eba4ea3176e91 525 Gene3D G3DSA:3.30.300.30 417 519 6.0E-26 T 09-03-2017 RG43_RS10165 a5a207873243aed0db6eba4ea3176e91 525 SUPERFAMILY SSF56801 10 518 6.67E-126 T 09-03-2017 RG43_RS10315 a70de77ed797ab2e906e64d36481c2ec 228 Pfam PF02677 Uncharacterized BCR, COG1636 27 201 3.5E-64 T 09-03-2017 IPR003828 Protein of unknown function DUF208 RG43_RS08195 ffdc71b7070519e179a90fe09d929dc5 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 249 258 4.7E-39 T 09-03-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 RG43_RS08195 ffdc71b7070519e179a90fe09d929dc5 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 227 238 4.7E-39 T 09-03-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 RG43_RS08195 ffdc71b7070519e179a90fe09d929dc5 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 127 141 4.7E-39 T 09-03-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 RG43_RS08195 ffdc71b7070519e179a90fe09d929dc5 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 161 179 4.7E-39 T 09-03-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 RG43_RS08195 ffdc71b7070519e179a90fe09d929dc5 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 198 215 4.7E-39 T 09-03-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 RG43_RS08195 ffdc71b7070519e179a90fe09d929dc5 304 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 279 39.215 T 09-03-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 RG43_RS08195 ffdc71b7070519e179a90fe09d929dc5 304 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 281 1.7E-152 T 09-03-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 RG43_RS08195 ffdc71b7070519e179a90fe09d929dc5 304 SUPERFAMILY SSF52096 23 284 7.46E-92 T 09-03-2017 IPR029045 ClpP/crotonase-like domain RG43_RS08195 ffdc71b7070519e179a90fe09d929dc5 304 Pfam PF01039 Carboxyl transferase domain 54 241 3.5E-19 T 09-03-2017 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RG43_RS08195 ffdc71b7070519e179a90fe09d929dc5 304 Gene3D G3DSA:3.90.226.10 17 285 1.1E-81 T 09-03-2017 IPR029045 ClpP/crotonase-like domain RG43_RS06820 100ad01b672bb2cc33c180ab1f6f2298 127 ProSitePatterns PS00850 Glycine radical domain signature. 97 105 - T 09-03-2017 IPR019777 Formate C-acetyltransferase glycine radical, conserved site RG43_RS06820 100ad01b672bb2cc33c180ab1f6f2298 127 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 127 43.345 T 09-03-2017 IPR011140 Autonomous glycyl radical cofactor GrcA RG43_RS06820 100ad01b672bb2cc33c180ab1f6f2298 127 PIRSF PIRSF000378 2 127 3.3E-56 T 09-03-2017 IPR011140 Autonomous glycyl radical cofactor GrcA RG43_RS06820 100ad01b672bb2cc33c180ab1f6f2298 127 Pfam PF01228 Glycine radical 16 108 2.0E-22 T 09-03-2017 IPR001150 Glycine radical domain GO:0003824|GO:0008152 RG43_RS06820 100ad01b672bb2cc33c180ab1f6f2298 127 SUPERFAMILY SSF51998 64 126 3.25E-24 T 09-03-2017 RG43_RS06820 100ad01b672bb2cc33c180ab1f6f2298 127 Gene3D G3DSA:3.20.70.20 44 126 2.2E-34 T 09-03-2017 RG43_RS06820 100ad01b672bb2cc33c180ab1f6f2298 127 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 127 1.1E-70 T 09-03-2017 IPR011140 Autonomous glycyl radical cofactor GrcA RG43_RS05240 ce13746aecf14dbffa38a6d9eac8405a 392 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 3 387 8.0E-136 T 09-03-2017 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 RG43_RS05240 ce13746aecf14dbffa38a6d9eac8405a 392 Gene3D G3DSA:3.50.50.60 266 354 1.0E-37 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS05240 ce13746aecf14dbffa38a6d9eac8405a 392 Gene3D G3DSA:3.50.50.60 2 180 1.0E-37 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS05240 ce13746aecf14dbffa38a6d9eac8405a 392 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 292 305 - T 09-03-2017 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 RG43_RS05240 ce13746aecf14dbffa38a6d9eac8405a 392 SUPERFAMILY SSF51905 265 381 1.2E-52 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS05240 ce13746aecf14dbffa38a6d9eac8405a 392 SUPERFAMILY SSF51905 2 175 1.2E-52 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS05240 ce13746aecf14dbffa38a6d9eac8405a 392 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 3 388 2.1E-141 T 09-03-2017 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 RG43_RS05240 ce13746aecf14dbffa38a6d9eac8405a 392 Pfam PF01494 FAD binding domain 2 337 5.8E-22 T 09-03-2017 IPR002938 FAD-binding domain GO:0071949 RG43_RS05240 ce13746aecf14dbffa38a6d9eac8405a 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 3.6E-13 T 09-03-2017 RG43_RS05240 ce13746aecf14dbffa38a6d9eac8405a 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 3.6E-13 T 09-03-2017 RG43_RS05240 ce13746aecf14dbffa38a6d9eac8405a 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 3.6E-13 T 09-03-2017 RG43_RS05240 ce13746aecf14dbffa38a6d9eac8405a 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 3.6E-13 T 09-03-2017 RG43_RS13105 36a9a4610ce76e5efc5008059008fecd 466 TIGRFAM TIGR01788 Glu-decarb-GAD: glutamate decarboxylase 16 448 4.3E-209 T 09-03-2017 IPR010107 Glutamate decarboxylase GO:0004351|GO:0006536|GO:0030170 KEGG: 00250+4.1.1.15|KEGG: 00410+4.1.1.15|KEGG: 00430+4.1.1.15|KEGG: 00650+4.1.1.15|MetaCyc: PWY-4321 RG43_RS13105 36a9a4610ce76e5efc5008059008fecd 466 SUPERFAMILY SSF53383 6 451 1.09E-132 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS13105 36a9a4610ce76e5efc5008059008fecd 466 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 269 290 - T 09-03-2017 IPR021115 Pyridoxal-phosphate binding site GO:0016831 RG43_RS13105 36a9a4610ce76e5efc5008059008fecd 466 Gene3D G3DSA:3.40.640.10 75 321 2.0E-24 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS13105 36a9a4610ce76e5efc5008059008fecd 466 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 33 383 1.5E-114 T 09-03-2017 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 RG43_RS14525 6a0f28f7a21cfc27f20df0b8b89ec6ec 92 Pfam PF10762 Protein of unknown function (DUF2583) 1 87 6.1E-47 T 09-03-2017 IPR019698 Protein of unknown function DUF2583 RG43_RS09195 19ff1b5d6bf0dc49e6340de80d654268 239 Pfam PF04397 LytTr DNA-binding domain 144 237 1.6E-24 T 09-03-2017 IPR007492 LytTR DNA-binding domain GO:0003677 RG43_RS09195 19ff1b5d6bf0dc49e6340de80d654268 239 Pfam PF00072 Response regulator receiver domain 4 112 1.2E-25 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS09195 19ff1b5d6bf0dc49e6340de80d654268 239 Gene3D G3DSA:2.20.25.10 214 239 3.2E-7 T 09-03-2017 RG43_RS09195 19ff1b5d6bf0dc49e6340de80d654268 239 SMART SM00448 2 112 1.4E-29 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS09195 19ff1b5d6bf0dc49e6340de80d654268 239 SUPERFAMILY SSF52172 1 123 8.97E-32 T 09-03-2017 IPR011006 CheY-like superfamily RG43_RS09195 19ff1b5d6bf0dc49e6340de80d654268 239 SMART SM00850 143 238 4.5E-27 T 09-03-2017 IPR007492 LytTR DNA-binding domain GO:0003677 RG43_RS09195 19ff1b5d6bf0dc49e6340de80d654268 239 Gene3D G3DSA:3.40.50.2300 1 122 5.4E-32 T 09-03-2017 RG43_RS09195 19ff1b5d6bf0dc49e6340de80d654268 239 Gene3D G3DSA:2.40.50.40 135 201 1.2E-10 T 09-03-2017 RG43_RS24110 31936f801679313e38a4900fbcf62ec5 443 SUPERFAMILY SSF52540 3 441 5.13E-95 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS24110 31936f801679313e38a4900fbcf62ec5 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 43.818 T 09-03-2017 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 RG43_RS24110 31936f801679313e38a4900fbcf62ec5 443 SMART SM01086 335 434 3.3E-22 T 09-03-2017 IPR019489 Clp ATPase, C-terminal RG43_RS24110 31936f801679313e38a4900fbcf62ec5 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 106 6.9E-7 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 RG43_RS24110 31936f801679313e38a4900fbcf62ec5 443 Gene3D G3DSA:3.40.50.300 245 331 6.5E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS24110 31936f801679313e38a4900fbcf62ec5 443 Gene3D G3DSA:3.40.50.300 3 110 6.5E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS24110 31936f801679313e38a4900fbcf62ec5 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 188 329 8.6E-43 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 RG43_RS24110 31936f801679313e38a4900fbcf62ec5 443 Gene3D G3DSA:1.10.8.10 213 243 3.3E-34 T 09-03-2017 RG43_RS24110 31936f801679313e38a4900fbcf62ec5 443 Gene3D G3DSA:1.10.8.10 111 177 3.3E-34 T 09-03-2017 RG43_RS24110 31936f801679313e38a4900fbcf62ec5 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 8.9E-239 T 09-03-2017 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 RG43_RS24110 31936f801679313e38a4900fbcf62ec5 443 SMART SM00382 49 332 1.3E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS24110 31936f801679313e38a4900fbcf62ec5 443 Gene3D G3DSA:1.10.8.60 335 443 2.1E-34 T 09-03-2017 RG43_RS24110 31936f801679313e38a4900fbcf62ec5 443 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 335 405 2.3E-5 T 09-03-2017 IPR019489 Clp ATPase, C-terminal RG43_RS10580 a27c0b095a4885b3cefa031a22d5bfec 301 Pfam PF13276 HTH-like domain 62 104 2.2E-12 T 09-03-2017 IPR025948 HTH-like domain RG43_RS10580 a27c0b095a4885b3cefa031a22d5bfec 301 SUPERFAMILY SSF53098 125 291 1.13E-29 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS10580 a27c0b095a4885b3cefa031a22d5bfec 301 Pfam PF00665 Integrase core domain 124 243 2.3E-24 T 09-03-2017 IPR001584 Integrase, catalytic core GO:0015074 RG43_RS10580 a27c0b095a4885b3cefa031a22d5bfec 301 Gene3D G3DSA:3.30.420.10 119 282 6.4E-33 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS15060 a27c0b095a4885b3cefa031a22d5bfec 301 Pfam PF13276 HTH-like domain 62 104 2.2E-12 T 09-03-2017 IPR025948 HTH-like domain RG43_RS15060 a27c0b095a4885b3cefa031a22d5bfec 301 SUPERFAMILY SSF53098 125 291 1.13E-29 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS15060 a27c0b095a4885b3cefa031a22d5bfec 301 Pfam PF00665 Integrase core domain 124 243 2.3E-24 T 09-03-2017 IPR001584 Integrase, catalytic core GO:0015074 RG43_RS15060 a27c0b095a4885b3cefa031a22d5bfec 301 Gene3D G3DSA:3.30.420.10 119 282 6.4E-33 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS22180 a27c0b095a4885b3cefa031a22d5bfec 301 Pfam PF13276 HTH-like domain 62 104 2.2E-12 T 09-03-2017 IPR025948 HTH-like domain RG43_RS22180 a27c0b095a4885b3cefa031a22d5bfec 301 SUPERFAMILY SSF53098 125 291 1.13E-29 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS22180 a27c0b095a4885b3cefa031a22d5bfec 301 Pfam PF00665 Integrase core domain 124 243 2.3E-24 T 09-03-2017 IPR001584 Integrase, catalytic core GO:0015074 RG43_RS22180 a27c0b095a4885b3cefa031a22d5bfec 301 Gene3D G3DSA:3.30.420.10 119 282 6.4E-33 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS20135 a27c0b095a4885b3cefa031a22d5bfec 301 Pfam PF13276 HTH-like domain 62 104 2.2E-12 T 09-03-2017 IPR025948 HTH-like domain RG43_RS20135 a27c0b095a4885b3cefa031a22d5bfec 301 SUPERFAMILY SSF53098 125 291 1.13E-29 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS20135 a27c0b095a4885b3cefa031a22d5bfec 301 Pfam PF00665 Integrase core domain 124 243 2.3E-24 T 09-03-2017 IPR001584 Integrase, catalytic core GO:0015074 RG43_RS20135 a27c0b095a4885b3cefa031a22d5bfec 301 Gene3D G3DSA:3.30.420.10 119 282 6.4E-33 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS00280 a27c0b095a4885b3cefa031a22d5bfec 301 Pfam PF13276 HTH-like domain 62 104 2.2E-12 T 09-03-2017 IPR025948 HTH-like domain RG43_RS00280 a27c0b095a4885b3cefa031a22d5bfec 301 SUPERFAMILY SSF53098 125 291 1.13E-29 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS00280 a27c0b095a4885b3cefa031a22d5bfec 301 Pfam PF00665 Integrase core domain 124 243 2.3E-24 T 09-03-2017 IPR001584 Integrase, catalytic core GO:0015074 RG43_RS00280 a27c0b095a4885b3cefa031a22d5bfec 301 Gene3D G3DSA:3.30.420.10 119 282 6.4E-33 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS04205 5bdaec02fb5a7e801d2c81806ddbaf51 244 Pfam PF01618 MotA/TolQ/ExbB proton channel family 91 205 5.2E-35 T 09-03-2017 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 RG43_RS04205 5bdaec02fb5a7e801d2c81806ddbaf51 244 TIGRFAM TIGR02797 exbB: tonB-system energizer ExbB 11 222 9.1E-104 T 09-03-2017 IPR014164 TonB-system energizer ExbB type-1 GO:0006810|GO:0016020 RG43_RS26580 5bdaec02fb5a7e801d2c81806ddbaf51 244 Pfam PF01618 MotA/TolQ/ExbB proton channel family 91 205 5.2E-35 T 09-03-2017 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 RG43_RS26580 5bdaec02fb5a7e801d2c81806ddbaf51 244 TIGRFAM TIGR02797 exbB: tonB-system energizer ExbB 11 222 9.1E-104 T 09-03-2017 IPR014164 TonB-system energizer ExbB type-1 GO:0006810|GO:0016020 RG43_RS21205 43fa6a841f097691e2f0e6a8ef6bbdda 327 Gene3D G3DSA:3.40.190.10 179 284 4.4E-9 T 09-03-2017 RG43_RS21205 43fa6a841f097691e2f0e6a8ef6bbdda 327 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 119 136 - T 09-03-2017 IPR006061 Solute-binding family 1, conserved site GO:0005215|GO:0006810 RG43_RS21205 43fa6a841f097691e2f0e6a8ef6bbdda 327 Pfam PF13343 Bacterial extracellular solute-binding protein 73 289 2.6E-17 T 09-03-2017 RG43_RS21205 43fa6a841f097691e2f0e6a8ef6bbdda 327 SUPERFAMILY SSF53850 22 323 2.85E-64 T 09-03-2017 RG43_RS21205 43fa6a841f097691e2f0e6a8ef6bbdda 327 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 6 327 1.7E-194 T 09-03-2017 IPR005967 Proteobacterial thiamine ABC transporter, periplasmic binding protein GO:0005524|GO:0015888|GO:0030288|GO:0048502 RG43_RS21205 43fa6a841f097691e2f0e6a8ef6bbdda 327 Gene3D G3DSA:3.40.190.10 21 167 4.3E-27 T 09-03-2017 RG43_RS21205 43fa6a841f097691e2f0e6a8ef6bbdda 327 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 18 321 9.1E-157 T 09-03-2017 IPR005948 Thiamine ABC transporter periplasmic binding protein GO:0005215|GO:0006810|GO:0015888|GO:0030288|GO:0030975 RG43_RS12555 736ead59a1c86f8db8ff7aa982ef7b55 390 Pfam PF00155 Aminotransferase class I and II 30 379 2.4E-59 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RG43_RS12555 736ead59a1c86f8db8ff7aa982ef7b55 390 Gene3D G3DSA:3.40.640.10 44 239 3.4E-41 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS12555 736ead59a1c86f8db8ff7aa982ef7b55 390 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 4 386 1.7E-113 T 09-03-2017 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 RG43_RS12555 736ead59a1c86f8db8ff7aa982ef7b55 390 SUPERFAMILY SSF53383 1 386 6.32E-83 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS12555 736ead59a1c86f8db8ff7aa982ef7b55 390 Gene3D G3DSA:3.90.1150.10 240 384 2.6E-51 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RG43_RS21185 4d42f5f16566dbb9e6cade35cf385fe1 466 Pfam PF00330 Aconitase family (aconitate hydratase) 7 457 2.0E-156 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS21185 4d42f5f16566dbb9e6cade35cf385fe1 466 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 09-03-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 RG43_RS21185 4d42f5f16566dbb9e6cade35cf385fe1 466 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 09-03-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 RG43_RS21185 4d42f5f16566dbb9e6cade35cf385fe1 466 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 465 5.8E-284 T 09-03-2017 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 RG43_RS21185 4d42f5f16566dbb9e6cade35cf385fe1 466 Gene3D G3DSA:3.30.499.10 2 158 1.0E-23 T 09-03-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS21185 4d42f5f16566dbb9e6cade35cf385fe1 466 PRINTS PR00415 Aconitase family signature 286 300 3.5E-51 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS21185 4d42f5f16566dbb9e6cade35cf385fe1 466 PRINTS PR00415 Aconitase family signature 82 95 3.5E-51 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS21185 4d42f5f16566dbb9e6cade35cf385fe1 466 PRINTS PR00415 Aconitase family signature 119 132 3.5E-51 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS21185 4d42f5f16566dbb9e6cade35cf385fe1 466 PRINTS PR00415 Aconitase family signature 195 208 3.5E-51 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS21185 4d42f5f16566dbb9e6cade35cf385fe1 466 PRINTS PR00415 Aconitase family signature 343 354 3.5E-51 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS21185 4d42f5f16566dbb9e6cade35cf385fe1 466 PRINTS PR00415 Aconitase family signature 399 412 3.5E-51 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS21185 4d42f5f16566dbb9e6cade35cf385fe1 466 PRINTS PR00415 Aconitase family signature 209 222 3.5E-51 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS21185 4d42f5f16566dbb9e6cade35cf385fe1 466 PRINTS PR00415 Aconitase family signature 133 148 3.5E-51 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS21185 4d42f5f16566dbb9e6cade35cf385fe1 466 PRINTS PR00415 Aconitase family signature 108 116 3.5E-51 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS21185 4d42f5f16566dbb9e6cade35cf385fe1 466 Gene3D G3DSA:3.30.499.10 335 465 2.8E-63 T 09-03-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS21185 4d42f5f16566dbb9e6cade35cf385fe1 466 SUPERFAMILY SSF53732 2 464 5.1E-168 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS21185 4d42f5f16566dbb9e6cade35cf385fe1 466 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 466 62.866 T 09-03-2017 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 RG43_RS21185 4d42f5f16566dbb9e6cade35cf385fe1 466 Gene3D G3DSA:3.40.1060.10 166 279 9.9E-40 T 09-03-2017 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS04970 889c91fb5b6518f6e67c9ae705a3bf8d 96 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 10 81 4.7E-25 T 09-03-2017 IPR003746 Protein of unknown function DUF167 RG43_RS04970 889c91fb5b6518f6e67c9ae705a3bf8d 96 SMART SM01152 7 83 2.3E-37 T 09-03-2017 IPR003746 Protein of unknown function DUF167 RG43_RS04970 889c91fb5b6518f6e67c9ae705a3bf8d 96 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 4 91 8.1E-35 T 09-03-2017 IPR005228 Conserved hypothetical protein CHP00251 RG43_RS04970 889c91fb5b6518f6e67c9ae705a3bf8d 96 Gene3D G3DSA:3.30.1200.10 2 91 1.2E-30 T 09-03-2017 IPR003746 Protein of unknown function DUF167 RG43_RS04970 889c91fb5b6518f6e67c9ae705a3bf8d 96 SUPERFAMILY SSF69786 2 95 1.22E-32 T 09-03-2017 IPR003746 Protein of unknown function DUF167 RG43_RS04970 889c91fb5b6518f6e67c9ae705a3bf8d 96 Hamap MF_00634 UPF0235 protein YggU [yggU]. 7 93 20.455 T 09-03-2017 IPR003746 Protein of unknown function DUF167 RG43_RS05010 787bd82edfddb06fbb465de16234d839 235 Pfam PF04231 Endonuclease I 45 229 1.4E-46 T 09-03-2017 IPR007346 Endonuclease I GO:0004518 RG43_RS05010 787bd82edfddb06fbb465de16234d839 235 SUPERFAMILY SSF54060 26 230 1.65E-89 T 09-03-2017 RG43_RS22950 62bbf7dad703c9502be42d1679853d2e 239 Gene3D G3DSA:1.10.10.60 160 192 4.1E-4 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS22950 62bbf7dad703c9502be42d1679853d2e 239 SUPERFAMILY SSF52172 1 136 1.34E-28 T 09-03-2017 IPR011006 CheY-like superfamily RG43_RS22950 62bbf7dad703c9502be42d1679853d2e 239 SMART SM00448 2 117 5.5E-22 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS22950 62bbf7dad703c9502be42d1679853d2e 239 Gene3D G3DSA:3.40.50.2300 1 129 4.0E-24 T 09-03-2017 RG43_RS22950 62bbf7dad703c9502be42d1679853d2e 239 PIRSF PIRSF006171 1 230 1.9E-83 T 09-03-2017 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0001071|GO:0003677|GO:0005737|GO:0009605 RG43_RS22950 62bbf7dad703c9502be42d1679853d2e 239 Pfam PF00072 Response regulator receiver domain 4 117 4.5E-19 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS22065 1a8ed4e5a7a6beb190688975a4946006 182 Pfam PF00419 Fimbrial protein 33 182 3.0E-22 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS22065 1a8ed4e5a7a6beb190688975a4946006 182 Gene3D G3DSA:2.60.40.1090 31 182 4.1E-44 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS22065 1a8ed4e5a7a6beb190688975a4946006 182 SUPERFAMILY SSF49401 32 182 2.78E-36 T 09-03-2017 IPR008966 Adhesion domain RG43_RS14815 b6d9ca420090c8877784feaad03d3d9d 134 SUPERFAMILY SSF160419 3 127 4.97E-43 T 09-03-2017 IPR009833 Uncharacterised protein DUF1398 RG43_RS14815 b6d9ca420090c8877784feaad03d3d9d 134 Gene3D G3DSA:3.30.1810.10 1 127 8.9E-54 T 09-03-2017 IPR009833 Uncharacterised protein DUF1398 RG43_RS14815 b6d9ca420090c8877784feaad03d3d9d 134 Pfam PF07166 Protein of unknown function (DUF1398) 8 125 5.5E-45 T 09-03-2017 IPR009833 Uncharacterised protein DUF1398 RG43_RS14815 b6d9ca420090c8877784feaad03d3d9d 134 ProDom PD021249 YDFO YCGX ENVELOPE CYTOPLASMIC STY1988 CP-933X ECS1626 YBCV PROPHAGE 1 127 9.0E-71 T 09-03-2017 IPR009833 Uncharacterised protein DUF1398 RG43_RS24100 d3ecd7ac08fb4eee209577fac854ea67 319 SUPERFAMILY SSF110997 244 314 3.66E-20 T 09-03-2017 IPR007730 Sporulation-related domain GO:0042834 RG43_RS24100 d3ecd7ac08fb4eee209577fac854ea67 319 Pfam PF05036 Sporulation related domain 246 313 1.3E-16 T 09-03-2017 IPR007730 Sporulation-related domain GO:0042834 RG43_RS24100 d3ecd7ac08fb4eee209577fac854ea67 319 TIGRFAM TIGR02223 ftsN: cell division protein FtsN 2 315 2.8E-115 T 09-03-2017 IPR011930 Cell division protein FtsN GO:0005515 RG43_RS24100 d3ecd7ac08fb4eee209577fac854ea67 319 Gene3D G3DSA:3.30.70.1070 241 316 3.6E-32 T 09-03-2017 IPR007730 Sporulation-related domain GO:0042834 RG43_RS24100 d3ecd7ac08fb4eee209577fac854ea67 319 Hamap MF_02039 Cell division protein FtsN [ftsN]. 36 319 34.449 T 09-03-2017 IPR011930 Cell division protein FtsN GO:0005515 RG43_RS10520 89eb0fdbd1eb740bf315437c00815a52 1137 Pfam PF07484 Phage Tail Collar Domain 907 953 5.9E-11 T 09-03-2017 IPR011083 Phage tail collar domain RG43_RS10520 89eb0fdbd1eb740bf315437c00815a52 1137 Gene3D G3DSA:3.90.1340.10 898 956 3.2E-9 T 09-03-2017 IPR011083 Phage tail collar domain RG43_RS10520 89eb0fdbd1eb740bf315437c00815a52 1137 Pfam PF08400 Prophage tail fibre N-terminal 1 134 3.4E-72 T 09-03-2017 IPR013609 Bacteriophage 933W, L0121, tail fibre, N-terminal RG43_RS10520 89eb0fdbd1eb740bf315437c00815a52 1137 SUPERFAMILY SSF49464 4 80 6.28E-6 T 09-03-2017 IPR008969 Carboxypeptidase-like, regulatory domain RG43_RS10520 89eb0fdbd1eb740bf315437c00815a52 1137 Pfam PF03335 Phage tail fibre repeat 1096 1107 0.95 T 09-03-2017 IPR005003 Bacteriophage lambda, Stf, side tail fibre-repeat-1 GO:0005198 RG43_RS10520 89eb0fdbd1eb740bf315437c00815a52 1137 Pfam PF03335 Phage tail fibre repeat 1087 1098 2.2 T 09-03-2017 IPR005003 Bacteriophage lambda, Stf, side tail fibre-repeat-1 GO:0005198 RG43_RS10520 89eb0fdbd1eb740bf315437c00815a52 1137 Pfam PF03335 Phage tail fibre repeat 1002 1015 0.028 T 09-03-2017 IPR005003 Bacteriophage lambda, Stf, side tail fibre-repeat-1 GO:0005198 RG43_RS10520 89eb0fdbd1eb740bf315437c00815a52 1137 Pfam PF03335 Phage tail fibre repeat 1073 1085 0.045 T 09-03-2017 IPR005003 Bacteriophage lambda, Stf, side tail fibre-repeat-1 GO:0005198 RG43_RS10520 89eb0fdbd1eb740bf315437c00815a52 1137 Pfam PF03335 Phage tail fibre repeat 970 983 0.31 T 09-03-2017 IPR005003 Bacteriophage lambda, Stf, side tail fibre-repeat-1 GO:0005198 RG43_RS10520 89eb0fdbd1eb740bf315437c00815a52 1137 Pfam PF03335 Phage tail fibre repeat 1016 1024 29.0 T 09-03-2017 IPR005003 Bacteriophage lambda, Stf, side tail fibre-repeat-1 GO:0005198 RG43_RS10520 89eb0fdbd1eb740bf315437c00815a52 1137 SUPERFAMILY SSF88874 897 1030 3.92E-29 T 09-03-2017 RG43_RS10520 89eb0fdbd1eb740bf315437c00815a52 1137 Gene3D G3DSA:2.60.40.1120 4 81 5.9E-7 T 09-03-2017 IPR014766 Carboxypeptidase, regulatory domain RG43_RS10520 89eb0fdbd1eb740bf315437c00815a52 1137 SUPERFAMILY SSF88874 1063 1136 3.92E-7 T 09-03-2017 RG43_RS05690 136aa8874e9cc600318e3fd7b2e1ba97 545 Pfam PF06812 ImpA, N-terminal, type VI secretion system 43 147 2.5E-18 T 09-03-2017 IPR010657 ImpA, N-terminal RG43_RS05690 136aa8874e9cc600318e3fd7b2e1ba97 545 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 235 498 1.1E-85 T 09-03-2017 IPR017739 Type VI secretion system-associated, VCA0119 RG43_RS05690 136aa8874e9cc600318e3fd7b2e1ba97 545 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 38 499 6.5E-142 T 09-03-2017 IPR017739 Type VI secretion system-associated, VCA0119 RG43_RS20700 fb8c2814f376b032973534386ddd20a2 474 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 40 472 8.6E-168 T 09-03-2017 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 RG43_RS20700 fb8c2814f376b032973534386ddd20a2 474 SUPERFAMILY SSF50494 7 59 1.97E-64 T 09-03-2017 IPR009003 Peptidase S1, PA clan RG43_RS20700 fb8c2814f376b032973534386ddd20a2 474 SUPERFAMILY SSF50494 111 298 1.97E-64 T 09-03-2017 IPR009003 Peptidase S1, PA clan RG43_RS20700 fb8c2814f376b032973534386ddd20a2 474 Gene3D G3DSA:2.40.10.10 38 178 2.3E-36 T 09-03-2017 RG43_RS20700 fb8c2814f376b032973534386ddd20a2 474 SUPERFAMILY SSF50156 399 471 2.76E-16 T 09-03-2017 IPR001478 PDZ domain GO:0005515 RG43_RS20700 fb8c2814f376b032973534386ddd20a2 474 Gene3D G3DSA:2.30.42.10 291 388 3.4E-29 T 09-03-2017 IPR001478 PDZ domain GO:0005515 RG43_RS20700 fb8c2814f376b032973534386ddd20a2 474 SMART SM00228 289 371 9.7E-15 T 09-03-2017 IPR001478 PDZ domain GO:0005515 RG43_RS20700 fb8c2814f376b032973534386ddd20a2 474 SMART SM00228 396 466 1.5E-9 T 09-03-2017 IPR001478 PDZ domain GO:0005515 RG43_RS20700 fb8c2814f376b032973534386ddd20a2 474 Gene3D G3DSA:2.30.42.10 406 471 3.0E-20 T 09-03-2017 IPR001478 PDZ domain GO:0005515 RG43_RS20700 fb8c2814f376b032973534386ddd20a2 474 Pfam PF13365 Trypsin-like peptidase domain 114 250 1.5E-32 T 09-03-2017 RG43_RS20700 fb8c2814f376b032973534386ddd20a2 474 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 393 463 3.6E-12 T 09-03-2017 IPR001478 PDZ domain GO:0005515 RG43_RS20700 fb8c2814f376b032973534386ddd20a2 474 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 287 367 2.5E-15 T 09-03-2017 IPR001478 PDZ domain GO:0005515 RG43_RS20700 fb8c2814f376b032973534386ddd20a2 474 PRINTS PR00834 HtrA/DegQ protease family signature 145 165 2.6E-60 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RG43_RS20700 fb8c2814f376b032973534386ddd20a2 474 PRINTS PR00834 HtrA/DegQ protease family signature 186 210 2.6E-60 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RG43_RS20700 fb8c2814f376b032973534386ddd20a2 474 PRINTS PR00834 HtrA/DegQ protease family signature 124 136 2.6E-60 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RG43_RS20700 fb8c2814f376b032973534386ddd20a2 474 PRINTS PR00834 HtrA/DegQ protease family signature 221 238 2.6E-60 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RG43_RS20700 fb8c2814f376b032973534386ddd20a2 474 PRINTS PR00834 HtrA/DegQ protease family signature 243 260 2.6E-60 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RG43_RS20700 fb8c2814f376b032973534386ddd20a2 474 PRINTS PR00834 HtrA/DegQ protease family signature 329 341 2.6E-60 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RG43_RS20700 fb8c2814f376b032973534386ddd20a2 474 Gene3D G3DSA:2.40.10.10 179 290 2.2E-44 T 09-03-2017 RG43_RS20700 fb8c2814f376b032973534386ddd20a2 474 SUPERFAMILY SSF50156 271 379 1.26E-22 T 09-03-2017 IPR001478 PDZ domain GO:0005515 RG43_RS22505 32db77dafcb2b4bb72dcbe9329a202fe 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 25.632 T 09-03-2017 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS22505 32db77dafcb2b4bb72dcbe9329a202fe 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 45 2.1E-22 T 09-03-2017 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS22505 32db77dafcb2b4bb72dcbe9329a202fe 149 SUPERFAMILY SSF55653 60 149 1.07E-25 T 09-03-2017 IPR020069 Ribosomal protein L9, C-terminal RG43_RS22505 32db77dafcb2b4bb72dcbe9329a202fe 149 SUPERFAMILY SSF55658 1 57 3.31E-19 T 09-03-2017 IPR009027 Ribosomal protein L9/RNase H1, N-terminal RG43_RS22505 32db77dafcb2b4bb72dcbe9329a202fe 149 Gene3D G3DSA:3.40.5.10 1 52 1.5E-25 T 09-03-2017 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS22505 32db77dafcb2b4bb72dcbe9329a202fe 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 2.3E-25 T 09-03-2017 IPR020069 Ribosomal protein L9, C-terminal RG43_RS22505 32db77dafcb2b4bb72dcbe9329a202fe 149 Gene3D G3DSA:3.10.430.100 61 149 1.7E-28 T 09-03-2017 IPR020069 Ribosomal protein L9, C-terminal RG43_RS22505 32db77dafcb2b4bb72dcbe9329a202fe 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 09-03-2017 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS22505 32db77dafcb2b4bb72dcbe9329a202fe 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 1.8E-59 T 09-03-2017 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS19630 197f5d62ecbb69177074a499ace1198b 222 SUPERFAMILY SSF49354 20 114 5.49E-5 T 09-03-2017 IPR008962 PapD-like RG43_RS11700 fa47643db6d15b7747c86e2178a4695a 393 Pfam PF07690 Major Facilitator Superfamily 23 349 2.2E-18 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS11700 fa47643db6d15b7747c86e2178a4695a 393 Gene3D G3DSA:1.20.1250.20 207 388 3.2E-13 T 09-03-2017 RG43_RS11700 fa47643db6d15b7747c86e2178a4695a 393 Gene3D G3DSA:1.20.1250.20 14 192 6.9E-16 T 09-03-2017 RG43_RS11700 fa47643db6d15b7747c86e2178a4695a 393 SUPERFAMILY SSF103473 7 389 2.88E-44 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS11700 fa47643db6d15b7747c86e2178a4695a 393 TIGRFAM TIGR00896 CynX: cyanate transporter 15 368 2.3E-150 T 09-03-2017 IPR004747 Cyanate transport system protein GO:0016021 RG43_RS21610 5514a491e8915655d8f5b76bb4ee1647 555 SUPERFAMILY SSF52540 11 243 2.27E-49 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS21610 5514a491e8915655d8f5b76bb4ee1647 555 Gene3D G3DSA:3.40.50.300 11 109 7.6E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS21610 5514a491e8915655d8f5b76bb4ee1647 555 Gene3D G3DSA:3.40.50.300 141 286 7.6E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS21610 5514a491e8915655d8f5b76bb4ee1647 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 9.9E-296 T 09-03-2017 IPR022374 ABC transporter, ATP-binding protein, ChvD RG43_RS21610 5514a491e8915655d8f5b76bb4ee1647 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS21610 5514a491e8915655d8f5b76bb4ee1647 555 Pfam PF12848 ABC transporter 230 306 2.4E-11 T 09-03-2017 IPR032781 ABC-transporter extension domain RG43_RS21610 5514a491e8915655d8f5b76bb4ee1647 555 Pfam PF00005 ABC transporter 22 191 1.3E-32 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS21610 5514a491e8915655d8f5b76bb4ee1647 555 Pfam PF00005 ABC transporter 340 473 1.5E-24 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS21610 5514a491e8915655d8f5b76bb4ee1647 555 SMART SM00382 348 522 9.2E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS21610 5514a491e8915655d8f5b76bb4ee1647 555 SMART SM00382 31 236 3.5E-8 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS21610 5514a491e8915655d8f5b76bb4ee1647 555 Gene3D G3DSA:3.40.50.300 322 535 5.0E-46 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS21610 5514a491e8915655d8f5b76bb4ee1647 555 SUPERFAMILY SSF52540 302 526 4.99E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS03485 91073eb5c89e2b3d2591c17d86c53bfc 472 Gene3D G3DSA:1.20.1250.20 47 239 3.5E-44 T 09-03-2017 RG43_RS03485 91073eb5c89e2b3d2591c17d86c53bfc 472 Pfam PF07690 Major Facilitator Superfamily 56 327 1.5E-47 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS03485 91073eb5c89e2b3d2591c17d86c53bfc 472 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 57 451 2.5E-128 T 09-03-2017 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 RG43_RS03485 91073eb5c89e2b3d2591c17d86c53bfc 472 Gene3D G3DSA:1.20.1250.20 257 457 2.8E-21 T 09-03-2017 RG43_RS03485 91073eb5c89e2b3d2591c17d86c53bfc 472 SUPERFAMILY SSF103473 42 452 1.96E-81 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS24720 d23a7e8e9bdc957f0c6e9da818acf6f1 476 Pfam PF06097 Bacterial protein of unknown function (DUF945) 4 464 4.7E-95 T 09-03-2017 IPR010352 Protein of unknown function DUF945 RG43_RS18855 59473cc5528cc4a5cd579c211a8b4d8e 296 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 2 284 18.105 T 09-03-2017 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 RG43_RS18855 59473cc5528cc4a5cd579c211a8b4d8e 296 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 4 282 1.3E-91 T 09-03-2017 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 RG43_RS18855 59473cc5528cc4a5cd579c211a8b4d8e 296 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 57 79 - T 09-03-2017 IPR030470 UbiA prenyltransferase conserved site RG43_RS18855 59473cc5528cc4a5cd579c211a8b4d8e 296 Pfam PF01040 UbiA prenyltransferase family 19 265 1.3E-59 T 09-03-2017 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 RG43_RS08030 ed6776b2118f4f7bbef54dab07eaa5cd 428 Gene3D G3DSA:1.10.150.130 105 188 3.9E-7 T 09-03-2017 IPR023109 Integrase/recombinase, N-terminal RG43_RS08030 ed6776b2118f4f7bbef54dab07eaa5cd 428 Pfam PF13356 Domain of unknown function (DUF4102) 9 95 2.3E-21 T 09-03-2017 IPR025166 Domain of unknown function DUF4102 RG43_RS08030 ed6776b2118f4f7bbef54dab07eaa5cd 428 SUPERFAMILY SSF56349 105 399 9.42E-45 T 09-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RG43_RS08030 ed6776b2118f4f7bbef54dab07eaa5cd 428 Pfam PF00589 Phage integrase family 233 391 1.1E-16 T 09-03-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RG43_RS08030 ed6776b2118f4f7bbef54dab07eaa5cd 428 Gene3D G3DSA:1.10.443.10 219 392 2.1E-22 T 09-03-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RG43_RS05795 de932e898f4776101ae5b563fce85d5a 76 Gene3D G3DSA:2.30.30.100 21 76 7.1E-34 T 09-03-2017 RG43_RS05795 de932e898f4776101ae5b563fce85d5a 76 SUPERFAMILY SSF50182 24 74 5.07E-20 T 09-03-2017 IPR010920 LSM domain RG43_RS05795 de932e898f4776101ae5b563fce85d5a 76 Pfam PF06004 Bacterial protein of unknown function (DUF903) 25 73 2.1E-25 T 09-03-2017 IPR010305 Protein of unknown function DUF903 RG43_RS04965 626ec9e2ec0bc60f54eb8822b495b6f5 197 Pfam PF01725 Ham1 family 4 191 4.2E-56 T 09-03-2017 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206|Reactome: R-HSA-15869 RG43_RS04965 626ec9e2ec0bc60f54eb8822b495b6f5 197 Gene3D G3DSA:3.90.950.10 1 195 4.8E-84 T 09-03-2017 IPR029001 Inosine triphosphate pyrophosphatase-like RG43_RS04965 626ec9e2ec0bc60f54eb8822b495b6f5 197 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 194 2.9E-72 T 09-03-2017 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206|Reactome: R-HSA-15869 RG43_RS04965 626ec9e2ec0bc60f54eb8822b495b6f5 197 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 2 196 51.726 T 09-03-2017 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 RG43_RS04965 626ec9e2ec0bc60f54eb8822b495b6f5 197 SUPERFAMILY SSF52972 1 195 3.4E-75 T 09-03-2017 IPR029001 Inosine triphosphate pyrophosphatase-like RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 Gene3D G3DSA:3.30.1300.30 1425 1516 3.3E-34 T 09-03-2017 RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 SUPERFAMILY SSF101967 662 757 1.96E-5 T 09-03-2017 RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 Pfam PF05658 Head domain of trimeric autotransporter adhesin 297 321 9.2E-5 T 09-03-2017 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 Pfam PF05658 Head domain of trimeric autotransporter adhesin 128 154 3.5E-6 T 09-03-2017 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 Pfam PF05658 Head domain of trimeric autotransporter adhesin 198 224 1.5E-4 T 09-03-2017 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 Pfam PF05658 Head domain of trimeric autotransporter adhesin 255 279 1.2E-5 T 09-03-2017 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 Pfam PF05658 Head domain of trimeric autotransporter adhesin 1297 1323 3.5E-7 T 09-03-2017 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 Pfam PF05658 Head domain of trimeric autotransporter adhesin 91 110 4.7E-4 T 09-03-2017 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 Pfam PF05658 Head domain of trimeric autotransporter adhesin 999 1025 4.3E-7 T 09-03-2017 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 Pfam PF05658 Head domain of trimeric autotransporter adhesin 1159 1185 4.5E-4 T 09-03-2017 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 Pfam PF05658 Head domain of trimeric autotransporter adhesin 1311 1335 3.4E-4 T 09-03-2017 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 Pfam PF03895 YadA-like C-terminal region 1440 1516 3.5E-24 T 09-03-2017 IPR005594 YadA-like, C-terminal RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1219 1239 2.7E-10 T 09-03-2017 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 833 854 2.4E-6 T 09-03-2017 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 474 495 3.1E-7 T 09-03-2017 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 549 571 9.4E-9 T 09-03-2017 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1083 1103 1.5E-6 T 09-03-2017 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1340 1360 1.2E-9 T 09-03-2017 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 628 650 3.6E-7 T 09-03-2017 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 733 754 2.9E-7 T 09-03-2017 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 928 949 1.9E-8 T 09-03-2017 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 380 403 1.2E-8 T 09-03-2017 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 SUPERFAMILY SSF101967 1285 1362 2.88E-17 T 09-03-2017 RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 SUPERFAMILY SSF101967 1123 1240 9.68E-24 T 09-03-2017 RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 SUPERFAMILY SSF101967 1379 1415 8.5E-6 T 09-03-2017 RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 SUPERFAMILY SSF101967 981 1106 1.96E-16 T 09-03-2017 RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 SUPERFAMILY SSF54523 1353 1360 1.57E-25 T 09-03-2017 RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 SUPERFAMILY SSF54523 1425 1516 1.57E-25 T 09-03-2017 RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 SUPERFAMILY SSF101967 163 293 2.48E-21 T 09-03-2017 RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 SUPERFAMILY SSF101967 68 182 4.58E-19 T 09-03-2017 RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 SUPERFAMILY SSF101967 582 654 3.01E-5 T 09-03-2017 RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 24 9.6E-9 T 09-03-2017 IPR024973 ESPR domain RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 Gene3D G3DSA:1.20.5.170 940 990 1.3E-8 T 09-03-2017 RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 Gene3D G3DSA:1.20.5.170 1229 1280 5.8E-11 T 09-03-2017 RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 Gene3D G3DSA:1.20.5.170 469 523 2.8E-8 T 09-03-2017 RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 Gene3D G3DSA:1.20.5.170 545 601 3.5E-11 T 09-03-2017 RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 Gene3D G3DSA:1.20.5.170 393 462 5.4E-5 T 09-03-2017 RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 Gene3D G3DSA:2.150.10.10 602 654 1.9E-5 T 09-03-2017 IPR011049 Serralysin-like metalloprotease, C-terminal RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 Gene3D G3DSA:2.150.10.10 222 392 1.0E-43 T 09-03-2017 IPR011049 Serralysin-like metalloprotease, C-terminal RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 Gene3D G3DSA:2.150.10.10 681 757 4.9E-5 T 09-03-2017 IPR011049 Serralysin-like metalloprotease, C-terminal RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 Gene3D G3DSA:2.150.10.10 795 857 1.3E-4 T 09-03-2017 IPR011049 Serralysin-like metalloprotease, C-terminal RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 Gene3D G3DSA:2.150.10.10 1292 1362 3.0E-23 T 09-03-2017 IPR011049 Serralysin-like metalloprotease, C-terminal RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 Gene3D G3DSA:2.150.10.10 991 1105 5.3E-18 T 09-03-2017 IPR011049 Serralysin-like metalloprotease, C-terminal RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 Gene3D G3DSA:2.150.10.10 1386 1417 2.7E-4 T 09-03-2017 IPR011049 Serralysin-like metalloprotease, C-terminal RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 Gene3D G3DSA:2.150.10.10 864 939 4.3E-5 T 09-03-2017 IPR011049 Serralysin-like metalloprotease, C-terminal RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 Gene3D G3DSA:2.150.10.10 68 221 3.3E-29 T 09-03-2017 IPR011049 Serralysin-like metalloprotease, C-terminal RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 Gene3D G3DSA:2.150.10.10 1123 1228 1.3E-20 T 09-03-2017 IPR011049 Serralysin-like metalloprotease, C-terminal RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 SUPERFAMILY SSF101967 767 952 2.75E-8 T 09-03-2017 RG43_RS00710 8190f84eede12b46386dcbb2b2fe3b59 1516 SUPERFAMILY SSF101967 256 406 9.68E-30 T 09-03-2017 RG43_RS19435 98b8ecb836bba0f49d09925585bb3993 165 Pfam PF06496 Protein of unknown function (DUF1097) 9 152 5.9E-27 T 09-03-2017 IPR009476 Protein of unknown function DUF1097 RG43_RS06640 2fb521dd9fc19ae36de23d7d251b3be6 197 SUPERFAMILY SSF51064 139 195 1.83E-16 T 09-03-2017 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 RG43_RS06640 2fb521dd9fc19ae36de23d7d251b3be6 197 Gene3D G3DSA:2.30.22.10 138 196 7.3E-24 T 09-03-2017 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 RG43_RS06640 2fb521dd9fc19ae36de23d7d251b3be6 197 Gene3D G3DSA:3.90.20.20 34 137 1.7E-32 T 09-03-2017 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 RG43_RS06640 2fb521dd9fc19ae36de23d7d251b3be6 197 Pfam PF01025 GrpE 35 194 7.9E-47 T 09-03-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 RG43_RS06640 2fb521dd9fc19ae36de23d7d251b3be6 197 Hamap MF_01151 Protein GrpE [grpE]. 4 194 20.631 T 09-03-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 RG43_RS06640 2fb521dd9fc19ae36de23d7d251b3be6 197 SUPERFAMILY SSF58014 42 138 1.57E-26 T 09-03-2017 RG43_RS06640 2fb521dd9fc19ae36de23d7d251b3be6 197 ProSitePatterns PS01071 grpE protein signature. 149 192 - T 09-03-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 RG43_RS06640 2fb521dd9fc19ae36de23d7d251b3be6 197 PRINTS PR00773 GrpE protein signature 173 192 1.3E-25 T 09-03-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 RG43_RS06640 2fb521dd9fc19ae36de23d7d251b3be6 197 PRINTS PR00773 GrpE protein signature 63 79 1.3E-25 T 09-03-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 RG43_RS06640 2fb521dd9fc19ae36de23d7d251b3be6 197 PRINTS PR00773 GrpE protein signature 146 161 1.3E-25 T 09-03-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 RG43_RS06640 2fb521dd9fc19ae36de23d7d251b3be6 197 PRINTS PR00773 GrpE protein signature 91 106 1.3E-25 T 09-03-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 RG43_RS18915 f0d80bc2f29b858bc7c4bdf0c6eea409 139 Pfam PF01029 NusB family 7 131 5.0E-35 T 09-03-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RG43_RS18915 f0d80bc2f29b858bc7c4bdf0c6eea409 139 Gene3D G3DSA:1.10.940.10 3 135 7.1E-45 T 09-03-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RG43_RS18915 f0d80bc2f29b858bc7c4bdf0c6eea409 139 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 6 131 4.1E-45 T 09-03-2017 IPR011605 NusB antitermination factor GO:0006353 RG43_RS18915 f0d80bc2f29b858bc7c4bdf0c6eea409 139 SUPERFAMILY SSF48013 3 134 3.01E-42 T 09-03-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RG43_RS18915 f0d80bc2f29b858bc7c4bdf0c6eea409 139 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 4 135 23.546 T 09-03-2017 IPR011605 NusB antitermination factor GO:0006353 RG43_RS05460 aa13093e7d4fe499f120e2bf16ec4fd4 250 SUPERFAMILY SSF51261 41 241 7.32E-48 T 09-03-2017 IPR011055 Duplicated hybrid motif RG43_RS05460 aa13093e7d4fe499f120e2bf16ec4fd4 250 Pfam PF01551 Peptidase family M23 144 237 2.1E-31 T 09-03-2017 IPR016047 Peptidase M23 RG43_RS05460 aa13093e7d4fe499f120e2bf16ec4fd4 250 Pfam PF01476 LysM domain 42 84 4.6E-14 T 09-03-2017 IPR018392 LysM domain RG43_RS05460 aa13093e7d4fe499f120e2bf16ec4fd4 250 SMART SM00257 41 85 2.7E-16 T 09-03-2017 IPR018392 LysM domain RG43_RS05460 aa13093e7d4fe499f120e2bf16ec4fd4 250 Gene3D G3DSA:2.70.70.10 103 242 8.9E-40 T 09-03-2017 RG43_RS05460 aa13093e7d4fe499f120e2bf16ec4fd4 250 Gene3D G3DSA:3.10.350.10 40 84 1.7E-17 T 09-03-2017 IPR018392 LysM domain RG43_RS21860 cdffb142986a47b619dca2d72425b7c0 406 SMART SM01119 295 393 2.0E-32 T 09-03-2017 IPR026956 D-serine dehydratase-like domain RG43_RS21860 cdffb142986a47b619dca2d72425b7c0 406 Pfam PF14031 Putative serine dehydratase domain 295 390 4.7E-14 T 09-03-2017 IPR026956 D-serine dehydratase-like domain RG43_RS21860 cdffb142986a47b619dca2d72425b7c0 406 SUPERFAMILY SSF51419 34 271 3.14E-31 T 09-03-2017 IPR029066 PLP-binding barrel RG43_RS21860 cdffb142986a47b619dca2d72425b7c0 406 Gene3D G3DSA:3.20.20.10 34 217 5.1E-15 T 09-03-2017 IPR029066 PLP-binding barrel RG43_RS21860 cdffb142986a47b619dca2d72425b7c0 406 Pfam PF01168 Alanine racemase, N-terminal domain 34 214 8.7E-16 T 09-03-2017 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RG43_RS07335 b66747bd93de44cf7bd67d9c113dc5ef 487 Pfam PF14559 Tetratricopeptide repeat 354 418 1.4E-10 T 09-03-2017 RG43_RS07335 b66747bd93de44cf7bd67d9c113dc5ef 487 Pfam PF01435 Peptidase family M48 72 259 3.8E-26 T 09-03-2017 IPR001915 Peptidase M48 GO:0004222|GO:0006508 RG43_RS07335 b66747bd93de44cf7bd67d9c113dc5ef 487 Gene3D G3DSA:1.25.40.10 310 453 9.9E-15 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS07335 b66747bd93de44cf7bd67d9c113dc5ef 487 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 4 484 42.608 T 09-03-2017 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 RG43_RS07335 b66747bd93de44cf7bd67d9c113dc5ef 487 Gene3D G3DSA:3.30.2010.10 68 150 1.3E-15 T 09-03-2017 RG43_RS07335 b66747bd93de44cf7bd67d9c113dc5ef 487 SUPERFAMILY SSF48452 313 428 7.05E-9 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS12505 14753f47f5ab054cc62ad7aeb8f9820d 352 Hamap MF_00462 Electron transport complex subunit RsxD [rsxD]. 3 350 28.933 T 09-03-2017 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 RG43_RS12505 14753f47f5ab054cc62ad7aeb8f9820d 352 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 349 1.6E-150 T 09-03-2017 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 RG43_RS12505 14753f47f5ab054cc62ad7aeb8f9820d 352 Pfam PF03116 NQR2, RnfD, RnfE family 6 348 1.2E-108 T 09-03-2017 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 RG43_RS07185 73cf79dad8bc21fd8c65de28036a0ca3 143 SMART SM00562 3 140 5.3E-86 T 09-03-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RG43_RS07185 73cf79dad8bc21fd8c65de28036a0ca3 143 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 34.662 T 09-03-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RG43_RS07185 73cf79dad8bc21fd8c65de28036a0ca3 143 SUPERFAMILY SSF54919 1 141 3.8E-58 T 09-03-2017 RG43_RS07185 73cf79dad8bc21fd8c65de28036a0ca3 143 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 09-03-2017 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RG43_RS07185 73cf79dad8bc21fd8c65de28036a0ca3 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 4.5E-40 T 09-03-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RG43_RS07185 73cf79dad8bc21fd8c65de28036a0ca3 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 4.5E-40 T 09-03-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RG43_RS07185 73cf79dad8bc21fd8c65de28036a0ca3 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 4.5E-40 T 09-03-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RG43_RS07185 73cf79dad8bc21fd8c65de28036a0ca3 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 4.5E-40 T 09-03-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RG43_RS07185 73cf79dad8bc21fd8c65de28036a0ca3 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 4.5E-40 T 09-03-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RG43_RS07185 73cf79dad8bc21fd8c65de28036a0ca3 143 Pfam PF00334 Nucleoside diphosphate kinase 4 137 7.1E-54 T 09-03-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RG43_RS07185 73cf79dad8bc21fd8c65de28036a0ca3 143 Gene3D G3DSA:3.30.70.141 1 140 1.5E-58 T 09-03-2017 RG43_RS13000 40052261ead2da05e544605c317ae147 74 Gene3D G3DSA:1.10.10.60 27 69 1.2E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS13000 40052261ead2da05e544605c317ae147 74 SUPERFAMILY SSF46689 27 70 7.62E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS13000 40052261ead2da05e544605c317ae147 74 Pfam PF12833 Helix-turn-helix domain 2 70 2.6E-20 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS13000 40052261ead2da05e544605c317ae147 74 SMART SM00342 1 72 3.7E-10 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS13000 40052261ead2da05e544605c317ae147 74 Gene3D G3DSA:1.10.10.60 4 25 5.4E-4 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS12815 617904eddc49cdf8930dc1373e04beef 248 SUPERFAMILY SSF51735 2 231 1.14E-61 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS12815 617904eddc49cdf8930dc1373e04beef 248 Pfam PF00106 short chain dehydrogenase 2 187 1.3E-53 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS12815 617904eddc49cdf8930dc1373e04beef 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RG43_RS12815 617904eddc49cdf8930dc1373e04beef 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 1.9E-8 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS12815 617904eddc49cdf8930dc1373e04beef 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 1.9E-8 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS12815 617904eddc49cdf8930dc1373e04beef 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 1.9E-8 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS12815 617904eddc49cdf8930dc1373e04beef 248 Gene3D G3DSA:3.40.50.720 2 232 3.8E-63 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS12815 617904eddc49cdf8930dc1373e04beef 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 1.1E-19 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS12815 617904eddc49cdf8930dc1373e04beef 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 1.1E-19 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS12815 617904eddc49cdf8930dc1373e04beef 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 1.1E-19 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS12815 617904eddc49cdf8930dc1373e04beef 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 1.1E-19 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS12815 617904eddc49cdf8930dc1373e04beef 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 1.1E-19 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS07770 e2452d2baea8139d65fd2460832d4c36 729 SMART SM00267 315 473 7.6E-26 T 09-03-2017 IPR000160 GGDEF domain RG43_RS07770 e2452d2baea8139d65fd2460832d4c36 729 Pfam PF00563 EAL domain 493 724 3.5E-59 T 09-03-2017 IPR001633 EAL domain RG43_RS07770 e2452d2baea8139d65fd2460832d4c36 729 Gene3D G3DSA:3.20.20.450 493 728 2.4E-64 T 09-03-2017 IPR001633 EAL domain RG43_RS07770 e2452d2baea8139d65fd2460832d4c36 729 Pfam PF05231 MASE1 16 314 1.1E-58 T 09-03-2017 IPR007895 MASE1 RG43_RS07770 e2452d2baea8139d65fd2460832d4c36 729 SMART SM00052 487 729 1.4E-96 T 09-03-2017 IPR001633 EAL domain RG43_RS07770 e2452d2baea8139d65fd2460832d4c36 729 SUPERFAMILY SSF55073 331 436 3.69E-5 T 09-03-2017 IPR029787 Nucleotide cyclase RG43_RS07770 e2452d2baea8139d65fd2460832d4c36 729 SUPERFAMILY SSF141868 493 728 3.27E-66 T 09-03-2017 IPR001633 EAL domain RG43_RS05565 ceb368ce08c50f28a1e7758f00e86ce0 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 420 707 5.1E-110 T 09-03-2017 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 RG43_RS05565 ceb368ce08c50f28a1e7758f00e86ce0 748 SUPERFAMILY SSF52009 293 413 1.57E-25 T 09-03-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RG43_RS05565 ceb368ce08c50f28a1e7758f00e86ce0 748 Gene3D G3DSA:3.30.450.40 1 160 1.1E-46 T 09-03-2017 IPR029016 GAF domain-like RG43_RS05565 ceb368ce08c50f28a1e7758f00e86ce0 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 175 729 2.3E-125 T 09-03-2017 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 RG43_RS05565 ceb368ce08c50f28a1e7758f00e86ce0 748 SUPERFAMILY SSF47831 197 309 3.92E-26 T 09-03-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RG43_RS05565 ceb368ce08c50f28a1e7758f00e86ce0 748 SUPERFAMILY SSF55781 2 159 3.27E-30 T 09-03-2017 IPR029016 GAF domain-like RG43_RS05565 ceb368ce08c50f28a1e7758f00e86ce0 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 666 678 2.1E-24 T 09-03-2017 RG43_RS05565 ceb368ce08c50f28a1e7758f00e86ce0 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 2.1E-24 T 09-03-2017 RG43_RS05565 ceb368ce08c50f28a1e7758f00e86ce0 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 613 628 2.1E-24 T 09-03-2017 RG43_RS05565 ceb368ce08c50f28a1e7758f00e86ce0 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 630 645 2.1E-24 T 09-03-2017 RG43_RS05565 ceb368ce08c50f28a1e7758f00e86ce0 748 Gene3D G3DSA:3.20.20.60 420 736 1.3E-100 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RG43_RS05565 ceb368ce08c50f28a1e7758f00e86ce0 748 SUPERFAMILY SSF51621 419 715 4.71E-97 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RG43_RS05565 ceb368ce08c50f28a1e7758f00e86ce0 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 613 631 - T 09-03-2017 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 RG43_RS05565 ceb368ce08c50f28a1e7758f00e86ce0 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 320 391 1.7E-15 T 09-03-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RG43_RS05565 ceb368ce08c50f28a1e7758f00e86ce0 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 174 294 1.1E-23 T 09-03-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RG43_RS05565 ceb368ce08c50f28a1e7758f00e86ce0 748 SMART SM00065 17 164 8.2E-29 T 09-03-2017 IPR003018 GAF domain GO:0005515 RG43_RS05565 ceb368ce08c50f28a1e7758f00e86ce0 748 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 351 362 - T 09-03-2017 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 RG43_RS05565 ceb368ce08c50f28a1e7758f00e86ce0 748 Gene3D G3DSA:3.50.30.10 301 414 8.3E-30 T 09-03-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RG43_RS05565 ceb368ce08c50f28a1e7758f00e86ce0 748 Gene3D G3DSA:1.10.274.10 197 300 1.0E-33 T 09-03-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RG43_RS05565 ceb368ce08c50f28a1e7758f00e86ce0 748 Pfam PF01590 GAF domain 18 152 1.0E-14 T 09-03-2017 IPR003018 GAF domain GO:0005515 RG43_RS21100 6bd4cf4b12f6cf12bd03d0426613a17e 438 SUPERFAMILY SSF53244 299 437 8.93E-55 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 RG43_RS21100 6bd4cf4b12f6cf12bd03d0426613a17e 438 Gene3D G3DSA:3.90.190.20 300 433 4.3E-45 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 RG43_RS21100 6bd4cf4b12f6cf12bd03d0426613a17e 438 Pfam PF02875 Mur ligase family, glutamate ligase domain 301 373 1.8E-10 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 RG43_RS21100 6bd4cf4b12f6cf12bd03d0426613a17e 438 Pfam PF08245 Mur ligase middle domain 110 280 3.4E-29 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RG43_RS21100 6bd4cf4b12f6cf12bd03d0426613a17e 438 SUPERFAMILY SSF53623 95 297 5.89E-58 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RG43_RS21100 6bd4cf4b12f6cf12bd03d0426613a17e 438 SUPERFAMILY SSF51984 3 94 7.98E-25 T 09-03-2017 RG43_RS21100 6bd4cf4b12f6cf12bd03d0426613a17e 438 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 7 437 35.196 T 09-03-2017 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RG43_RS21100 6bd4cf4b12f6cf12bd03d0426613a17e 438 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 8 435 8.9E-131 T 09-03-2017 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RG43_RS21100 6bd4cf4b12f6cf12bd03d0426613a17e 438 Gene3D G3DSA:3.40.1190.10 94 299 1.8E-68 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RG43_RS21100 6bd4cf4b12f6cf12bd03d0426613a17e 438 Gene3D G3DSA:3.40.50.720 3 92 2.1E-27 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS16615 65222ec89da5e3c9a0b445d5727bf68b 338 Pfam PF05971 Protein of unknown function (DUF890) 33 326 4.8E-154 T 09-03-2017 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 RG43_RS16615 65222ec89da5e3c9a0b445d5727bf68b 338 SUPERFAMILY SSF53335 73 326 1.05E-28 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS16615 65222ec89da5e3c9a0b445d5727bf68b 338 PIRSF PIRSF029038 25 338 1.5E-149 T 09-03-2017 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 RG43_RS16615 65222ec89da5e3c9a0b445d5727bf68b 338 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 35 328 53.717 T 09-03-2017 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 RG43_RS16615 65222ec89da5e3c9a0b445d5727bf68b 338 Gene3D G3DSA:3.40.50.150 119 302 5.2E-9 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS22760 052ebfac67626ca0f2c49ed489e6a56a 244 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 09-03-2017 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 RG43_RS22760 052ebfac67626ca0f2c49ed489e6a56a 244 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 8 111 3.0E-31 T 09-03-2017 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 RG43_RS22760 052ebfac67626ca0f2c49ed489e6a56a 244 Gene3D G3DSA:1.10.1060.10 107 231 6.2E-37 T 09-03-2017 RG43_RS22760 052ebfac67626ca0f2c49ed489e6a56a 244 SUPERFAMILY SSF54292 4 106 7.27E-29 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RG43_RS22760 052ebfac67626ca0f2c49ed489e6a56a 244 Gene3D G3DSA:3.10.20.30 2 106 3.3E-33 T 09-03-2017 IPR012675 Beta-grasp domain RG43_RS22760 052ebfac67626ca0f2c49ed489e6a56a 244 Pfam PF13183 4Fe-4S dicluster domain 146 219 7.6E-12 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS22760 052ebfac67626ca0f2c49ed489e6a56a 244 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS22760 052ebfac67626ca0f2c49ed489e6a56a 244 SUPERFAMILY SSF46548 107 229 1.92E-31 T 09-03-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 RG43_RS22760 052ebfac67626ca0f2c49ed489e6a56a 244 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 4.9E-99 T 09-03-2017 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 RG43_RS16840 e6c755206eb07092d4c4590ad68de5e9 199 SUPERFAMILY SSF56925 31 199 3.4E-28 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RG43_RS16840 e6c755206eb07092d4c4590ad68de5e9 199 ProSitePatterns PS00694 Enterobacterial virulence outer membrane protein signature 1. 50 58 - T 09-03-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 RG43_RS16840 e6c755206eb07092d4c4590ad68de5e9 199 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 191 199 - T 09-03-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 RG43_RS16840 e6c755206eb07092d4c4590ad68de5e9 199 Gene3D G3DSA:2.40.160.20 28 199 2.4E-48 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RG43_RS16840 e6c755206eb07092d4c4590ad68de5e9 199 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 187 198 6.9E-29 T 09-03-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 RG43_RS16840 e6c755206eb07092d4c4590ad68de5e9 199 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 96 119 6.9E-29 T 09-03-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 RG43_RS16840 e6c755206eb07092d4c4590ad68de5e9 199 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 160 181 6.9E-29 T 09-03-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 RG43_RS16840 e6c755206eb07092d4c4590ad68de5e9 199 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 49 61 6.9E-29 T 09-03-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 RG43_RS16840 e6c755206eb07092d4c4590ad68de5e9 199 Pfam PF06316 Enterobacterial Ail/Lom protein 1 199 1.4E-121 T 09-03-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 RG43_RS06895 2fccd1e1f3386a89238f3efe7376897d 301 Gene3D G3DSA:3.30.300.20 194 294 2.7E-40 T 09-03-2017 IPR015946 K homology domain-like, alpha/beta RG43_RS06895 2fccd1e1f3386a89238f3efe7376897d 301 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 170 1.3E-41 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 RG43_RS06895 2fccd1e1f3386a89238f3efe7376897d 301 SUPERFAMILY SSF54814 182 297 1.96E-40 T 09-03-2017 IPR009019 K homology domain, prokaryotic type GO:0003723 RG43_RS06895 2fccd1e1f3386a89238f3efe7376897d 301 Gene3D G3DSA:3.40.50.300 10 193 2.9E-43 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS06895 2fccd1e1f3386a89238f3efe7376897d 301 Pfam PF07650 KH domain 209 285 2.0E-19 T 09-03-2017 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS06895 2fccd1e1f3386a89238f3efe7376897d 301 SUPERFAMILY SSF52540 11 205 1.57E-43 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS06895 2fccd1e1f3386a89238f3efe7376897d 301 Hamap MF_00367 GTPase Era [era]. 6 297 35.354 T 09-03-2017 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 RG43_RS06895 2fccd1e1f3386a89238f3efe7376897d 301 Pfam PF01926 50S ribosome-binding GTPase 11 125 1.2E-23 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 RG43_RS06895 2fccd1e1f3386a89238f3efe7376897d 301 TIGRFAM TIGR00436 era: GTP-binding protein Era 9 280 1.5E-120 T 09-03-2017 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 RG43_RS25265 408a5fdd49f800e6c52216e2c6a47425 491 Gene3D G3DSA:1.10.1040.10 361 481 6.1E-16 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RG43_RS25265 408a5fdd49f800e6c52216e2c6a47425 491 Gene3D G3DSA:3.40.50.720 1 201 2.7E-76 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS25265 408a5fdd49f800e6c52216e2c6a47425 491 SUPERFAMILY SSF51735 30 209 6.23E-58 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS25265 408a5fdd49f800e6c52216e2c6a47425 491 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 22 485 38.836 T 09-03-2017 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 RG43_RS25265 408a5fdd49f800e6c52216e2c6a47425 491 SUPERFAMILY SSF48179 210 369 6.8E-42 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RG43_RS25265 408a5fdd49f800e6c52216e2c6a47425 491 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 368 1.0E-137 T 09-03-2017 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 RG43_RS25265 408a5fdd49f800e6c52216e2c6a47425 491 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 1.7E-58 T 09-03-2017 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 RG43_RS25265 408a5fdd49f800e6c52216e2c6a47425 491 SUPERFAMILY SSF48179 349 484 2.89E-40 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RG43_RS25265 408a5fdd49f800e6c52216e2c6a47425 491 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 357 482 1.3E-21 T 09-03-2017 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 RG43_RS25265 408a5fdd49f800e6c52216e2c6a47425 491 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 342 1.4E-28 T 09-03-2017 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 RG43_RS09485 f95a85b4608bb166abca1f9e08cb150d 450 Pfam PF00012 Hsp70 protein 3 228 1.0E-14 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RG43_RS09485 f95a85b4608bb166abca1f9e08cb150d 450 Pfam PF00012 Hsp70 protein 330 422 5.9E-7 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RG43_RS09485 f95a85b4608bb166abca1f9e08cb150d 450 Gene3D G3DSA:3.30.420.40 374 433 2.4E-14 T 09-03-2017 RG43_RS09485 f95a85b4608bb166abca1f9e08cb150d 450 Gene3D G3DSA:3.30.420.40 218 241 2.4E-14 T 09-03-2017 RG43_RS09485 f95a85b4608bb166abca1f9e08cb150d 450 SUPERFAMILY SSF53067 208 276 2.4E-30 T 09-03-2017 RG43_RS09485 f95a85b4608bb166abca1f9e08cb150d 450 SUPERFAMILY SSF53067 328 447 2.4E-30 T 09-03-2017 RG43_RS09485 f95a85b4608bb166abca1f9e08cb150d 450 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 213 226 - T 09-03-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 RG43_RS09485 f95a85b4608bb166abca1f9e08cb150d 450 SUPERFAMILY SSF53067 85 205 3.04E-27 T 09-03-2017 RG43_RS09485 f95a85b4608bb166abca1f9e08cb150d 450 SUPERFAMILY SSF53067 2 44 3.04E-27 T 09-03-2017 RG43_RS09485 f95a85b4608bb166abca1f9e08cb150d 450 Gene3D G3DSA:3.90.640.10 306 365 7.1E-4 T 09-03-2017 RG43_RS09485 f95a85b4608bb166abca1f9e08cb150d 450 Gene3D G3DSA:3.30.420.40 85 217 1.7E-30 T 09-03-2017 RG43_RS09485 f95a85b4608bb166abca1f9e08cb150d 450 Gene3D G3DSA:3.30.420.40 2 43 1.7E-30 T 09-03-2017 RG43_RS14855 9fc0ba131fca02429a1ba119bf533d5f 368 Gene3D G3DSA:3.40.50.620 3 211 6.6E-98 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS14855 9fc0ba131fca02429a1ba119bf533d5f 368 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 6 361 41.067 T 09-03-2017 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 RG43_RS14855 9fc0ba131fca02429a1ba119bf533d5f 368 Gene3D G3DSA:2.30.30.280 213 280 3.9E-35 T 09-03-2017 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 Reactome: R-HSA-6787450 RG43_RS14855 9fc0ba131fca02429a1ba119bf533d5f 368 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 6 360 3.0E-161 T 09-03-2017 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 RG43_RS14855 9fc0ba131fca02429a1ba119bf533d5f 368 SUPERFAMILY SSF52402 5 295 1.81E-57 T 09-03-2017 RG43_RS14855 9fc0ba131fca02429a1ba119bf533d5f 368 Pfam PF03054 tRNA methyl transferase 6 360 4.1E-145 T 09-03-2017 RG43_RS14855 9fc0ba131fca02429a1ba119bf533d5f 368 Gene3D G3DSA:2.40.30.10 282 363 3.2E-34 T 09-03-2017 RG43_RS23185 22702d79c7e325e26d37c3cfecba16b4 91 Pfam PF17090 Uncharacterised protein family 30 91 5.0E-16 T 09-03-2017 IPR031381 Uncharacterised protein YtcA RG43_RS12205 c7453519a061c0d9b0e70d1f6505b140 1018 Pfam PF13183 4Fe-4S dicluster domain 576 687 1.5E-12 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS12205 c7453519a061c0d9b0e70d1f6505b140 1018 SUPERFAMILY SSF55103 258 542 1.39E-53 T 09-03-2017 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RG43_RS12205 c7453519a061c0d9b0e70d1f6505b140 1018 Pfam PF01565 FAD binding domain 52 192 1.1E-37 T 09-03-2017 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RG43_RS12205 c7453519a061c0d9b0e70d1f6505b140 1018 Pfam PF02913 FAD linked oxidases, C-terminal domain 281 539 1.3E-66 T 09-03-2017 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RG43_RS12205 c7453519a061c0d9b0e70d1f6505b140 1018 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 673 684 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS12205 c7453519a061c0d9b0e70d1f6505b140 1018 Gene3D G3DSA:3.30.465.10 110 282 4.7E-42 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RG43_RS12205 c7453519a061c0d9b0e70d1f6505b140 1018 SUPERFAMILY SSF56176 18 282 2.71E-54 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RG43_RS12205 c7453519a061c0d9b0e70d1f6505b140 1018 Gene3D G3DSA:3.30.43.10 2 109 2.3E-31 T 09-03-2017 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RG43_RS12205 c7453519a061c0d9b0e70d1f6505b140 1018 SUPERFAMILY SSF46548 655 691 2.51E-8 T 09-03-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 RG43_RS12205 c7453519a061c0d9b0e70d1f6505b140 1018 SUPERFAMILY SSF46548 519 622 2.51E-8 T 09-03-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 RG43_RS12205 c7453519a061c0d9b0e70d1f6505b140 1018 Gene3D G3DSA:1.10.1060.10 654 706 1.7E-15 T 09-03-2017 RG43_RS12205 c7453519a061c0d9b0e70d1f6505b140 1018 Gene3D G3DSA:1.10.1060.10 516 619 1.7E-15 T 09-03-2017 RG43_RS19140 3b529efa1ea6b2541c5aac5e4f1398b7 982 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 585 982 3.3E-85 T 09-03-2017 IPR006315 Outer membrane autotransporter barrel GO:0019867 RG43_RS19140 3b529efa1ea6b2541c5aac5e4f1398b7 982 SMART SM00869 721 971 2.0E-43 T 09-03-2017 IPR005546 Autotransporter beta-domain RG43_RS19140 3b529efa1ea6b2541c5aac5e4f1398b7 982 SUPERFAMILY SSF103515 690 982 3.79E-55 T 09-03-2017 IPR005546 Autotransporter beta-domain RG43_RS19140 3b529efa1ea6b2541c5aac5e4f1398b7 982 Gene3D G3DSA:2.40.128.130 688 982 2.2E-62 T 09-03-2017 IPR005546 Autotransporter beta-domain RG43_RS19140 3b529efa1ea6b2541c5aac5e4f1398b7 982 PRINTS PR01484 Pertactin virulence factor family signature 721 741 1.1E-8 T 09-03-2017 IPR003991 Pertactin virulence factor family GO:0007155 RG43_RS19140 3b529efa1ea6b2541c5aac5e4f1398b7 982 PRINTS PR01484 Pertactin virulence factor family signature 962 982 1.1E-8 T 09-03-2017 IPR003991 Pertactin virulence factor family GO:0007155 RG43_RS19140 3b529efa1ea6b2541c5aac5e4f1398b7 982 PRINTS PR01484 Pertactin virulence factor family signature 937 962 1.1E-8 T 09-03-2017 IPR003991 Pertactin virulence factor family GO:0007155 RG43_RS19140 3b529efa1ea6b2541c5aac5e4f1398b7 982 PRINTS PR01484 Pertactin virulence factor family signature 761 785 1.1E-8 T 09-03-2017 IPR003991 Pertactin virulence factor family GO:0007155 RG43_RS19140 3b529efa1ea6b2541c5aac5e4f1398b7 982 PRINTS PR01484 Pertactin virulence factor family signature 871 894 1.1E-8 T 09-03-2017 IPR003991 Pertactin virulence factor family GO:0007155 RG43_RS19140 3b529efa1ea6b2541c5aac5e4f1398b7 982 Pfam PF03797 Autotransporter beta-domain 720 963 5.3E-45 T 09-03-2017 IPR005546 Autotransporter beta-domain RG43_RS19140 3b529efa1ea6b2541c5aac5e4f1398b7 982 SUPERFAMILY SSF51126 173 257 4.39E-22 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor RG43_RS19140 3b529efa1ea6b2541c5aac5e4f1398b7 982 SUPERFAMILY SSF51126 288 683 4.39E-22 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor RG43_RS21570 71766204d38a1f1236750e09da19d94b 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 226 2.1E-23 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RG43_RS21570 71766204d38a1f1236750e09da19d94b 229 SMART SM00862 150 226 5.0E-23 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RG43_RS21570 71766204d38a1f1236750e09da19d94b 229 Gene3D G3DSA:1.10.10.10 137 227 1.4E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS21570 71766204d38a1f1236750e09da19d94b 229 SMART SM00448 4 115 1.1E-36 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS21570 71766204d38a1f1236750e09da19d94b 229 SUPERFAMILY SSF52172 3 130 3.27E-37 T 09-03-2017 IPR011006 CheY-like superfamily RG43_RS21570 71766204d38a1f1236750e09da19d94b 229 SUPERFAMILY SSF46894 125 226 1.36E-24 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RG43_RS21570 71766204d38a1f1236750e09da19d94b 229 Pfam PF00072 Response regulator receiver domain 6 115 4.4E-26 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS21570 71766204d38a1f1236750e09da19d94b 229 Gene3D G3DSA:3.40.50.2300 2 136 6.4E-36 T 09-03-2017 RG43_RS02810 43a2e6596dda49ad446202ff041a738e 455 PRINTS PR00834 HtrA/DegQ protease family signature 221 238 5.0E-59 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RG43_RS02810 43a2e6596dda49ad446202ff041a738e 455 PRINTS PR00834 HtrA/DegQ protease family signature 199 216 5.0E-59 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RG43_RS02810 43a2e6596dda49ad446202ff041a738e 455 PRINTS PR00834 HtrA/DegQ protease family signature 102 114 5.0E-59 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RG43_RS02810 43a2e6596dda49ad446202ff041a738e 455 PRINTS PR00834 HtrA/DegQ protease family signature 307 319 5.0E-59 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RG43_RS02810 43a2e6596dda49ad446202ff041a738e 455 PRINTS PR00834 HtrA/DegQ protease family signature 123 143 5.0E-59 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RG43_RS02810 43a2e6596dda49ad446202ff041a738e 455 PRINTS PR00834 HtrA/DegQ protease family signature 164 188 5.0E-59 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RG43_RS02810 43a2e6596dda49ad446202ff041a738e 455 SMART SM00228 267 349 9.3E-14 T 09-03-2017 IPR001478 PDZ domain GO:0005515 RG43_RS02810 43a2e6596dda49ad446202ff041a738e 455 SMART SM00228 374 447 1.8E-11 T 09-03-2017 IPR001478 PDZ domain GO:0005515 RG43_RS02810 43a2e6596dda49ad446202ff041a738e 455 Gene3D G3DSA:2.40.10.10 39 154 1.9E-34 T 09-03-2017 RG43_RS02810 43a2e6596dda49ad446202ff041a738e 455 Pfam PF13180 PDZ domain 285 358 1.0E-17 T 09-03-2017 IPR001478 PDZ domain GO:0005515 RG43_RS02810 43a2e6596dda49ad446202ff041a738e 455 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 41 453 1.1E-160 T 09-03-2017 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 RG43_RS02810 43a2e6596dda49ad446202ff041a738e 455 Gene3D G3DSA:2.30.42.10 269 364 5.8E-30 T 09-03-2017 IPR001478 PDZ domain GO:0005515 RG43_RS02810 43a2e6596dda49ad446202ff041a738e 455 SUPERFAMILY SSF50156 225 350 3.68E-24 T 09-03-2017 IPR001478 PDZ domain GO:0005515 RG43_RS02810 43a2e6596dda49ad446202ff041a738e 455 Gene3D G3DSA:2.40.10.10 156 268 1.6E-43 T 09-03-2017 RG43_RS02810 43a2e6596dda49ad446202ff041a738e 455 Pfam PF13365 Trypsin-like peptidase domain 92 228 8.6E-30 T 09-03-2017 RG43_RS02810 43a2e6596dda49ad446202ff041a738e 455 SUPERFAMILY SSF50156 386 452 1.84E-15 T 09-03-2017 IPR001478 PDZ domain GO:0005515 RG43_RS02810 43a2e6596dda49ad446202ff041a738e 455 Gene3D G3DSA:2.30.42.10 387 452 3.6E-17 T 09-03-2017 IPR001478 PDZ domain GO:0005515 RG43_RS02810 43a2e6596dda49ad446202ff041a738e 455 SUPERFAMILY SSF50494 39 262 6.15E-63 T 09-03-2017 IPR009003 Peptidase S1, PA clan RG43_RS02810 43a2e6596dda49ad446202ff041a738e 455 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 373 443 2.1E-12 T 09-03-2017 IPR001478 PDZ domain GO:0005515 RG43_RS02450 389919749e70ffc67e9bf46e53468622 144 Gene3D G3DSA:3.100.10.10 32 143 3.8E-27 T 09-03-2017 RG43_RS02450 389919749e70ffc67e9bf46e53468622 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 09-03-2017 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02450 389919749e70ffc67e9bf46e53468622 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 1.9E-51 T 09-03-2017 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS02450 389919749e70ffc67e9bf46e53468622 144 SUPERFAMILY SSF52080 4 143 1.83E-46 T 09-03-2017 IPR021131 Ribosomal protein L18e/L15P RG43_RS02450 389919749e70ffc67e9bf46e53468622 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 2.0E-32 T 09-03-2017 IPR021131 Ribosomal protein L18e/L15P RG43_RS02450 389919749e70ffc67e9bf46e53468622 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.536 T 09-03-2017 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 RG43_RS11375 e59fdb20e0ba8e45eab7a73b13a0442b 218 Pfam PF00795 Carbon-nitrogen hydrolase 5 113 1.5E-16 T 09-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RG43_RS11375 e59fdb20e0ba8e45eab7a73b13a0442b 218 SUPERFAMILY SSF56317 4 196 2.88E-18 T 09-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RG43_RS11375 e59fdb20e0ba8e45eab7a73b13a0442b 218 Gene3D G3DSA:3.60.110.10 3 113 3.9E-11 T 09-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RG43_RS08630 e2ec45db97079a3d3dafc1717b969cdf 1534 SMART SM01359 660 806 8.6E-29 T 09-03-2017 IPR011625 Alpha-2-macroglobulin, N-terminal 2 RG43_RS08630 e2ec45db97079a3d3dafc1717b969cdf 1534 SUPERFAMILY SSF48239 1057 1149 2.82E-5 T 09-03-2017 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RG43_RS08630 e2ec45db97079a3d3dafc1717b969cdf 1534 Pfam PF01835 MG2 domain 344 440 1.4E-17 T 09-03-2017 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 RG43_RS08630 e2ec45db97079a3d3dafc1717b969cdf 1534 Gene3D G3DSA:2.60.40.670 566 634 0.001 T 09-03-2017 IPR000601 PKD domain RG43_RS08630 e2ec45db97079a3d3dafc1717b969cdf 1534 Pfam PF00207 Alpha-2-macroglobulin family 871 954 3.3E-15 T 09-03-2017 IPR001599 Alpha-2-macroglobulin GO:0004866 RG43_RS08630 e2ec45db97079a3d3dafc1717b969cdf 1534 SMART SM01360 871 962 2.5E-19 T 09-03-2017 IPR001599 Alpha-2-macroglobulin GO:0004866 RG43_RS08630 e2ec45db97079a3d3dafc1717b969cdf 1534 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 660 806 1.4E-12 T 09-03-2017 IPR011625 Alpha-2-macroglobulin, N-terminal 2 RG43_RS17800 f35ceae8be8a2b1d298ba3a79f389400 474 SUPERFAMILY SSF102114 127 373 4.19E-64 T 09-03-2017 RG43_RS17800 f35ceae8be8a2b1d298ba3a79f389400 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 6.3E-223 T 09-03-2017 RG43_RS17800 f35ceae8be8a2b1d298ba3a79f389400 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 7.7E-160 T 09-03-2017 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 RG43_RS17800 f35ceae8be8a2b1d298ba3a79f389400 474 Gene3D G3DSA:3.80.30.20 146 380 8.7E-80 T 09-03-2017 IPR023404 Radical SAM, alpha/beta horseshoe RG43_RS17800 f35ceae8be8a2b1d298ba3a79f389400 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 09-03-2017 IPR020612 Methylthiotransferase, conserved site GO:0051539 RG43_RS17800 f35ceae8be8a2b1d298ba3a79f389400 474 Pfam PF04055 Radical SAM superfamily 151 325 2.2E-27 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 RG43_RS17800 f35ceae8be8a2b1d298ba3a79f389400 474 Pfam PF01938 TRAM domain 378 440 6.2E-21 T 09-03-2017 IPR002792 TRAM domain RG43_RS17800 f35ceae8be8a2b1d298ba3a79f389400 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 3.0E-29 T 09-03-2017 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 RG43_RS17800 f35ceae8be8a2b1d298ba3a79f389400 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 75.56 T 09-03-2017 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 RG43_RS17800 f35ceae8be8a2b1d298ba3a79f389400 474 SMART SM00729 147 367 7.6E-65 T 09-03-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RG43_RS06135 abd6cb9adf4e989af652d31e664f37fa 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 2 207 7.8E-99 T 09-03-2017 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 RG43_RS06135 abd6cb9adf4e989af652d31e664f37fa 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 5 206 1.9E-81 T 09-03-2017 RG43_RS06135 abd6cb9adf4e989af652d31e664f37fa 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 38.988 T 09-03-2017 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 RG43_RS06135 abd6cb9adf4e989af652d31e664f37fa 208 SUPERFAMILY SSF53335 12 204 4.87E-46 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS06135 abd6cb9adf4e989af652d31e664f37fa 208 Gene3D G3DSA:3.40.50.150 12 205 2.2E-63 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS06135 abd6cb9adf4e989af652d31e664f37fa 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 09-03-2017 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 RG43_RS22910 55cbfb1765fa3dd4aaa0ec13787026c2 485 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 139 151 - T 09-03-2017 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 RG43_RS22910 55cbfb1765fa3dd4aaa0ec13787026c2 485 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 64 88 - T 09-03-2017 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 RG43_RS22910 55cbfb1765fa3dd4aaa0ec13787026c2 485 SUPERFAMILY SSF103473 213 472 6.28E-5 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS22910 55cbfb1765fa3dd4aaa0ec13787026c2 485 SUPERFAMILY SSF103473 4 290 1.96E-27 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS22910 55cbfb1765fa3dd4aaa0ec13787026c2 485 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 6 457 3.3E-80 T 09-03-2017 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 RG43_RS22910 55cbfb1765fa3dd4aaa0ec13787026c2 485 Pfam PF00854 POT family 76 437 6.0E-90 T 09-03-2017 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 RG43_RS22910 55cbfb1765fa3dd4aaa0ec13787026c2 485 Gene3D G3DSA:1.20.1250.20 18 185 1.2E-19 T 09-03-2017 RG43_RS11780 f4af71ea214c1b0f3914e4c166f97980 338 PIRSF PIRSF001220 1 334 5.2E-98 T 09-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 RG43_RS11780 f4af71ea214c1b0f3914e4c166f97980 338 PIRSF PIRSF500176 2 332 1.7E-120 T 09-03-2017 RG43_RS11780 f4af71ea214c1b0f3914e4c166f97980 338 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 09-03-2017 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 RG43_RS11780 f4af71ea214c1b0f3914e4c166f97980 338 SMART SM00870 5 323 3.7E-143 T 09-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 RG43_RS11780 f4af71ea214c1b0f3914e4c166f97980 338 Pfam PF00710 Asparaginase, N-terminal 6 188 1.1E-66 T 09-03-2017 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 RG43_RS11780 f4af71ea214c1b0f3914e4c166f97980 338 SUPERFAMILY SSF53774 3 335 1.7E-114 T 09-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 RG43_RS11780 f4af71ea214c1b0f3914e4c166f97980 338 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 09-03-2017 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 RG43_RS11780 f4af71ea214c1b0f3914e4c166f97980 338 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 3 335 3.5E-144 T 09-03-2017 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 RG43_RS11780 f4af71ea214c1b0f3914e4c166f97980 338 Gene3D G3DSA:3.40.50.1170 5 197 4.0E-79 T 09-03-2017 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 RG43_RS11780 f4af71ea214c1b0f3914e4c166f97980 338 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 4.1E-17 T 09-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 RG43_RS11780 f4af71ea214c1b0f3914e4c166f97980 338 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 4.1E-17 T 09-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 RG43_RS11780 f4af71ea214c1b0f3914e4c166f97980 338 PRINTS PR00139 Asparaginase/glutaminase family signature 260 278 4.1E-17 T 09-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 RG43_RS11780 f4af71ea214c1b0f3914e4c166f97980 338 Gene3D G3DSA:3.40.50.40 211 336 8.3E-52 T 09-03-2017 IPR027473 L-asparaginase, C-terminal domain Reactome: R-HSA-70614 RG43_RS09140 8f41c13fb8450ce57bf5d524aaf3b9cc 195 Pfam PF06930 Protein of unknown function (DUF1282) 7 177 1.7E-43 T 09-03-2017 IPR009698 Protein of unknown function DUF1282 RG43_RS20955 67c22d24a4fecc63a4a9f31a1825f13b 474 Gene3D G3DSA:3.50.50.60 152 271 7.6E-36 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS20955 67c22d24a4fecc63a4a9f31a1825f13b 474 Gene3D G3DSA:3.30.390.30 336 462 2.3E-44 T 09-03-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RG43_RS20955 67c22d24a4fecc63a4a9f31a1825f13b 474 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 09-03-2017 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 RG43_RS20955 67c22d24a4fecc63a4a9f31a1825f13b 474 SUPERFAMILY SSF51905 2 338 7.41E-58 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS20955 67c22d24a4fecc63a4a9f31a1825f13b 474 PIRSF PIRSF000350 1 468 2.6E-87 T 09-03-2017 RG43_RS20955 67c22d24a4fecc63a4a9f31a1825f13b 474 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 4.4E-63 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS20955 67c22d24a4fecc63a4a9f31a1825f13b 474 Gene3D G3DSA:3.50.50.60 272 335 5.6E-68 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS20955 67c22d24a4fecc63a4a9f31a1825f13b 474 Gene3D G3DSA:3.50.50.60 6 149 5.6E-68 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS20955 67c22d24a4fecc63a4a9f31a1825f13b 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 1.3E-69 T 09-03-2017 RG43_RS20955 67c22d24a4fecc63a4a9f31a1825f13b 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 1.3E-69 T 09-03-2017 RG43_RS20955 67c22d24a4fecc63a4a9f31a1825f13b 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 1.3E-69 T 09-03-2017 RG43_RS20955 67c22d24a4fecc63a4a9f31a1825f13b 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 1.3E-69 T 09-03-2017 RG43_RS20955 67c22d24a4fecc63a4a9f31a1825f13b 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 1.3E-69 T 09-03-2017 RG43_RS20955 67c22d24a4fecc63a4a9f31a1825f13b 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 1.3E-69 T 09-03-2017 RG43_RS20955 67c22d24a4fecc63a4a9f31a1825f13b 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 1.3E-69 T 09-03-2017 RG43_RS20955 67c22d24a4fecc63a4a9f31a1825f13b 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 1.3E-69 T 09-03-2017 RG43_RS20955 67c22d24a4fecc63a4a9f31a1825f13b 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.3E-69 T 09-03-2017 RG43_RS20955 67c22d24a4fecc63a4a9f31a1825f13b 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 3.8E-41 T 09-03-2017 RG43_RS20955 67c22d24a4fecc63a4a9f31a1825f13b 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 3.8E-41 T 09-03-2017 RG43_RS20955 67c22d24a4fecc63a4a9f31a1825f13b 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 3.8E-41 T 09-03-2017 RG43_RS20955 67c22d24a4fecc63a4a9f31a1825f13b 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 3.8E-41 T 09-03-2017 RG43_RS20955 67c22d24a4fecc63a4a9f31a1825f13b 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 3.8E-41 T 09-03-2017 RG43_RS20955 67c22d24a4fecc63a4a9f31a1825f13b 474 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 4.1E-35 T 09-03-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RG43_RS20955 67c22d24a4fecc63a4a9f31a1825f13b 474 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 7 460 1.0E-150 T 09-03-2017 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 RG43_RS20955 67c22d24a4fecc63a4a9f31a1825f13b 474 SUPERFAMILY SSF55424 343 466 8.42E-39 T 09-03-2017 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RG43_RS01485 6d977bb96b25187abc5348661bf9f009 133 SUPERFAMILY SSF47598 1 45 3.6E-12 T 09-03-2017 IPR010985 Ribbon-helix-helix GO:0006355 RG43_RS01485 6d977bb96b25187abc5348661bf9f009 133 Pfam PF01402 Ribbon-helix-helix protein, copG family 3 42 1.5E-11 T 09-03-2017 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 RG43_RS01485 6d977bb96b25187abc5348661bf9f009 133 Gene3D G3DSA:1.10.1220.10 1 46 1.1E-23 T 09-03-2017 IPR013321 Arc-type ribbon-helix-helix GO:0006355 RG43_RS01485 6d977bb96b25187abc5348661bf9f009 133 SUPERFAMILY SSF55021 53 132 2.52E-26 T 09-03-2017 RG43_RS01485 6d977bb96b25187abc5348661bf9f009 133 Gene3D G3DSA:3.30.70.1150 50 132 7.0E-34 T 09-03-2017 RG43_RS01485 6d977bb96b25187abc5348661bf9f009 133 TIGRFAM TIGR02793 nikR: nickel-responsive transcriptional regulator NikR 2 130 8.0E-68 T 09-03-2017 IPR014160 Nickel-responsive transcriptional regulator NikR, proteobacteria GO:0010045|GO:0016151 RG43_RS01485 6d977bb96b25187abc5348661bf9f009 133 Pfam PF08753 NikR C terminal nickel binding domain 54 127 1.2E-27 T 09-03-2017 IPR014864 Transcription factor, NikR, nickel binding C-terminal RG43_RS01485 6d977bb96b25187abc5348661bf9f009 133 Hamap MF_00476 Putative nickel-responsive regulator [nikR]. 1 131 27.936 T 09-03-2017 IPR022988 Nickel-responsive transcriptional regulator NikR GO:0003677|GO:0006355|GO:0010045|GO:0016151 RG43_RS20940 635797ea0e3c95d97baae06fe42901ab 865 Gene3D G3DSA:3.40.1060.10 520 682 8.1E-89 T 09-03-2017 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS20940 635797ea0e3c95d97baae06fe42901ab 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 09-03-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 RG43_RS20940 635797ea0e3c95d97baae06fe42901ab 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 854 0.0 T 09-03-2017 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 RG43_RS20940 635797ea0e3c95d97baae06fe42901ab 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 7.3E-40 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS20940 635797ea0e3c95d97baae06fe42901ab 865 Gene3D G3DSA:3.20.19.10 162 361 6.1E-95 T 09-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RG43_RS20940 635797ea0e3c95d97baae06fe42901ab 865 PIRSF PIRSF036687 1 859 0.0 T 09-03-2017 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 RG43_RS20940 635797ea0e3c95d97baae06fe42901ab 865 Gene3D G3DSA:3.30.499.10 403 519 3.6E-64 T 09-03-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS20940 635797ea0e3c95d97baae06fe42901ab 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 8.4E-98 T 09-03-2017 IPR015929 Aconitase B, N-terminal GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 RG43_RS20940 635797ea0e3c95d97baae06fe42901ab 865 SUPERFAMILY SSF52016 163 370 1.15E-71 T 09-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RG43_RS20940 635797ea0e3c95d97baae06fe42901ab 865 Gene3D G3DSA:3.30.499.10 684 859 6.8E-56 T 09-03-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS20940 635797ea0e3c95d97baae06fe42901ab 865 SUPERFAMILY SSF74778 2 160 6.02E-70 T 09-03-2017 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 RG43_RS20940 635797ea0e3c95d97baae06fe42901ab 865 SUPERFAMILY SSF53732 380 859 2.22E-150 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS20940 635797ea0e3c95d97baae06fe42901ab 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 9.8E-69 T 09-03-2017 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 RG43_RS20940 635797ea0e3c95d97baae06fe42901ab 865 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 09-03-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 RG43_RS19300 a5719bb028ad53563613f00cb95bce5a 219 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 09-03-2017 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RG43_RS19300 a5719bb028ad53563613f00cb95bce5a 219 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 39 46 - T 09-03-2017 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RG43_RS19300 a5719bb028ad53563613f00cb95bce5a 219 Gene3D G3DSA:3.40.1050.10 2 202 1.3E-67 T 09-03-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RG43_RS19300 a5719bb028ad53563613f00cb95bce5a 219 SMART SM00947 27 193 2.6E-66 T 09-03-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RG43_RS19300 a5719bb028ad53563613f00cb95bce5a 219 Pfam PF00484 Carbonic anhydrase 34 188 1.2E-48 T 09-03-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RG43_RS19300 a5719bb028ad53563613f00cb95bce5a 219 SUPERFAMILY SSF53056 2 202 1.44E-63 T 09-03-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RG43_RS24055 6ee9f526c448899297536ba6979719f7 541 Gene3D G3DSA:3.90.780.10 353 537 9.5E-48 T 09-03-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS24055 6ee9f526c448899297536ba6979719f7 541 Pfam PF02872 5'-nucleotidase, C-terminal domain 363 500 3.3E-35 T 09-03-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS24055 6ee9f526c448899297536ba6979719f7 541 Pfam PF00149 Calcineurin-like phosphoesterase 29 277 1.6E-10 T 09-03-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RG43_RS24055 6ee9f526c448899297536ba6979719f7 541 SUPERFAMILY SSF55816 351 536 1.57E-48 T 09-03-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS24055 6ee9f526c448899297536ba6979719f7 541 ProSitePatterns PS00786 5'-nucleotidase signature 2. 107 118 - T 09-03-2017 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS24055 6ee9f526c448899297536ba6979719f7 541 PRINTS PR01607 Apyrase family signature 225 242 3.7E-19 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS24055 6ee9f526c448899297536ba6979719f7 541 PRINTS PR01607 Apyrase family signature 26 44 3.7E-19 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS24055 6ee9f526c448899297536ba6979719f7 541 PRINTS PR01607 Apyrase family signature 474 493 3.7E-19 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS24055 6ee9f526c448899297536ba6979719f7 541 PRINTS PR01607 Apyrase family signature 404 427 3.7E-19 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS24055 6ee9f526c448899297536ba6979719f7 541 PRINTS PR01607 Apyrase family signature 260 283 3.7E-19 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS24055 6ee9f526c448899297536ba6979719f7 541 SUPERFAMILY SSF56300 206 362 4.6E-69 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like RG43_RS24055 6ee9f526c448899297536ba6979719f7 541 SUPERFAMILY SSF56300 27 178 4.6E-69 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like RG43_RS24055 6ee9f526c448899297536ba6979719f7 541 Gene3D G3DSA:3.60.21.10 26 351 1.2E-76 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like RG43_RS19160 9c34f52058935bfef6a3aa2d3042d42d 255 SMART SM00382 26 205 7.0E-17 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS19160 9c34f52058935bfef6a3aa2d3042d42d 255 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS19160 9c34f52058935bfef6a3aa2d3042d42d 255 Pfam PF00005 ABC transporter 17 156 1.6E-32 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS19160 9c34f52058935bfef6a3aa2d3042d42d 255 Gene3D G3DSA:3.40.50.300 1 205 9.8E-65 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS19160 9c34f52058935bfef6a3aa2d3042d42d 255 SUPERFAMILY SSF52540 1 212 8.24E-67 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS07195 51b29a86fa35a90f650692e52981b3d8 335 SMART SM00530 18 79 2.2E-6 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RG43_RS07195 51b29a86fa35a90f650692e52981b3d8 335 Gene3D G3DSA:1.10.260.40 6 86 1.0E-14 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS07195 51b29a86fa35a90f650692e52981b3d8 335 SUPERFAMILY SSF47413 14 83 9.65E-9 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS07195 51b29a86fa35a90f650692e52981b3d8 335 Hamap MF_02017 Cytoskeleton protein RodZ [rodZ]. 1 330 45.638 T 09-03-2017 IPR023690 Cytoskeleton protein RodZ GO:0008360|GO:0016021 RG43_RS07195 51b29a86fa35a90f650692e52981b3d8 335 Pfam PF13464 Domain of unknown function (DUF4115) 253 327 9.2E-24 T 09-03-2017 IPR025194 Domain of unknown function DUF4115 RG43_RS07195 51b29a86fa35a90f650692e52981b3d8 335 Pfam PF13413 Helix-turn-helix domain 18 78 5.1E-15 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS12660 f69ce3912019278710d3fa6e9e1d35a6 510 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 170 195 - T 09-03-2017 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 RG43_RS12660 f69ce3912019278710d3fa6e9e1d35a6 510 SMART SM01002 146 311 5.5E-85 T 09-03-2017 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RG43_RS12660 f69ce3912019278710d3fa6e9e1d35a6 510 Gene3D G3DSA:3.40.50.1770 202 371 4.2E-47 T 09-03-2017 RG43_RS12660 f69ce3912019278710d3fa6e9e1d35a6 510 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 510 0.0 T 09-03-2017 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 RG43_RS12660 f69ce3912019278710d3fa6e9e1d35a6 510 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 9.4E-52 T 09-03-2017 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RG43_RS12660 f69ce3912019278710d3fa6e9e1d35a6 510 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 427 509 3.9E-36 T 09-03-2017 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 RG43_RS12660 f69ce3912019278710d3fa6e9e1d35a6 510 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 09-03-2017 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 RG43_RS12660 f69ce3912019278710d3fa6e9e1d35a6 510 SUPERFAMILY SSF51735 137 317 1.69E-38 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS12660 f69ce3912019278710d3fa6e9e1d35a6 510 SUPERFAMILY SSF52283 1 168 1.02E-56 T 09-03-2017 RG43_RS12660 f69ce3912019278710d3fa6e9e1d35a6 510 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 368 1.7E-76 T 09-03-2017 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RG43_RS12660 f69ce3912019278710d3fa6e9e1d35a6 510 Gene3D G3DSA:3.40.50.1770 1 168 1.1E-69 T 09-03-2017 RG43_RS12660 f69ce3912019278710d3fa6e9e1d35a6 510 Gene3D G3DSA:3.50.50.60 169 201 4.7E-6 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS12660 f69ce3912019278710d3fa6e9e1d35a6 510 SMART SM01003 4 137 5.3E-76 T 09-03-2017 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RG43_RS12660 f69ce3912019278710d3fa6e9e1d35a6 510 PIRSF PIRSF000203 1 509 1.2E-288 T 09-03-2017 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 RG43_RS14965 73b02d4ad99a424c0b72a434a130c16e 85 Pfam PF07338 Protein of unknown function (DUF1471) 34 85 3.5E-19 T 09-03-2017 IPR010854 Domain of unknown function DUF1471 RG43_RS14965 73b02d4ad99a424c0b72a434a130c16e 85 Gene3D G3DSA:3.30.1660.10 18 85 1.5E-26 T 09-03-2017 IPR025543 Dodecin-like RG43_RS14965 73b02d4ad99a424c0b72a434a130c16e 85 SUPERFAMILY SSF159871 3 85 2.62E-24 T 09-03-2017 IPR010854 Domain of unknown function DUF1471 RG43_RS26800 d85883d00fc71256116b838603e1f85d 686 PRINTS PR00811 Bacterial general secretion pathway protein D signature 461 485 4.7E-37 T 09-03-2017 IPR001775 GspD/PilQ family RG43_RS26800 d85883d00fc71256116b838603e1f85d 686 PRINTS PR00811 Bacterial general secretion pathway protein D signature 362 372 4.7E-37 T 09-03-2017 IPR001775 GspD/PilQ family RG43_RS26800 d85883d00fc71256116b838603e1f85d 686 PRINTS PR00811 Bacterial general secretion pathway protein D signature 496 506 4.7E-37 T 09-03-2017 IPR001775 GspD/PilQ family RG43_RS26800 d85883d00fc71256116b838603e1f85d 686 PRINTS PR00811 Bacterial general secretion pathway protein D signature 590 608 4.7E-37 T 09-03-2017 IPR001775 GspD/PilQ family RG43_RS26800 d85883d00fc71256116b838603e1f85d 686 PRINTS PR00811 Bacterial general secretion pathway protein D signature 613 627 4.7E-37 T 09-03-2017 IPR001775 GspD/PilQ family RG43_RS26800 d85883d00fc71256116b838603e1f85d 686 Pfam PF03958 Bacterial type II/III secretion system short domain 211 277 3.1E-16 T 09-03-2017 IPR005644 NolW-like RG43_RS26800 d85883d00fc71256116b838603e1f85d 686 Pfam PF03958 Bacterial type II/III secretion system short domain 145 206 1.7E-10 T 09-03-2017 IPR005644 NolW-like RG43_RS26800 d85883d00fc71256116b838603e1f85d 686 Pfam PF03958 Bacterial type II/III secretion system short domain 285 362 6.5E-16 T 09-03-2017 IPR005644 NolW-like RG43_RS26800 d85883d00fc71256116b838603e1f85d 686 PRINTS PR01032 Gene IV protein signature 446 469 3.3E-16 T 09-03-2017 RG43_RS26800 d85883d00fc71256116b838603e1f85d 686 PRINTS PR01032 Gene IV protein signature 553 581 3.3E-16 T 09-03-2017 RG43_RS26800 d85883d00fc71256116b838603e1f85d 686 PRINTS PR01032 Gene IV protein signature 486 509 3.3E-16 T 09-03-2017 RG43_RS26800 d85883d00fc71256116b838603e1f85d 686 PRINTS PR01032 Gene IV protein signature 606 628 3.3E-16 T 09-03-2017 RG43_RS26800 d85883d00fc71256116b838603e1f85d 686 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 47 634 6.4E-166 T 09-03-2017 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 RG43_RS26800 d85883d00fc71256116b838603e1f85d 686 Pfam PF00263 Bacterial type II and III secretion system protein 465 626 3.8E-51 T 09-03-2017 IPR004846 Type II/III secretion system GO:0009306 RG43_RS04425 d85883d00fc71256116b838603e1f85d 686 PRINTS PR00811 Bacterial general secretion pathway protein D signature 461 485 4.7E-37 T 09-03-2017 IPR001775 GspD/PilQ family RG43_RS04425 d85883d00fc71256116b838603e1f85d 686 PRINTS PR00811 Bacterial general secretion pathway protein D signature 362 372 4.7E-37 T 09-03-2017 IPR001775 GspD/PilQ family RG43_RS04425 d85883d00fc71256116b838603e1f85d 686 PRINTS PR00811 Bacterial general secretion pathway protein D signature 496 506 4.7E-37 T 09-03-2017 IPR001775 GspD/PilQ family RG43_RS04425 d85883d00fc71256116b838603e1f85d 686 PRINTS PR00811 Bacterial general secretion pathway protein D signature 590 608 4.7E-37 T 09-03-2017 IPR001775 GspD/PilQ family RG43_RS04425 d85883d00fc71256116b838603e1f85d 686 PRINTS PR00811 Bacterial general secretion pathway protein D signature 613 627 4.7E-37 T 09-03-2017 IPR001775 GspD/PilQ family RG43_RS04425 d85883d00fc71256116b838603e1f85d 686 Pfam PF03958 Bacterial type II/III secretion system short domain 211 277 3.1E-16 T 09-03-2017 IPR005644 NolW-like RG43_RS04425 d85883d00fc71256116b838603e1f85d 686 Pfam PF03958 Bacterial type II/III secretion system short domain 145 206 1.7E-10 T 09-03-2017 IPR005644 NolW-like RG43_RS04425 d85883d00fc71256116b838603e1f85d 686 Pfam PF03958 Bacterial type II/III secretion system short domain 285 362 6.5E-16 T 09-03-2017 IPR005644 NolW-like RG43_RS04425 d85883d00fc71256116b838603e1f85d 686 PRINTS PR01032 Gene IV protein signature 446 469 3.3E-16 T 09-03-2017 RG43_RS04425 d85883d00fc71256116b838603e1f85d 686 PRINTS PR01032 Gene IV protein signature 553 581 3.3E-16 T 09-03-2017 RG43_RS04425 d85883d00fc71256116b838603e1f85d 686 PRINTS PR01032 Gene IV protein signature 486 509 3.3E-16 T 09-03-2017 RG43_RS04425 d85883d00fc71256116b838603e1f85d 686 PRINTS PR01032 Gene IV protein signature 606 628 3.3E-16 T 09-03-2017 RG43_RS04425 d85883d00fc71256116b838603e1f85d 686 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 47 634 6.4E-166 T 09-03-2017 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 RG43_RS04425 d85883d00fc71256116b838603e1f85d 686 Pfam PF00263 Bacterial type II and III secretion system protein 465 626 3.8E-51 T 09-03-2017 IPR004846 Type II/III secretion system GO:0009306 RG43_RS13095 be28f6778ebcc0b5a7454231bc2bb7f5 931 Pfam PF05193 Peptidase M16 inactive domain 207 386 6.0E-25 T 09-03-2017 IPR007863 Peptidase M16, C-terminal RG43_RS13095 be28f6778ebcc0b5a7454231bc2bb7f5 931 Pfam PF05193 Peptidase M16 inactive domain 697 862 2.6E-17 T 09-03-2017 IPR007863 Peptidase M16, C-terminal RG43_RS13095 be28f6778ebcc0b5a7454231bc2bb7f5 931 SUPERFAMILY SSF63411 259 452 2.44E-7 T 09-03-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RG43_RS13095 be28f6778ebcc0b5a7454231bc2bb7f5 931 SUPERFAMILY SSF63411 35 251 2.44E-45 T 09-03-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RG43_RS13095 be28f6778ebcc0b5a7454231bc2bb7f5 931 SUPERFAMILY SSF63411 511 732 7.68E-21 T 09-03-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RG43_RS13095 be28f6778ebcc0b5a7454231bc2bb7f5 931 SUPERFAMILY SSF63411 749 923 2.27E-16 T 09-03-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RG43_RS13095 be28f6778ebcc0b5a7454231bc2bb7f5 931 Gene3D G3DSA:3.30.830.10 263 427 7.7E-5 T 09-03-2017 IPR011237 Peptidase M16 domain GO:0046872 RG43_RS13095 be28f6778ebcc0b5a7454231bc2bb7f5 931 Gene3D G3DSA:3.30.830.10 792 918 1.5E-12 T 09-03-2017 IPR011237 Peptidase M16 domain GO:0046872 RG43_RS13095 be28f6778ebcc0b5a7454231bc2bb7f5 931 Pfam PF00675 Insulinase (Peptidase family M16) 46 203 1.2E-42 T 09-03-2017 IPR011765 Peptidase M16, N-terminal RG43_RS13095 be28f6778ebcc0b5a7454231bc2bb7f5 931 Gene3D G3DSA:3.30.830.10 22 262 6.6E-52 T 09-03-2017 IPR011237 Peptidase M16 domain GO:0046872 RG43_RS13095 be28f6778ebcc0b5a7454231bc2bb7f5 931 Gene3D G3DSA:3.30.830.10 507 733 3.2E-18 T 09-03-2017 IPR011237 Peptidase M16 domain GO:0046872 RG43_RS13095 be28f6778ebcc0b5a7454231bc2bb7f5 931 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 67 90 - T 09-03-2017 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 RG43_RS19735 59f6f1044e0eb79a2b61c7bb158db7d9 271 Gene3D G3DSA:3.30.420.10 104 262 2.0E-35 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS19735 59f6f1044e0eb79a2b61c7bb158db7d9 271 SUPERFAMILY SSF53098 103 265 1.01E-39 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS19735 59f6f1044e0eb79a2b61c7bb158db7d9 271 Pfam PF00665 Integrase core domain 109 223 6.6E-31 T 09-03-2017 IPR001584 Integrase, catalytic core GO:0015074 RG43_RS19735 59f6f1044e0eb79a2b61c7bb158db7d9 271 Pfam PF13276 HTH-like domain 36 84 1.9E-11 T 09-03-2017 IPR025948 HTH-like domain RG43_RS17335 95d6b9a5e688947f79739e307a1680a9 134 Pfam PF03061 Thioesterase superfamily 20 103 2.1E-18 T 09-03-2017 IPR006683 Thioesterase domain Reactome: R-HSA-75105 RG43_RS17335 95d6b9a5e688947f79739e307a1680a9 134 PIRSF PIRSF003230 1 134 1.5E-50 T 09-03-2017 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 RG43_RS17335 95d6b9a5e688947f79739e307a1680a9 134 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 125 1.2E-50 T 09-03-2017 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 RG43_RS17335 95d6b9a5e688947f79739e307a1680a9 134 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 6 130 1.4E-51 T 09-03-2017 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 RG43_RS17335 95d6b9a5e688947f79739e307a1680a9 134 Gene3D G3DSA:3.10.129.10 4 133 1.0E-48 T 09-03-2017 IPR029069 HotDog domain RG43_RS17335 95d6b9a5e688947f79739e307a1680a9 134 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 11 28 - T 09-03-2017 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 RG43_RS17335 95d6b9a5e688947f79739e307a1680a9 134 SUPERFAMILY SSF54637 4 133 2.24E-40 T 09-03-2017 IPR029069 HotDog domain RG43_RS11635 e5abdb91de34168a31fa7ff7cc54f094 374 Gene3D G3DSA:3.90.380.10 152 225 1.2E-13 T 09-03-2017 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 RG43_RS11635 e5abdb91de34168a31fa7ff7cc54f094 374 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 61 76 9.6E-26 T 09-03-2017 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 RG43_RS11635 e5abdb91de34168a31fa7ff7cc54f094 374 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 144 170 9.6E-26 T 09-03-2017 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 RG43_RS11635 e5abdb91de34168a31fa7ff7cc54f094 374 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 103 123 9.6E-26 T 09-03-2017 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 RG43_RS11635 e5abdb91de34168a31fa7ff7cc54f094 374 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 31 56 9.6E-26 T 09-03-2017 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 RG43_RS11635 e5abdb91de34168a31fa7ff7cc54f094 374 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 82 102 9.6E-26 T 09-03-2017 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 RG43_RS11635 e5abdb91de34168a31fa7ff7cc54f094 374 SUPERFAMILY SSF50022 18 159 1.09E-47 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RG43_RS11635 e5abdb91de34168a31fa7ff7cc54f094 374 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 89 112 - T 09-03-2017 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 RG43_RS11635 e5abdb91de34168a31fa7ff7cc54f094 374 SUPERFAMILY SSF55961 160 371 2.2E-33 T 09-03-2017 RG43_RS11635 e5abdb91de34168a31fa7ff7cc54f094 374 Pfam PF00355 Rieske [2Fe-2S] domain 46 134 1.3E-20 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RG43_RS11635 e5abdb91de34168a31fa7ff7cc54f094 374 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 184 370 4.4E-21 T 09-03-2017 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 RG43_RS11635 e5abdb91de34168a31fa7ff7cc54f094 374 Gene3D G3DSA:2.102.10.10 46 151 1.3E-27 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RG43_RS15760 b39bfa938221d3624fb3e59b2337251e 105 SMART SM00992 3 102 3.3E-33 T 09-03-2017 IPR011722 Hemimethylated DNA-binding domain GO:0003677 RG43_RS15760 b39bfa938221d3624fb3e59b2337251e 105 Pfam PF08755 Hemimethylated DNA-binding protein YccV like 5 96 9.3E-19 T 09-03-2017 IPR011722 Hemimethylated DNA-binding domain GO:0003677 RG43_RS15760 b39bfa938221d3624fb3e59b2337251e 105 SUPERFAMILY SSF141255 4 95 7.06E-30 T 09-03-2017 IPR011722 Hemimethylated DNA-binding domain GO:0003677 RG43_RS15760 b39bfa938221d3624fb3e59b2337251e 105 Hamap MF_01194 Heat shock protein HspQ [hspQ]. 1 105 37.369 T 09-03-2017 IPR022866 Heat shock protein HspQ RG43_RS15760 b39bfa938221d3624fb3e59b2337251e 105 TIGRFAM TIGR02097 yccV: hemimethylated DNA binding domain 4 102 3.8E-35 T 09-03-2017 IPR011722 Hemimethylated DNA-binding domain GO:0003677 RG43_RS22625 408cf5369cfd018aab68e18204ca5547 243 SUPERFAMILY SSF55315 2 76 5.18E-21 T 09-03-2017 IPR029064 50S ribosomal protein L30e-like RG43_RS22625 408cf5369cfd018aab68e18204ca5547 243 Pfam PF00588 SpoU rRNA Methylase family 96 236 1.5E-40 T 09-03-2017 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 RG43_RS22625 408cf5369cfd018aab68e18204ca5547 243 SUPERFAMILY SSF75217 68 242 3.2E-49 T 09-03-2017 IPR029028 Alpha/beta knot methyltransferases RG43_RS22625 408cf5369cfd018aab68e18204ca5547 243 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 1 242 9.3E-95 T 09-03-2017 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 RG43_RS22625 408cf5369cfd018aab68e18204ca5547 243 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 77 1.5E-18 T 09-03-2017 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 RG43_RS22625 408cf5369cfd018aab68e18204ca5547 243 Gene3D G3DSA:3.30.1330.30 1 76 1.5E-27 T 09-03-2017 IPR029064 50S ribosomal protein L30e-like RG43_RS22625 408cf5369cfd018aab68e18204ca5547 243 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 2 243 44.502 T 09-03-2017 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB RG43_RS22625 408cf5369cfd018aab68e18204ca5547 243 Gene3D G3DSA:3.40.1280.10 93 242 1.2E-54 T 09-03-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RG43_RS22625 408cf5369cfd018aab68e18204ca5547 243 SMART SM00967 4 80 3.9E-21 T 09-03-2017 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 RG43_RS06855 cbc71f42bfa9d5ba628fd0f044c0b4df 191 Gene3D G3DSA:1.10.1740.10 2 108 8.4E-38 T 09-03-2017 RG43_RS06855 cbc71f42bfa9d5ba628fd0f044c0b4df 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 183 6.8E-32 T 09-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS06855 cbc71f42bfa9d5ba628fd0f044c0b4df 191 SUPERFAMILY SSF88946 2 105 5.34E-32 T 09-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS06855 cbc71f42bfa9d5ba628fd0f044c0b4df 191 Gene3D G3DSA:1.10.10.10 122 187 5.2E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS06855 cbc71f42bfa9d5ba628fd0f044c0b4df 191 Pfam PF08281 Sigma-70, region 4 129 180 4.4E-19 T 09-03-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS06855 cbc71f42bfa9d5ba628fd0f044c0b4df 191 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 1 189 3.2E-99 T 09-03-2017 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS06855 cbc71f42bfa9d5ba628fd0f044c0b4df 191 Pfam PF04542 Sigma-70 region 2 25 91 4.2E-18 T 09-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS06855 cbc71f42bfa9d5ba628fd0f044c0b4df 191 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 46 77 - T 09-03-2017 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS06855 cbc71f42bfa9d5ba628fd0f044c0b4df 191 SUPERFAMILY SSF88659 122 183 9.53E-19 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS01260 6b2a918a2a5b817c9ca715d1d73ac9ef 1037 SUPERFAMILY SSF82693 672 722 1.12E-23 T 09-03-2017 RG43_RS01260 6b2a918a2a5b817c9ca715d1d73ac9ef 1037 SUPERFAMILY SSF82693 809 857 1.12E-23 T 09-03-2017 RG43_RS01260 6b2a918a2a5b817c9ca715d1d73ac9ef 1037 Gene3D G3DSA:1.10.3850.10 279 498 2.8E-57 T 09-03-2017 RG43_RS01260 6b2a918a2a5b817c9ca715d1d73ac9ef 1037 Gene3D G3DSA:1.10.3850.10 815 1028 2.9E-54 T 09-03-2017 RG43_RS01260 6b2a918a2a5b817c9ca715d1d73ac9ef 1037 Gene3D G3DSA:3.30.2090.10 722 810 9.6E-23 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RG43_RS01260 6b2a918a2a5b817c9ca715d1d73ac9ef 1037 Gene3D G3DSA:3.30.70.1430 38 139 5.2E-37 T 09-03-2017 RG43_RS01260 6b2a918a2a5b817c9ca715d1d73ac9ef 1037 SUPERFAMILY SSF82866 834 1026 9.68E-44 T 09-03-2017 RG43_RS01260 6b2a918a2a5b817c9ca715d1d73ac9ef 1037 SUPERFAMILY SSF82693 565 669 3.61E-29 T 09-03-2017 RG43_RS01260 6b2a918a2a5b817c9ca715d1d73ac9ef 1037 SUPERFAMILY SSF82693 135 182 2.35E-26 T 09-03-2017 RG43_RS01260 6b2a918a2a5b817c9ca715d1d73ac9ef 1037 SUPERFAMILY SSF82693 274 330 2.35E-26 T 09-03-2017 RG43_RS01260 6b2a918a2a5b817c9ca715d1d73ac9ef 1037 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1033 0.0 T 09-03-2017 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 RG43_RS01260 6b2a918a2a5b817c9ca715d1d73ac9ef 1037 SUPERFAMILY SSF82714 182 272 1.44E-20 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RG43_RS01260 6b2a918a2a5b817c9ca715d1d73ac9ef 1037 Pfam PF00873 AcrB/AcrD/AcrF family 1 1027 0.0 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS01260 6b2a918a2a5b817c9ca715d1d73ac9ef 1037 Gene3D G3DSA:3.30.70.1430 567 670 2.8E-36 T 09-03-2017 RG43_RS01260 6b2a918a2a5b817c9ca715d1d73ac9ef 1037 SUPERFAMILY SSF82693 38 132 3.3E-28 T 09-03-2017 RG43_RS01260 6b2a918a2a5b817c9ca715d1d73ac9ef 1037 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.9E-112 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS01260 6b2a918a2a5b817c9ca715d1d73ac9ef 1037 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 2.9E-112 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS01260 6b2a918a2a5b817c9ca715d1d73ac9ef 1037 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.9E-112 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS01260 6b2a918a2a5b817c9ca715d1d73ac9ef 1037 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 2.9E-112 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS01260 6b2a918a2a5b817c9ca715d1d73ac9ef 1037 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 2.9E-112 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS01260 6b2a918a2a5b817c9ca715d1d73ac9ef 1037 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 2.9E-112 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS01260 6b2a918a2a5b817c9ca715d1d73ac9ef 1037 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.9E-112 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS01260 6b2a918a2a5b817c9ca715d1d73ac9ef 1037 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.9E-112 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS01260 6b2a918a2a5b817c9ca715d1d73ac9ef 1037 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 2.9E-112 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS01260 6b2a918a2a5b817c9ca715d1d73ac9ef 1037 SUPERFAMILY SSF82866 296 497 6.28E-47 T 09-03-2017 RG43_RS01260 6b2a918a2a5b817c9ca715d1d73ac9ef 1037 Gene3D G3DSA:3.30.2090.10 181 275 3.9E-25 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RG43_RS01260 6b2a918a2a5b817c9ca715d1d73ac9ef 1037 SUPERFAMILY SSF82714 723 810 1.44E-18 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RG43_RS11625 dfe79e6e9dcaaa2a385a5850def3a1c9 375 SUPERFAMILY SSF47819 295 372 1.96E-24 T 09-03-2017 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 RG43_RS11625 dfe79e6e9dcaaa2a385a5850def3a1c9 375 SUPERFAMILY SSF47819 194 301 1.06E-29 T 09-03-2017 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 RG43_RS11625 dfe79e6e9dcaaa2a385a5850def3a1c9 375 TIGRFAM TIGR01388 rnd: ribonuclease D 5 372 1.1E-163 T 09-03-2017 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 RG43_RS11625 dfe79e6e9dcaaa2a385a5850def3a1c9 375 SMART SM00474 3 171 4.9E-55 T 09-03-2017 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 RG43_RS11625 dfe79e6e9dcaaa2a385a5850def3a1c9 375 Pfam PF00570 HRDC domain 213 279 1.2E-14 T 09-03-2017 IPR002121 HRDC domain GO:0003676|GO:0005622 RG43_RS11625 dfe79e6e9dcaaa2a385a5850def3a1c9 375 SUPERFAMILY SSF53098 2 210 1.95E-67 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS11625 dfe79e6e9dcaaa2a385a5850def3a1c9 375 SMART SM00341 210 289 3.3E-23 T 09-03-2017 IPR002121 HRDC domain GO:0003676|GO:0005622 RG43_RS11625 dfe79e6e9dcaaa2a385a5850def3a1c9 375 Hamap MF_01899 Ribonuclease D [rnd]. 3 371 44.96 T 09-03-2017 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 RG43_RS11625 dfe79e6e9dcaaa2a385a5850def3a1c9 375 Pfam PF01612 3'-5' exonuclease 3 169 5.8E-48 T 09-03-2017 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 RG43_RS11625 dfe79e6e9dcaaa2a385a5850def3a1c9 375 Gene3D G3DSA:3.30.420.10 2 172 2.6E-14 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS02115 b73b51aeb3f33621e51465626abf5c46 847 SUPERFAMILY SSF55124 502 627 5.72E-31 T 09-03-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RG43_RS02115 b73b51aeb3f33621e51465626abf5c46 847 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 292 3.4E-51 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS02115 b73b51aeb3f33621e51465626abf5c46 847 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 679 695 - T 09-03-2017 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RG43_RS02115 b73b51aeb3f33621e51465626abf5c46 847 SUPERFAMILY SSF51905 2 189 3.14E-39 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS02115 b73b51aeb3f33621e51465626abf5c46 847 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 3.8E-11 T 09-03-2017 RG43_RS02115 b73b51aeb3f33621e51465626abf5c46 847 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 3.8E-11 T 09-03-2017 RG43_RS02115 b73b51aeb3f33621e51465626abf5c46 847 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 3.8E-11 T 09-03-2017 RG43_RS02115 b73b51aeb3f33621e51465626abf5c46 847 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 105 114 3.8E-11 T 09-03-2017 RG43_RS02115 b73b51aeb3f33621e51465626abf5c46 847 Pfam PF04324 BFD-like [2Fe-2S] binding domain 424 471 8.3E-15 T 09-03-2017 IPR007419 BFD-like [2Fe-2S]-binding domain RG43_RS02115 b73b51aeb3f33621e51465626abf5c46 847 Gene3D G3DSA:3.50.50.60 106 309 3.9E-50 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS02115 b73b51aeb3f33621e51465626abf5c46 847 SUPERFAMILY SSF56014 633 808 1.57E-46 T 09-03-2017 RG43_RS02115 b73b51aeb3f33621e51465626abf5c46 847 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 560 622 1.0E-11 T 09-03-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RG43_RS02115 b73b51aeb3f33621e51465626abf5c46 847 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 4.1E-14 T 09-03-2017 RG43_RS02115 b73b51aeb3f33621e51465626abf5c46 847 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 4.1E-14 T 09-03-2017 RG43_RS02115 b73b51aeb3f33621e51465626abf5c46 847 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 4.1E-14 T 09-03-2017 RG43_RS02115 b73b51aeb3f33621e51465626abf5c46 847 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 4.1E-14 T 09-03-2017 RG43_RS02115 b73b51aeb3f33621e51465626abf5c46 847 PRINTS PR00397 Sirohaem Fe-binding site signature 679 697 1.3E-5 T 09-03-2017 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RG43_RS02115 b73b51aeb3f33621e51465626abf5c46 847 PRINTS PR00397 Sirohaem Fe-binding site signature 636 654 1.3E-5 T 09-03-2017 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RG43_RS02115 b73b51aeb3f33621e51465626abf5c46 847 SUPERFAMILY SSF51905 144 310 5.7E-28 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS02115 b73b51aeb3f33621e51465626abf5c46 847 Gene3D G3DSA:3.50.50.60 2 105 1.3E-23 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS02115 b73b51aeb3f33621e51465626abf5c46 847 Gene3D G3DSA:3.30.413.10 634 768 1.7E-30 T 09-03-2017 RG43_RS02115 b73b51aeb3f33621e51465626abf5c46 847 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 633 757 7.1E-15 T 09-03-2017 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RG43_RS02115 b73b51aeb3f33621e51465626abf5c46 847 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 801 0.0 T 09-03-2017 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 RG43_RS02115 b73b51aeb3f33621e51465626abf5c46 847 PIRSF PIRSF037149 1 835 0.0 T 09-03-2017 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 RG43_RS11455 b89972f7b70346a6ffd6915ae7d9e200 293 Hamap MF_00188 Protease HtpX [htpX]. 1 289 27.11 T 09-03-2017 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 RG43_RS11455 b89972f7b70346a6ffd6915ae7d9e200 293 Pfam PF01435 Peptidase family M48 73 288 3.1E-39 T 09-03-2017 IPR001915 Peptidase M48 GO:0004222|GO:0006508 RG43_RS11455 b89972f7b70346a6ffd6915ae7d9e200 293 Gene3D G3DSA:3.30.2010.10 69 156 4.4E-32 T 09-03-2017 RG43_RS15385 afffccf5eb53997c8ae631a30c1bbb83 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 3.1E-13 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS15385 afffccf5eb53997c8ae631a30c1bbb83 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 3.1E-13 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS15385 afffccf5eb53997c8ae631a30c1bbb83 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 3.1E-13 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS15385 afffccf5eb53997c8ae631a30c1bbb83 216 Gene3D G3DSA:1.10.10.10 142 212 4.7E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS15385 afffccf5eb53997c8ae631a30c1bbb83 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 210 1.8E-20 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS15385 afffccf5eb53997c8ae631a30c1bbb83 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 170 197 - T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS15385 afffccf5eb53997c8ae631a30c1bbb83 216 SUPERFAMILY SSF46894 148 212 2.75E-19 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RG43_RS15385 afffccf5eb53997c8ae631a30c1bbb83 216 SMART SM00421 153 210 1.8E-23 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS08095 09e43319d398d37fe204351b9da69c31 168 Gene3D G3DSA:2.60.40.1090 42 168 6.3E-6 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS08095 09e43319d398d37fe204351b9da69c31 168 SUPERFAMILY SSF49401 41 168 9.44E-25 T 09-03-2017 IPR008966 Adhesion domain RG43_RS08095 09e43319d398d37fe204351b9da69c31 168 Pfam PF00419 Fimbrial protein 39 168 3.0E-16 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS10575 cbf93e21d3afc87abf1ce76daf341f6e 182 PRINTS PR00183 E.coli/Salmonella-type porin signature 62 79 7.1E-14 T 09-03-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 RG43_RS10575 cbf93e21d3afc87abf1ce76daf341f6e 182 PRINTS PR00183 E.coli/Salmonella-type porin signature 90 109 7.1E-14 T 09-03-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 RG43_RS10575 cbf93e21d3afc87abf1ce76daf341f6e 182 SUPERFAMILY SSF56935 8 182 3.43E-32 T 09-03-2017 RG43_RS10575 cbf93e21d3afc87abf1ce76daf341f6e 182 Pfam PF00267 Gram-negative porin 13 182 6.5E-53 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RG43_RS10575 cbf93e21d3afc87abf1ce76daf341f6e 182 Gene3D G3DSA:2.40.160.10 10 182 2.3E-41 T 09-03-2017 IPR023614 Porin domain RG43_RS15155 0ec3de5ec28734283c0227b26c7544d3 317 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 141 2.0E-37 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 RG43_RS15155 0ec3de5ec28734283c0227b26c7544d3 317 Gene3D G3DSA:1.20.1330.10 217 260 1.3E-21 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 RG43_RS15155 0ec3de5ec28734283c0227b26c7544d3 317 Gene3D G3DSA:1.20.1330.10 69 174 1.3E-21 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 RG43_RS15155 0ec3de5ec28734283c0227b26c7544d3 317 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 192 3.0E-72 T 09-03-2017 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 RG43_RS15155 0ec3de5ec28734283c0227b26c7544d3 317 SUPERFAMILY SSF64518 1 315 1.14E-62 T 09-03-2017 RG43_RS00470 80820c0ccf6c3981884b6a92a600793f 693 SUPERFAMILY SSF50249 9 176 1.58E-42 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS00470 80820c0ccf6c3981884b6a92a600793f 693 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 29 664 4.5E-252 T 09-03-2017 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 RG43_RS00470 80820c0ccf6c3981884b6a92a600793f 693 Pfam PF00271 Helicase conserved C-terminal domain 481 588 1.8E-18 T 09-03-2017 IPR001650 Helicase, C-terminal RG43_RS00470 80820c0ccf6c3981884b6a92a600793f 693 Gene3D G3DSA:1.10.150.20 5 37 2.7E-4 T 09-03-2017 RG43_RS00470 80820c0ccf6c3981884b6a92a600793f 693 SMART SM00487 265 459 1.7E-31 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain RG43_RS00470 80820c0ccf6c3981884b6a92a600793f 693 Pfam PF00270 DEAD/DEAH box helicase 273 433 7.4E-19 T 09-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RG43_RS00470 80820c0ccf6c3981884b6a92a600793f 693 SUPERFAMILY SSF52540 508 653 1.3E-44 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS00470 80820c0ccf6c3981884b6a92a600793f 693 SUPERFAMILY SSF52540 292 342 1.3E-44 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS00470 80820c0ccf6c3981884b6a92a600793f 693 Gene3D G3DSA:3.40.50.300 254 453 1.2E-55 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS00470 80820c0ccf6c3981884b6a92a600793f 693 Pfam PF17191 RecG wedge domain 14 171 3.9E-21 T 09-03-2017 IPR033454 RecG, wedge domain RG43_RS00470 80820c0ccf6c3981884b6a92a600793f 693 SMART SM00490 505 589 4.4E-22 T 09-03-2017 IPR001650 Helicase, C-terminal RG43_RS00470 80820c0ccf6c3981884b6a92a600793f 693 Gene3D G3DSA:3.40.50.300 454 638 8.2E-42 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS00470 80820c0ccf6c3981884b6a92a600793f 693 Gene3D G3DSA:2.40.50.140 47 138 1.8E-30 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS00470 80820c0ccf6c3981884b6a92a600793f 693 SUPERFAMILY SSF52540 206 453 5.43E-59 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS15630 12d246d8816a6232049dfe3015021a51 76 Pfam PF15939 Putative antitoxin of bacterial toxin-antitoxin system 1 76 1.1E-56 T 09-03-2017 IPR031853 Putative antitoxin YmcE RG43_RS22080 d3d9bf46733916d6a5a61f9929cd8ffc 200 SUPERFAMILY SSF56349 7 190 2.85E-42 T 09-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RG43_RS22080 d3d9bf46733916d6a5a61f9929cd8ffc 200 Gene3D G3DSA:1.10.443.10 12 179 3.9E-38 T 09-03-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RG43_RS22080 d3d9bf46733916d6a5a61f9929cd8ffc 200 Pfam PF00589 Phage integrase family 12 180 1.0E-50 T 09-03-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RG43_RS21630 856a0abd3d7df46f2348dfd5e2ec41c5 460 SUPERFAMILY SSF52540 71 291 1.76E-49 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS21630 856a0abd3d7df46f2348dfd5e2ec41c5 460 SMART SM00382 94 248 3.3E-8 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS21630 856a0abd3d7df46f2348dfd5e2ec41c5 460 Pfam PF13481 AAA domain 88 225 4.6E-15 T 09-03-2017 RG43_RS21630 856a0abd3d7df46f2348dfd5e2ec41c5 460 PRINTS PR01874 DNA repair protein radA signature 127 144 1.9E-93 T 09-03-2017 RG43_RS21630 856a0abd3d7df46f2348dfd5e2ec41c5 460 PRINTS PR01874 DNA repair protein radA signature 216 244 1.9E-93 T 09-03-2017 RG43_RS21630 856a0abd3d7df46f2348dfd5e2ec41c5 460 PRINTS PR01874 DNA repair protein radA signature 325 348 1.9E-93 T 09-03-2017 RG43_RS21630 856a0abd3d7df46f2348dfd5e2ec41c5 460 PRINTS PR01874 DNA repair protein radA signature 177 201 1.9E-93 T 09-03-2017 RG43_RS21630 856a0abd3d7df46f2348dfd5e2ec41c5 460 PRINTS PR01874 DNA repair protein radA signature 11 35 1.9E-93 T 09-03-2017 RG43_RS21630 856a0abd3d7df46f2348dfd5e2ec41c5 460 PRINTS PR01874 DNA repair protein radA signature 86 114 1.9E-93 T 09-03-2017 RG43_RS21630 856a0abd3d7df46f2348dfd5e2ec41c5 460 PRINTS PR01874 DNA repair protein radA signature 251 277 1.9E-93 T 09-03-2017 RG43_RS21630 856a0abd3d7df46f2348dfd5e2ec41c5 460 SUPERFAMILY SSF54211 258 272 1.33E-41 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold RG43_RS21630 856a0abd3d7df46f2348dfd5e2ec41c5 460 SUPERFAMILY SSF54211 306 457 1.33E-41 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold RG43_RS21630 856a0abd3d7df46f2348dfd5e2ec41c5 460 Gene3D G3DSA:3.30.230.10 288 456 1.5E-38 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RG43_RS21630 856a0abd3d7df46f2348dfd5e2ec41c5 460 Pfam PF13541 Subunit ChlI of Mg-chelatase 348 433 1.7E-9 T 09-03-2017 RG43_RS21630 856a0abd3d7df46f2348dfd5e2ec41c5 460 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 454 5.4E-240 T 09-03-2017 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 RG43_RS21630 856a0abd3d7df46f2348dfd5e2ec41c5 460 Hamap MF_01498 DNA repair protein RadA [radA]. 22 458 43.368 T 09-03-2017 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 RG43_RS21630 856a0abd3d7df46f2348dfd5e2ec41c5 460 Gene3D G3DSA:3.40.50.300 62 280 3.3E-54 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16530 72687302febc400acb6aaa54e09d2bef 306 Pfam PF03734 L,D-transpeptidase catalytic domain 101 231 3.1E-17 T 09-03-2017 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 RG43_RS16530 72687302febc400acb6aaa54e09d2bef 306 SUPERFAMILY SSF141523 177 233 5.1E-26 T 09-03-2017 RG43_RS16530 72687302febc400acb6aaa54e09d2bef 306 SUPERFAMILY SSF141523 99 149 5.1E-26 T 09-03-2017 RG43_RS16530 72687302febc400acb6aaa54e09d2bef 306 Gene3D G3DSA:2.40.440.10 93 233 2.0E-33 T 09-03-2017 RG43_RS22055 46524d73edb61babbeda9f9e6f6734dc 241 PRINTS PR00969 Pili chaperone signature 173 188 2.2E-36 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS22055 46524d73edb61babbeda9f9e6f6734dc 241 PRINTS PR00969 Pili chaperone signature 138 153 2.2E-36 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS22055 46524d73edb61babbeda9f9e6f6734dc 241 PRINTS PR00969 Pili chaperone signature 38 47 2.2E-36 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS22055 46524d73edb61babbeda9f9e6f6734dc 241 PRINTS PR00969 Pili chaperone signature 83 104 2.2E-36 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS22055 46524d73edb61babbeda9f9e6f6734dc 241 PRINTS PR00969 Pili chaperone signature 112 129 2.2E-36 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS22055 46524d73edb61babbeda9f9e6f6734dc 241 Gene3D G3DSA:2.60.40.1070 160 238 1.8E-26 T 09-03-2017 IPR016148 Pili assembly chaperone, C-terminal RG43_RS22055 46524d73edb61babbeda9f9e6f6734dc 241 Gene3D G3DSA:2.60.40.360 37 157 1.1E-45 T 09-03-2017 IPR008962 PapD-like RG43_RS22055 46524d73edb61babbeda9f9e6f6734dc 241 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 37 156 3.5E-38 T 09-03-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 RG43_RS22055 46524d73edb61babbeda9f9e6f6734dc 241 SUPERFAMILY SSF49354 37 156 1.75E-40 T 09-03-2017 IPR008962 PapD-like RG43_RS22055 46524d73edb61babbeda9f9e6f6734dc 241 SUPERFAMILY SSF49584 151 236 1.96E-20 T 09-03-2017 IPR016148 Pili assembly chaperone, C-terminal RG43_RS22055 46524d73edb61babbeda9f9e6f6734dc 241 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 180 233 7.9E-11 T 09-03-2017 IPR016148 Pili assembly chaperone, C-terminal RG43_RS22055 46524d73edb61babbeda9f9e6f6734dc 241 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 111 128 - T 09-03-2017 IPR018046 Pili assembly chaperone, conserved site RG43_RS12125 c9099c3e6482121257d01413b31b0d27 566 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 09-03-2017 IPR020845 AMP-binding, conserved site RG43_RS12125 c9099c3e6482121257d01413b31b0d27 566 Pfam PF13193 AMP-binding enzyme C-terminal domain 466 543 1.3E-18 T 09-03-2017 IPR025110 AMP-binding enzyme C-terminal domain RG43_RS12125 c9099c3e6482121257d01413b31b0d27 566 Gene3D G3DSA:2.30.38.10 377 451 3.9E-24 T 09-03-2017 RG43_RS12125 c9099c3e6482121257d01413b31b0d27 566 Gene3D G3DSA:3.40.50.980 217 367 9.8E-38 T 09-03-2017 RG43_RS12125 c9099c3e6482121257d01413b31b0d27 566 Pfam PF00501 AMP-binding enzyme 49 457 6.3E-100 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RG43_RS12125 c9099c3e6482121257d01413b31b0d27 566 Gene3D G3DSA:3.30.300.30 452 551 5.6E-30 T 09-03-2017 RG43_RS12125 c9099c3e6482121257d01413b31b0d27 566 Gene3D G3DSA:3.40.50.980 43 216 2.5E-33 T 09-03-2017 RG43_RS12125 c9099c3e6482121257d01413b31b0d27 566 SUPERFAMILY SSF56801 42 553 8.24E-143 T 09-03-2017 RG43_RS09645 e480da4a49e7a6859ae32bd32c3436ed 361 Gene3D G3DSA:3.40.640.10 32 249 5.1E-53 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS09645 e480da4a49e7a6859ae32bd32c3436ed 361 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 207 216 - T 09-03-2017 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 RG43_RS09645 e480da4a49e7a6859ae32bd32c3436ed 361 Pfam PF00155 Aminotransferase class I and II 20 347 9.5E-44 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RG43_RS09645 e480da4a49e7a6859ae32bd32c3436ed 361 SUPERFAMILY SSF53383 13 351 9.11E-62 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS09645 e480da4a49e7a6859ae32bd32c3436ed 361 Gene3D G3DSA:3.90.1150.10 250 352 3.2E-15 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RG43_RS24820 0d6a7c3447ee525d69045d05cac0fbd8 260 SUPERFAMILY SSF51556 1 258 7.01E-86 T 09-03-2017 IPR032466 Metal-dependent hydrolase RG43_RS24820 0d6a7c3447ee525d69045d05cac0fbd8 260 PIRSF PIRSF005902 1 260 6.6E-78 T 09-03-2017 IPR001130 TatD family GO:0016788 RG43_RS24820 0d6a7c3447ee525d69045d05cac0fbd8 260 Hamap MF_00901 3'-5' ssDNA/RNA exonuclease TatD [tatD]. 1 259 65.691 T 09-03-2017 IPR024918 3'-5' ssDNA/RNA exonuclease TatD GO:0008408 RG43_RS24820 0d6a7c3447ee525d69045d05cac0fbd8 260 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 123 133 - T 09-03-2017 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 RG43_RS24820 0d6a7c3447ee525d69045d05cac0fbd8 260 Gene3D G3DSA:3.20.20.140 1 258 2.5E-87 T 09-03-2017 RG43_RS24820 0d6a7c3447ee525d69045d05cac0fbd8 260 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 189 205 - T 09-03-2017 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 RG43_RS24820 0d6a7c3447ee525d69045d05cac0fbd8 260 Pfam PF01026 TatD related DNase 2 256 1.9E-70 T 09-03-2017 IPR001130 TatD family GO:0016788 RG43_RS16160 662339ec6fe65383091411c0d2eff801 573 Pfam PF00005 ABC transporter 356 502 8.9E-35 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS16160 662339ec6fe65383091411c0d2eff801 573 Gene3D G3DSA:3.40.50.300 339 568 6.0E-75 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16160 662339ec6fe65383091411c0d2eff801 573 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 6 533 1.4E-181 T 09-03-2017 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0006810|GO:0016021|GO:0042626 RG43_RS16160 662339ec6fe65383091411c0d2eff801 573 SUPERFAMILY SSF52540 333 569 2.61E-74 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16160 662339ec6fe65383091411c0d2eff801 573 SMART SM00382 365 549 9.0E-17 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS16160 662339ec6fe65383091411c0d2eff801 573 Gene3D G3DSA:1.20.1560.10 8 327 1.1E-30 T 09-03-2017 RG43_RS16160 662339ec6fe65383091411c0d2eff801 573 SUPERFAMILY SSF90123 7 327 3.79E-42 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RG43_RS16160 662339ec6fe65383091411c0d2eff801 573 Pfam PF00664 ABC transporter transmembrane region 58 287 1.4E-10 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RG43_RS16160 662339ec6fe65383091411c0d2eff801 573 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS25250 f66c97e6175f0d1ba736c1eef30984c1 494 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 2 494 55.205 T 09-03-2017 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 RG43_RS25250 f66c97e6175f0d1ba736c1eef30984c1 494 PIRSF PIRSF001267 1 494 4.7E-188 T 09-03-2017 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 RG43_RS25250 f66c97e6175f0d1ba736c1eef30984c1 494 Pfam PF02541 Ppx/GppA phosphatase family 21 301 3.9E-103 T 09-03-2017 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 RG43_RS25250 f66c97e6175f0d1ba736c1eef30984c1 494 SUPERFAMILY SSF53067 132 300 6.29E-41 T 09-03-2017 RG43_RS25250 f66c97e6175f0d1ba736c1eef30984c1 494 Gene3D G3DSA:3.30.420.150 128 300 9.0E-52 T 09-03-2017 RG43_RS25250 f66c97e6175f0d1ba736c1eef30984c1 494 Gene3D G3DSA:3.30.420.40 4 127 3.0E-45 T 09-03-2017 RG43_RS25250 f66c97e6175f0d1ba736c1eef30984c1 494 SUPERFAMILY SSF53067 7 128 2.72E-37 T 09-03-2017 RG43_RS25250 f66c97e6175f0d1ba736c1eef30984c1 494 SUPERFAMILY SSF109604 307 493 2.51E-46 T 09-03-2017 RG43_RS00355 f710d107890e5ff4b85d01f28cf3cdf0 141 Pfam PF01527 Transposase 10 65 1.1E-12 T 09-03-2017 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RG43_RS00355 f710d107890e5ff4b85d01f28cf3cdf0 141 Gene3D G3DSA:1.10.10.60 15 69 8.8E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS00355 f710d107890e5ff4b85d01f28cf3cdf0 141 SUPERFAMILY SSF46689 10 62 3.4E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS19700 f710d107890e5ff4b85d01f28cf3cdf0 141 Pfam PF01527 Transposase 10 65 1.1E-12 T 09-03-2017 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RG43_RS19700 f710d107890e5ff4b85d01f28cf3cdf0 141 Gene3D G3DSA:1.10.10.60 15 69 8.8E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS19700 f710d107890e5ff4b85d01f28cf3cdf0 141 SUPERFAMILY SSF46689 10 62 3.4E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS15920 cf4921f4878bf185880fc46eb24f1a99 400 PIRSF PIRSF000484 1 397 5.1E-62 T 09-03-2017 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 RG43_RS15920 cf4921f4878bf185880fc46eb24f1a99 400 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 8 394 7.2E-187 T 09-03-2017 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 RG43_RS15920 cf4921f4878bf185880fc46eb24f1a99 400 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 169 394 5.4E-85 T 09-03-2017 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 RG43_RS15920 cf4921f4878bf185880fc46eb24f1a99 400 SUPERFAMILY SSF54675 2 138 3.24E-43 T 09-03-2017 RG43_RS15920 cf4921f4878bf185880fc46eb24f1a99 400 SUPERFAMILY SSF51690 120 392 4.51E-87 T 09-03-2017 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 RG43_RS15920 cf4921f4878bf185880fc46eb24f1a99 400 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 5 395 51.23 T 09-03-2017 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 RG43_RS15920 cf4921f4878bf185880fc46eb24f1a99 400 Gene3D G3DSA:3.20.140.10 3 376 2.4E-146 T 09-03-2017 RG43_RS06485 eec32e697af893da4138b248ed1611b5 330 Gene3D G3DSA:3.40.190.10 23 112 1.1E-58 T 09-03-2017 RG43_RS06485 eec32e697af893da4138b248ed1611b5 330 Gene3D G3DSA:3.40.190.10 263 329 1.1E-58 T 09-03-2017 RG43_RS06485 eec32e697af893da4138b248ed1611b5 330 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 30 312 8.7E-57 T 09-03-2017 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 RG43_RS06485 eec32e697af893da4138b248ed1611b5 330 SUPERFAMILY SSF53850 24 328 1.69E-97 T 09-03-2017 RG43_RS06485 eec32e697af893da4138b248ed1611b5 330 Gene3D G3DSA:3.40.190.100 113 262 3.5E-58 T 09-03-2017 RG43_RS06030 6d4945b4b5915b02ba14af1e71c14780 244 PIRSF PIRSF000857 6 244 2.1E-54 T 09-03-2017 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 RG43_RS06030 6d4945b4b5915b02ba14af1e71c14780 244 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 48 219 9.4E-52 T 09-03-2017 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 RG43_RS06030 6d4945b4b5915b02ba14af1e71c14780 244 Gene3D G3DSA:3.40.50.620 10 216 2.4E-63 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS06030 6d4945b4b5915b02ba14af1e71c14780 244 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 33 243 3.3E-96 T 09-03-2017 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 RG43_RS06030 6d4945b4b5915b02ba14af1e71c14780 244 SUPERFAMILY SSF52402 21 208 1.07E-52 T 09-03-2017 RG43_RS06030 6d4945b4b5915b02ba14af1e71c14780 244 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 9 243 40.557 T 09-03-2017 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 RG43_RS06030 6d4945b4b5915b02ba14af1e71c14780 244 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 21 242 2.5E-104 T 09-03-2017 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 RG43_RS16745 1d192ad9a2cf2749c9862f362feb18bc 170 Pfam PF00994 Probable molybdopterin binding domain 14 156 1.4E-32 T 09-03-2017 IPR001453 MoaB/Mog domain RG43_RS16745 1d192ad9a2cf2749c9862f362feb18bc 170 PIRSF PIRSF006443 1 166 1.6E-62 T 09-03-2017 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 RG43_RS16745 1d192ad9a2cf2749c9862f362feb18bc 170 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 12 153 1.9E-39 T 09-03-2017 IPR001453 MoaB/Mog domain RG43_RS16745 1d192ad9a2cf2749c9862f362feb18bc 170 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 7 169 2.7E-83 T 09-03-2017 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 RG43_RS16745 1d192ad9a2cf2749c9862f362feb18bc 170 Gene3D G3DSA:3.40.980.10 8 169 4.9E-51 T 09-03-2017 IPR001453 MoaB/Mog domain RG43_RS16745 1d192ad9a2cf2749c9862f362feb18bc 170 SMART SM00852 14 158 3.3E-30 T 09-03-2017 IPR001453 MoaB/Mog domain RG43_RS16745 1d192ad9a2cf2749c9862f362feb18bc 170 SUPERFAMILY SSF53218 7 168 1.3E-46 T 09-03-2017 IPR001453 MoaB/Mog domain RG43_RS16745 1d192ad9a2cf2749c9862f362feb18bc 170 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 72 85 - T 09-03-2017 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 RG43_RS11130 dabcf7fa2213e7eb9409a93d0890a8e5 247 Pfam PF13649 Methyltransferase domain 60 158 3.7E-14 T 09-03-2017 RG43_RS11130 dabcf7fa2213e7eb9409a93d0890a8e5 247 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 3 242 42.968 T 09-03-2017 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 RG43_RS11130 dabcf7fa2213e7eb9409a93d0890a8e5 247 PIRSF PIRSF006325 1 243 3.8E-135 T 09-03-2017 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 RG43_RS11130 dabcf7fa2213e7eb9409a93d0890a8e5 247 SUPERFAMILY SSF53335 20 242 1.09E-39 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS11130 dabcf7fa2213e7eb9409a93d0890a8e5 247 Gene3D G3DSA:3.40.50.150 19 241 6.0E-65 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS11130 dabcf7fa2213e7eb9409a93d0890a8e5 247 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 4 242 4.8E-137 T 09-03-2017 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 RG43_RS24890 8fc0f39d608f014474968ffb90e60976 254 Gene3D G3DSA:3.40.50.1580 5 252 9.6E-85 T 09-03-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RG43_RS24890 8fc0f39d608f014474968ffb90e60976 254 Pfam PF01048 Phosphorylase superfamily 21 250 1.1E-40 T 09-03-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RG43_RS24890 8fc0f39d608f014474968ffb90e60976 254 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 6 253 6.9E-133 T 09-03-2017 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3 RG43_RS24890 8fc0f39d608f014474968ffb90e60976 254 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 66 81 - T 09-03-2017 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 RG43_RS24890 8fc0f39d608f014474968ffb90e60976 254 SUPERFAMILY SSF53167 6 250 6.55E-73 T 09-03-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RG43_RS24060 0baff22a7707b086f9426e9430bc845f 286 Gene3D G3DSA:2.40.230.20 29 286 1.2E-88 T 09-03-2017 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 RG43_RS24060 0baff22a7707b086f9426e9430bc845f 286 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 29 286 1.7E-69 T 09-03-2017 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 RG43_RS24060 0baff22a7707b086f9426e9430bc845f 286 SUPERFAMILY SSF111364 29 286 1.1E-79 T 09-03-2017 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 RG43_RS24060 0baff22a7707b086f9426e9430bc845f 286 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 147 172 7.4E-82 T 09-03-2017 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 RG43_RS24060 0baff22a7707b086f9426e9430bc845f 286 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 232 251 7.4E-82 T 09-03-2017 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 RG43_RS24060 0baff22a7707b086f9426e9430bc845f 286 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 179 202 7.4E-82 T 09-03-2017 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 RG43_RS24060 0baff22a7707b086f9426e9430bc845f 286 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 112 132 7.4E-82 T 09-03-2017 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 RG43_RS24060 0baff22a7707b086f9426e9430bc845f 286 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 86 107 7.4E-82 T 09-03-2017 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 RG43_RS24060 0baff22a7707b086f9426e9430bc845f 286 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 262 285 7.4E-82 T 09-03-2017 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 RG43_RS24060 0baff22a7707b086f9426e9430bc845f 286 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 24 46 7.4E-82 T 09-03-2017 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 RG43_RS24060 0baff22a7707b086f9426e9430bc845f 286 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 51 75 7.4E-82 T 09-03-2017 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 RG43_RS10620 6caa2e23ebb95134310ffb768cf306ab 156 TIGRFAM TIGR00632 vsr: DNA mismatch endonuclease Vsr 1 118 7.1E-55 T 09-03-2017 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 RG43_RS10620 6caa2e23ebb95134310ffb768cf306ab 156 Pfam PF03852 DNA mismatch endonuclease Vsr 2 74 1.1E-39 T 09-03-2017 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 RG43_RS10620 6caa2e23ebb95134310ffb768cf306ab 156 SUPERFAMILY SSF52980 2 153 1.23E-54 T 09-03-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 RG43_RS10620 6caa2e23ebb95134310ffb768cf306ab 156 Gene3D G3DSA:3.40.960.10 21 154 3.4E-51 T 09-03-2017 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 RG43_RS10620 6caa2e23ebb95134310ffb768cf306ab 156 PIRSF PIRSF018267 1 150 1.7E-51 T 09-03-2017 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 RG43_RS08960 18b5305332c73bea91687f9059d5295d 563 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 107 190 7.1E-40 T 09-03-2017 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 RG43_RS08960 18b5305332c73bea91687f9059d5295d 563 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 213 552 7.1E-151 T 09-03-2017 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 RG43_RS08960 18b5305332c73bea91687f9059d5295d 563 SUPERFAMILY SSF52794 4 88 1.62E-9 T 09-03-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RG43_RS08960 18b5305332c73bea91687f9059d5295d 563 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 108 194 1.4E-18 T 09-03-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RG43_RS08960 18b5305332c73bea91687f9059d5295d 563 SUPERFAMILY SSF52794 105 206 3.84E-35 T 09-03-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RG43_RS08960 18b5305332c73bea91687f9059d5295d 563 Gene3D G3DSA:3.40.50.2300 102 206 2.3E-42 T 09-03-2017 RG43_RS08960 18b5305332c73bea91687f9059d5295d 563 Pfam PF02378 Phosphotransferase system, EIIC 233 496 3.9E-19 T 09-03-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 RG43_RS02520 e0f4ed179f0a3401ddb71db11ff9c90f 315 Pfam PF00551 Formyl transferase 6 183 9.9E-56 T 09-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RG43_RS02520 e0f4ed179f0a3401ddb71db11ff9c90f 315 Gene3D G3DSA:3.10.25.10 210 306 9.8E-39 T 09-03-2017 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RG43_RS02520 e0f4ed179f0a3401ddb71db11ff9c90f 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 307 37.877 T 09-03-2017 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 RG43_RS02520 e0f4ed179f0a3401ddb71db11ff9c90f 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 304 1.0E-32 T 09-03-2017 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RG43_RS02520 e0f4ed179f0a3401ddb71db11ff9c90f 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 09-03-2017 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RG43_RS02520 e0f4ed179f0a3401ddb71db11ff9c90f 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 312 1.0E-126 T 09-03-2017 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 RG43_RS02520 e0f4ed179f0a3401ddb71db11ff9c90f 315 Gene3D G3DSA:3.40.50.170 4 208 6.4E-75 T 09-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RG43_RS02520 e0f4ed179f0a3401ddb71db11ff9c90f 315 SUPERFAMILY SSF50486 208 309 6.12E-38 T 09-03-2017 IPR011034 Formyl transferase, C-terminal-like GO:0003824 RG43_RS02520 e0f4ed179f0a3401ddb71db11ff9c90f 315 SUPERFAMILY SSF53328 5 207 7.72E-68 T 09-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RG43_RS15750 874218cfe6030757b79195eeea22b2ed 92 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 09-03-2017 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RG43_RS15750 874218cfe6030757b79195eeea22b2ed 92 Hamap MF_01450 Acylphosphatase [yccX]. 2 92 31.942 T 09-03-2017 IPR028627 Acylphosphatase, bacteria GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RG43_RS15750 874218cfe6030757b79195eeea22b2ed 92 Gene3D G3DSA:3.30.70.100 5 92 8.6E-33 T 09-03-2017 RG43_RS15750 874218cfe6030757b79195eeea22b2ed 92 PRINTS PR00112 Acylphosphatase signature 26 51 2.5E-8 T 09-03-2017 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RG43_RS15750 874218cfe6030757b79195eeea22b2ed 92 PRINTS PR00112 Acylphosphatase signature 5 20 2.5E-8 T 09-03-2017 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RG43_RS15750 874218cfe6030757b79195eeea22b2ed 92 PRINTS PR00112 Acylphosphatase signature 61 81 2.5E-8 T 09-03-2017 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RG43_RS15750 874218cfe6030757b79195eeea22b2ed 92 SUPERFAMILY SSF54975 2 92 1.37E-30 T 09-03-2017 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RG43_RS15750 874218cfe6030757b79195eeea22b2ed 92 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 09-03-2017 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RG43_RS15750 874218cfe6030757b79195eeea22b2ed 92 Pfam PF00708 Acylphosphatase 8 92 7.7E-27 T 09-03-2017 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RG43_RS09290 c749f55d4a63d4c89c3456ff92904b13 826 Pfam PF13953 PapC C-terminal domain 753 813 3.0E-9 T 09-03-2017 IPR025949 PapC-like, C-terminal domain RG43_RS09290 c749f55d4a63d4c89c3456ff92904b13 826 Pfam PF00577 Outer membrane usher protein 177 743 4.0E-189 T 09-03-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 RG43_RS09290 c749f55d4a63d4c89c3456ff92904b13 826 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 289 299 - T 09-03-2017 IPR018030 Fimbrial membrane usher, conserved site RG43_RS09290 c749f55d4a63d4c89c3456ff92904b13 826 SUPERFAMILY SSF141729 49 153 1.16E-26 T 09-03-2017 RG43_RS09290 c749f55d4a63d4c89c3456ff92904b13 826 Pfam PF13954 PapC N-terminal domain 26 161 7.3E-32 T 09-03-2017 IPR025885 PapC, N-terminal domain GO:0005515 RG43_RS19225 b2f4ad6e90d2e5e97186442d5ac0e9e6 403 SUPERFAMILY SSF103473 8 396 2.09E-67 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS19225 b2f4ad6e90d2e5e97186442d5ac0e9e6 403 Gene3D G3DSA:1.20.1250.20 17 193 1.6E-27 T 09-03-2017 RG43_RS19225 b2f4ad6e90d2e5e97186442d5ac0e9e6 403 Gene3D G3DSA:1.20.1250.20 217 402 1.4E-20 T 09-03-2017 RG43_RS19225 b2f4ad6e90d2e5e97186442d5ac0e9e6 403 ProSitePatterns PS00217 Sugar transport proteins signature 2. 112 137 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RG43_RS19225 b2f4ad6e90d2e5e97186442d5ac0e9e6 403 ProSitePatterns PS00216 Sugar transport proteins signature 1. 70 86 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RG43_RS19225 b2f4ad6e90d2e5e97186442d5ac0e9e6 403 Pfam PF07690 Major Facilitator Superfamily 21 301 1.8E-36 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS10470 8061c50825641ec480cf733911039462 234 SMART SM00409 154 234 0.0059 T 09-03-2017 IPR003599 Immunoglobulin subtype RG43_RS10470 8061c50825641ec480cf733911039462 234 Gene3D G3DSA:2.60.40.10 118 233 7.4E-10 T 09-03-2017 IPR013783 Immunoglobulin-like fold RG43_RS10470 8061c50825641ec480cf733911039462 234 SUPERFAMILY SSF48726 155 233 2.33E-8 T 09-03-2017 IPR007110 Immunoglobulin-like domain GO:0005515 RG43_RS06020 3995d4fdc61d6f7b62e874ed85728d73 599 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 2 599 53.121 T 09-03-2017 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RG43_RS06020 3995d4fdc61d6f7b62e874ed85728d73 599 Gene3D G3DSA:3.40.50.360 56 211 3.4E-47 T 09-03-2017 IPR029039 Flavoprotein-like domain RG43_RS06020 3995d4fdc61d6f7b62e874ed85728d73 599 Pfam PF00258 Flavodoxin 66 191 5.1E-32 T 09-03-2017 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 RG43_RS06020 3995d4fdc61d6f7b62e874ed85728d73 599 PIRSF PIRSF000207 1 599 2.8E-283 T 09-03-2017 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RG43_RS06020 3995d4fdc61d6f7b62e874ed85728d73 599 Gene3D G3DSA:2.40.30.10 229 280 2.7E-40 T 09-03-2017 RG43_RS06020 3995d4fdc61d6f7b62e874ed85728d73 599 Gene3D G3DSA:2.40.30.10 384 454 2.7E-40 T 09-03-2017 RG43_RS06020 3995d4fdc61d6f7b62e874ed85728d73 599 PRINTS PR00369 Flavodoxin signature 169 188 5.0E-14 T 09-03-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 RG43_RS06020 3995d4fdc61d6f7b62e874ed85728d73 599 PRINTS PR00369 Flavodoxin signature 113 124 5.0E-14 T 09-03-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 RG43_RS06020 3995d4fdc61d6f7b62e874ed85728d73 599 PRINTS PR00369 Flavodoxin signature 145 155 5.0E-14 T 09-03-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 RG43_RS06020 3995d4fdc61d6f7b62e874ed85728d73 599 PRINTS PR00369 Flavodoxin signature 65 78 5.0E-14 T 09-03-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 RG43_RS06020 3995d4fdc61d6f7b62e874ed85728d73 599 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 10 599 1.8E-289 T 09-03-2017 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RG43_RS06020 3995d4fdc61d6f7b62e874ed85728d73 599 Pfam PF00667 FAD binding domain 230 424 3.4E-28 T 09-03-2017 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 RG43_RS06020 3995d4fdc61d6f7b62e874ed85728d73 599 Pfam PF00175 Oxidoreductase NAD-binding domain 457 563 1.7E-22 T 09-03-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 RG43_RS06020 3995d4fdc61d6f7b62e874ed85728d73 599 Gene3D G3DSA:3.40.50.80 455 599 2.3E-59 T 09-03-2017 RG43_RS06020 3995d4fdc61d6f7b62e874ed85728d73 599 SUPERFAMILY SSF52218 60 210 5.52E-44 T 09-03-2017 IPR029039 Flavoprotein-like domain RG43_RS06020 3995d4fdc61d6f7b62e874ed85728d73 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 494 505 4.1E-30 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RG43_RS06020 3995d4fdc61d6f7b62e874ed85728d73 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 548 556 4.1E-30 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RG43_RS06020 3995d4fdc61d6f7b62e874ed85728d73 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 386 393 4.1E-30 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RG43_RS06020 3995d4fdc61d6f7b62e874ed85728d73 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 456 475 4.1E-30 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RG43_RS06020 3995d4fdc61d6f7b62e874ed85728d73 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 270 280 4.1E-30 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RG43_RS06020 3995d4fdc61d6f7b62e874ed85728d73 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 481 490 4.1E-30 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RG43_RS06020 3995d4fdc61d6f7b62e874ed85728d73 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 419 428 4.1E-30 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RG43_RS06020 3995d4fdc61d6f7b62e874ed85728d73 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 525 541 4.1E-30 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RG43_RS06020 3995d4fdc61d6f7b62e874ed85728d73 599 Gene3D G3DSA:1.20.990.10 281 383 5.7E-41 T 09-03-2017 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 GO:0016491|GO:0055114 RG43_RS06020 3995d4fdc61d6f7b62e874ed85728d73 599 SUPERFAMILY SSF52343 444 599 2.23E-52 T 09-03-2017 RG43_RS06020 3995d4fdc61d6f7b62e874ed85728d73 599 SUPERFAMILY SSF63380 227 446 4.47E-65 T 09-03-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RG43_RS23890 bfa308a3f0d6e905c8a578588268d810 366 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 348 358 - T 09-03-2017 IPR030391 RNA methyltransferase TrmA, conserved site RG43_RS23890 bfa308a3f0d6e905c8a578588268d810 366 Gene3D G3DSA:3.40.50.150 155 364 3.1E-44 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS23890 bfa308a3f0d6e905c8a578588268d810 366 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 10 365 2.0E-187 T 09-03-2017 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 RG43_RS23890 bfa308a3f0d6e905c8a578588268d810 366 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 10 365 1.7E-186 T 09-03-2017 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 RG43_RS23890 bfa308a3f0d6e905c8a578588268d810 366 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 366 42.757 T 09-03-2017 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 RG43_RS23890 bfa308a3f0d6e905c8a578588268d810 366 SUPERFAMILY SSF53335 6 363 1.52E-53 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS23890 bfa308a3f0d6e905c8a578588268d810 366 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 299 328 - T 09-03-2017 IPR030390 RNA methyltransferase TrmA, active site RG43_RS04995 fc1100484624f8c918388d0809bdf1a8 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 1.2E-48 T 09-03-2017 IPR003774 Protein of unknown function UPF0301 RG43_RS04995 fc1100484624f8c918388d0809bdf1a8 187 SUPERFAMILY SSF143456 1 187 1.03E-65 T 09-03-2017 RG43_RS04995 fc1100484624f8c918388d0809bdf1a8 187 Gene3D G3DSA:3.30.70.1300 41 130 1.1E-27 T 09-03-2017 RG43_RS04995 fc1100484624f8c918388d0809bdf1a8 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 39.517 T 09-03-2017 IPR003774 Protein of unknown function UPF0301 RG43_RS04995 fc1100484624f8c918388d0809bdf1a8 187 Gene3D G3DSA:3.40.1740.10 2 40 2.4E-35 T 09-03-2017 RG43_RS04995 fc1100484624f8c918388d0809bdf1a8 187 Gene3D G3DSA:3.40.1740.10 131 177 2.4E-35 T 09-03-2017 RG43_RS22995 cfc46e1d5ea97855a685db4f95b3a176 756 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 382 396 - T 09-03-2017 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 RG43_RS22995 cfc46e1d5ea97855a685db4f95b3a176 756 SUPERFAMILY SSF55904 611 755 6.41E-37 T 09-03-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 RG43_RS22995 cfc46e1d5ea97855a685db4f95b3a176 756 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 616 744 8.2E-44 T 09-03-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 RG43_RS22995 cfc46e1d5ea97855a685db4f95b3a176 756 Gene3D G3DSA:3.90.100.10 633 754 2.1E-31 T 09-03-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 RG43_RS22995 cfc46e1d5ea97855a685db4f95b3a176 756 Gene3D G3DSA:3.40.640.10 141 444 1.6E-108 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS22995 cfc46e1d5ea97855a685db4f95b3a176 756 Gene3D G3DSA:3.90.1150.10 448 632 2.5E-69 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RG43_RS22995 cfc46e1d5ea97855a685db4f95b3a176 756 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 141 591 1.4E-196 T 09-03-2017 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 RG43_RS22995 cfc46e1d5ea97855a685db4f95b3a176 756 PIRSF PIRSF009393 1 756 7.7E-275 T 09-03-2017 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 RG43_RS22995 cfc46e1d5ea97855a685db4f95b3a176 756 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 19 135 4.6E-25 T 09-03-2017 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 RG43_RS22995 cfc46e1d5ea97855a685db4f95b3a176 756 SUPERFAMILY SSF53383 141 608 4.87E-112 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS16095 06733d56530f70d6dd29739a0306cfee 382 SUPERFAMILY SSF103473 6 376 7.85E-45 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS16095 06733d56530f70d6dd29739a0306cfee 382 Hamap MF_01149 Uncharacterized MFS-type transporter YcaD [ycaD]. 1 382 40.598 T 09-03-2017 IPR023745 MSF-type transporter, YcaD RG43_RS16095 06733d56530f70d6dd29739a0306cfee 382 Pfam PF07690 Major Facilitator Superfamily 12 227 3.5E-14 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS16095 06733d56530f70d6dd29739a0306cfee 382 Gene3D G3DSA:1.20.1250.20 208 372 1.3E-16 T 09-03-2017 RG43_RS16095 06733d56530f70d6dd29739a0306cfee 382 Gene3D G3DSA:1.20.1250.20 6 184 1.5E-20 T 09-03-2017 RG43_RS03100 a14eee6a28425349b6d6e22e2d36112d 447 Gene3D G3DSA:3.40.50.620 4 174 5.8E-44 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS03100 a14eee6a28425349b6d6e22e2d36112d 447 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 17 25 - T 09-03-2017 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RG43_RS03100 a14eee6a28425349b6d6e22e2d36112d 447 SUPERFAMILY SSF69864 190 444 7.59E-81 T 09-03-2017 RG43_RS03100 a14eee6a28425349b6d6e22e2d36112d 447 Gene3D G3DSA:3.90.1260.10 175 372 1.8E-63 T 09-03-2017 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RG43_RS03100 a14eee6a28425349b6d6e22e2d36112d 447 SUPERFAMILY SSF52402 3 186 6.05E-35 T 09-03-2017 RG43_RS03100 a14eee6a28425349b6d6e22e2d36112d 447 TIGRFAM TIGR00032 argG: argininosuccinate synthase 13 419 3.3E-170 T 09-03-2017 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RG43_RS03100 a14eee6a28425349b6d6e22e2d36112d 447 Gene3D G3DSA:1.10.287.400 377 440 3.4E-35 T 09-03-2017 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail GO:0042803 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 RG43_RS03100 a14eee6a28425349b6d6e22e2d36112d 447 Hamap MF_00581 Argininosuccinate synthase [argG]. 1 443 78.07 T 09-03-2017 IPR023437 Argininosuccinate synthase, type 2 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 RG43_RS03100 a14eee6a28425349b6d6e22e2d36112d 447 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 129 140 - T 09-03-2017 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RG43_RS03100 a14eee6a28425349b6d6e22e2d36112d 447 Pfam PF00764 Arginosuccinate synthase 16 410 8.8E-57 T 09-03-2017 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RG43_RS17435 d0660932313a5ddbe65be5c5c0a1ed16 188 Pfam PF00419 Fimbrial protein 31 188 3.5E-21 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS17435 d0660932313a5ddbe65be5c5c0a1ed16 188 SUPERFAMILY SSF49401 30 188 1.44E-33 T 09-03-2017 IPR008966 Adhesion domain RG43_RS17435 d0660932313a5ddbe65be5c5c0a1ed16 188 Gene3D G3DSA:2.60.40.1090 29 188 6.1E-38 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS13470 6bf54baee61b13e781585b52912ea80c 74 Pfam PF04325 Protein of unknown function (DUF465) 19 66 5.9E-14 T 09-03-2017 IPR007420 Protein of unknown function DUF465 RG43_RS08720 49c2eb3c68777b82e642ac5fd572d55c 216 TIGRFAM TIGR00568 alkb: alkylated DNA repair protein AlkB 22 189 3.9E-76 T 09-03-2017 IPR004574 Alkylated DNA repair protein AlkB GO:0006281|GO:0055114 RG43_RS08720 49c2eb3c68777b82e642ac5fd572d55c 216 Gene3D G3DSA:2.60.120.590 15 214 2.0E-61 T 09-03-2017 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like RG43_RS08720 49c2eb3c68777b82e642ac5fd572d55c 216 SUPERFAMILY SSF51197 16 212 5.22E-63 T 09-03-2017 RG43_RS08720 49c2eb3c68777b82e642ac5fd572d55c 216 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 19 210 1.3E-55 T 09-03-2017 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like RG43_RS05825 7603b13afa260d736bb558edbf979eaa 472 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 249 7.3E-89 T 09-03-2017 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 RG43_RS05825 7603b13afa260d736bb558edbf979eaa 472 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 134 146 - T 09-03-2017 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 RG43_RS05825 7603b13afa260d736bb558edbf979eaa 472 Gene3D G3DSA:3.30.420.40 254 468 5.9E-34 T 09-03-2017 RG43_RS05825 7603b13afa260d736bb558edbf979eaa 472 SUPERFAMILY SSF53067 254 467 5.02E-41 T 09-03-2017 RG43_RS05825 7603b13afa260d736bb558edbf979eaa 472 TIGRFAM TIGR02628 fuculo_kin_coli: L-fuculokinase 4 463 8.0E-255 T 09-03-2017 IPR013450 L-fuculokinase GO:0005975|GO:0008737 KEGG: 00051+2.7.1.51 RG43_RS05825 7603b13afa260d736bb558edbf979eaa 472 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 259 438 4.0E-21 T 09-03-2017 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 RG43_RS05825 7603b13afa260d736bb558edbf979eaa 472 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 351 371 - T 09-03-2017 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 RG43_RS05825 7603b13afa260d736bb558edbf979eaa 472 SUPERFAMILY SSF53067 5 252 5.91E-62 T 09-03-2017 RG43_RS05825 7603b13afa260d736bb558edbf979eaa 472 Gene3D G3DSA:3.30.420.40 1 250 1.9E-55 T 09-03-2017 RG43_RS05825 7603b13afa260d736bb558edbf979eaa 472 PIRSF PIRSF000538 3 472 1.7E-84 T 09-03-2017 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 RG43_RS05825 7603b13afa260d736bb558edbf979eaa 472 Hamap MF_00986 L-fuculokinase [fucK]. 3 464 62.754 T 09-03-2017 IPR013450 L-fuculokinase GO:0005975|GO:0008737 KEGG: 00051+2.7.1.51 RG43_RS12560 1995aeccac1db2a93fe61d2524463a56 530 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 70 372 5.5E-99 T 09-03-2017 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 RG43_RS12560 1995aeccac1db2a93fe61d2524463a56 530 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 420 511 3.1E-27 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RG43_RS12560 1995aeccac1db2a93fe61d2524463a56 530 TIGRFAM TIGR02004 PTS-IIBC-malX: PTS system, maltose and glucose-specific IIBC component 8 525 7.2E-258 T 09-03-2017 IPR011301 PTS system, maltose/glucose-specific IIBC component GO:0008982|GO:0009401 RG43_RS12560 1995aeccac1db2a93fe61d2524463a56 530 SUPERFAMILY SSF55604 454 525 2.88E-21 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RG43_RS12560 1995aeccac1db2a93fe61d2524463a56 530 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 464 481 - T 09-03-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 RG43_RS12560 1995aeccac1db2a93fe61d2524463a56 530 Pfam PF00367 phosphotransferase system, EIIB 455 486 2.2E-16 T 09-03-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 RG43_RS12560 1995aeccac1db2a93fe61d2524463a56 530 Gene3D G3DSA:3.30.1360.60 454 525 4.3E-27 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RG43_RS12560 1995aeccac1db2a93fe61d2524463a56 530 Pfam PF02378 Phosphotransferase system, EIIC 19 361 1.4E-87 T 09-03-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 RG43_RS19410 712a435c1480e5ec6f8b63fcf8763a30 472 Gene3D G3DSA:3.90.1700.10 305 470 9.3E-78 T 09-03-2017 RG43_RS19410 712a435c1480e5ec6f8b63fcf8763a30 472 Pfam PF06545 Protein of unknown function (DUF1116) 143 357 1.5E-89 T 09-03-2017 IPR009499 Protein of unknown function DUF1116 RG43_RS19410 712a435c1480e5ec6f8b63fcf8763a30 472 Gene3D G3DSA:1.10.10.660 95 155 1.2E-36 T 09-03-2017 IPR024033 Uncharacterised domain, YlbE RG43_RS19410 712a435c1480e5ec6f8b63fcf8763a30 472 Gene3D G3DSA:3.90.1710.10 156 303 2.4E-73 T 09-03-2017 RG43_RS26545 83298a0b5a2cbc78a4b74e864109c268 275 SUPERFAMILY SSF51430 5 268 8.25E-91 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain RG43_RS26545 83298a0b5a2cbc78a4b74e864109c268 275 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 41 58 - T 09-03-2017 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 RG43_RS26545 83298a0b5a2cbc78a4b74e864109c268 275 Pfam PF00248 Aldo/keto reductase family 18 192 1.9E-39 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain RG43_RS26545 83298a0b5a2cbc78a4b74e864109c268 275 Pfam PF00248 Aldo/keto reductase family 201 260 1.5E-9 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain RG43_RS26545 83298a0b5a2cbc78a4b74e864109c268 275 Gene3D G3DSA:3.20.20.100 5 271 1.7E-103 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain RG43_RS26545 83298a0b5a2cbc78a4b74e864109c268 275 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 123 140 - T 09-03-2017 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 RG43_RS26545 83298a0b5a2cbc78a4b74e864109c268 275 PRINTS PR00069 Aldo-keto reductase signature 123 140 2.5E-46 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RG43_RS26545 83298a0b5a2cbc78a4b74e864109c268 275 PRINTS PR00069 Aldo-keto reductase signature 157 186 2.5E-46 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RG43_RS26545 83298a0b5a2cbc78a4b74e864109c268 275 PRINTS PR00069 Aldo-keto reductase signature 37 61 2.5E-46 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RG43_RS26545 83298a0b5a2cbc78a4b74e864109c268 275 PRINTS PR00069 Aldo-keto reductase signature 91 109 2.5E-46 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RG43_RS26545 83298a0b5a2cbc78a4b74e864109c268 275 PRINTS PR00069 Aldo-keto reductase signature 196 220 2.5E-46 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RG43_RS26545 83298a0b5a2cbc78a4b74e864109c268 275 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 229 244 - T 09-03-2017 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 RG43_RS04170 83298a0b5a2cbc78a4b74e864109c268 275 SUPERFAMILY SSF51430 5 268 8.25E-91 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain RG43_RS04170 83298a0b5a2cbc78a4b74e864109c268 275 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 41 58 - T 09-03-2017 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 RG43_RS04170 83298a0b5a2cbc78a4b74e864109c268 275 Pfam PF00248 Aldo/keto reductase family 18 192 1.9E-39 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain RG43_RS04170 83298a0b5a2cbc78a4b74e864109c268 275 Pfam PF00248 Aldo/keto reductase family 201 260 1.5E-9 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain RG43_RS04170 83298a0b5a2cbc78a4b74e864109c268 275 Gene3D G3DSA:3.20.20.100 5 271 1.7E-103 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain RG43_RS04170 83298a0b5a2cbc78a4b74e864109c268 275 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 123 140 - T 09-03-2017 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 RG43_RS04170 83298a0b5a2cbc78a4b74e864109c268 275 PRINTS PR00069 Aldo-keto reductase signature 123 140 2.5E-46 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RG43_RS04170 83298a0b5a2cbc78a4b74e864109c268 275 PRINTS PR00069 Aldo-keto reductase signature 157 186 2.5E-46 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RG43_RS04170 83298a0b5a2cbc78a4b74e864109c268 275 PRINTS PR00069 Aldo-keto reductase signature 37 61 2.5E-46 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RG43_RS04170 83298a0b5a2cbc78a4b74e864109c268 275 PRINTS PR00069 Aldo-keto reductase signature 91 109 2.5E-46 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RG43_RS04170 83298a0b5a2cbc78a4b74e864109c268 275 PRINTS PR00069 Aldo-keto reductase signature 196 220 2.5E-46 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RG43_RS04170 83298a0b5a2cbc78a4b74e864109c268 275 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 229 244 - T 09-03-2017 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 RG43_RS20645 2a381e1e09c703d61823ce7f7d5643e3 241 Pfam PF00696 Amino acid kinase family 10 219 3.9E-28 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase RG43_RS20645 2a381e1e09c703d61823ce7f7d5643e3 241 PIRSF PIRSF005650 4 241 2.2E-89 T 09-03-2017 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 RG43_RS20645 2a381e1e09c703d61823ce7f7d5643e3 241 SUPERFAMILY SSF53633 7 240 3.93E-72 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase RG43_RS20645 2a381e1e09c703d61823ce7f7d5643e3 241 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 43.437 T 09-03-2017 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 RG43_RS20645 2a381e1e09c703d61823ce7f7d5643e3 241 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 7.3E-104 T 09-03-2017 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 RG43_RS20645 2a381e1e09c703d61823ce7f7d5643e3 241 Gene3D G3DSA:3.40.1160.10 3 240 1.4E-85 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase RG43_RS26285 afa214ffe1cff1ed74e5959fe76b7659 946 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 32 276 1.0E-98 T 09-03-2017 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 RG43_RS26285 afa214ffe1cff1ed74e5959fe76b7659 946 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 553 805 1.1E-102 T 09-03-2017 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 RG43_RS26285 afa214ffe1cff1ed74e5959fe76b7659 946 Gene3D G3DSA:3.30.460.10 639 811 9.4E-63 T 09-03-2017 RG43_RS26285 afa214ffe1cff1ed74e5959fe76b7659 946 Gene3D G3DSA:3.30.460.10 113 285 3.6E-62 T 09-03-2017 RG43_RS26285 afa214ffe1cff1ed74e5959fe76b7659 946 SUPERFAMILY SSF81593 287 436 4.24E-46 T 09-03-2017 RG43_RS26285 afa214ffe1cff1ed74e5959fe76b7659 946 SUPERFAMILY SSF81301 10 286 1.37E-90 T 09-03-2017 RG43_RS26285 afa214ffe1cff1ed74e5959fe76b7659 946 Pfam PF08335 GlnD PII-uridylyltransferase 825 916 4.2E-12 T 09-03-2017 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 RG43_RS26285 afa214ffe1cff1ed74e5959fe76b7659 946 Pfam PF08335 GlnD PII-uridylyltransferase 297 436 3.6E-46 T 09-03-2017 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 RG43_RS26285 afa214ffe1cff1ed74e5959fe76b7659 946 SUPERFAMILY SSF81593 818 943 1.65E-33 T 09-03-2017 RG43_RS26285 afa214ffe1cff1ed74e5959fe76b7659 946 SUPERFAMILY SSF81301 525 815 2.22E-89 T 09-03-2017 RG43_RS26285 afa214ffe1cff1ed74e5959fe76b7659 946 Hamap MF_00802 Glutamate-ammonia-ligase adenylyltransferase [glnE]. 27 945 20.156 T 09-03-2017 IPR023057 Glutamate-ammonia-ligase adenylyltransferase GO:0008882 RG43_RS03910 afa214ffe1cff1ed74e5959fe76b7659 946 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 32 276 1.0E-98 T 09-03-2017 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 RG43_RS03910 afa214ffe1cff1ed74e5959fe76b7659 946 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 553 805 1.1E-102 T 09-03-2017 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 RG43_RS03910 afa214ffe1cff1ed74e5959fe76b7659 946 Gene3D G3DSA:3.30.460.10 639 811 9.4E-63 T 09-03-2017 RG43_RS03910 afa214ffe1cff1ed74e5959fe76b7659 946 Gene3D G3DSA:3.30.460.10 113 285 3.6E-62 T 09-03-2017 RG43_RS03910 afa214ffe1cff1ed74e5959fe76b7659 946 SUPERFAMILY SSF81593 287 436 4.24E-46 T 09-03-2017 RG43_RS03910 afa214ffe1cff1ed74e5959fe76b7659 946 SUPERFAMILY SSF81301 10 286 1.37E-90 T 09-03-2017 RG43_RS03910 afa214ffe1cff1ed74e5959fe76b7659 946 Pfam PF08335 GlnD PII-uridylyltransferase 825 916 4.2E-12 T 09-03-2017 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 RG43_RS03910 afa214ffe1cff1ed74e5959fe76b7659 946 Pfam PF08335 GlnD PII-uridylyltransferase 297 436 3.6E-46 T 09-03-2017 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 RG43_RS03910 afa214ffe1cff1ed74e5959fe76b7659 946 SUPERFAMILY SSF81593 818 943 1.65E-33 T 09-03-2017 RG43_RS03910 afa214ffe1cff1ed74e5959fe76b7659 946 SUPERFAMILY SSF81301 525 815 2.22E-89 T 09-03-2017 RG43_RS03910 afa214ffe1cff1ed74e5959fe76b7659 946 Hamap MF_00802 Glutamate-ammonia-ligase adenylyltransferase [glnE]. 27 945 20.156 T 09-03-2017 IPR023057 Glutamate-ammonia-ligase adenylyltransferase GO:0008882 RG43_RS01965 ffd3ae488feb0a7b0ad90f4f5fa81c8d 133 SMART SM00363 9 72 1.2E-11 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 RG43_RS01965 ffd3ae488feb0a7b0ad90f4f5fa81c8d 133 PIRSF PIRSF016821 6 133 5.3E-41 T 09-03-2017 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 RG43_RS01965 ffd3ae488feb0a7b0ad90f4f5fa81c8d 133 SUPERFAMILY SSF55174 7 103 4.32E-31 T 09-03-2017 RG43_RS01965 ffd3ae488feb0a7b0ad90f4f5fa81c8d 133 Pfam PF01479 S4 domain 9 53 2.8E-13 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 RG43_RS01965 ffd3ae488feb0a7b0ad90f4f5fa81c8d 133 Gene3D G3DSA:3.10.290.10 7 103 4.0E-39 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 RG43_RS14490 1f91ad00efd1531290533055614b9085 277 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 1 277 1.3E-106 T 09-03-2017 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 RG43_RS14490 1f91ad00efd1531290533055614b9085 277 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 23 271 2.6E-89 T 09-03-2017 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 RG43_RS14490 1f91ad00efd1531290533055614b9085 277 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 180 186 - T 09-03-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RG43_RS14490 1f91ad00efd1531290533055614b9085 277 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 4 275 47.085 T 09-03-2017 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 RG43_RS14490 1f91ad00efd1531290533055614b9085 277 SUPERFAMILY SSF53335 3 275 2.69E-59 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS14490 1f91ad00efd1531290533055614b9085 277 Gene3D G3DSA:3.40.50.150 86 274 1.1E-70 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS14490 1f91ad00efd1531290533055614b9085 277 Pfam PF13847 Methyltransferase domain 108 243 6.5E-20 T 09-03-2017 IPR025714 Methyltransferase domain RG43_RS14490 1f91ad00efd1531290533055614b9085 277 Gene3D G3DSA:1.10.8.10 1 84 5.7E-31 T 09-03-2017 RG43_RS14870 9ee5ab5b0947d03502e5c0eddd90eb2a 223 SMART SM00448 1 112 4.7E-38 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS14870 9ee5ab5b0947d03502e5c0eddd90eb2a 223 SUPERFAMILY SSF52172 1 173 1.12E-37 T 09-03-2017 IPR011006 CheY-like superfamily RG43_RS14870 9ee5ab5b0947d03502e5c0eddd90eb2a 223 Pfam PF00072 Response regulator receiver domain 3 112 2.4E-25 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS14870 9ee5ab5b0947d03502e5c0eddd90eb2a 223 Gene3D G3DSA:1.10.10.10 124 221 1.8E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS14870 9ee5ab5b0947d03502e5c0eddd90eb2a 223 SMART SM00862 145 220 2.2E-19 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RG43_RS14870 9ee5ab5b0947d03502e5c0eddd90eb2a 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 7.1E-20 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RG43_RS14870 9ee5ab5b0947d03502e5c0eddd90eb2a 223 Gene3D G3DSA:3.40.50.2300 1 122 4.1E-35 T 09-03-2017 RG43_RS25095 361a48ee9873e2216b08d9cc6b57f9e9 106 ProSitePatterns PS01344 Frataxin family signature. 50 64 - T 09-03-2017 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 RG43_RS25095 361a48ee9873e2216b08d9cc6b57f9e9 106 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 105 4.7E-44 T 09-03-2017 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 RG43_RS25095 361a48ee9873e2216b08d9cc6b57f9e9 106 Pfam PF01491 Frataxin-like domain 1 102 1.3E-30 T 09-03-2017 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 RG43_RS25095 361a48ee9873e2216b08d9cc6b57f9e9 106 Hamap MF_00142 Protein CyaY [cyaY]. 1 105 29.262 T 09-03-2017 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 RG43_RS25095 361a48ee9873e2216b08d9cc6b57f9e9 106 SMART SM01219 1 106 1.7E-57 T 09-03-2017 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 RG43_RS25095 361a48ee9873e2216b08d9cc6b57f9e9 106 SUPERFAMILY SSF55387 1 105 1.29E-40 T 09-03-2017 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 RG43_RS25095 361a48ee9873e2216b08d9cc6b57f9e9 106 Gene3D G3DSA:3.30.920.10 1 105 3.5E-37 T 09-03-2017 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 RG43_RS20040 2c4b8eeefe6cde53da4df1bb87e5c408 485 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 8 482 3.8E-186 T 09-03-2017 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 RG43_RS20040 2c4b8eeefe6cde53da4df1bb87e5c408 485 Pfam PF01546 Peptidase family M20/M25/M40 73 480 5.7E-21 T 09-03-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RG43_RS20040 2c4b8eeefe6cde53da4df1bb87e5c408 485 Gene3D G3DSA:3.40.630.10 3 181 3.9E-111 T 09-03-2017 RG43_RS20040 2c4b8eeefe6cde53da4df1bb87e5c408 485 Gene3D G3DSA:3.40.630.10 397 483 3.9E-111 T 09-03-2017 RG43_RS20040 2c4b8eeefe6cde53da4df1bb87e5c408 485 SUPERFAMILY SSF53187 10 182 3.01E-66 T 09-03-2017 RG43_RS20040 2c4b8eeefe6cde53da4df1bb87e5c408 485 SUPERFAMILY SSF53187 397 482 3.01E-66 T 09-03-2017 RG43_RS20040 2c4b8eeefe6cde53da4df1bb87e5c408 485 PIRSF PIRSF016599 1 485 4.4E-215 T 09-03-2017 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 RG43_RS20040 2c4b8eeefe6cde53da4df1bb87e5c408 485 PRINTS PR00934 X-His dipeptidase (M25) signature 206 223 1.7E-103 T 09-03-2017 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 RG43_RS20040 2c4b8eeefe6cde53da4df1bb87e5c408 485 PRINTS PR00934 X-His dipeptidase (M25) signature 428 444 1.7E-103 T 09-03-2017 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 RG43_RS20040 2c4b8eeefe6cde53da4df1bb87e5c408 485 PRINTS PR00934 X-His dipeptidase (M25) signature 363 381 1.7E-103 T 09-03-2017 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 RG43_RS20040 2c4b8eeefe6cde53da4df1bb87e5c408 485 PRINTS PR00934 X-His dipeptidase (M25) signature 80 99 1.7E-103 T 09-03-2017 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 RG43_RS20040 2c4b8eeefe6cde53da4df1bb87e5c408 485 PRINTS PR00934 X-His dipeptidase (M25) signature 450 472 1.7E-103 T 09-03-2017 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 RG43_RS20040 2c4b8eeefe6cde53da4df1bb87e5c408 485 PRINTS PR00934 X-His dipeptidase (M25) signature 101 119 1.7E-103 T 09-03-2017 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 RG43_RS20040 2c4b8eeefe6cde53da4df1bb87e5c408 485 PRINTS PR00934 X-His dipeptidase (M25) signature 135 152 1.7E-103 T 09-03-2017 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 RG43_RS20040 2c4b8eeefe6cde53da4df1bb87e5c408 485 PRINTS PR00934 X-His dipeptidase (M25) signature 159 177 1.7E-103 T 09-03-2017 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 RG43_RS20040 2c4b8eeefe6cde53da4df1bb87e5c408 485 PRINTS PR00934 X-His dipeptidase (M25) signature 251 270 1.7E-103 T 09-03-2017 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 RG43_RS20040 2c4b8eeefe6cde53da4df1bb87e5c408 485 Pfam PF07687 Peptidase dimerisation domain 209 293 5.9E-8 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain RG43_RS08260 9c56481195c0a84887bc132b90327655 120 SMART SM00905 8 118 2.0E-33 T 09-03-2017 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 RG43_RS08260 9c56481195c0a84887bc132b90327655 120 Pfam PF02152 Dihydroneopterin aldolase 8 116 2.1E-25 T 09-03-2017 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 RG43_RS08260 9c56481195c0a84887bc132b90327655 120 TIGRFAM TIGR00526 folB_dom: FolB domain 6 120 1.5E-39 T 09-03-2017 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 RG43_RS08260 9c56481195c0a84887bc132b90327655 120 SUPERFAMILY SSF55620 6 120 1.67E-31 T 09-03-2017 RG43_RS08260 9c56481195c0a84887bc132b90327655 120 Gene3D G3DSA:3.30.1130.10 3 120 3.3E-37 T 09-03-2017 RG43_RS08810 8d77f686c066c4296f8b5f002af8963f 185 ProSitePatterns PS00194 Thioredoxin family active site. 72 90 - T 09-03-2017 IPR017937 Thioredoxin, conserved site GO:0045454 RG43_RS08810 8d77f686c066c4296f8b5f002af8963f 185 SUPERFAMILY SSF52833 46 178 3.94E-40 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS08810 8d77f686c066c4296f8b5f002af8963f 185 Pfam PF08534 Redoxin 42 166 5.2E-23 T 09-03-2017 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 RG43_RS08810 8d77f686c066c4296f8b5f002af8963f 185 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 178 1.3E-85 T 09-03-2017 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 RG43_RS08810 8d77f686c066c4296f8b5f002af8963f 185 Gene3D G3DSA:3.40.30.10 10 178 5.3E-42 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS20960 38c7af6709a5dfe823398b980fb43157 630 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 399 629 2.4E-79 T 09-03-2017 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 RG43_RS20960 38c7af6709a5dfe823398b980fb43157 630 Gene3D G3DSA:3.30.559.10 389 630 5.6E-83 T 09-03-2017 IPR023213 Chloramphenicol acetyltransferase-like domain Reactome: R-HSA-389661 RG43_RS20960 38c7af6709a5dfe823398b980fb43157 630 Gene3D G3DSA:2.40.50.100 1 94 5.8E-22 T 09-03-2017 RG43_RS20960 38c7af6709a5dfe823398b980fb43157 630 Gene3D G3DSA:4.10.320.10 319 367 2.0E-22 T 09-03-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 RG43_RS20960 38c7af6709a5dfe823398b980fb43157 630 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 09-03-2017 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 RG43_RS20960 38c7af6709a5dfe823398b980fb43157 630 SUPERFAMILY SSF51230 206 298 4.45E-23 T 09-03-2017 IPR011053 Single hybrid motif RG43_RS20960 38c7af6709a5dfe823398b980fb43157 630 Pfam PF00364 Biotin-requiring enzyme 207 277 4.1E-22 T 09-03-2017 IPR000089 Biotin/lipoyl attachment RG43_RS20960 38c7af6709a5dfe823398b980fb43157 630 Pfam PF00364 Biotin-requiring enzyme 107 176 6.2E-23 T 09-03-2017 IPR000089 Biotin/lipoyl attachment RG43_RS20960 38c7af6709a5dfe823398b980fb43157 630 Pfam PF00364 Biotin-requiring enzyme 4 73 1.8E-21 T 09-03-2017 IPR000089 Biotin/lipoyl attachment RG43_RS20960 38c7af6709a5dfe823398b980fb43157 630 SUPERFAMILY SSF51230 1 93 5.23E-23 T 09-03-2017 IPR011053 Single hybrid motif RG43_RS20960 38c7af6709a5dfe823398b980fb43157 630 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 180 630 1.2E-242 T 09-03-2017 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 RG43_RS20960 38c7af6709a5dfe823398b980fb43157 630 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 128 157 - T 09-03-2017 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 RG43_RS20960 38c7af6709a5dfe823398b980fb43157 630 SUPERFAMILY SSF52777 388 629 8.45E-80 T 09-03-2017 RG43_RS20960 38c7af6709a5dfe823398b980fb43157 630 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 229 258 - T 09-03-2017 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 RG43_RS20960 38c7af6709a5dfe823398b980fb43157 630 Pfam PF02817 e3 binding domain 327 362 2.1E-15 T 09-03-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 RG43_RS20960 38c7af6709a5dfe823398b980fb43157 630 Gene3D G3DSA:2.40.50.100 208 282 4.9E-22 T 09-03-2017 RG43_RS20960 38c7af6709a5dfe823398b980fb43157 630 Gene3D G3DSA:2.40.50.100 107 182 2.8E-23 T 09-03-2017 RG43_RS20960 38c7af6709a5dfe823398b980fb43157 630 SUPERFAMILY SSF51230 105 197 3.4E-24 T 09-03-2017 IPR011053 Single hybrid motif RG43_RS20960 38c7af6709a5dfe823398b980fb43157 630 SUPERFAMILY SSF47005 321 366 2.22E-13 T 09-03-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 RG43_RS09160 2f53cbd0a6160941b1f366db4f4e9bb5 305 Gene3D G3DSA:3.40.190.10 24 133 4.8E-57 T 09-03-2017 RG43_RS09160 2f53cbd0a6160941b1f366db4f4e9bb5 305 Gene3D G3DSA:3.40.190.10 254 304 4.8E-57 T 09-03-2017 RG43_RS09160 2f53cbd0a6160941b1f366db4f4e9bb5 305 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 26 300 2.3E-60 T 09-03-2017 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 RG43_RS09160 2f53cbd0a6160941b1f366db4f4e9bb5 305 Gene3D G3DSA:3.40.190.120 134 241 2.0E-27 T 09-03-2017 RG43_RS09160 2f53cbd0a6160941b1f366db4f4e9bb5 305 SUPERFAMILY SSF53850 26 303 1.79E-59 T 09-03-2017 RG43_RS08505 3dd8310a3c9b0739f550df10e990c2d0 379 PIRSF PIRSF000390 1 379 8.2E-115 T 09-03-2017 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RG43_RS08505 3dd8310a3c9b0739f550df10e990c2d0 379 Hamap MF_01167 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase [arnB]. 1 379 69.976 T 09-03-2017 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB GO:0008483 KEGG: 00520+2.6.1.87 RG43_RS08505 3dd8310a3c9b0739f550df10e990c2d0 379 SUPERFAMILY SSF53383 4 376 2.18E-115 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS08505 3dd8310a3c9b0739f550df10e990c2d0 379 Gene3D G3DSA:3.90.1150.10 253 378 6.6E-44 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RG43_RS08505 3dd8310a3c9b0739f550df10e990c2d0 379 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 373 1.1E-137 T 09-03-2017 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RG43_RS08505 3dd8310a3c9b0739f550df10e990c2d0 379 Gene3D G3DSA:3.40.640.10 4 250 7.6E-88 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS23535 54d7c00839442324acd03b9ce893ae82 90 Pfam PF11656 YjbD family (DUF3811) 3 90 6.3E-39 T 09-03-2017 IPR020317 Uncharacterised protein family YjbD RG43_RS23535 54d7c00839442324acd03b9ce893ae82 90 ProDom PD063639 YJBD CYTOPLASMIC STY4411 YPO2363 ECS5006 Y1969 3 90 8.0E-35 T 09-03-2017 IPR020317 Uncharacterised protein family YjbD RG43_RS01225 ac797bbc1012fe9e3a1d90be39c0f000 200 Gene3D G3DSA:1.10.10.10 133 195 1.4E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS01225 ac797bbc1012fe9e3a1d90be39c0f000 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 2.1E-12 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS01225 ac797bbc1012fe9e3a1d90be39c0f000 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 2.1E-12 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS01225 ac797bbc1012fe9e3a1d90be39c0f000 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 2.1E-12 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS01225 ac797bbc1012fe9e3a1d90be39c0f000 200 Pfam PF00196 Bacterial regulatory proteins, luxR family 140 195 2.2E-21 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS01225 ac797bbc1012fe9e3a1d90be39c0f000 200 SUPERFAMILY SSF46894 134 196 6.12E-19 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RG43_RS01225 ac797bbc1012fe9e3a1d90be39c0f000 200 Gene3D G3DSA:3.40.50.2300 1 120 2.7E-4 T 09-03-2017 RG43_RS01225 ac797bbc1012fe9e3a1d90be39c0f000 200 ProSitePatterns PS00622 LuxR-type HTH domain signature. 156 183 - T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS01225 ac797bbc1012fe9e3a1d90be39c0f000 200 SMART SM00421 139 196 5.8E-22 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS09040 2c242910cb3cdf4137502dac1ebc7215 222 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 36 219 33.703 T 09-03-2017 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 RG43_RS09040 2c242910cb3cdf4137502dac1ebc7215 222 SUPERFAMILY SSF55620 4 221 1.11E-76 T 09-03-2017 RG43_RS09040 2c242910cb3cdf4137502dac1ebc7215 222 Gene3D G3DSA:3.30.1130.10 92 220 6.5E-51 T 09-03-2017 RG43_RS09040 2c242910cb3cdf4137502dac1ebc7215 222 Pfam PF01227 GTP cyclohydrolase I 41 218 2.7E-62 T 09-03-2017 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 RG43_RS09040 2c242910cb3cdf4137502dac1ebc7215 222 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 98 114 - T 09-03-2017 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 RG43_RS09040 2c242910cb3cdf4137502dac1ebc7215 222 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 40 220 1.5E-86 T 09-03-2017 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 RG43_RS09040 2c242910cb3cdf4137502dac1ebc7215 222 Gene3D G3DSA:1.10.286.10 4 86 2.5E-32 T 09-03-2017 RG43_RS09040 2c242910cb3cdf4137502dac1ebc7215 222 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 146 156 - T 09-03-2017 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 RG43_RS03045 ea80f009560fb761923f257d0533a55c 390 Pfam PF01926 50S ribosome-binding GTPase 162 284 1.3E-23 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 RG43_RS03045 ea80f009560fb761923f257d0533a55c 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 3.5E-34 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 RG43_RS03045 ea80f009560fb761923f257d0533a55c 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 3.5E-34 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 RG43_RS03045 ea80f009560fb761923f257d0533a55c 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 3.5E-34 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 RG43_RS03045 ea80f009560fb761923f257d0533a55c 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 3.5E-34 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 RG43_RS03045 ea80f009560fb761923f257d0533a55c 390 Hamap MF_01454 GTPase Obg [obg]. 2 333 48.475 T 09-03-2017 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 RG43_RS03045 ea80f009560fb761923f257d0533a55c 390 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 331 1.6E-148 T 09-03-2017 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 RG43_RS03045 ea80f009560fb761923f257d0533a55c 390 PIRSF PIRSF002401 1 376 2.6E-140 T 09-03-2017 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 RG43_RS03045 ea80f009560fb761923f257d0533a55c 390 SUPERFAMILY SSF52540 161 350 3.2E-49 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS03045 ea80f009560fb761923f257d0533a55c 390 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 09-03-2017 IPR006074 GTP1/OBG, conserved site GO:0005525 RG43_RS03045 ea80f009560fb761923f257d0533a55c 390 Pfam PF01018 GTP1/OBG 3 157 1.3E-60 T 09-03-2017 IPR006169 GTP1/OBG domain GO:0005525 RG43_RS03045 ea80f009560fb761923f257d0533a55c 390 SUPERFAMILY SSF82051 2 157 1.12E-56 T 09-03-2017 IPR006169 GTP1/OBG domain GO:0005525 RG43_RS03045 ea80f009560fb761923f257d0533a55c 390 Gene3D G3DSA:2.70.210.12 2 156 1.4E-60 T 09-03-2017 IPR006169 GTP1/OBG domain GO:0005525 RG43_RS03045 ea80f009560fb761923f257d0533a55c 390 Gene3D G3DSA:3.40.50.300 160 348 3.5E-49 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS19730 81ca41c59dce2982c450b5678b799e9a 37 SUPERFAMILY SSF46689 1 36 9.85E-8 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS19730 81ca41c59dce2982c450b5678b799e9a 37 Gene3D G3DSA:1.10.10.60 8 36 1.4E-6 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS19730 81ca41c59dce2982c450b5678b799e9a 37 Pfam PF01527 Transposase 4 36 4.4E-9 T 09-03-2017 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RG43_RS02300 2089506f3073e1a9f6ee5339b2e8d03c 327 Gene3D G3DSA:3.30.1300.30 286 322 8.9E-12 T 09-03-2017 RG43_RS02300 2089506f3073e1a9f6ee5339b2e8d03c 327 Gene3D G3DSA:3.30.1300.30 27 99 8.9E-12 T 09-03-2017 RG43_RS02300 2089506f3073e1a9f6ee5339b2e8d03c 327 SUPERFAMILY SSF54523 285 321 3.66E-12 T 09-03-2017 RG43_RS02300 2089506f3073e1a9f6ee5339b2e8d03c 327 SUPERFAMILY SSF54523 36 101 3.66E-12 T 09-03-2017 RG43_RS02300 2089506f3073e1a9f6ee5339b2e8d03c 327 Gene3D G3DSA:1.10.40.60 215 284 3.6E-21 T 09-03-2017 RG43_RS02300 2089506f3073e1a9f6ee5339b2e8d03c 327 SUPERFAMILY SSF158544 103 212 7.32E-29 T 09-03-2017 RG43_RS02300 2089506f3073e1a9f6ee5339b2e8d03c 327 SUPERFAMILY SSF158544 215 266 2.62E-12 T 09-03-2017 RG43_RS02300 2089506f3073e1a9f6ee5339b2e8d03c 327 Pfam PF03934 Type II secretion system (T2SS), protein K 34 315 2.7E-66 T 09-03-2017 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 RG43_RS02300 2089506f3073e1a9f6ee5339b2e8d03c 327 Gene3D G3DSA:1.10.40.60 100 213 9.6E-36 T 09-03-2017 RG43_RS02300 2089506f3073e1a9f6ee5339b2e8d03c 327 PIRSF PIRSF002786 1 327 4.4E-93 T 09-03-2017 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 RG43_RS10565 c3ebed40a20961bd5742da5df07e3302 283 Gene3D G3DSA:3.40.50.880 2 278 3.5E-84 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like RG43_RS10565 c3ebed40a20961bd5742da5df07e3302 283 SUPERFAMILY SSF52317 7 278 9.79E-54 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like RG43_RS10565 c3ebed40a20961bd5742da5df07e3302 283 Hamap MF_01046 Protein deglycase HchA [hchA]. 1 283 66.588 T 09-03-2017 IPR017283 Protein deglycase HchA KEGG: 00620+4.2.1.130|MetaCyc: PWY-901 RG43_RS10565 c3ebed40a20961bd5742da5df07e3302 283 PIRSF PIRSF037798 1 283 2.0E-147 T 09-03-2017 IPR017283 Protein deglycase HchA KEGG: 00620+4.2.1.130|MetaCyc: PWY-901 RG43_RS10565 c3ebed40a20961bd5742da5df07e3302 283 Pfam PF01965 DJ-1/PfpI family 75 266 2.8E-6 T 09-03-2017 IPR002818 DJ-1/PfpI RG43_RS11365 c6552734e4bf94e1e3aa6433ff71184a 686 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 507 537 - T 09-03-2017 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 RG43_RS11365 c6552734e4bf94e1e3aa6433ff71184a 686 SUPERFAMILY SSF53474 414 655 6.12E-44 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS11365 c6552734e4bf94e1e3aa6433ff71184a 686 SUPERFAMILY SSF50993 2 408 7.06E-82 T 09-03-2017 RG43_RS11365 c6552734e4bf94e1e3aa6433ff71184a 686 Gene3D G3DSA:3.40.50.1820 416 647 2.4E-35 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS11365 c6552734e4bf94e1e3aa6433ff71184a 686 Pfam PF00326 Prolyl oligopeptidase family 463 676 6.7E-69 T 09-03-2017 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 RG43_RS11365 c6552734e4bf94e1e3aa6433ff71184a 686 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 3 403 9.0E-119 T 09-03-2017 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 RG43_RS11365 c6552734e4bf94e1e3aa6433ff71184a 686 Gene3D G3DSA:2.130.10.120 73 407 2.0E-98 T 09-03-2017 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 RG43_RS11365 c6552734e4bf94e1e3aa6433ff71184a 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 500 519 2.7E-54 T 09-03-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 RG43_RS11365 c6552734e4bf94e1e3aa6433ff71184a 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 472 496 2.7E-54 T 09-03-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 RG43_RS11365 c6552734e4bf94e1e3aa6433ff71184a 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 446 464 2.7E-54 T 09-03-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 RG43_RS11365 c6552734e4bf94e1e3aa6433ff71184a 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 530 550 2.7E-54 T 09-03-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 RG43_RS11365 c6552734e4bf94e1e3aa6433ff71184a 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 606 628 2.7E-54 T 09-03-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 RG43_RS11365 c6552734e4bf94e1e3aa6433ff71184a 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 588 603 2.7E-54 T 09-03-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 RG43_RS21920 d143be92f2c2072201374f566dd4f00c 470 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 8.8E-16 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS21920 d143be92f2c2072201374f566dd4f00c 470 Gene3D G3DSA:3.90.1150.10 349 466 6.4E-10 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RG43_RS21920 d143be92f2c2072201374f566dd4f00c 470 Gene3D G3DSA:3.40.640.10 133 348 1.6E-68 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS21920 d143be92f2c2072201374f566dd4f00c 470 Gene3D G3DSA:1.10.10.10 1 69 2.9E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS21920 d143be92f2c2072201374f566dd4f00c 470 SUPERFAMILY SSF53383 84 465 1.63E-91 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS21920 d143be92f2c2072201374f566dd4f00c 470 Pfam PF00155 Aminotransferase class I and II 122 461 2.1E-36 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RG43_RS21920 d143be92f2c2072201374f566dd4f00c 470 SUPERFAMILY SSF46785 1 70 4.72E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS21920 d143be92f2c2072201374f566dd4f00c 470 SMART SM00345 7 66 1.2E-23 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS24000 d7d47cf74a13b82ab1ce4a1de581fc4c 833 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 363 653 1.8E-113 T 09-03-2017 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 RG43_RS24000 d7d47cf74a13b82ab1ce4a1de581fc4c 833 Gene3D G3DSA:3.30.1340.10 6 89 1.9E-19 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like RG43_RS24000 d7d47cf74a13b82ab1ce4a1de581fc4c 833 Gene3D G3DSA:3.50.30.10 245 365 2.1E-30 T 09-03-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RG43_RS24000 d7d47cf74a13b82ab1ce4a1de581fc4c 833 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 559 574 3.2E-20 T 09-03-2017 RG43_RS24000 d7d47cf74a13b82ab1ce4a1de581fc4c 833 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 612 624 3.2E-20 T 09-03-2017 RG43_RS24000 d7d47cf74a13b82ab1ce4a1de581fc4c 833 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 576 591 3.2E-20 T 09-03-2017 RG43_RS24000 d7d47cf74a13b82ab1ce4a1de581fc4c 833 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 405 424 3.2E-20 T 09-03-2017 RG43_RS24000 d7d47cf74a13b82ab1ce4a1de581fc4c 833 SUPERFAMILY SSF55594 5 89 1.96E-16 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like RG43_RS24000 d7d47cf74a13b82ab1ce4a1de581fc4c 833 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 689 829 1.6E-30 T 09-03-2017 IPR002178 PTS EIIA type-2 domain RG43_RS24000 d7d47cf74a13b82ab1ce4a1de581fc4c 833 Gene3D G3DSA:3.20.20.60 370 680 5.3E-102 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RG43_RS24000 d7d47cf74a13b82ab1ce4a1de581fc4c 833 Pfam PF00391 PEP-utilising enzyme, mobile domain 264 337 1.3E-15 T 09-03-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RG43_RS24000 d7d47cf74a13b82ab1ce4a1de581fc4c 833 Gene3D G3DSA:3.40.930.10 688 830 1.1E-40 T 09-03-2017 IPR002178 PTS EIIA type-2 domain RG43_RS24000 d7d47cf74a13b82ab1ce4a1de581fc4c 833 SUPERFAMILY SSF52009 236 355 1.1E-24 T 09-03-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RG43_RS24000 d7d47cf74a13b82ab1ce4a1de581fc4c 833 Pfam PF00381 PTS HPr component phosphorylation site 7 84 3.5E-11 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like RG43_RS24000 d7d47cf74a13b82ab1ce4a1de581fc4c 833 SUPERFAMILY SSF51621 366 661 2.09E-97 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RG43_RS24000 d7d47cf74a13b82ab1ce4a1de581fc4c 833 SUPERFAMILY SSF47831 147 254 1.19E-17 T 09-03-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RG43_RS24000 d7d47cf74a13b82ab1ce4a1de581fc4c 833 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 559 577 - T 09-03-2017 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 RG43_RS24000 d7d47cf74a13b82ab1ce4a1de581fc4c 833 SUPERFAMILY SSF55804 689 828 1.83E-29 T 09-03-2017 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 RG43_RS24000 d7d47cf74a13b82ab1ce4a1de581fc4c 833 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 296 307 - T 09-03-2017 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 RG43_RS24000 d7d47cf74a13b82ab1ce4a1de581fc4c 833 Pfam PF05524 PEP-utilising enzyme, N-terminal 144 237 2.9E-10 T 09-03-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RG43_RS24000 d7d47cf74a13b82ab1ce4a1de581fc4c 833 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 181 677 9.3E-144 T 09-03-2017 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 RG43_RS24000 d7d47cf74a13b82ab1ce4a1de581fc4c 833 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 09-03-2017 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site RG43_RS24000 d7d47cf74a13b82ab1ce4a1de581fc4c 833 Gene3D G3DSA:1.10.274.10 149 244 1.0E-16 T 09-03-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RG43_RS26450 206cddacc640ee055a1e81d313a05a11 269 SMART SM00382 34 223 6.5E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS26450 206cddacc640ee055a1e81d313a05a11 269 Pfam PF00005 ABC transporter 26 173 1.9E-32 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS26450 206cddacc640ee055a1e81d313a05a11 269 SUPERFAMILY SSF52540 10 230 4.5E-59 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS26450 206cddacc640ee055a1e81d313a05a11 269 Gene3D G3DSA:3.40.50.300 10 229 4.1E-60 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS04075 206cddacc640ee055a1e81d313a05a11 269 SMART SM00382 34 223 6.5E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS04075 206cddacc640ee055a1e81d313a05a11 269 Pfam PF00005 ABC transporter 26 173 1.9E-32 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS04075 206cddacc640ee055a1e81d313a05a11 269 SUPERFAMILY SSF52540 10 230 4.5E-59 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS04075 206cddacc640ee055a1e81d313a05a11 269 Gene3D G3DSA:3.40.50.300 10 229 4.1E-60 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS15345 09f35e181a19f35924802b7403803429 493 SMART SM00155 384 411 3.4E-7 T 09-03-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 RG43_RS15345 09f35e181a19f35924802b7403803429 493 SMART SM00155 145 172 0.013 T 09-03-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 RG43_RS15345 09f35e181a19f35924802b7403803429 493 Gene3D G3DSA:3.30.870.10 12 206 1.8E-46 T 09-03-2017 RG43_RS15345 09f35e181a19f35924802b7403803429 493 Gene3D G3DSA:3.30.870.10 212 458 1.4E-62 T 09-03-2017 RG43_RS15345 09f35e181a19f35924802b7403803429 493 Pfam PF13091 PLD-like domain 295 437 1.2E-27 T 09-03-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 RG43_RS15345 09f35e181a19f35924802b7403803429 493 Pfam PF13091 PLD-like domain 59 204 8.3E-15 T 09-03-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 RG43_RS15345 09f35e181a19f35924802b7403803429 493 Hamap MF_01918 Cardiolipin synthase C [clsC]. 60 493 74.269 T 09-03-2017 IPR030871 Cardiolipin synthase C GO:0032049|GO:0090483 RG43_RS15345 09f35e181a19f35924802b7403803429 493 SUPERFAMILY SSF56024 225 457 1.95E-36 T 09-03-2017 RG43_RS15345 09f35e181a19f35924802b7403803429 493 SUPERFAMILY SSF56024 34 212 1.48E-39 T 09-03-2017 RG43_RS16465 1f13038718846f35edbd5e67ee271f03 303 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 25 78 3.6E-15 T 09-03-2017 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RG43_RS16465 1f13038718846f35edbd5e67ee271f03 303 SUPERFAMILY SSF161098 96 283 8.37E-29 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS16465 1f13038718846f35edbd5e67ee271f03 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 302 8.6E-31 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS16465 1f13038718846f35edbd5e67ee271f03 303 Gene3D G3DSA:1.10.3720.10 93 299 1.2E-28 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS07860 184e29b629f7ea11b305fe33ee3c7c5f 306 PIRSF PIRSF026649 3 305 6.7E-92 T 09-03-2017 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 RG43_RS07860 184e29b629f7ea11b305fe33ee3c7c5f 306 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 5 305 5.6E-143 T 09-03-2017 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 RG43_RS07860 184e29b629f7ea11b305fe33ee3c7c5f 306 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 4 305 49.162 T 09-03-2017 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 RG43_RS07860 184e29b629f7ea11b305fe33ee3c7c5f 306 Hamap MF_01943 Lipid A biosynthesis palmitoleoyltransferase [lpxP]. 3 305 69.42 T 09-03-2017 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP GO:0008951|GO:0009409|GO:0036104 KEGG: 00600+2.3.1.24 RG43_RS07860 184e29b629f7ea11b305fe33ee3c7c5f 306 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 5 296 1.2E-117 T 09-03-2017 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 RG43_RS20510 0ea44a49b70285717a7432533a30b5a1 134 Hamap MF_00976 Outer membrane lipoprotein RcsF [rcsF]. 1 133 36.266 T 09-03-2017 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 RG43_RS20510 0ea44a49b70285717a7432533a30b5a1 134 Pfam PF16358 RcsF lipoprotein 29 132 7.6E-50 T 09-03-2017 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 RG43_RS11705 841f1f37037fd0e0c4d01dd1a6da3241 273 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 211 252 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RG43_RS11705 841f1f37037fd0e0c4d01dd1a6da3241 273 SMART SM00342 173 256 3.7E-20 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS11705 841f1f37037fd0e0c4d01dd1a6da3241 273 Gene3D G3DSA:1.10.10.60 222 255 2.2E-7 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS11705 841f1f37037fd0e0c4d01dd1a6da3241 273 Gene3D G3DSA:2.60.120.10 32 93 1.0E-8 T 09-03-2017 IPR014710 RmlC-like jelly roll fold RG43_RS11705 841f1f37037fd0e0c4d01dd1a6da3241 273 SUPERFAMILY SSF51182 23 181 4.29E-13 T 09-03-2017 IPR011051 RmlC-like cupin domain RG43_RS11705 841f1f37037fd0e0c4d01dd1a6da3241 273 SUPERFAMILY SSF46689 213 258 1.97E-6 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS11705 841f1f37037fd0e0c4d01dd1a6da3241 273 Gene3D G3DSA:1.10.10.60 155 212 1.1E-6 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS11705 841f1f37037fd0e0c4d01dd1a6da3241 273 Pfam PF02311 AraC-like ligand binding domain 22 96 5.1E-5 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RG43_RS11705 841f1f37037fd0e0c4d01dd1a6da3241 273 Pfam PF12833 Helix-turn-helix domain 180 256 1.7E-17 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS13185 75cef5c27f840a1ec1b9d27616b76458 294 SUPERFAMILY SSF54862 26 262 4.92E-72 T 09-03-2017 RG43_RS13185 75cef5c27f840a1ec1b9d27616b76458 294 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 7 290 1.2E-145 T 09-03-2017 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 RG43_RS13185 75cef5c27f840a1ec1b9d27616b76458 294 Pfam PF12800 4Fe-4S binding domain 38 50 0.11 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS13185 75cef5c27f840a1ec1b9d27616b76458 294 PIRSF PIRSF036298 1 294 6.0E-164 T 09-03-2017 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 RG43_RS13185 75cef5c27f840a1ec1b9d27616b76458 294 Pfam PF09163 Formate dehydrogenase N, transmembrane 246 289 3.5E-20 T 09-03-2017 IPR015246 Formate dehydrogenase, transmembrane RG43_RS13185 75cef5c27f840a1ec1b9d27616b76458 294 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 133 144 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS13185 75cef5c27f840a1ec1b9d27616b76458 294 Gene3D G3DSA:3.30.70.20 104 137 1.7E-11 T 09-03-2017 RG43_RS13185 75cef5c27f840a1ec1b9d27616b76458 294 Pfam PF13247 4Fe-4S dicluster domain 92 188 1.1E-25 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS13185 75cef5c27f840a1ec1b9d27616b76458 294 Gene3D G3DSA:3.30.70.20 173 227 4.4E-37 T 09-03-2017 RG43_RS13185 75cef5c27f840a1ec1b9d27616b76458 294 Gene3D G3DSA:3.30.70.20 30 103 4.4E-37 T 09-03-2017 RG43_RS13185 75cef5c27f840a1ec1b9d27616b76458 294 Gene3D G3DSA:3.30.70.20 138 172 1.3E-15 T 09-03-2017 RG43_RS13185 75cef5c27f840a1ec1b9d27616b76458 294 Gene3D G3DSA:1.20.5.480 247 294 2.8E-25 T 09-03-2017 RG43_RS16380 fb146b41772c60c285dbac79ec613c8a 561 Gene3D G3DSA:3.30.70.1450 303 374 6.8E-7 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RG43_RS16380 fb146b41772c60c285dbac79ec613c8a 561 Pfam PF06826 Predicted Permease Membrane Region 17 182 2.3E-40 T 09-03-2017 IPR006512 YidE/YbjL duplication RG43_RS16380 fb146b41772c60c285dbac79ec613c8a 561 Pfam PF06826 Predicted Permease Membrane Region 385 555 6.2E-43 T 09-03-2017 IPR006512 YidE/YbjL duplication RG43_RS16380 fb146b41772c60c285dbac79ec613c8a 561 Pfam PF02080 TrkA-C domain 229 281 1.4E-8 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RG43_RS16380 fb146b41772c60c285dbac79ec613c8a 561 Pfam PF02080 TrkA-C domain 304 371 5.7E-9 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RG43_RS16380 fb146b41772c60c285dbac79ec613c8a 561 SUPERFAMILY SSF116726 291 374 2.09E-11 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RG43_RS16380 fb146b41772c60c285dbac79ec613c8a 561 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 390 541 4.6E-44 T 09-03-2017 IPR006512 YidE/YbjL duplication RG43_RS16380 fb146b41772c60c285dbac79ec613c8a 561 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 169 5.5E-38 T 09-03-2017 IPR006512 YidE/YbjL duplication RG43_RS16380 fb146b41772c60c285dbac79ec613c8a 561 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 557 57.625 T 09-03-2017 IPR023017 Transport protein YbjL, putative RG43_RS16380 fb146b41772c60c285dbac79ec613c8a 561 Gene3D G3DSA:3.30.70.1450 229 282 2.0E-8 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RG43_RS16380 fb146b41772c60c285dbac79ec613c8a 561 SUPERFAMILY SSF116726 227 282 1.7E-10 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RG43_RS11260 e638ff5532e9bb2e5088132297b7e5c2 310 Gene3D G3DSA:3.40.50.1980 16 197 6.6E-45 T 09-03-2017 RG43_RS11260 e638ff5532e9bb2e5088132297b7e5c2 310 PRINTS PR00690 Adhesin family signature 249 267 4.4E-8 T 09-03-2017 IPR006128 Adhesion lipoprotein GO:0007155 RG43_RS11260 e638ff5532e9bb2e5088132297b7e5c2 310 PRINTS PR00690 Adhesin family signature 69 86 4.4E-8 T 09-03-2017 IPR006128 Adhesion lipoprotein GO:0007155 RG43_RS11260 e638ff5532e9bb2e5088132297b7e5c2 310 PRINTS PR00690 Adhesin family signature 56 69 4.4E-8 T 09-03-2017 IPR006128 Adhesion lipoprotein GO:0007155 RG43_RS11260 e638ff5532e9bb2e5088132297b7e5c2 310 PRINTS PR00690 Adhesin family signature 196 217 4.4E-8 T 09-03-2017 IPR006128 Adhesion lipoprotein GO:0007155 RG43_RS11260 e638ff5532e9bb2e5088132297b7e5c2 310 Gene3D G3DSA:3.40.50.1980 198 308 2.2E-31 T 09-03-2017 RG43_RS11260 e638ff5532e9bb2e5088132297b7e5c2 310 SUPERFAMILY SSF53807 27 308 1.62E-74 T 09-03-2017 RG43_RS11260 e638ff5532e9bb2e5088132297b7e5c2 310 Pfam PF01297 Zinc-uptake complex component A periplasmic 28 306 2.9E-57 T 09-03-2017 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 RG43_RS18165 68562fb106554d1a60b5510887eed9c3 400 Pfam PF00756 Putative esterase 172 391 7.5E-50 T 09-03-2017 IPR000801 Putative esterase Reactome: R-HSA-156590 RG43_RS18165 68562fb106554d1a60b5510887eed9c3 400 Gene3D G3DSA:3.40.50.1820 146 395 3.4E-70 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS18165 68562fb106554d1a60b5510887eed9c3 400 SUPERFAMILY SSF81296 5 150 3.08E-53 T 09-03-2017 IPR014756 Immunoglobulin E-set RG43_RS18165 68562fb106554d1a60b5510887eed9c3 400 Gene3D G3DSA:2.60.40.10 3 144 1.6E-59 T 09-03-2017 IPR013783 Immunoglobulin-like fold RG43_RS18165 68562fb106554d1a60b5510887eed9c3 400 Pfam PF11806 Domain of unknown function (DUF3327) 29 155 1.2E-43 T 09-03-2017 IPR021764 Enterochelin esterase, N-terminal GO:0005506|GO:0005737|GO:0006826|GO:0008849 RG43_RS18165 68562fb106554d1a60b5510887eed9c3 400 SUPERFAMILY SSF53474 155 393 4.61E-48 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS10870 c4cc1570b2d5c913fc4609fc749be098 240 Pfam PF00196 Bacterial regulatory proteins, luxR family 179 234 8.2E-23 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS10870 c4cc1570b2d5c913fc4609fc749be098 240 SUPERFAMILY SSF75516 8 170 7.19E-36 T 09-03-2017 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain RG43_RS10870 c4cc1570b2d5c913fc4609fc749be098 240 Gene3D G3DSA:3.30.450.80 7 182 9.7E-44 T 09-03-2017 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain RG43_RS10870 c4cc1570b2d5c913fc4609fc749be098 240 SMART SM00421 177 234 1.1E-18 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS10870 c4cc1570b2d5c913fc4609fc749be098 240 Gene3D G3DSA:1.10.10.10 183 240 1.6E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS10870 c4cc1570b2d5c913fc4609fc749be098 240 SUPERFAMILY SSF46894 162 240 5.1E-18 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RG43_RS10870 c4cc1570b2d5c913fc4609fc749be098 240 Pfam PF03472 Autoinducer binding domain 23 159 4.8E-33 T 09-03-2017 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain RG43_RS10870 c4cc1570b2d5c913fc4609fc749be098 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 194 210 1.1E-11 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS10870 c4cc1570b2d5c913fc4609fc749be098 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 194 1.1E-11 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS10870 c4cc1570b2d5c913fc4609fc749be098 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 210 222 1.1E-11 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS10870 c4cc1570b2d5c913fc4609fc749be098 240 ProSitePatterns PS00622 LuxR-type HTH domain signature. 194 221 - T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS04990 77050e11da421eabb42148150ba51165 138 SMART SM00732 3 103 1.2E-43 T 09-03-2017 IPR006641 YqgF/RNase H-like domain GO:0006139 RG43_RS04990 77050e11da421eabb42148150ba51165 138 Pfam PF03652 Holliday junction resolvase 4 135 5.3E-44 T 09-03-2017 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 RG43_RS04990 77050e11da421eabb42148150ba51165 138 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 3 138 26.665 T 09-03-2017 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 RG43_RS04990 77050e11da421eabb42148150ba51165 138 SUPERFAMILY SSF53098 3 136 7.44E-44 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS04990 77050e11da421eabb42148150ba51165 138 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 6 135 8.7E-63 T 09-03-2017 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 RG43_RS04990 77050e11da421eabb42148150ba51165 138 Gene3D G3DSA:3.30.420.140 3 136 8.7E-49 T 09-03-2017 IPR006641 YqgF/RNase H-like domain GO:0006139 RG43_RS03280 ac792f053e8cc228bce0a7b69d3fbb4f 377 Gene3D G3DSA:2.30.40.10 4 59 4.0E-4 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RG43_RS03280 ac792f053e8cc228bce0a7b69d3fbb4f 377 Pfam PF01979 Amidohydrolase family 47 361 2.3E-17 T 09-03-2017 IPR006680 Amidohydrolase-related GO:0016787 RG43_RS03280 ac792f053e8cc228bce0a7b69d3fbb4f 377 PIRSF PIRSF038994 1 376 5.5E-114 T 09-03-2017 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 RG43_RS03280 ac792f053e8cc228bce0a7b69d3fbb4f 377 Gene3D G3DSA:3.20.20.140 60 345 4.2E-104 T 09-03-2017 RG43_RS03280 ac792f053e8cc228bce0a7b69d3fbb4f 377 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 4 372 7.1E-87 T 09-03-2017 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 RG43_RS03280 ac792f053e8cc228bce0a7b69d3fbb4f 377 SUPERFAMILY SSF51338 346 374 1.77E-7 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RG43_RS03280 ac792f053e8cc228bce0a7b69d3fbb4f 377 SUPERFAMILY SSF51338 4 49 1.77E-7 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RG43_RS03280 ac792f053e8cc228bce0a7b69d3fbb4f 377 SUPERFAMILY SSF51556 51 346 1.7E-95 T 09-03-2017 IPR032466 Metal-dependent hydrolase RG43_RS15800 2dd621f05d0bc87124ac661055df8af8 209 Gene3D G3DSA:3.30.1460.30 5 107 3.7E-34 T 09-03-2017 IPR007076 TfoX, N-terminal RG43_RS15800 2dd621f05d0bc87124ac661055df8af8 209 Gene3D G3DSA:1.10.150.20 117 205 2.3E-29 T 09-03-2017 RG43_RS15800 2dd621f05d0bc87124ac661055df8af8 209 Pfam PF04994 TfoX C-terminal domain 116 194 1.5E-26 T 09-03-2017 IPR007077 TfoX, C-terminal RG43_RS15800 2dd621f05d0bc87124ac661055df8af8 209 PIRSF PIRSF028788 1 205 2.0E-55 T 09-03-2017 IPR026256 Transcriptional regulator, TfoX/Sxy-type RG43_RS15800 2dd621f05d0bc87124ac661055df8af8 209 Pfam PF04993 TfoX N-terminal domain 14 106 9.1E-26 T 09-03-2017 IPR007076 TfoX, N-terminal RG43_RS15800 2dd621f05d0bc87124ac661055df8af8 209 SUPERFAMILY SSF159894 13 107 1.44E-26 T 09-03-2017 RG43_RS00800 7bf67931b53adc91df960d34e824f50a 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 4.8E-12 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS00800 7bf67931b53adc91df960d34e824f50a 324 Gene3D G3DSA:3.40.190.10 146 186 4.3E-7 T 09-03-2017 RG43_RS00800 7bf67931b53adc91df960d34e824f50a 324 Pfam PF03466 LysR substrate binding domain 95 303 1.8E-16 T 09-03-2017 IPR005119 LysR, substrate-binding RG43_RS00800 7bf67931b53adc91df960d34e824f50a 324 SUPERFAMILY SSF53850 94 307 4.89E-21 T 09-03-2017 RG43_RS00800 7bf67931b53adc91df960d34e824f50a 324 Gene3D G3DSA:3.40.190.10 187 273 3.9E-6 T 09-03-2017 RG43_RS00800 7bf67931b53adc91df960d34e824f50a 324 SUPERFAMILY SSF46785 5 115 4.99E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS00800 7bf67931b53adc91df960d34e824f50a 324 Gene3D G3DSA:1.10.10.10 7 91 1.7E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS19520 69d57e43afd89d3de060e97f23691e91 231 Gene3D G3DSA:3.40.50.10420 42 228 7.5E-46 T 09-03-2017 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain RG43_RS19520 69d57e43afd89d3de060e97f23691e91 231 SUPERFAMILY SSF100950 41 229 1.8E-37 T 09-03-2017 RG43_RS19520 69d57e43afd89d3de060e97f23691e91 231 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 65 228 1.4E-29 T 09-03-2017 IPR003741 LUD domain RG43_RS25655 b8c84d6f36a917c175c68a7edb9861d4 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 243 6.7E-41 T 09-03-2017 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS25655 b8c84d6f36a917c175c68a7edb9861d4 366 Gene3D G3DSA:3.10.150.10 249 366 4.9E-39 T 09-03-2017 RG43_RS25655 b8c84d6f36a917c175c68a7edb9861d4 366 SUPERFAMILY SSF55979 1 121 5.84E-26 T 09-03-2017 RG43_RS25655 b8c84d6f36a917c175c68a7edb9861d4 366 PIRSF PIRSF000804 1 366 7.2E-119 T 09-03-2017 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS25655 b8c84d6f36a917c175c68a7edb9861d4 366 Gene3D G3DSA:3.10.150.10 122 248 1.2E-38 T 09-03-2017 RG43_RS25655 b8c84d6f36a917c175c68a7edb9861d4 366 SMART SM00480 17 362 8.4E-176 T 09-03-2017 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS25655 b8c84d6f36a917c175c68a7edb9861d4 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 3.0E-114 T 09-03-2017 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS25655 b8c84d6f36a917c175c68a7edb9861d4 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 1.3E-45 T 09-03-2017 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS25655 b8c84d6f36a917c175c68a7edb9861d4 366 SUPERFAMILY SSF55979 125 244 5.5E-30 T 09-03-2017 RG43_RS25655 b8c84d6f36a917c175c68a7edb9861d4 366 Gene3D G3DSA:3.10.150.10 1 121 1.3E-32 T 09-03-2017 RG43_RS25655 b8c84d6f36a917c175c68a7edb9861d4 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 120 7.9E-41 T 09-03-2017 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS25655 b8c84d6f36a917c175c68a7edb9861d4 366 SUPERFAMILY SSF55979 245 366 6.77E-38 T 09-03-2017 RG43_RS12800 3e48d35d80e8bf860898ee9e49b2d544 486 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 215 227 - T 09-03-2017 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 RG43_RS12800 3e48d35d80e8bf860898ee9e49b2d544 486 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 23 185 4.1E-51 T 09-03-2017 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 RG43_RS12800 3e48d35d80e8bf860898ee9e49b2d544 486 PRINTS PR00084 Mannitol dehydrogenase signature 176 189 1.6E-21 T 09-03-2017 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 RG43_RS12800 3e48d35d80e8bf860898ee9e49b2d544 486 PRINTS PR00084 Mannitol dehydrogenase signature 245 260 1.6E-21 T 09-03-2017 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 RG43_RS12800 3e48d35d80e8bf860898ee9e49b2d544 486 PRINTS PR00084 Mannitol dehydrogenase signature 215 228 1.6E-21 T 09-03-2017 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 RG43_RS12800 3e48d35d80e8bf860898ee9e49b2d544 486 PRINTS PR00084 Mannitol dehydrogenase signature 24 34 1.6E-21 T 09-03-2017 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 RG43_RS12800 3e48d35d80e8bf860898ee9e49b2d544 486 SUPERFAMILY SSF51735 5 278 3.82E-95 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS12800 3e48d35d80e8bf860898ee9e49b2d544 486 SUPERFAMILY SSF48179 280 483 1.29E-67 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RG43_RS12800 3e48d35d80e8bf860898ee9e49b2d544 486 Gene3D G3DSA:1.10.1040.10 279 483 1.3E-77 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RG43_RS12800 3e48d35d80e8bf860898ee9e49b2d544 486 Gene3D G3DSA:3.40.50.720 5 278 5.7E-112 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS12800 3e48d35d80e8bf860898ee9e49b2d544 486 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 213 459 1.9E-103 T 09-03-2017 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 RG43_RS13550 09bbf9b2810e0e7fc2c94e97b1593b44 585 Gene3D G3DSA:3.40.50.150 401 565 1.1E-13 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS13550 09bbf9b2810e0e7fc2c94e97b1593b44 585 Gene3D G3DSA:3.40.50.1820 16 279 4.6E-36 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS13550 09bbf9b2810e0e7fc2c94e97b1593b44 585 Pfam PF12146 Serine aminopeptidase, S33 32 266 1.2E-64 T 09-03-2017 IPR022742 Serine aminopeptidase, S33 RG43_RS13550 09bbf9b2810e0e7fc2c94e97b1593b44 585 SUPERFAMILY SSF53335 392 577 2.58E-17 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS13550 09bbf9b2810e0e7fc2c94e97b1593b44 585 SUPERFAMILY SSF53474 9 279 3.71E-35 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS13550 09bbf9b2810e0e7fc2c94e97b1593b44 585 Pfam PF12147 Putative methyltransferase 275 582 6.2E-148 T 09-03-2017 IPR022744 Methyltransferase domain, putative RG43_RS13805 1af588ecab061652f63260f5427ac61e 360 SUPERFAMILY SSF52540 4 243 4.37E-84 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS13805 1af588ecab061652f63260f5427ac61e 360 SMART SM00382 29 219 6.6E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS13805 1af588ecab061652f63260f5427ac61e 360 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS13805 1af588ecab061652f63260f5427ac61e 360 Pfam PF00005 ABC transporter 21 162 1.6E-28 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS13805 1af588ecab061652f63260f5427ac61e 360 SUPERFAMILY SSF50331 237 359 1.68E-27 T 09-03-2017 IPR008995 Molybdate/tungstate binding, C-terminal RG43_RS13805 1af588ecab061652f63260f5427ac61e 360 Gene3D G3DSA:2.40.50.140 286 344 2.5E-13 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS13805 1af588ecab061652f63260f5427ac61e 360 Pfam PF08402 TOBE domain 281 351 1.5E-8 T 09-03-2017 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 RG43_RS13805 1af588ecab061652f63260f5427ac61e 360 Gene3D G3DSA:3.40.50.300 3 235 5.3E-75 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS13805 1af588ecab061652f63260f5427ac61e 360 Gene3D G3DSA:2.40.50.100 240 285 4.2E-20 T 09-03-2017 RG43_RS13805 1af588ecab061652f63260f5427ac61e 360 Gene3D G3DSA:2.40.50.100 345 359 4.2E-20 T 09-03-2017 RG43_RS18265 a762f0edf0c665626b32a56f7e9bec47 480 Gene3D G3DSA:3.30.565.10 331 479 7.1E-39 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS18265 a762f0edf0c665626b32a56f7e9bec47 480 Pfam PF00672 HAMP domain 191 256 7.4E-9 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RG43_RS18265 a762f0edf0c665626b32a56f7e9bec47 480 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 371 479 1.4E-19 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS18265 a762f0edf0c665626b32a56f7e9bec47 480 SMART SM00388 261 327 1.9E-13 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS18265 a762f0edf0c665626b32a56f7e9bec47 480 SMART SM00387 371 480 2.1E-33 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS18265 a762f0edf0c665626b32a56f7e9bec47 480 SUPERFAMILY SSF55874 316 479 3.01E-40 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS18265 a762f0edf0c665626b32a56f7e9bec47 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 479 1.9E-12 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS18265 a762f0edf0c665626b32a56f7e9bec47 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 426 436 1.9E-12 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS18265 a762f0edf0c665626b32a56f7e9bec47 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 461 1.9E-12 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS18265 a762f0edf0c665626b32a56f7e9bec47 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 422 1.9E-12 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS18265 a762f0edf0c665626b32a56f7e9bec47 480 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 9 479 1.4E-155 T 09-03-2017 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 RG43_RS18265 a762f0edf0c665626b32a56f7e9bec47 480 SUPERFAMILY SSF47384 244 328 2.55E-15 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS18265 a762f0edf0c665626b32a56f7e9bec47 480 SMART SM00304 207 260 4.3E-9 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RG43_RS18265 a762f0edf0c665626b32a56f7e9bec47 480 Pfam PF00512 His Kinase A (phospho-acceptor) domain 262 326 2.0E-10 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS18265 a762f0edf0c665626b32a56f7e9bec47 480 Gene3D G3DSA:1.10.287.130 251 322 5.5E-10 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS20900 ddcefc5cf7066798d72849925d9a7902 182 Gene3D G3DSA:3.40.50.2020 5 177 1.7E-78 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like RG43_RS20900 ddcefc5cf7066798d72849925d9a7902 182 SUPERFAMILY SSF53271 4 177 1.01E-53 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like RG43_RS20900 ddcefc5cf7066798d72849925d9a7902 182 Pfam PF00156 Phosphoribosyl transferase domain 17 164 3.8E-23 T 09-03-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 RG43_RS20900 ddcefc5cf7066798d72849925d9a7902 182 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 11 177 1.4E-73 T 09-03-2017 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 RG43_RS24095 5c777df608588d438894558893bfb5cc 341 Gene3D G3DSA:3.40.50.2300 174 338 8.3E-68 T 09-03-2017 RG43_RS24095 5c777df608588d438894558893bfb5cc 341 Gene3D G3DSA:1.10.260.40 10 65 1.4E-20 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS24095 5c777df608588d438894558893bfb5cc 341 Pfam PF13377 Periplasmic binding protein-like domain 176 337 2.5E-44 T 09-03-2017 RG43_RS24095 5c777df608588d438894558893bfb5cc 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 12 30 - T 09-03-2017 RG43_RS24095 5c777df608588d438894558893bfb5cc 341 SUPERFAMILY SSF53822 68 338 4.91E-92 T 09-03-2017 IPR028082 Periplasmic binding protein-like I RG43_RS24095 5c777df608588d438894558893bfb5cc 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 56 1.6E-19 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS24095 5c777df608588d438894558893bfb5cc 341 SMART SM00354 9 79 1.1E-30 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS24095 5c777df608588d438894558893bfb5cc 341 SUPERFAMILY SSF47413 10 67 7.88E-15 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS24095 5c777df608588d438894558893bfb5cc 341 Gene3D G3DSA:3.40.50.2300 66 173 7.8E-31 T 09-03-2017 RG43_RS05125 aff29f0997aaf745c2d595a81522ee3f 387 Gene3D G3DSA:3.40.50.1260 5 174 2.1E-64 T 09-03-2017 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS05125 aff29f0997aaf745c2d595a81522ee3f 387 PIRSF PIRSF000724 1 387 1.3E-134 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS05125 aff29f0997aaf745c2d595a81522ee3f 387 SUPERFAMILY SSF53748 3 383 8.01E-145 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS05125 aff29f0997aaf745c2d595a81522ee3f 387 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 09-03-2017 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS05125 aff29f0997aaf745c2d595a81522ee3f 387 Pfam PF00162 Phosphoglycerate kinase 6 373 3.1E-138 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS05125 aff29f0997aaf745c2d595a81522ee3f 387 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 1.6E-82 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS05125 aff29f0997aaf745c2d595a81522ee3f 387 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 1.6E-82 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS05125 aff29f0997aaf745c2d595a81522ee3f 387 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 1.6E-82 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS05125 aff29f0997aaf745c2d595a81522ee3f 387 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 1.6E-82 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS05125 aff29f0997aaf745c2d595a81522ee3f 387 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 1.6E-82 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS05125 aff29f0997aaf745c2d595a81522ee3f 387 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 1.6E-82 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS05125 aff29f0997aaf745c2d595a81522ee3f 387 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 1.6E-82 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS05125 aff29f0997aaf745c2d595a81522ee3f 387 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 1.6E-82 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS05125 aff29f0997aaf745c2d595a81522ee3f 387 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 1.6E-82 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS05125 aff29f0997aaf745c2d595a81522ee3f 387 Gene3D G3DSA:3.40.50.1270 175 371 5.6E-81 T 09-03-2017 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS05125 aff29f0997aaf745c2d595a81522ee3f 387 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 39.19 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS09060 25039a1482469b5f2e4756711abe51d9 332 Gene3D G3DSA:3.40.50.2300 25 169 3.1E-40 T 09-03-2017 RG43_RS09060 25039a1482469b5f2e4756711abe51d9 332 Gene3D G3DSA:3.40.50.2300 170 315 1.7E-40 T 09-03-2017 RG43_RS09060 25039a1482469b5f2e4756711abe51d9 332 SUPERFAMILY SSF53822 25 330 2.94E-84 T 09-03-2017 IPR028082 Periplasmic binding protein-like I RG43_RS09060 25039a1482469b5f2e4756711abe51d9 332 Pfam PF13407 Periplasmic binding protein domain 28 299 9.8E-64 T 09-03-2017 IPR025997 Periplasmic binding protein RG43_RS02185 b507935d2be670c04341bbd4e8e2bf76 340 SUPERFAMILY SSF53474 37 312 5.31E-38 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS02185 b507935d2be670c04341bbd4e8e2bf76 340 PIRSF PIRSF005211 5 340 7.9E-112 T 09-03-2017 IPR012020 AB hydrolase 4 family RG43_RS02185 b507935d2be670c04341bbd4e8e2bf76 340 Pfam PF00561 alpha/beta hydrolase fold 73 312 1.7E-30 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 RG43_RS02185 b507935d2be670c04341bbd4e8e2bf76 340 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 239 280 - T 09-03-2017 IPR000952 AB hydrolase 4, conserved site RG43_RS02185 b507935d2be670c04341bbd4e8e2bf76 340 Gene3D G3DSA:3.40.50.1820 260 336 4.3E-28 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS02185 b507935d2be670c04341bbd4e8e2bf76 340 Gene3D G3DSA:3.40.50.1820 55 184 4.3E-28 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS03580 40f1d833c9c433bba2615f883ba25e3b 327 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 6.2E-6 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS03580 40f1d833c9c433bba2615f883ba25e3b 327 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 6.2E-6 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS03580 40f1d833c9c433bba2615f883ba25e3b 327 SUPERFAMILY SSF47413 3 51 7.13E-12 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS03580 40f1d833c9c433bba2615f883ba25e3b 327 Gene3D G3DSA:3.40.50.2300 76 169 4.3E-7 T 09-03-2017 RG43_RS03580 40f1d833c9c433bba2615f883ba25e3b 327 Gene3D G3DSA:3.40.50.2300 170 305 5.4E-35 T 09-03-2017 RG43_RS03580 40f1d833c9c433bba2615f883ba25e3b 327 SUPERFAMILY SSF53822 76 326 1.73E-39 T 09-03-2017 IPR028082 Periplasmic binding protein-like I RG43_RS03580 40f1d833c9c433bba2615f883ba25e3b 327 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 49 8.4E-18 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS03580 40f1d833c9c433bba2615f883ba25e3b 327 Gene3D G3DSA:1.10.260.40 1 58 1.2E-19 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS03580 40f1d833c9c433bba2615f883ba25e3b 327 SMART SM00354 1 74 9.6E-24 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS03580 40f1d833c9c433bba2615f883ba25e3b 327 Pfam PF13377 Periplasmic binding protein-like domain 167 326 7.1E-30 T 09-03-2017 RG43_RS03580 40f1d833c9c433bba2615f883ba25e3b 327 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 09-03-2017 RG43_RS25620 ca47321ff276a44d263a8eea8fbb42a1 454 Gene3D G3DSA:1.20.120.430 248 271 9.3E-60 T 09-03-2017 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 RG43_RS25620 ca47321ff276a44d263a8eea8fbb42a1 454 Gene3D G3DSA:1.20.120.430 384 454 9.3E-60 T 09-03-2017 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 RG43_RS25620 ca47321ff276a44d263a8eea8fbb42a1 454 Gene3D G3DSA:1.20.120.430 122 182 9.3E-60 T 09-03-2017 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 RG43_RS25620 ca47321ff276a44d263a8eea8fbb42a1 454 Pfam PF12631 MnmE helical domain 123 451 5.7E-61 T 09-03-2017 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 RG43_RS25620 ca47321ff276a44d263a8eea8fbb42a1 454 Gene3D G3DSA:3.30.1360.120 1 121 2.3E-42 T 09-03-2017 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 RG43_RS25620 ca47321ff276a44d263a8eea8fbb42a1 454 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 216 370 6.4E-24 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 RG43_RS25620 ca47321ff276a44d263a8eea8fbb42a1 454 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 120 4.4E-34 T 09-03-2017 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 RG43_RS25620 ca47321ff276a44d263a8eea8fbb42a1 454 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 454 33.378 T 09-03-2017 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 RG43_RS25620 ca47321ff276a44d263a8eea8fbb42a1 454 SUPERFAMILY SSF116878 379 454 2.48E-51 T 09-03-2017 RG43_RS25620 ca47321ff276a44d263a8eea8fbb42a1 454 SUPERFAMILY SSF116878 121 220 2.48E-51 T 09-03-2017 RG43_RS25620 ca47321ff276a44d263a8eea8fbb42a1 454 Gene3D G3DSA:3.40.50.300 286 376 1.3E-7 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25620 ca47321ff276a44d263a8eea8fbb42a1 454 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 454 4.8E-101 T 09-03-2017 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 RG43_RS25620 ca47321ff276a44d263a8eea8fbb42a1 454 SUPERFAMILY SSF52540 72 152 2.66E-46 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25620 ca47321ff276a44d263a8eea8fbb42a1 454 SUPERFAMILY SSF52540 188 372 2.66E-46 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25620 ca47321ff276a44d263a8eea8fbb42a1 454 Pfam PF01926 50S ribosome-binding GTPase 218 336 7.7E-25 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 RG43_RS25620 ca47321ff276a44d263a8eea8fbb42a1 454 Gene3D G3DSA:3.40.50.300 201 247 3.1E-8 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS17320 5b4fd6ab5a1cccb32eaadbdfa001c7a0 421 SUPERFAMILY SSF74653 334 421 8.24E-23 T 09-03-2017 RG43_RS17320 5b4fd6ab5a1cccb32eaadbdfa001c7a0 421 TIGRFAM TIGR02794 tolA_full: protein TolA 232 421 2.9E-45 T 09-03-2017 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 RG43_RS17320 5b4fd6ab5a1cccb32eaadbdfa001c7a0 421 TIGRFAM TIGR02794 tolA_full: protein TolA 12 244 2.6E-47 T 09-03-2017 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 RG43_RS17320 5b4fd6ab5a1cccb32eaadbdfa001c7a0 421 Pfam PF06519 TolA C-terminal 326 419 3.9E-38 T 09-03-2017 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 RG43_RS17320 5b4fd6ab5a1cccb32eaadbdfa001c7a0 421 Gene3D G3DSA:3.30.1150.10 323 421 2.6E-45 T 09-03-2017 RG43_RS21680 95f617f01cb2a52a917b666b55e02052 516 TIGRFAM TIGR04040 glycyl_YjjI: glycine radical enzyme, YjjI family 11 504 1.4E-237 T 09-03-2017 IPR016905 Glycyl radical enzyme, HI0521, predicted RG43_RS21680 95f617f01cb2a52a917b666b55e02052 516 PIRSF PIRSF028991 6 516 8.7E-284 T 09-03-2017 IPR016905 Glycyl radical enzyme, HI0521, predicted RG43_RS21680 95f617f01cb2a52a917b666b55e02052 516 Gene3D G3DSA:3.20.70.20 87 253 4.2E-10 T 09-03-2017 RG43_RS21680 95f617f01cb2a52a917b666b55e02052 516 Pfam PF11230 Protein of unknown function (DUF3029) 22 504 4.4E-225 T 09-03-2017 IPR016905 Glycyl radical enzyme, HI0521, predicted RG43_RS21680 95f617f01cb2a52a917b666b55e02052 516 SUPERFAMILY SSF51998 24 470 2.9E-90 T 09-03-2017 RG43_RS12745 fdc4a3001798dbdb27de7737b49613f0 807 Gene3D G3DSA:3.40.50.740 116 195 1.4E-86 T 09-03-2017 RG43_RS12745 fdc4a3001798dbdb27de7737b49613f0 807 Gene3D G3DSA:3.40.50.740 400 645 1.4E-86 T 09-03-2017 RG43_RS12745 fdc4a3001798dbdb27de7737b49613f0 807 SUPERFAMILY SSF50692 632 807 4.07E-38 T 09-03-2017 IPR009010 Aspartate decarboxylase-like domain RG43_RS12745 fdc4a3001798dbdb27de7737b49613f0 807 Gene3D G3DSA:2.20.25.90 51 115 4.4E-16 T 09-03-2017 RG43_RS12745 fdc4a3001798dbdb27de7737b49613f0 807 SMART SM00926 52 111 3.1E-9 T 09-03-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS12745 fdc4a3001798dbdb27de7737b49613f0 807 Pfam PF00384 Molybdopterin oxidoreductase 114 565 1.6E-88 T 09-03-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS12745 fdc4a3001798dbdb27de7737b49613f0 807 Gene3D G3DSA:3.40.228.10 196 399 8.0E-82 T 09-03-2017 RG43_RS12745 fdc4a3001798dbdb27de7737b49613f0 807 Gene3D G3DSA:2.40.40.20 663 807 2.4E-53 T 09-03-2017 RG43_RS12745 fdc4a3001798dbdb27de7737b49613f0 807 SUPERFAMILY SSF53706 53 688 1.44E-172 T 09-03-2017 RG43_RS12745 fdc4a3001798dbdb27de7737b49613f0 807 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 57 76 - T 09-03-2017 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 RG43_RS12745 fdc4a3001798dbdb27de7737b49613f0 807 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 722 749 - T 09-03-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 RG43_RS12745 fdc4a3001798dbdb27de7737b49613f0 807 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 14 807 0.0 T 09-03-2017 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 RG43_RS12745 fdc4a3001798dbdb27de7737b49613f0 807 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 52 111 1.5E-13 T 09-03-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS12745 fdc4a3001798dbdb27de7737b49613f0 807 Pfam PF01568 Molydopterin dinucleotide binding domain 686 799 8.0E-27 T 09-03-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RG43_RS00285 2766fdd4e9e285df2a70f8c10f901f65 121 SUPERFAMILY SSF46689 9 103 3.05E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS00285 2766fdd4e9e285df2a70f8c10f901f65 121 Gene3D G3DSA:1.10.10.60 16 102 6.5E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS00285 2766fdd4e9e285df2a70f8c10f901f65 121 Pfam PF01527 Transposase 8 87 2.4E-22 T 09-03-2017 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RG43_RS20140 2766fdd4e9e285df2a70f8c10f901f65 121 SUPERFAMILY SSF46689 9 103 3.05E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS20140 2766fdd4e9e285df2a70f8c10f901f65 121 Gene3D G3DSA:1.10.10.60 16 102 6.5E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS20140 2766fdd4e9e285df2a70f8c10f901f65 121 Pfam PF01527 Transposase 8 87 2.4E-22 T 09-03-2017 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RG43_RS04570 2766fdd4e9e285df2a70f8c10f901f65 121 SUPERFAMILY SSF46689 9 103 3.05E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS04570 2766fdd4e9e285df2a70f8c10f901f65 121 Gene3D G3DSA:1.10.10.60 16 102 6.5E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS04570 2766fdd4e9e285df2a70f8c10f901f65 121 Pfam PF01527 Transposase 8 87 2.4E-22 T 09-03-2017 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RG43_RS15065 2766fdd4e9e285df2a70f8c10f901f65 121 SUPERFAMILY SSF46689 9 103 3.05E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS15065 2766fdd4e9e285df2a70f8c10f901f65 121 Gene3D G3DSA:1.10.10.60 16 102 6.5E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS15065 2766fdd4e9e285df2a70f8c10f901f65 121 Pfam PF01527 Transposase 8 87 2.4E-22 T 09-03-2017 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RG43_RS10585 2766fdd4e9e285df2a70f8c10f901f65 121 SUPERFAMILY SSF46689 9 103 3.05E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS10585 2766fdd4e9e285df2a70f8c10f901f65 121 Gene3D G3DSA:1.10.10.60 16 102 6.5E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS10585 2766fdd4e9e285df2a70f8c10f901f65 121 Pfam PF01527 Transposase 8 87 2.4E-22 T 09-03-2017 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RG43_RS13025 2766fdd4e9e285df2a70f8c10f901f65 121 SUPERFAMILY SSF46689 9 103 3.05E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS13025 2766fdd4e9e285df2a70f8c10f901f65 121 Gene3D G3DSA:1.10.10.60 16 102 6.5E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS13025 2766fdd4e9e285df2a70f8c10f901f65 121 Pfam PF01527 Transposase 8 87 2.4E-22 T 09-03-2017 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RG43_RS22185 2766fdd4e9e285df2a70f8c10f901f65 121 SUPERFAMILY SSF46689 9 103 3.05E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS22185 2766fdd4e9e285df2a70f8c10f901f65 121 Gene3D G3DSA:1.10.10.60 16 102 6.5E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS22185 2766fdd4e9e285df2a70f8c10f901f65 121 Pfam PF01527 Transposase 8 87 2.4E-22 T 09-03-2017 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RG43_RS25985 2766fdd4e9e285df2a70f8c10f901f65 121 SUPERFAMILY SSF46689 9 103 3.05E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS25985 2766fdd4e9e285df2a70f8c10f901f65 121 Gene3D G3DSA:1.10.10.60 16 102 6.5E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS25985 2766fdd4e9e285df2a70f8c10f901f65 121 Pfam PF01527 Transposase 8 87 2.4E-22 T 09-03-2017 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RG43_RS00665 f93f64fdf3f900b3f6a70f31ea436868 143 Gene3D G3DSA:3.40.250.10 22 142 2.8E-27 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS00665 f93f64fdf3f900b3f6a70f31ea436868 143 SUPERFAMILY SSF52821 15 142 2.62E-30 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS00665 f93f64fdf3f900b3f6a70f31ea436868 143 Pfam PF00581 Rhodanese-like domain 43 133 9.1E-17 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS00665 f93f64fdf3f900b3f6a70f31ea436868 143 SMART SM00450 40 138 9.5E-22 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS19180 d7f69b4c3e11da5846ce1c306fbaad5c 398 SUPERFAMILY SSF53448 32 289 1.48E-43 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS19180 d7f69b4c3e11da5846ce1c306fbaad5c 398 Pfam PF00535 Glycosyl transferase family 2 34 198 2.4E-24 T 09-03-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RG43_RS19180 d7f69b4c3e11da5846ce1c306fbaad5c 398 Gene3D G3DSA:3.90.550.10 35 260 2.0E-28 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS26865 92a139b4f1a3d0bffa471f821118cba1 122 Pfam PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A 19 117 2.2E-52 T 09-03-2017 IPR009320 YagB/YeeU/YfjZ RG43_RS26865 92a139b4f1a3d0bffa471f821118cba1 122 Gene3D G3DSA:3.30.450.20 27 120 2.2E-59 T 09-03-2017 RG43_RS26865 92a139b4f1a3d0bffa471f821118cba1 122 SUPERFAMILY SSF143737 8 118 4.71E-56 T 09-03-2017 RG43_RS25905 92a139b4f1a3d0bffa471f821118cba1 122 Pfam PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A 19 117 2.2E-52 T 09-03-2017 IPR009320 YagB/YeeU/YfjZ RG43_RS25905 92a139b4f1a3d0bffa471f821118cba1 122 Gene3D G3DSA:3.30.450.20 27 120 2.2E-59 T 09-03-2017 RG43_RS25905 92a139b4f1a3d0bffa471f821118cba1 122 SUPERFAMILY SSF143737 8 118 4.71E-56 T 09-03-2017 RG43_RS17905 24eac8a537c66db23cb62001a53e7a53 370 Pfam PF01098 Cell cycle protein 20 364 1.6E-125 T 09-03-2017 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 RG43_RS17905 24eac8a537c66db23cb62001a53e7a53 370 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 321 345 - T 09-03-2017 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 RG43_RS17905 24eac8a537c66db23cb62001a53e7a53 370 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 17 364 3.6E-137 T 09-03-2017 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 RG43_RS21600 6155f47fae283a0a19c639760975874b 645 SUPERFAMILY SSF48435 28 477 1.29E-137 T 09-03-2017 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 RG43_RS21600 6155f47fae283a0a19c639760975874b 645 Pfam PF01464 Transglycosylase SLT domain 483 595 4.1E-34 T 09-03-2017 IPR008258 Transglycosylase SLT domain 1 RG43_RS21600 6155f47fae283a0a19c639760975874b 645 Gene3D G3DSA:1.25.20.10 29 389 3.1E-125 T 09-03-2017 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 RG43_RS21600 6155f47fae283a0a19c639760975874b 645 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 501 529 - T 09-03-2017 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 RG43_RS21600 6155f47fae283a0a19c639760975874b 645 Gene3D G3DSA:1.10.530.10 475 639 2.2E-54 T 09-03-2017 RG43_RS21600 6155f47fae283a0a19c639760975874b 645 SUPERFAMILY SSF53955 479 641 8.13E-52 T 09-03-2017 IPR023346 Lysozyme-like domain RG43_RS21600 6155f47fae283a0a19c639760975874b 645 Pfam PF14718 Soluble lytic murein transglycosylase L domain 407 472 4.4E-23 T 09-03-2017 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 RG43_RS21600 6155f47fae283a0a19c639760975874b 645 Gene3D G3DSA:1.10.1240.20 404 472 4.2E-30 T 09-03-2017 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 RG43_RS19775 af5deee5c020fca97c26064bffd4251d 1159 Pfam PF13550 Putative phage tail protein 330 497 5.9E-40 T 09-03-2017 IPR032876 Tip attachment protein J RG43_RS19775 af5deee5c020fca97c26064bffd4251d 1159 Pfam PF12421 Fibronectin type III protein 977 1118 9.4E-40 T 09-03-2017 IPR021034 Domain of unknown function, DUF3672 RG43_RS19775 af5deee5c020fca97c26064bffd4251d 1159 Pfam PF09327 Domain of unknown function (DUF1983) 873 953 7.4E-22 T 09-03-2017 IPR015406 Domain of unknown function DUF1983 RG43_RS19775 af5deee5c020fca97c26064bffd4251d 1159 SUPERFAMILY SSF49265 617 717 7.8E-6 T 09-03-2017 IPR003961 Fibronectin type III GO:0005515 RG43_RS19775 af5deee5c020fca97c26064bffd4251d 1159 SMART SM00060 618 701 0.12 T 09-03-2017 IPR003961 Fibronectin type III GO:0005515 RG43_RS19775 af5deee5c020fca97c26064bffd4251d 1159 SMART SM00060 714 798 65.0 T 09-03-2017 IPR003961 Fibronectin type III GO:0005515 RG43_RS19775 af5deee5c020fca97c26064bffd4251d 1159 Gene3D G3DSA:2.60.40.10 618 709 3.1E-5 T 09-03-2017 IPR013783 Immunoglobulin-like fold RG43_RS17145 e2387faa70cd298d90148bd61657e263 427 ProSitePatterns PS00503 Pectinesterase signature 2. 280 289 - T 09-03-2017 IPR033131 Pectinesterase, Asp active site KEGG: 00040+3.1.1.11|KEGG: 00500+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 RG43_RS17145 e2387faa70cd298d90148bd61657e263 427 SUPERFAMILY SSF51126 407 420 7.63E-37 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor RG43_RS17145 e2387faa70cd298d90148bd61657e263 427 SUPERFAMILY SSF51126 75 155 7.63E-37 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor RG43_RS17145 e2387faa70cd298d90148bd61657e263 427 SUPERFAMILY SSF51126 192 376 7.63E-37 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor RG43_RS17145 e2387faa70cd298d90148bd61657e263 427 Pfam PF01095 Pectinesterase 194 339 4.1E-11 T 09-03-2017 IPR000070 Pectinesterase, catalytic GO:0005618|GO:0030599|GO:0042545 KEGG: 00040+3.1.1.11|KEGG: 00500+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 RG43_RS17145 e2387faa70cd298d90148bd61657e263 427 Gene3D G3DSA:2.160.20.10 77 423 4.2E-68 T 09-03-2017 IPR012334 Pectin lyase fold RG43_RS05635 ccaa09b0b27c76dc78a6c08ed4443a44 526 Pfam PF02378 Phosphotransferase system, EIIC 14 353 2.6E-75 T 09-03-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 RG43_RS05635 ccaa09b0b27c76dc78a6c08ed4443a44 526 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 412 509 2.3E-17 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RG43_RS05635 ccaa09b0b27c76dc78a6c08ed4443a44 526 Gene3D G3DSA:3.30.1360.60 448 524 2.8E-24 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RG43_RS05635 ccaa09b0b27c76dc78a6c08ed4443a44 526 Pfam PF00367 phosphotransferase system, EIIB 452 484 3.8E-14 T 09-03-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 RG43_RS05635 ccaa09b0b27c76dc78a6c08ed4443a44 526 SUPERFAMILY SSF55604 449 524 5.89E-19 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RG43_RS05635 ccaa09b0b27c76dc78a6c08ed4443a44 526 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 462 479 - T 09-03-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 RG43_RS18870 40dfaf740401daf77830923f8804df5c 303 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 291 4.1E-75 T 09-03-2017 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 RG43_RS18870 40dfaf740401daf77830923f8804df5c 303 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 143 1.3E-24 T 09-03-2017 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 RG43_RS18870 40dfaf740401daf77830923f8804df5c 303 SUPERFAMILY SSF48179 168 289 6.12E-39 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RG43_RS18870 40dfaf740401daf77830923f8804df5c 303 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 168 289 2.7E-37 T 09-03-2017 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 RG43_RS18870 40dfaf740401daf77830923f8804df5c 303 Gene3D G3DSA:1.10.1040.10 175 290 2.7E-45 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RG43_RS18870 40dfaf740401daf77830923f8804df5c 303 SUPERFAMILY SSF51735 1 167 1.6E-60 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS18870 40dfaf740401daf77830923f8804df5c 303 Gene3D G3DSA:3.40.50.720 1 174 8.1E-48 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS23235 b65dd1ed4546c5ff7464b9c9d5c6ad04 127 Pfam PF03918 Cytochrome C biogenesis protein 8 126 1.9E-44 T 09-03-2017 IPR005616 CcmH/CycL/Ccl2/NrfF family RG43_RS23235 b65dd1ed4546c5ff7464b9c9d5c6ad04 127 TIGRFAM TIGR03147 cyt_nit_nrfF: cytochrome c nitrite reductase, accessory protein NrfF 3 127 1.6E-63 T 09-03-2017 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF RG43_RS11775 f77e9e691c31b9aea6fa2978b29ea437 213 SUPERFAMILY SSF52499 4 208 1.96E-54 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RG43_RS11775 f77e9e691c31b9aea6fa2978b29ea437 213 Gene3D G3DSA:3.40.50.850 4 208 4.6E-66 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RG43_RS11775 f77e9e691c31b9aea6fa2978b29ea437 213 Pfam PF00857 Isochorismatase family 5 207 2.3E-37 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RG43_RS09330 742d505b49f90aff415082280023e8ef 248 SUPERFAMILY SSF46785 20 90 2.03E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS09330 742d505b49f90aff415082280023e8ef 248 Gene3D G3DSA:3.40.1410.10 83 247 2.0E-44 T 09-03-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RG43_RS09330 742d505b49f90aff415082280023e8ef 248 SUPERFAMILY SSF64288 75 246 4.24E-40 T 09-03-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RG43_RS09330 742d505b49f90aff415082280023e8ef 248 Pfam PF00392 Bacterial regulatory proteins, gntR family 29 87 4.8E-16 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS09330 742d505b49f90aff415082280023e8ef 248 Pfam PF07702 UTRA domain 108 242 3.0E-35 T 09-03-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RG43_RS09330 742d505b49f90aff415082280023e8ef 248 Gene3D G3DSA:1.10.10.10 20 82 3.4E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS09330 742d505b49f90aff415082280023e8ef 248 SMART SM00866 107 243 4.5E-32 T 09-03-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RG43_RS09330 742d505b49f90aff415082280023e8ef 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 61 8.6E-10 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS09330 742d505b49f90aff415082280023e8ef 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 61 77 8.6E-10 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS09330 742d505b49f90aff415082280023e8ef 248 SMART SM00345 28 87 2.4E-15 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS26605 e779de1bdbddfd7ea682adf7e5758407 295 SUPERFAMILY SSF53474 70 294 2.56E-48 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS26605 e779de1bdbddfd7ea682adf7e5758407 295 Pfam PF01738 Dienelactone hydrolase family 85 294 1.9E-51 T 09-03-2017 IPR002925 Dienelactone hydrolase GO:0016787 RG43_RS26605 e779de1bdbddfd7ea682adf7e5758407 295 Gene3D G3DSA:3.40.50.1820 70 294 3.1E-61 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS04230 e779de1bdbddfd7ea682adf7e5758407 295 SUPERFAMILY SSF53474 70 294 2.56E-48 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS04230 e779de1bdbddfd7ea682adf7e5758407 295 Pfam PF01738 Dienelactone hydrolase family 85 294 1.9E-51 T 09-03-2017 IPR002925 Dienelactone hydrolase GO:0016787 RG43_RS04230 e779de1bdbddfd7ea682adf7e5758407 295 Gene3D G3DSA:3.40.50.1820 70 294 3.1E-61 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS15505 f32afda8bbffe3f14c1dd9b290121171 128 Pfam PF01042 Endoribonuclease L-PSP 13 125 1.4E-32 T 09-03-2017 IPR006175 YjgF/YER057c/UK114 family RG43_RS15505 f32afda8bbffe3f14c1dd9b290121171 128 TIGRFAM TIGR03610 RutC: pyrimidine utilization protein C 1 127 1.2E-75 T 09-03-2017 IPR019898 Putative aminoacrylate peracid reductase RutC RG43_RS15505 f32afda8bbffe3f14c1dd9b290121171 128 Gene3D G3DSA:3.30.1330.40 3 127 1.4E-32 T 09-03-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RG43_RS15505 f32afda8bbffe3f14c1dd9b290121171 128 SUPERFAMILY SSF55298 3 126 3.93E-34 T 09-03-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RG43_RS15505 f32afda8bbffe3f14c1dd9b290121171 128 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 102 120 - T 09-03-2017 IPR019897 RidA, conserved site RG43_RS15505 f32afda8bbffe3f14c1dd9b290121171 128 Hamap MF_00831 Putative aminoacrylate peracid reductase RutC [rutC]. 1 128 44.886 T 09-03-2017 IPR019898 Putative aminoacrylate peracid reductase RutC RG43_RS23615 701c17de0ab211d923870ea3630c4a81 533 ProSitePatterns PS00510 Malate synthase signature. 266 281 - T 09-03-2017 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 RG43_RS23615 701c17de0ab211d923870ea3630c4a81 533 Pfam PF01274 Malate synthase 12 532 2.4E-214 T 09-03-2017 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 RG43_RS23615 701c17de0ab211d923870ea3630c4a81 533 Gene3D G3DSA:1.20.1220.12 414 526 3.0E-38 T 09-03-2017 RG43_RS23615 701c17de0ab211d923870ea3630c4a81 533 Gene3D G3DSA:3.20.20.360 73 413 1.8E-123 T 09-03-2017 RG43_RS23615 701c17de0ab211d923870ea3630c4a81 533 PIRSF PIRSF001363 2 533 1.6E-252 T 09-03-2017 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 RG43_RS23615 701c17de0ab211d923870ea3630c4a81 533 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 24 532 7.0E-251 T 09-03-2017 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 RG43_RS23615 701c17de0ab211d923870ea3630c4a81 533 SUPERFAMILY SSF51645 9 532 3.53E-191 T 09-03-2017 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 RG43_RS03080 4f8341aabbec408d6262598eee5cb3ed 445 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 366 9.4E-33 T 09-03-2017 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS03080 4f8341aabbec408d6262598eee5cb3ed 445 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 442 2.7E-15 T 09-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS03080 4f8341aabbec408d6262598eee5cb3ed 445 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 09-03-2017 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS03080 4f8341aabbec408d6262598eee5cb3ed 445 Gene3D G3DSA:3.30.310.50 359 443 1.5E-16 T 09-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS03080 4f8341aabbec408d6262598eee5cb3ed 445 SUPERFAMILY SSF53738 2 181 1.41E-48 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS03080 4f8341aabbec408d6262598eee5cb3ed 445 Gene3D G3DSA:3.40.120.10 4 151 6.8E-47 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS03080 4f8341aabbec408d6262598eee5cb3ed 445 SUPERFAMILY SSF53738 258 365 2.28E-31 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS03080 4f8341aabbec408d6262598eee5cb3ed 445 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 3.5E-21 T 09-03-2017 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS03080 4f8341aabbec408d6262598eee5cb3ed 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 8.2E-15 T 09-03-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS03080 4f8341aabbec408d6262598eee5cb3ed 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 8.2E-15 T 09-03-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS03080 4f8341aabbec408d6262598eee5cb3ed 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 8.2E-15 T 09-03-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS03080 4f8341aabbec408d6262598eee5cb3ed 445 SUPERFAMILY SSF55957 357 444 1.44E-21 T 09-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS03080 4f8341aabbec408d6262598eee5cb3ed 445 Gene3D G3DSA:3.40.120.10 176 250 5.1E-27 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS03080 4f8341aabbec408d6262598eee5cb3ed 445 Gene3D G3DSA:3.40.120.10 251 358 2.1E-33 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS03080 4f8341aabbec408d6262598eee5cb3ed 445 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 443 1.1E-197 T 09-03-2017 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS03080 4f8341aabbec408d6262598eee5cb3ed 445 SUPERFAMILY SSF53738 156 256 3.49E-30 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS03080 4f8341aabbec408d6262598eee5cb3ed 445 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 445 47.805 T 09-03-2017 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS03080 4f8341aabbec408d6262598eee5cb3ed 445 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 136 3.0E-45 T 09-03-2017 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS25815 4aef5d5ffaa64bb81138a848c65b368b 196 SMART SM00421 135 192 1.7E-25 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS25815 4aef5d5ffaa64bb81138a848c65b368b 196 SUPERFAMILY SSF52172 1 125 7.54E-27 T 09-03-2017 IPR011006 CheY-like superfamily RG43_RS25815 4aef5d5ffaa64bb81138a848c65b368b 196 Pfam PF00072 Response regulator receiver domain 4 112 2.4E-24 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS25815 4aef5d5ffaa64bb81138a848c65b368b 196 SUPERFAMILY SSF46894 130 193 4.42E-20 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RG43_RS25815 4aef5d5ffaa64bb81138a848c65b368b 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 180 1.8E-13 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS25815 4aef5d5ffaa64bb81138a848c65b368b 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 152 1.8E-13 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS25815 4aef5d5ffaa64bb81138a848c65b368b 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 168 1.8E-13 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS25815 4aef5d5ffaa64bb81138a848c65b368b 196 Gene3D G3DSA:3.40.50.2300 1 141 2.1E-31 T 09-03-2017 RG43_RS25815 4aef5d5ffaa64bb81138a848c65b368b 196 Pfam PF00196 Bacterial regulatory proteins, luxR family 136 190 2.4E-23 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS25815 4aef5d5ffaa64bb81138a848c65b368b 196 ProSitePatterns PS00622 LuxR-type HTH domain signature. 152 179 - T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS25815 4aef5d5ffaa64bb81138a848c65b368b 196 Gene3D G3DSA:1.10.10.10 142 192 1.9E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS25815 4aef5d5ffaa64bb81138a848c65b368b 196 SMART SM00448 2 112 4.8E-27 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS21275 857e9636c88ef10d2e4680106fb64d6f 271 SUPERFAMILY SSF46565 131 267 4.29E-31 T 09-03-2017 IPR001623 DnaJ domain RG43_RS21275 857e9636c88ef10d2e4680106fb64d6f 271 SMART SM00271 204 269 5.2E-17 T 09-03-2017 IPR001623 DnaJ domain RG43_RS21275 857e9636c88ef10d2e4680106fb64d6f 271 Gene3D G3DSA:1.10.287.110 209 267 2.7E-14 T 09-03-2017 IPR001623 DnaJ domain RG43_RS21275 857e9636c88ef10d2e4680106fb64d6f 271 Gene3D G3DSA:1.10.3680.10 22 208 3.5E-27 T 09-03-2017 IPR029024 TerB-like RG43_RS21275 857e9636c88ef10d2e4680106fb64d6f 271 Pfam PF00226 DnaJ domain 208 267 7.1E-11 T 09-03-2017 IPR001623 DnaJ domain RG43_RS21275 857e9636c88ef10d2e4680106fb64d6f 271 PRINTS PR00625 DnaJ domain signature 207 225 1.7E-7 T 09-03-2017 IPR001623 DnaJ domain RG43_RS21275 857e9636c88ef10d2e4680106fb64d6f 271 PRINTS PR00625 DnaJ domain signature 249 269 1.7E-7 T 09-03-2017 IPR001623 DnaJ domain RG43_RS21275 857e9636c88ef10d2e4680106fb64d6f 271 PRINTS PR00625 DnaJ domain signature 225 240 1.7E-7 T 09-03-2017 IPR001623 DnaJ domain RG43_RS21275 857e9636c88ef10d2e4680106fb64d6f 271 Pfam PF05099 Tellurite resistance protein TerB 47 170 4.9E-10 T 09-03-2017 IPR007791 Co-chaperone DjlA, N-terminal RG43_RS21275 857e9636c88ef10d2e4680106fb64d6f 271 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 270 38.924 T 09-03-2017 IPR023749 Co-chaperone DjlA GO:0051087 RG43_RS15035 5c4ade0f227cfdfaf3d109d9167d7411 213 SUPERFAMILY SSF52540 1 209 6.28E-54 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS15035 5c4ade0f227cfdfaf3d109d9167d7411 213 Gene3D G3DSA:3.40.50.300 2 209 5.4E-67 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS15035 5c4ade0f227cfdfaf3d109d9167d7411 213 Hamap MF_00165 Thymidylate kinase [tmk]. 4 208 28.446 T 09-03-2017 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 RG43_RS15035 5c4ade0f227cfdfaf3d109d9167d7411 213 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 200 2.5E-70 T 09-03-2017 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 RG43_RS15035 5c4ade0f227cfdfaf3d109d9167d7411 213 Pfam PF02223 Thymidylate kinase 8 200 5.9E-61 T 09-03-2017 RG43_RS15035 5c4ade0f227cfdfaf3d109d9167d7411 213 ProSitePatterns PS01331 Thymidylate kinase signature. 97 109 - T 09-03-2017 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 RG43_RS12655 3e495ad488f90b538c7e934663bb3f4c 314 SUPERFAMILY SSF159871 107 177 8.5E-17 T 09-03-2017 IPR010854 Domain of unknown function DUF1471 RG43_RS12655 3e495ad488f90b538c7e934663bb3f4c 314 SUPERFAMILY SSF159871 3 93 7.46E-22 T 09-03-2017 IPR010854 Domain of unknown function DUF1471 RG43_RS12655 3e495ad488f90b538c7e934663bb3f4c 314 PIRSF PIRSF014774 1 314 2.1E-185 T 09-03-2017 IPR025539 YdgH protein RG43_RS12655 3e495ad488f90b538c7e934663bb3f4c 314 Pfam PF07338 Protein of unknown function (DUF1471) 259 314 2.0E-20 T 09-03-2017 IPR010854 Domain of unknown function DUF1471 RG43_RS12655 3e495ad488f90b538c7e934663bb3f4c 314 Pfam PF07338 Protein of unknown function (DUF1471) 35 90 1.7E-17 T 09-03-2017 IPR010854 Domain of unknown function DUF1471 RG43_RS12655 3e495ad488f90b538c7e934663bb3f4c 314 Pfam PF07338 Protein of unknown function (DUF1471) 119 174 1.1E-17 T 09-03-2017 IPR010854 Domain of unknown function DUF1471 RG43_RS12655 3e495ad488f90b538c7e934663bb3f4c 314 Gene3D G3DSA:3.30.1660.10 249 314 8.0E-23 T 09-03-2017 IPR025543 Dodecin-like RG43_RS12655 3e495ad488f90b538c7e934663bb3f4c 314 Gene3D G3DSA:3.30.1660.10 25 90 2.3E-23 T 09-03-2017 IPR025543 Dodecin-like RG43_RS12655 3e495ad488f90b538c7e934663bb3f4c 314 Gene3D G3DSA:3.30.1660.10 109 175 1.1E-24 T 09-03-2017 IPR025543 Dodecin-like RG43_RS12655 3e495ad488f90b538c7e934663bb3f4c 314 SUPERFAMILY SSF159871 239 314 1.96E-18 T 09-03-2017 IPR010854 Domain of unknown function DUF1471 RG43_RS14970 2ae79839d4d9ea3deab78ca2f283bf01 210 Gene3D G3DSA:1.10.357.10 84 209 1.1E-42 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RG43_RS14970 2ae79839d4d9ea3deab78ca2f283bf01 210 SUPERFAMILY SSF48498 92 206 6.53E-27 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RG43_RS14970 2ae79839d4d9ea3deab78ca2f283bf01 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 3.9E-5 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RG43_RS14970 2ae79839d4d9ea3deab78ca2f283bf01 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 68 3.9E-5 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RG43_RS14970 2ae79839d4d9ea3deab78ca2f283bf01 210 SUPERFAMILY SSF46689 11 83 9.75E-18 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS14970 2ae79839d4d9ea3deab78ca2f283bf01 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 70 1.9E-15 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RG43_RS14970 2ae79839d4d9ea3deab78ca2f283bf01 210 Gene3D G3DSA:1.10.10.60 12 78 3.9E-25 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS01340 aa39c5b205c5c030b34975ee1bc2eaca 176 SUPERFAMILY SSF46894 97 169 4.08E-10 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RG43_RS01340 aa39c5b205c5c030b34975ee1bc2eaca 176 SMART SM00421 113 170 2.4E-12 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS01340 aa39c5b205c5c030b34975ee1bc2eaca 176 Gene3D G3DSA:1.10.10.10 115 168 3.5E-10 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS01340 aa39c5b205c5c030b34975ee1bc2eaca 176 Pfam PF00196 Bacterial regulatory proteins, luxR family 115 168 8.0E-9 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS05800 b264c05bcf652e64087840e0bcf76319 305 Gene3D G3DSA:3.40.190.10 180 258 2.4E-17 T 09-03-2017 RG43_RS05800 b264c05bcf652e64087840e0bcf76319 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.1E-21 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS05800 b264c05bcf652e64087840e0bcf76319 305 SUPERFAMILY SSF53850 93 295 6.05E-42 T 09-03-2017 RG43_RS05800 b264c05bcf652e64087840e0bcf76319 305 Gene3D G3DSA:1.10.10.10 2 88 2.0E-28 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS05800 b264c05bcf652e64087840e0bcf76319 305 SUPERFAMILY SSF46785 3 87 4.75E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS05800 b264c05bcf652e64087840e0bcf76319 305 Gene3D G3DSA:3.40.190.10 94 179 7.7E-37 T 09-03-2017 RG43_RS05800 b264c05bcf652e64087840e0bcf76319 305 Pfam PF03466 LysR substrate binding domain 91 292 5.5E-42 T 09-03-2017 IPR005119 LysR, substrate-binding RG43_RS05800 b264c05bcf652e64087840e0bcf76319 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 3.4E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS05800 b264c05bcf652e64087840e0bcf76319 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 3.4E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS05800 b264c05bcf652e64087840e0bcf76319 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 3.4E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS21990 a717e04650ffcefc943b75db18e5e3df 303 Gene3D G3DSA:3.40.190.10 99 205 1.2E-6 T 09-03-2017 RG43_RS21990 a717e04650ffcefc943b75db18e5e3df 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 71 1.0E-13 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS21990 a717e04650ffcefc943b75db18e5e3df 303 Gene3D G3DSA:1.10.10.10 12 93 9.2E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS21990 a717e04650ffcefc943b75db18e5e3df 303 SUPERFAMILY SSF53850 100 298 1.19E-23 T 09-03-2017 RG43_RS21990 a717e04650ffcefc943b75db18e5e3df 303 SUPERFAMILY SSF46785 12 94 4.59E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS21990 a717e04650ffcefc943b75db18e5e3df 303 Gene3D G3DSA:3.40.190.10 206 264 1.3E-7 T 09-03-2017 RG43_RS21990 a717e04650ffcefc943b75db18e5e3df 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 1.3E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS21990 a717e04650ffcefc943b75db18e5e3df 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 1.3E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS21990 a717e04650ffcefc943b75db18e5e3df 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 1.3E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS21990 a717e04650ffcefc943b75db18e5e3df 303 Pfam PF03466 LysR substrate binding domain 99 297 2.4E-25 T 09-03-2017 IPR005119 LysR, substrate-binding RG43_RS03135 a877afa6369bea0714b17ebf98c3e804 314 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 252 309 2.4E-19 T 09-03-2017 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 RG43_RS03135 a877afa6369bea0714b17ebf98c3e804 314 Gene3D G3DSA:2.30.130.10 250 312 5.0E-29 T 09-03-2017 IPR015947 PUA-like domain RG43_RS03135 a877afa6369bea0714b17ebf98c3e804 314 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 247 4.2E-22 T 09-03-2017 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 RG43_RS03135 a877afa6369bea0714b17ebf98c3e804 314 SUPERFAMILY SSF55120 10 246 7.48E-86 T 09-03-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RG43_RS03135 a877afa6369bea0714b17ebf98c3e804 314 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 11 309 18.967 T 09-03-2017 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 RG43_RS03135 a877afa6369bea0714b17ebf98c3e804 314 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 11 219 2.5E-96 T 09-03-2017 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 RG43_RS03135 a877afa6369bea0714b17ebf98c3e804 314 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 33 180 1.3E-57 T 09-03-2017 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 RG43_RS03135 a877afa6369bea0714b17ebf98c3e804 314 SUPERFAMILY SSF88697 251 310 1.94E-14 T 09-03-2017 IPR015947 PUA-like domain RG43_RS07830 b7a45244624f98cc1f9941a9523dca21 285 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 234 276 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RG43_RS07830 b7a45244624f98cc1f9941a9523dca21 285 SUPERFAMILY SSF46689 233 283 1.08E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS07830 b7a45244624f98cc1f9941a9523dca21 285 SUPERFAMILY SSF46689 181 231 2.6E-5 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS07830 b7a45244624f98cc1f9941a9523dca21 285 Pfam PF12833 Helix-turn-helix domain 204 281 3.0E-19 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS07830 b7a45244624f98cc1f9941a9523dca21 285 Gene3D G3DSA:1.10.10.60 234 279 2.9E-15 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS07830 b7a45244624f98cc1f9941a9523dca21 285 Gene3D G3DSA:1.10.10.60 177 233 3.2E-14 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS07830 b7a45244624f98cc1f9941a9523dca21 285 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 264 280 1.3E-7 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RG43_RS07830 b7a45244624f98cc1f9941a9523dca21 285 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 249 264 1.3E-7 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RG43_RS07830 b7a45244624f98cc1f9941a9523dca21 285 SMART SM00342 197 280 8.7E-33 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS06955 fdb9d9984722ec06a2d3a9fed01b4744 1295 SUPERFAMILY SSF56042 818 1032 5.68E-58 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain RG43_RS06955 fdb9d9984722ec06a2d3a9fed01b4744 1295 SUPERFAMILY SSF109736 155 220 8.11E-22 T 09-03-2017 RG43_RS06955 fdb9d9984722ec06a2d3a9fed01b4744 1295 Pfam PF02769 AIR synthase related protein, C-terminal domain 432 589 8.3E-26 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain RG43_RS06955 fdb9d9984722ec06a2d3a9fed01b4744 1295 Pfam PF02769 AIR synthase related protein, C-terminal domain 831 966 8.0E-14 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain RG43_RS06955 fdb9d9984722ec06a2d3a9fed01b4744 1295 SUPERFAMILY SSF52317 1035 1293 6.98E-100 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like RG43_RS06955 fdb9d9984722ec06a2d3a9fed01b4744 1295 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1039 1292 1.5E-104 T 09-03-2017 RG43_RS06955 fdb9d9984722ec06a2d3a9fed01b4744 1295 Gene3D G3DSA:3.40.50.880 1040 1263 2.9E-12 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like RG43_RS06955 fdb9d9984722ec06a2d3a9fed01b4744 1295 SUPERFAMILY SSF55326 618 816 7.85E-67 T 09-03-2017 RG43_RS06955 fdb9d9984722ec06a2d3a9fed01b4744 1295 SUPERFAMILY SSF56042 432 615 6.73E-52 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain RG43_RS06955 fdb9d9984722ec06a2d3a9fed01b4744 1295 SMART SM01211 1039 1294 5.5E-161 T 09-03-2017 RG43_RS06955 fdb9d9984722ec06a2d3a9fed01b4744 1295 SUPERFAMILY SSF55326 221 428 1.15E-64 T 09-03-2017 RG43_RS06955 fdb9d9984722ec06a2d3a9fed01b4744 1295 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 4 1293 0.0 T 09-03-2017 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 RG43_RS06955 fdb9d9984722ec06a2d3a9fed01b4744 1295 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 2 1295 21.771 T 09-03-2017 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 RG43_RS06955 fdb9d9984722ec06a2d3a9fed01b4744 1295 SUPERFAMILY SSF82697 1 152 5.02E-54 T 09-03-2017 RG43_RS06955 fdb9d9984722ec06a2d3a9fed01b4744 1295 Gene3D G3DSA:3.30.1330.10 645 810 1.0E-16 T 09-03-2017 IPR016188 PurM-like, N-terminal domain RG43_RS06955 fdb9d9984722ec06a2d3a9fed01b4744 1295 Gene3D G3DSA:3.30.1330.10 211 421 1.3E-39 T 09-03-2017 IPR016188 PurM-like, N-terminal domain RG43_RS07655 9675ae45136a897a184c15dedd7ec1c6 323 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 300 1.0E-69 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RG43_RS07655 9675ae45136a897a184c15dedd7ec1c6 323 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 312 1.2E-146 T 09-03-2017 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 RG43_RS07655 9675ae45136a897a184c15dedd7ec1c6 323 Gene3D G3DSA:3.40.50.1100 133 314 7.1E-73 T 09-03-2017 RG43_RS07655 9675ae45136a897a184c15dedd7ec1c6 323 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 09-03-2017 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 RG43_RS07655 9675ae45136a897a184c15dedd7ec1c6 323 Gene3D G3DSA:3.40.50.1100 36 132 1.4E-38 T 09-03-2017 RG43_RS07655 9675ae45136a897a184c15dedd7ec1c6 323 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 312 7.4E-138 T 09-03-2017 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 RG43_RS07655 9675ae45136a897a184c15dedd7ec1c6 323 SUPERFAMILY SSF53686 3 317 1.1E-97 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RG43_RS20100 fc84b0d673eaaad1978b7e5c3a98b626 814 Gene3D G3DSA:1.10.540.10 95 234 5.6E-32 T 09-03-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RG43_RS20100 fc84b0d673eaaad1978b7e5c3a98b626 814 Gene3D G3DSA:2.40.110.10 237 348 2.0E-17 T 09-03-2017 RG43_RS20100 fc84b0d673eaaad1978b7e5c3a98b626 814 Gene3D G3DSA:1.20.140.10 349 505 1.0E-23 T 09-03-2017 RG43_RS20100 fc84b0d673eaaad1978b7e5c3a98b626 814 SUPERFAMILY SSF56645 117 355 3.01E-46 T 09-03-2017 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RG43_RS20100 fc84b0d673eaaad1978b7e5c3a98b626 814 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 147 232 4.8E-16 T 09-03-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RG43_RS20100 fc84b0d673eaaad1978b7e5c3a98b626 814 SUPERFAMILY SSF47203 360 515 5.48E-21 T 09-03-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RG43_RS20100 fc84b0d673eaaad1978b7e5c3a98b626 814 Pfam PF09317 Domain of unknown function (DUF1974) 514 792 2.0E-117 T 09-03-2017 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 RG43_RS20100 fc84b0d673eaaad1978b7e5c3a98b626 814 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 360 504 3.8E-12 T 09-03-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RG43_RS20100 fc84b0d673eaaad1978b7e5c3a98b626 814 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 237 328 9.1E-9 T 09-03-2017 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RG43_RS04100 494460408448b3122703110f76f22d08 104 Gene3D G3DSA:3.30.70.900 1 102 9.9E-41 T 09-03-2017 RG43_RS04100 494460408448b3122703110f76f22d08 104 SUPERFAMILY SSF54909 1 100 8.05E-31 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel RG43_RS04100 494460408448b3122703110f76f22d08 104 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 87 6.1E-29 T 09-03-2017 IPR007138 Antibiotic biosynthesis monooxygenase domain RG43_RS26475 494460408448b3122703110f76f22d08 104 Gene3D G3DSA:3.30.70.900 1 102 9.9E-41 T 09-03-2017 RG43_RS26475 494460408448b3122703110f76f22d08 104 SUPERFAMILY SSF54909 1 100 8.05E-31 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel RG43_RS26475 494460408448b3122703110f76f22d08 104 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 87 6.1E-29 T 09-03-2017 IPR007138 Antibiotic biosynthesis monooxygenase domain RG43_RS23380 4acb9d16a7550979aa171f964e4ba7ed 359 SMART SM01005 234 358 1.2E-62 T 09-03-2017 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RG43_RS23380 4acb9d16a7550979aa171f964e4ba7ed 359 Hamap MF_01201 Alanine racemase. 1 358 34.764 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RG43_RS23380 4acb9d16a7550979aa171f964e4ba7ed 359 PRINTS PR00992 Alanine racemase signature 267 282 7.8E-77 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RG43_RS23380 4acb9d16a7550979aa171f964e4ba7ed 359 PRINTS PR00992 Alanine racemase signature 288 305 7.8E-77 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RG43_RS23380 4acb9d16a7550979aa171f964e4ba7ed 359 PRINTS PR00992 Alanine racemase signature 155 166 7.8E-77 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RG43_RS23380 4acb9d16a7550979aa171f964e4ba7ed 359 PRINTS PR00992 Alanine racemase signature 192 219 7.8E-77 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RG43_RS23380 4acb9d16a7550979aa171f964e4ba7ed 359 PRINTS PR00992 Alanine racemase signature 60 78 7.8E-77 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RG43_RS23380 4acb9d16a7550979aa171f964e4ba7ed 359 PRINTS PR00992 Alanine racemase signature 340 353 7.8E-77 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RG43_RS23380 4acb9d16a7550979aa171f964e4ba7ed 359 PRINTS PR00992 Alanine racemase signature 26 42 7.8E-77 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RG43_RS23380 4acb9d16a7550979aa171f964e4ba7ed 359 PRINTS PR00992 Alanine racemase signature 250 265 7.8E-77 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RG43_RS23380 4acb9d16a7550979aa171f964e4ba7ed 359 PRINTS PR00992 Alanine racemase signature 120 132 7.8E-77 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RG43_RS23380 4acb9d16a7550979aa171f964e4ba7ed 359 Gene3D G3DSA:3.20.20.10 11 212 1.5E-75 T 09-03-2017 IPR029066 PLP-binding barrel RG43_RS23380 4acb9d16a7550979aa171f964e4ba7ed 359 TIGRFAM TIGR00492 alr: alanine racemase 3 359 2.5E-151 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RG43_RS23380 4acb9d16a7550979aa171f964e4ba7ed 359 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 09-03-2017 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RG43_RS23380 4acb9d16a7550979aa171f964e4ba7ed 359 SUPERFAMILY SSF51419 8 235 8.87E-69 T 09-03-2017 IPR029066 PLP-binding barrel RG43_RS23380 4acb9d16a7550979aa171f964e4ba7ed 359 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 2.2E-70 T 09-03-2017 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RG43_RS23380 4acb9d16a7550979aa171f964e4ba7ed 359 SUPERFAMILY SSF50621 228 358 4.19E-44 T 09-03-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 RG43_RS23380 4acb9d16a7550979aa171f964e4ba7ed 359 Gene3D G3DSA:2.40.37.10 213 359 6.6E-55 T 09-03-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 RG43_RS23380 4acb9d16a7550979aa171f964e4ba7ed 359 Pfam PF00842 Alanine racemase, C-terminal domain 234 357 2.6E-37 T 09-03-2017 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RG43_RS08120 f15fefe047982278d47e44c2365339b7 310 Pfam PF05175 Methyltransferase small domain 132 215 2.6E-16 T 09-03-2017 IPR007848 Methyltransferase small domain GO:0008168 RG43_RS08120 f15fefe047982278d47e44c2365339b7 310 PIRSF PIRSF037167 1 307 3.2E-151 T 09-03-2017 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 RG43_RS08120 f15fefe047982278d47e44c2365339b7 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 09-03-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RG43_RS08120 f15fefe047982278d47e44c2365339b7 310 SUPERFAMILY SSF53335 15 293 2.76E-54 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS08120 f15fefe047982278d47e44c2365339b7 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 1.7E-139 T 09-03-2017 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 RG43_RS08120 f15fefe047982278d47e44c2365339b7 310 Gene3D G3DSA:3.40.50.150 108 289 3.1E-53 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS08120 f15fefe047982278d47e44c2365339b7 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 14 305 2.2E-110 T 09-03-2017 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 RG43_RS08120 f15fefe047982278d47e44c2365339b7 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 54.742 T 09-03-2017 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 RG43_RS08120 f15fefe047982278d47e44c2365339b7 310 Gene3D G3DSA:1.10.8.10 15 106 1.0E-6 T 09-03-2017 RG43_RS01770 bf1a9c37700a212a60134e0981451d56 187 SUPERFAMILY SSF49401 32 187 6.46E-32 T 09-03-2017 IPR008966 Adhesion domain RG43_RS01770 bf1a9c37700a212a60134e0981451d56 187 Pfam PF00419 Fimbrial protein 34 187 1.1E-21 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS01770 bf1a9c37700a212a60134e0981451d56 187 Gene3D G3DSA:2.60.40.1090 31 187 4.6E-38 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS21535 a9d66c8a14cfec0a307cb74782692995 820 Gene3D G3DSA:3.40.1160.10 111 300 1.8E-68 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase RG43_RS21535 a9d66c8a14cfec0a307cb74782692995 820 Gene3D G3DSA:3.40.1160.10 1 49 1.8E-68 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase RG43_RS21535 a9d66c8a14cfec0a307cb74782692995 820 Gene3D G3DSA:3.40.50.720 464 635 1.4E-66 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS21535 a9d66c8a14cfec0a307cb74782692995 820 SUPERFAMILY SSF53633 1 296 1.57E-73 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase RG43_RS21535 a9d66c8a14cfec0a307cb74782692995 820 Pfam PF01842 ACT domain 324 376 7.1E-8 T 09-03-2017 IPR002912 ACT domain GO:0008152|GO:0016597 RG43_RS21535 a9d66c8a14cfec0a307cb74782692995 820 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 2.1E-153 T 09-03-2017 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 RG43_RS21535 a9d66c8a14cfec0a307cb74782692995 820 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 09-03-2017 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 RG43_RS21535 a9d66c8a14cfec0a307cb74782692995 820 SUPERFAMILY SSF55347 614 798 3.47E-52 T 09-03-2017 RG43_RS21535 a9d66c8a14cfec0a307cb74782692995 820 Gene3D G3DSA:3.30.360.10 636 792 1.5E-56 T 09-03-2017 RG43_RS21535 a9d66c8a14cfec0a307cb74782692995 820 SUPERFAMILY SSF51735 464 636 1.64E-39 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS21535 a9d66c8a14cfec0a307cb74782692995 820 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 605 2.1E-32 T 09-03-2017 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 RG43_RS21535 a9d66c8a14cfec0a307cb74782692995 820 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 09-03-2017 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 RG43_RS21535 a9d66c8a14cfec0a307cb74782692995 820 Pfam PF13840 ACT domain 393 453 5.5E-9 T 09-03-2017 IPR027795 GATS-like ACT domain RG43_RS21535 a9d66c8a14cfec0a307cb74782692995 820 SUPERFAMILY SSF55021 303 381 1.68E-22 T 09-03-2017 RG43_RS21535 a9d66c8a14cfec0a307cb74782692995 820 Pfam PF00742 Homoserine dehydrogenase 614 811 2.3E-48 T 09-03-2017 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 RG43_RS21535 a9d66c8a14cfec0a307cb74782692995 820 Pfam PF00696 Amino acid kinase family 2 284 6.1E-46 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase RG43_RS21535 a9d66c8a14cfec0a307cb74782692995 820 SUPERFAMILY SSF55021 383 476 3.02E-22 T 09-03-2017 RG43_RS21535 a9d66c8a14cfec0a307cb74782692995 820 PIRSF PIRSF000727 1 818 0.0 T 09-03-2017 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+2.7.2.4+1.1.1.3|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4+1.1.1.3|KEGG: 00300+2.7.2.4+1.1.1.3|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 RG43_RS21050 2a809a270ce014fc86e16db340e31a71 901 SMART SM00958 228 358 5.0E-84 T 09-03-2017 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RG43_RS21050 2a809a270ce014fc86e16db340e31a71 901 SUPERFAMILY SSF52540 416 618 2.3E-58 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS21050 2a809a270ce014fc86e16db340e31a71 901 ProSitePatterns PS01312 SecA family signature. 500 515 - T 09-03-2017 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 RG43_RS21050 2a809a270ce014fc86e16db340e31a71 901 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 817 0.0 T 09-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RG43_RS21050 2a809a270ce014fc86e16db340e31a71 901 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 19.957 T 09-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RG43_RS21050 2a809a270ce014fc86e16db340e31a71 901 SUPERFAMILY SSF81886 620 840 2.35E-85 T 09-03-2017 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RG43_RS21050 2a809a270ce014fc86e16db340e31a71 901 SUPERFAMILY SSF81886 877 889 2.35E-85 T 09-03-2017 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RG43_RS21050 2a809a270ce014fc86e16db340e31a71 901 Pfam PF07517 SecA DEAD-like domain 7 402 9.1E-132 T 09-03-2017 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 RG43_RS21050 2a809a270ce014fc86e16db340e31a71 901 SUPERFAMILY SSF81767 227 368 4.58E-44 T 09-03-2017 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RG43_RS21050 2a809a270ce014fc86e16db340e31a71 901 Gene3D G3DSA:1.10.3060.10 648 831 6.9E-60 T 09-03-2017 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RG43_RS21050 2a809a270ce014fc86e16db340e31a71 901 Gene3D G3DSA:3.90.1440.10 230 368 7.3E-47 T 09-03-2017 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RG43_RS21050 2a809a270ce014fc86e16db340e31a71 901 Pfam PF07516 SecA Wing and Scaffold domain 617 830 7.7E-69 T 09-03-2017 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RG43_RS21050 2a809a270ce014fc86e16db340e31a71 901 Gene3D G3DSA:3.40.50.300 369 416 2.9E-125 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS21050 2a809a270ce014fc86e16db340e31a71 901 Gene3D G3DSA:3.40.50.300 2 228 2.9E-125 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS21050 2a809a270ce014fc86e16db340e31a71 901 Gene3D G3DSA:3.40.50.300 417 619 2.5E-90 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS21050 2a809a270ce014fc86e16db340e31a71 901 Pfam PF02810 SEC-C motif 881 899 9.9E-11 T 09-03-2017 IPR004027 SEC-C motif RG43_RS21050 2a809a270ce014fc86e16db340e31a71 901 SMART SM00957 6 402 0.0 T 09-03-2017 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 RG43_RS21050 2a809a270ce014fc86e16db340e31a71 901 SUPERFAMILY SSF52540 368 415 9.24E-84 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS21050 2a809a270ce014fc86e16db340e31a71 901 SUPERFAMILY SSF52540 5 228 9.24E-84 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS21050 2a809a270ce014fc86e16db340e31a71 901 PRINTS PR00906 SecA protein signature 170 190 7.5E-74 T 09-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RG43_RS21050 2a809a270ce014fc86e16db340e31a71 901 PRINTS PR00906 SecA protein signature 376 393 7.5E-74 T 09-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RG43_RS21050 2a809a270ce014fc86e16db340e31a71 901 PRINTS PR00906 SecA protein signature 63 87 7.5E-74 T 09-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RG43_RS21050 2a809a270ce014fc86e16db340e31a71 901 PRINTS PR00906 SecA protein signature 101 115 7.5E-74 T 09-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RG43_RS21050 2a809a270ce014fc86e16db340e31a71 901 PRINTS PR00906 SecA protein signature 339 361 7.5E-74 T 09-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RG43_RS21050 2a809a270ce014fc86e16db340e31a71 901 PRINTS PR00906 SecA protein signature 413 426 7.5E-74 T 09-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RG43_RS21050 2a809a270ce014fc86e16db340e31a71 901 PRINTS PR00906 SecA protein signature 117 127 7.5E-74 T 09-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RG43_RS21050 2a809a270ce014fc86e16db340e31a71 901 Pfam PF01043 SecA preprotein cross-linking domain 232 358 1.7E-39 T 09-03-2017 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RG43_RS26255 e933f38c54e844615df09466b8372c27 122 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 114 1.8E-27 T 09-03-2017 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 RG43_RS26255 e933f38c54e844615df09466b8372c27 122 TIGRFAM TIGR00526 folB_dom: FolB domain 1 118 5.5E-42 T 09-03-2017 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 RG43_RS26255 e933f38c54e844615df09466b8372c27 122 Gene3D G3DSA:3.30.1130.10 1 115 5.8E-43 T 09-03-2017 RG43_RS26255 e933f38c54e844615df09466b8372c27 122 SUPERFAMILY SSF55620 1 115 4.45E-36 T 09-03-2017 RG43_RS26255 e933f38c54e844615df09466b8372c27 122 SMART SM00905 4 114 5.9E-46 T 09-03-2017 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 RG43_RS26255 e933f38c54e844615df09466b8372c27 122 Pfam PF02152 Dihydroneopterin aldolase 4 113 5.1E-32 T 09-03-2017 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 RG43_RS03880 e933f38c54e844615df09466b8372c27 122 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 114 1.8E-27 T 09-03-2017 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 RG43_RS03880 e933f38c54e844615df09466b8372c27 122 TIGRFAM TIGR00526 folB_dom: FolB domain 1 118 5.5E-42 T 09-03-2017 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 RG43_RS03880 e933f38c54e844615df09466b8372c27 122 Gene3D G3DSA:3.30.1130.10 1 115 5.8E-43 T 09-03-2017 RG43_RS03880 e933f38c54e844615df09466b8372c27 122 SUPERFAMILY SSF55620 1 115 4.45E-36 T 09-03-2017 RG43_RS03880 e933f38c54e844615df09466b8372c27 122 SMART SM00905 4 114 5.9E-46 T 09-03-2017 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 RG43_RS03880 e933f38c54e844615df09466b8372c27 122 Pfam PF02152 Dihydroneopterin aldolase 4 113 5.1E-32 T 09-03-2017 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 RG43_RS14355 fca79e291204297a9c2134d6157ee2b0 337 Hamap MF_00958 Regulator of RpoS [rssB]. 1 337 55.331 T 09-03-2017 IPR028616 Regulator of RpoS RG43_RS14355 fca79e291204297a9c2134d6157ee2b0 337 Pfam PF00072 Response regulator receiver domain 10 120 2.6E-28 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS14355 fca79e291204297a9c2134d6157ee2b0 337 SMART SM00448 8 120 1.3E-28 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS14355 fca79e291204297a9c2134d6157ee2b0 337 Gene3D G3DSA:3.40.50.2300 7 124 1.7E-30 T 09-03-2017 RG43_RS14355 fca79e291204297a9c2134d6157ee2b0 337 SUPERFAMILY SSF52172 8 128 1.04E-31 T 09-03-2017 IPR011006 CheY-like superfamily RG43_RS09875 a40b5110ac2037d550bf06c4116e1537 158 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 107 112 - T 09-03-2017 IPR020891 Uncharacterised protein family UPF0758, conserved site RG43_RS09875 a40b5110ac2037d550bf06c4116e1537 158 SUPERFAMILY SSF102712 83 124 7.06E-5 T 09-03-2017 RG43_RS09875 a40b5110ac2037d550bf06c4116e1537 158 TIGRFAM TIGR00608 radc: DNA repair protein RadC 36 158 4.0E-44 T 09-03-2017 IPR001405 RadC protein RG43_RS09875 a40b5110ac2037d550bf06c4116e1537 158 Pfam PF04002 RadC-like JAB domain 38 157 6.0E-44 T 09-03-2017 IPR025657 RadC-like JAB domain RG43_RS09875 a40b5110ac2037d550bf06c4116e1537 158 Gene3D G3DSA:3.40.140.10 36 158 1.2E-50 T 09-03-2017 RG43_RS05260 96e50296a8bfa1cb8fd9c528e43e236f 957 Pfam PF02347 Glycine cleavage system P-protein 480 739 8.7E-9 T 09-03-2017 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 RG43_RS05260 96e50296a8bfa1cb8fd9c528e43e236f 957 Pfam PF02347 Glycine cleavage system P-protein 16 440 5.3E-194 T 09-03-2017 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 RG43_RS05260 96e50296a8bfa1cb8fd9c528e43e236f 957 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 956 25.714 T 09-03-2017 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 RG43_RS05260 96e50296a8bfa1cb8fd9c528e43e236f 957 SUPERFAMILY SSF53383 929 951 1.17E-100 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS05260 96e50296a8bfa1cb8fd9c528e43e236f 957 SUPERFAMILY SSF53383 480 889 1.17E-100 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS05260 96e50296a8bfa1cb8fd9c528e43e236f 957 Gene3D G3DSA:3.40.640.10 504 779 2.7E-43 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS05260 96e50296a8bfa1cb8fd9c528e43e236f 957 Gene3D G3DSA:3.40.640.10 93 305 4.7E-15 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS05260 96e50296a8bfa1cb8fd9c528e43e236f 957 SUPERFAMILY SSF53383 17 440 4.62E-96 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS05260 96e50296a8bfa1cb8fd9c528e43e236f 957 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 950 0.0 T 09-03-2017 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 RG43_RS19795 8cf1c74966a513c72b197e68eaaaca37 109 Pfam PF05939 Phage minor tail protein 2 108 1.6E-36 T 09-03-2017 IPR010265 Bacteriophage lambda, GpM, minor tail RG43_RS09750 7fcda95614d302e2c5fa1cf79e8e4f30 196 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 2 196 33.359 T 09-03-2017 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 RG43_RS09750 7fcda95614d302e2c5fa1cf79e8e4f30 196 SUPERFAMILY SSF52317 3 195 1.45E-53 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like RG43_RS09750 7fcda95614d302e2c5fa1cf79e8e4f30 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 72 83 9.7E-5 T 09-03-2017 RG43_RS09750 7fcda95614d302e2c5fa1cf79e8e4f30 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 174 187 9.7E-5 T 09-03-2017 RG43_RS09750 7fcda95614d302e2c5fa1cf79e8e4f30 196 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 3 196 1.3E-74 T 09-03-2017 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 RG43_RS09750 7fcda95614d302e2c5fa1cf79e8e4f30 196 PIRSF PIRSF000495 1 196 2.1E-62 T 09-03-2017 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 RG43_RS09750 7fcda95614d302e2c5fa1cf79e8e4f30 196 Pfam PF00117 Glutamine amidotransferase class-I 7 194 1.9E-17 T 09-03-2017 IPR017926 Glutamine amidotransferase RG43_RS09750 7fcda95614d302e2c5fa1cf79e8e4f30 196 Gene3D G3DSA:3.40.50.880 1 196 1.2E-70 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like RG43_RS00990 929a6d73387e9e8dfdcef3f83ce89ae4 146 SUPERFAMILY SSF55729 1 141 9.75E-25 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS00990 929a6d73387e9e8dfdcef3f83ce89ae4 146 Gene3D G3DSA:3.40.630.30 1 142 2.8E-25 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS00990 929a6d73387e9e8dfdcef3f83ce89ae4 146 Pfam PF13673 Acetyltransferase (GNAT) domain 47 124 2.2E-15 T 09-03-2017 IPR000182 GNAT domain GO:0008080 RG43_RS23050 0926ee0a72c49557326548af04ca2d32 111 Pfam PF03831 PhnA domain 44 111 5.2E-35 T 09-03-2017 IPR013988 PhnA protein, C-terminal RG43_RS23050 0926ee0a72c49557326548af04ca2d32 111 SUPERFAMILY SSF82057 39 110 7.78E-30 T 09-03-2017 RG43_RS23050 0926ee0a72c49557326548af04ca2d32 111 Gene3D G3DSA:2.20.25.10 1 40 9.8E-21 T 09-03-2017 RG43_RS23050 0926ee0a72c49557326548af04ca2d32 111 Pfam PF08274 PhnA Zinc-Ribbon 2 30 8.1E-16 T 09-03-2017 IPR013987 PhnA protein, N-terminal RG43_RS23050 0926ee0a72c49557326548af04ca2d32 111 Gene3D G3DSA:2.30.30.40 42 110 3.7E-39 T 09-03-2017 RG43_RS23050 0926ee0a72c49557326548af04ca2d32 111 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 2 111 1.7E-63 T 09-03-2017 IPR004624 PhnA protein RG43_RS23050 0926ee0a72c49557326548af04ca2d32 111 SUPERFAMILY SSF57783 1 36 3.91E-14 T 09-03-2017 RG43_RS22250 3b4798139750e07d544a7cf29d8b335c 153 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 152 1.7E-73 T 09-03-2017 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 RG43_RS22250 3b4798139750e07d544a7cf29d8b335c 153 SUPERFAMILY SSF57825 101 151 1.7E-15 T 09-03-2017 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal RG43_RS22250 3b4798139750e07d544a7cf29d8b335c 153 SUPERFAMILY SSF54893 2 100 8.24E-36 T 09-03-2017 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal RG43_RS22250 3b4798139750e07d544a7cf29d8b335c 153 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 32.847 T 09-03-2017 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 RG43_RS22250 3b4798139750e07d544a7cf29d8b335c 153 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 9.0E-48 T 09-03-2017 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal RG43_RS22250 3b4798139750e07d544a7cf29d8b335c 153 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 149 1.2E-18 T 09-03-2017 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal RG43_RS22250 3b4798139750e07d544a7cf29d8b335c 153 Gene3D G3DSA:2.30.30.20 101 152 7.0E-24 T 09-03-2017 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal RG43_RS22250 3b4798139750e07d544a7cf29d8b335c 153 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 96 1.1E-30 T 09-03-2017 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal RG43_RS22250 3b4798139750e07d544a7cf29d8b335c 153 Gene3D G3DSA:3.30.70.140 2 98 6.4E-38 T 09-03-2017 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal RG43_RS05380 701c7132ae776ceec8f783445087f95a 259 SUPERFAMILY SSF55447 164 252 4.45E-13 T 09-03-2017 IPR005107 CO dehydrogenase flavoprotein, C-terminal RG43_RS05380 701c7132ae776ceec8f783445087f95a 259 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 167 248 1.3E-4 T 09-03-2017 IPR005107 CO dehydrogenase flavoprotein, C-terminal RG43_RS05380 701c7132ae776ceec8f783445087f95a 259 Gene3D G3DSA:3.30.465.10 53 138 1.7E-12 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RG43_RS05380 701c7132ae776ceec8f783445087f95a 259 SUPERFAMILY SSF56176 4 154 8.18E-24 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RG43_RS05380 701c7132ae776ceec8f783445087f95a 259 TIGRFAM TIGR03312 Se_sel_red_FAD: probable selenate reductase, FAD-binding subunit 2 258 1.1E-147 T 09-03-2017 IPR017698 Probable selenate reductase, FAD-binding subunit RG43_RS05380 701c7132ae776ceec8f783445087f95a 259 Gene3D G3DSA:3.30.390.50 165 252 4.9E-12 T 09-03-2017 RG43_RS05380 701c7132ae776ceec8f783445087f95a 259 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 4 146 1.3E-19 T 09-03-2017 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 RG43_RS05380 701c7132ae776ceec8f783445087f95a 259 SMART SM01092 161 251 6.9E-11 T 09-03-2017 IPR005107 CO dehydrogenase flavoprotein, C-terminal RG43_RS00580 2376381fa45e048361d9d977b10bcbfd 265 SUPERFAMILY SSF56112 58 207 3.09E-8 T 09-03-2017 IPR011009 Protein kinase-like domain RG43_RS00580 2376381fa45e048361d9d977b10bcbfd 265 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 20 230 6.5E-72 T 09-03-2017 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 Reactome: R-HSA-6782315|Reactome: R-HSA-6804756 RG43_RS00580 2376381fa45e048361d9d977b10bcbfd 265 PIRSF PIRSF037318 1 265 6.0E-159 T 09-03-2017 IPR017172 Lipopolysaccharide core heptose(I) kinase rfaP GO:0009103|GO:0016301 RG43_RS17580 14b8c4d6aa992bcc07e76e8c08a92c5a 1438 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1360 1437 7.1E-29 T 09-03-2017 IPR022385 Rhs repeat-associated core GO:0097264 RG43_RS17580 14b8c4d6aa992bcc07e76e8c08a92c5a 1438 PRINTS PR00394 RHS protein signature 1382 1402 2.7E-13 T 09-03-2017 IPR001826 RHS protein RG43_RS17580 14b8c4d6aa992bcc07e76e8c08a92c5a 1438 PRINTS PR00394 RHS protein signature 1358 1373 2.7E-13 T 09-03-2017 IPR001826 RHS protein RG43_RS17580 14b8c4d6aa992bcc07e76e8c08a92c5a 1438 PRINTS PR00394 RHS protein signature 1405 1424 2.7E-13 T 09-03-2017 IPR001826 RHS protein RG43_RS17580 14b8c4d6aa992bcc07e76e8c08a92c5a 1438 SUPERFAMILY SSF82171 784 941 1.29E-7 T 09-03-2017 RG43_RS17580 14b8c4d6aa992bcc07e76e8c08a92c5a 1438 SUPERFAMILY SSF82171 629 749 1.29E-7 T 09-03-2017 RG43_RS17580 14b8c4d6aa992bcc07e76e8c08a92c5a 1438 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 832 872 4.9E-8 T 09-03-2017 IPR006530 YD repeat RG43_RS17580 14b8c4d6aa992bcc07e76e8c08a92c5a 1438 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 683 724 4.3E-6 T 09-03-2017 IPR006530 YD repeat RG43_RS17580 14b8c4d6aa992bcc07e76e8c08a92c5a 1438 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 811 851 1.9E-6 T 09-03-2017 IPR006530 YD repeat RG43_RS17580 14b8c4d6aa992bcc07e76e8c08a92c5a 1438 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 769 806 6.4E-9 T 09-03-2017 IPR006530 YD repeat RG43_RS17580 14b8c4d6aa992bcc07e76e8c08a92c5a 1438 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 916 956 1.0E-4 T 09-03-2017 IPR006530 YD repeat RG43_RS17580 14b8c4d6aa992bcc07e76e8c08a92c5a 1438 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 875 914 3.0E-9 T 09-03-2017 IPR006530 YD repeat RG43_RS17580 14b8c4d6aa992bcc07e76e8c08a92c5a 1438 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 642 680 9.3E-6 T 09-03-2017 IPR006530 YD repeat RG43_RS17580 14b8c4d6aa992bcc07e76e8c08a92c5a 1438 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1032 1070 5.7E-5 T 09-03-2017 IPR006530 YD repeat RG43_RS17580 14b8c4d6aa992bcc07e76e8c08a92c5a 1438 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 709 744 9.5E-6 T 09-03-2017 IPR006530 YD repeat RG43_RS17580 14b8c4d6aa992bcc07e76e8c08a92c5a 1438 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 984 1016 0.0011 T 09-03-2017 IPR006530 YD repeat RG43_RS17580 14b8c4d6aa992bcc07e76e8c08a92c5a 1438 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1244 1273 9.8E-7 T 09-03-2017 IPR006530 YD repeat RG43_RS17580 14b8c4d6aa992bcc07e76e8c08a92c5a 1438 Pfam PF05593 RHS Repeat 832 869 1.4E-7 T 09-03-2017 IPR031325 RHS repeat RG43_RS17580 14b8c4d6aa992bcc07e76e8c08a92c5a 1438 Pfam PF05593 RHS Repeat 875 910 2.7E-7 T 09-03-2017 IPR031325 RHS repeat RG43_RS17580 14b8c4d6aa992bcc07e76e8c08a92c5a 1438 Pfam PF05593 RHS Repeat 1032 1068 2.6E-5 T 09-03-2017 IPR031325 RHS repeat RG43_RS17580 14b8c4d6aa992bcc07e76e8c08a92c5a 1438 Pfam PF05593 RHS Repeat 811 845 7.6E-6 T 09-03-2017 IPR031325 RHS repeat RG43_RS17580 14b8c4d6aa992bcc07e76e8c08a92c5a 1438 Pfam PF05593 RHS Repeat 711 742 6.7E-6 T 09-03-2017 IPR031325 RHS repeat RG43_RS17580 14b8c4d6aa992bcc07e76e8c08a92c5a 1438 Pfam PF05593 RHS Repeat 769 804 1.3E-9 T 09-03-2017 IPR031325 RHS repeat RG43_RS17580 14b8c4d6aa992bcc07e76e8c08a92c5a 1438 Pfam PF05593 RHS Repeat 896 931 5.3E-9 T 09-03-2017 IPR031325 RHS repeat RG43_RS17580 14b8c4d6aa992bcc07e76e8c08a92c5a 1438 Pfam PF05593 RHS Repeat 1224 1259 1.2E-6 T 09-03-2017 IPR031325 RHS repeat RG43_RS17580 14b8c4d6aa992bcc07e76e8c08a92c5a 1438 Pfam PF03527 RHS protein 1333 1369 4.0E-16 T 09-03-2017 IPR001826 RHS protein RG43_RS12715 fec3be7112964a5ddcc1c4cddcf297b3 406 Gene3D G3DSA:3.30.420.40 83 223 9.2E-33 T 09-03-2017 RG43_RS12715 fec3be7112964a5ddcc1c4cddcf297b3 406 SUPERFAMILY SSF46785 12 77 1.18E-15 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS12715 fec3be7112964a5ddcc1c4cddcf297b3 406 Gene3D G3DSA:1.10.10.10 12 80 6.8E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS12715 fec3be7112964a5ddcc1c4cddcf297b3 406 SUPERFAMILY SSF53067 87 391 2.09E-45 T 09-03-2017 RG43_RS12715 fec3be7112964a5ddcc1c4cddcf297b3 406 Pfam PF00480 ROK family 90 389 2.0E-52 T 09-03-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 RG43_RS12715 fec3be7112964a5ddcc1c4cddcf297b3 406 Gene3D G3DSA:3.30.420.40 224 375 1.7E-43 T 09-03-2017 RG43_RS02415 1a6377b3ef5b5fc6796affa39279224a 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 09-03-2017 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02415 1a6377b3ef5b5fc6796affa39279224a 179 SUPERFAMILY SSF55282 4 179 2.35E-79 T 09-03-2017 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02415 1a6377b3ef5b5fc6796affa39279224a 179 Gene3D G3DSA:3.30.1440.10 2 179 7.2E-81 T 09-03-2017 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02415 1a6377b3ef5b5fc6796affa39279224a 179 PIRSF PIRSF002161 1 179 1.5E-66 T 09-03-2017 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02415 1a6377b3ef5b5fc6796affa39279224a 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 5.0E-41 T 09-03-2017 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02415 1a6377b3ef5b5fc6796affa39279224a 179 Pfam PF00281 Ribosomal protein L5 24 80 9.4E-29 T 09-03-2017 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02415 1a6377b3ef5b5fc6796affa39279224a 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.826 T 09-03-2017 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS07620 46d7b4e7c14cfe6fcde0a62b67c19768 365 Gene3D G3DSA:3.40.50.300 3 244 7.1E-83 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS07620 46d7b4e7c14cfe6fcde0a62b67c19768 365 SUPERFAMILY SSF50331 239 345 1.19E-13 T 09-03-2017 IPR008995 Molybdate/tungstate binding, C-terminal RG43_RS07620 46d7b4e7c14cfe6fcde0a62b67c19768 365 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 243 4.9E-129 T 09-03-2017 IPR005666 Sulphate transport system permease protein 1 GO:0006810|GO:0016020|GO:0042626 KEGG: 00920+3.6.3.25 RG43_RS07620 46d7b4e7c14cfe6fcde0a62b67c19768 365 Pfam PF12857 TOBE-like domain 289 339 1.4E-6 T 09-03-2017 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 RG43_RS07620 46d7b4e7c14cfe6fcde0a62b67c19768 365 SMART SM00382 27 214 3.2E-18 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS07620 46d7b4e7c14cfe6fcde0a62b67c19768 365 SUPERFAMILY SSF52540 3 244 9.13E-86 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS07620 46d7b4e7c14cfe6fcde0a62b67c19768 365 Pfam PF00005 ABC transporter 18 164 4.8E-38 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS07620 46d7b4e7c14cfe6fcde0a62b67c19768 365 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS22915 8c7ada051fc108df69b815b144343051 505 Gene3D G3DSA:3.30.930.10 157 500 1.2E-123 T 09-03-2017 RG43_RS22915 8c7ada051fc108df69b815b144343051 505 SUPERFAMILY SSF55681 162 502 2.87E-123 T 09-03-2017 RG43_RS22915 8c7ada051fc108df69b815b144343051 505 Pfam PF00152 tRNA synthetases class II (D, K and N) 162 501 6.4E-84 T 09-03-2017 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS22915 8c7ada051fc108df69b815b144343051 505 Gene3D G3DSA:2.40.50.140 16 154 1.8E-49 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS22915 8c7ada051fc108df69b815b144343051 505 SUPERFAMILY SSF50249 13 155 9.3E-48 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS22915 8c7ada051fc108df69b815b144343051 505 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 21 505 45.612 T 09-03-2017 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RG43_RS22915 8c7ada051fc108df69b815b144343051 505 PIRSF PIRSF039101 1 505 1.8E-209 T 09-03-2017 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RG43_RS22915 8c7ada051fc108df69b815b144343051 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 199 209 1.5E-39 T 09-03-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RG43_RS22915 8c7ada051fc108df69b815b144343051 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 262 279 1.5E-39 T 09-03-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RG43_RS22915 8c7ada051fc108df69b815b144343051 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 215 231 1.5E-39 T 09-03-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RG43_RS22915 8c7ada051fc108df69b815b144343051 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 244 257 1.5E-39 T 09-03-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RG43_RS22915 8c7ada051fc108df69b815b144343051 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 386 402 1.5E-39 T 09-03-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RG43_RS22915 8c7ada051fc108df69b815b144343051 505 Pfam PF01336 OB-fold nucleic acid binding domain 68 146 1.4E-15 T 09-03-2017 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 RG43_RS22915 8c7ada051fc108df69b815b144343051 505 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 15 504 7.3E-241 T 09-03-2017 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RG43_RS03570 a66343ae1ae0ed0862055ecd995a3a4f 149 SUPERFAMILY SSF51197 3 142 2.28E-22 T 09-03-2017 RG43_RS03570 a66343ae1ae0ed0862055ecd995a3a4f 149 Pfam PF04074 Domain of unknown function (DUF386) 3 139 3.1E-24 T 09-03-2017 IPR004375 YhcH/YjgK/YiaL family RG43_RS03570 a66343ae1ae0ed0862055ecd995a3a4f 149 Gene3D G3DSA:2.60.120.370 3 141 6.3E-17 T 09-03-2017 IPR004375 YhcH/YjgK/YiaL family RG43_RS07905 5a43f19471dbaf2efebb2dc53849652a 1197 SUPERFAMILY SSF53850 62 278 4.73E-23 T 09-03-2017 RG43_RS07905 5a43f19471dbaf2efebb2dc53849652a 1197 Pfam PF00072 Response regulator receiver domain 961 1070 1.3E-29 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS07905 5a43f19471dbaf2efebb2dc53849652a 1197 Gene3D G3DSA:3.30.565.10 779 940 7.9E-42 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS07905 5a43f19471dbaf2efebb2dc53849652a 1197 SMART SM00388 711 777 6.8E-20 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS07905 5a43f19471dbaf2efebb2dc53849652a 1197 Pfam PF00512 His Kinase A (phospho-acceptor) domain 711 777 1.1E-14 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS07905 5a43f19471dbaf2efebb2dc53849652a 1197 SUPERFAMILY SSF52172 957 1086 5.98E-36 T 09-03-2017 IPR011006 CheY-like superfamily RG43_RS07905 5a43f19471dbaf2efebb2dc53849652a 1197 Gene3D G3DSA:1.10.287.130 711 772 1.3E-12 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS07905 5a43f19471dbaf2efebb2dc53849652a 1197 SMART SM00448 959 1070 2.5E-34 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS07905 5a43f19471dbaf2efebb2dc53849652a 1197 SUPERFAMILY SSF53850 304 521 7.31E-31 T 09-03-2017 RG43_RS07905 5a43f19471dbaf2efebb2dc53849652a 1197 Gene3D G3DSA:3.40.190.10 54 186 5.6E-11 T 09-03-2017 RG43_RS07905 5a43f19471dbaf2efebb2dc53849652a 1197 Gene3D G3DSA:1.20.120.160 1063 1193 2.7E-11 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RG43_RS07905 5a43f19471dbaf2efebb2dc53849652a 1197 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 74 276 8.9E-13 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RG43_RS07905 5a43f19471dbaf2efebb2dc53849652a 1197 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 306 520 9.1E-24 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RG43_RS07905 5a43f19471dbaf2efebb2dc53849652a 1197 Gene3D G3DSA:3.40.50.2300 957 1062 1.2E-36 T 09-03-2017 RG43_RS07905 5a43f19471dbaf2efebb2dc53849652a 1197 SMART SM00073 1094 1193 5.5E-18 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RG43_RS07905 5a43f19471dbaf2efebb2dc53849652a 1197 SMART SM00387 824 938 5.6E-32 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS07905 5a43f19471dbaf2efebb2dc53849652a 1197 SMART SM00062 303 522 5.2E-44 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RG43_RS07905 5a43f19471dbaf2efebb2dc53849652a 1197 SMART SM00062 57 279 7.6E-4 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RG43_RS07905 5a43f19471dbaf2efebb2dc53849652a 1197 SUPERFAMILY SSF47384 694 778 2.16E-16 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS07905 5a43f19471dbaf2efebb2dc53849652a 1197 Gene3D G3DSA:3.40.190.10 300 380 4.5E-13 T 09-03-2017 RG43_RS07905 5a43f19471dbaf2efebb2dc53849652a 1197 Gene3D G3DSA:3.40.190.10 482 520 4.5E-13 T 09-03-2017 RG43_RS07905 5a43f19471dbaf2efebb2dc53849652a 1197 PRINTS PR00344 Bacterial sensor protein C-terminal signature 865 879 6.1E-13 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS07905 5a43f19471dbaf2efebb2dc53849652a 1197 PRINTS PR00344 Bacterial sensor protein C-terminal signature 898 916 6.1E-13 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS07905 5a43f19471dbaf2efebb2dc53849652a 1197 PRINTS PR00344 Bacterial sensor protein C-terminal signature 922 935 6.1E-13 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS07905 5a43f19471dbaf2efebb2dc53849652a 1197 PRINTS PR00344 Bacterial sensor protein C-terminal signature 883 893 6.1E-13 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS07905 5a43f19471dbaf2efebb2dc53849652a 1197 SUPERFAMILY SSF47226 1053 1182 4.32E-15 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RG43_RS07905 5a43f19471dbaf2efebb2dc53849652a 1197 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 825 937 1.7E-23 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS07905 5a43f19471dbaf2efebb2dc53849652a 1197 SUPERFAMILY SSF55874 767 939 1.57E-39 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS07905 5a43f19471dbaf2efebb2dc53849652a 1197 Gene3D G3DSA:3.40.190.10 381 463 4.6E-4 T 09-03-2017 RG43_RS05770 0cc55ff923e862429efd22af0603e31d 365 SUPERFAMILY SSF50685 25 353 1.46E-116 T 09-03-2017 IPR009009 RlpA-like protein, double-psi beta-barrel domain RG43_RS05770 0cc55ff923e862429efd22af0603e31d 365 SMART SM00925 125 257 2.4E-70 T 09-03-2017 IPR005300 Lytic transglycosylase MltA GO:0004553 RG43_RS05770 0cc55ff923e862429efd22af0603e31d 365 Pfam PF06725 3D domain 277 354 3.5E-25 T 09-03-2017 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 RG43_RS05770 0cc55ff923e862429efd22af0603e31d 365 Gene3D G3DSA:2.40.40.10 76 163 1.9E-14 T 09-03-2017 IPR009009 RlpA-like protein, double-psi beta-barrel domain RG43_RS05770 0cc55ff923e862429efd22af0603e31d 365 Gene3D G3DSA:2.40.40.10 166 353 4.0E-47 T 09-03-2017 IPR009009 RlpA-like protein, double-psi beta-barrel domain RG43_RS05770 0cc55ff923e862429efd22af0603e31d 365 Pfam PF03562 MltA specific insert domain 87 257 5.1E-41 T 09-03-2017 IPR005300 Lytic transglycosylase MltA GO:0004553 RG43_RS25775 be8bc58f9fbb9d8a6a06237f7c038a4c 394 Pfam PF07690 Major Facilitator Superfamily 14 349 2.1E-39 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS25775 be8bc58f9fbb9d8a6a06237f7c038a4c 394 Gene3D G3DSA:1.20.1250.20 234 384 5.3E-4 T 09-03-2017 RG43_RS25775 be8bc58f9fbb9d8a6a06237f7c038a4c 394 Gene3D G3DSA:1.20.1250.20 4 187 3.1E-30 T 09-03-2017 RG43_RS25775 be8bc58f9fbb9d8a6a06237f7c038a4c 394 TIGRFAM TIGR00880 2_A_01_02: multidrug resistance protein 50 186 2.8E-40 T 09-03-2017 IPR004734 Multidrug resistance protein GO:0015238|GO:0015893|GO:0016021 Reactome: R-HSA-442660 RG43_RS25775 be8bc58f9fbb9d8a6a06237f7c038a4c 394 SUPERFAMILY SSF103473 4 388 3.27E-56 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS01810 63e1eaf319be5966e65f1807faa39795 108 SMART SM00450 7 102 1.1E-19 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS01810 63e1eaf319be5966e65f1807faa39795 108 SUPERFAMILY SSF52821 1 100 5.24E-27 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS01810 63e1eaf319be5966e65f1807faa39795 108 Pfam PF00581 Rhodanese-like domain 11 98 5.5E-13 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS01810 63e1eaf319be5966e65f1807faa39795 108 Gene3D G3DSA:3.40.250.10 2 101 3.3E-29 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS01810 63e1eaf319be5966e65f1807faa39795 108 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 106 33.236 T 09-03-2017 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 RG43_RS14625 e07dd1832c09e47bd7384060bb2f84af 304 SUPERFAMILY SSF52317 5 160 1.69E-32 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like RG43_RS14625 e07dd1832c09e47bd7384060bb2f84af 304 SUPERFAMILY SSF141986 139 289 6.15E-43 T 09-03-2017 IPR027461 LD-carboxypeptidase A, C-terminal domain RG43_RS14625 e07dd1832c09e47bd7384060bb2f84af 304 Gene3D G3DSA:3.40.50.10740 5 160 5.7E-40 T 09-03-2017 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain RG43_RS14625 e07dd1832c09e47bd7384060bb2f84af 304 Gene3D G3DSA:3.50.30.60 167 292 2.0E-43 T 09-03-2017 IPR027461 LD-carboxypeptidase A, C-terminal domain RG43_RS14625 e07dd1832c09e47bd7384060bb2f84af 304 Pfam PF02016 LD-carboxypeptidase 6 284 1.1E-64 T 09-03-2017 IPR003507 Peptidase family S66 RG43_RS14625 e07dd1832c09e47bd7384060bb2f84af 304 PIRSF PIRSF028757 1 300 7.9E-90 T 09-03-2017 IPR003507 Peptidase family S66 RG43_RS23690 a4f3e32edffa7958dc01944ed07694eb 231 PIRSF PIRSF006993 1 231 3.1E-117 T 09-03-2017 IPR016500 Uncharacterised conserved protein UCP006993 RG43_RS23690 a4f3e32edffa7958dc01944ed07694eb 231 Pfam PF07356 Protein of unknown function (DUF1481) 42 227 5.8E-69 T 09-03-2017 IPR010858 Protein of unknown function DUF1481 RG43_RS23690 a4f3e32edffa7958dc01944ed07694eb 231 Pfam PF08139 Prokaryotic membrane lipoprotein lipid attachment site 6 33 9.8E-9 T 09-03-2017 IPR012640 Membrane lipoprotein, lipid attachment site RG43_RS12395 eb054aa220e7391b7116f1e08101ae67 135 SUPERFAMILY SSF54593 1 130 2.69E-34 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RG43_RS12395 eb054aa220e7391b7116f1e08101ae67 135 Gene3D G3DSA:3.10.180.10 1 127 3.4E-48 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RG43_RS12395 eb054aa220e7391b7116f1e08101ae67 135 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 134 1.9E-69 T 09-03-2017 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 RG43_RS12395 eb054aa220e7391b7116f1e08101ae67 135 ProSitePatterns PS00935 Glyoxalase I signature 2. 69 81 - T 09-03-2017 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 RG43_RS12395 eb054aa220e7391b7116f1e08101ae67 135 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 09-03-2017 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 RG43_RS12395 eb054aa220e7391b7116f1e08101ae67 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 4.6E-25 T 09-03-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RG43_RS14270 713da29943a8b25c8d21c95d1b4bad92 191 Gene3D G3DSA:3.40.50.1390 3 130 1.8E-33 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RG43_RS14270 713da29943a8b25c8d21c95d1b4bad92 191 Pfam PF00239 Resolvase, N terminal domain 5 145 2.2E-37 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RG43_RS14270 713da29943a8b25c8d21c95d1b4bad92 191 SMART SM00857 4 146 1.2E-48 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RG43_RS14270 713da29943a8b25c8d21c95d1b4bad92 191 ProSitePatterns PS00398 Site-specific recombinases signature 2. 64 76 - T 09-03-2017 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 RG43_RS14270 713da29943a8b25c8d21c95d1b4bad92 191 SUPERFAMILY SSF53041 3 146 1.57E-37 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RG43_RS14270 713da29943a8b25c8d21c95d1b4bad92 191 Gene3D G3DSA:1.10.10.10 158 188 4.6E-5 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS25520 58d1f6f34e10bbe73f8ab97168dab8a2 296 SUPERFAMILY SSF161098 35 286 1.09E-32 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS25520 58d1f6f34e10bbe73f8ab97168dab8a2 296 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 28 293 5.1E-86 T 09-03-2017 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 RG43_RS25520 58d1f6f34e10bbe73f8ab97168dab8a2 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 289 8.2E-31 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS25520 58d1f6f34e10bbe73f8ab97168dab8a2 296 Gene3D G3DSA:1.10.3720.10 27 295 2.7E-38 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS01185 96e293bdedff5b94b855e14379e8f3eb 498 Pfam PF00675 Insulinase (Peptidase family M16) 46 164 6.6E-6 T 09-03-2017 IPR011765 Peptidase M16, N-terminal RG43_RS01185 96e293bdedff5b94b855e14379e8f3eb 498 SUPERFAMILY SSF63411 322 457 4.54E-6 T 09-03-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RG43_RS01185 96e293bdedff5b94b855e14379e8f3eb 498 Gene3D G3DSA:3.30.830.10 25 252 7.6E-22 T 09-03-2017 IPR011237 Peptidase M16 domain GO:0046872 RG43_RS01185 96e293bdedff5b94b855e14379e8f3eb 498 Pfam PF05193 Peptidase M16 inactive domain 201 377 1.9E-18 T 09-03-2017 IPR007863 Peptidase M16, C-terminal RG43_RS01185 96e293bdedff5b94b855e14379e8f3eb 498 SUPERFAMILY SSF63411 29 239 7.16E-24 T 09-03-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RG43_RS25820 fa302c5c12490cc67722ea3b18ccdee8 500 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 412 497 1.8E-6 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS25820 fa302c5c12490cc67722ea3b18ccdee8 500 Gene3D G3DSA:3.30.565.10 373 496 1.4E-8 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS25820 fa302c5c12490cc67722ea3b18ccdee8 500 SMART SM00387 409 499 7.0E-12 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS25820 fa302c5c12490cc67722ea3b18ccdee8 500 Pfam PF05231 MASE1 12 276 9.7E-15 T 09-03-2017 IPR007895 MASE1 RG43_RS25820 fa302c5c12490cc67722ea3b18ccdee8 500 SUPERFAMILY SSF55874 385 496 2.19E-17 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS25820 fa302c5c12490cc67722ea3b18ccdee8 500 Pfam PF07730 Histidine kinase 305 370 1.4E-14 T 09-03-2017 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 RG43_RS16100 28d23a316b4318eda4ed08bc4d0adf2c 208 Pfam PF00857 Isochorismatase family 14 165 1.5E-21 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RG43_RS16100 28d23a316b4318eda4ed08bc4d0adf2c 208 Gene3D G3DSA:3.40.50.850 3 205 8.0E-49 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RG43_RS16100 28d23a316b4318eda4ed08bc4d0adf2c 208 SUPERFAMILY SSF52499 3 202 5.76E-54 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RG43_RS03150 738762645b11c78b816619aae03182ea 294 Pfam PF07719 Tetratricopeptide repeat 96 129 5.2E-5 T 09-03-2017 IPR013105 Tetratricopeptide repeat 2 RG43_RS03150 738762645b11c78b816619aae03182ea 294 Gene3D G3DSA:1.25.40.10 49 267 3.3E-32 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS03150 738762645b11c78b816619aae03182ea 294 SMART SM00028 62 95 0.0033 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 RG43_RS03150 738762645b11c78b816619aae03182ea 294 SMART SM00028 96 129 2.0E-4 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 RG43_RS03150 738762645b11c78b816619aae03182ea 294 SMART SM00028 234 267 17.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 RG43_RS03150 738762645b11c78b816619aae03182ea 294 SUPERFAMILY SSF48452 27 283 1.57E-78 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS03150 738762645b11c78b816619aae03182ea 294 PIRSF PIRSF004654 1 292 1.6E-122 T 09-03-2017 IPR023605 Lipoprotein NlpI RG43_RS03150 738762645b11c78b816619aae03182ea 294 Pfam PF13181 Tetratricopeptide repeat 62 94 0.022 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 RG43_RS02650 cabaf7ec06216e392ef38a840c04a76e 220 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 84 202 2.5E-48 T 09-03-2017 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 RG43_RS02650 cabaf7ec06216e392ef38a840c04a76e 220 SUPERFAMILY SSF46689 2 65 1.95E-17 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS02650 cabaf7ec06216e392ef38a840c04a76e 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 2.8E-8 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RG43_RS02650 cabaf7ec06216e392ef38a840c04a76e 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 2.8E-8 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RG43_RS02650 cabaf7ec06216e392ef38a840c04a76e 220 SUPERFAMILY SSF48498 84 202 3.95E-17 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RG43_RS02650 cabaf7ec06216e392ef38a840c04a76e 220 Gene3D G3DSA:1.10.357.10 59 205 1.6E-19 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RG43_RS02650 cabaf7ec06216e392ef38a840c04a76e 220 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 6.4E-18 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RG43_RS02650 cabaf7ec06216e392ef38a840c04a76e 220 Gene3D G3DSA:1.10.10.60 2 58 3.9E-20 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS02650 cabaf7ec06216e392ef38a840c04a76e 220 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 09-03-2017 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RG43_RS17375 d3e359441fbb6d15ad5d4ade4c910750 388 SUPERFAMILY SSF52210 239 385 9.81E-53 T 09-03-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 RG43_RS17375 d3e359441fbb6d15ad5d4ade4c910750 388 Gene3D G3DSA:3.30.1490.20 22 95 2.0E-35 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RG43_RS17375 d3e359441fbb6d15ad5d4ade4c910750 388 Gene3D G3DSA:3.30.470.20 96 239 4.7E-57 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RG43_RS17375 d3e359441fbb6d15ad5d4ade4c910750 388 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.133 T 09-03-2017 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 RG43_RS17375 d3e359441fbb6d15ad5d4ade4c910750 388 SUPERFAMILY SSF56059 1 238 2.65E-81 T 09-03-2017 RG43_RS17375 d3e359441fbb6d15ad5d4ade4c910750 388 PIRSF PIRSF001554 1 388 6.3E-154 T 09-03-2017 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 RG43_RS17375 d3e359441fbb6d15ad5d4ade4c910750 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 09-03-2017 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 RG43_RS17375 d3e359441fbb6d15ad5d4ade4c910750 388 Pfam PF08442 ATP-grasp domain 2 203 5.4E-83 T 09-03-2017 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 RG43_RS17375 d3e359441fbb6d15ad5d4ade4c910750 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 1.9E-183 T 09-03-2017 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 RG43_RS17375 d3e359441fbb6d15ad5d4ade4c910750 388 Pfam PF00549 CoA-ligase 262 382 2.1E-24 T 09-03-2017 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 RG43_RS17375 d3e359441fbb6d15ad5d4ade4c910750 388 Gene3D G3DSA:3.40.50.261 240 383 3.4E-64 T 09-03-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 RG43_RS03395 293b5c53602437621a251e64fc6ac435 454 Pfam PF03313 Serine dehydratase alpha chain 184 448 3.4E-99 T 09-03-2017 IPR005130 Serine dehydratase-like, alpha subunit RG43_RS03395 293b5c53602437621a251e64fc6ac435 454 Pfam PF03315 Serine dehydratase beta chain 3 155 5.1E-54 T 09-03-2017 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 RG43_RS03395 293b5c53602437621a251e64fc6ac435 454 SUPERFAMILY SSF143548 16 158 2.09E-43 T 09-03-2017 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 RG43_RS03395 293b5c53602437621a251e64fc6ac435 454 Gene3D G3DSA:3.30.1330.90 10 157 4.5E-52 T 09-03-2017 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 RG43_RS03395 293b5c53602437621a251e64fc6ac435 454 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 8.1E-218 T 09-03-2017 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 RG43_RS00235 ecfd6cb057ff6a52833d72b2753656cd 74 SUPERFAMILY SSF88659 5 52 5.56E-9 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS00235 ecfd6cb057ff6a52833d72b2753656cd 74 Pfam PF08281 Sigma-70, region 4 7 53 2.3E-8 T 09-03-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS00235 ecfd6cb057ff6a52833d72b2753656cd 74 Gene3D G3DSA:1.10.10.10 4 53 5.5E-8 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS24295 00f868f6f7afe3c20a1aaf7a5eab49fa 141 TIGRFAM TIGR03495 phage_LysB: phage lysis regulatory protein, LysB family 7 140 2.3E-51 T 09-03-2017 IPR020000 Bacteriophage P2, LysB RG43_RS07575 fba85d05d695ab68cf36684c692a2b64 299 SUPERFAMILY SSF54909 1 296 1.45E-90 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel RG43_RS07575 fba85d05d695ab68cf36684c692a2b64 299 Pfam PF04261 Dyp-type peroxidase family 5 295 3.3E-98 T 09-03-2017 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 RG43_RS07575 fba85d05d695ab68cf36684c692a2b64 299 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 296 1.5E-90 T 09-03-2017 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 RG43_RS08800 c75bff5d958d3809695d48d596226a11 159 SUPERFAMILY SSF82093 30 143 4.45E-41 T 09-03-2017 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 RG43_RS08800 c75bff5d958d3809695d48d596226a11 159 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 147 31.978 T 09-03-2017 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 RG43_RS08800 c75bff5d958d3809695d48d596226a11 159 Pfam PF03100 CcmE 4 137 5.3E-46 T 09-03-2017 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 RG43_RS08800 c75bff5d958d3809695d48d596226a11 159 Gene3D G3DSA:2.40.50.140 26 131 3.2E-42 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS03385 68dbc6e68df76ed5cb0ed1dd7743cfac 764 ProSitePatterns PS00850 Glycine radical domain signature. 734 742 - T 09-03-2017 IPR019777 Formate C-acetyltransferase glycine radical, conserved site RG43_RS03385 68dbc6e68df76ed5cb0ed1dd7743cfac 764 PIRSF PIRSF000379 12 764 0.0 T 09-03-2017 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 RG43_RS03385 68dbc6e68df76ed5cb0ed1dd7743cfac 764 SUPERFAMILY SSF51998 8 762 4.58E-285 T 09-03-2017 RG43_RS03385 68dbc6e68df76ed5cb0ed1dd7743cfac 764 Pfam PF01228 Glycine radical 634 745 4.6E-42 T 09-03-2017 IPR001150 Glycine radical domain GO:0003824|GO:0008152 RG43_RS03385 68dbc6e68df76ed5cb0ed1dd7743cfac 764 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 15 764 0.0 T 09-03-2017 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 RG43_RS03385 68dbc6e68df76ed5cb0ed1dd7743cfac 764 Gene3D G3DSA:3.20.70.20 9 762 0.0 T 09-03-2017 RG43_RS03385 68dbc6e68df76ed5cb0ed1dd7743cfac 764 Pfam PF02901 Pyruvate formate lyase-like 27 618 5.0E-195 T 09-03-2017 IPR004184 Pyruvate formate lyase domain GO:0003824 RG43_RS14365 5e558ba1cd449f14a9f6812490f206ee 152 SUPERFAMILY SSF103642 132 151 4.41E-8 T 09-03-2017 RG43_RS14365 5e558ba1cd449f14a9f6812490f206ee 152 Gene3D G3DSA:3.10.450.50 2 152 8.2E-56 T 09-03-2017 IPR032710 NTF2-like domain RG43_RS14365 5e558ba1cd449f14a9f6812490f206ee 152 Pfam PF02810 SEC-C motif 134 152 6.2E-11 T 09-03-2017 IPR004027 SEC-C motif RG43_RS14365 5e558ba1cd449f14a9f6812490f206ee 152 Pfam PF02810 SEC-C motif 3 19 1.2E-4 T 09-03-2017 IPR004027 SEC-C motif RG43_RS14365 5e558ba1cd449f14a9f6812490f206ee 152 SUPERFAMILY SSF54427 25 129 2.04E-36 T 09-03-2017 IPR032710 NTF2-like domain RG43_RS14365 5e558ba1cd449f14a9f6812490f206ee 152 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 1 128 30.207 T 09-03-2017 IPR023006 Uncharacterised protein family UPF0225 RG43_RS17180 1b6cf55feefa3cbbd6dc3efe5e43148d 352 Pfam PF03459 TOBE domain 290 350 1.8E-17 T 09-03-2017 IPR005116 Transport-associated OB, type 1 RG43_RS17180 1b6cf55feefa3cbbd6dc3efe5e43148d 352 SUPERFAMILY SSF50331 234 350 7.23E-22 T 09-03-2017 IPR008995 Molybdate/tungstate binding, C-terminal RG43_RS17180 1b6cf55feefa3cbbd6dc3efe5e43148d 352 Gene3D G3DSA:3.40.50.300 18 218 7.6E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS17180 1b6cf55feefa3cbbd6dc3efe5e43148d 352 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 2 350 3.4E-166 T 09-03-2017 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 RG43_RS17180 1b6cf55feefa3cbbd6dc3efe5e43148d 352 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS17180 1b6cf55feefa3cbbd6dc3efe5e43148d 352 Gene3D G3DSA:2.40.50.100 277 348 1.4E-22 T 09-03-2017 RG43_RS17180 1b6cf55feefa3cbbd6dc3efe5e43148d 352 Pfam PF00005 ABC transporter 19 156 7.7E-31 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS17180 1b6cf55feefa3cbbd6dc3efe5e43148d 352 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 288 351 9.0E-24 T 09-03-2017 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 RG43_RS17180 1b6cf55feefa3cbbd6dc3efe5e43148d 352 SUPERFAMILY SSF52540 7 219 2.72E-59 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS17180 1b6cf55feefa3cbbd6dc3efe5e43148d 352 SMART SM00382 23 206 4.0E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS22215 90484201402f546fb78912b0ce62160b 150 Gene3D G3DSA:2.60.120.370 1 149 9.9E-50 T 09-03-2017 IPR004375 YhcH/YjgK/YiaL family RG43_RS22215 90484201402f546fb78912b0ce62160b 150 Pfam PF04074 Domain of unknown function (DUF386) 1 147 9.7E-45 T 09-03-2017 IPR004375 YhcH/YjgK/YiaL family RG43_RS22215 90484201402f546fb78912b0ce62160b 150 SUPERFAMILY SSF51197 1 149 8.51E-43 T 09-03-2017 RG43_RS22215 90484201402f546fb78912b0ce62160b 150 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 150 1.3E-62 T 09-03-2017 IPR004375 YhcH/YjgK/YiaL family RG43_RS06115 ad0b61b2394295db9658c743299d08a2 236 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 7 230 30.9 T 09-03-2017 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 RG43_RS06115 ad0b61b2394295db9658c743299d08a2 236 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 9 227 2.5E-81 T 09-03-2017 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 RG43_RS06115 ad0b61b2394295db9658c743299d08a2 236 SUPERFAMILY SSF53448 8 227 8.02E-62 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS06115 ad0b61b2394295db9658c743299d08a2 236 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 8 229 3.5E-95 T 09-03-2017 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 RG43_RS06115 ad0b61b2394295db9658c743299d08a2 236 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 102 109 - T 09-03-2017 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 RG43_RS06115 ad0b61b2394295db9658c743299d08a2 236 Gene3D G3DSA:3.90.550.10 6 233 4.5E-79 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS15830 f02c85ffe7784203e2291bb5cd740ffe 172 Gene3D G3DSA:3.10.129.10 2 169 8.8E-62 T 09-03-2017 IPR029069 HotDog domain RG43_RS15830 f02c85ffe7784203e2291bb5cd740ffe 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 51.705 T 09-03-2017 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 RG43_RS15830 f02c85ffe7784203e2291bb5cd740ffe 172 Pfam PF07977 FabA-like domain 29 158 4.1E-54 T 09-03-2017 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 RG43_RS15830 f02c85ffe7784203e2291bb5cd740ffe 172 SUPERFAMILY SSF54637 3 169 1.16E-55 T 09-03-2017 IPR029069 HotDog domain RG43_RS15830 f02c85ffe7784203e2291bb5cd740ffe 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 3.1E-98 T 09-03-2017 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 RG43_RS12090 967159599024adac2179f56d77626ddc 154 Gene3D G3DSA:3.90.1720.10 38 154 4.1E-40 T 09-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain RG43_RS12090 967159599024adac2179f56d77626ddc 154 Pfam PF00877 NlpC/P60 family 47 153 5.7E-31 T 09-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain RG43_RS12090 967159599024adac2179f56d77626ddc 154 SUPERFAMILY SSF54001 34 154 3.07E-39 T 09-03-2017 RG43_RS17730 2d55648992a641b3ec35ab2473e31ed0 382 SUPERFAMILY SSF51338 1 53 3.46E-18 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RG43_RS17730 2d55648992a641b3ec35ab2473e31ed0 382 Gene3D G3DSA:3.20.20.140 55 349 3.1E-97 T 09-03-2017 RG43_RS17730 2d55648992a641b3ec35ab2473e31ed0 382 SUPERFAMILY SSF51556 54 350 1.36E-101 T 09-03-2017 IPR032466 Metal-dependent hydrolase RG43_RS17730 2d55648992a641b3ec35ab2473e31ed0 382 PIRSF PIRSF038994 1 382 1.6E-114 T 09-03-2017 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 RG43_RS17730 2d55648992a641b3ec35ab2473e31ed0 382 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 377 2.3E-184 T 09-03-2017 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 RG43_RS17730 2d55648992a641b3ec35ab2473e31ed0 382 Gene3D G3DSA:2.30.40.10 2 54 6.3E-9 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RG43_RS17730 2d55648992a641b3ec35ab2473e31ed0 382 Gene3D G3DSA:2.30.40.10 350 366 6.3E-9 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RG43_RS17730 2d55648992a641b3ec35ab2473e31ed0 382 Pfam PF01979 Amidohydrolase family 50 379 2.2E-48 T 09-03-2017 IPR006680 Amidohydrolase-related GO:0016787 RG43_RS17720 145493a0acf7746e2a38cbda4cc18193 648 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 463 7.1E-215 T 09-03-2017 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 RG43_RS17720 145493a0acf7746e2a38cbda4cc18193 648 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 500 624 1.5E-46 T 09-03-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 RG43_RS17720 145493a0acf7746e2a38cbda4cc18193 648 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 405 422 - T 09-03-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 RG43_RS17720 145493a0acf7746e2a38cbda4cc18193 648 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 563 575 - T 09-03-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 RG43_RS17720 145493a0acf7746e2a38cbda4cc18193 648 Gene3D G3DSA:3.30.1360.60 390 466 3.0E-24 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RG43_RS17720 145493a0acf7746e2a38cbda4cc18193 648 Pfam PF02378 Phosphotransferase system, EIIC 12 300 4.8E-75 T 09-03-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 RG43_RS17720 145493a0acf7746e2a38cbda4cc18193 648 SUPERFAMILY SSF55604 392 465 1.57E-17 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RG43_RS17720 145493a0acf7746e2a38cbda4cc18193 648 Pfam PF00367 phosphotransferase system, EIIB 396 427 9.6E-12 T 09-03-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 RG43_RS17720 145493a0acf7746e2a38cbda4cc18193 648 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 501 621 1.8E-47 T 09-03-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 RG43_RS17720 145493a0acf7746e2a38cbda4cc18193 648 Gene3D G3DSA:2.70.70.10 499 643 8.5E-56 T 09-03-2017 RG43_RS17720 145493a0acf7746e2a38cbda4cc18193 648 SUPERFAMILY SSF51261 497 646 2.44E-50 T 09-03-2017 IPR011055 Duplicated hybrid motif RG43_RS17720 145493a0acf7746e2a38cbda4cc18193 648 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 360 452 7.7E-26 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RG43_RS05160 222365e15aa5d1cab04140d384f4247f 492 Gene3D G3DSA:3.40.1080.10 8 218 6.9E-40 T 09-03-2017 RG43_RS05160 222365e15aa5d1cab04140d384f4247f 492 Gene3D G3DSA:3.40.810.20 224 484 2.1E-72 T 09-03-2017 RG43_RS05160 222365e15aa5d1cab04140d384f4247f 492 SUPERFAMILY SSF100950 7 219 1.37E-59 T 09-03-2017 RG43_RS05160 222365e15aa5d1cab04140d384f4247f 492 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 317 461 6.6E-41 T 09-03-2017 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain RG43_RS05160 222365e15aa5d1cab04140d384f4247f 492 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 4 490 1.6E-227 T 09-03-2017 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 RG43_RS05160 222365e15aa5d1cab04140d384f4247f 492 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 1 213 1.2E-75 T 09-03-2017 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 RG43_RS05160 222365e15aa5d1cab04140d384f4247f 492 SUPERFAMILY SSF100950 226 490 8.29E-71 T 09-03-2017 RG43_RS15105 982e8fe64b3c7e5a1ad44dbbd2c9d022 317 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 317 70.49 T 09-03-2017 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 RG43_RS15105 982e8fe64b3c7e5a1ad44dbbd2c9d022 317 SUPERFAMILY SSF53901 3 317 1.35E-71 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 RG43_RS15105 982e8fe64b3c7e5a1ad44dbbd2c9d022 317 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 228 316 5.0E-37 T 09-03-2017 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 RG43_RS15105 982e8fe64b3c7e5a1ad44dbbd2c9d022 317 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 317 6.8E-152 T 09-03-2017 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 RG43_RS15105 982e8fe64b3c7e5a1ad44dbbd2c9d022 317 Gene3D G3DSA:3.40.47.10 161 316 4.4E-53 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 RG43_RS15105 982e8fe64b3c7e5a1ad44dbbd2c9d022 317 Gene3D G3DSA:3.40.47.10 1 160 2.5E-65 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 RG43_RS15105 982e8fe64b3c7e5a1ad44dbbd2c9d022 317 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 1.8E-29 T 09-03-2017 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 RG43_RS17430 80831e5897dcdbfa195d6398bb4b3eea 427 Pfam PF00285 Citrate synthase, C-terminal domain 46 410 6.7E-132 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 RG43_RS17430 80831e5897dcdbfa195d6398bb4b3eea 427 PIRSF PIRSF001369 38 427 2.8E-177 T 09-03-2017 IPR024176 Citrate synthase, bacterial-type RG43_RS17430 80831e5897dcdbfa195d6398bb4b3eea 427 Gene3D G3DSA:1.10.580.10 52 280 2.1E-95 T 09-03-2017 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 RG43_RS17430 80831e5897dcdbfa195d6398bb4b3eea 427 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 09-03-2017 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 RG43_RS17430 80831e5897dcdbfa195d6398bb4b3eea 427 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 14 421 2.8E-244 T 09-03-2017 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 RG43_RS17430 80831e5897dcdbfa195d6398bb4b3eea 427 SUPERFAMILY SSF48256 9 423 4.97E-168 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 RG43_RS17430 80831e5897dcdbfa195d6398bb4b3eea 427 Gene3D G3DSA:1.10.230.10 281 373 3.7E-43 T 09-03-2017 IPR016143 Citrate synthase-like, small alpha subdomain Reactome: R-HSA-163765|Reactome: R-HSA-75105 RG43_RS17430 80831e5897dcdbfa195d6398bb4b3eea 427 PRINTS PR00143 Citrate synthase signature 165 178 5.1E-56 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 RG43_RS17430 80831e5897dcdbfa195d6398bb4b3eea 427 PRINTS PR00143 Citrate synthase signature 359 375 5.1E-56 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 RG43_RS17430 80831e5897dcdbfa195d6398bb4b3eea 427 PRINTS PR00143 Citrate synthase signature 219 234 5.1E-56 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 RG43_RS17430 80831e5897dcdbfa195d6398bb4b3eea 427 PRINTS PR00143 Citrate synthase signature 241 269 5.1E-56 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 RG43_RS17430 80831e5897dcdbfa195d6398bb4b3eea 427 PRINTS PR00143 Citrate synthase signature 379 393 5.1E-56 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 RG43_RS17430 80831e5897dcdbfa195d6398bb4b3eea 427 PRINTS PR00143 Citrate synthase signature 296 316 5.1E-56 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 RG43_RS02465 664a2e56c1e17b694a7b948bb241b549 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 25.319 T 09-03-2017 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02465 664a2e56c1e17b694a7b948bb241b549 118 Gene3D G3DSA:4.10.910.10 72 118 8.3E-28 T 09-03-2017 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02465 664a2e56c1e17b694a7b948bb241b549 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 09-03-2017 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02465 664a2e56c1e17b694a7b948bb241b549 118 SUPERFAMILY SSF46946 2 114 4.71E-45 T 09-03-2017 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 RG43_RS02465 664a2e56c1e17b694a7b948bb241b549 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 1.8E-52 T 09-03-2017 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS02465 664a2e56c1e17b694a7b948bb241b549 118 PIRSF PIRSF002134 1 118 5.0E-41 T 09-03-2017 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02465 664a2e56c1e17b694a7b948bb241b549 118 Gene3D G3DSA:1.10.8.50 2 71 8.9E-27 T 09-03-2017 RG43_RS02465 664a2e56c1e17b694a7b948bb241b549 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 7.2E-34 T 09-03-2017 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS06085 f309d7e214a62de8c6c222039bd9b1d7 345 Pfam PF04389 Peptidase family M28 100 330 8.4E-35 T 09-03-2017 IPR007484 Peptidase M28 RG43_RS06085 f309d7e214a62de8c6c222039bd9b1d7 345 Gene3D G3DSA:3.40.630.10 37 344 2.6E-47 T 09-03-2017 RG43_RS06085 f309d7e214a62de8c6c222039bd9b1d7 345 SUPERFAMILY SSF53187 42 316 2.54E-37 T 09-03-2017 RG43_RS12705 06ef6b233f71506f2b7f368b08767b88 417 SUPERFAMILY SSF103473 27 414 1.57E-64 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS12705 06ef6b233f71506f2b7f368b08767b88 417 ProSitePatterns PS00216 Sugar transport proteins signature 1. 91 107 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RG43_RS12705 06ef6b233f71506f2b7f368b08767b88 417 Gene3D G3DSA:1.20.1250.20 36 216 1.8E-32 T 09-03-2017 RG43_RS12705 06ef6b233f71506f2b7f368b08767b88 417 Gene3D G3DSA:1.20.1250.20 237 412 2.2E-17 T 09-03-2017 RG43_RS12705 06ef6b233f71506f2b7f368b08767b88 417 Pfam PF07690 Major Facilitator Superfamily 41 261 3.5E-27 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS16020 e440a509009f132cc0ec21378fd115bc 582 Gene3D G3DSA:1.20.1560.10 13 325 4.4E-71 T 09-03-2017 RG43_RS16020 e440a509009f132cc0ec21378fd115bc 582 SUPERFAMILY SSF52540 332 580 1.04E-96 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16020 e440a509009f132cc0ec21378fd115bc 582 Gene3D G3DSA:3.40.50.300 342 574 2.0E-86 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16020 e440a509009f132cc0ec21378fd115bc 582 SMART SM00382 368 555 1.4E-17 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS16020 e440a509009f132cc0ec21378fd115bc 582 SUPERFAMILY SSF90123 8 325 3.01E-75 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RG43_RS16020 e440a509009f132cc0ec21378fd115bc 582 Pfam PF00664 ABC transporter transmembrane region 27 297 2.8E-61 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RG43_RS16020 e440a509009f132cc0ec21378fd115bc 582 Pfam PF00005 ABC transporter 359 509 1.5E-35 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS16020 e440a509009f132cc0ec21378fd115bc 582 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS16020 e440a509009f132cc0ec21378fd115bc 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 581 1.0E-275 T 09-03-2017 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 RG43_RS13420 e99ce564f2ad7e8b8c1c4c90d3b296d2 178 Gene3D G3DSA:1.10.260.40 2 79 1.6E-25 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS13420 e99ce564f2ad7e8b8c1c4c90d3b296d2 178 Gene3D G3DSA:2.60.120.10 85 177 5.6E-34 T 09-03-2017 IPR014710 RmlC-like jelly roll fold RG43_RS13420 e99ce564f2ad7e8b8c1c4c90d3b296d2 178 Pfam PF07883 Cupin domain 104 170 2.4E-9 T 09-03-2017 IPR013096 Cupin 2, conserved barrel RG43_RS13420 e99ce564f2ad7e8b8c1c4c90d3b296d2 178 SMART SM00530 11 66 1.2E-15 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RG43_RS13420 e99ce564f2ad7e8b8c1c4c90d3b296d2 178 Pfam PF01381 Helix-turn-helix 12 64 1.0E-16 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RG43_RS13420 e99ce564f2ad7e8b8c1c4c90d3b296d2 178 SUPERFAMILY SSF47413 4 71 1.39E-18 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS13420 e99ce564f2ad7e8b8c1c4c90d3b296d2 178 SUPERFAMILY SSF51182 51 176 2.48E-22 T 09-03-2017 IPR011051 RmlC-like cupin domain RG43_RS16350 6ce61e826b17c7c70a5e13980790f51c 158 Pfam PF10722 Putative bacterial sensory transduction regulator 9 131 1.1E-16 T 09-03-2017 IPR019660 Putative sensory transduction regulator YbjN RG43_RS15260 31417709d1eb599bcaf7b875f4e96191 348 Hamap MF_00219 Dihydroorotase [pyrC]. 6 347 63.547 T 09-03-2017 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 RG43_RS15260 31417709d1eb599bcaf7b875f4e96191 348 ProSitePatterns PS00483 Dihydroorotase signature 2. 249 260 - T 09-03-2017 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 RG43_RS15260 31417709d1eb599bcaf7b875f4e96191 348 ProSitePatterns PS00482 Dihydroorotase signature 1. 15 23 - T 09-03-2017 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 RG43_RS15260 31417709d1eb599bcaf7b875f4e96191 348 Pfam PF01979 Amidohydrolase family 15 307 6.3E-22 T 09-03-2017 IPR006680 Amidohydrolase-related GO:0016787 RG43_RS15260 31417709d1eb599bcaf7b875f4e96191 348 PIRSF PIRSF001237 4 348 7.4E-142 T 09-03-2017 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 RG43_RS15260 31417709d1eb599bcaf7b875f4e96191 348 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 8 347 9.1E-169 T 09-03-2017 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 RG43_RS15260 31417709d1eb599bcaf7b875f4e96191 348 Gene3D G3DSA:3.20.20.140 6 347 6.2E-135 T 09-03-2017 RG43_RS15260 31417709d1eb599bcaf7b875f4e96191 348 SUPERFAMILY SSF51556 8 347 3.71E-149 T 09-03-2017 IPR032466 Metal-dependent hydrolase RG43_RS15010 9ff6dd7a7b30ba73eab5708460772111 119 Pfam PF01230 HIT domain 12 109 5.6E-30 T 09-03-2017 IPR001310 Histidine triad (HIT) protein RG43_RS15010 9ff6dd7a7b30ba73eab5708460772111 119 SUPERFAMILY SSF54197 3 113 1.33E-35 T 09-03-2017 IPR011146 HIT-like domain GO:0003824 RG43_RS15010 9ff6dd7a7b30ba73eab5708460772111 119 PRINTS PR00332 Histidine triad family signature 6 22 6.0E-20 T 09-03-2017 IPR001310 Histidine triad (HIT) protein RG43_RS15010 9ff6dd7a7b30ba73eab5708460772111 119 PRINTS PR00332 Histidine triad family signature 95 105 6.0E-20 T 09-03-2017 IPR001310 Histidine triad (HIT) protein RG43_RS15010 9ff6dd7a7b30ba73eab5708460772111 119 PRINTS PR00332 Histidine triad family signature 27 45 6.0E-20 T 09-03-2017 IPR001310 Histidine triad (HIT) protein RG43_RS15010 9ff6dd7a7b30ba73eab5708460772111 119 Gene3D G3DSA:3.30.428.10 3 110 7.9E-38 T 09-03-2017 IPR011146 HIT-like domain GO:0003824 RG43_RS15010 9ff6dd7a7b30ba73eab5708460772111 119 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 09-03-2017 IPR019808 Histidine triad, conserved site RG43_RS07255 cf8c51b1b853cb71e9682a69dce296ef 525 Pfam PF02540 NAD synthase 223 257 1.2E-6 T 09-03-2017 IPR022310 NAD/GMP synthase RG43_RS07255 cf8c51b1b853cb71e9682a69dce296ef 525 SUPERFAMILY SSF52317 5 204 9.01E-59 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like RG43_RS07255 cf8c51b1b853cb71e9682a69dce296ef 525 Pfam PF00117 Glutamine amidotransferase class-I 12 199 9.2E-42 T 09-03-2017 IPR017926 Glutamine amidotransferase RG43_RS07255 cf8c51b1b853cb71e9682a69dce296ef 525 PRINTS PR00097 Anthranilate synthase component II signature 81 92 2.6E-6 T 09-03-2017 RG43_RS07255 cf8c51b1b853cb71e9682a69dce296ef 525 PRINTS PR00097 Anthranilate synthase component II signature 54 63 2.6E-6 T 09-03-2017 RG43_RS07255 cf8c51b1b853cb71e9682a69dce296ef 525 PRINTS PR00097 Anthranilate synthase component II signature 177 190 2.6E-6 T 09-03-2017 RG43_RS07255 cf8c51b1b853cb71e9682a69dce296ef 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 177 190 1.1E-7 T 09-03-2017 RG43_RS07255 cf8c51b1b853cb71e9682a69dce296ef 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.1E-7 T 09-03-2017 RG43_RS07255 cf8c51b1b853cb71e9682a69dce296ef 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.1E-7 T 09-03-2017 RG43_RS07255 cf8c51b1b853cb71e9682a69dce296ef 525 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 525 56.678 T 09-03-2017 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 RG43_RS07255 cf8c51b1b853cb71e9682a69dce296ef 525 SUPERFAMILY SSF54810 405 525 1.44E-51 T 09-03-2017 RG43_RS07255 cf8c51b1b853cb71e9682a69dce296ef 525 Gene3D G3DSA:3.40.50.880 3 223 1.4E-61 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like RG43_RS07255 cf8c51b1b853cb71e9682a69dce296ef 525 Gene3D G3DSA:3.30.300.10 401 525 1.0E-53 T 09-03-2017 RG43_RS07255 cf8c51b1b853cb71e9682a69dce296ef 525 Pfam PF00958 GMP synthase C terminal domain 433 524 6.0E-44 T 09-03-2017 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 RG43_RS07255 cf8c51b1b853cb71e9682a69dce296ef 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 9.4E-7 T 09-03-2017 RG43_RS07255 cf8c51b1b853cb71e9682a69dce296ef 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 9.4E-7 T 09-03-2017 RG43_RS07255 cf8c51b1b853cb71e9682a69dce296ef 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 9.4E-7 T 09-03-2017 RG43_RS07255 cf8c51b1b853cb71e9682a69dce296ef 525 Gene3D G3DSA:3.40.50.620 224 399 1.7E-58 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS07255 cf8c51b1b853cb71e9682a69dce296ef 525 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 212 525 2.0E-156 T 09-03-2017 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 RG43_RS07255 cf8c51b1b853cb71e9682a69dce296ef 525 SUPERFAMILY SSF52402 197 420 3.97E-59 T 09-03-2017 RG43_RS07255 cf8c51b1b853cb71e9682a69dce296ef 525 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 205 3.4E-85 T 09-03-2017 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 RG43_RS14295 b7cf7c24afbdd6b77a39a81d93ce65da 109 Gene3D G3DSA:3.10.450.140 9 109 5.0E-51 T 09-03-2017 IPR007376 dsDNA mimic, putative RG43_RS14295 b7cf7c24afbdd6b77a39a81d93ce65da 109 SUPERFAMILY SSF102816 3 109 7.32E-51 T 09-03-2017 IPR007376 dsDNA mimic, putative RG43_RS14295 b7cf7c24afbdd6b77a39a81d93ce65da 109 Hamap MF_00680 UPF0263 protein YciU [yciU]. 5 109 35.934 T 09-03-2017 IPR007376 dsDNA mimic, putative RG43_RS14295 b7cf7c24afbdd6b77a39a81d93ce65da 109 Pfam PF04269 Protein of unknown function, DUF440 8 109 9.0E-47 T 09-03-2017 IPR007376 dsDNA mimic, putative RG43_RS14295 b7cf7c24afbdd6b77a39a81d93ce65da 109 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 7 109 1.0E-53 T 09-03-2017 IPR007376 dsDNA mimic, putative RG43_RS14295 b7cf7c24afbdd6b77a39a81d93ce65da 109 PIRSF PIRSF004916 1 109 2.4E-58 T 09-03-2017 IPR007376 dsDNA mimic, putative RG43_RS19490 15bb12c4b41e2a794821e4025a58c4f3 264 Pfam PF00196 Bacterial regulatory proteins, luxR family 135 179 2.7E-8 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS19490 15bb12c4b41e2a794821e4025a58c4f3 264 SMART SM00421 132 189 4.1E-6 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS19490 15bb12c4b41e2a794821e4025a58c4f3 264 SUPERFAMILY SSF46894 117 190 1.7E-11 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RG43_RS19490 15bb12c4b41e2a794821e4025a58c4f3 264 Gene3D G3DSA:1.10.10.10 127 181 1.4E-9 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS16200 2af9790425e583c73e4c4e65cf6a70d1 74 SUPERFAMILY SSF50249 1 66 8.57E-23 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS16200 2af9790425e583c73e4c4e65cf6a70d1 74 Gene3D G3DSA:2.40.50.140 1 65 1.9E-29 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS16200 2af9790425e583c73e4c4e65cf6a70d1 74 PIRSF PIRSF002599 1 74 2.9E-23 T 09-03-2017 IPR012156 Cold shock, CspA GO:0003676 RG43_RS16200 2af9790425e583c73e4c4e65cf6a70d1 74 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 09-03-2017 IPR019844 Cold-shock conserved site RG43_RS16200 2af9790425e583c73e4c4e65cf6a70d1 74 SMART SM00357 3 67 6.1E-29 T 09-03-2017 IPR011129 Cold shock protein GO:0003676 RG43_RS16200 2af9790425e583c73e4c4e65cf6a70d1 74 PRINTS PR00050 Cold shock protein signature 25 34 2.8E-16 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RG43_RS16200 2af9790425e583c73e4c4e65cf6a70d1 74 PRINTS PR00050 Cold shock protein signature 4 19 2.8E-16 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RG43_RS16200 2af9790425e583c73e4c4e65cf6a70d1 74 PRINTS PR00050 Cold shock protein signature 40 58 2.8E-16 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RG43_RS16200 2af9790425e583c73e4c4e65cf6a70d1 74 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 68 2.1E-43 T 09-03-2017 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355|GO:0006950 RG43_RS16200 2af9790425e583c73e4c4e65cf6a70d1 74 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 6.4E-29 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RG43_RS01165 2c940f09aefa4f2279e3916eea388307 1157 SUPERFAMILY SSF48452 70 221 1.39E-19 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS01165 2c940f09aefa4f2279e3916eea388307 1157 SUPERFAMILY SSF48452 276 430 1.39E-19 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS01165 2c940f09aefa4f2279e3916eea388307 1157 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 802 1136 2.1E-118 T 09-03-2017 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 RG43_RS01165 2c940f09aefa4f2279e3916eea388307 1157 SUPERFAMILY SSF48452 579 737 1.37E-8 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS01165 2c940f09aefa4f2279e3916eea388307 1157 Pfam PF14559 Tetratricopeptide repeat 615 684 5.6E-7 T 09-03-2017 RG43_RS01165 2c940f09aefa4f2279e3916eea388307 1157 Gene3D G3DSA:1.25.40.10 578 737 6.3E-11 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS01165 2c940f09aefa4f2279e3916eea388307 1157 Gene3D G3DSA:1.25.40.10 57 214 7.3E-10 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS01165 2c940f09aefa4f2279e3916eea388307 1157 SMART SM00028 303 336 2.4E-4 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 RG43_RS01165 2c940f09aefa4f2279e3916eea388307 1157 SMART SM00028 351 384 34.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 RG43_RS01165 2c940f09aefa4f2279e3916eea388307 1157 SMART SM00028 461 494 170.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 RG43_RS01165 2c940f09aefa4f2279e3916eea388307 1157 SMART SM00028 269 302 500.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 RG43_RS01165 2c940f09aefa4f2279e3916eea388307 1157 SMART SM00028 385 418 0.16 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 RG43_RS01165 2c940f09aefa4f2279e3916eea388307 1157 SMART SM00028 603 636 290.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 RG43_RS01165 2c940f09aefa4f2279e3916eea388307 1157 SMART SM00028 671 704 270.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 RG43_RS01165 2c940f09aefa4f2279e3916eea388307 1157 Pfam PF13432 Tetratricopeptide repeat 389 442 1.6E-5 T 09-03-2017 RG43_RS01165 2c940f09aefa4f2279e3916eea388307 1157 Pfam PF13432 Tetratricopeptide repeat 274 336 2.3E-5 T 09-03-2017 RG43_RS01165 2c940f09aefa4f2279e3916eea388307 1157 Gene3D G3DSA:1.25.40.10 274 359 5.7E-11 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS01165 2c940f09aefa4f2279e3916eea388307 1157 SUPERFAMILY SSF48452 466 545 6.4E-13 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS01165 2c940f09aefa4f2279e3916eea388307 1157 SUPERFAMILY SSF48452 609 660 6.4E-13 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS01165 2c940f09aefa4f2279e3916eea388307 1157 Gene3D G3DSA:1.25.40.10 360 552 2.7E-21 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS03170 fa8cddfb9f61dd4c362dc4c787bf86b4 414 PRINTS PR00166 Aromatic amino acid permease signature 327 345 2.8E-105 T 09-03-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 RG43_RS03170 fa8cddfb9f61dd4c362dc4c787bf86b4 414 PRINTS PR00166 Aromatic amino acid permease signature 155 175 2.8E-105 T 09-03-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 RG43_RS03170 fa8cddfb9f61dd4c362dc4c787bf86b4 414 PRINTS PR00166 Aromatic amino acid permease signature 45 64 2.8E-105 T 09-03-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 RG43_RS03170 fa8cddfb9f61dd4c362dc4c787bf86b4 414 PRINTS PR00166 Aromatic amino acid permease signature 90 110 2.8E-105 T 09-03-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 RG43_RS03170 fa8cddfb9f61dd4c362dc4c787bf86b4 414 PRINTS PR00166 Aromatic amino acid permease signature 293 312 2.8E-105 T 09-03-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 RG43_RS03170 fa8cddfb9f61dd4c362dc4c787bf86b4 414 PRINTS PR00166 Aromatic amino acid permease signature 348 367 2.8E-105 T 09-03-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 RG43_RS03170 fa8cddfb9f61dd4c362dc4c787bf86b4 414 PRINTS PR00166 Aromatic amino acid permease signature 18 41 2.8E-105 T 09-03-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 RG43_RS03170 fa8cddfb9f61dd4c362dc4c787bf86b4 414 PRINTS PR00166 Aromatic amino acid permease signature 193 215 2.8E-105 T 09-03-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 RG43_RS03170 fa8cddfb9f61dd4c362dc4c787bf86b4 414 PRINTS PR00166 Aromatic amino acid permease signature 232 251 2.8E-105 T 09-03-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 RG43_RS03170 fa8cddfb9f61dd4c362dc4c787bf86b4 414 Pfam PF03222 Tryptophan/tyrosine permease family 10 402 1.3E-154 T 09-03-2017 IPR018227 Tryptophan/tyrosine permease GO:0003333 RG43_RS03170 fa8cddfb9f61dd4c362dc4c787bf86b4 414 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 15 395 1.7E-161 T 09-03-2017 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 RG43_RS03170 fa8cddfb9f61dd4c362dc4c787bf86b4 414 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 25 41 - T 09-03-2017 IPR013061 Tryptophan/tryrosine permease, conserved site RG43_RS17920 95df53110b4b0bff22f15b71a45ee620 87 SUPERFAMILY SSF117991 1 87 3.4E-31 T 09-03-2017 IPR027471 YbeD-like domain RG43_RS17920 95df53110b4b0bff22f15b71a45ee620 87 Pfam PF04359 Protein of unknown function (DUF493) 7 87 5.6E-29 T 09-03-2017 IPR007454 Uncharacterised protein family UPF0250 RG43_RS17920 95df53110b4b0bff22f15b71a45ee620 87 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 1 87 26.681 T 09-03-2017 IPR007454 Uncharacterised protein family UPF0250 RG43_RS17920 95df53110b4b0bff22f15b71a45ee620 87 Gene3D G3DSA:3.30.70.1460 1 87 1.8E-37 T 09-03-2017 IPR027471 YbeD-like domain RG43_RS22530 39e1d3d1abbedcd7ac995d2466e32770 228 Gene3D G3DSA:3.40.225.10 2 227 1.3E-72 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal RG43_RS22530 39e1d3d1abbedcd7ac995d2466e32770 228 Hamap MF_01952 L-ribulose-5-phosphate 4-epimerase UlaF [ulaF]. 1 228 66.554 T 09-03-2017 IPR023499 L-ribulose-5-phosphate 4-epimerase UlaF GO:0008742 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 RG43_RS22530 39e1d3d1abbedcd7ac995d2466e32770 228 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 7 193 1.0E-47 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal RG43_RS22530 39e1d3d1abbedcd7ac995d2466e32770 228 SMART SM01007 6 194 2.0E-68 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal RG43_RS22530 39e1d3d1abbedcd7ac995d2466e32770 228 SUPERFAMILY SSF53639 2 219 1.26E-69 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal RG43_RS18760 a84db6ec329e2f5d5b1389f6f163de1c 272 SUPERFAMILY SSF56784 1 262 1.5E-60 T 09-03-2017 IPR023214 HAD-like domain RG43_RS18760 a84db6ec329e2f5d5b1389f6f163de1c 272 Gene3D G3DSA:3.30.1240.10 98 174 6.2E-13 T 09-03-2017 RG43_RS18760 a84db6ec329e2f5d5b1389f6f163de1c 272 Gene3D G3DSA:3.40.50.1000 2 72 4.0E-45 T 09-03-2017 IPR023214 HAD-like domain RG43_RS18760 a84db6ec329e2f5d5b1389f6f163de1c 272 Gene3D G3DSA:3.40.50.1000 175 263 4.0E-45 T 09-03-2017 IPR023214 HAD-like domain RG43_RS18760 a84db6ec329e2f5d5b1389f6f163de1c 272 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 229 3.3E-46 T 09-03-2017 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 RG43_RS18760 a84db6ec329e2f5d5b1389f6f163de1c 272 Hamap MF_01847 HMP-PP phosphatase [cof]. 1 272 63.244 T 09-03-2017 IPR023938 HMP-PP phosphatase GO:0016818 RG43_RS18760 a84db6ec329e2f5d5b1389f6f163de1c 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 258 1.8E-51 T 09-03-2017 IPR023214 HAD-like domain RG43_RS18760 a84db6ec329e2f5d5b1389f6f163de1c 272 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 09-03-2017 IPR000150 Cof protein GO:0016787 RG43_RS18760 a84db6ec329e2f5d5b1389f6f163de1c 272 ProSitePatterns PS01229 Hypothetical cof family signature 2. 210 232 - T 09-03-2017 RG43_RS18760 a84db6ec329e2f5d5b1389f6f163de1c 272 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 258 1.1E-62 T 09-03-2017 IPR000150 Cof protein GO:0016787 RG43_RS19830 986a928fceb003a0f7a1e508424319cb 91 Gene3D G3DSA:2.40.10.210 23 91 2.2E-37 T 09-03-2017 RG43_RS19830 986a928fceb003a0f7a1e508424319cb 91 Pfam PF13856 ATP-binding sugar transporter from pro-phage 1 88 7.5E-15 T 09-03-2017 IPR025601 ATP-binding sugar transporter-like protein RG43_RS19830 986a928fceb003a0f7a1e508424319cb 91 SUPERFAMILY SSF69279 1 91 1.7E-34 T 09-03-2017 RG43_RS20255 f517d892f4764af49f722f6e14b4e1ca 71 Gene3D G3DSA:1.10.443.10 15 53 1.7E-4 T 09-03-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RG43_RS20255 f517d892f4764af49f722f6e14b4e1ca 71 SUPERFAMILY SSF56349 15 48 5.59E-5 T 09-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RG43_RS22830 6279ec3722197af3533a9fd2b8d54074 548 Hamap MF_00600 60 kDa chaperonin [groL]. 2 547 41.614 T 09-03-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 RG43_RS22830 6279ec3722197af3533a9fd2b8d54074 548 Gene3D G3DSA:3.50.7.10 189 368 6.0E-99 T 09-03-2017 IPR027409 GroEL-like apical domain RG43_RS22830 6279ec3722197af3533a9fd2b8d54074 548 SUPERFAMILY SSF48592 406 521 5.88E-78 T 09-03-2017 RG43_RS22830 6279ec3722197af3533a9fd2b8d54074 548 SUPERFAMILY SSF48592 7 134 5.88E-78 T 09-03-2017 RG43_RS22830 6279ec3722197af3533a9fd2b8d54074 548 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 2.2E-94 T 09-03-2017 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 RG43_RS22830 6279ec3722197af3533a9fd2b8d54074 548 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 09-03-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 RG43_RS22830 6279ec3722197af3533a9fd2b8d54074 548 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 09-03-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 RG43_RS22830 6279ec3722197af3533a9fd2b8d54074 548 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 09-03-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 RG43_RS22830 6279ec3722197af3533a9fd2b8d54074 548 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 09-03-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 RG43_RS22830 6279ec3722197af3533a9fd2b8d54074 548 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 09-03-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 RG43_RS22830 6279ec3722197af3533a9fd2b8d54074 548 SUPERFAMILY SSF54849 137 203 1.42E-24 T 09-03-2017 RG43_RS22830 6279ec3722197af3533a9fd2b8d54074 548 Gene3D G3DSA:1.10.560.10 369 518 3.8E-40 T 09-03-2017 IPR027413 GroEL-like equatorial domain RG43_RS22830 6279ec3722197af3533a9fd2b8d54074 548 Gene3D G3DSA:1.10.560.10 3 188 1.4E-47 T 09-03-2017 IPR027413 GroEL-like equatorial domain RG43_RS22830 6279ec3722197af3533a9fd2b8d54074 548 SUPERFAMILY SSF52029 185 376 3.14E-83 T 09-03-2017 IPR027409 GroEL-like apical domain RG43_RS22830 6279ec3722197af3533a9fd2b8d54074 548 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 2.2E-257 T 09-03-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 RG43_RS22830 6279ec3722197af3533a9fd2b8d54074 548 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 09-03-2017 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020 RG43_RS02500 b3be60b2dbb598bd7706e64761b3c28b 72 Pfam PF03889 Domain of unknown function 9 45 1.4E-22 T 09-03-2017 IPR005589 Protein of unknown function DUF331 RG43_RS23440 3b188c398a3baedb4551e575bd27bb0b 290 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 5 288 30.375 T 09-03-2017 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 RG43_RS23440 3b188c398a3baedb4551e575bd27bb0b 290 Pfam PF01040 UbiA prenyltransferase family 28 271 1.9E-68 T 09-03-2017 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 RG43_RS23440 3b188c398a3baedb4551e575bd27bb0b 290 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 67 89 - T 09-03-2017 IPR030470 UbiA prenyltransferase conserved site RG43_RS23440 3b188c398a3baedb4551e575bd27bb0b 290 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 11 287 4.1E-112 T 09-03-2017 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 RG43_RS18585 7239087e5d36b9bbcc76092ec02d9aa8 406 Pfam PF07690 Major Facilitator Superfamily 31 264 9.5E-25 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS18585 7239087e5d36b9bbcc76092ec02d9aa8 406 SUPERFAMILY SSF103473 20 401 2.49E-56 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS18585 7239087e5d36b9bbcc76092ec02d9aa8 406 Gene3D G3DSA:1.20.1250.20 222 401 4.9E-21 T 09-03-2017 RG43_RS18585 7239087e5d36b9bbcc76092ec02d9aa8 406 Gene3D G3DSA:1.20.1250.20 27 207 3.0E-21 T 09-03-2017 RG43_RS04465 be4eadc6a3a7d89db315e4cdd6b02130 392 SUPERFAMILY SSF53067 2 139 6.99E-26 T 09-03-2017 RG43_RS04465 be4eadc6a3a7d89db315e4cdd6b02130 392 PIRSF PIRSF015761 7 392 3.0E-28 T 09-03-2017 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 RG43_RS04465 be4eadc6a3a7d89db315e4cdd6b02130 392 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 7 391 2.7E-107 T 09-03-2017 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 RG43_RS04465 be4eadc6a3a7d89db315e4cdd6b02130 392 Pfam PF12693 GspL periplasmic domain 234 391 6.6E-46 T 09-03-2017 IPR025691 GspL periplasmic domain RG43_RS04465 be4eadc6a3a7d89db315e4cdd6b02130 392 Pfam PF05134 Type II secretion system (T2SS), protein L 37 192 2.8E-17 T 09-03-2017 IPR024230 GspL, cytoplasmic actin-ATPase-like domain RG43_RS26840 be4eadc6a3a7d89db315e4cdd6b02130 392 SUPERFAMILY SSF53067 2 139 6.99E-26 T 09-03-2017 RG43_RS26840 be4eadc6a3a7d89db315e4cdd6b02130 392 PIRSF PIRSF015761 7 392 3.0E-28 T 09-03-2017 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 RG43_RS26840 be4eadc6a3a7d89db315e4cdd6b02130 392 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 7 391 2.7E-107 T 09-03-2017 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 RG43_RS26840 be4eadc6a3a7d89db315e4cdd6b02130 392 Pfam PF12693 GspL periplasmic domain 234 391 6.6E-46 T 09-03-2017 IPR025691 GspL periplasmic domain RG43_RS26840 be4eadc6a3a7d89db315e4cdd6b02130 392 Pfam PF05134 Type II secretion system (T2SS), protein L 37 192 2.8E-17 T 09-03-2017 IPR024230 GspL, cytoplasmic actin-ATPase-like domain RG43_RS20650 5c95adf3bad4ca4fb76bb94204974137 283 Pfam PF00889 Elongation factor TS 71 263 1.5E-66 T 09-03-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RG43_RS20650 5c95adf3bad4ca4fb76bb94204974137 283 SUPERFAMILY SSF54713 56 139 1.24E-20 T 09-03-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RG43_RS20650 5c95adf3bad4ca4fb76bb94204974137 283 Gene3D G3DSA:3.30.479.20 142 178 1.6E-31 T 09-03-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RG43_RS20650 5c95adf3bad4ca4fb76bb94204974137 283 Gene3D G3DSA:3.30.479.20 227 262 1.6E-31 T 09-03-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RG43_RS20650 5c95adf3bad4ca4fb76bb94204974137 283 SUPERFAMILY SSF54713 142 281 1.31E-53 T 09-03-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RG43_RS20650 5c95adf3bad4ca4fb76bb94204974137 283 Hamap MF_00050 Elongation factor Ts [tsf]. 1 280 80.24 T 09-03-2017 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RG43_RS20650 5c95adf3bad4ca4fb76bb94204974137 283 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 09-03-2017 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RG43_RS20650 5c95adf3bad4ca4fb76bb94204974137 283 Gene3D G3DSA:1.10.8.10 2 55 7.0E-28 T 09-03-2017 RG43_RS20650 5c95adf3bad4ca4fb76bb94204974137 283 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 282 3.1E-123 T 09-03-2017 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RG43_RS20650 5c95adf3bad4ca4fb76bb94204974137 283 SUPERFAMILY SSF46934 4 54 2.24E-18 T 09-03-2017 IPR009060 UBA-like GO:0005515 RG43_RS20650 5c95adf3bad4ca4fb76bb94204974137 283 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 09-03-2017 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RG43_RS20650 5c95adf3bad4ca4fb76bb94204974137 283 Gene3D G3DSA:1.10.286.20 183 226 5.7E-20 T 09-03-2017 RG43_RS17885 dc84e6331dbae16287575770056107d9 203 SMART SM00855 2 156 3.0E-21 T 09-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 RG43_RS17885 dc84e6331dbae16287575770056107d9 203 PIRSF PIRSF000709 1 185 1.4E-16 T 09-03-2017 RG43_RS17885 dc84e6331dbae16287575770056107d9 203 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 09-03-2017 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 RG43_RS17885 dc84e6331dbae16287575770056107d9 203 TIGRFAM TIGR03162 ribazole_cobC: alpha-ribazole phosphatase 3 181 6.5E-61 T 09-03-2017 IPR017578 Alpha-ribazole phosphatase, CobC GO:0009236|GO:0043755 KEGG: 00860+3.1.3.73|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 RG43_RS17885 dc84e6331dbae16287575770056107d9 203 SUPERFAMILY SSF53254 1 195 7.33E-57 T 09-03-2017 IPR029033 Histidine phosphatase superfamily RG43_RS17885 dc84e6331dbae16287575770056107d9 203 Gene3D G3DSA:3.40.50.1240 1 195 4.4E-57 T 09-03-2017 IPR029033 Histidine phosphatase superfamily RG43_RS17885 dc84e6331dbae16287575770056107d9 203 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 194 7.5E-55 T 09-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 RG43_RS21625 77a7c27be2ad0b4068b2807d43a045a2 410 SUPERFAMILY SSF47413 6 59 5.63E-9 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS21625 77a7c27be2ad0b4068b2807d43a045a2 410 Gene3D G3DSA:1.10.260.40 5 58 2.5E-11 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS21625 77a7c27be2ad0b4068b2807d43a045a2 410 Pfam PF01381 Helix-turn-helix 7 59 5.2E-9 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RG43_RS21625 77a7c27be2ad0b4068b2807d43a045a2 410 Gene3D G3DSA:3.40.50.620 63 230 2.9E-52 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS21625 77a7c27be2ad0b4068b2807d43a045a2 410 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 66 136 5.3E-20 T 09-03-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RG43_RS21625 77a7c27be2ad0b4068b2807d43a045a2 410 TIGRFAM TIGR01526 nadR_NMN_Atrans: nicotinamide-nucleotide adenylyltransferase 64 395 2.4E-166 T 09-03-2017 IPR006417 Nicotinamide-nucleotide adenylyltransferase GO:0003677|GO:0006355|GO:0006810|GO:0019363 KEGG: 00760+2.7.7.1+2.7.1.22 RG43_RS21625 77a7c27be2ad0b4068b2807d43a045a2 410 PIRSF PIRSF004776 2 410 4.2E-214 T 09-03-2017 IPR016429 Bifunctional transcriptional regulator NadR GO:0045892 KEGG: 00760+2.7.7.1+2.7.1.22 RG43_RS21625 77a7c27be2ad0b4068b2807d43a045a2 410 Pfam PF13521 AAA domain 234 394 4.3E-31 T 09-03-2017 RG43_RS21625 77a7c27be2ad0b4068b2807d43a045a2 410 SUPERFAMILY SSF52540 232 386 7.49E-27 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS21625 77a7c27be2ad0b4068b2807d43a045a2 410 SUPERFAMILY SSF52374 66 229 1.66E-18 T 09-03-2017 RG43_RS21625 77a7c27be2ad0b4068b2807d43a045a2 410 Gene3D G3DSA:3.40.50.300 231 400 2.4E-65 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS21625 77a7c27be2ad0b4068b2807d43a045a2 410 SMART SM00530 6 62 7.0E-8 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RG43_RS03535 ab3166cceef252444fd02bfe29292bfe 378 PIRSF PIRSF037565 1 374 2.4E-166 T 09-03-2017 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RG43_RS03535 ab3166cceef252444fd02bfe29292bfe 378 Gene3D G3DSA:3.40.50.150 190 373 2.2E-30 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS03535 ab3166cceef252444fd02bfe29292bfe 378 Pfam PF05175 Methyltransferase small domain 199 370 9.9E-59 T 09-03-2017 IPR007848 Methyltransferase small domain GO:0008168 RG43_RS03535 ab3166cceef252444fd02bfe29292bfe 378 SUPERFAMILY SSF53335 192 373 7.17E-29 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS03535 ab3166cceef252444fd02bfe29292bfe 378 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 302 308 - T 09-03-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RG43_RS03535 ab3166cceef252444fd02bfe29292bfe 378 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 1 373 50.572 T 09-03-2017 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RG43_RS23610 f995a4b2b1deaa2b2ef3164261dcedc9 434 Gene3D G3DSA:3.20.20.60 4 417 2.9E-172 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RG43_RS23610 f995a4b2b1deaa2b2ef3164261dcedc9 434 SUPERFAMILY SSF51621 4 417 7.18E-157 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RG43_RS23610 f995a4b2b1deaa2b2ef3164261dcedc9 434 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 256 434 6.2E-94 T 09-03-2017 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 RG43_RS23610 f995a4b2b1deaa2b2ef3164261dcedc9 434 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 8 255 3.7E-124 T 09-03-2017 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 RG43_RS23610 f995a4b2b1deaa2b2ef3164261dcedc9 434 Pfam PF00463 Isocitrate lyase family 8 255 6.0E-61 T 09-03-2017 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 RG43_RS23610 f995a4b2b1deaa2b2ef3164261dcedc9 434 Pfam PF00463 Isocitrate lyase family 256 434 2.0E-49 T 09-03-2017 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 RG43_RS23610 f995a4b2b1deaa2b2ef3164261dcedc9 434 PIRSF PIRSF001362 1 434 6.4E-229 T 09-03-2017 RG43_RS23610 f995a4b2b1deaa2b2ef3164261dcedc9 434 ProSitePatterns PS00161 Isocitrate lyase signature. 193 198 - T 09-03-2017 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 RG43_RS26300 3d9e550d53e8d3211566c7ae8dfcf7af 553 Pfam PF15975 Flotillin 406 530 5.0E-36 T 09-03-2017 IPR031905 Flotillin, C-terminal domain Reactome: R-HSA-8849932 RG43_RS26300 3d9e550d53e8d3211566c7ae8dfcf7af 553 SUPERFAMILY SSF117892 61 202 2.62E-23 T 09-03-2017 IPR001107 Band 7 domain RG43_RS26300 3d9e550d53e8d3211566c7ae8dfcf7af 553 Pfam PF01145 SPFH domain / Band 7 family 40 214 2.9E-18 T 09-03-2017 IPR001107 Band 7 domain RG43_RS26300 3d9e550d53e8d3211566c7ae8dfcf7af 553 SMART SM00244 30 199 1.5E-25 T 09-03-2017 IPR001107 Band 7 domain RG43_RS03925 3d9e550d53e8d3211566c7ae8dfcf7af 553 Pfam PF15975 Flotillin 406 530 5.0E-36 T 09-03-2017 IPR031905 Flotillin, C-terminal domain Reactome: R-HSA-8849932 RG43_RS03925 3d9e550d53e8d3211566c7ae8dfcf7af 553 SUPERFAMILY SSF117892 61 202 2.62E-23 T 09-03-2017 IPR001107 Band 7 domain RG43_RS03925 3d9e550d53e8d3211566c7ae8dfcf7af 553 Pfam PF01145 SPFH domain / Band 7 family 40 214 2.9E-18 T 09-03-2017 IPR001107 Band 7 domain RG43_RS03925 3d9e550d53e8d3211566c7ae8dfcf7af 553 SMART SM00244 30 199 1.5E-25 T 09-03-2017 IPR001107 Band 7 domain RG43_RS02865 47fef0014d264ce132767fe6bef3427f 496 Gene3D G3DSA:1.20.1250.20 17 202 3.9E-32 T 09-03-2017 RG43_RS02865 47fef0014d264ce132767fe6bef3427f 496 Gene3D G3DSA:1.20.1250.20 273 450 4.5E-16 T 09-03-2017 RG43_RS02865 47fef0014d264ce132767fe6bef3427f 496 Pfam PF07690 Major Facilitator Superfamily 26 287 1.3E-24 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS02865 47fef0014d264ce132767fe6bef3427f 496 Hamap MF_01238 Putative sialic acid transporter [nanT]. 1 488 55.901 T 09-03-2017 IPR004742 Sialic acid transporter GO:0015144|GO:0016021|GO:0034219 RG43_RS02865 47fef0014d264ce132767fe6bef3427f 496 SUPERFAMILY SSF103473 267 452 2.75E-62 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS02865 47fef0014d264ce132767fe6bef3427f 496 SUPERFAMILY SSF103473 8 203 2.75E-62 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS02865 47fef0014d264ce132767fe6bef3427f 496 TIGRFAM TIGR00891 2A0112: MFS transporter, sialate:H+ symporter (SHS) family 9 442 1.8E-194 T 09-03-2017 IPR004742 Sialic acid transporter GO:0015144|GO:0016021|GO:0034219 RG43_RS08595 3e535e98acb0b385faad5ed3c59eda59 761 Gene3D G3DSA:3.20.70.20 398 559 8.7E-44 T 09-03-2017 RG43_RS08595 3e535e98acb0b385faad5ed3c59eda59 761 Gene3D G3DSA:3.20.70.20 129 344 8.7E-44 T 09-03-2017 RG43_RS08595 3e535e98acb0b385faad5ed3c59eda59 761 Gene3D G3DSA:3.20.70.20 610 700 8.7E-44 T 09-03-2017 RG43_RS08595 3e535e98acb0b385faad5ed3c59eda59 761 SUPERFAMILY SSF48168 10 221 4.71E-74 T 09-03-2017 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RG43_RS08595 3e535e98acb0b385faad5ed3c59eda59 761 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 731 9.7E-120 T 09-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RG43_RS08595 3e535e98acb0b385faad5ed3c59eda59 761 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 09-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RG43_RS08595 3e535e98acb0b385faad5ed3c59eda59 761 SUPERFAMILY SSF51998 222 740 1.5E-170 T 09-03-2017 RG43_RS08595 3e535e98acb0b385faad5ed3c59eda59 761 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 142 219 2.9E-12 T 09-03-2017 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RG43_RS08595 3e535e98acb0b385faad5ed3c59eda59 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 1.5E-39 T 09-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RG43_RS08595 3e535e98acb0b385faad5ed3c59eda59 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 1.5E-39 T 09-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RG43_RS08595 3e535e98acb0b385faad5ed3c59eda59 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 1.5E-39 T 09-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RG43_RS08595 3e535e98acb0b385faad5ed3c59eda59 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 1.5E-39 T 09-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RG43_RS08595 3e535e98acb0b385faad5ed3c59eda59 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 1.5E-39 T 09-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RG43_RS08595 3e535e98acb0b385faad5ed3c59eda59 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 1.5E-39 T 09-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RG43_RS08595 3e535e98acb0b385faad5ed3c59eda59 761 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 7.2E-181 T 09-03-2017 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RG43_RS08595 3e535e98acb0b385faad5ed3c59eda59 761 Pfam PF03477 ATP cone domain 6 92 2.8E-15 T 09-03-2017 IPR005144 ATP-cone domain Reactome: R-HSA-499943 RG43_RS17460 985cf3fc86bd8f06c9a8a984e71e82ce 263 SUPERFAMILY SSF81624 2 127 3.4E-26 T 09-03-2017 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RG43_RS17460 985cf3fc86bd8f06c9a8a984e71e82ce 263 ProSitePatterns PS01242 Zinc finger FPG-type signature. 238 262 - T 09-03-2017 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 RG43_RS17460 985cf3fc86bd8f06c9a8a984e71e82ce 263 Gene3D G3DSA:1.10.8.50 127 263 1.7E-31 T 09-03-2017 RG43_RS17460 985cf3fc86bd8f06c9a8a984e71e82ce 263 SMART SM01232 126 221 3.2E-16 T 09-03-2017 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 RG43_RS17460 985cf3fc86bd8f06c9a8a984e71e82ce 263 Pfam PF06827 Zinc finger found in FPG and IleRS 235 263 1.0E-7 T 09-03-2017 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 RG43_RS17460 985cf3fc86bd8f06c9a8a984e71e82ce 263 SUPERFAMILY SSF46946 126 214 1.7E-17 T 09-03-2017 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 RG43_RS17460 985cf3fc86bd8f06c9a8a984e71e82ce 263 Hamap MF_01253 Endonuclease 8 [nei]. 1 263 68.961 T 09-03-2017 IPR023713 Endonuclease VIII GO:0003684|GO:0004519|GO:0006284|GO:0008270 RG43_RS17460 985cf3fc86bd8f06c9a8a984e71e82ce 263 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 127 205 1.5E-10 T 09-03-2017 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 RG43_RS17460 985cf3fc86bd8f06c9a8a984e71e82ce 263 SMART SM00898 2 110 4.9E-13 T 09-03-2017 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RG43_RS17460 985cf3fc86bd8f06c9a8a984e71e82ce 263 Gene3D G3DSA:3.20.190.10 2 105 5.3E-17 T 09-03-2017 RG43_RS17460 985cf3fc86bd8f06c9a8a984e71e82ce 263 SUPERFAMILY SSF57716 226 262 3.01E-10 T 09-03-2017 RG43_RS17460 985cf3fc86bd8f06c9a8a984e71e82ce 263 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 104 8.9E-11 T 09-03-2017 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RG43_RS14635 f3f802cd2ac361bd890bbf23282b2e49 356 TIGRFAM TIGR00492 alr: alanine racemase 4 356 7.4E-142 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RG43_RS14635 f3f802cd2ac361bd890bbf23282b2e49 356 Hamap MF_01201 Alanine racemase. 2 356 34.011 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RG43_RS14635 f3f802cd2ac361bd890bbf23282b2e49 356 PRINTS PR00992 Alanine racemase signature 61 79 4.7E-77 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RG43_RS14635 f3f802cd2ac361bd890bbf23282b2e49 356 PRINTS PR00992 Alanine racemase signature 190 217 4.7E-77 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RG43_RS14635 f3f802cd2ac361bd890bbf23282b2e49 356 PRINTS PR00992 Alanine racemase signature 27 43 4.7E-77 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RG43_RS14635 f3f802cd2ac361bd890bbf23282b2e49 356 PRINTS PR00992 Alanine racemase signature 248 263 4.7E-77 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RG43_RS14635 f3f802cd2ac361bd890bbf23282b2e49 356 PRINTS PR00992 Alanine racemase signature 286 303 4.7E-77 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RG43_RS14635 f3f802cd2ac361bd890bbf23282b2e49 356 PRINTS PR00992 Alanine racemase signature 338 351 4.7E-77 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RG43_RS14635 f3f802cd2ac361bd890bbf23282b2e49 356 PRINTS PR00992 Alanine racemase signature 265 280 4.7E-77 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RG43_RS14635 f3f802cd2ac361bd890bbf23282b2e49 356 PRINTS PR00992 Alanine racemase signature 155 166 4.7E-77 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RG43_RS14635 f3f802cd2ac361bd890bbf23282b2e49 356 PRINTS PR00992 Alanine racemase signature 121 133 4.7E-77 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RG43_RS14635 f3f802cd2ac361bd890bbf23282b2e49 356 SUPERFAMILY SSF50621 227 355 1.01E-44 T 09-03-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 RG43_RS14635 f3f802cd2ac361bd890bbf23282b2e49 356 Gene3D G3DSA:2.40.37.10 208 355 8.9E-55 T 09-03-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 RG43_RS14635 f3f802cd2ac361bd890bbf23282b2e49 356 SUPERFAMILY SSF51419 9 233 1.16E-65 T 09-03-2017 IPR029066 PLP-binding barrel RG43_RS14635 f3f802cd2ac361bd890bbf23282b2e49 356 Pfam PF00842 Alanine racemase, C-terminal domain 232 354 4.0E-37 T 09-03-2017 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RG43_RS14635 f3f802cd2ac361bd890bbf23282b2e49 356 Pfam PF01168 Alanine racemase, N-terminal domain 9 217 9.4E-68 T 09-03-2017 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RG43_RS14635 f3f802cd2ac361bd890bbf23282b2e49 356 SMART SM01005 232 356 6.6E-62 T 09-03-2017 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RG43_RS14635 f3f802cd2ac361bd890bbf23282b2e49 356 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 32 42 - T 09-03-2017 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RG43_RS14635 f3f802cd2ac361bd890bbf23282b2e49 356 Gene3D G3DSA:3.20.20.10 11 207 2.1E-68 T 09-03-2017 IPR029066 PLP-binding barrel RG43_RS11975 176860dc1e15267a7b6a14d9eb7a9ac8 87 Hamap MF_01580 Cell division activator CedA [cedA]. 8 87 37.647 T 09-03-2017 IPR019666 Cell division activator CedA GO:0003677|GO:0051301 RG43_RS11975 176860dc1e15267a7b6a14d9eb7a9ac8 87 Pfam PF10729 Cell division activator CedA 10 85 1.6E-45 T 09-03-2017 IPR019666 Cell division activator CedA GO:0003677|GO:0051301 RG43_RS10925 f70aac4527569687127d7913888eeae9 403 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 7 384 4.7E-148 T 09-03-2017 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 RG43_RS10925 f70aac4527569687127d7913888eeae9 403 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 17 33 - T 09-03-2017 IPR013061 Tryptophan/tryrosine permease, conserved site RG43_RS10925 f70aac4527569687127d7913888eeae9 403 Pfam PF03222 Tryptophan/tyrosine permease family 3 390 1.7E-143 T 09-03-2017 IPR018227 Tryptophan/tyrosine permease GO:0003333 RG43_RS10925 f70aac4527569687127d7913888eeae9 403 PRINTS PR00166 Aromatic amino acid permease signature 337 356 2.2E-92 T 09-03-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 RG43_RS10925 f70aac4527569687127d7913888eeae9 403 PRINTS PR00166 Aromatic amino acid permease signature 37 56 2.2E-92 T 09-03-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 RG43_RS10925 f70aac4527569687127d7913888eeae9 403 PRINTS PR00166 Aromatic amino acid permease signature 82 102 2.2E-92 T 09-03-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 RG43_RS10925 f70aac4527569687127d7913888eeae9 403 PRINTS PR00166 Aromatic amino acid permease signature 182 204 2.2E-92 T 09-03-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 RG43_RS10925 f70aac4527569687127d7913888eeae9 403 PRINTS PR00166 Aromatic amino acid permease signature 282 301 2.2E-92 T 09-03-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 RG43_RS10925 f70aac4527569687127d7913888eeae9 403 PRINTS PR00166 Aromatic amino acid permease signature 316 334 2.2E-92 T 09-03-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 RG43_RS10925 f70aac4527569687127d7913888eeae9 403 PRINTS PR00166 Aromatic amino acid permease signature 10 33 2.2E-92 T 09-03-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 RG43_RS10925 f70aac4527569687127d7913888eeae9 403 PRINTS PR00166 Aromatic amino acid permease signature 148 168 2.2E-92 T 09-03-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 RG43_RS10925 f70aac4527569687127d7913888eeae9 403 PRINTS PR00166 Aromatic amino acid permease signature 221 240 2.2E-92 T 09-03-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 RG43_RS07690 a5177ef24ebb6bd31a4182f954e3782b 308 SUPERFAMILY SSF46785 3 113 1.39E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS07690 a5177ef24ebb6bd31a4182f954e3782b 308 Gene3D G3DSA:3.40.190.10 178 261 2.0E-19 T 09-03-2017 RG43_RS07690 a5177ef24ebb6bd31a4182f954e3782b 308 Pfam PF03466 LysR substrate binding domain 89 291 1.8E-46 T 09-03-2017 IPR005119 LysR, substrate-binding RG43_RS07690 a5177ef24ebb6bd31a4182f954e3782b 308 SUPERFAMILY SSF53850 89 296 8.84E-44 T 09-03-2017 RG43_RS07690 a5177ef24ebb6bd31a4182f954e3782b 308 Gene3D G3DSA:3.40.190.10 92 177 1.0E-16 T 09-03-2017 RG43_RS07690 a5177ef24ebb6bd31a4182f954e3782b 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.1E-22 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS07690 a5177ef24ebb6bd31a4182f954e3782b 308 Gene3D G3DSA:1.10.10.10 4 88 6.6E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS07690 a5177ef24ebb6bd31a4182f954e3782b 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 5.1E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS07690 a5177ef24ebb6bd31a4182f954e3782b 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 5.1E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS07690 a5177ef24ebb6bd31a4182f954e3782b 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 5.1E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS21175 ab388741c1c0209f0fcb6a0a52b241bf 523 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 499 1.9E-35 T 09-03-2017 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 RG43_RS21175 ab388741c1c0209f0fcb6a0a52b241bf 523 Gene3D G3DSA:3.20.20.70 1 347 8.4E-142 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS21175 ab388741c1c0209f0fcb6a0a52b241bf 523 SUPERFAMILY SSF110921 391 499 6.8E-26 T 09-03-2017 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 RG43_RS21175 ab388741c1c0209f0fcb6a0a52b241bf 523 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 509 42.699 T 09-03-2017 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 RG43_RS21175 ab388741c1c0209f0fcb6a0a52b241bf 523 SMART SM00917 369 500 4.0E-37 T 09-03-2017 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 RG43_RS21175 ab388741c1c0209f0fcb6a0a52b241bf 523 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 09-03-2017 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 RG43_RS21175 ab388741c1c0209f0fcb6a0a52b241bf 523 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 497 2.6E-260 T 09-03-2017 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 RG43_RS21175 ab388741c1c0209f0fcb6a0a52b241bf 523 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 09-03-2017 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 RG43_RS21175 ab388741c1c0209f0fcb6a0a52b241bf 523 SUPERFAMILY SSF51569 1 290 3.85E-97 T 09-03-2017 RG43_RS21175 ab388741c1c0209f0fcb6a0a52b241bf 523 Pfam PF00682 HMGL-like 4 273 8.1E-106 T 09-03-2017 IPR000891 Pyruvate carboxyltransferase GO:0003824 RG43_RS03605 abce83c97635cec3b8825d63fdb7d3ed 506 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 114 5.9E-11 T 09-03-2017 IPR000014 PAS domain RG43_RS03605 abce83c97635cec3b8825d63fdb7d3ed 506 Gene3D G3DSA:1.10.287.950 274 478 5.8E-53 T 09-03-2017 RG43_RS03605 abce83c97635cec3b8825d63fdb7d3ed 506 SUPERFAMILY SSF58104 233 505 5.1E-61 T 09-03-2017 RG43_RS03605 abce83c97635cec3b8825d63fdb7d3ed 506 Pfam PF00672 HAMP domain 188 246 1.9E-6 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RG43_RS03605 abce83c97635cec3b8825d63fdb7d3ed 506 SUPERFAMILY SSF55785 21 114 6.63E-24 T 09-03-2017 IPR000014 PAS domain RG43_RS03605 abce83c97635cec3b8825d63fdb7d3ed 506 Gene3D G3DSA:3.30.450.20 20 114 6.9E-21 T 09-03-2017 RG43_RS03605 abce83c97635cec3b8825d63fdb7d3ed 506 SMART SM00283 259 506 7.2E-92 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RG43_RS03605 abce83c97635cec3b8825d63fdb7d3ed 506 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 280 309 1.7E-40 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RG43_RS03605 abce83c97635cec3b8825d63fdb7d3ed 506 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 434 463 1.7E-40 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RG43_RS03605 abce83c97635cec3b8825d63fdb7d3ed 506 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 386 415 1.7E-40 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RG43_RS03605 abce83c97635cec3b8825d63fdb7d3ed 506 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 357 384 1.7E-40 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RG43_RS03605 abce83c97635cec3b8825d63fdb7d3ed 506 SMART SM00086 80 121 2.8E-5 T 09-03-2017 IPR001610 PAC motif RG43_RS03605 abce83c97635cec3b8825d63fdb7d3ed 506 Pfam PF08447 PAS fold 31 113 1.3E-15 T 09-03-2017 IPR013655 PAS fold-3 GO:0005515 RG43_RS03605 abce83c97635cec3b8825d63fdb7d3ed 506 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 319 503 2.2E-49 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RG43_RS13895 5a25ed22c04ef317501b0c89e2c6539b 495 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 295 306 - T 09-03-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RG43_RS13895 5a25ed22c04ef317501b0c89e2c6539b 495 SUPERFAMILY SSF53720 6 492 1.83E-162 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RG43_RS13895 5a25ed22c04ef317501b0c89e2c6539b 495 Pfam PF00171 Aldehyde dehydrogenase family 32 489 8.3E-170 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RG43_RS13895 5a25ed22c04ef317501b0c89e2c6539b 495 Gene3D G3DSA:3.40.605.10 19 280 7.5E-97 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RG43_RS13895 5a25ed22c04ef317501b0c89e2c6539b 495 Gene3D G3DSA:3.40.309.10 281 464 2.6E-62 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RG43_RS13895 5a25ed22c04ef317501b0c89e2c6539b 495 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 266 273 - T 09-03-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RG43_RS04375 0ca2284c9dbec6879679e5a8b771ac9f 350 SUPERFAMILY SSF55103 134 346 4.74E-13 T 09-03-2017 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RG43_RS04375 0ca2284c9dbec6879679e5a8b771ac9f 350 SUPERFAMILY SSF56176 12 174 1.59E-30 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RG43_RS04375 0ca2284c9dbec6879679e5a8b771ac9f 350 Gene3D G3DSA:1.10.45.10 324 346 9.4E-5 T 09-03-2017 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RG43_RS04375 0ca2284c9dbec6879679e5a8b771ac9f 350 Gene3D G3DSA:3.30.465.10 53 174 3.0E-21 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RG43_RS04375 0ca2284c9dbec6879679e5a8b771ac9f 350 Pfam PF01565 FAD binding domain 13 136 1.2E-17 T 09-03-2017 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RG43_RS26750 0ca2284c9dbec6879679e5a8b771ac9f 350 SUPERFAMILY SSF55103 134 346 4.74E-13 T 09-03-2017 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RG43_RS26750 0ca2284c9dbec6879679e5a8b771ac9f 350 SUPERFAMILY SSF56176 12 174 1.59E-30 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RG43_RS26750 0ca2284c9dbec6879679e5a8b771ac9f 350 Gene3D G3DSA:1.10.45.10 324 346 9.4E-5 T 09-03-2017 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RG43_RS26750 0ca2284c9dbec6879679e5a8b771ac9f 350 Gene3D G3DSA:3.30.465.10 53 174 3.0E-21 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RG43_RS26750 0ca2284c9dbec6879679e5a8b771ac9f 350 Pfam PF01565 FAD binding domain 13 136 1.2E-17 T 09-03-2017 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RG43_RS00165 ab6f90f28b256ac455299b34f3f49652 415 Pfam PF00072 Response regulator receiver domain 8 117 1.1E-26 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS00165 ab6f90f28b256ac455299b34f3f49652 415 SUPERFAMILY SSF52540 141 339 6.16E-26 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS00165 ab6f90f28b256ac455299b34f3f49652 415 Gene3D G3DSA:1.10.10.60 349 408 6.8E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS00165 ab6f90f28b256ac455299b34f3f49652 415 Gene3D G3DSA:1.10.8.60 285 340 2.6E-13 T 09-03-2017 RG43_RS00165 ab6f90f28b256ac455299b34f3f49652 415 Pfam PF14532 Sigma-54 interaction domain 143 278 1.4E-14 T 09-03-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RG43_RS00165 ab6f90f28b256ac455299b34f3f49652 415 SMART SM00448 6 117 2.1E-27 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS00165 ab6f90f28b256ac455299b34f3f49652 415 SUPERFAMILY SSF46689 343 408 6.81E-11 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS00165 ab6f90f28b256ac455299b34f3f49652 415 Gene3D G3DSA:3.40.50.2300 5 135 4.6E-32 T 09-03-2017 RG43_RS00165 ab6f90f28b256ac455299b34f3f49652 415 Pfam PF02954 Bacterial regulatory protein, Fis family 366 406 1.8E-10 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RG43_RS00165 ab6f90f28b256ac455299b34f3f49652 415 SUPERFAMILY SSF52172 5 185 3.27E-38 T 09-03-2017 IPR011006 CheY-like superfamily RG43_RS00165 ab6f90f28b256ac455299b34f3f49652 415 Gene3D G3DSA:3.40.50.300 141 283 1.4E-18 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS15745 2748c3ad89a8a5e27fc4dabd6075d5c4 109 Pfam PF04358 DsrC like protein 4 109 1.1E-45 T 09-03-2017 IPR007453 Sulphur transfer protein DsrC/TusE RG43_RS15745 2748c3ad89a8a5e27fc4dabd6075d5c4 109 SUPERFAMILY SSF69721 2 109 4.97E-42 T 09-03-2017 IPR025526 DsrC-like domain RG43_RS15745 2748c3ad89a8a5e27fc4dabd6075d5c4 109 PIRSF PIRSF006223 2 109 2.4E-47 T 09-03-2017 IPR007453 Sulphur transfer protein DsrC/TusE RG43_RS15745 2748c3ad89a8a5e27fc4dabd6075d5c4 109 Gene3D G3DSA:1.10.10.370 40 109 1.8E-38 T 09-03-2017 RG43_RS15745 2748c3ad89a8a5e27fc4dabd6075d5c4 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 4 109 6.9E-50 T 09-03-2017 IPR007453 Sulphur transfer protein DsrC/TusE RG43_RS15745 2748c3ad89a8a5e27fc4dabd6075d5c4 109 Gene3D G3DSA:3.30.1420.10 1 39 1.6E-12 T 09-03-2017 RG43_RS02305 a5066d6f3a28de316bd30bc19505fbc0 195 SUPERFAMILY SSF54523 40 176 9.42E-22 T 09-03-2017 RG43_RS02305 a5066d6f3a28de316bd30bc19505fbc0 195 Pfam PF11612 Type II secretion system (T2SS), protein J 58 172 2.8E-7 T 09-03-2017 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 RG43_RS02305 a5066d6f3a28de316bd30bc19505fbc0 195 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS02305 a5066d6f3a28de316bd30bc19505fbc0 195 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 1.0E-7 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS02305 a5066d6f3a28de316bd30bc19505fbc0 195 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 3 26 1.8E-8 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS02305 a5066d6f3a28de316bd30bc19505fbc0 195 Gene3D G3DSA:3.10.610.10 39 131 8.6E-9 T 09-03-2017 RG43_RS07805 ffdb15eded2cbc4a89b6e9ece42b30e9 108 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 6 90 5.7E-27 T 09-03-2017 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 RG43_RS07805 ffdb15eded2cbc4a89b6e9ece42b30e9 108 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 7 98 2.1E-17 T 09-03-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RG43_RS07805 ffdb15eded2cbc4a89b6e9ece42b30e9 108 SUPERFAMILY SSF52794 4 101 1.2E-29 T 09-03-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RG43_RS07805 ffdb15eded2cbc4a89b6e9ece42b30e9 108 Gene3D G3DSA:3.40.50.2300 2 102 8.0E-36 T 09-03-2017 RG43_RS23175 ad2dd21e647641349868a5dd76875465 309 SUPERFAMILY SSF53067 8 301 1.56E-45 T 09-03-2017 RG43_RS23175 ad2dd21e647641349868a5dd76875465 309 Hamap MF_00988 D-allose kinase [alsK]. 1 301 69.594 T 09-03-2017 IPR030883 D-allose kinase GO:0019200|GO:0019316 KEGG: 00051+2.7.1.55 RG43_RS23175 ad2dd21e647641349868a5dd76875465 309 Gene3D G3DSA:3.30.420.40 146 274 1.7E-33 T 09-03-2017 RG43_RS23175 ad2dd21e647641349868a5dd76875465 309 Pfam PF00480 ROK family 9 298 9.6E-95 T 09-03-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 RG43_RS23175 ad2dd21e647641349868a5dd76875465 309 ProSitePatterns PS01125 ROK family signature. 139 166 - T 09-03-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 RG43_RS23175 ad2dd21e647641349868a5dd76875465 309 Gene3D G3DSA:3.30.420.40 2 145 4.7E-23 T 09-03-2017 RG43_RS20755 dea0bbc42e53c8b6fc09c8cdaa60d642 265 SMART SM00382 36 224 4.0E-16 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS20755 dea0bbc42e53c8b6fc09c8cdaa60d642 265 SUPERFAMILY SSF52540 13 238 3.15E-63 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS20755 dea0bbc42e53c8b6fc09c8cdaa60d642 265 Gene3D G3DSA:3.40.50.300 14 240 1.1E-65 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS20755 dea0bbc42e53c8b6fc09c8cdaa60d642 265 Pfam PF00005 ABC transporter 27 176 7.2E-33 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS20755 dea0bbc42e53c8b6fc09c8cdaa60d642 265 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS26710 2725802270c93dd46670545b8645873e 359 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 354 3.7E-93 T 09-03-2017 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 RG43_RS26710 2725802270c93dd46670545b8645873e 359 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 352 4.1E-62 T 09-03-2017 IPR005495 Permease LptG/LptF-related GO:0016021 RG43_RS04335 2725802270c93dd46670545b8645873e 359 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 354 3.7E-93 T 09-03-2017 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 RG43_RS04335 2725802270c93dd46670545b8645873e 359 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 352 4.1E-62 T 09-03-2017 IPR005495 Permease LptG/LptF-related GO:0016021 RG43_RS15100 cdf8527e4138c1721447a37f11f48ad1 309 SUPERFAMILY SSF55048 128 197 2.62E-18 T 09-03-2017 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 RG43_RS15100 cdf8527e4138c1721447a37f11f48ad1 309 PIRSF PIRSF000446 1 309 2.7E-148 T 09-03-2017 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 RG43_RS15100 cdf8527e4138c1721447a37f11f48ad1 309 Gene3D G3DSA:3.40.366.10 3 122 2.4E-72 T 09-03-2017 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 RG43_RS15100 cdf8527e4138c1721447a37f11f48ad1 309 Gene3D G3DSA:3.40.366.10 197 298 2.4E-72 T 09-03-2017 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 RG43_RS15100 cdf8527e4138c1721447a37f11f48ad1 309 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 5.5E-139 T 09-03-2017 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 RG43_RS15100 cdf8527e4138c1721447a37f11f48ad1 309 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 308 1.5E-39 T 09-03-2017 IPR020801 Polyketide synthase, acyl transferase domain RG43_RS15100 cdf8527e4138c1721447a37f11f48ad1 309 SUPERFAMILY SSF52151 4 122 3.4E-82 T 09-03-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RG43_RS15100 cdf8527e4138c1721447a37f11f48ad1 309 SUPERFAMILY SSF52151 190 308 3.4E-82 T 09-03-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RG43_RS15100 cdf8527e4138c1721447a37f11f48ad1 309 Gene3D G3DSA:3.30.70.250 125 196 1.3E-32 T 09-03-2017 RG43_RS15100 cdf8527e4138c1721447a37f11f48ad1 309 Pfam PF00698 Acyl transferase domain 6 283 3.2E-39 T 09-03-2017 IPR014043 Acyl transferase RG43_RS21770 6f78057c07dc425128f9736486460d67 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 165 2.6E-9 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS21770 6f78057c07dc425128f9736486460d67 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 135 149 2.6E-9 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS21770 6f78057c07dc425128f9736486460d67 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 177 2.6E-9 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS21770 6f78057c07dc425128f9736486460d67 207 SMART SM00421 132 189 4.4E-17 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS21770 6f78057c07dc425128f9736486460d67 207 Gene3D G3DSA:1.10.10.10 126 189 1.1E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS21770 6f78057c07dc425128f9736486460d67 207 Pfam PF00196 Bacterial regulatory proteins, luxR family 134 186 1.5E-15 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS21770 6f78057c07dc425128f9736486460d67 207 SUPERFAMILY SSF46894 126 187 6.8E-16 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RG43_RS04860 38cd9db98468edc6048f90c6f8c90e17 1171 Pfam PF13087 AAA domain 776 969 2.5E-23 T 09-03-2017 RG43_RS04860 38cd9db98468edc6048f90c6f8c90e17 1171 SUPERFAMILY SSF52540 791 978 2.73E-37 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS04860 38cd9db98468edc6048f90c6f8c90e17 1171 SUPERFAMILY SSF52540 492 560 2.73E-37 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS04860 38cd9db98468edc6048f90c6f8c90e17 1171 SUPERFAMILY SSF52540 269 347 2.73E-37 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS04860 38cd9db98468edc6048f90c6f8c90e17 1171 SUPERFAMILY SSF52540 636 727 2.73E-37 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS04860 38cd9db98468edc6048f90c6f8c90e17 1171 Gene3D G3DSA:3.40.50.300 791 820 3.8E-28 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS04860 38cd9db98468edc6048f90c6f8c90e17 1171 Gene3D G3DSA:3.40.50.300 264 383 3.8E-28 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS04860 38cd9db98468edc6048f90c6f8c90e17 1171 Gene3D G3DSA:3.40.50.300 690 750 3.8E-28 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS04860 38cd9db98468edc6048f90c6f8c90e17 1171 Pfam PF13086 AAA domain 272 729 1.0E-12 T 09-03-2017 RG43_RS04860 38cd9db98468edc6048f90c6f8c90e17 1171 PIRSF PIRSF026306 1 1171 0.0 T 09-03-2017 IPR016834 Uncharacterised conserved protein UCP026306 RG43_RS04860 38cd9db98468edc6048f90c6f8c90e17 1171 Gene3D G3DSA:3.30.870.10 1010 1165 2.9E-14 T 09-03-2017 RG43_RS04860 38cd9db98468edc6048f90c6f8c90e17 1171 Gene3D G3DSA:3.40.50.300 849 968 1.7E-5 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS04860 38cd9db98468edc6048f90c6f8c90e17 1171 Pfam PF13091 PLD-like domain 1027 1136 8.8E-9 T 09-03-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 RG43_RS04860 38cd9db98468edc6048f90c6f8c90e17 1171 SUPERFAMILY SSF56024 1010 1165 7.22E-14 T 09-03-2017 RG43_RS16785 1151d65d6d6d1d6a438563fd159580e1 429 Gene3D G3DSA:3.40.640.10 62 328 7.4E-93 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS16785 1151d65d6d6d1d6a438563fd159580e1 429 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 13 421 8.3E-185 T 09-03-2017 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 RG43_RS16785 1151d65d6d6d1d6a438563fd159580e1 429 SUPERFAMILY SSF53383 1 422 3.35E-138 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS16785 1151d65d6d6d1d6a438563fd159580e1 429 Gene3D G3DSA:3.90.1150.10 332 423 1.9E-64 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RG43_RS16785 1151d65d6d6d1d6a438563fd159580e1 429 Gene3D G3DSA:3.90.1150.10 1 61 1.9E-64 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RG43_RS16785 1151d65d6d6d1d6a438563fd159580e1 429 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 424 52.166 T 09-03-2017 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 RG43_RS16785 1151d65d6d6d1d6a438563fd159580e1 429 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 242 279 - T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RG43_RS16785 1151d65d6d6d1d6a438563fd159580e1 429 Pfam PF00202 Aminotransferase class-III 27 420 1.6E-132 T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RG43_RS22630 948831e8f4a78a1cae928808f5f90332 813 SUPERFAMILY SSF50249 67 145 8.01E-17 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS22630 948831e8f4a78a1cae928808f5f90332 813 TIGRFAM TIGR02063 RNase_R: ribonuclease R 19 725 1.6E-290 T 09-03-2017 IPR011805 Ribonuclease R GO:0003723|GO:0004518 RG43_RS22630 948831e8f4a78a1cae928808f5f90332 813 Gene3D G3DSA:2.40.50.140 644 734 1.4E-23 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS22630 948831e8f4a78a1cae928808f5f90332 813 SUPERFAMILY SSF50249 644 724 1.5E-22 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS22630 948831e8f4a78a1cae928808f5f90332 813 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 67 725 2.2E-293 T 09-03-2017 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 RG43_RS22630 948831e8f4a78a1cae928808f5f90332 813 SUPERFAMILY SSF50249 221 641 2.86E-144 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS22630 948831e8f4a78a1cae928808f5f90332 813 SUPERFAMILY SSF50249 138 235 1.03E-14 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS22630 948831e8f4a78a1cae928808f5f90332 813 Pfam PF00773 RNB domain 260 587 6.3E-111 T 09-03-2017 RG43_RS22630 948831e8f4a78a1cae928808f5f90332 813 Pfam PF08461 Ribonuclease R winged-helix domain 23 83 3.4E-13 T 09-03-2017 IPR013668 Ribonuclease R winged-helix domain RG43_RS22630 948831e8f4a78a1cae928808f5f90332 813 SMART SM00357 86 145 2.1E-16 T 09-03-2017 IPR011129 Cold shock protein GO:0003676 RG43_RS22630 948831e8f4a78a1cae928808f5f90332 813 Pfam PF00575 S1 RNA binding domain 641 724 2.1E-20 T 09-03-2017 IPR003029 S1 domain GO:0003676 RG43_RS22630 948831e8f4a78a1cae928808f5f90332 813 SMART SM00955 260 588 2.2E-187 T 09-03-2017 RG43_RS22630 948831e8f4a78a1cae928808f5f90332 813 ProSitePatterns PS01175 Ribonuclease II family signature. 555 579 - T 09-03-2017 IPR022966 Ribonuclease II/R, conserved site RG43_RS22630 948831e8f4a78a1cae928808f5f90332 813 SMART SM00316 642 725 5.2E-17 T 09-03-2017 IPR022967 RNA-binding domain, S1 RG43_RS22630 948831e8f4a78a1cae928808f5f90332 813 Pfam PF08206 Ribonuclease B OB domain 87 144 4.2E-22 T 09-03-2017 IPR013223 Ribonuclease B, N-terminal OB domain RG43_RS22630 948831e8f4a78a1cae928808f5f90332 813 Pfam PF08206 Ribonuclease B OB domain 158 213 8.4E-5 T 09-03-2017 IPR013223 Ribonuclease B, N-terminal OB domain RG43_RS22630 948831e8f4a78a1cae928808f5f90332 813 Hamap MF_01895 Ribonuclease R [rnr]. 38 725 58.173 T 09-03-2017 IPR011805 Ribonuclease R GO:0003723|GO:0004518 RG43_RS13610 d0729ad5816d4b6c4021bdaefce3bc4d 108 Pfam PF07027 Protein of unknown function (DUF1318) 18 107 2.2E-31 T 09-03-2017 IPR008309 Uncharacterised conserved protein UCP025560 RG43_RS13610 d0729ad5816d4b6c4021bdaefce3bc4d 108 PIRSF PIRSF025560 1 107 4.6E-44 T 09-03-2017 IPR008309 Uncharacterised conserved protein UCP025560 RG43_RS21765 6696e13bafb1e903828ed5ced43d2afc 262 Pfam PF06276 Ferric iron reductase FhuF-like transporter 93 236 2.3E-29 T 09-03-2017 IPR022770 Ferric iron reductase FhuF domain RG43_RS21765 6696e13bafb1e903828ed5ced43d2afc 262 PRINTS PR01714 Ferric iron reductase signature 125 139 1.1E-75 T 09-03-2017 IPR008090 Ferric iron reductase RG43_RS21765 6696e13bafb1e903828ed5ced43d2afc 262 PRINTS PR01714 Ferric iron reductase signature 173 189 1.1E-75 T 09-03-2017 IPR008090 Ferric iron reductase RG43_RS21765 6696e13bafb1e903828ed5ced43d2afc 262 PRINTS PR01714 Ferric iron reductase signature 93 108 1.1E-75 T 09-03-2017 IPR008090 Ferric iron reductase RG43_RS21765 6696e13bafb1e903828ed5ced43d2afc 262 PRINTS PR01714 Ferric iron reductase signature 215 231 1.1E-75 T 09-03-2017 IPR008090 Ferric iron reductase RG43_RS21765 6696e13bafb1e903828ed5ced43d2afc 262 PRINTS PR01714 Ferric iron reductase signature 241 259 1.1E-75 T 09-03-2017 IPR008090 Ferric iron reductase RG43_RS21765 6696e13bafb1e903828ed5ced43d2afc 262 PRINTS PR01714 Ferric iron reductase signature 16 32 1.1E-75 T 09-03-2017 IPR008090 Ferric iron reductase RG43_RS21765 6696e13bafb1e903828ed5ced43d2afc 262 PRINTS PR01714 Ferric iron reductase signature 197 212 1.1E-75 T 09-03-2017 IPR008090 Ferric iron reductase RG43_RS21765 6696e13bafb1e903828ed5ced43d2afc 262 PRINTS PR01714 Ferric iron reductase signature 56 73 1.1E-75 T 09-03-2017 IPR008090 Ferric iron reductase RG43_RS21765 6696e13bafb1e903828ed5ced43d2afc 262 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 241 261 2.7E-7 T 09-03-2017 IPR024726 Ferric iron reductase, C-terminal GO:0051537 RG43_RS21765 6696e13bafb1e903828ed5ced43d2afc 262 TIGRFAM TIGR03951 Fe_III_red_FhuF: siderophore-iron reductase FhuF 87 262 4.4E-69 T 09-03-2017 IPR008090 Ferric iron reductase RG43_RS06525 88dafdd2f1e6b9926ee59fd6763d3056 109 Pfam PF05957 Bacterial protein of unknown function (DUF883) 16 107 6.4E-26 T 09-03-2017 IPR010279 Protein of unknown function DUF883, ElaB RG43_RS19015 4560b33d0115f26b549d354a2b8480d4 394 SUPERFAMILY SSF103473 3 383 2.62E-49 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS19015 4560b33d0115f26b549d354a2b8480d4 394 Pfam PF07690 Major Facilitator Superfamily 8 327 1.6E-36 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS19015 4560b33d0115f26b549d354a2b8480d4 394 Gene3D G3DSA:1.20.1250.20 3 188 8.7E-25 T 09-03-2017 RG43_RS19015 4560b33d0115f26b549d354a2b8480d4 394 Gene3D G3DSA:1.20.1250.20 191 383 7.9E-13 T 09-03-2017 RG43_RS20670 c168653e3c8d2bb35f52032fea2ce506 264 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 250 1.8E-114 T 09-03-2017 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 RG43_RS20670 c168653e3c8d2bb35f52032fea2ce506 264 Pfam PF00557 Metallopeptidase family M24 12 242 6.1E-54 T 09-03-2017 IPR000994 Peptidase M24, structural domain RG43_RS20670 c168653e3c8d2bb35f52032fea2ce506 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 193 205 6.1E-24 T 09-03-2017 IPR001714 Peptidase M24, methionine aminopeptidase RG43_RS20670 c168653e3c8d2bb35f52032fea2ce506 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 162 174 6.1E-24 T 09-03-2017 IPR001714 Peptidase M24, methionine aminopeptidase RG43_RS20670 c168653e3c8d2bb35f52032fea2ce506 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 92 108 6.1E-24 T 09-03-2017 IPR001714 Peptidase M24, methionine aminopeptidase RG43_RS20670 c168653e3c8d2bb35f52032fea2ce506 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 6.1E-24 T 09-03-2017 IPR001714 Peptidase M24, methionine aminopeptidase RG43_RS20670 c168653e3c8d2bb35f52032fea2ce506 264 Hamap MF_01974 Methionine aminopeptidase [map]. 3 251 44.081 T 09-03-2017 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 RG43_RS20670 c168653e3c8d2bb35f52032fea2ce506 264 SUPERFAMILY SSF55920 3 255 4.32E-93 T 09-03-2017 IPR000994 Peptidase M24, structural domain RG43_RS20670 c168653e3c8d2bb35f52032fea2ce506 264 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 168 186 - T 09-03-2017 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 RG43_RS20670 c168653e3c8d2bb35f52032fea2ce506 264 Gene3D G3DSA:3.90.230.10 3 259 1.5E-102 T 09-03-2017 IPR000994 Peptidase M24, structural domain RG43_RS19075 8fe5dd1a25c01fd563326ce903bfc11d 366 Pfam PF00990 Diguanylate cyclase, GGDEF domain 206 361 4.4E-47 T 09-03-2017 IPR000160 GGDEF domain RG43_RS19075 8fe5dd1a25c01fd563326ce903bfc11d 366 SMART SM00267 194 365 1.0E-66 T 09-03-2017 IPR000160 GGDEF domain RG43_RS19075 8fe5dd1a25c01fd563326ce903bfc11d 366 SUPERFAMILY SSF55073 210 363 4.32E-44 T 09-03-2017 IPR029787 Nucleotide cyclase RG43_RS19075 8fe5dd1a25c01fd563326ce903bfc11d 366 Gene3D G3DSA:3.30.70.270 207 364 1.8E-46 T 09-03-2017 RG43_RS19075 8fe5dd1a25c01fd563326ce903bfc11d 366 Pfam PF05230 MASE2 domain 35 123 2.1E-28 T 09-03-2017 IPR007894 MASE2 RG43_RS19075 8fe5dd1a25c01fd563326ce903bfc11d 366 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 201 365 4.9E-66 T 09-03-2017 IPR000160 GGDEF domain RG43_RS25460 5eedc69dcc8a494aac3431061697c90c 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 2.6E-262 T 09-03-2017 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 RG43_RS25460 5eedc69dcc8a494aac3431061697c90c 513 SUPERFAMILY SSF47917 383 511 4.19E-46 T 09-03-2017 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RG43_RS25460 5eedc69dcc8a494aac3431061697c90c 513 SUPERFAMILY SSF50615 10 94 2.55E-25 T 09-03-2017 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RG43_RS25460 5eedc69dcc8a494aac3431061697c90c 513 Gene3D G3DSA:3.40.50.300 94 382 1.4E-113 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25460 5eedc69dcc8a494aac3431061697c90c 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 4.4E-74 T 09-03-2017 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RG43_RS25460 5eedc69dcc8a494aac3431061697c90c 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 1.1E-45 T 09-03-2017 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RG43_RS25460 5eedc69dcc8a494aac3431061697c90c 513 Gene3D G3DSA:1.20.150.20 383 510 3.6E-49 T 09-03-2017 RG43_RS25460 5eedc69dcc8a494aac3431061697c90c 513 Gene3D G3DSA:2.40.30.20 1 93 3.5E-29 T 09-03-2017 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 RG43_RS25460 5eedc69dcc8a494aac3431061697c90c 513 SUPERFAMILY SSF52540 96 381 9.43E-95 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25460 5eedc69dcc8a494aac3431061697c90c 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 49.882 T 09-03-2017 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 RG43_RS25460 5eedc69dcc8a494aac3431061697c90c 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 92 1.6E-12 T 09-03-2017 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RG43_RS25460 5eedc69dcc8a494aac3431061697c90c 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 09-03-2017 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RG43_RS19385 31509816d8ca70dd2a548ae9cec8af84 494 Pfam PF00005 ABC transporter 20 169 7.9E-28 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS19385 31509816d8ca70dd2a548ae9cec8af84 494 Pfam PF00005 ABC transporter 269 424 8.6E-22 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS19385 31509816d8ca70dd2a548ae9cec8af84 494 SUPERFAMILY SSF52540 4 229 2.61E-54 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS19385 31509816d8ca70dd2a548ae9cec8af84 494 ProSitePatterns PS00211 ABC transporters family signature. 397 411 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS19385 31509816d8ca70dd2a548ae9cec8af84 494 SMART SM00382 29 217 1.0E-7 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS19385 31509816d8ca70dd2a548ae9cec8af84 494 SMART SM00382 278 475 0.49 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS19385 31509816d8ca70dd2a548ae9cec8af84 494 Gene3D G3DSA:3.40.50.300 2 232 5.2E-60 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS19385 31509816d8ca70dd2a548ae9cec8af84 494 Gene3D G3DSA:3.40.50.300 255 480 1.2E-47 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS19385 31509816d8ca70dd2a548ae9cec8af84 494 SUPERFAMILY SSF52540 256 478 2.05E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS15095 47ff75cda4b7131bc89ecc3242f1ff56 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 1.4E-102 T 09-03-2017 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 RG43_RS15095 47ff75cda4b7131bc89ecc3242f1ff56 244 Gene3D G3DSA:3.40.50.720 2 243 8.2E-90 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS15095 47ff75cda4b7131bc89ecc3242f1ff56 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 187 1.3E-5 T 09-03-2017 RG43_RS15095 47ff75cda4b7131bc89ecc3242f1ff56 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 2.0E-68 T 09-03-2017 RG43_RS15095 47ff75cda4b7131bc89ecc3242f1ff56 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 3.2E-15 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS15095 47ff75cda4b7131bc89ecc3242f1ff56 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 3.2E-15 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS15095 47ff75cda4b7131bc89ecc3242f1ff56 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 3.2E-15 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS15095 47ff75cda4b7131bc89ecc3242f1ff56 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 2.1E-50 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS15095 47ff75cda4b7131bc89ecc3242f1ff56 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 2.1E-50 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS15095 47ff75cda4b7131bc89ecc3242f1ff56 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 2.1E-50 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS15095 47ff75cda4b7131bc89ecc3242f1ff56 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.1E-50 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS15095 47ff75cda4b7131bc89ecc3242f1ff56 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 2.1E-50 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS15095 47ff75cda4b7131bc89ecc3242f1ff56 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 2.1E-50 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS15095 47ff75cda4b7131bc89ecc3242f1ff56 244 SUPERFAMILY SSF51735 4 243 1.17E-87 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS15095 47ff75cda4b7131bc89ecc3242f1ff56 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RG43_RS20785 5492ee991adc2f4a849470a45e6b2141 151 PRINTS PR00618 DksA/TraR zinc finger signature 126 138 9.9E-5 T 09-03-2017 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria RG43_RS20785 5492ee991adc2f4a849470a45e6b2141 151 PRINTS PR00618 DksA/TraR zinc finger signature 114 125 9.9E-5 T 09-03-2017 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria RG43_RS20785 5492ee991adc2f4a849470a45e6b2141 151 SUPERFAMILY SSF109635 9 109 1.07E-37 T 09-03-2017 RG43_RS20785 5492ee991adc2f4a849470a45e6b2141 151 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 110 143 3.0E-10 T 09-03-2017 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 RG43_RS20785 5492ee991adc2f4a849470a45e6b2141 151 SUPERFAMILY SSF57716 111 149 4.56E-10 T 09-03-2017 RG43_RS20785 5492ee991adc2f4a849470a45e6b2141 151 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 32 140 1.7E-51 T 09-03-2017 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 RG43_RS20785 5492ee991adc2f4a849470a45e6b2141 151 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 114 138 - T 09-03-2017 IPR020458 Zinc finger, DksA/TraR C4-type conserved site RG43_RS20785 5492ee991adc2f4a849470a45e6b2141 151 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 28 150 30.333 T 09-03-2017 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 RG43_RS16490 8f2c0e969a3442bc2d0be6389cddf5fc 411 Pfam PF00994 Probable molybdopterin binding domain 182 317 1.7E-27 T 09-03-2017 IPR001453 MoaB/Mog domain RG43_RS16490 8f2c0e969a3442bc2d0be6389cddf5fc 411 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 254 287 - T 09-03-2017 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 RG43_RS16490 8f2c0e969a3442bc2d0be6389cddf5fc 411 SUPERFAMILY SSF63867 328 407 1.09E-25 T 09-03-2017 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 RG43_RS16490 8f2c0e969a3442bc2d0be6389cddf5fc 411 Gene3D G3DSA:3.90.105.10 143 163 1.7E-25 T 09-03-2017 RG43_RS16490 8f2c0e969a3442bc2d0be6389cddf5fc 411 Gene3D G3DSA:3.90.105.10 27 50 1.7E-25 T 09-03-2017 RG43_RS16490 8f2c0e969a3442bc2d0be6389cddf5fc 411 Pfam PF03454 MoeA C-terminal region (domain IV) 332 404 7.8E-22 T 09-03-2017 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 RG43_RS16490 8f2c0e969a3442bc2d0be6389cddf5fc 411 SUPERFAMILY SSF63882 7 177 3.66E-59 T 09-03-2017 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 RG43_RS16490 8f2c0e969a3442bc2d0be6389cddf5fc 411 SMART SM00852 181 318 4.9E-44 T 09-03-2017 IPR001453 MoaB/Mog domain RG43_RS16490 8f2c0e969a3442bc2d0be6389cddf5fc 411 Gene3D G3DSA:2.40.340.10 330 402 8.7E-36 T 09-03-2017 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 RG43_RS16490 8f2c0e969a3442bc2d0be6389cddf5fc 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 177 314 3.6E-34 T 09-03-2017 IPR001453 MoaB/Mog domain RG43_RS16490 8f2c0e969a3442bc2d0be6389cddf5fc 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 9 168 4.4E-40 T 09-03-2017 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 RG43_RS16490 8f2c0e969a3442bc2d0be6389cddf5fc 411 Gene3D G3DSA:2.170.190.11 51 142 1.9E-35 T 09-03-2017 RG43_RS16490 8f2c0e969a3442bc2d0be6389cddf5fc 411 SUPERFAMILY SSF53218 178 321 7.85E-44 T 09-03-2017 IPR001453 MoaB/Mog domain RG43_RS16490 8f2c0e969a3442bc2d0be6389cddf5fc 411 Gene3D G3DSA:3.40.980.10 164 327 8.8E-65 T 09-03-2017 IPR001453 MoaB/Mog domain RG43_RS00010 28a3e63759f22ff92ca416dd1e880813 159 Gene3D G3DSA:1.10.1710.10 22 158 1.4E-50 T 09-03-2017 IPR016103 ProQ/FinO domain RG43_RS00010 28a3e63759f22ff92ca416dd1e880813 159 SMART SM00945 48 158 1.3E-17 T 09-03-2017 IPR016103 ProQ/FinO domain RG43_RS00010 28a3e63759f22ff92ca416dd1e880813 159 SUPERFAMILY SSF48657 40 152 6.28E-33 T 09-03-2017 IPR016103 ProQ/FinO domain RG43_RS00010 28a3e63759f22ff92ca416dd1e880813 159 Pfam PF04352 ProQ/FINO family 53 157 6.7E-25 T 09-03-2017 IPR016103 ProQ/FinO domain RG43_RS06000 6ee46588d4ff83a521b251dbaeb15acf 191 Pfam PF04309 Glycerol-3-phosphate responsive antiterminator 12 184 8.5E-63 T 09-03-2017 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 RG43_RS06000 6ee46588d4ff83a521b251dbaeb15acf 191 SUPERFAMILY SSF110391 11 185 4.71E-56 T 09-03-2017 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 RG43_RS06000 6ee46588d4ff83a521b251dbaeb15acf 191 PIRSF PIRSF016897 1 190 1.1E-68 T 09-03-2017 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 RG43_RS06000 6ee46588d4ff83a521b251dbaeb15acf 191 Gene3D G3DSA:3.20.20.400 3 186 9.1E-69 T 09-03-2017 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 RG43_RS11915 40c08047e7cc296cd195ac5d49f15304 295 SMART SM00465 34 112 9.3E-16 T 09-03-2017 IPR000305 GIY-YIG nuclease superfamily RG43_RS11915 40c08047e7cc296cd195ac5d49f15304 295 SUPERFAMILY SSF82771 34 111 1.44E-10 T 09-03-2017 IPR000305 GIY-YIG nuclease superfamily RG43_RS26065 beb7df76afaebee7fb3eb0692ad37389 69 Pfam PF05321 Haemolysin expression modulating protein 10 66 4.9E-26 T 09-03-2017 IPR007985 Haemolysin expression modulating, HHA RG43_RS26065 beb7df76afaebee7fb3eb0692ad37389 69 SUPERFAMILY SSF68989 3 69 6.02E-30 T 09-03-2017 IPR007985 Haemolysin expression modulating, HHA RG43_RS26065 beb7df76afaebee7fb3eb0692ad37389 69 Gene3D G3DSA:1.20.1280.40 2 69 2.2E-35 T 09-03-2017 IPR007985 Haemolysin expression modulating, HHA RG43_RS00955 471584d9c7353455396691e5d4ea6e0a 50 Pfam PF01848 Hok/gef family 5 46 3.4E-23 T 09-03-2017 IPR000021 Hok/gef cell toxic protein GO:0016020 RG43_RS00955 471584d9c7353455396691e5d4ea6e0a 50 ProSitePatterns PS00556 Hok/gef family cell toxic proteins signature. 10 29 - T 09-03-2017 IPR018084 Hok/gef cell toxic protein, conserved site GO:0016020 RG43_RS00955 471584d9c7353455396691e5d4ea6e0a 50 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 1 46 2.0E-20 T 09-03-2017 IPR000021 Hok/gef cell toxic protein GO:0016020 RG43_RS00955 471584d9c7353455396691e5d4ea6e0a 50 PRINTS PR00281 Hok/Gef cell toxic protein family signature 5 23 4.5E-14 T 09-03-2017 IPR000021 Hok/gef cell toxic protein GO:0016020 RG43_RS00955 471584d9c7353455396691e5d4ea6e0a 50 PRINTS PR00281 Hok/Gef cell toxic protein family signature 25 47 4.5E-14 T 09-03-2017 IPR000021 Hok/gef cell toxic protein GO:0016020 RG43_RS26680 0c8481574f87ffa2834c7efab6d5582d 237 SUPERFAMILY SSF52540 14 127 1.18E-9 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS26680 0c8481574f87ffa2834c7efab6d5582d 237 Gene3D G3DSA:3.40.50.300 13 235 1.7E-13 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS04305 0c8481574f87ffa2834c7efab6d5582d 237 SUPERFAMILY SSF52540 14 127 1.18E-9 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS04305 0c8481574f87ffa2834c7efab6d5582d 237 Gene3D G3DSA:3.40.50.300 13 235 1.7E-13 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS09010 cc3e6fb6928dbf30678f50efdfaf37a0 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 2.3E-15 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS09010 cc3e6fb6928dbf30678f50efdfaf37a0 293 Pfam PF03466 LysR substrate binding domain 86 286 1.0E-53 T 09-03-2017 IPR005119 LysR, substrate-binding RG43_RS09010 cc3e6fb6928dbf30678f50efdfaf37a0 293 Gene3D G3DSA:1.10.10.10 2 82 5.2E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS09010 cc3e6fb6928dbf30678f50efdfaf37a0 293 Gene3D G3DSA:3.40.190.10 87 173 2.3E-18 T 09-03-2017 RG43_RS09010 cc3e6fb6928dbf30678f50efdfaf37a0 293 Gene3D G3DSA:3.40.190.10 174 254 1.0E-19 T 09-03-2017 RG43_RS09010 cc3e6fb6928dbf30678f50efdfaf37a0 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.2E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS09010 cc3e6fb6928dbf30678f50efdfaf37a0 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.2E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS09010 cc3e6fb6928dbf30678f50efdfaf37a0 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.2E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS09010 cc3e6fb6928dbf30678f50efdfaf37a0 293 SUPERFAMILY SSF53850 88 286 1.18E-49 T 09-03-2017 RG43_RS09010 cc3e6fb6928dbf30678f50efdfaf37a0 293 SUPERFAMILY SSF46785 2 109 2.18E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS19535 d47b5dadc29fbc47ec2a346d86bf760a 284 Pfam PF12852 Cupin 2 162 6.0E-19 T 09-03-2017 IPR032783 AraC-type transcription regulator, ligand-binding domain RG43_RS19535 d47b5dadc29fbc47ec2a346d86bf760a 284 SMART SM00342 193 276 1.0E-28 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS19535 d47b5dadc29fbc47ec2a346d86bf760a 284 Pfam PF12833 Helix-turn-helix domain 199 278 4.1E-20 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS19535 d47b5dadc29fbc47ec2a346d86bf760a 284 Gene3D G3DSA:1.10.10.60 176 230 4.0E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS19535 d47b5dadc29fbc47ec2a346d86bf760a 284 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 260 276 6.8E-6 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RG43_RS19535 d47b5dadc29fbc47ec2a346d86bf760a 284 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 260 6.8E-6 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RG43_RS19535 d47b5dadc29fbc47ec2a346d86bf760a 284 SUPERFAMILY SSF46689 229 280 4.48E-11 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS19535 d47b5dadc29fbc47ec2a346d86bf760a 284 Gene3D G3DSA:1.10.10.60 231 279 6.3E-15 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS19535 d47b5dadc29fbc47ec2a346d86bf760a 284 SUPERFAMILY SSF46689 176 224 1.28E-6 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS19535 d47b5dadc29fbc47ec2a346d86bf760a 284 Gene3D G3DSA:2.60.120.10 41 88 3.0E-7 T 09-03-2017 IPR014710 RmlC-like jelly roll fold RG43_RS19535 d47b5dadc29fbc47ec2a346d86bf760a 284 SUPERFAMILY SSF51182 43 97 5.27E-5 T 09-03-2017 IPR011051 RmlC-like cupin domain RG43_RS25805 5f57b148b10720bb4684c11c1898535f 562 SUPERFAMILY SSF52518 10 185 1.39E-59 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS25805 5f57b148b10720bb4684c11c1898535f 562 Gene3D G3DSA:3.40.50.970 362 560 2.7E-71 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS25805 5f57b148b10720bb4684c11c1898535f 562 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 14 178 3.6E-58 T 09-03-2017 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 RG43_RS25805 5f57b148b10720bb4684c11c1898535f 562 SUPERFAMILY SSF52518 366 560 1.91E-66 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS25805 5f57b148b10720bb4684c11c1898535f 562 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 390 538 2.0E-48 T 09-03-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RG43_RS25805 5f57b148b10720bb4684c11c1898535f 562 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 201 334 1.7E-44 T 09-03-2017 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 RG43_RS25805 5f57b148b10720bb4684c11c1898535f 562 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 427 446 - T 09-03-2017 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 RG43_RS25805 5f57b148b10720bb4684c11c1898535f 562 Gene3D G3DSA:3.40.50.1220 196 358 3.0E-62 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain RG43_RS25805 5f57b148b10720bb4684c11c1898535f 562 SUPERFAMILY SSF52467 165 361 6.2E-57 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain RG43_RS25805 5f57b148b10720bb4684c11c1898535f 562 Gene3D G3DSA:3.40.50.970 12 185 1.1E-72 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS25805 5f57b148b10720bb4684c11c1898535f 562 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 14 561 3.8E-202 T 09-03-2017 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 RG43_RS16770 14fb0bacbccf24e3e03a56a88c99e446 251 SUPERFAMILY SSF53335 10 198 5.63E-42 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS16770 14fb0bacbccf24e3e03a56a88c99e446 251 Pfam PF08241 Methyltransferase domain 47 138 2.1E-24 T 09-03-2017 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 RG43_RS16770 14fb0bacbccf24e3e03a56a88c99e446 251 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 4 250 31.614 T 09-03-2017 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519 RG43_RS16770 14fb0bacbccf24e3e03a56a88c99e446 251 Gene3D G3DSA:3.40.50.150 10 201 3.7E-40 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS16770 14fb0bacbccf24e3e03a56a88c99e446 251 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 12 249 3.3E-77 T 09-03-2017 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519 RG43_RS21730 1b25f0ccaf87741acce43da3e1674ddb 137 PIRSF PIRSF029225 2 131 2.6E-49 T 09-03-2017 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS21730 1b25f0ccaf87741acce43da3e1674ddb 137 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 34 125 8.0E-46 T 09-03-2017 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS21730 1b25f0ccaf87741acce43da3e1674ddb 137 Pfam PF03603 DNA polymerase III psi subunit 3 127 1.4E-43 T 09-03-2017 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS21730 1b25f0ccaf87741acce43da3e1674ddb 137 SUPERFAMILY SSF102220 27 135 6.41E-34 T 09-03-2017 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS21730 1b25f0ccaf87741acce43da3e1674ddb 137 Gene3D G3DSA:3.40.50.10220 26 136 2.2E-44 T 09-03-2017 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS21730 1b25f0ccaf87741acce43da3e1674ddb 137 TIGRFAM TIGR00664 DNA_III_psi: DNA polymerase III, psi subunit 1 125 6.3E-62 T 09-03-2017 IPR018382 DNA polymerase III, psi subunit, subgroup GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS18625 a7c2dce10c2ff34d22b8aa674aa75c8c 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 23.604 T 09-03-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family RG43_RS18625 a7c2dce10c2ff34d22b8aa674aa75c8c 109 Gene3D G3DSA:3.30.1310.10 1 109 1.2E-51 T 09-03-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family RG43_RS18625 a7c2dce10c2ff34d22b8aa674aa75c8c 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 99 1.7E-35 T 09-03-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family RG43_RS18625 a7c2dce10c2ff34d22b8aa674aa75c8c 109 PIRSF PIRSF004555 3 109 1.5E-39 T 09-03-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family RG43_RS18625 a7c2dce10c2ff34d22b8aa674aa75c8c 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 1.3E-42 T 09-03-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family RG43_RS18625 a7c2dce10c2ff34d22b8aa674aa75c8c 109 SUPERFAMILY SSF82607 11 103 1.44E-36 T 09-03-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family RG43_RS19070 ad28a8bffcd43132168d795293745983 269 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 3 266 27.237 T 09-03-2017 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 RG43_RS19070 ad28a8bffcd43132168d795293745983 269 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 266 2.7E-38 T 09-03-2017 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 RG43_RS19070 ad28a8bffcd43132168d795293745983 269 PIRSF PIRSF000193 2 269 5.8E-100 T 09-03-2017 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 RG43_RS19070 ad28a8bffcd43132168d795293745983 269 SUPERFAMILY SSF51735 3 159 7.04E-39 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS19070 ad28a8bffcd43132168d795293745983 269 Gene3D G3DSA:1.10.3730.10 162 266 1.2E-42 T 09-03-2017 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 RG43_RS19070 ad28a8bffcd43132168d795293745983 269 Gene3D G3DSA:3.40.50.720 1 159 1.6E-51 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS19070 ad28a8bffcd43132168d795293745983 269 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 5 266 4.4E-93 T 09-03-2017 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 RG43_RS19070 ad28a8bffcd43132168d795293745983 269 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 222 244 - T 09-03-2017 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 RG43_RS19070 ad28a8bffcd43132168d795293745983 269 SUPERFAMILY SSF48179 162 268 3.74E-37 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RG43_RS19070 ad28a8bffcd43132168d795293745983 269 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 4 99 1.5E-24 T 09-03-2017 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal RG43_RS23420 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 Pfam PF01726 LexA DNA binding domain 1 65 1.3E-31 T 09-03-2017 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 RG43_RS23420 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 Hamap MF_00015 LexA repressor [lexA]. 3 199 32.817 T 09-03-2017 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 RG43_RS23420 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 SUPERFAMILY SSF51306 76 198 1.27E-38 T 09-03-2017 IPR015927 Peptidase S24/S26A/S26B/S26C RG43_RS23420 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 Gene3D G3DSA:1.10.10.10 1 69 7.0E-30 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS23420 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 TIGRFAM TIGR00498 lexA: repressor LexA 1 199 3.2E-87 T 09-03-2017 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 RG43_RS23420 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 Gene3D G3DSA:2.10.109.10 76 198 2.8E-47 T 09-03-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain RG43_RS23420 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 122 133 2.4E-14 T 09-03-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 RG43_RS23420 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 111 121 2.4E-14 T 09-03-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 RG43_RS23420 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 150 162 2.4E-14 T 09-03-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 RG43_RS23420 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 SUPERFAMILY SSF46785 3 70 6.28E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS23420 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 Pfam PF00717 Peptidase S24-like 114 180 6.4E-16 T 09-03-2017 IPR019759 Peptidase S24/S26A/S26B RG43_RS02175 d96b7e35e3d96f59c5fb9bfa13343bdb 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 2.5E-29 T 09-03-2017 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 RG43_RS02175 d96b7e35e3d96f59c5fb9bfa13343bdb 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 2.5E-29 T 09-03-2017 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 RG43_RS02175 d96b7e35e3d96f59c5fb9bfa13343bdb 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 2.5E-29 T 09-03-2017 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 RG43_RS02175 d96b7e35e3d96f59c5fb9bfa13343bdb 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 2.5E-29 T 09-03-2017 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 RG43_RS02175 d96b7e35e3d96f59c5fb9bfa13343bdb 289 Gene3D G3DSA:3.40.50.300 1 288 1.1E-128 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS02175 d96b7e35e3d96f59c5fb9bfa13343bdb 289 ProSitePatterns PS00567 Phosphoribulokinase signature. 164 177 - T 09-03-2017 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 RG43_RS02175 d96b7e35e3d96f59c5fb9bfa13343bdb 289 SUPERFAMILY SSF52540 4 286 1.84E-46 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS02175 d96b7e35e3d96f59c5fb9bfa13343bdb 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 2.1E-78 T 09-03-2017 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 RG43_RS18150 c36ead89811b9a85a429ebb069c731ff 377 Gene3D G3DSA:1.10.287.210 215 317 7.6E-46 T 09-03-2017 RG43_RS18150 c36ead89811b9a85a429ebb069c731ff 377 Gene3D G3DSA:3.30.1890.10 52 214 5.9E-68 T 09-03-2017 RG43_RS18150 c36ead89811b9a85a429ebb069c731ff 377 SUPERFAMILY SSF160355 64 330 3.92E-83 T 09-03-2017 RG43_RS18150 c36ead89811b9a85a429ebb069c731ff 377 Pfam PF02706 Chain length determinant protein 25 173 1.7E-24 T 09-03-2017 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 RG43_RS06705 aaee4f8c34c18c2a5461a40785d492d5 373 Gene3D G3DSA:1.20.59.10 3 83 2.0E-22 T 09-03-2017 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 RG43_RS06705 aaee4f8c34c18c2a5461a40785d492d5 373 SMART SM00830 9 89 2.9E-30 T 09-03-2017 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 RG43_RS06705 aaee4f8c34c18c2a5461a40785d492d5 373 Pfam PF02153 Prephenate dehydrogenase 137 344 2.8E-31 T 09-03-2017 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 RG43_RS06705 aaee4f8c34c18c2a5461a40785d492d5 373 SUPERFAMILY SSF51735 91 238 1.5E-38 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS06705 aaee4f8c34c18c2a5461a40785d492d5 373 Gene3D G3DSA:1.10.3660.10 248 372 1.4E-58 T 09-03-2017 RG43_RS06705 aaee4f8c34c18c2a5461a40785d492d5 373 Gene3D G3DSA:3.40.50.720 84 247 8.8E-48 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS06705 aaee4f8c34c18c2a5461a40785d492d5 373 SUPERFAMILY SSF48600 4 88 4.03E-23 T 09-03-2017 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 RG43_RS06705 aaee4f8c34c18c2a5461a40785d492d5 373 Pfam PF01817 Chorismate mutase type II 9 86 1.3E-19 T 09-03-2017 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 RG43_RS06705 aaee4f8c34c18c2a5461a40785d492d5 373 SUPERFAMILY SSF48179 241 366 2.04E-42 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RG43_RS06705 aaee4f8c34c18c2a5461a40785d492d5 373 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 2.3E-46 T 09-03-2017 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 RG43_RS06705 aaee4f8c34c18c2a5461a40785d492d5 373 PIRSF PIRSF001499 1 373 4.2E-187 T 09-03-2017 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 RG43_RS01515 52bd292fb0653445c2d0a437acd359a3 195 SUPERFAMILY SSF56214 87 180 5.89E-17 T 09-03-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 RG43_RS01515 52bd292fb0653445c2d0a437acd359a3 195 SUPERFAMILY SSF56214 29 79 4.29E-10 T 09-03-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 RG43_RS01515 52bd292fb0653445c2d0a437acd359a3 195 Gene3D G3DSA:3.90.470.20 100 145 4.5E-15 T 09-03-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 RG43_RS01515 52bd292fb0653445c2d0a437acd359a3 195 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 88 171 2.1E-9 T 09-03-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 RG43_RS01515 52bd292fb0653445c2d0a437acd359a3 195 Gene3D G3DSA:3.90.470.20 31 99 1.4E-13 T 09-03-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 RG43_RS10205 4c8a7249d5746dd0b88cc15e84f20d91 426 SUPERFAMILY SSF103473 4 414 2.75E-26 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS10205 4c8a7249d5746dd0b88cc15e84f20d91 426 Gene3D G3DSA:1.20.1250.20 229 414 2.1E-10 T 09-03-2017 RG43_RS10205 4c8a7249d5746dd0b88cc15e84f20d91 426 Pfam PF07690 Major Facilitator Superfamily 25 365 1.0E-9 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS15780 0b784f1e718cda3780049f188bca61c1 152 Pfam PF02142 MGS-like domain 26 118 2.7E-18 T 09-03-2017 IPR011607 Methylglyoxal synthase-like domain RG43_RS15780 0b784f1e718cda3780049f188bca61c1 152 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 41.132 T 09-03-2017 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 RG43_RS15780 0b784f1e718cda3780049f188bca61c1 152 PIRSF PIRSF006614 8 151 5.2E-66 T 09-03-2017 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 RG43_RS15780 0b784f1e718cda3780049f188bca61c1 152 Gene3D G3DSA:3.40.50.1380 2 151 3.5E-66 T 09-03-2017 IPR011607 Methylglyoxal synthase-like domain RG43_RS15780 0b784f1e718cda3780049f188bca61c1 152 SUPERFAMILY SSF52335 2 147 7.46E-59 T 09-03-2017 IPR011607 Methylglyoxal synthase-like domain RG43_RS15780 0b784f1e718cda3780049f188bca61c1 152 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 73 - T 09-03-2017 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 RG43_RS15780 0b784f1e718cda3780049f188bca61c1 152 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 151 1.8E-74 T 09-03-2017 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 RG43_RS15780 0b784f1e718cda3780049f188bca61c1 152 SMART SM00851 25 118 6.7E-24 T 09-03-2017 IPR011607 Methylglyoxal synthase-like domain RG43_RS03205 eacb33fd7b3b7ea2bdfd869ac0b179b0 147 Hamap MF_00764 UPF0306 protein YhbP [yhbP]. 3 140 36.009 T 09-03-2017 IPR011194 Uncharacterised protein family UPF0306 RG43_RS03205 eacb33fd7b3b7ea2bdfd869ac0b179b0 147 PIRSF PIRSF009554 1 145 2.8E-62 T 09-03-2017 IPR011194 Uncharacterised protein family UPF0306 RG43_RS03205 eacb33fd7b3b7ea2bdfd869ac0b179b0 147 SUPERFAMILY SSF50475 4 139 8.29E-14 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 RG43_RS03205 eacb33fd7b3b7ea2bdfd869ac0b179b0 147 Gene3D G3DSA:2.30.110.10 25 139 3.5E-6 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 RG43_RS23125 f0e74342c11b4a2b9aecee6467aa0f98 144 SUPERFAMILY SSF55729 6 137 3.04E-27 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS23125 f0e74342c11b4a2b9aecee6467aa0f98 144 Gene3D G3DSA:3.40.630.30 3 143 4.1E-31 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS23125 f0e74342c11b4a2b9aecee6467aa0f98 144 Pfam PF00583 Acetyltransferase (GNAT) family 54 134 1.5E-14 T 09-03-2017 IPR000182 GNAT domain GO:0008080 RG43_RS04120 08a9b1348813752b10bb807c80c4b69b 130 SUPERFAMILY SSF101756 31 127 1.57E-36 T 09-03-2017 IPR005220 Bacterial OB-fold RG43_RS04120 08a9b1348813752b10bb807c80c4b69b 130 Pfam PF04076 Bacterial OB fold (BOF) protein 25 127 1.8E-47 T 09-03-2017 IPR005220 Bacterial OB-fold RG43_RS04120 08a9b1348813752b10bb807c80c4b69b 130 TIGRFAM TIGR00156 TIGR00156: TIGR00156 family protein 2 129 2.2E-66 T 09-03-2017 IPR016052 Bacteriophage 933W, L0136 RG43_RS04120 08a9b1348813752b10bb807c80c4b69b 130 Gene3D G3DSA:2.40.50.200 30 129 7.1E-44 T 09-03-2017 IPR005220 Bacterial OB-fold RG43_RS26495 08a9b1348813752b10bb807c80c4b69b 130 SUPERFAMILY SSF101756 31 127 1.57E-36 T 09-03-2017 IPR005220 Bacterial OB-fold RG43_RS26495 08a9b1348813752b10bb807c80c4b69b 130 Pfam PF04076 Bacterial OB fold (BOF) protein 25 127 1.8E-47 T 09-03-2017 IPR005220 Bacterial OB-fold RG43_RS26495 08a9b1348813752b10bb807c80c4b69b 130 TIGRFAM TIGR00156 TIGR00156: TIGR00156 family protein 2 129 2.2E-66 T 09-03-2017 IPR016052 Bacteriophage 933W, L0136 RG43_RS26495 08a9b1348813752b10bb807c80c4b69b 130 Gene3D G3DSA:2.40.50.200 30 129 7.1E-44 T 09-03-2017 IPR005220 Bacterial OB-fold RG43_RS20800 9d5eb52b3642be79df48a4c6c4db94ff 159 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 09-03-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 RG43_RS20800 9d5eb52b3642be79df48a4c6c4db94ff 159 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 3.3E-47 T 09-03-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 RG43_RS20800 9d5eb52b3642be79df48a4c6c4db94ff 159 SUPERFAMILY SSF55083 1 153 1.07E-53 T 09-03-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 RG43_RS20800 9d5eb52b3642be79df48a4c6c4db94ff 159 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 4.9E-36 T 09-03-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 RG43_RS20800 9d5eb52b3642be79df48a4c6c4db94ff 159 Gene3D G3DSA:3.30.70.560 3 149 2.3E-56 T 09-03-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 RG43_RS12160 2e60b47fff9ca04e0b3c433e1a01d895 383 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 228 376 2.5E-45 T 09-03-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RG43_RS12160 2e60b47fff9ca04e0b3c433e1a01d895 383 SUPERFAMILY SSF47203 226 381 4.19E-50 T 09-03-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RG43_RS12160 2e60b47fff9ca04e0b3c433e1a01d895 383 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 216 1.5E-22 T 09-03-2017 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RG43_RS12160 2e60b47fff9ca04e0b3c433e1a01d895 383 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 09-03-2017 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RG43_RS12160 2e60b47fff9ca04e0b3c433e1a01d895 383 SUPERFAMILY SSF56645 1 227 1.28E-51 T 09-03-2017 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RG43_RS12160 2e60b47fff9ca04e0b3c433e1a01d895 383 Gene3D G3DSA:2.40.110.10 121 217 8.6E-28 T 09-03-2017 RG43_RS12160 2e60b47fff9ca04e0b3c433e1a01d895 383 Gene3D G3DSA:1.20.140.10 218 382 8.7E-59 T 09-03-2017 RG43_RS12160 2e60b47fff9ca04e0b3c433e1a01d895 383 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 09-03-2017 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RG43_RS12160 2e60b47fff9ca04e0b3c433e1a01d895 383 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 107 3.2E-17 T 09-03-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RG43_RS12160 2e60b47fff9ca04e0b3c433e1a01d895 383 Gene3D G3DSA:1.10.540.10 1 109 5.5E-21 T 09-03-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RG43_RS09020 2a4e77c32d13684c50e4dec75f20b905 489 Pfam PF00324 Amino acid permease 21 476 6.5E-147 T 09-03-2017 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 RG43_RS09020 2a4e77c32d13684c50e4dec75f20b905 489 PIRSF PIRSF006060 1 488 4.7E-78 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RG43_RS09020 2a4e77c32d13684c50e4dec75f20b905 489 ProSitePatterns PS00218 Amino acid permeases signature. 46 77 - T 09-03-2017 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 RG43_RS08290 e75d09a48b1b2964f88487c8102e5a4f 714 Gene3D G3DSA:3.40.1390.20 226 366 2.8E-30 T 09-03-2017 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like RG43_RS08290 e75d09a48b1b2964f88487c8102e5a4f 714 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 407 707 5.6E-139 T 09-03-2017 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 RG43_RS08290 e75d09a48b1b2964f88487c8102e5a4f 714 Gene3D G3DSA:3.40.50.300 3 224 1.8E-11 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS08290 e75d09a48b1b2964f88487c8102e5a4f 714 Pfam PF13500 AAA domain 5 230 1.8E-47 T 09-03-2017 RG43_RS08290 e75d09a48b1b2964f88487c8102e5a4f 714 Pfam PF07085 DRTGG domain 234 345 1.8E-29 T 09-03-2017 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 RG43_RS08290 e75d09a48b1b2964f88487c8102e5a4f 714 Gene3D G3DSA:3.40.50.10750 525 683 1.0E-67 T 09-03-2017 RG43_RS08290 e75d09a48b1b2964f88487c8102e5a4f 714 SUPERFAMILY SSF52540 4 241 1.22E-28 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS08290 e75d09a48b1b2964f88487c8102e5a4f 714 Pfam PF01515 Phosphate acetyl/butaryl transferase 392 707 3.7E-129 T 09-03-2017 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 RG43_RS08290 e75d09a48b1b2964f88487c8102e5a4f 714 SUPERFAMILY SSF53659 393 711 1.77E-94 T 09-03-2017 RG43_RS08290 e75d09a48b1b2964f88487c8102e5a4f 714 SUPERFAMILY SSF75138 230 354 2.75E-25 T 09-03-2017 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like RG43_RS08290 e75d09a48b1b2964f88487c8102e5a4f 714 PIRSF PIRSF006107 1 714 0.0 T 09-03-2017 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 RG43_RS25220 aa3cea93b80b2669d0a7587ee31acb21 367 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 9 353 28.196 T 09-03-2017 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530 RG43_RS25220 aa3cea93b80b2669d0a7587ee31acb21 367 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 8 351 1.0E-173 T 09-03-2017 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530 RG43_RS25220 aa3cea93b80b2669d0a7587ee31acb21 367 Pfam PF00953 Glycosyl transferase family 4 76 232 3.3E-28 T 09-03-2017 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 RG43_RS25445 56b533cc370c1e28d908debdcf79489b 79 Pfam PF00137 ATP synthase subunit C 11 69 1.6E-9 T 09-03-2017 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 RG43_RS25445 56b533cc370c1e28d908debdcf79489b 79 Gene3D G3DSA:1.20.20.10 2 77 5.0E-31 T 09-03-2017 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 RG43_RS25445 56b533cc370c1e28d908debdcf79489b 79 PRINTS PR00124 ATP synthase C subunit signature 12 31 1.6E-8 T 09-03-2017 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 RG43_RS25445 56b533cc370c1e28d908debdcf79489b 79 PRINTS PR00124 ATP synthase C subunit signature 50 75 1.6E-8 T 09-03-2017 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 RG43_RS25445 56b533cc370c1e28d908debdcf79489b 79 PRINTS PR00124 ATP synthase C subunit signature 33 48 1.6E-8 T 09-03-2017 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 RG43_RS25445 56b533cc370c1e28d908debdcf79489b 79 ProSitePatterns PS00605 ATP synthase c subunit signature. 40 61 - T 09-03-2017 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210 RG43_RS25445 56b533cc370c1e28d908debdcf79489b 79 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 77 1.9E-31 T 09-03-2017 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 RG43_RS25445 56b533cc370c1e28d908debdcf79489b 79 SUPERFAMILY SSF81333 3 77 4.58E-18 T 09-03-2017 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 RG43_RS25445 56b533cc370c1e28d908debdcf79489b 79 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 77 14.331 T 09-03-2017 RG43_RS06605 977ce8806a2aa645622b342adb4254db 160 Hamap MF_00023 SsrA-binding protein [smpB]. 1 160 73.317 T 09-03-2017 IPR000037 SsrA-binding protein GO:0003723 RG43_RS06605 977ce8806a2aa645622b342adb4254db 160 ProSitePatterns PS01317 SsrA-binding protein. 32 44 - T 09-03-2017 IPR020081 SsrA-binding protein, conserved site RG43_RS06605 977ce8806a2aa645622b342adb4254db 160 SUPERFAMILY SSF74982 8 138 7.19E-51 T 09-03-2017 IPR023620 Small protein B RG43_RS06605 977ce8806a2aa645622b342adb4254db 160 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 14 138 1.0E-69 T 09-03-2017 IPR000037 SsrA-binding protein GO:0003723 RG43_RS06605 977ce8806a2aa645622b342adb4254db 160 Gene3D G3DSA:2.40.280.10 13 133 1.4E-49 T 09-03-2017 IPR023620 Small protein B RG43_RS06605 977ce8806a2aa645622b342adb4254db 160 Pfam PF01668 SmpB protein 13 75 3.9E-28 T 09-03-2017 IPR000037 SsrA-binding protein GO:0003723 RG43_RS06605 977ce8806a2aa645622b342adb4254db 160 TIGRFAM TIGR00086 smpB: SsrA-binding protein 14 156 1.7E-54 T 09-03-2017 IPR000037 SsrA-binding protein GO:0003723 RG43_RS03390 806d23732eecf3a07d4a5478b9c46f34 129 SUPERFAMILY SSF55298 3 127 4.87E-42 T 09-03-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RG43_RS03390 806d23732eecf3a07d4a5478b9c46f34 129 Gene3D G3DSA:3.30.1330.40 2 127 3.5E-46 T 09-03-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RG43_RS03390 806d23732eecf3a07d4a5478b9c46f34 129 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 2 126 5.4E-54 T 09-03-2017 IPR006056 RidA family RG43_RS03390 806d23732eecf3a07d4a5478b9c46f34 129 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 103 121 - T 09-03-2017 IPR019897 RidA, conserved site RG43_RS03390 806d23732eecf3a07d4a5478b9c46f34 129 Pfam PF01042 Endoribonuclease L-PSP 8 126 3.3E-44 T 09-03-2017 IPR006175 YjgF/YER057c/UK114 family RG43_RS07390 441480444c78d90e8efacd47ca924f19 671 Pfam PF13718 GNAT acetyltransferase 2 369 483 1.4E-16 T 09-03-2017 IPR000182 GNAT domain GO:0008080 RG43_RS07390 441480444c78d90e8efacd47ca924f19 671 Gene3D G3DSA:3.40.50.300 169 281 1.1E-5 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS07390 441480444c78d90e8efacd47ca924f19 671 Gene3D G3DSA:3.40.630.30 454 515 8.5E-10 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS07390 441480444c78d90e8efacd47ca924f19 671 Gene3D G3DSA:3.40.630.30 354 411 8.5E-10 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS07390 441480444c78d90e8efacd47ca924f19 671 Pfam PF17176 tRNA-binding domain 537 653 2.7E-36 T 09-03-2017 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain KEGG: 00650+2.3.1.19 RG43_RS07390 441480444c78d90e8efacd47ca924f19 671 Pfam PF08351 Domain of unknown function (DUF1726) 66 150 8.2E-7 T 09-03-2017 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal Reactome: R-HSA-6790901 RG43_RS07390 441480444c78d90e8efacd47ca924f19 671 SUPERFAMILY SSF52540 172 285 6.58E-11 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS07390 441480444c78d90e8efacd47ca924f19 671 Pfam PF05127 Helicase 197 337 5.1E-41 T 09-03-2017 IPR007807 Helicase domain Reactome: R-HSA-6790901 RG43_RS07390 441480444c78d90e8efacd47ca924f19 671 SUPERFAMILY SSF55729 370 418 9.7E-11 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS07390 441480444c78d90e8efacd47ca924f19 671 SUPERFAMILY SSF55729 454 513 9.7E-11 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS07390 441480444c78d90e8efacd47ca924f19 671 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 18 652 46.863 T 09-03-2017 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 KEGG: 00650+2.3.1.19 RG43_RS03610 92c84ba3789dd9b206ce6764ebe2f429 207 Gene3D G3DSA:1.10.10.10 51 151 1.6E-29 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS03610 92c84ba3789dd9b206ce6764ebe2f429 207 SUPERFAMILY SSF46785 63 180 3.81E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS03610 92c84ba3789dd9b206ce6764ebe2f429 207 Pfam PF03551 Transcriptional regulator PadR-like family 67 136 6.7E-16 T 09-03-2017 IPR005149 Transcription regulator PadR, N-terminal RG43_RS04660 8098060ec9bd359fdfba290b3ee16e40 173 Gene3D G3DSA:2.150.10.10 41 153 2.1E-8 T 09-03-2017 IPR011049 Serralysin-like metalloprotease, C-terminal RG43_RS11475 fd2163197c7c95c49cbbdbe34a2cb54f 457 Gene3D G3DSA:1.20.1250.20 15 198 7.8E-27 T 09-03-2017 RG43_RS11475 fd2163197c7c95c49cbbdbe34a2cb54f 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 141 165 1.1E-9 T 09-03-2017 RG43_RS11475 fd2163197c7c95c49cbbdbe34a2cb54f 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 20 44 1.1E-9 T 09-03-2017 RG43_RS11475 fd2163197c7c95c49cbbdbe34a2cb54f 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 111 131 1.1E-9 T 09-03-2017 RG43_RS11475 fd2163197c7c95c49cbbdbe34a2cb54f 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 305 329 1.1E-9 T 09-03-2017 RG43_RS11475 fd2163197c7c95c49cbbdbe34a2cb54f 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 403 422 1.1E-9 T 09-03-2017 RG43_RS11475 fd2163197c7c95c49cbbdbe34a2cb54f 457 SUPERFAMILY SSF103473 251 450 2.35E-64 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS11475 fd2163197c7c95c49cbbdbe34a2cb54f 457 SUPERFAMILY SSF103473 10 195 2.35E-64 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS11475 fd2163197c7c95c49cbbdbe34a2cb54f 457 Pfam PF07690 Major Facilitator Superfamily 22 412 6.4E-51 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS11475 fd2163197c7c95c49cbbdbe34a2cb54f 457 Gene3D G3DSA:1.20.1250.20 272 448 2.7E-21 T 09-03-2017 RG43_RS23915 01f7ef453121c0bb818ead6a5da9a2b6 305 Gene3D G3DSA:1.10.10.10 1 84 2.7E-28 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS23915 01f7ef453121c0bb818ead6a5da9a2b6 305 SUPERFAMILY SSF53850 89 295 4.5E-47 T 09-03-2017 RG43_RS23915 01f7ef453121c0bb818ead6a5da9a2b6 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 9.6E-21 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS23915 01f7ef453121c0bb818ead6a5da9a2b6 305 Pfam PF03466 LysR substrate binding domain 89 293 5.4E-54 T 09-03-2017 IPR005119 LysR, substrate-binding RG43_RS23915 01f7ef453121c0bb818ead6a5da9a2b6 305 SUPERFAMILY SSF46785 1 86 9.99E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS23915 01f7ef453121c0bb818ead6a5da9a2b6 305 Gene3D G3DSA:3.40.190.10 90 175 2.1E-18 T 09-03-2017 RG43_RS23915 01f7ef453121c0bb818ead6a5da9a2b6 305 Gene3D G3DSA:3.40.190.10 176 267 2.0E-37 T 09-03-2017 RG43_RS23915 01f7ef453121c0bb818ead6a5da9a2b6 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS23915 01f7ef453121c0bb818ead6a5da9a2b6 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS23915 01f7ef453121c0bb818ead6a5da9a2b6 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS15885 cb34b8340ab7bdc8f3f7e20a9f41af4d 191 Gene3D G3DSA:3.40.50.360 1 174 1.3E-33 T 09-03-2017 IPR029039 Flavoprotein-like domain RG43_RS15885 cb34b8340ab7bdc8f3f7e20a9f41af4d 191 Pfam PF03358 NADPH-dependent FMN reductase 1 140 4.1E-34 T 09-03-2017 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 RG43_RS15885 cb34b8340ab7bdc8f3f7e20a9f41af4d 191 SUPERFAMILY SSF52218 1 166 4.04E-30 T 09-03-2017 IPR029039 Flavoprotein-like domain RG43_RS15885 cb34b8340ab7bdc8f3f7e20a9f41af4d 191 TIGRFAM TIGR03567 FMN_reduc_SsuE: FMN reductase 2 171 2.2E-73 T 09-03-2017 IPR020048 NADPH-dependent FMN reductase, SsuE GO:0008752|GO:0046306|GO:0055114 KEGG: 00740+1.5.1.38|MetaCyc: PWY-7723 RG43_RS16355 d48fa010ac54350069b258ae5dacfefb 300 Pfam PF08443 RimK-like ATP-grasp domain 97 286 1.6E-83 T 09-03-2017 IPR013651 ATP-grasp fold, RimK-type RG43_RS16355 d48fa010ac54350069b258ae5dacfefb 300 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 55.195 T 09-03-2017 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK RG43_RS16355 d48fa010ac54350069b258ae5dacfefb 300 SUPERFAMILY SSF56059 98 288 9.16E-50 T 09-03-2017 RG43_RS16355 d48fa010ac54350069b258ae5dacfefb 300 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 286 6.7E-98 T 09-03-2017 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 RG43_RS16355 d48fa010ac54350069b258ae5dacfefb 300 Gene3D G3DSA:3.30.1490.20 103 173 5.9E-8 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RG43_RS16355 d48fa010ac54350069b258ae5dacfefb 300 Gene3D G3DSA:3.30.470.20 174 277 1.4E-36 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RG43_RS16355 d48fa010ac54350069b258ae5dacfefb 300 Gene3D G3DSA:3.40.50.20 8 102 2.4E-15 T 09-03-2017 IPR016185 Pre-ATP-grasp domain RG43_RS11560 43a889e21d81066407d7801cb2ac0f08 518 Pfam PF03741 Integral membrane protein TerC family 14 203 8.9E-49 T 09-03-2017 IPR005496 Integral membrane protein TerC GO:0016021 RG43_RS11560 43a889e21d81066407d7801cb2ac0f08 518 Gene3D G3DSA:3.30.465.10 427 517 8.6E-21 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RG43_RS11560 43a889e21d81066407d7801cb2ac0f08 518 Gene3D G3DSA:3.10.580.10 286 426 1.1E-11 T 09-03-2017 RG43_RS11560 43a889e21d81066407d7801cb2ac0f08 518 SMART SM01091 431 511 3.5E-21 T 09-03-2017 IPR005170 Transporter-associated domain RG43_RS11560 43a889e21d81066407d7801cb2ac0f08 518 Pfam PF03471 Transporter associated domain 434 509 2.6E-17 T 09-03-2017 IPR005170 Transporter-associated domain RG43_RS11560 43a889e21d81066407d7801cb2ac0f08 518 SUPERFAMILY SSF54631 288 422 3.54E-22 T 09-03-2017 RG43_RS11560 43a889e21d81066407d7801cb2ac0f08 518 SUPERFAMILY SSF56176 432 517 3.82E-18 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RG43_RS05255 b8d23914181ff55fc2280029e8189235 129 SUPERFAMILY SSF51230 4 128 2.42E-46 T 09-03-2017 IPR011053 Single hybrid motif RG43_RS05255 b8d23914181ff55fc2280029e8189235 129 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 32.475 T 09-03-2017 IPR002930 Glycine cleavage system H-protein RG43_RS05255 b8d23914181ff55fc2280029e8189235 129 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 129 2.3E-61 T 09-03-2017 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 RG43_RS05255 b8d23914181ff55fc2280029e8189235 129 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 09-03-2017 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 RG43_RS05255 b8d23914181ff55fc2280029e8189235 129 Gene3D G3DSA:2.40.50.100 7 128 2.8E-52 T 09-03-2017 RG43_RS05255 b8d23914181ff55fc2280029e8189235 129 Pfam PF01597 Glycine cleavage H-protein 8 128 2.8E-50 T 09-03-2017 IPR002930 Glycine cleavage system H-protein RG43_RS19400 1bc9aac4513dfdcb8f9683ace12b8346 460 SUPERFAMILY SSF51556 118 411 1.65E-72 T 09-03-2017 IPR032466 Metal-dependent hydrolase RG43_RS19400 1bc9aac4513dfdcb8f9683ace12b8346 460 Gene3D G3DSA:2.30.40.10 78 133 3.1E-7 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RG43_RS19400 1bc9aac4513dfdcb8f9683ace12b8346 460 Pfam PF07969 Amidohydrolase family 168 431 1.8E-10 T 09-03-2017 IPR013108 Amidohydrolase 3 RG43_RS19400 1bc9aac4513dfdcb8f9683ace12b8346 460 SUPERFAMILY SSF51338 79 124 5.76E-6 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RG43_RS19400 1bc9aac4513dfdcb8f9683ace12b8346 460 Gene3D G3DSA:3.20.20.140 134 405 3.3E-93 T 09-03-2017 RG43_RS06220 79a1a145c181d1d9440426fd5255ef84 692 Pfam PF01590 GAF domain 202 344 1.5E-11 T 09-03-2017 IPR003018 GAF domain GO:0005515 RG43_RS06220 79a1a145c181d1d9440426fd5255ef84 692 Gene3D G3DSA:3.30.450.40 12 166 3.2E-9 T 09-03-2017 IPR029016 GAF domain-like RG43_RS06220 79a1a145c181d1d9440426fd5255ef84 692 Gene3D G3DSA:3.30.450.40 182 353 1.3E-23 T 09-03-2017 IPR029016 GAF domain-like RG43_RS06220 79a1a145c181d1d9440426fd5255ef84 692 SUPERFAMILY SSF55781 26 168 6.76E-11 T 09-03-2017 IPR029016 GAF domain-like RG43_RS06220 79a1a145c181d1d9440426fd5255ef84 692 SUPERFAMILY SSF52540 380 618 1.69E-71 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS06220 79a1a145c181d1d9440426fd5255ef84 692 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 667 687 7.0E-5 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RG43_RS06220 79a1a145c181d1d9440426fd5255ef84 692 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 603 620 7.0E-5 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RG43_RS06220 79a1a145c181d1d9440426fd5255ef84 692 SUPERFAMILY SSF46689 593 687 1.16E-6 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS06220 79a1a145c181d1d9440426fd5255ef84 692 SMART SM00065 26 174 3.4E-13 T 09-03-2017 IPR003018 GAF domain GO:0005515 RG43_RS06220 79a1a145c181d1d9440426fd5255ef84 692 SMART SM00065 202 354 2.1E-25 T 09-03-2017 IPR003018 GAF domain GO:0005515 RG43_RS06220 79a1a145c181d1d9440426fd5255ef84 692 Gene3D G3DSA:3.40.50.300 377 553 1.4E-60 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS06220 79a1a145c181d1d9440426fd5255ef84 692 Gene3D G3DSA:1.10.10.60 607 687 2.9E-14 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS06220 79a1a145c181d1d9440426fd5255ef84 692 SMART SM00382 401 545 8.3E-14 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS06220 79a1a145c181d1d9440426fd5255ef84 692 SUPERFAMILY SSF55781 184 360 2.4E-21 T 09-03-2017 IPR029016 GAF domain-like RG43_RS06220 79a1a145c181d1d9440426fd5255ef84 692 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 405 418 - T 09-03-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RG43_RS06220 79a1a145c181d1d9440426fd5255ef84 692 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 594 603 - T 09-03-2017 IPR025944 Sigma-54 interaction domain, conserved site RG43_RS06220 79a1a145c181d1d9440426fd5255ef84 692 Pfam PF02954 Bacterial regulatory protein, Fis family 645 684 3.0E-5 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RG43_RS06220 79a1a145c181d1d9440426fd5255ef84 692 Gene3D G3DSA:1.10.8.60 554 606 7.6E-23 T 09-03-2017 RG43_RS06220 79a1a145c181d1d9440426fd5255ef84 692 Pfam PF00158 Sigma-54 interaction domain 381 548 2.6E-70 T 09-03-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RG43_RS06830 0924d754c8a871d1b28edc3271d2b8c6 308 Gene3D G3DSA:3.40.190.10 211 274 3.6E-11 T 09-03-2017 RG43_RS06830 0924d754c8a871d1b28edc3271d2b8c6 308 Pfam PF03466 LysR substrate binding domain 102 303 3.3E-42 T 09-03-2017 IPR005119 LysR, substrate-binding RG43_RS06830 0924d754c8a871d1b28edc3271d2b8c6 308 SUPERFAMILY SSF46785 12 125 1.64E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS06830 0924d754c8a871d1b28edc3271d2b8c6 308 SUPERFAMILY SSF53850 102 305 1.21E-38 T 09-03-2017 RG43_RS06830 0924d754c8a871d1b28edc3271d2b8c6 308 Gene3D G3DSA:1.10.10.10 16 94 1.5E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS06830 0924d754c8a871d1b28edc3271d2b8c6 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 18 77 6.3E-16 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS06830 0924d754c8a871d1b28edc3271d2b8c6 308 Gene3D G3DSA:3.40.190.10 95 210 1.4E-19 T 09-03-2017 RG43_RS20050 eeb2449bc1538a4f2a2e5e592c8097d2 383 TIGRFAM TIGR03073 release_rtcB: release factor H-coupled RctB family protein 16 371 1.6E-186 T 09-03-2017 IPR017510 Release factor H-coupled RctB family protein RG43_RS20050 eeb2449bc1538a4f2a2e5e592c8097d2 383 Pfam PF01139 tRNA-splicing ligase RtcB 114 376 1.5E-59 T 09-03-2017 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 RG43_RS20050 eeb2449bc1538a4f2a2e5e592c8097d2 383 Pfam PF01139 tRNA-splicing ligase RtcB 33 105 1.8E-10 T 09-03-2017 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 RG43_RS20050 eeb2449bc1538a4f2a2e5e592c8097d2 383 SUPERFAMILY SSF103365 9 376 2.22E-105 T 09-03-2017 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 RG43_RS22755 131a8501137715fc3ff09072cca973f0 602 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 09-03-2017 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 RG43_RS22755 131a8501137715fc3ff09072cca973f0 602 SUPERFAMILY SSF56425 227 358 6.88E-43 T 09-03-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 RG43_RS22755 131a8501137715fc3ff09072cca973f0 602 Gene3D G3DSA:3.50.50.60 353 416 3.8E-106 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS22755 131a8501137715fc3ff09072cca973f0 602 Gene3D G3DSA:3.50.50.60 3 233 3.8E-106 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS22755 131a8501137715fc3ff09072cca973f0 602 SUPERFAMILY SSF46977 444 590 2.75E-46 T 09-03-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 RG43_RS22755 131a8501137715fc3ff09072cca973f0 602 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 3.0E-10 T 09-03-2017 RG43_RS22755 131a8501137715fc3ff09072cca973f0 602 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 3.0E-10 T 09-03-2017 RG43_RS22755 131a8501137715fc3ff09072cca973f0 602 Gene3D G3DSA:1.20.58.100 426 537 1.2E-38 T 09-03-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 RG43_RS22755 131a8501137715fc3ff09072cca973f0 602 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 2.5E-5 T 09-03-2017 RG43_RS22755 131a8501137715fc3ff09072cca973f0 602 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.5E-5 T 09-03-2017 RG43_RS22755 131a8501137715fc3ff09072cca973f0 602 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 2.6E-249 T 09-03-2017 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 RG43_RS22755 131a8501137715fc3ff09072cca973f0 602 Pfam PF00890 FAD binding domain 7 397 1.3E-115 T 09-03-2017 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 RG43_RS22755 131a8501137715fc3ff09072cca973f0 602 SUPERFAMILY SSF51905 361 416 1.51E-71 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS22755 131a8501137715fc3ff09072cca973f0 602 SUPERFAMILY SSF51905 3 250 1.51E-71 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS22755 131a8501137715fc3ff09072cca973f0 602 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 3 582 0.0 T 09-03-2017 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 RG43_RS22755 131a8501137715fc3ff09072cca973f0 602 PIRSF PIRSF000171 1 576 1.4E-42 T 09-03-2017 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit Reactome: R-HSA-611105|Reactome: R-HSA-71403 RG43_RS22755 131a8501137715fc3ff09072cca973f0 602 Gene3D G3DSA:3.90.700.10 234 352 3.6E-37 T 09-03-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 RG43_RS22755 131a8501137715fc3ff09072cca973f0 602 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 5.5E-39 T 09-03-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 RG43_RS22755 131a8501137715fc3ff09072cca973f0 602 Gene3D G3DSA:4.10.80.40 543 577 5.5E-18 T 09-03-2017 RG43_RS00420 5f96091f8fa35795dd268e47888337a3 156 SUPERFAMILY SSF55804 1 149 6.15E-37 T 09-03-2017 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 RG43_RS00420 5f96091f8fa35795dd268e47888337a3 156 Gene3D G3DSA:3.40.930.10 1 150 7.7E-47 T 09-03-2017 IPR002178 PTS EIIA type-2 domain RG43_RS00420 5f96091f8fa35795dd268e47888337a3 156 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 7 134 3.3E-38 T 09-03-2017 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 RG43_RS00420 5f96091f8fa35795dd268e47888337a3 156 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 149 3.8E-35 T 09-03-2017 IPR002178 PTS EIIA type-2 domain RG43_RS18205 08bea21b1b35b84badf991d80e0bc075 372 TIGRFAM TIGR02050 gshA_cyan_rel: carboxylate-amine ligase, YbdK family 13 296 8.9E-119 T 09-03-2017 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 RG43_RS18205 08bea21b1b35b84badf991d80e0bc075 372 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 14 292 1.2E-93 T 09-03-2017 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 RG43_RS18205 08bea21b1b35b84badf991d80e0bc075 372 Hamap MF_01609 Glutamate--cysteine ligase [gshA]. 1 372 92.911 T 09-03-2017 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 RG43_RS18205 08bea21b1b35b84badf991d80e0bc075 372 SUPERFAMILY SSF55931 4 369 2.09E-109 T 09-03-2017 RG43_RS12270 20cf23f7547612ea55177822ec7a8278 208 Pfam PF12800 4Fe-4S binding domain 67 78 0.067 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS12270 20cf23f7547612ea55177822ec7a8278 208 Pfam PF13247 4Fe-4S dicluster domain 116 195 4.4E-12 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS12270 20cf23f7547612ea55177822ec7a8278 208 SUPERFAMILY SSF54862 61 205 3.77E-37 T 09-03-2017 RG43_RS12270 20cf23f7547612ea55177822ec7a8278 208 Gene3D G3DSA:3.30.70.20 62 127 1.3E-10 T 09-03-2017 RG43_RS12270 20cf23f7547612ea55177822ec7a8278 208 Gene3D G3DSA:3.30.70.20 128 158 5.3E-11 T 09-03-2017 RG43_RS12270 20cf23f7547612ea55177822ec7a8278 208 Gene3D G3DSA:3.30.70.20 159 202 3.3E-13 T 09-03-2017 RG43_RS12270 20cf23f7547612ea55177822ec7a8278 208 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 156 167 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS12270 20cf23f7547612ea55177822ec7a8278 208 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 183 194 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS07305 d9eefd59eb5ce90c28528022b1f8a77a 345 SUPERFAMILY SSF56042 171 342 6.73E-65 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain RG43_RS07305 d9eefd59eb5ce90c28528022b1f8a77a 345 Gene3D G3DSA:3.30.1330.10 22 170 3.0E-62 T 09-03-2017 IPR016188 PurM-like, N-terminal domain RG43_RS07305 d9eefd59eb5ce90c28528022b1f8a77a 345 SUPERFAMILY SSF55326 7 170 1.11E-52 T 09-03-2017 RG43_RS07305 d9eefd59eb5ce90c28528022b1f8a77a 345 Gene3D G3DSA:3.90.650.10 171 343 2.0E-69 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain RG43_RS07305 d9eefd59eb5ce90c28528022b1f8a77a 345 Pfam PF00586 AIR synthase related protein, N-terminal domain 59 164 2.4E-15 T 09-03-2017 IPR016188 PurM-like, N-terminal domain RG43_RS07305 d9eefd59eb5ce90c28528022b1f8a77a 345 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 7 335 2.5E-155 T 09-03-2017 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 RG43_RS07305 d9eefd59eb5ce90c28528022b1f8a77a 345 Pfam PF02769 AIR synthase related protein, C-terminal domain 177 341 7.8E-40 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain RG43_RS07305 d9eefd59eb5ce90c28528022b1f8a77a 345 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 7 344 47.055 T 09-03-2017 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 RG43_RS14280 34dc6d8fafc3d390caebcf67d34bf39d 417 Gene3D G3DSA:3.40.50.720 242 384 4.3E-32 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS14280 34dc6d8fafc3d390caebcf67d34bf39d 417 SUPERFAMILY SSF81324 166 261 9.16E-19 T 09-03-2017 RG43_RS14280 34dc6d8fafc3d390caebcf67d34bf39d 417 SUPERFAMILY SSF81324 79 119 9.16E-19 T 09-03-2017 RG43_RS14280 34dc6d8fafc3d390caebcf67d34bf39d 417 Pfam PF02254 TrkA-N domain 246 365 7.2E-20 T 09-03-2017 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 RG43_RS14280 34dc6d8fafc3d390caebcf67d34bf39d 417 Gene3D G3DSA:1.10.287.70 142 222 5.6E-15 T 09-03-2017 RG43_RS14280 34dc6d8fafc3d390caebcf67d34bf39d 417 Pfam PF07885 Ion channel 149 221 2.8E-15 T 09-03-2017 IPR013099 Potassium channel domain RG43_RS14280 34dc6d8fafc3d390caebcf67d34bf39d 417 SUPERFAMILY SSF51735 242 384 3.94E-27 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS07645 78e039f50c802839e4b1b5fa8f5d14eb 575 Gene3D G3DSA:3.50.30.10 133 255 3.0E-42 T 09-03-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RG43_RS07645 78e039f50c802839e4b1b5fa8f5d14eb 575 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 541 4.7E-127 T 09-03-2017 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 RG43_RS07645 78e039f50c802839e4b1b5fa8f5d14eb 575 PIRSF PIRSF000732 1 574 1.1E-218 T 09-03-2017 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 RG43_RS07645 78e039f50c802839e4b1b5fa8f5d14eb 575 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 2.2E-22 T 09-03-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RG43_RS07645 78e039f50c802839e4b1b5fa8f5d14eb 575 SUPERFAMILY SSF52009 125 246 4.58E-37 T 09-03-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RG43_RS07645 78e039f50c802839e4b1b5fa8f5d14eb 575 SUPERFAMILY SSF51621 249 549 2.62E-110 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RG43_RS07645 78e039f50c802839e4b1b5fa8f5d14eb 575 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 566 9.4E-274 T 09-03-2017 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 RG43_RS07645 78e039f50c802839e4b1b5fa8f5d14eb 575 SUPERFAMILY SSF47831 23 143 3.27E-34 T 09-03-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RG43_RS07645 78e039f50c802839e4b1b5fa8f5d14eb 575 Gene3D G3DSA:1.10.274.10 23 132 1.2E-39 T 09-03-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RG43_RS07645 78e039f50c802839e4b1b5fa8f5d14eb 575 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 5.5E-30 T 09-03-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RG43_RS07645 78e039f50c802839e4b1b5fa8f5d14eb 575 Gene3D G3DSA:3.20.20.60 256 572 6.2E-116 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RG43_RS07645 78e039f50c802839e4b1b5fa8f5d14eb 575 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 09-03-2017 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 RG43_RS07645 78e039f50c802839e4b1b5fa8f5d14eb 575 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 09-03-2017 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 RG43_RS07645 78e039f50c802839e4b1b5fa8f5d14eb 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 3.5E-31 T 09-03-2017 RG43_RS07645 78e039f50c802839e4b1b5fa8f5d14eb 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 3.5E-31 T 09-03-2017 RG43_RS07645 78e039f50c802839e4b1b5fa8f5d14eb 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 3.5E-31 T 09-03-2017 RG43_RS07645 78e039f50c802839e4b1b5fa8f5d14eb 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 3.5E-31 T 09-03-2017 RG43_RS22290 f0d1233ca95f743a927fe329d7424072 154 Gene3D G3DSA:3.20.20.70 22 129 8.8E-8 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS22290 f0d1233ca95f743a927fe329d7424072 154 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 09-03-2017 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 RG43_RS22290 f0d1233ca95f743a927fe329d7424072 154 Pfam PF13353 4Fe-4S single cluster domain 12 151 7.8E-53 T 09-03-2017 RG43_RS22290 f0d1233ca95f743a927fe329d7424072 154 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 2 153 2.9E-66 T 09-03-2017 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 RG43_RS22290 f0d1233ca95f743a927fe329d7424072 154 PIRSF PIRSF000368 1 154 2.3E-61 T 09-03-2017 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 RG43_RS22290 f0d1233ca95f743a927fe329d7424072 154 SUPERFAMILY SSF102114 16 117 2.35E-6 T 09-03-2017 RG43_RS07010 27a1dc2753167fd00644b4d7889237d1 92 SUPERFAMILY SSF52540 17 77 1.72E-20 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS07010 27a1dc2753167fd00644b4d7889237d1 92 Gene3D G3DSA:3.40.50.300 16 82 1.1E-20 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS07010 27a1dc2753167fd00644b4d7889237d1 92 Pfam PF00005 ABC transporter 26 83 2.9E-16 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS02100 88250756c0abd65a4a37090dfb95b343 457 Gene3D G3DSA:1.10.8.210 150 212 4.0E-23 T 09-03-2017 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 RG43_RS02100 88250756c0abd65a4a37090dfb95b343 457 SUPERFAMILY SSF75615 114 207 1.96E-26 T 09-03-2017 RG43_RS02100 88250756c0abd65a4a37090dfb95b343 457 SUPERFAMILY SSF51735 2 112 4.44E-27 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS02100 88250756c0abd65a4a37090dfb95b343 457 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 218 426 3.9E-50 T 09-03-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 RG43_RS02100 88250756c0abd65a4a37090dfb95b343 457 Gene3D G3DSA:3.40.50.720 2 112 1.1E-36 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS02100 88250756c0abd65a4a37090dfb95b343 457 Pfam PF10414 Sirohaem synthase dimerisation region 150 207 3.1E-18 T 09-03-2017 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 RG43_RS02100 88250756c0abd65a4a37090dfb95b343 457 PIRSF PIRSF036426 1 457 5.5E-205 T 09-03-2017 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 RG43_RS02100 88250756c0abd65a4a37090dfb95b343 457 Hamap MF_01646 Siroheme synthase [cysG]. 1 457 50.976 T 09-03-2017 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 RG43_RS02100 88250756c0abd65a4a37090dfb95b343 457 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 204 1.6E-70 T 09-03-2017 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 RG43_RS02100 88250756c0abd65a4a37090dfb95b343 457 Pfam PF13241 Putative NAD(P)-binding 6 115 7.1E-26 T 09-03-2017 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 RG43_RS02100 88250756c0abd65a4a37090dfb95b343 457 SUPERFAMILY SSF53790 215 456 1.57E-79 T 09-03-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 RG43_RS02100 88250756c0abd65a4a37090dfb95b343 457 Pfam PF14824 Sirohaem biosynthesis protein central 119 145 7.0E-9 T 09-03-2017 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 RG43_RS02100 88250756c0abd65a4a37090dfb95b343 457 Gene3D G3DSA:3.30.160.110 113 148 1.4E-19 T 09-03-2017 RG43_RS02100 88250756c0abd65a4a37090dfb95b343 457 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 216 448 1.6E-91 T 09-03-2017 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 RG43_RS02100 88250756c0abd65a4a37090dfb95b343 457 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 296 329 - T 09-03-2017 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 RG43_RS02100 88250756c0abd65a4a37090dfb95b343 457 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 221 235 - T 09-03-2017 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 RG43_RS02100 88250756c0abd65a4a37090dfb95b343 457 Gene3D G3DSA:3.30.950.10 332 456 5.6E-48 T 09-03-2017 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 RG43_RS02100 88250756c0abd65a4a37090dfb95b343 457 Gene3D G3DSA:3.40.1010.10 215 331 8.5E-46 T 09-03-2017 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 RG43_RS22565 fa6722683dbb832b1c9f0e37fbd9c1a0 251 SUPERFAMILY SSF46785 5 60 2.11E-11 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS22565 fa6722683dbb832b1c9f0e37fbd9c1a0 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 5.4E-6 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RG43_RS22565 fa6722683dbb832b1c9f0e37fbd9c1a0 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 5.4E-6 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RG43_RS22565 fa6722683dbb832b1c9f0e37fbd9c1a0 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 09-03-2017 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 RG43_RS22565 fa6722683dbb832b1c9f0e37fbd9c1a0 251 Pfam PF08220 DeoR-like helix-turn-helix domain 6 62 2.3E-20 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RG43_RS22565 fa6722683dbb832b1c9f0e37fbd9c1a0 251 Gene3D G3DSA:1.10.10.10 1 55 6.0E-8 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS22565 fa6722683dbb832b1c9f0e37fbd9c1a0 251 SUPERFAMILY SSF100950 75 234 1.67E-23 T 09-03-2017 RG43_RS22565 fa6722683dbb832b1c9f0e37fbd9c1a0 251 Hamap MF_01563 HTH-type transcriptional regulator UlaR [ulaR]. 1 251 71.049 T 09-03-2017 IPR023711 Transcription regulator HTH, UlaR GO:0005737|GO:0045892 RG43_RS22565 fa6722683dbb832b1c9f0e37fbd9c1a0 251 Pfam PF00455 DeoR C terminal sensor domain 76 230 2.2E-37 T 09-03-2017 IPR014036 DeoR C-terminal sensor domain RG43_RS22565 fa6722683dbb832b1c9f0e37fbd9c1a0 251 SMART SM01134 74 232 3.4E-38 T 09-03-2017 RG43_RS22565 fa6722683dbb832b1c9f0e37fbd9c1a0 251 SMART SM00420 6 58 4.8E-23 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RG43_RS22565 fa6722683dbb832b1c9f0e37fbd9c1a0 251 Gene3D G3DSA:3.40.50.1360 76 215 2.8E-4 T 09-03-2017 RG43_RS22305 ddbb739c2beef0417384fb82527844f3 183 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 16 180 24.065 T 09-03-2017 IPR006839 Ribosome-associated, YjgA RG43_RS22305 ddbb739c2beef0417384fb82527844f3 183 Gene3D G3DSA:1.10.60.30 112 182 1.6E-32 T 09-03-2017 IPR023153 PSPTO4464-like domain RG43_RS22305 ddbb739c2beef0417384fb82527844f3 183 SUPERFAMILY SSF158710 37 179 3.4E-51 T 09-03-2017 RG43_RS22305 ddbb739c2beef0417384fb82527844f3 183 Pfam PF04751 Protein of unknown function (DUF615) 26 176 6.6E-55 T 09-03-2017 IPR006839 Ribosome-associated, YjgA RG43_RS22305 ddbb739c2beef0417384fb82527844f3 183 Gene3D G3DSA:1.10.60.30 36 110 4.3E-29 T 09-03-2017 IPR023153 PSPTO4464-like domain RG43_RS22305 ddbb739c2beef0417384fb82527844f3 183 PIRSF PIRSF016183 10 183 5.7E-72 T 09-03-2017 IPR006839 Ribosome-associated, YjgA RG43_RS23080 ffd01f4f2a293e0f3267280899af4d75 150 TIGRFAM TIGR03293 PhnG_redo: phosphonate C-P lyase system protein PhnG 6 148 1.3E-53 T 09-03-2017 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 RG43_RS23080 ffd01f4f2a293e0f3267280899af4d75 150 Pfam PF06754 Phosphonate metabolism protein PhnG 7 147 4.0E-52 T 09-03-2017 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 RG43_RS00460 3ff4cae3eab8617935adc1d51c352d85 463 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 375 395 - T 09-03-2017 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 RG43_RS00460 3ff4cae3eab8617935adc1d51c352d85 463 Pfam PF00860 Permease family 34 426 1.8E-112 T 09-03-2017 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RG43_RS00460 3ff4cae3eab8617935adc1d51c352d85 463 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 29 457 7.3E-143 T 09-03-2017 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 RG43_RS06710 eb4e13fe03cacb9dbe8df4ca1fc0b1ff 386 Gene3D G3DSA:1.20.59.10 1 106 5.2E-46 T 09-03-2017 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 RG43_RS06710 eb4e13fe03cacb9dbe8df4ca1fc0b1ff 386 SUPERFAMILY SSF53850 105 291 2.5E-55 T 09-03-2017 RG43_RS06710 eb4e13fe03cacb9dbe8df4ca1fc0b1ff 386 Pfam PF01817 Chorismate mutase type II 11 89 5.9E-17 T 09-03-2017 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 RG43_RS06710 eb4e13fe03cacb9dbe8df4ca1fc0b1ff 386 PIRSF PIRSF001500 1 380 1.2E-145 T 09-03-2017 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 RG43_RS06710 eb4e13fe03cacb9dbe8df4ca1fc0b1ff 386 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 325 332 - T 09-03-2017 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 RG43_RS06710 eb4e13fe03cacb9dbe8df4ca1fc0b1ff 386 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 261 283 - T 09-03-2017 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 RG43_RS06710 eb4e13fe03cacb9dbe8df4ca1fc0b1ff 386 Gene3D G3DSA:3.30.70.260 294 378 1.1E-25 T 09-03-2017 RG43_RS06710 eb4e13fe03cacb9dbe8df4ca1fc0b1ff 386 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 7 89 8.9E-42 T 09-03-2017 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 RG43_RS06710 eb4e13fe03cacb9dbe8df4ca1fc0b1ff 386 SUPERFAMILY SSF48600 6 93 1.41E-22 T 09-03-2017 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 RG43_RS06710 eb4e13fe03cacb9dbe8df4ca1fc0b1ff 386 Gene3D G3DSA:3.40.190.10 107 193 5.8E-33 T 09-03-2017 RG43_RS06710 eb4e13fe03cacb9dbe8df4ca1fc0b1ff 386 SUPERFAMILY SSF55021 280 377 1.53E-22 T 09-03-2017 RG43_RS06710 eb4e13fe03cacb9dbe8df4ca1fc0b1ff 386 Gene3D G3DSA:3.40.190.10 194 268 3.1E-28 T 09-03-2017 RG43_RS06710 eb4e13fe03cacb9dbe8df4ca1fc0b1ff 386 SMART SM00830 11 91 1.0E-24 T 09-03-2017 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 RG43_RS06710 eb4e13fe03cacb9dbe8df4ca1fc0b1ff 386 Pfam PF00800 Prephenate dehydratase 106 286 2.3E-61 T 09-03-2017 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 RG43_RS12455 8e0466edc2a75f012c228b2c0c49b046 109 SUPERFAMILY SSF141488 28 107 3.53E-24 T 09-03-2017 IPR018660 C-type lysozyme, inhibitor RG43_RS12455 8e0466edc2a75f012c228b2c0c49b046 109 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 35 96 2.8E-17 T 09-03-2017 IPR018660 C-type lysozyme, inhibitor RG43_RS20155 3acc687b20c828132eaa43d06d7c5816 49 Pfam PF05321 Haemolysin expression modulating protein 1 46 3.1E-23 T 09-03-2017 IPR007985 Haemolysin expression modulating, HHA RG43_RS20155 3acc687b20c828132eaa43d06d7c5816 49 Gene3D G3DSA:1.20.1280.40 1 49 2.9E-26 T 09-03-2017 IPR007985 Haemolysin expression modulating, HHA RG43_RS20155 3acc687b20c828132eaa43d06d7c5816 49 SUPERFAMILY SSF68989 1 48 2.62E-22 T 09-03-2017 IPR007985 Haemolysin expression modulating, HHA RG43_RS13965 95e7d2b8a6a041fbc21f3f4b4f18c451 1035 Gene3D G3DSA:3.30.2090.10 182 276 3.2E-30 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RG43_RS13965 95e7d2b8a6a041fbc21f3f4b4f18c451 1035 Gene3D G3DSA:3.30.70.1430 39 140 4.0E-36 T 09-03-2017 RG43_RS13965 95e7d2b8a6a041fbc21f3f4b4f18c451 1035 SUPERFAMILY SSF82693 39 132 1.46E-27 T 09-03-2017 RG43_RS13965 95e7d2b8a6a041fbc21f3f4b4f18c451 1035 SUPERFAMILY SSF82714 720 806 2.22E-21 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RG43_RS13965 95e7d2b8a6a041fbc21f3f4b4f18c451 1035 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 7.5E-107 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS13965 95e7d2b8a6a041fbc21f3f4b4f18c451 1035 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 7.5E-107 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS13965 95e7d2b8a6a041fbc21f3f4b4f18c451 1035 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 7.5E-107 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS13965 95e7d2b8a6a041fbc21f3f4b4f18c451 1035 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 7.5E-107 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS13965 95e7d2b8a6a041fbc21f3f4b4f18c451 1035 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 7.5E-107 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS13965 95e7d2b8a6a041fbc21f3f4b4f18c451 1035 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 7.5E-107 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS13965 95e7d2b8a6a041fbc21f3f4b4f18c451 1035 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 7.5E-107 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS13965 95e7d2b8a6a041fbc21f3f4b4f18c451 1035 PRINTS PR00702 Acriflavin resistance protein family signature 550 567 7.5E-107 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS13965 95e7d2b8a6a041fbc21f3f4b4f18c451 1035 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 7.5E-107 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS13965 95e7d2b8a6a041fbc21f3f4b4f18c451 1035 Pfam PF00873 AcrB/AcrD/AcrF family 2 1024 0.0 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS13965 95e7d2b8a6a041fbc21f3f4b4f18c451 1035 SUPERFAMILY SSF82714 183 273 3.4E-23 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RG43_RS13965 95e7d2b8a6a041fbc21f3f4b4f18c451 1035 Gene3D G3DSA:3.30.70.1430 565 669 2.1E-33 T 09-03-2017 RG43_RS13965 95e7d2b8a6a041fbc21f3f4b4f18c451 1035 Gene3D G3DSA:3.30.2090.10 720 805 1.5E-24 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RG43_RS13965 95e7d2b8a6a041fbc21f3f4b4f18c451 1035 SUPERFAMILY SSF82693 136 183 4.34E-21 T 09-03-2017 RG43_RS13965 95e7d2b8a6a041fbc21f3f4b4f18c451 1035 SUPERFAMILY SSF82693 275 331 4.34E-21 T 09-03-2017 RG43_RS13965 95e7d2b8a6a041fbc21f3f4b4f18c451 1035 SUPERFAMILY SSF82866 835 1024 6.28E-39 T 09-03-2017 RG43_RS13965 95e7d2b8a6a041fbc21f3f4b4f18c451 1035 SUPERFAMILY SSF82866 297 495 1.31E-48 T 09-03-2017 RG43_RS13965 95e7d2b8a6a041fbc21f3f4b4f18c451 1035 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1034 0.0 T 09-03-2017 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 RG43_RS13965 95e7d2b8a6a041fbc21f3f4b4f18c451 1035 SUPERFAMILY SSF82693 563 669 2.62E-28 T 09-03-2017 RG43_RS13965 95e7d2b8a6a041fbc21f3f4b4f18c451 1035 SUPERFAMILY SSF82693 670 719 2.51E-24 T 09-03-2017 RG43_RS13965 95e7d2b8a6a041fbc21f3f4b4f18c451 1035 SUPERFAMILY SSF82693 806 854 2.51E-24 T 09-03-2017 RG43_RS13965 95e7d2b8a6a041fbc21f3f4b4f18c451 1035 Gene3D G3DSA:1.10.3850.10 281 498 1.1E-58 T 09-03-2017 RG43_RS13965 95e7d2b8a6a041fbc21f3f4b4f18c451 1035 Gene3D G3DSA:1.10.3850.10 813 1025 6.9E-51 T 09-03-2017 RG43_RS06945 9224d9b37ee6655d24a750fa28de8724 518 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 52 268 8.0E-32 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RG43_RS06945 9224d9b37ee6655d24a750fa28de8724 518 SUPERFAMILY SSF53850 40 268 1.42E-35 T 09-03-2017 RG43_RS06945 9224d9b37ee6655d24a750fa28de8724 518 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 5 473 47.557 T 09-03-2017 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 RG43_RS06945 9224d9b37ee6655d24a750fa28de8724 518 SMART SM00062 47 269 2.3E-51 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RG43_RS06945 9224d9b37ee6655d24a750fa28de8724 518 Pfam PF01464 Transglycosylase SLT domain 297 402 3.2E-22 T 09-03-2017 IPR008258 Transglycosylase SLT domain 1 RG43_RS06945 9224d9b37ee6655d24a750fa28de8724 518 SUPERFAMILY SSF53955 245 398 9.01E-34 T 09-03-2017 IPR023346 Lysozyme-like domain RG43_RS06945 9224d9b37ee6655d24a750fa28de8724 518 SUPERFAMILY SSF53955 433 441 9.01E-34 T 09-03-2017 IPR023346 Lysozyme-like domain RG43_RS06945 9224d9b37ee6655d24a750fa28de8724 518 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 310 338 - T 09-03-2017 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 RG43_RS06945 9224d9b37ee6655d24a750fa28de8724 518 Gene3D G3DSA:3.40.190.10 20 158 5.9E-17 T 09-03-2017 RG43_RS06945 9224d9b37ee6655d24a750fa28de8724 518 Gene3D G3DSA:1.10.530.10 288 462 2.0E-35 T 09-03-2017 RG43_RS21130 60e578c177a169cec19325fad173e260 313 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 1 310 2.2E-136 T 09-03-2017 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RG43_RS21130 60e578c177a169cec19325fad173e260 313 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 311 39.581 T 09-03-2017 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RG43_RS21130 60e578c177a169cec19325fad173e260 313 SUPERFAMILY SSF53335 7 113 3.63E-46 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS21130 60e578c177a169cec19325fad173e260 313 SUPERFAMILY SSF53335 213 310 3.63E-46 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS21130 60e578c177a169cec19325fad173e260 313 SUPERFAMILY SSF81799 114 213 5.75E-36 T 09-03-2017 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RG43_RS21130 60e578c177a169cec19325fad173e260 313 Gene3D G3DSA:1.10.150.170 112 215 4.8E-39 T 09-03-2017 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RG43_RS21130 60e578c177a169cec19325fad173e260 313 PIRSF PIRSF004486 1 312 2.3E-104 T 09-03-2017 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RG43_RS21130 60e578c177a169cec19325fad173e260 313 Pfam PF01795 MraW methylase family 5 310 5.6E-124 T 09-03-2017 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RG43_RS21130 60e578c177a169cec19325fad173e260 313 Gene3D G3DSA:3.40.50.150 7 110 3.8E-52 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS21130 60e578c177a169cec19325fad173e260 313 Gene3D G3DSA:3.40.50.150 216 312 3.8E-52 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS22940 66328130275e0d2e4c4ea6b62021a5df 76 Pfam PF06902 Divergent 4Fe-4S mono-cluster 13 76 6.5E-29 T 09-03-2017 IPR010693 Divergent 4Fe-4S mono-cluster RG43_RS24965 37bbeaa251fb40b8751d18a687dd128e 753 PIRSF PIRSF000382 2 753 0.0 T 09-03-2017 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 RG43_RS24965 37bbeaa251fb40b8751d18a687dd128e 753 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 426 749 1.6E-163 T 09-03-2017 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 RG43_RS24965 37bbeaa251fb40b8751d18a687dd128e 753 Gene3D G3DSA:3.20.20.210 5 384 1.6E-151 T 09-03-2017 RG43_RS24965 37bbeaa251fb40b8751d18a687dd128e 753 SUPERFAMILY SSF51726 391 751 1.57E-120 T 09-03-2017 RG43_RS24965 37bbeaa251fb40b8751d18a687dd128e 753 SUPERFAMILY SSF51726 5 389 5.49E-115 T 09-03-2017 RG43_RS24965 37bbeaa251fb40b8751d18a687dd128e 753 Gene3D G3DSA:3.20.20.210 387 751 6.3E-136 T 09-03-2017 RG43_RS24965 37bbeaa251fb40b8751d18a687dd128e 753 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 753 37.564 T 09-03-2017 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 RG43_RS24965 37bbeaa251fb40b8751d18a687dd128e 753 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 752 0.0 T 09-03-2017 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 RG43_RS24965 37bbeaa251fb40b8751d18a687dd128e 753 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 312 1.7E-125 T 09-03-2017 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 RG43_RS02680 958a81e103d053435702f44e8469e795 483 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 432 1.3E-115 T 09-03-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RG43_RS02680 958a81e103d053435702f44e8469e795 483 Pfam PF00474 Sodium:solute symporter family 36 432 1.4E-142 T 09-03-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RG43_RS02680 958a81e103d053435702f44e8469e795 483 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 155 180 - T 09-03-2017 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 RG43_RS02680 958a81e103d053435702f44e8469e795 483 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 414 434 - T 09-03-2017 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 RG43_RS02680 958a81e103d053435702f44e8469e795 483 TIGRFAM TIGR02119 panF: sodium/pantothenate symporter 4 471 1.5E-228 T 09-03-2017 IPR011849 Sodium/pantothenate symporter GO:0015081|GO:0015233|GO:0015887|GO:0016021|GO:0031402|GO:0071436 RG43_RS25530 b1fe2da16af8b1102e141ec785aa823d 241 Pfam PF01895 PhoU domain 128 212 1.7E-17 T 09-03-2017 IPR026022 PhoU domain RG43_RS25530 b1fe2da16af8b1102e141ec785aa823d 241 Pfam PF01895 PhoU domain 27 111 6.5E-20 T 09-03-2017 IPR026022 PhoU domain RG43_RS25530 b1fe2da16af8b1102e141ec785aa823d 241 Gene3D G3DSA:1.20.58.220 9 114 2.0E-36 T 09-03-2017 RG43_RS25530 b1fe2da16af8b1102e141ec785aa823d 241 Gene3D G3DSA:1.20.58.220 127 235 1.6E-31 T 09-03-2017 RG43_RS25530 b1fe2da16af8b1102e141ec785aa823d 241 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 13 221 5.1E-71 T 09-03-2017 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 RG43_RS25530 b1fe2da16af8b1102e141ec785aa823d 241 SUPERFAMILY SSF109755 13 229 1.26E-69 T 09-03-2017 RG43_RS25530 b1fe2da16af8b1102e141ec785aa823d 241 PIRSF PIRSF003107 7 226 5.6E-67 T 09-03-2017 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 RG43_RS01925 d8521a76d5088ea0467c0daab9e28465 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 1.7E-22 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RG43_RS01925 d8521a76d5088ea0467c0daab9e28465 239 Gene3D G3DSA:1.10.10.10 132 235 1.3E-32 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS01925 d8521a76d5088ea0467c0daab9e28465 239 Pfam PF00072 Response regulator receiver domain 7 117 1.3E-29 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS01925 d8521a76d5088ea0467c0daab9e28465 239 SMART SM00862 156 232 1.7E-23 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RG43_RS01925 d8521a76d5088ea0467c0daab9e28465 239 SUPERFAMILY SSF46894 132 234 2.07E-26 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RG43_RS01925 d8521a76d5088ea0467c0daab9e28465 239 SMART SM00448 5 116 8.6E-45 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS01925 d8521a76d5088ea0467c0daab9e28465 239 SUPERFAMILY SSF52172 3 126 8.4E-42 T 09-03-2017 IPR011006 CheY-like superfamily RG43_RS01925 d8521a76d5088ea0467c0daab9e28465 239 Gene3D G3DSA:3.40.50.2300 4 127 1.4E-42 T 09-03-2017 RG43_RS06540 623712a94f47a7efd53888abcbbf2a3b 134 Gene3D G3DSA:1.10.287.1050 1 58 2.6E-23 T 09-03-2017 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 RG43_RS06540 623712a94f47a7efd53888abcbbf2a3b 134 SUPERFAMILY SSF81273 92 134 7.85E-12 T 09-03-2017 RG43_RS06540 623712a94f47a7efd53888abcbbf2a3b 134 PIRSF PIRSF002096 1 134 8.0E-56 T 09-03-2017 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 RG43_RS06540 623712a94f47a7efd53888abcbbf2a3b 134 SUPERFAMILY SSF81273 3 58 3.92E-18 T 09-03-2017 RG43_RS06540 623712a94f47a7efd53888abcbbf2a3b 134 Gene3D G3DSA:4.10.430.10 91 134 5.4E-26 T 09-03-2017 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 RG43_RS06540 623712a94f47a7efd53888abcbbf2a3b 134 SMART SM00528 87 134 1.5E-27 T 09-03-2017 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 RG43_RS06540 623712a94f47a7efd53888abcbbf2a3b 134 Pfam PF00816 H-NS histone family 39 128 4.0E-20 T 09-03-2017 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 RG43_RS05780 f5e62376b0bf39f80d9e5a98cbb04d4b 268 Gene3D G3DSA:3.40.50.720 5 262 7.9E-54 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS05780 f5e62376b0bf39f80d9e5a98cbb04d4b 268 Pfam PF00899 ThiF family 20 260 1.6E-37 T 09-03-2017 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RG43_RS05780 f5e62376b0bf39f80d9e5a98cbb04d4b 268 SUPERFAMILY SSF69572 10 259 1.09E-63 T 09-03-2017 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RG43_RS22455 0c6ca0d25f1216844016be293b1a4f7e 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 5.2E-8 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RG43_RS22455 0c6ca0d25f1216844016be293b1a4f7e 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 5.2E-8 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RG43_RS22455 0c6ca0d25f1216844016be293b1a4f7e 215 Gene3D G3DSA:1.10.10.60 11 44 2.4E-15 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS22455 0c6ca0d25f1216844016be293b1a4f7e 215 SUPERFAMILY SSF46689 10 83 2.74E-18 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS22455 0c6ca0d25f1216844016be293b1a4f7e 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 61 1.0E-14 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RG43_RS22455 0c6ca0d25f1216844016be293b1a4f7e 215 SUPERFAMILY SSF48498 81 207 2.11E-25 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RG43_RS22455 0c6ca0d25f1216844016be293b1a4f7e 215 Gene3D G3DSA:1.10.357.10 71 197 5.2E-21 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RG43_RS22455 0c6ca0d25f1216844016be293b1a4f7e 215 Gene3D G3DSA:1.10.10.60 45 70 8.0E-11 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS21495 e8e40be881874cecd7d3b7b678fff60f 195 SMART SM00852 7 153 1.4E-23 T 09-03-2017 IPR001453 MoaB/Mog domain RG43_RS21495 e8e40be881874cecd7d3b7b678fff60f 195 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 69 82 - T 09-03-2017 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 RG43_RS21495 e8e40be881874cecd7d3b7b678fff60f 195 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 4 146 2.2E-40 T 09-03-2017 IPR001453 MoaB/Mog domain RG43_RS21495 e8e40be881874cecd7d3b7b678fff60f 195 Gene3D G3DSA:3.40.980.10 2 188 1.8E-54 T 09-03-2017 IPR001453 MoaB/Mog domain RG43_RS21495 e8e40be881874cecd7d3b7b678fff60f 195 Pfam PF00994 Probable molybdopterin binding domain 8 147 5.8E-28 T 09-03-2017 IPR001453 MoaB/Mog domain RG43_RS21495 e8e40be881874cecd7d3b7b678fff60f 195 SUPERFAMILY SSF53218 3 188 2.22E-49 T 09-03-2017 IPR001453 MoaB/Mog domain RG43_RS12570 f68f29741e668c14161ed7eb42639840 255 SUPERFAMILY SSF51735 10 249 2.6E-83 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS12570 f68f29741e668c14161ed7eb42639840 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 3.5E-8 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS12570 f68f29741e668c14161ed7eb42639840 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 3.5E-8 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS12570 f68f29741e668c14161ed7eb42639840 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 3.5E-8 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS12570 f68f29741e668c14161ed7eb42639840 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 6.9E-39 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS12570 f68f29741e668c14161ed7eb42639840 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 6.9E-39 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS12570 f68f29741e668c14161ed7eb42639840 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 6.9E-39 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS12570 f68f29741e668c14161ed7eb42639840 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 6.9E-39 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS12570 f68f29741e668c14161ed7eb42639840 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 6.9E-39 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS12570 f68f29741e668c14161ed7eb42639840 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 6.9E-39 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS12570 f68f29741e668c14161ed7eb42639840 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 249 6.8E-66 T 09-03-2017 RG43_RS12570 f68f29741e668c14161ed7eb42639840 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RG43_RS12570 f68f29741e668c14161ed7eb42639840 255 Gene3D G3DSA:3.40.50.720 6 249 2.5E-86 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS14430 031ff40361fd0ffeecb54227b92046e9 598 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 496 583 1.9E-11 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS14430 031ff40361fd0ffeecb54227b92046e9 598 SMART SM00304 176 228 1.4E-10 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RG43_RS14430 031ff40361fd0ffeecb54227b92046e9 598 Pfam PF00672 HAMP domain 160 224 8.1E-11 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RG43_RS14430 031ff40361fd0ffeecb54227b92046e9 598 Gene3D G3DSA:3.30.565.10 461 583 5.7E-13 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS14430 031ff40361fd0ffeecb54227b92046e9 598 SUPERFAMILY SSF158472 178 225 2.09E-5 T 09-03-2017 RG43_RS14430 031ff40361fd0ffeecb54227b92046e9 598 SMART SM00387 494 587 5.0E-15 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS14430 031ff40361fd0ffeecb54227b92046e9 598 PIRSF PIRSF003167 1 597 3.5E-196 T 09-03-2017 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 RG43_RS14430 031ff40361fd0ffeecb54227b92046e9 598 Pfam PF07730 Histidine kinase 390 453 2.0E-18 T 09-03-2017 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 RG43_RS14430 031ff40361fd0ffeecb54227b92046e9 598 SUPERFAMILY SSF55874 467 583 1.7E-19 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS14430 031ff40361fd0ffeecb54227b92046e9 598 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 35 130 1.6E-9 T 09-03-2017 IPR029095 NarX-like, N-terminal RG43_RS23410 77a2214441d4e8ddc38f8977d64de29c 69 Gene3D G3DSA:1.10.1470.10 1 68 6.7E-33 T 09-03-2017 IPR008462 CsbD-like RG43_RS23410 77a2214441d4e8ddc38f8977d64de29c 69 Pfam PF05532 CsbD-like 4 56 8.0E-22 T 09-03-2017 IPR008462 CsbD-like RG43_RS23410 77a2214441d4e8ddc38f8977d64de29c 69 SUPERFAMILY SSF69047 1 69 7.45E-28 T 09-03-2017 IPR008462 CsbD-like RG43_RS23410 77a2214441d4e8ddc38f8977d64de29c 69 PIRSF PIRSF039008 1 66 5.1E-32 T 09-03-2017 IPR026042 Stress response protein YjbJ RG43_RS03070 be9a89b705d157b2d7358a7f019fb0f8 644 Gene3D G3DSA:3.40.50.300 144 331 2.9E-65 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS03070 be9a89b705d157b2d7358a7f019fb0f8 644 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 188 320 5.2E-46 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 RG43_RS03070 be9a89b705d157b2d7358a7f019fb0f8 644 SMART SM00382 184 323 1.9E-26 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS03070 be9a89b705d157b2d7358a7f019fb0f8 644 Pfam PF01434 Peptidase family M41 382 591 8.2E-83 T 09-03-2017 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 RG43_RS03070 be9a89b705d157b2d7358a7f019fb0f8 644 ProSitePatterns PS00674 AAA-protein family signature. 291 309 - T 09-03-2017 IPR003960 ATPase, AAA-type, conserved site GO:0005524 RG43_RS03070 be9a89b705d157b2d7358a7f019fb0f8 644 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 612 37.49 T 09-03-2017 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 RG43_RS03070 be9a89b705d157b2d7358a7f019fb0f8 644 Pfam PF06480 FtsH Extracellular 5 93 1.5E-16 T 09-03-2017 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 RG43_RS03070 be9a89b705d157b2d7358a7f019fb0f8 644 SUPERFAMILY SSF52540 141 391 7.38E-73 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS03070 be9a89b705d157b2d7358a7f019fb0f8 644 Gene3D G3DSA:1.10.8.60 332 406 5.6E-29 T 09-03-2017 RG43_RS03070 be9a89b705d157b2d7358a7f019fb0f8 644 SUPERFAMILY SSF140990 402 602 3.79E-73 T 09-03-2017 RG43_RS03070 be9a89b705d157b2d7358a7f019fb0f8 644 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 100 593 3.7E-248 T 09-03-2017 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 RG43_RS16260 19794c02630a23e181c39ae0b681d32f 333 SUPERFAMILY SSF53383 1 331 1.06E-112 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS16260 19794c02630a23e181c39ae0b681d32f 333 Pfam PF01212 Beta-eliminating lyase 3 282 2.1E-96 T 09-03-2017 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 RG43_RS16260 19794c02630a23e181c39ae0b681d32f 333 Gene3D G3DSA:3.40.640.10 1 245 1.4E-87 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS16260 19794c02630a23e181c39ae0b681d32f 333 PIRSF PIRSF017617 1 333 2.2E-129 T 09-03-2017 IPR023603 Threonine aldolase RG43_RS16260 19794c02630a23e181c39ae0b681d32f 333 Gene3D G3DSA:3.90.1150.10 246 332 9.2E-25 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RG43_RS25070 8a2d9e50c5c8f8c6aa8d3d35d6818e19 274 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 64 78 - T 09-03-2017 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 RG43_RS25070 8a2d9e50c5c8f8c6aa8d3d35d6818e19 274 Gene3D G3DSA:3.10.310.10 1 120 4.8E-50 T 09-03-2017 RG43_RS25070 8a2d9e50c5c8f8c6aa8d3d35d6818e19 274 Gene3D G3DSA:3.10.310.10 121 262 9.3E-53 T 09-03-2017 RG43_RS25070 8a2d9e50c5c8f8c6aa8d3d35d6818e19 274 Pfam PF01678 Diaminopimelate epimerase 3 123 6.2E-35 T 09-03-2017 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 RG43_RS25070 8a2d9e50c5c8f8c6aa8d3d35d6818e19 274 Pfam PF01678 Diaminopimelate epimerase 152 267 4.6E-35 T 09-03-2017 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 RG43_RS25070 8a2d9e50c5c8f8c6aa8d3d35d6818e19 274 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 1 273 6.5E-105 T 09-03-2017 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 RG43_RS25070 8a2d9e50c5c8f8c6aa8d3d35d6818e19 274 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 1 274 39.819 T 09-03-2017 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 RG43_RS25070 8a2d9e50c5c8f8c6aa8d3d35d6818e19 274 SUPERFAMILY SSF54506 2 273 1.02E-56 T 09-03-2017 RG43_RS13785 c6b96ec1a57bf80423cedb62b641b8aa 353 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 54 341 2.8E-150 T 09-03-2017 IPR006507 Uncharacterised protein family UPF0283 RG43_RS13785 c6b96ec1a57bf80423cedb62b641b8aa 353 Hamap MF_01085 UPF0283 membrane protein YcjF [ycjF]. 4 347 39.251 T 09-03-2017 IPR006507 Uncharacterised protein family UPF0283 RG43_RS13785 c6b96ec1a57bf80423cedb62b641b8aa 353 Pfam PF05128 Domain of unknown function (DUF697) 183 341 1.4E-53 T 09-03-2017 IPR021147 Protein of unknown function DUF697 RG43_RS08250 7c98808571089f64ddc16a7cde6f37c4 300 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 9 295 3.1E-56 T 09-03-2017 IPR010106 Conserved hypothetical protein CHP01784 RG43_RS08250 7c98808571089f64ddc16a7cde6f37c4 300 Pfam PF04754 Putative transposase, YhgA-like 8 209 3.8E-89 T 09-03-2017 IPR006842 Transposase (putative), YhgA-like RG43_RS06745 81defb0721125f40ffe68900f52138f5 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 337 1.0E-13 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 RG43_RS06745 81defb0721125f40ffe68900f52138f5 857 Gene3D G3DSA:3.40.50.300 551 777 6.3E-59 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS06745 81defb0721125f40ffe68900f52138f5 857 Gene3D G3DSA:1.10.1780.10 1 147 2.7E-48 T 09-03-2017 IPR004176 Clp, N-terminal GO:0019538 RG43_RS06745 81defb0721125f40ffe68900f52138f5 857 SMART SM00382 597 752 1.5E-10 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS06745 81defb0721125f40ffe68900f52138f5 857 SMART SM00382 198 343 5.7E-13 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS06745 81defb0721125f40ffe68900f52138f5 857 SUPERFAMILY SSF52540 546 853 6.42E-87 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS06745 81defb0721125f40ffe68900f52138f5 857 Gene3D G3DSA:3.40.50.300 160 341 2.3E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS06745 81defb0721125f40ffe68900f52138f5 857 Gene3D G3DSA:1.10.8.60 778 855 2.4E-31 T 09-03-2017 RG43_RS06745 81defb0721125f40ffe68900f52138f5 857 SUPERFAMILY SSF52540 159 545 2.59E-99 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS06745 81defb0721125f40ffe68900f52138f5 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 09-03-2017 IPR028299 ClpA/B, conserved site 2 RG43_RS06745 81defb0721125f40ffe68900f52138f5 857 Gene3D G3DSA:1.10.8.60 343 427 5.3E-37 T 09-03-2017 RG43_RS06745 81defb0721125f40ffe68900f52138f5 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 1.0E-28 T 09-03-2017 IPR019489 Clp ATPase, C-terminal RG43_RS06745 81defb0721125f40ffe68900f52138f5 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 09-03-2017 IPR018368 ClpA/B, conserved site 1 GO:0005524 RG43_RS06745 81defb0721125f40ffe68900f52138f5 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 1.6E-42 T 09-03-2017 IPR001270 ClpA/B family GO:0005524 RG43_RS06745 81defb0721125f40ffe68900f52138f5 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 1.6E-42 T 09-03-2017 IPR001270 ClpA/B family GO:0005524 RG43_RS06745 81defb0721125f40ffe68900f52138f5 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 1.6E-42 T 09-03-2017 IPR001270 ClpA/B family GO:0005524 RG43_RS06745 81defb0721125f40ffe68900f52138f5 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 1.6E-42 T 09-03-2017 IPR001270 ClpA/B family GO:0005524 RG43_RS06745 81defb0721125f40ffe68900f52138f5 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 8.7E-13 T 09-03-2017 IPR004176 Clp, N-terminal GO:0019538 RG43_RS06745 81defb0721125f40ffe68900f52138f5 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 8.6E-13 T 09-03-2017 IPR004176 Clp, N-terminal GO:0019538 RG43_RS06745 81defb0721125f40ffe68900f52138f5 857 SMART SM01086 766 855 1.2E-37 T 09-03-2017 IPR019489 Clp ATPase, C-terminal RG43_RS06745 81defb0721125f40ffe68900f52138f5 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 760 7.9E-56 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 RG43_RS06745 81defb0721125f40ffe68900f52138f5 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 854 0.0 T 09-03-2017 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 RG43_RS06745 81defb0721125f40ffe68900f52138f5 857 SUPERFAMILY SSF81923 4 156 1.29E-42 T 09-03-2017 IPR004176 Clp, N-terminal GO:0019538 RG43_RS15225 3e40e9df3be6c55537066637f95dad0f 511 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 508 2.2E-180 T 09-03-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ RG43_RS15225 3e40e9df3be6c55537066637f95dad0f 511 Pfam PF03023 MviN-like protein 28 478 1.2E-162 T 09-03-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ RG43_RS15225 3e40e9df3be6c55537066637f95dad0f 511 PRINTS PR01806 Virulence factor MviN signature 33 52 2.2E-87 T 09-03-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ RG43_RS15225 3e40e9df3be6c55537066637f95dad0f 511 PRINTS PR01806 Virulence factor MviN signature 52 68 2.2E-87 T 09-03-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ RG43_RS15225 3e40e9df3be6c55537066637f95dad0f 511 PRINTS PR01806 Virulence factor MviN signature 157 178 2.2E-87 T 09-03-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ RG43_RS15225 3e40e9df3be6c55537066637f95dad0f 511 PRINTS PR01806 Virulence factor MviN signature 259 285 2.2E-87 T 09-03-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ RG43_RS15225 3e40e9df3be6c55537066637f95dad0f 511 PRINTS PR01806 Virulence factor MviN signature 409 426 2.2E-87 T 09-03-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ RG43_RS15225 3e40e9df3be6c55537066637f95dad0f 511 PRINTS PR01806 Virulence factor MviN signature 357 376 2.2E-87 T 09-03-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ RG43_RS15225 3e40e9df3be6c55537066637f95dad0f 511 PRINTS PR01806 Virulence factor MviN signature 133 157 2.2E-87 T 09-03-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ RG43_RS15225 3e40e9df3be6c55537066637f95dad0f 511 PIRSF PIRSF002869 1 511 9.2E-184 T 09-03-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ RG43_RS16150 4abd4023b5945e3da89ff7fb77fc14e0 321 Gene3D G3DSA:3.50.50.60 111 308 3.0E-35 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS16150 4abd4023b5945e3da89ff7fb77fc14e0 321 Gene3D G3DSA:3.50.50.60 4 110 1.0E-35 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS16150 4abd4023b5945e3da89ff7fb77fc14e0 321 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 314 2.9E-125 T 09-03-2017 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 RG43_RS16150 4abd4023b5945e3da89ff7fb77fc14e0 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 2.5E-78 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RG43_RS16150 4abd4023b5945e3da89ff7fb77fc14e0 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 277 295 2.5E-78 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RG43_RS16150 4abd4023b5945e3da89ff7fb77fc14e0 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 2.5E-78 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RG43_RS16150 4abd4023b5945e3da89ff7fb77fc14e0 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 2.5E-78 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RG43_RS16150 4abd4023b5945e3da89ff7fb77fc14e0 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 2.5E-78 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RG43_RS16150 4abd4023b5945e3da89ff7fb77fc14e0 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 239 260 2.5E-78 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RG43_RS16150 4abd4023b5945e3da89ff7fb77fc14e0 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 2.5E-78 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RG43_RS16150 4abd4023b5945e3da89ff7fb77fc14e0 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 2.5E-78 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RG43_RS16150 4abd4023b5945e3da89ff7fb77fc14e0 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 2.5E-78 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RG43_RS16150 4abd4023b5945e3da89ff7fb77fc14e0 321 SUPERFAMILY SSF51905 2 315 3.79E-53 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS16150 4abd4023b5945e3da89ff7fb77fc14e0 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 267 289 4.3E-41 T 09-03-2017 RG43_RS16150 4abd4023b5945e3da89ff7fb77fc14e0 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 4.3E-41 T 09-03-2017 RG43_RS16150 4abd4023b5945e3da89ff7fb77fc14e0 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 4.3E-41 T 09-03-2017 RG43_RS16150 4abd4023b5945e3da89ff7fb77fc14e0 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 253 4.3E-41 T 09-03-2017 RG43_RS16150 4abd4023b5945e3da89ff7fb77fc14e0 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 4.3E-41 T 09-03-2017 RG43_RS16150 4abd4023b5945e3da89ff7fb77fc14e0 321 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 09-03-2017 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 RG43_RS16150 4abd4023b5945e3da89ff7fb77fc14e0 321 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 301 8.9E-52 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS12370 ce422a1e705d91080141d9bb318b50ce 193 PIRSF PIRSF000349 1 193 1.7E-87 T 09-03-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 RG43_RS12370 ce422a1e705d91080141d9bb318b50ce 193 SUPERFAMILY SSF54719 84 192 2.23E-45 T 09-03-2017 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 RG43_RS12370 ce422a1e705d91080141d9bb318b50ce 193 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 189 2.1E-40 T 09-03-2017 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 RG43_RS12370 ce422a1e705d91080141d9bb318b50ce 193 SUPERFAMILY SSF46609 1 84 1.22E-36 T 09-03-2017 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 RG43_RS12370 ce422a1e705d91080141d9bb318b50ce 193 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 09-03-2017 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 RG43_RS12370 ce422a1e705d91080141d9bb318b50ce 193 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 82 1.5E-35 T 09-03-2017 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 RG43_RS12370 ce422a1e705d91080141d9bb318b50ce 193 Gene3D G3DSA:1.10.287.990 20 82 3.4E-26 T 09-03-2017 RG43_RS12370 ce422a1e705d91080141d9bb318b50ce 193 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 2.2E-22 T 09-03-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 RG43_RS12370 ce422a1e705d91080141d9bb318b50ce 193 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 2.2E-22 T 09-03-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 RG43_RS12370 ce422a1e705d91080141d9bb318b50ce 193 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 2.2E-22 T 09-03-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 RG43_RS12370 ce422a1e705d91080141d9bb318b50ce 193 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 2.2E-22 T 09-03-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 RG43_RS12370 ce422a1e705d91080141d9bb318b50ce 193 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 2.2E-22 T 09-03-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 RG43_RS02805 e2842633a160250aea968b948d3c8404 355 Gene3D G3DSA:2.30.42.10 259 353 1.0E-26 T 09-03-2017 IPR001478 PDZ domain GO:0005515 RG43_RS02805 e2842633a160250aea968b948d3c8404 355 SUPERFAMILY SSF50156 256 352 7.76E-21 T 09-03-2017 IPR001478 PDZ domain GO:0005515 RG43_RS02805 e2842633a160250aea968b948d3c8404 355 PRINTS PR00834 HtrA/DegQ protease family signature 151 175 7.9E-48 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RG43_RS02805 e2842633a160250aea968b948d3c8404 355 PRINTS PR00834 HtrA/DegQ protease family signature 208 225 7.9E-48 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RG43_RS02805 e2842633a160250aea968b948d3c8404 355 PRINTS PR00834 HtrA/DegQ protease family signature 186 203 7.9E-48 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RG43_RS02805 e2842633a160250aea968b948d3c8404 355 PRINTS PR00834 HtrA/DegQ protease family signature 297 309 7.9E-48 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RG43_RS02805 e2842633a160250aea968b948d3c8404 355 PRINTS PR00834 HtrA/DegQ protease family signature 89 101 7.9E-48 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RG43_RS02805 e2842633a160250aea968b948d3c8404 355 PRINTS PR00834 HtrA/DegQ protease family signature 110 130 7.9E-48 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RG43_RS02805 e2842633a160250aea968b948d3c8404 355 Gene3D G3DSA:2.40.10.10 149 258 1.5E-38 T 09-03-2017 RG43_RS02805 e2842633a160250aea968b948d3c8404 355 Gene3D G3DSA:2.40.10.10 34 138 1.9E-31 T 09-03-2017 RG43_RS02805 e2842633a160250aea968b948d3c8404 355 Pfam PF13365 Trypsin-like peptidase domain 80 215 6.3E-29 T 09-03-2017 RG43_RS02805 e2842633a160250aea968b948d3c8404 355 SUPERFAMILY SSF50494 47 254 7.81E-61 T 09-03-2017 IPR009003 Peptidase S1, PA clan RG43_RS02805 e2842633a160250aea968b948d3c8404 355 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 2 352 2.9E-182 T 09-03-2017 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 RG43_RS02805 e2842633a160250aea968b948d3c8404 355 Pfam PF13180 PDZ domain 279 347 5.3E-13 T 09-03-2017 IPR001478 PDZ domain GO:0005515 RG43_RS02805 e2842633a160250aea968b948d3c8404 355 SMART SM00228 257 339 1.9E-11 T 09-03-2017 IPR001478 PDZ domain GO:0005515 RG43_RS02205 b4a3e60675bfed276dbba91f2d692450 601 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 283 4.0E-94 T 09-03-2017 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 RG43_RS02205 b4a3e60675bfed276dbba91f2d692450 601 Pfam PF00999 Sodium/hydrogen exchanger family 11 373 2.5E-68 T 09-03-2017 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 RG43_RS02205 b4a3e60675bfed276dbba91f2d692450 601 SUPERFAMILY SSF51735 402 529 1.69E-29 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS02205 b4a3e60675bfed276dbba91f2d692450 601 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 2 598 47.437 T 09-03-2017 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 RG43_RS02205 b4a3e60675bfed276dbba91f2d692450 601 Pfam PF02254 TrkA-N domain 403 514 9.4E-25 T 09-03-2017 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 RG43_RS02205 b4a3e60675bfed276dbba91f2d692450 601 Gene3D G3DSA:3.40.50.720 395 531 9.8E-39 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS20795 669fbaeb7c132e9ec0877ed09360713f 472 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 31 467 38.846 T 09-03-2017 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 RG43_RS20795 669fbaeb7c132e9ec0877ed09360713f 472 Gene3D G3DSA:1.10.3090.10 200 434 7.9E-52 T 09-03-2017 RG43_RS20795 669fbaeb7c132e9ec0877ed09360713f 472 Pfam PF12626 Polymerase A arginine-rich C-terminus 345 463 1.6E-40 T 09-03-2017 IPR025866 Polymerase A arginine-rich C-terminal domain RG43_RS20795 669fbaeb7c132e9ec0877ed09360713f 472 Gene3D G3DSA:3.30.460.10 51 199 6.6E-51 T 09-03-2017 RG43_RS20795 669fbaeb7c132e9ec0877ed09360713f 472 Pfam PF01743 Poly A polymerase head domain 69 200 1.1E-39 T 09-03-2017 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 RG43_RS20795 669fbaeb7c132e9ec0877ed09360713f 472 SUPERFAMILY SSF81301 41 196 2.29E-40 T 09-03-2017 RG43_RS20795 669fbaeb7c132e9ec0877ed09360713f 472 SUPERFAMILY SSF81891 198 436 2.22E-52 T 09-03-2017 RG43_RS20795 669fbaeb7c132e9ec0877ed09360713f 472 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 38 465 1.5E-157 T 09-03-2017 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 RG43_RS20795 669fbaeb7c132e9ec0877ed09360713f 472 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 227 288 1.6E-20 T 09-03-2017 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 RG43_RS12040 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 Pfam PF01632 Ribosomal protein L35 2 60 2.3E-22 T 09-03-2017 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS12040 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 1.2E-26 T 09-03-2017 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RG43_RS12040 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.841 T 09-03-2017 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RG43_RS12040 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 1.1E-22 T 09-03-2017 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RG43_RS12040 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.1E-22 T 09-03-2017 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RG43_RS12040 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 1.1E-22 T 09-03-2017 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RG43_RS12040 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 SUPERFAMILY SSF143034 2 64 3.01E-22 T 09-03-2017 RG43_RS12040 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 09-03-2017 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS07180 da878c7653a0d31d749ac00b1c9626d2 770 Gene3D G3DSA:3.40.710.10 230 616 4.5E-72 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like RG43_RS07180 da878c7653a0d31d749ac00b1c9626d2 770 SUPERFAMILY SSF53955 39 258 1.69E-65 T 09-03-2017 IPR023346 Lysozyme-like domain RG43_RS07180 da878c7653a0d31d749ac00b1c9626d2 770 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 686 767 3.7E-17 T 09-03-2017 IPR009647 Penicillin-binding, C-terminal RG43_RS07180 da878c7653a0d31d749ac00b1c9626d2 770 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 37 770 1.9E-275 T 09-03-2017 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 RG43_RS07180 da878c7653a0d31d749ac00b1c9626d2 770 Pfam PF00912 Transglycosylase 61 226 3.1E-51 T 09-03-2017 IPR001264 Glycosyl transferase, family 51 RG43_RS07180 da878c7653a0d31d749ac00b1c9626d2 770 Gene3D G3DSA:1.10.3810.10 59 229 3.6E-54 T 09-03-2017 RG43_RS07180 da878c7653a0d31d749ac00b1c9626d2 770 Pfam PF00905 Penicillin binding protein transpeptidase domain 330 519 2.7E-10 T 09-03-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RG43_RS07180 da878c7653a0d31d749ac00b1c9626d2 770 SUPERFAMILY SSF56601 208 638 2.71E-91 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like RG43_RS10435 0ebd36f0bef7e0681aff5a150a14710a 216 Pfam PF04586 Caudovirus prohead serine protease 12 160 7.3E-34 T 09-03-2017 IPR006433 Prohead protease RG43_RS10435 0ebd36f0bef7e0681aff5a150a14710a 216 TIGRFAM TIGR01543 proheadase_HK97: phage prohead protease, HK97 family 20 159 4.6E-47 T 09-03-2017 IPR006433 Prohead protease RG43_RS10435 0ebd36f0bef7e0681aff5a150a14710a 216 SUPERFAMILY SSF50789 24 145 2.11E-5 T 09-03-2017 RG43_RS06980 a4f0134f8461732c9349219fcd18f3ee 396 SUPERFAMILY SSF46458 1 142 3.49E-38 T 09-03-2017 IPR009050 Globin-like RG43_RS06980 a4f0134f8461732c9349219fcd18f3ee 396 SUPERFAMILY SSF52343 255 394 8.51E-37 T 09-03-2017 RG43_RS06980 a4f0134f8461732c9349219fcd18f3ee 396 Gene3D G3DSA:2.40.30.10 149 254 7.8E-33 T 09-03-2017 RG43_RS06980 a4f0134f8461732c9349219fcd18f3ee 396 Hamap MF_01252 Flavohemoprotein [hmp]. 1 396 57.571 T 09-03-2017 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 RG43_RS06980 a4f0134f8461732c9349219fcd18f3ee 396 Pfam PF00042 Globin 7 103 7.3E-15 T 09-03-2017 IPR000971 Globin GO:0019825|GO:0020037 RG43_RS06980 a4f0134f8461732c9349219fcd18f3ee 396 SUPERFAMILY SSF63380 148 253 4.43E-29 T 09-03-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RG43_RS06980 a4f0134f8461732c9349219fcd18f3ee 396 Gene3D G3DSA:1.10.490.10 2 140 1.6E-54 T 09-03-2017 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 RG43_RS06980 a4f0134f8461732c9349219fcd18f3ee 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 256 5.2E-6 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 RG43_RS06980 a4f0134f8461732c9349219fcd18f3ee 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 183 195 5.2E-6 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 RG43_RS06980 a4f0134f8461732c9349219fcd18f3ee 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 5.2E-6 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 RG43_RS06980 a4f0134f8461732c9349219fcd18f3ee 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 358 366 5.2E-6 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 RG43_RS06980 a4f0134f8461732c9349219fcd18f3ee 396 Gene3D G3DSA:3.40.50.80 258 394 5.6E-35 T 09-03-2017 RG43_RS06980 a4f0134f8461732c9349219fcd18f3ee 396 Pfam PF00175 Oxidoreductase NAD-binding domain 264 372 7.9E-16 T 09-03-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 RG43_RS06980 a4f0134f8461732c9349219fcd18f3ee 396 Pfam PF00970 Oxidoreductase FAD-binding domain 157 252 2.3E-9 T 09-03-2017 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 RG43_RS08840 050e85c2c0280cdc84a4e429da1237a5 586 SUPERFAMILY SSF53649 257 570 8.64E-54 T 09-03-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RG43_RS08840 050e85c2c0280cdc84a4e429da1237a5 586 PIRSF PIRSF004950 6 586 2.8E-223 T 09-03-2017 IPR012159 Inner membrane protein YejM RG43_RS08840 050e85c2c0280cdc84a4e429da1237a5 586 Pfam PF11893 Domain of unknown function (DUF3413) 6 252 4.0E-106 T 09-03-2017 IPR024588 Inner membrane protein YejM, N-terminal RG43_RS08840 050e85c2c0280cdc84a4e429da1237a5 586 Gene3D G3DSA:3.40.720.10 261 520 5.2E-32 T 09-03-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RG43_RS08840 050e85c2c0280cdc84a4e429da1237a5 586 Pfam PF00884 Sulfatase 260 500 1.7E-32 T 09-03-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RG43_RS07535 5c0680280a502ea0351daec359f74796 219 Pfam PF00936 BMC domain 36 107 3.1E-11 T 09-03-2017 IPR000249 Microcompartment protein, bacteria RG43_RS07535 5c0680280a502ea0351daec359f74796 219 Pfam PF00936 BMC domain 160 208 1.9E-6 T 09-03-2017 IPR000249 Microcompartment protein, bacteria RG43_RS07535 5c0680280a502ea0351daec359f74796 219 TIGRFAM TIGR04502 microcomp_EutL: microcompartment protein EutL 6 217 3.5E-101 T 09-03-2017 IPR030983 Ethanolamine utilization protein EutL GO:0005198 RG43_RS07535 5c0680280a502ea0351daec359f74796 219 PIRSF PIRSF012290 1 219 3.2E-85 T 09-03-2017 IPR009193 Polyhedral organelle shell protein, EutL/PduB type GO:0009605 RG43_RS07535 5c0680280a502ea0351daec359f74796 219 SUPERFAMILY SSF143414 158 211 6.15E-6 T 09-03-2017 RG43_RS07535 5c0680280a502ea0351daec359f74796 219 SMART SM00877 146 219 2.9E-7 T 09-03-2017 IPR000249 Microcompartment protein, bacteria RG43_RS07535 5c0680280a502ea0351daec359f74796 219 SMART SM00877 35 132 5.2E-4 T 09-03-2017 IPR000249 Microcompartment protein, bacteria RG43_RS19585 7f2b3f4fee8de00f415f7d64d11b927a 80 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 69 8.7E-12 T 09-03-2017 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 RG43_RS19585 7f2b3f4fee8de00f415f7d64d11b927a 80 SUPERFAMILY SSF51395 7 71 2.43E-15 T 09-03-2017 RG43_RS19585 7f2b3f4fee8de00f415f7d64d11b927a 80 Gene3D G3DSA:3.20.20.70 7 69 3.9E-17 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS01250 e59dc783a0171dddec53198ad4db2d79 242 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 188 230 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RG43_RS01250 e59dc783a0171dddec53198ad4db2d79 242 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 203 218 9.3E-7 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RG43_RS01250 e59dc783a0171dddec53198ad4db2d79 242 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 218 234 9.3E-7 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RG43_RS01250 e59dc783a0171dddec53198ad4db2d79 242 SUPERFAMILY SSF46689 188 236 4.93E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS01250 e59dc783a0171dddec53198ad4db2d79 242 Pfam PF12833 Helix-turn-helix domain 158 235 2.8E-12 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS01250 e59dc783a0171dddec53198ad4db2d79 242 Gene3D G3DSA:1.10.10.60 189 235 1.7E-15 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS01250 e59dc783a0171dddec53198ad4db2d79 242 SMART SM00342 152 234 1.6E-26 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS02375 75dc389130382ce3a8c6078ff4f868d1 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.549 T 09-03-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02375 75dc389130382ce3a8c6078ff4f868d1 92 Gene3D G3DSA:3.30.860.10 1 91 8.0E-41 T 09-03-2017 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02375 75dc389130382ce3a8c6078ff4f868d1 92 PIRSF PIRSF002144 1 92 1.7E-31 T 09-03-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02375 75dc389130382ce3a8c6078ff4f868d1 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 8.6E-46 T 09-03-2017 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 RG43_RS02375 75dc389130382ce3a8c6078ff4f868d1 92 Pfam PF00203 Ribosomal protein S19 3 83 2.3E-36 T 09-03-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02375 75dc389130382ce3a8c6078ff4f868d1 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 09-03-2017 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02375 75dc389130382ce3a8c6078ff4f868d1 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 4.1E-25 T 09-03-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02375 75dc389130382ce3a8c6078ff4f868d1 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 4.1E-25 T 09-03-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02375 75dc389130382ce3a8c6078ff4f868d1 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 4.1E-25 T 09-03-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02375 75dc389130382ce3a8c6078ff4f868d1 92 SUPERFAMILY SSF54570 3 84 2.75E-35 T 09-03-2017 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS07825 c15c3ab0cc33e7dfd838cb7169d0d62d 831 Gene3D G3DSA:1.10.274.10 151 238 1.0E-18 T 09-03-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RG43_RS07825 c15c3ab0cc33e7dfd838cb7169d0d62d 831 Gene3D G3DSA:3.40.930.10 682 827 3.4E-41 T 09-03-2017 IPR002178 PTS EIIA type-2 domain RG43_RS07825 c15c3ab0cc33e7dfd838cb7169d0d62d 831 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 687 812 5.5E-41 T 09-03-2017 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 RG43_RS07825 c15c3ab0cc33e7dfd838cb7169d0d62d 831 SUPERFAMILY SSF47831 149 247 2.62E-16 T 09-03-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RG43_RS07825 c15c3ab0cc33e7dfd838cb7169d0d62d 831 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 573 588 9.1E-24 T 09-03-2017 RG43_RS07825 c15c3ab0cc33e7dfd838cb7169d0d62d 831 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 609 621 9.1E-24 T 09-03-2017 RG43_RS07825 c15c3ab0cc33e7dfd838cb7169d0d62d 831 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 402 421 9.1E-24 T 09-03-2017 RG43_RS07825 c15c3ab0cc33e7dfd838cb7169d0d62d 831 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 556 571 9.1E-24 T 09-03-2017 RG43_RS07825 c15c3ab0cc33e7dfd838cb7169d0d62d 831 Pfam PF00381 PTS HPr component phosphorylation site 8 83 9.8E-12 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like RG43_RS07825 c15c3ab0cc33e7dfd838cb7169d0d62d 831 Pfam PF05524 PEP-utilising enzyme, N-terminal 119 234 5.9E-12 T 09-03-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RG43_RS07825 c15c3ab0cc33e7dfd838cb7169d0d62d 831 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 119 674 1.0E-151 T 09-03-2017 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 RG43_RS07825 c15c3ab0cc33e7dfd838cb7169d0d62d 831 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 556 574 - T 09-03-2017 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 RG43_RS07825 c15c3ab0cc33e7dfd838cb7169d0d62d 831 Pfam PF00391 PEP-utilising enzyme, mobile domain 262 334 4.8E-14 T 09-03-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RG43_RS07825 c15c3ab0cc33e7dfd838cb7169d0d62d 831 Gene3D G3DSA:3.50.30.10 239 362 1.2E-24 T 09-03-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RG43_RS07825 c15c3ab0cc33e7dfd838cb7169d0d62d 831 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 360 650 6.9E-107 T 09-03-2017 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 RG43_RS07825 c15c3ab0cc33e7dfd838cb7169d0d62d 831 Gene3D G3DSA:3.20.20.60 363 679 5.1E-106 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RG43_RS07825 c15c3ab0cc33e7dfd838cb7169d0d62d 831 Gene3D G3DSA:3.30.1340.10 1 87 7.4E-21 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like RG43_RS07825 c15c3ab0cc33e7dfd838cb7169d0d62d 831 SUPERFAMILY SSF55594 1 86 2.36E-16 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like RG43_RS07825 c15c3ab0cc33e7dfd838cb7169d0d62d 831 SUPERFAMILY SSF55804 685 826 3.53E-30 T 09-03-2017 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 RG43_RS07825 c15c3ab0cc33e7dfd838cb7169d0d62d 831 SUPERFAMILY SSF51621 359 658 1.75E-101 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RG43_RS07825 c15c3ab0cc33e7dfd838cb7169d0d62d 831 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 687 826 6.0E-32 T 09-03-2017 IPR002178 PTS EIIA type-2 domain RG43_RS07825 c15c3ab0cc33e7dfd838cb7169d0d62d 831 SUPERFAMILY SSF52009 233 349 4.19E-20 T 09-03-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RG43_RS15985 3653c35203ad23d3480bf822b6fc6665 261 Pfam PF13847 Methyltransferase domain 45 151 1.2E-18 T 09-03-2017 IPR025714 Methyltransferase domain RG43_RS15985 3653c35203ad23d3480bf822b6fc6665 261 SUPERFAMILY SSF53335 6 241 5.63E-43 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS15985 3653c35203ad23d3480bf822b6fc6665 261 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 2 255 43.95 T 09-03-2017 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 RG43_RS15985 3653c35203ad23d3480bf822b6fc6665 261 Gene3D G3DSA:3.40.50.150 5 243 3.7E-38 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS23460 dc2c874d2238d2b5ce4668687e9b483e 446 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 32 442 0.0 T 09-03-2017 IPR003192 Porin, LamB type GO:0006810|GO:0016020 RG43_RS23460 dc2c874d2238d2b5ce4668687e9b483e 446 SUPERFAMILY SSF56935 26 446 1.53E-153 T 09-03-2017 RG43_RS23460 dc2c874d2238d2b5ce4668687e9b483e 446 Pfam PF02264 LamB porin 28 446 2.6E-145 T 09-03-2017 IPR003192 Porin, LamB type GO:0006810|GO:0016020 RG43_RS23460 dc2c874d2238d2b5ce4668687e9b483e 446 Gene3D G3DSA:2.40.170.10 26 446 5.1E-175 T 09-03-2017 IPR003192 Porin, LamB type GO:0006810|GO:0016020 RG43_RS23460 dc2c874d2238d2b5ce4668687e9b483e 446 Hamap MF_01301 Maltoporin [lamB]. 4 446 44.865 T 09-03-2017 IPR023738 Maltoporin GO:0009279|GO:0015481|GO:0015768|GO:0042956|GO:0042958 RG43_RS22775 8c0cfc4f8bf75a6ded80867de0fb1a52 377 Pfam PF00144 Beta-lactamase 30 375 5.3E-89 T 09-03-2017 IPR001466 Beta-lactamase-related RG43_RS22775 8c0cfc4f8bf75a6ded80867de0fb1a52 377 ProSitePatterns PS00336 Beta-lactamase class-C active site. 76 83 - T 09-03-2017 IPR001586 Beta-lactamase, class-C active site GO:0008800|GO:0017001|GO:0030288 KEGG: 00311+3.5.2.6 RG43_RS22775 8c0cfc4f8bf75a6ded80867de0fb1a52 377 SUPERFAMILY SSF56601 22 376 1.04E-105 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like RG43_RS22775 8c0cfc4f8bf75a6ded80867de0fb1a52 377 Gene3D G3DSA:3.40.710.10 22 376 1.3E-97 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like RG43_RS04735 bcdd2d2f6fcc205f84f19137d3af8226 207 SUPERFAMILY SSF46689 5 67 2.69E-14 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS04735 bcdd2d2f6fcc205f84f19137d3af8226 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 55 6.7E-12 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RG43_RS04735 bcdd2d2f6fcc205f84f19137d3af8226 207 Gene3D G3DSA:1.10.357.10 61 202 1.9E-49 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RG43_RS04735 bcdd2d2f6fcc205f84f19137d3af8226 207 Gene3D G3DSA:1.10.10.60 2 60 6.1E-22 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS04735 bcdd2d2f6fcc205f84f19137d3af8226 207 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 68 201 1.4E-46 T 09-03-2017 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 RG43_RS04735 bcdd2d2f6fcc205f84f19137d3af8226 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 5.2E-9 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RG43_RS04735 bcdd2d2f6fcc205f84f19137d3af8226 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 5.2E-9 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RG43_RS04735 bcdd2d2f6fcc205f84f19137d3af8226 207 ProSitePatterns PS01081 TetR-type HTH domain signature. 21 52 - T 09-03-2017 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RG43_RS04735 bcdd2d2f6fcc205f84f19137d3af8226 207 PRINTS PR00400 Tetracycline repressor protein signature 183 197 8.7E-55 T 09-03-2017 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 RG43_RS04735 bcdd2d2f6fcc205f84f19137d3af8226 207 PRINTS PR00400 Tetracycline repressor protein signature 21 44 8.7E-55 T 09-03-2017 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 RG43_RS04735 bcdd2d2f6fcc205f84f19137d3af8226 207 PRINTS PR00400 Tetracycline repressor protein signature 95 118 8.7E-55 T 09-03-2017 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 RG43_RS04735 bcdd2d2f6fcc205f84f19137d3af8226 207 PRINTS PR00400 Tetracycline repressor protein signature 75 94 8.7E-55 T 09-03-2017 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 RG43_RS04735 bcdd2d2f6fcc205f84f19137d3af8226 207 PRINTS PR00400 Tetracycline repressor protein signature 130 149 8.7E-55 T 09-03-2017 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 RG43_RS04735 bcdd2d2f6fcc205f84f19137d3af8226 207 SUPERFAMILY SSF48498 69 204 2.22E-38 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RG43_RS15680 bb0355a8b215234a3a62acbaac8d94f8 726 SUPERFAMILY SSF52540 532 710 1.33E-35 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS15680 bb0355a8b215234a3a62acbaac8d94f8 726 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 513 719 2.1E-48 T 09-03-2017 IPR005702 Exopolysaccharide synthesis protein GO:0045226 RG43_RS15680 bb0355a8b215234a3a62acbaac8d94f8 726 Pfam PF02706 Chain length determinant protein 16 252 8.1E-52 T 09-03-2017 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 RG43_RS15680 bb0355a8b215234a3a62acbaac8d94f8 726 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 535 659 2.1E-9 T 09-03-2017 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RG43_RS15680 bb0355a8b215234a3a62acbaac8d94f8 726 Pfam PF13807 G-rich domain on putative tyrosine kinase 367 448 3.5E-33 T 09-03-2017 IPR032807 Tyrosine kinase, G-rich domain RG43_RS15680 bb0355a8b215234a3a62acbaac8d94f8 726 Gene3D G3DSA:3.40.50.300 532 708 1.0E-30 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS18755 0ce7f893509a7837265fa7f30b2e7b28 181 SUPERFAMILY SSF54909 91 180 1.17E-20 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel RG43_RS18755 0ce7f893509a7837265fa7f30b2e7b28 181 SUPERFAMILY SSF46785 30 90 1.85E-15 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS18755 0ce7f893509a7837265fa7f30b2e7b28 181 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 58 77 1.9E-10 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RG43_RS18755 0ce7f893509a7837265fa7f30b2e7b28 181 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 47 1.9E-10 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RG43_RS18755 0ce7f893509a7837265fa7f30b2e7b28 181 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 47 58 1.9E-10 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RG43_RS18755 0ce7f893509a7837265fa7f30b2e7b28 181 Gene3D G3DSA:1.10.10.10 32 83 1.1E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS18755 0ce7f893509a7837265fa7f30b2e7b28 181 SMART SM00344 31 140 1.2E-37 T 09-03-2017 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 RG43_RS18755 0ce7f893509a7837265fa7f30b2e7b28 181 Pfam PF13404 AsnC-type helix-turn-helix domain 31 72 1.3E-16 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RG43_RS18755 0ce7f893509a7837265fa7f30b2e7b28 181 ProSitePatterns PS00519 AsnC-type HTH domain signature. 49 75 - T 09-03-2017 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RG43_RS18755 0ce7f893509a7837265fa7f30b2e7b28 181 Pfam PF01037 Lrp/AsnC ligand binding domain 97 171 1.1E-21 T 09-03-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RG43_RS18755 0ce7f893509a7837265fa7f30b2e7b28 181 Gene3D G3DSA:3.30.70.920 84 168 1.2E-30 T 09-03-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RG43_RS23510 5a77720a59e5055bd35c6e036d83bda2 212 SUPERFAMILY SSF159270 20 208 1.96E-56 T 09-03-2017 IPR023373 YmcC-like domain RG43_RS23510 5a77720a59e5055bd35c6e036d83bda2 212 Gene3D G3DSA:2.40.360.10 16 211 6.1E-81 T 09-03-2017 IPR023373 YmcC-like domain RG43_RS23510 5a77720a59e5055bd35c6e036d83bda2 212 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 13 206 8.1E-62 T 09-03-2017 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB RG43_RS07600 016065b18cf4df19503ee7316d8497e9 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 254 8.7E-72 T 09-03-2017 RG43_RS07600 016065b18cf4df19503ee7316d8497e9 263 SUPERFAMILY SSF51735 6 255 2.29E-86 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS07600 016065b18cf4df19503ee7316d8497e9 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 3.9E-13 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS07600 016065b18cf4df19503ee7316d8497e9 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 3.9E-13 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS07600 016065b18cf4df19503ee7316d8497e9 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 3.9E-13 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS07600 016065b18cf4df19503ee7316d8497e9 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 4.3E-45 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS07600 016065b18cf4df19503ee7316d8497e9 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 4.3E-45 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS07600 016065b18cf4df19503ee7316d8497e9 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 4.3E-45 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS07600 016065b18cf4df19503ee7316d8497e9 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 4.3E-45 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS07600 016065b18cf4df19503ee7316d8497e9 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.3E-45 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS07600 016065b18cf4df19503ee7316d8497e9 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 4.3E-45 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS07600 016065b18cf4df19503ee7316d8497e9 263 Gene3D G3DSA:3.40.50.720 1 254 1.1E-91 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS07600 016065b18cf4df19503ee7316d8497e9 263 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 191 1.6E-4 T 09-03-2017 RG43_RS06665 c07d27980fe1955e3a121e88359a12bc 182 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 14 182 8.9E-63 T 09-03-2017 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 RG43_RS06665 c07d27980fe1955e3a121e88359a12bc 182 Gene3D G3DSA:2.30.30.240 106 182 2.8E-29 T 09-03-2017 RG43_RS06665 c07d27980fe1955e3a121e88359a12bc 182 Pfam PF05239 PRC-barrel domain 104 177 1.7E-9 T 09-03-2017 IPR027275 PRC-barrel domain RG43_RS06665 c07d27980fe1955e3a121e88359a12bc 182 Gene3D G3DSA:2.40.30.60 6 100 1.3E-36 T 09-03-2017 IPR002676 RimM protein GO:0006364 RG43_RS06665 c07d27980fe1955e3a121e88359a12bc 182 SUPERFAMILY SSF50447 12 100 4.59E-25 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain RG43_RS06665 c07d27980fe1955e3a121e88359a12bc 182 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 13 182 24.865 T 09-03-2017 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 RG43_RS06665 c07d27980fe1955e3a121e88359a12bc 182 Pfam PF01782 RimM N-terminal domain 16 97 6.6E-27 T 09-03-2017 IPR002676 RimM protein GO:0006364 RG43_RS06665 c07d27980fe1955e3a121e88359a12bc 182 SUPERFAMILY SSF50346 106 182 1.63E-19 T 09-03-2017 IPR011033 PRC-barrel-like RG43_RS05120 e0183ec78b17e4f81371cbead6b912d1 339 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 4 328 3.0E-199 T 09-03-2017 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 RG43_RS05120 e0183ec78b17e4f81371cbead6b912d1 339 SUPERFAMILY SSF55347 155 317 1.13E-57 T 09-03-2017 RG43_RS05120 e0183ec78b17e4f81371cbead6b912d1 339 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 155 2.4E-54 T 09-03-2017 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS05120 e0183ec78b17e4f81371cbead6b912d1 339 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 153 160 - T 09-03-2017 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS05120 e0183ec78b17e4f81371cbead6b912d1 339 Gene3D G3DSA:3.40.50.720 1 163 6.4E-67 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS05120 e0183ec78b17e4f81371cbead6b912d1 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 176 192 5.4E-30 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS05120 e0183ec78b17e4f81371cbead6b912d1 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 149 167 5.4E-30 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS05120 e0183ec78b17e4f81371cbead6b912d1 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 272 287 5.4E-30 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS05120 e0183ec78b17e4f81371cbead6b912d1 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 5.4E-30 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS05120 e0183ec78b17e4f81371cbead6b912d1 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 232 249 5.4E-30 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS05120 e0183ec78b17e4f81371cbead6b912d1 339 SMART SM00846 3 155 3.5E-83 T 09-03-2017 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS05120 e0183ec78b17e4f81371cbead6b912d1 339 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 2 337 66.378 T 09-03-2017 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 RG43_RS05120 e0183ec78b17e4f81371cbead6b912d1 339 Gene3D G3DSA:3.30.360.10 164 318 1.7E-61 T 09-03-2017 RG43_RS05120 e0183ec78b17e4f81371cbead6b912d1 339 PIRSF PIRSF000149 1 338 3.1E-135 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS05120 e0183ec78b17e4f81371cbead6b912d1 339 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 160 316 2.2E-54 T 09-03-2017 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS05120 e0183ec78b17e4f81371cbead6b912d1 339 SUPERFAMILY SSF51735 1 179 5.34E-57 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS06205 c3494179e791e49669b5cb9f27f12431 853 SUPERFAMILY SSF53150 117 269 1.57E-42 T 09-03-2017 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 RG43_RS06205 c3494179e791e49669b5cb9f27f12431 853 Pfam PF05188 MutS domain II 131 256 5.3E-33 T 09-03-2017 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 RG43_RS06205 c3494179e791e49669b5cb9f27f12431 853 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 688 704 - T 09-03-2017 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 RG43_RS06205 c3494179e791e49669b5cb9f27f12431 853 SUPERFAMILY SSF48334 270 566 2.35E-90 T 09-03-2017 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 RG43_RS06205 c3494179e791e49669b5cb9f27f12431 853 SUPERFAMILY SSF55271 6 116 4.58E-43 T 09-03-2017 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 RG43_RS06205 c3494179e791e49669b5cb9f27f12431 853 Gene3D G3DSA:3.30.420.110 129 258 5.7E-43 T 09-03-2017 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 RG43_RS06205 c3494179e791e49669b5cb9f27f12431 853 Pfam PF01624 MutS domain I 11 122 4.0E-43 T 09-03-2017 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 RG43_RS06205 c3494179e791e49669b5cb9f27f12431 853 Pfam PF05192 MutS domain III 272 559 3.7E-41 T 09-03-2017 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 RG43_RS06205 c3494179e791e49669b5cb9f27f12431 853 Gene3D G3DSA:3.40.50.300 567 797 1.6E-82 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS06205 c3494179e791e49669b5cb9f27f12431 853 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 10 845 25.46 T 09-03-2017 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 RG43_RS06205 c3494179e791e49669b5cb9f27f12431 853 SMART SM00533 286 591 3.5E-111 T 09-03-2017 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 RG43_RS06205 c3494179e791e49669b5cb9f27f12431 853 SMART SM00534 607 794 2.5E-123 T 09-03-2017 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 RG43_RS06205 c3494179e791e49669b5cb9f27f12431 853 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 10 850 0.0 T 09-03-2017 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 RG43_RS06205 c3494179e791e49669b5cb9f27f12431 853 SUPERFAMILY SSF52540 567 798 7.99E-62 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS06205 c3494179e791e49669b5cb9f27f12431 853 Pfam PF05190 MutS family domain IV 428 517 1.5E-28 T 09-03-2017 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 RG43_RS06205 c3494179e791e49669b5cb9f27f12431 853 Gene3D G3DSA:3.40.1170.10 5 123 2.6E-52 T 09-03-2017 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 RG43_RS06205 c3494179e791e49669b5cb9f27f12431 853 Gene3D G3DSA:1.10.1420.10 319 477 4.8E-56 T 09-03-2017 RG43_RS06205 c3494179e791e49669b5cb9f27f12431 853 Pfam PF00488 MutS domain V 610 797 3.4E-88 T 09-03-2017 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 RG43_RS09755 fcab732068a0c81005aa38924e910a9c 355 Gene3D G3DSA:3.30.230.40 172 253 4.8E-38 T 09-03-2017 RG43_RS09755 fcab732068a0c81005aa38924e910a9c 355 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 319 331 - T 09-03-2017 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 RG43_RS09755 fcab732068a0c81005aa38924e910a9c 355 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 226 239 - T 09-03-2017 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 RG43_RS09755 fcab732068a0c81005aa38924e910a9c 355 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 196 337 1.3E-64 T 09-03-2017 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 RG43_RS09755 fcab732068a0c81005aa38924e910a9c 355 Pfam PF08645 Polynucleotide kinase 3 phosphatase 8 134 5.3E-6 T 09-03-2017 IPR013954 Polynucleotide kinase 3 phosphatase Reactome: R-HSA-5649702 RG43_RS09755 fcab732068a0c81005aa38924e910a9c 355 SUPERFAMILY SSF54211 252 342 1.39E-32 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold RG43_RS09755 fcab732068a0c81005aa38924e910a9c 355 SUPERFAMILY SSF54211 167 251 1.39E-31 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold RG43_RS09755 fcab732068a0c81005aa38924e910a9c 355 Gene3D G3DSA:3.40.50.1000 1 171 7.4E-43 T 09-03-2017 IPR023214 HAD-like domain RG43_RS09755 fcab732068a0c81005aa38924e910a9c 355 Gene3D G3DSA:3.30.230.40 258 355 5.5E-32 T 09-03-2017 RG43_RS09755 fcab732068a0c81005aa38924e910a9c 355 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 5 144 4.3E-46 T 09-03-2017 IPR006543 Histidinol-phosphate phosphatase GO:0016791 RG43_RS09755 fcab732068a0c81005aa38924e910a9c 355 SUPERFAMILY SSF56784 1 158 7.32E-41 T 09-03-2017 IPR023214 HAD-like domain RG43_RS09755 fcab732068a0c81005aa38924e910a9c 355 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 167 355 37.699 T 09-03-2017 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 RG43_RS09755 fcab732068a0c81005aa38924e910a9c 355 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 3 162 8.7E-84 T 09-03-2017 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 RG43_RS09755 fcab732068a0c81005aa38924e910a9c 355 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 146 4.2E-26 T 09-03-2017 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 RG43_RS09755 fcab732068a0c81005aa38924e910a9c 355 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 2 355 55.014 T 09-03-2017 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 RG43_RS22690 420e3245fb25a6d31d46969c64618b10 515 Pfam PF01256 Carbohydrate kinase 258 496 1.1E-81 T 09-03-2017 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 RG43_RS22690 420e3245fb25a6d31d46969c64618b10 515 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 438 448 - T 09-03-2017 IPR017953 Carbohydrate kinase, predicted, conserved site RG43_RS22690 420e3245fb25a6d31d46969c64618b10 515 Pfam PF03853 YjeF-related protein N-terminus 40 199 6.8E-44 T 09-03-2017 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 RG43_RS22690 420e3245fb25a6d31d46969c64618b10 515 SUPERFAMILY SSF53613 233 498 1.93E-75 T 09-03-2017 IPR029056 Ribokinase-like RG43_RS22690 420e3245fb25a6d31d46969c64618b10 515 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 234 503 23.307 T 09-03-2017 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 RG43_RS22690 420e3245fb25a6d31d46969c64618b10 515 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 19 220 23.899 T 09-03-2017 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 RG43_RS22690 420e3245fb25a6d31d46969c64618b10 515 PIRSF PIRSF017184 15 506 2.1E-178 T 09-03-2017 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 RG43_RS22690 420e3245fb25a6d31d46969c64618b10 515 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 231 499 1.2E-98 T 09-03-2017 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 RG43_RS22690 420e3245fb25a6d31d46969c64618b10 515 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 17 220 9.3E-73 T 09-03-2017 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 RG43_RS22690 420e3245fb25a6d31d46969c64618b10 515 Gene3D G3DSA:3.40.50.10260 16 240 3.2E-70 T 09-03-2017 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 RG43_RS22690 420e3245fb25a6d31d46969c64618b10 515 ProSitePatterns PS01049 YjeF C-terminal domain signature 1. 323 333 - T 09-03-2017 IPR017953 Carbohydrate kinase, predicted, conserved site RG43_RS22690 420e3245fb25a6d31d46969c64618b10 515 SUPERFAMILY SSF64153 17 256 1.14E-64 T 09-03-2017 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 RG43_RS22690 420e3245fb25a6d31d46969c64618b10 515 Gene3D G3DSA:3.40.1190.20 241 498 1.4E-91 T 09-03-2017 IPR029056 Ribokinase-like RG43_RS08625 1387a8d74292f5942bdcf7bc0a48ef93 207 Gene3D G3DSA:3.90.1720.10 52 87 1.5E-6 T 09-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain RG43_RS08625 1387a8d74292f5942bdcf7bc0a48ef93 207 Gene3D G3DSA:3.90.1720.10 129 177 1.5E-6 T 09-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain RG43_RS08625 1387a8d74292f5942bdcf7bc0a48ef93 207 Pfam PF06672 Protein of unknown function (DUF1175) 20 205 3.5E-76 T 09-03-2017 IPR009558 Protein of unknown function DUF1175 RG43_RS06620 9eddc944709ec6ef4afe37deef2da94e 113 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 4 112 34.055 T 09-03-2017 IPR026592 Outer membrane protein assembly factor BamE RG43_RS06620 9eddc944709ec6ef4afe37deef2da94e 113 Pfam PF04355 SmpA / OmlA family 35 104 4.3E-27 T 09-03-2017 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 RG43_RS08245 5d5678182ef2a5d2964a53f0bb22c17e 257 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS08245 5d5678182ef2a5d2964a53f0bb22c17e 257 SMART SM00382 30 229 7.6E-16 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS08245 5d5678182ef2a5d2964a53f0bb22c17e 257 PIRSF PIRSF039085 2 257 2.0E-122 T 09-03-2017 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 RG43_RS08245 5d5678182ef2a5d2964a53f0bb22c17e 257 Gene3D G3DSA:3.40.50.300 6 252 1.6E-81 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS08245 5d5678182ef2a5d2964a53f0bb22c17e 257 SUPERFAMILY SSF52540 6 251 3.24E-75 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS08245 5d5678182ef2a5d2964a53f0bb22c17e 257 Pfam PF00005 ABC transporter 21 181 1.3E-33 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS24115 11479371a3ebfb9010278baf71307750 308 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 17 300 9.7E-154 T 09-03-2017 RG43_RS24115 11479371a3ebfb9010278baf71307750 308 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 8 301 21.111 T 09-03-2017 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 RG43_RS24115 11479371a3ebfb9010278baf71307750 308 PIRSF PIRSF005355 1 306 1.7E-100 T 09-03-2017 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 RG43_RS24115 11479371a3ebfb9010278baf71307750 308 Pfam PF01040 UbiA prenyltransferase family 26 273 5.1E-38 T 09-03-2017 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 RG43_RS01720 6214d45ce9b8a0c398874acaee29688e 367 SUPERFAMILY SSF51735 1 147 1.06E-53 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS01720 6214d45ce9b8a0c398874acaee29688e 367 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 261 275 - T 09-03-2017 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 RG43_RS01720 6214d45ce9b8a0c398874acaee29688e 367 SUPERFAMILY SSF55347 134 354 1.37E-78 T 09-03-2017 RG43_RS01720 6214d45ce9b8a0c398874acaee29688e 367 Gene3D G3DSA:3.30.360.10 143 350 8.5E-77 T 09-03-2017 RG43_RS01720 6214d45ce9b8a0c398874acaee29688e 367 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 2 366 3.3E-227 T 09-03-2017 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 RG43_RS01720 6214d45ce9b8a0c398874acaee29688e 367 SMART SM00859 3 122 2.2E-24 T 09-03-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RG43_RS01720 6214d45ce9b8a0c398874acaee29688e 367 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 367 34.33 T 09-03-2017 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 RG43_RS01720 6214d45ce9b8a0c398874acaee29688e 367 PIRSF PIRSF000148 1 367 2.0E-71 T 09-03-2017 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 RG43_RS01720 6214d45ce9b8a0c398874acaee29688e 367 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 144 353 6.8E-61 T 09-03-2017 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 RG43_RS01720 6214d45ce9b8a0c398874acaee29688e 367 Gene3D G3DSA:3.40.50.720 1 142 1.3E-67 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS01720 6214d45ce9b8a0c398874acaee29688e 367 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 120 4.6E-24 T 09-03-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RG43_RS08955 5648dbdd01a92664ee65d6337de4ceed 312 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 249 262 - T 09-03-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RG43_RS08955 5648dbdd01a92664ee65d6337de4ceed 312 Gene3D G3DSA:3.40.1190.20 37 309 5.9E-86 T 09-03-2017 IPR029056 Ribokinase-like RG43_RS08955 5648dbdd01a92664ee65d6337de4ceed 312 SUPERFAMILY SSF53613 7 290 1.87E-69 T 09-03-2017 IPR029056 Ribokinase-like RG43_RS08955 5648dbdd01a92664ee65d6337de4ceed 312 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 5 308 1.9E-101 T 09-03-2017 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 RG43_RS08955 5648dbdd01a92664ee65d6337de4ceed 312 Pfam PF00294 pfkB family carbohydrate kinase 14 293 1.9E-68 T 09-03-2017 IPR011611 Carbohydrate kinase PfkB RG43_RS08955 5648dbdd01a92664ee65d6337de4ceed 312 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 39 63 - T 09-03-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RG43_RS08955 5648dbdd01a92664ee65d6337de4ceed 312 PIRSF PIRSF000535 2 311 7.9E-119 T 09-03-2017 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 RG43_RS08955 5648dbdd01a92664ee65d6337de4ceed 312 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 5 308 5.5E-99 T 09-03-2017 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 RG43_RS07225 d9bc9da04c5f1350fe8cf85e2781ab22 71 Gene3D G3DSA:2.10.290.10 1 70 4.9E-34 T 09-03-2017 IPR029037 YfgJ-like RG43_RS07225 d9bc9da04c5f1350fe8cf85e2781ab22 71 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 1 71 2.0E-32 T 09-03-2017 IPR010807 Protein of unknown function DUF1407 RG43_RS07225 d9bc9da04c5f1350fe8cf85e2781ab22 71 SUPERFAMILY SSF161187 1 69 5.75E-30 T 09-03-2017 IPR029037 YfgJ-like RG43_RS07225 d9bc9da04c5f1350fe8cf85e2781ab22 71 Pfam PF07191 zinc-ribbons 4 68 1.7E-30 T 09-03-2017 IPR010807 Protein of unknown function DUF1407 RG43_RS11955 408065777fd7526cde0f331eee939963 450 SUPERFAMILY SSF56327 173 443 5.14E-79 T 09-03-2017 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 RG43_RS11955 408065777fd7526cde0f331eee939963 450 Gene3D G3DSA:3.40.50.720 3 168 3.9E-72 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS11955 408065777fd7526cde0f331eee939963 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 6 21 6.5E-52 T 09-03-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 RG43_RS11955 408065777fd7526cde0f331eee939963 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 6.5E-52 T 09-03-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 RG43_RS11955 408065777fd7526cde0f331eee939963 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 194 206 6.5E-52 T 09-03-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 RG43_RS11955 408065777fd7526cde0f331eee939963 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 98 111 6.5E-52 T 09-03-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 RG43_RS11955 408065777fd7526cde0f331eee939963 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 77 93 6.5E-52 T 09-03-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 RG43_RS11955 408065777fd7526cde0f331eee939963 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 6.5E-52 T 09-03-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 RG43_RS11955 408065777fd7526cde0f331eee939963 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 6.5E-52 T 09-03-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 RG43_RS11955 408065777fd7526cde0f331eee939963 450 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 199 415 2.5E-35 T 09-03-2017 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 RG43_RS11955 408065777fd7526cde0f331eee939963 450 SUPERFAMILY SSF51735 4 167 3.63E-56 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS11955 408065777fd7526cde0f331eee939963 450 Gene3D G3DSA:3.90.110.10 170 439 9.6E-86 T 09-03-2017 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 RG43_RS11955 408065777fd7526cde0f331eee939963 450 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 141 172 - T 09-03-2017 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 RG43_RS11955 408065777fd7526cde0f331eee939963 450 Pfam PF02056 Family 4 glycosyl hydrolase 6 187 1.9E-77 T 09-03-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 RG43_RS16570 1f42062652e327a66a7fccdab455504e 171 Pfam PF13505 Outer membrane protein beta-barrel domain 9 171 3.7E-23 T 09-03-2017 IPR027385 Outer membrane protein beta-barrel RG43_RS16570 1f42062652e327a66a7fccdab455504e 171 SUPERFAMILY SSF56925 27 171 2.62E-34 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RG43_RS16570 1f42062652e327a66a7fccdab455504e 171 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 163 171 - T 09-03-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 RG43_RS16570 1f42062652e327a66a7fccdab455504e 171 Gene3D G3DSA:2.40.160.20 26 171 2.4E-46 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RG43_RS16570 1f42062652e327a66a7fccdab455504e 171 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 132 153 1.7E-39 T 09-03-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 RG43_RS16570 1f42062652e327a66a7fccdab455504e 171 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 159 170 1.7E-39 T 09-03-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 RG43_RS16570 1f42062652e327a66a7fccdab455504e 171 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 85 108 1.7E-39 T 09-03-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 RG43_RS16570 1f42062652e327a66a7fccdab455504e 171 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 45 57 1.7E-39 T 09-03-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 RG43_RS16570 1f42062652e327a66a7fccdab455504e 171 ProSitePatterns PS00694 Enterobacterial virulence outer membrane protein signature 1. 46 54 - T 09-03-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 RG43_RS19290 232205e83173b917c03c640451574d8c 393 TIGRFAM TIGR00896 CynX: cyanate transporter 10 362 1.9E-143 T 09-03-2017 IPR004747 Cyanate transport system protein GO:0016021 RG43_RS19290 232205e83173b917c03c640451574d8c 393 Gene3D G3DSA:1.20.1250.20 205 377 5.2E-13 T 09-03-2017 RG43_RS19290 232205e83173b917c03c640451574d8c 393 Gene3D G3DSA:1.20.1250.20 28 188 4.7E-14 T 09-03-2017 RG43_RS19290 232205e83173b917c03c640451574d8c 393 SUPERFAMILY SSF103473 7 383 3.4E-46 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS19290 232205e83173b917c03c640451574d8c 393 Pfam PF07690 Major Facilitator Superfamily 27 346 1.1E-23 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS01235 48f64460bb97d9e73b747447b9881319 465 SUPERFAMILY SSF46626 319 460 4.73E-40 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RG43_RS01235 48f64460bb97d9e73b747447b9881319 465 Pfam PF03150 Di-haem cytochrome c peroxidase 185 332 7.3E-48 T 09-03-2017 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 RG43_RS01235 48f64460bb97d9e73b747447b9881319 465 Pfam PF00034 Cytochrome c 340 453 3.4E-7 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RG43_RS01235 48f64460bb97d9e73b747447b9881319 465 SUPERFAMILY SSF46626 170 320 1.35E-46 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RG43_RS01235 48f64460bb97d9e73b747447b9881319 465 SMART SM01235 16 155 9.3E-54 T 09-03-2017 IPR025992 Haem-binding domain RG43_RS01235 48f64460bb97d9e73b747447b9881319 465 Pfam PF14376 Haem-binding domain 18 152 6.3E-34 T 09-03-2017 IPR025992 Haem-binding domain RG43_RS01235 48f64460bb97d9e73b747447b9881319 465 Gene3D G3DSA:1.10.760.10 174 336 3.9E-51 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RG43_RS01235 48f64460bb97d9e73b747447b9881319 465 Gene3D G3DSA:1.10.760.10 337 460 3.4E-20 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RG43_RS20780 05da24c5c4c8ad6f089a6b0f64ca9d12 234 Pfam PF03749 Sugar fermentation stimulation protein 13 225 2.1E-77 T 09-03-2017 IPR005224 Sugar fermentation stimulation protein RG43_RS20780 05da24c5c4c8ad6f089a6b0f64ca9d12 234 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 1 234 4.0E-106 T 09-03-2017 IPR005224 Sugar fermentation stimulation protein RG43_RS20780 05da24c5c4c8ad6f089a6b0f64ca9d12 234 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 234 58.955 T 09-03-2017 IPR005224 Sugar fermentation stimulation protein RG43_RS23770 951984a24105ceca351709a149fd5e19 121 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 56 100 4.0E-17 T 09-03-2017 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS23770 951984a24105ceca351709a149fd5e19 121 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 55 121 6.0E-31 T 09-03-2017 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS23770 951984a24105ceca351709a149fd5e19 121 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 121 25.446 T 09-03-2017 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS23770 951984a24105ceca351709a149fd5e19 121 SUPERFAMILY SSF48300 3 57 5.62E-16 T 09-03-2017 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS23770 951984a24105ceca351709a149fd5e19 121 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 121 8.4E-48 T 09-03-2017 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS23770 951984a24105ceca351709a149fd5e19 121 SUPERFAMILY SSF54736 50 121 3.49E-25 T 09-03-2017 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RG43_RS23770 951984a24105ceca351709a149fd5e19 121 Gene3D G3DSA:1.20.5.710 2 50 1.5E-22 T 09-03-2017 RG43_RS23770 951984a24105ceca351709a149fd5e19 121 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 49 4.6E-15 T 09-03-2017 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS23770 951984a24105ceca351709a149fd5e19 121 Gene3D G3DSA:3.30.1390.10 51 121 5.7E-34 T 09-03-2017 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RG43_RS25825 576bc0a70da9c15bbe0858ea0b461921 439 ProSitePatterns PS00942 glpT family of transporters signature. 151 167 - T 09-03-2017 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-3229133|Reactome: R-HSA-70153 RG43_RS25825 576bc0a70da9c15bbe0858ea0b461921 439 Pfam PF07690 Major Facilitator Superfamily 35 396 7.0E-49 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS25825 576bc0a70da9c15bbe0858ea0b461921 439 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 413 2.6E-153 T 09-03-2017 RG43_RS25825 576bc0a70da9c15bbe0858ea0b461921 439 Gene3D G3DSA:1.20.1250.20 243 434 2.1E-37 T 09-03-2017 RG43_RS25825 576bc0a70da9c15bbe0858ea0b461921 439 Gene3D G3DSA:1.20.1250.20 21 210 2.6E-48 T 09-03-2017 RG43_RS25825 576bc0a70da9c15bbe0858ea0b461921 439 PIRSF PIRSF002808 6 439 2.3E-157 T 09-03-2017 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 RG43_RS25825 576bc0a70da9c15bbe0858ea0b461921 439 SUPERFAMILY SSF103473 16 432 3.66E-77 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS15085 401689333e60d09779c2ba651ccf31a1 413 SMART SM00825 Beta-ketoacyl synthase 6 413 9.7E-14 T 09-03-2017 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RG43_RS15085 401689333e60d09779c2ba651ccf31a1 413 SUPERFAMILY SSF53901 3 252 7.02E-78 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 RG43_RS15085 401689333e60d09779c2ba651ccf31a1 413 SUPERFAMILY SSF53901 215 412 1.54E-73 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 RG43_RS15085 401689333e60d09779c2ba651ccf31a1 413 Gene3D G3DSA:3.40.47.10 2 260 1.1E-76 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 RG43_RS15085 401689333e60d09779c2ba651ccf31a1 413 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 411 1.6E-196 T 09-03-2017 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 RG43_RS15085 401689333e60d09779c2ba651ccf31a1 413 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 6.5E-63 T 09-03-2017 IPR014030 Beta-ketoacyl synthase, N-terminal RG43_RS15085 401689333e60d09779c2ba651ccf31a1 413 Gene3D G3DSA:3.40.47.10 263 412 1.1E-63 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 RG43_RS15085 401689333e60d09779c2ba651ccf31a1 413 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 09-03-2017 IPR018201 Beta-ketoacyl synthase, active site RG43_RS15085 401689333e60d09779c2ba651ccf31a1 413 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 1.6E-39 T 09-03-2017 IPR014031 Beta-ketoacyl synthase, C-terminal RG43_RS15085 401689333e60d09779c2ba651ccf31a1 413 PIRSF PIRSF000447 1 413 5.2E-206 T 09-03-2017 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 RG43_RS23335 ac4d484f109c62b1a515953b4e3042a8 93 Pfam PF15940 Family of unknown function 1 90 5.8E-44 T 09-03-2017 IPR016958 Uncharacterised conserved protein UCP030798 RG43_RS23335 ac4d484f109c62b1a515953b4e3042a8 93 PIRSF PIRSF030798 1 93 4.8E-66 T 09-03-2017 IPR016958 Uncharacterised conserved protein UCP030798 RG43_RS23335 ac4d484f109c62b1a515953b4e3042a8 93 ProDom PD064934 YJCB MEMBRANE INNER ECS5042 21 93 3.0E-37 T 09-03-2017 IPR016958 Uncharacterised conserved protein UCP030798 RG43_RS03250 cc95a3f97767c2abc9f7e05cd6108516 255 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 28 239 8.8E-19 T 09-03-2017 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 RG43_RS03250 cc95a3f97767c2abc9f7e05cd6108516 255 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 138 156 - T 09-03-2017 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 RG43_RS03250 cc95a3f97767c2abc9f7e05cd6108516 255 Gene3D G3DSA:3.40.50.1360 22 251 3.0E-63 T 09-03-2017 RG43_RS03250 cc95a3f97767c2abc9f7e05cd6108516 255 SUPERFAMILY SSF100950 23 253 5.86E-59 T 09-03-2017 RG43_RS15175 3ea45bf91377644637e3d465a8ecb854 232 PRINTS PR01008 Flagellar L-ring protein signature 73 85 1.8E-36 T 09-03-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 RG43_RS15175 3ea45bf91377644637e3d465a8ecb854 232 PRINTS PR01008 Flagellar L-ring protein signature 172 188 1.8E-36 T 09-03-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 RG43_RS15175 3ea45bf91377644637e3d465a8ecb854 232 PRINTS PR01008 Flagellar L-ring protein signature 146 161 1.8E-36 T 09-03-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 RG43_RS15175 3ea45bf91377644637e3d465a8ecb854 232 PRINTS PR01008 Flagellar L-ring protein signature 193 207 1.8E-36 T 09-03-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 RG43_RS15175 3ea45bf91377644637e3d465a8ecb854 232 PRINTS PR01008 Flagellar L-ring protein signature 209 223 1.8E-36 T 09-03-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 RG43_RS15175 3ea45bf91377644637e3d465a8ecb854 232 Pfam PF02107 Flagellar L-ring protein 47 231 1.7E-60 T 09-03-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 RG43_RS15175 3ea45bf91377644637e3d465a8ecb854 232 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 230 28.065 T 09-03-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 RG43_RS15130 12f8f31f39d11c38301d29973428e6a5 319 Gene3D G3DSA:3.10.290.10 20 68 1.4E-7 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 RG43_RS15130 12f8f31f39d11c38301d29973428e6a5 319 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 140 154 - T 09-03-2017 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 RG43_RS15130 12f8f31f39d11c38301d29973428e6a5 319 Pfam PF01479 S4 domain 20 66 1.7E-10 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 RG43_RS15130 12f8f31f39d11c38301d29973428e6a5 319 SMART SM00363 20 79 1.7E-9 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 RG43_RS15130 12f8f31f39d11c38301d29973428e6a5 319 Pfam PF00849 RNA pseudouridylate synthase 101 249 1.3E-29 T 09-03-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RG43_RS15130 12f8f31f39d11c38301d29973428e6a5 319 SUPERFAMILY SSF55120 95 316 1.76E-67 T 09-03-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RG43_RS15130 12f8f31f39d11c38301d29973428e6a5 319 SUPERFAMILY SSF55174 19 70 4.42E-9 T 09-03-2017 RG43_RS15130 12f8f31f39d11c38301d29973428e6a5 319 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 316 1.4E-101 T 09-03-2017 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 RG43_RS23795 b5d2ac662405ed8122bc520d5bb79ca1 181 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 09-03-2017 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site RG43_RS23795 b5d2ac662405ed8122bc520d5bb79ca1 181 SUPERFAMILY SSF82679 6 116 2.49E-40 T 09-03-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 RG43_RS23795 b5d2ac662405ed8122bc520d5bb79ca1 181 Gene3D G3DSA:2.30.30.30 120 181 1.7E-32 T 09-03-2017 IPR014722 Ribosomal protein L2 domain 2 RG43_RS23795 b5d2ac662405ed8122bc520d5bb79ca1 181 SMART SM00739 127 154 7.9E-7 T 09-03-2017 IPR005824 KOW RG43_RS23795 b5d2ac662405ed8122bc520d5bb79ca1 181 Pfam PF02357 Transcription termination factor nusG 7 112 1.8E-27 T 09-03-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 RG43_RS23795 b5d2ac662405ed8122bc520d5bb79ca1 181 Pfam PF00467 KOW motif 130 162 4.2E-8 T 09-03-2017 IPR005824 KOW RG43_RS23795 b5d2ac662405ed8122bc520d5bb79ca1 181 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 180 5.7E-72 T 09-03-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 RG43_RS23795 b5d2ac662405ed8122bc520d5bb79ca1 181 Gene3D G3DSA:3.30.70.940 6 116 4.3E-43 T 09-03-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 RG43_RS23795 b5d2ac662405ed8122bc520d5bb79ca1 181 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 25.014 T 09-03-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 RG43_RS23795 b5d2ac662405ed8122bc520d5bb79ca1 181 SUPERFAMILY SSF50104 125 180 4.66E-20 T 09-03-2017 IPR008991 Translation protein SH3-like domain RG43_RS23795 b5d2ac662405ed8122bc520d5bb79ca1 181 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 1.9E-21 T 09-03-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 RG43_RS23795 b5d2ac662405ed8122bc520d5bb79ca1 181 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 1.9E-21 T 09-03-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 RG43_RS23795 b5d2ac662405ed8122bc520d5bb79ca1 181 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 1.9E-21 T 09-03-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 RG43_RS23795 b5d2ac662405ed8122bc520d5bb79ca1 181 SMART SM00738 6 115 5.9E-51 T 09-03-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 RG43_RS01415 1c67a98a22f1d40a2b6dd4f00dd93343 250 Gene3D G3DSA:3.40.50.150 57 247 3.9E-73 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS01415 1c67a98a22f1d40a2b6dd4f00dd93343 250 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 248 37.945 T 09-03-2017 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 RG43_RS01415 1c67a98a22f1d40a2b6dd4f00dd93343 250 Gene3D G3DSA:3.40.1630.10 1 56 3.8E-30 T 09-03-2017 RG43_RS01415 1c67a98a22f1d40a2b6dd4f00dd93343 250 Pfam PF04445 Putative SAM-dependent methyltransferase 19 246 3.2E-105 T 09-03-2017 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 RG43_RS01415 1c67a98a22f1d40a2b6dd4f00dd93343 250 SUPERFAMILY SSF53335 10 246 3.85E-74 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS26315 9326de134011596acef338cbd6f9cc3b 99 Pfam PF04380 Membrane fusogenic activity 1 78 9.5E-29 T 09-03-2017 IPR007475 Membrane fusogenic activity RG43_RS03940 9326de134011596acef338cbd6f9cc3b 99 Pfam PF04380 Membrane fusogenic activity 1 78 9.5E-29 T 09-03-2017 IPR007475 Membrane fusogenic activity RG43_RS01700 3bc30c6e0efeb551e706ffa51cd07ed6 331 SUPERFAMILY SSF47413 5 62 5.63E-13 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS01700 3bc30c6e0efeb551e706ffa51cd07ed6 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 52 7.8E-18 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS01700 3bc30c6e0efeb551e706ffa51cd07ed6 331 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 09-03-2017 RG43_RS01700 3bc30c6e0efeb551e706ffa51cd07ed6 331 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 64 309 8.4E-31 T 09-03-2017 IPR001761 Periplasmic binding protein/LacI sugar binding domain RG43_RS01700 3bc30c6e0efeb551e706ffa51cd07ed6 331 Gene3D G3DSA:1.10.260.40 4 59 1.1E-16 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS01700 3bc30c6e0efeb551e706ffa51cd07ed6 331 Gene3D G3DSA:3.40.50.2300 62 173 6.9E-42 T 09-03-2017 RG43_RS01700 3bc30c6e0efeb551e706ffa51cd07ed6 331 SUPERFAMILY SSF53822 63 316 3.53E-61 T 09-03-2017 IPR028082 Periplasmic binding protein-like I RG43_RS01700 3bc30c6e0efeb551e706ffa51cd07ed6 331 SMART SM00354 5 75 2.0E-26 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS01700 3bc30c6e0efeb551e706ffa51cd07ed6 331 Gene3D G3DSA:3.40.50.2300 174 330 1.5E-45 T 09-03-2017 RG43_RS04870 82e723525897b48f9c75d72d36332b39 420 Pfam PF00589 Phage integrase family 211 382 6.6E-16 T 09-03-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RG43_RS04870 82e723525897b48f9c75d72d36332b39 420 Gene3D G3DSA:1.10.150.130 97 193 1.0E-11 T 09-03-2017 IPR023109 Integrase/recombinase, N-terminal RG43_RS04870 82e723525897b48f9c75d72d36332b39 420 Pfam PF13356 Domain of unknown function (DUF4102) 3 87 1.2E-21 T 09-03-2017 IPR025166 Domain of unknown function DUF4102 RG43_RS04870 82e723525897b48f9c75d72d36332b39 420 SUPERFAMILY SSF56349 97 388 1.12E-48 T 09-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RG43_RS04870 82e723525897b48f9c75d72d36332b39 420 Gene3D G3DSA:1.10.443.10 206 384 2.6E-19 T 09-03-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RG43_RS14000 675d62682d6a746a0fabf1a1892a3591 661 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 235 394 2.1E-35 T 09-03-2017 IPR000160 GGDEF domain RG43_RS14000 675d62682d6a746a0fabf1a1892a3591 661 SMART SM00052 405 649 6.7E-119 T 09-03-2017 IPR001633 EAL domain RG43_RS14000 675d62682d6a746a0fabf1a1892a3591 661 Pfam PF00563 EAL domain 412 644 6.4E-65 T 09-03-2017 IPR001633 EAL domain RG43_RS14000 675d62682d6a746a0fabf1a1892a3591 661 Gene3D G3DSA:3.30.70.270 239 403 1.6E-51 T 09-03-2017 RG43_RS14000 675d62682d6a746a0fabf1a1892a3591 661 SUPERFAMILY SSF55073 243 397 3.06E-44 T 09-03-2017 IPR029787 Nucleotide cyclase RG43_RS14000 675d62682d6a746a0fabf1a1892a3591 661 Pfam PF00990 Diguanylate cyclase, GGDEF domain 237 390 2.1E-46 T 09-03-2017 IPR000160 GGDEF domain RG43_RS14000 675d62682d6a746a0fabf1a1892a3591 661 Gene3D G3DSA:3.20.20.450 409 656 4.9E-87 T 09-03-2017 IPR001633 EAL domain RG43_RS14000 675d62682d6a746a0fabf1a1892a3591 661 SMART SM00267 226 395 1.2E-69 T 09-03-2017 IPR000160 GGDEF domain RG43_RS14000 675d62682d6a746a0fabf1a1892a3591 661 SUPERFAMILY SSF55785 123 234 1.47E-15 T 09-03-2017 IPR000014 PAS domain RG43_RS14000 675d62682d6a746a0fabf1a1892a3591 661 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 115 233 2.5E-13 T 09-03-2017 IPR000014 PAS domain RG43_RS14000 675d62682d6a746a0fabf1a1892a3591 661 Pfam PF13426 PAS domain 123 225 1.1E-9 T 09-03-2017 IPR000014 PAS domain RG43_RS14000 675d62682d6a746a0fabf1a1892a3591 661 Gene3D G3DSA:3.30.450.20 111 218 2.9E-18 T 09-03-2017 RG43_RS14000 675d62682d6a746a0fabf1a1892a3591 661 SUPERFAMILY SSF141868 412 657 1.83E-81 T 09-03-2017 IPR001633 EAL domain RG43_RS14000 675d62682d6a746a0fabf1a1892a3591 661 SMART SM00091 111 177 1.0E-6 T 09-03-2017 IPR000014 PAS domain RG43_RS12740 1012a7f951bc4856368ad18a8de3478a 205 Pfam PF13247 4Fe-4S dicluster domain 59 153 2.0E-29 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS12740 1012a7f951bc4856368ad18a8de3478a 205 SUPERFAMILY SSF54862 3 198 6.59E-71 T 09-03-2017 RG43_RS12740 1012a7f951bc4856368ad18a8de3478a 205 Pfam PF12800 4Fe-4S binding domain 12 25 0.0022 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS12740 1012a7f951bc4856368ad18a8de3478a 205 Gene3D G3DSA:3.30.70.20 75 118 1.8E-26 T 09-03-2017 RG43_RS12740 1012a7f951bc4856368ad18a8de3478a 205 Gene3D G3DSA:3.30.70.20 119 171 2.6E-18 T 09-03-2017 RG43_RS12740 1012a7f951bc4856368ad18a8de3478a 205 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 4 163 7.4E-80 T 09-03-2017 IPR014297 Dimethylsulphoxide reductase, chain B RG43_RS12740 1012a7f951bc4856368ad18a8de3478a 205 Gene3D G3DSA:3.30.70.20 4 74 6.5E-18 T 09-03-2017 RG43_RS12740 1012a7f951bc4856368ad18a8de3478a 205 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS17485 97c4f8e5f3945148b22e608ab16ea872 493 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 65 89 - T 09-03-2017 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 RG43_RS17485 97c4f8e5f3945148b22e608ab16ea872 493 Hamap MF_01880 Dipeptide permease D [dtpD]. 1 493 63.442 T 09-03-2017 IPR023777 Amino acid/peptide transporter family, dipeptide permease D GO:0005887|GO:0042938 RG43_RS17485 97c4f8e5f3945148b22e608ab16ea872 493 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 140 152 - T 09-03-2017 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 RG43_RS17485 97c4f8e5f3945148b22e608ab16ea872 493 Pfam PF00854 POT family 77 443 7.4E-97 T 09-03-2017 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 RG43_RS17485 97c4f8e5f3945148b22e608ab16ea872 493 SUPERFAMILY SSF103473 260 480 2.22E-27 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS17485 97c4f8e5f3945148b22e608ab16ea872 493 SUPERFAMILY SSF103473 7 206 2.22E-27 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS17485 97c4f8e5f3945148b22e608ab16ea872 493 Gene3D G3DSA:1.20.1250.20 20 186 3.9E-18 T 09-03-2017 RG43_RS17485 97c4f8e5f3945148b22e608ab16ea872 493 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 6 465 2.5E-79 T 09-03-2017 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 RG43_RS17565 7550232bfa78624a38570cfc93a02a11 595 Pfam PF03527 RHS protein 384 420 1.4E-16 T 09-03-2017 IPR001826 RHS protein RG43_RS17565 7550232bfa78624a38570cfc93a02a11 595 PRINTS PR00394 RHS protein signature 433 453 6.2E-14 T 09-03-2017 IPR001826 RHS protein RG43_RS17565 7550232bfa78624a38570cfc93a02a11 595 PRINTS PR00394 RHS protein signature 409 424 6.2E-14 T 09-03-2017 IPR001826 RHS protein RG43_RS17565 7550232bfa78624a38570cfc93a02a11 595 PRINTS PR00394 RHS protein signature 456 475 6.2E-14 T 09-03-2017 IPR001826 RHS protein RG43_RS17565 7550232bfa78624a38570cfc93a02a11 595 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 35 67 4.2E-4 T 09-03-2017 IPR006530 YD repeat RG43_RS17565 7550232bfa78624a38570cfc93a02a11 595 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 83 121 2.2E-5 T 09-03-2017 IPR006530 YD repeat RG43_RS17565 7550232bfa78624a38570cfc93a02a11 595 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 295 324 3.6E-7 T 09-03-2017 IPR006530 YD repeat RG43_RS17565 7550232bfa78624a38570cfc93a02a11 595 Pfam PF15633 HYD1 signature containing ADP-ribosyltransferase 499 586 1.3E-12 T 09-03-2017 IPR028920 Tox-ART-HYD1 domain RG43_RS17565 7550232bfa78624a38570cfc93a02a11 595 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 411 488 2.9E-29 T 09-03-2017 IPR022385 Rhs repeat-associated core GO:0097264 RG43_RS17565 7550232bfa78624a38570cfc93a02a11 595 Pfam PF05593 RHS Repeat 275 310 4.3E-7 T 09-03-2017 IPR031325 RHS repeat RG43_RS17565 7550232bfa78624a38570cfc93a02a11 595 Pfam PF05593 RHS Repeat 83 119 4.1E-6 T 09-03-2017 IPR031325 RHS repeat RG43_RS14210 387db450691049ede75a91d06a958e0c 506 Pfam PF07508 Recombinase 187 282 8.5E-14 T 09-03-2017 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 RG43_RS14210 387db450691049ede75a91d06a958e0c 506 SUPERFAMILY SSF53041 4 161 5.75E-15 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RG43_RS14210 387db450691049ede75a91d06a958e0c 506 SMART SM00857 4 166 2.3E-25 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RG43_RS14210 387db450691049ede75a91d06a958e0c 506 Pfam PF00239 Resolvase, N terminal domain 4 162 1.8E-18 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RG43_RS14210 387db450691049ede75a91d06a958e0c 506 Gene3D G3DSA:3.40.50.1390 4 134 7.9E-15 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RG43_RS06575 7ca82405fefa4a973c060e0c5c1f00ed 426 Gene3D G3DSA:3.40.640.10 60 318 3.0E-82 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS06575 7ca82405fefa4a973c060e0c5c1f00ed 426 Gene3D G3DSA:3.90.1150.10 2 59 1.2E-42 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RG43_RS06575 7ca82405fefa4a973c060e0c5c1f00ed 426 Gene3D G3DSA:3.90.1150.10 319 423 1.2E-42 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RG43_RS06575 7ca82405fefa4a973c060e0c5c1f00ed 426 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 9 421 4.6E-163 T 09-03-2017 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 RG43_RS06575 7ca82405fefa4a973c060e0c5c1f00ed 426 SUPERFAMILY SSF53383 20 423 9.41E-135 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS06575 7ca82405fefa4a973c060e0c5c1f00ed 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 236 273 - T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RG43_RS06575 7ca82405fefa4a973c060e0c5c1f00ed 426 Pfam PF00202 Aminotransferase class-III 17 420 5.6E-143 T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RG43_RS18220 b10b042d2ea4f1fba9ed5e66554ba1f3 217 Pfam PF00881 Nitroreductase family 8 193 3.5E-35 T 09-03-2017 IPR029479 Nitroreductase Reactome: R-HSA-209968 RG43_RS18220 b10b042d2ea4f1fba9ed5e66554ba1f3 217 Gene3D G3DSA:3.40.109.10 1 214 1.1E-60 T 09-03-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 RG43_RS18220 b10b042d2ea4f1fba9ed5e66554ba1f3 217 SUPERFAMILY SSF55469 1 216 2.75E-64 T 09-03-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 RG43_RS22765 7fd9360c2b37e65328cd3f220502fd9b 131 PIRSF PIRSF000180 2 130 4.8E-63 T 09-03-2017 IPR003510 Fumarate reductase, subunit C GO:0016020 RG43_RS22765 7fd9360c2b37e65328cd3f220502fd9b 131 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 8 129 4.0E-56 T 09-03-2017 IPR003510 Fumarate reductase, subunit C GO:0016020 RG43_RS22765 7fd9360c2b37e65328cd3f220502fd9b 131 Pfam PF02300 Fumarate reductase subunit C 3 128 1.0E-56 T 09-03-2017 IPR003510 Fumarate reductase, subunit C GO:0016020 RG43_RS22765 7fd9360c2b37e65328cd3f220502fd9b 131 SUPERFAMILY SSF81343 2 131 5.36E-59 T 09-03-2017 RG43_RS22765 7fd9360c2b37e65328cd3f220502fd9b 131 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 2 128 30.453 T 09-03-2017 IPR003510 Fumarate reductase, subunit C GO:0016020 RG43_RS22765 7fd9360c2b37e65328cd3f220502fd9b 131 Gene3D G3DSA:1.20.1300.10 3 130 1.5E-59 T 09-03-2017 RG43_RS23085 d9fcaa5b281933fa6ee8a46cee3a0cb1 194 PIRSF PIRSF020680 1 194 1.1E-65 T 09-03-2017 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 RG43_RS23085 d9fcaa5b281933fa6ee8a46cee3a0cb1 194 SUPERFAMILY SSF159709 13 193 1.05E-57 T 09-03-2017 RG43_RS23085 d9fcaa5b281933fa6ee8a46cee3a0cb1 194 TIGRFAM TIGR03292 PhnH_redo: phosphonate C-P lyase system protein PhnH 7 190 3.2E-60 T 09-03-2017 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 RG43_RS23085 d9fcaa5b281933fa6ee8a46cee3a0cb1 194 Pfam PF05845 Bacterial phosphonate metabolism protein (PhnH) 6 192 1.0E-61 T 09-03-2017 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 RG43_RS02660 883544291c64e5d7f389b2377307a396 294 Gene3D G3DSA:3.40.50.150 14 284 1.3E-71 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS02660 883544291c64e5d7f389b2377307a396 294 Pfam PF01555 DNA methylase 34 250 2.5E-53 T 09-03-2017 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 RG43_RS02660 883544291c64e5d7f389b2377307a396 294 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 237 257 2.8E-39 T 09-03-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 RG43_RS02660 883544291c64e5d7f389b2377307a396 294 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 33 47 2.8E-39 T 09-03-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 RG43_RS02660 883544291c64e5d7f389b2377307a396 294 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 68 88 2.8E-39 T 09-03-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 RG43_RS02660 883544291c64e5d7f389b2377307a396 294 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 195 212 2.8E-39 T 09-03-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 RG43_RS02660 883544291c64e5d7f389b2377307a396 294 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 214 232 2.8E-39 T 09-03-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 RG43_RS02660 883544291c64e5d7f389b2377307a396 294 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 37 43 - T 09-03-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RG43_RS02660 883544291c64e5d7f389b2377307a396 294 SUPERFAMILY SSF53335 16 257 4.42E-62 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS14875 22e04226a9dc62b86f8c48c9d68a8e9c 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 423 1.2E-6 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS14875 22e04226a9dc62b86f8c48c9d68a8e9c 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 458 1.2E-6 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS14875 22e04226a9dc62b86f8c48c9d68a8e9c 486 SMART SM00387 374 480 6.2E-23 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS14875 22e04226a9dc62b86f8c48c9d68a8e9c 486 SUPERFAMILY SSF47384 250 319 5.3E-5 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS14875 22e04226a9dc62b86f8c48c9d68a8e9c 486 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 375 465 1.9E-11 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS14875 22e04226a9dc62b86f8c48c9d68a8e9c 486 SUPERFAMILY SSF55874 336 476 7.07E-30 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS14875 22e04226a9dc62b86f8c48c9d68a8e9c 486 Pfam PF08918 PhoQ Sensor 10 188 2.9E-85 T 09-03-2017 IPR015014 PhoQ Sensor GO:0000160|GO:0004673|GO:0005524|GO:0016020|GO:0018106|GO:0046872 RG43_RS14875 22e04226a9dc62b86f8c48c9d68a8e9c 486 Pfam PF00672 HAMP domain 196 260 2.8E-7 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RG43_RS14875 22e04226a9dc62b86f8c48c9d68a8e9c 486 Gene3D G3DSA:3.30.565.10 340 483 7.7E-31 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS05425 7ae6bf72752c135528f956feb20934e7 398 TIGRFAM TIGR01747 diampropi_NH3ly: diaminopropionate ammonia-lyase family 23 391 2.5E-210 T 09-03-2017 IPR010081 Diaminopropionate ammonia-lyase GO:0008838|GO:0030170 RG43_RS05425 7ae6bf72752c135528f956feb20934e7 398 Gene3D G3DSA:3.40.50.1100 114 390 5.8E-37 T 09-03-2017 RG43_RS05425 7ae6bf72752c135528f956feb20934e7 398 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 41 375 1.6E-49 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RG43_RS05425 7ae6bf72752c135528f956feb20934e7 398 SUPERFAMILY SSF53686 34 354 2.36E-61 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RG43_RS05425 7ae6bf72752c135528f956feb20934e7 398 TIGRFAM TIGR03528 2_3_DAP_am_ly: diaminopropionate ammonia-lyase 6 392 2.2E-196 T 09-03-2017 IPR019871 Diaminopropionate ammonia-lyase, subgroup GO:0008838 RG43_RS26835 e328dffe45bee43887d15477744b91e6 325 SUPERFAMILY SSF158544 214 282 1.62E-18 T 09-03-2017 RG43_RS26835 e328dffe45bee43887d15477744b91e6 325 SUPERFAMILY SSF54523 39 102 2.98E-18 T 09-03-2017 RG43_RS26835 e328dffe45bee43887d15477744b91e6 325 SUPERFAMILY SSF158544 103 211 1.33E-31 T 09-03-2017 RG43_RS26835 e328dffe45bee43887d15477744b91e6 325 Gene3D G3DSA:1.10.40.60 107 211 3.1E-40 T 09-03-2017 RG43_RS26835 e328dffe45bee43887d15477744b91e6 325 PIRSF PIRSF002786 4 325 2.8E-67 T 09-03-2017 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 RG43_RS26835 e328dffe45bee43887d15477744b91e6 325 Pfam PF03934 Type II secretion system (T2SS), protein K 32 312 6.8E-85 T 09-03-2017 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 RG43_RS26835 e328dffe45bee43887d15477744b91e6 325 Gene3D G3DSA:3.30.1300.30 28 106 2.8E-27 T 09-03-2017 RG43_RS26835 e328dffe45bee43887d15477744b91e6 325 Gene3D G3DSA:3.30.1300.30 212 325 2.4E-31 T 09-03-2017 RG43_RS04460 e328dffe45bee43887d15477744b91e6 325 SUPERFAMILY SSF158544 214 282 1.62E-18 T 09-03-2017 RG43_RS04460 e328dffe45bee43887d15477744b91e6 325 SUPERFAMILY SSF54523 39 102 2.98E-18 T 09-03-2017 RG43_RS04460 e328dffe45bee43887d15477744b91e6 325 SUPERFAMILY SSF158544 103 211 1.33E-31 T 09-03-2017 RG43_RS04460 e328dffe45bee43887d15477744b91e6 325 Gene3D G3DSA:1.10.40.60 107 211 3.1E-40 T 09-03-2017 RG43_RS04460 e328dffe45bee43887d15477744b91e6 325 PIRSF PIRSF002786 4 325 2.8E-67 T 09-03-2017 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 RG43_RS04460 e328dffe45bee43887d15477744b91e6 325 Pfam PF03934 Type II secretion system (T2SS), protein K 32 312 6.8E-85 T 09-03-2017 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 RG43_RS04460 e328dffe45bee43887d15477744b91e6 325 Gene3D G3DSA:3.30.1300.30 28 106 2.8E-27 T 09-03-2017 RG43_RS04460 e328dffe45bee43887d15477744b91e6 325 Gene3D G3DSA:3.30.1300.30 212 325 2.4E-31 T 09-03-2017 RG43_RS15640 662e2c654a4d1fc5062f4e29d8747029 70 SMART SM00357 6 70 2.4E-30 T 09-03-2017 IPR011129 Cold shock protein GO:0003676 RG43_RS15640 662e2c654a4d1fc5062f4e29d8747029 70 SUPERFAMILY SSF50249 3 69 6.64E-26 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS15640 662e2c654a4d1fc5062f4e29d8747029 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 2.8E-33 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RG43_RS15640 662e2c654a4d1fc5062f4e29d8747029 70 Gene3D G3DSA:2.40.50.140 5 68 7.9E-32 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS15640 662e2c654a4d1fc5062f4e29d8747029 70 PIRSF PIRSF002599 1 70 3.5E-25 T 09-03-2017 IPR012156 Cold shock, CspA GO:0003676 RG43_RS15640 662e2c654a4d1fc5062f4e29d8747029 70 PRINTS PR00050 Cold shock protein signature 7 22 9.0E-18 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RG43_RS15640 662e2c654a4d1fc5062f4e29d8747029 70 PRINTS PR00050 Cold shock protein signature 43 61 9.0E-18 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RG43_RS15640 662e2c654a4d1fc5062f4e29d8747029 70 PRINTS PR00050 Cold shock protein signature 28 37 9.0E-18 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RG43_RS15640 662e2c654a4d1fc5062f4e29d8747029 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 09-03-2017 IPR019844 Cold-shock conserved site RG43_RS17630 d9cffdb866a8bb27593264b3ff8631c7 732 PIRSF PIRSF009393 1 719 1.3E-291 T 09-03-2017 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 RG43_RS17630 d9cffdb866a8bb27593264b3ff8631c7 732 SUPERFAMILY SSF52172 1 107 1.54E-32 T 09-03-2017 IPR011006 CheY-like superfamily RG43_RS17630 d9cffdb866a8bb27593264b3ff8631c7 732 TIGRFAM TIGR04301 ODC_inducible: ornithine decarboxylase SpeF 1 718 0.0 T 09-03-2017 IPR027568 Ornithine decarboxylase SpeF GO:0004586 KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 RG43_RS17630 d9cffdb866a8bb27593264b3ff8631c7 732 Gene3D G3DSA:3.40.640.10 109 418 2.5E-113 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS17630 d9cffdb866a8bb27593264b3ff8631c7 732 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 576 705 1.8E-48 T 09-03-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 RG43_RS17630 d9cffdb866a8bb27593264b3ff8631c7 732 Gene3D G3DSA:3.90.1150.10 421 600 9.1E-71 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RG43_RS17630 d9cffdb866a8bb27593264b3ff8631c7 732 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 4 103 1.0E-22 T 09-03-2017 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 RG43_RS17630 d9cffdb866a8bb27593264b3ff8631c7 732 SUPERFAMILY SSF53383 109 566 4.55E-120 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS17630 d9cffdb866a8bb27593264b3ff8631c7 732 Gene3D G3DSA:3.40.50.220 1 107 1.8E-36 T 09-03-2017 IPR027464 Ornithine decarboxylase, N-terminal domain KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 RG43_RS17630 d9cffdb866a8bb27593264b3ff8631c7 732 SUPERFAMILY SSF55904 571 718 1.1E-47 T 09-03-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 RG43_RS17630 d9cffdb866a8bb27593264b3ff8631c7 732 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 109 551 2.4E-200 T 09-03-2017 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 RG43_RS17630 d9cffdb866a8bb27593264b3ff8631c7 732 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 350 364 - T 09-03-2017 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 RG43_RS17630 d9cffdb866a8bb27593264b3ff8631c7 732 Gene3D G3DSA:3.90.100.10 602 719 2.8E-39 T 09-03-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 RG43_RS08150 9a9e5547212ec6d6891361bfb20f3077 668 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 118 244 3.1E-50 T 09-03-2017 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 RG43_RS08150 9a9e5547212ec6d6891361bfb20f3077 668 Gene3D G3DSA:3.50.50.60 261 344 6.5E-26 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS08150 9a9e5547212ec6d6891361bfb20f3077 668 Gene3D G3DSA:3.50.50.60 571 645 6.5E-26 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS08150 9a9e5547212ec6d6891361bfb20f3077 668 Gene3D G3DSA:3.50.50.60 396 477 6.5E-26 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS08150 9a9e5547212ec6d6891361bfb20f3077 668 Gene3D G3DSA:3.40.50.150 11 248 2.7E-105 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS08150 9a9e5547212ec6d6891361bfb20f3077 668 SUPERFAMILY SSF51905 266 545 6.04E-30 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS08150 9a9e5547212ec6d6891361bfb20f3077 668 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 7 657 28.267 T 09-03-2017 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 RG43_RS08150 9a9e5547212ec6d6891361bfb20f3077 668 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 266 662 3.6E-154 T 09-03-2017 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 RG43_RS08150 9a9e5547212ec6d6891361bfb20f3077 668 Pfam PF01266 FAD dependent oxidoreductase 267 632 2.0E-47 T 09-03-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RG43_RS06400 fbeebc582d0236301d4e10a6515c523b 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 236 249 1.5E-33 T 09-03-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 RG43_RS06400 fbeebc582d0236301d4e10a6515c523b 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 282 298 1.5E-33 T 09-03-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 RG43_RS06400 fbeebc582d0236301d4e10a6515c523b 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 209 220 1.5E-33 T 09-03-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 RG43_RS06400 fbeebc582d0236301d4e10a6515c523b 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 1.5E-33 T 09-03-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 RG43_RS06400 fbeebc582d0236301d4e10a6515c523b 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 306 319 1.5E-33 T 09-03-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 RG43_RS06400 fbeebc582d0236301d4e10a6515c523b 876 SUPERFAMILY SSF101353 256 465 6.28E-62 T 09-03-2017 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 RG43_RS06400 fbeebc582d0236301d4e10a6515c523b 876 SUPERFAMILY SSF50447 455 551 7.24E-21 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain RG43_RS06400 fbeebc582d0236301d4e10a6515c523b 876 SMART SM00863 653 696 7.6E-22 T 09-03-2017 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RG43_RS06400 fbeebc582d0236301d4e10a6515c523b 876 SUPERFAMILY SSF55681 4 255 1.04E-108 T 09-03-2017 RG43_RS06400 fbeebc582d0236301d4e10a6515c523b 876 Gene3D G3DSA:3.30.930.10 4 251 2.6E-128 T 09-03-2017 RG43_RS06400 fbeebc582d0236301d4e10a6515c523b 876 Pfam PF02272 DHHA1 domain 800 868 6.5E-17 T 09-03-2017 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 RG43_RS06400 fbeebc582d0236301d4e10a6515c523b 876 SUPERFAMILY SSF55186 552 708 1.57E-52 T 09-03-2017 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 RG43_RS06400 fbeebc582d0236301d4e10a6515c523b 876 Pfam PF01411 tRNA synthetases class II (A) 7 556 3.1E-241 T 09-03-2017 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 RG43_RS06400 fbeebc582d0236301d4e10a6515c523b 876 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 875 210.073 T 09-03-2017 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 RG43_RS06400 fbeebc582d0236301d4e10a6515c523b 876 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 653 696 8.6E-18 T 09-03-2017 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RG43_RS06400 fbeebc582d0236301d4e10a6515c523b 876 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 854 0.0 T 09-03-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 RG43_RS08615 8b1a3426241eb91dee14d05a59da6eee 875 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 506 3.8E-153 T 09-03-2017 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS08615 8b1a3426241eb91dee14d05a59da6eee 875 Gene3D G3DSA:3.90.199.10 34 216 1.3E-83 T 09-03-2017 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 RG43_RS08615 8b1a3426241eb91dee14d05a59da6eee 875 SUPERFAMILY SSF56719 30 521 7.85E-182 T 09-03-2017 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 RG43_RS08615 8b1a3426241eb91dee14d05a59da6eee 875 Gene3D G3DSA:2.120.10.90 531 839 4.2E-139 T 09-03-2017 RG43_RS08615 8b1a3426241eb91dee14d05a59da6eee 875 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 737 8.1E-15 T 09-03-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RG43_RS08615 8b1a3426241eb91dee14d05a59da6eee 875 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 646 688 3.6E-7 T 09-03-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RG43_RS08615 8b1a3426241eb91dee14d05a59da6eee 875 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 538 584 2.0E-10 T 09-03-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RG43_RS08615 8b1a3426241eb91dee14d05a59da6eee 875 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 744 789 1.0E-13 T 09-03-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RG43_RS08615 8b1a3426241eb91dee14d05a59da6eee 875 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 588 637 7.5E-11 T 09-03-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RG43_RS08615 8b1a3426241eb91dee14d05a59da6eee 875 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 793 839 9.3E-13 T 09-03-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RG43_RS08615 8b1a3426241eb91dee14d05a59da6eee 875 Gene3D G3DSA:1.10.268.10 363 496 2.8E-49 T 09-03-2017 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS08615 8b1a3426241eb91dee14d05a59da6eee 875 SMART SM00434 11 499 3.6E-299 T 09-03-2017 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS08615 8b1a3426241eb91dee14d05a59da6eee 875 Gene3D G3DSA:3.30.1360.40 236 333 2.9E-38 T 09-03-2017 IPR024946 Arginine repressor C-terminal-like domain RG43_RS08615 8b1a3426241eb91dee14d05a59da6eee 875 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 840 0.0 T 09-03-2017 RG43_RS08615 8b1a3426241eb91dee14d05a59da6eee 875 SUPERFAMILY SSF101904 533 851 5.36E-111 T 09-03-2017 RG43_RS08615 8b1a3426241eb91dee14d05a59da6eee 875 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 841 24.527 T 09-03-2017 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RG43_RS24740 6ffbf21d1a21da7e63c34dc6d5667114 194 Pfam PF12804 MobA-like NTP transferase domain 9 160 9.4E-35 T 09-03-2017 IPR025877 MobA-like NTP transferase RG43_RS24740 6ffbf21d1a21da7e63c34dc6d5667114 194 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 7 188 1.6E-69 T 09-03-2017 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 RG43_RS24740 6ffbf21d1a21da7e63c34dc6d5667114 194 Gene3D G3DSA:3.90.550.10 4 192 1.2E-60 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS24740 6ffbf21d1a21da7e63c34dc6d5667114 194 SUPERFAMILY SSF53448 7 187 6.53E-36 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS24740 6ffbf21d1a21da7e63c34dc6d5667114 194 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 5 190 30.272 T 09-03-2017 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 RG43_RS02555 67b3cd3acf37b1f2af48454ac38e8b34 85 Gene3D G3DSA:3.30.160.140 2 84 3.2E-39 T 09-03-2017 IPR009962 Protein of unknown function DUF1488 RG43_RS02555 67b3cd3acf37b1f2af48454ac38e8b34 85 Pfam PF07369 Protein of unknown function (DUF1488) 5 84 2.3E-31 T 09-03-2017 IPR009962 Protein of unknown function DUF1488 RG43_RS02555 67b3cd3acf37b1f2af48454ac38e8b34 85 SUPERFAMILY SSF160272 2 84 1.02E-31 T 09-03-2017 IPR009962 Protein of unknown function DUF1488 RG43_RS06355 2cad4035705ebf46ae2e190058d97823 259 Gene3D G3DSA:3.40.50.720 2 256 1.6E-64 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS06355 2cad4035705ebf46ae2e190058d97823 259 SUPERFAMILY SSF51735 2 258 4.34E-64 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS06355 2cad4035705ebf46ae2e190058d97823 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 3.6E-9 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS06355 2cad4035705ebf46ae2e190058d97823 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 3.6E-9 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS06355 2cad4035705ebf46ae2e190058d97823 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 3.6E-9 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS06355 2cad4035705ebf46ae2e190058d97823 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 8.8E-19 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS06355 2cad4035705ebf46ae2e190058d97823 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 8.8E-19 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS06355 2cad4035705ebf46ae2e190058d97823 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 8.8E-19 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS06355 2cad4035705ebf46ae2e190058d97823 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 8.8E-19 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS06355 2cad4035705ebf46ae2e190058d97823 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 8.8E-19 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS06355 2cad4035705ebf46ae2e190058d97823 259 Pfam PF00106 short chain dehydrogenase 3 197 7.6E-49 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS06355 2cad4035705ebf46ae2e190058d97823 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RG43_RS21200 dae0a9e62f781f532d87e09830b57d48 551 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 118 2.8E-42 T 09-03-2017 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain RG43_RS21200 dae0a9e62f781f532d87e09830b57d48 551 SUPERFAMILY SSF53850 121 546 3.08E-65 T 09-03-2017 RG43_RS21200 dae0a9e62f781f532d87e09830b57d48 551 Gene3D G3DSA:1.10.10.10 22 95 8.9E-4 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS21200 dae0a9e62f781f532d87e09830b57d48 551 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 177 306 3.1E-18 T 09-03-2017 IPR000914 Solute-binding protein family 5 domain RG43_RS21200 dae0a9e62f781f532d87e09830b57d48 551 Gene3D G3DSA:3.90.76.10 133 266 2.9E-22 T 09-03-2017 RG43_RS21200 dae0a9e62f781f532d87e09830b57d48 551 Hamap MF_01449 HTH-type transcriptional regulator SgrR [sgrR]. 1 551 66.809 T 09-03-2017 IPR023767 Transcriptional regulator SgrR RG43_RS21200 dae0a9e62f781f532d87e09830b57d48 551 Gene3D G3DSA:3.40.190.10 267 306 1.2E-5 T 09-03-2017 RG43_RS02405 88dcf3c63abf6783733af222cd11271c 123 SUPERFAMILY SSF50193 2 122 2.35E-51 T 09-03-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RG43_RS02405 88dcf3c63abf6783733af222cd11271c 123 Gene3D G3DSA:2.40.150.20 1 123 5.2E-56 T 09-03-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RG43_RS02405 88dcf3c63abf6783733af222cd11271c 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 8.5E-55 T 09-03-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RG43_RS02405 88dcf3c63abf6783733af222cd11271c 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 09-03-2017 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02405 88dcf3c63abf6783733af222cd11271c 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 4.5E-60 T 09-03-2017 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 RG43_RS02405 88dcf3c63abf6783733af222cd11271c 123 SMART SM01374 1 123 3.7E-86 T 09-03-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RG43_RS02405 88dcf3c63abf6783733af222cd11271c 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 28.628 T 09-03-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RG43_RS12550 c1d5edc5e9edf21563e5cf3d7061ff5b 333 SUPERFAMILY SSF51556 5 326 4.64E-78 T 09-03-2017 IPR032466 Metal-dependent hydrolase RG43_RS12550 c1d5edc5e9edf21563e5cf3d7061ff5b 333 ProSitePatterns PS00485 Adenosine and AMP deaminase signature. 274 280 - T 09-03-2017 IPR006650 Adenosine/AMP deaminase active site GO:0009168|GO:0019239 Reactome: R-HSA-74217 RG43_RS12550 c1d5edc5e9edf21563e5cf3d7061ff5b 333 Gene3D G3DSA:3.20.20.140 5 332 1.4E-99 T 09-03-2017 RG43_RS12550 c1d5edc5e9edf21563e5cf3d7061ff5b 333 Hamap MF_00540 Adenosine deaminase [add]. 1 331 55.101 T 09-03-2017 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 RG43_RS12550 c1d5edc5e9edf21563e5cf3d7061ff5b 333 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 330 4.4E-110 T 09-03-2017 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 RG43_RS12550 c1d5edc5e9edf21563e5cf3d7061ff5b 333 Pfam PF00962 Adenosine/AMP deaminase 6 328 8.8E-109 T 09-03-2017 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 RG43_RS11970 252ceddb4f6b38d5b487f93f8f58ab14 753 Gene3D G3DSA:2.40.180.10 59 436 2.0E-179 T 09-03-2017 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 RG43_RS11970 252ceddb4f6b38d5b487f93f8f58ab14 753 SMART SM01060 81 469 1.5E-273 T 09-03-2017 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 RG43_RS11970 252ceddb4f6b38d5b487f93f8f58ab14 753 ProSitePatterns PS00438 Catalase proximal active site signature. 117 133 - T 09-03-2017 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 RG43_RS11970 252ceddb4f6b38d5b487f93f8f58ab14 753 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 411 419 - T 09-03-2017 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 RG43_RS11970 252ceddb4f6b38d5b487f93f8f58ab14 753 Gene3D G3DSA:3.40.50.880 600 753 2.7E-48 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like RG43_RS11970 252ceddb4f6b38d5b487f93f8f58ab14 753 SUPERFAMILY SSF56634 47 584 6.41E-226 T 09-03-2017 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 RG43_RS11970 252ceddb4f6b38d5b487f93f8f58ab14 753 Pfam PF06628 Catalase-related immune-responsive 499 562 3.1E-17 T 09-03-2017 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 RG43_RS11970 252ceddb4f6b38d5b487f93f8f58ab14 753 Pfam PF00199 Catalase 81 466 1.2E-175 T 09-03-2017 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 RG43_RS11970 252ceddb4f6b38d5b487f93f8f58ab14 753 SUPERFAMILY SSF52317 599 749 1.24E-15 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like RG43_RS11970 252ceddb4f6b38d5b487f93f8f58ab14 753 PIRSF PIRSF038927 42 751 0.0 T 09-03-2017 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 RG43_RS11970 252ceddb4f6b38d5b487f93f8f58ab14 753 PRINTS PR00067 Catalase signature 157 175 2.9E-67 T 09-03-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 RG43_RS11970 252ceddb4f6b38d5b487f93f8f58ab14 753 PRINTS PR00067 Catalase signature 178 195 2.9E-67 T 09-03-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 RG43_RS11970 252ceddb4f6b38d5b487f93f8f58ab14 753 PRINTS PR00067 Catalase signature 366 393 2.9E-67 T 09-03-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 RG43_RS11970 252ceddb4f6b38d5b487f93f8f58ab14 753 PRINTS PR00067 Catalase signature 94 117 2.9E-67 T 09-03-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 RG43_RS11970 252ceddb4f6b38d5b487f93f8f58ab14 753 PRINTS PR00067 Catalase signature 398 424 2.9E-67 T 09-03-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 RG43_RS11970 252ceddb4f6b38d5b487f93f8f58ab14 753 PRINTS PR00067 Catalase signature 197 215 2.9E-67 T 09-03-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 RG43_RS08805 2acc2416cc9b865033012006b8e41554 647 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 630 3.2E-123 T 09-03-2017 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal RG43_RS08805 2acc2416cc9b865033012006b8e41554 647 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 1.9E-60 T 09-03-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 RG43_RS08805 2acc2416cc9b865033012006b8e41554 647 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 1.9E-60 T 09-03-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 RG43_RS08805 2acc2416cc9b865033012006b8e41554 647 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 1.9E-60 T 09-03-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 RG43_RS08805 2acc2416cc9b865033012006b8e41554 647 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 1.9E-60 T 09-03-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 RG43_RS08805 2acc2416cc9b865033012006b8e41554 647 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 1.9E-60 T 09-03-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 RG43_RS08805 2acc2416cc9b865033012006b8e41554 647 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 1.9E-60 T 09-03-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 RG43_RS08805 2acc2416cc9b865033012006b8e41554 647 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 624 637 1.9E-60 T 09-03-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 RG43_RS08805 2acc2416cc9b865033012006b8e41554 647 Pfam PF01578 Cytochrome C assembly protein 89 296 7.0E-55 T 09-03-2017 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 RG43_RS08805 2acc2416cc9b865033012006b8e41554 647 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 4.5E-96 T 09-03-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RG43_RS08805 2acc2416cc9b865033012006b8e41554 647 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 4.5E-96 T 09-03-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RG43_RS08805 2acc2416cc9b865033012006b8e41554 647 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 4.5E-96 T 09-03-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RG43_RS08805 2acc2416cc9b865033012006b8e41554 647 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 4.5E-96 T 09-03-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RG43_RS08805 2acc2416cc9b865033012006b8e41554 647 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 4.5E-96 T 09-03-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RG43_RS08805 2acc2416cc9b865033012006b8e41554 647 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 4.5E-96 T 09-03-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RG43_RS08805 2acc2416cc9b865033012006b8e41554 647 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 4.5E-96 T 09-03-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RG43_RS08805 2acc2416cc9b865033012006b8e41554 647 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 4.5E-96 T 09-03-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RG43_RS08805 2acc2416cc9b865033012006b8e41554 647 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 634 0.0 T 09-03-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 RG43_RS02420 7db5f0a9ed08d687fd023064e70bb876 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 09-03-2017 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02420 7db5f0a9ed08d687fd023064e70bb876 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 9.5E-27 T 09-03-2017 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS02420 7db5f0a9ed08d687fd023064e70bb876 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 26.352 T 09-03-2017 IPR023036 Ribosomal protein S14, bacterial/plastid RG43_RS02420 7db5f0a9ed08d687fd023064e70bb876 101 SUPERFAMILY SSF57716 2 101 8.55E-38 T 09-03-2017 RG43_RS02420 7db5f0a9ed08d687fd023064e70bb876 101 Gene3D G3DSA:4.10.830.10 41 101 2.8E-31 T 09-03-2017 RG43_RS02325 5db727804af19d391752f4bc2af2ffd8 493 Gene3D G3DSA:3.30.450.90 85 213 3.7E-52 T 09-03-2017 RG43_RS02325 5db727804af19d391752f4bc2af2ffd8 493 Pfam PF00437 Type II/IV secretion system protein 114 380 6.3E-89 T 09-03-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RG43_RS02325 5db727804af19d391752f4bc2af2ffd8 493 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 308 322 - T 09-03-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RG43_RS02325 5db727804af19d391752f4bc2af2ffd8 493 SMART SM00382 241 383 4.4E-6 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS02325 5db727804af19d391752f4bc2af2ffd8 493 SUPERFAMILY SSF52540 94 484 2.81E-105 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS02325 5db727804af19d391752f4bc2af2ffd8 493 Gene3D G3DSA:3.40.50.300 219 486 1.1E-100 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS02325 5db727804af19d391752f4bc2af2ffd8 493 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 25 484 7.1E-198 T 09-03-2017 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 RG43_RS06780 7e6fbfe37775e14fc8ba1a3bc33722b6 432 ProSitePatterns PS00217 Sugar transport proteins signature 2. 133 158 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RG43_RS06780 7e6fbfe37775e14fc8ba1a3bc33722b6 432 ProSitePatterns PS00216 Sugar transport proteins signature 1. 299 316 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RG43_RS06780 7e6fbfe37775e14fc8ba1a3bc33722b6 432 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 30 417 1.7E-146 T 09-03-2017 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 RG43_RS06780 7e6fbfe37775e14fc8ba1a3bc33722b6 432 SUPERFAMILY SSF103473 18 430 1.57E-64 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS06780 7e6fbfe37775e14fc8ba1a3bc33722b6 432 Pfam PF00083 Sugar (and other) transporter 24 221 4.6E-26 T 09-03-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RG43_RS06780 7e6fbfe37775e14fc8ba1a3bc33722b6 432 Pfam PF00083 Sugar (and other) transporter 223 421 6.7E-12 T 09-03-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RG43_RS06780 7e6fbfe37775e14fc8ba1a3bc33722b6 432 Gene3D G3DSA:1.20.1250.20 240 428 3.7E-18 T 09-03-2017 RG43_RS06780 7e6fbfe37775e14fc8ba1a3bc33722b6 432 Gene3D G3DSA:1.20.1250.20 22 227 3.0E-25 T 09-03-2017 RG43_RS21995 32800b888f048de6c819634530713340 113 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 1 111 1.0E-39 T 09-03-2017 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 RG43_RS21995 32800b888f048de6c819634530713340 113 SUPERFAMILY SSF51621 1 111 1.94E-42 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RG43_RS21995 32800b888f048de6c819634530713340 113 Gene3D G3DSA:3.20.20.60 1 111 9.2E-42 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RG43_RS21995 32800b888f048de6c819634530713340 113 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 19 37 - T 09-03-2017 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 RG43_RS21995 32800b888f048de6c819634530713340 113 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 19 34 1.7E-13 T 09-03-2017 RG43_RS21995 32800b888f048de6c819634530713340 113 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 36 51 1.7E-13 T 09-03-2017 RG43_RS21995 32800b888f048de6c819634530713340 113 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 72 84 1.7E-13 T 09-03-2017 RG43_RS09830 e00b4c5a7f21fce594812b11ba189e40 131 Pfam PF04363 Protein of unknown function (DUF496) 30 121 5.5E-46 T 09-03-2017 IPR007458 Protein of unknown function DUF496 RG43_RS09830 e00b4c5a7f21fce594812b11ba189e40 131 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 33 120 2.0E-43 T 09-03-2017 IPR007458 Protein of unknown function DUF496 RG43_RS09830 e00b4c5a7f21fce594812b11ba189e40 131 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 30 124 25.713 T 09-03-2017 IPR007458 Protein of unknown function DUF496 RG43_RS09830 e00b4c5a7f21fce594812b11ba189e40 131 PIRSF PIRSF028773 23 131 1.4E-53 T 09-03-2017 IPR007458 Protein of unknown function DUF496 RG43_RS14910 49485f7d044f118248c938a7084f0962 348 PIRSF PIRSF019574 1 348 3.2E-135 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 RG43_RS14910 49485f7d044f118248c938a7084f0962 348 SUPERFAMILY SSF53850 27 345 6.79E-98 T 09-03-2017 RG43_RS14910 49485f7d044f118248c938a7084f0962 348 Gene3D G3DSA:3.40.190.10 26 132 3.9E-65 T 09-03-2017 RG43_RS14910 49485f7d044f118248c938a7084f0962 348 Gene3D G3DSA:3.40.190.10 270 313 3.9E-65 T 09-03-2017 RG43_RS14910 49485f7d044f118248c938a7084f0962 348 Gene3D G3DSA:3.40.190.10 134 269 7.4E-26 T 09-03-2017 RG43_RS14910 49485f7d044f118248c938a7084f0962 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 76 90 5.3E-97 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 RG43_RS14910 49485f7d044f118248c938a7084f0962 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 204 223 5.3E-97 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 RG43_RS14910 49485f7d044f118248c938a7084f0962 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 149 163 5.3E-97 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 RG43_RS14910 49485f7d044f118248c938a7084f0962 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 5.3E-97 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 RG43_RS14910 49485f7d044f118248c938a7084f0962 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 167 186 5.3E-97 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 RG43_RS14910 49485f7d044f118248c938a7084f0962 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 123 139 5.3E-97 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 RG43_RS14910 49485f7d044f118248c938a7084f0962 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 293 319 5.3E-97 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 RG43_RS14910 49485f7d044f118248c938a7084f0962 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 5.3E-97 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 RG43_RS14910 49485f7d044f118248c938a7084f0962 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 248 267 5.3E-97 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 RG43_RS14910 49485f7d044f118248c938a7084f0962 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 92 105 5.3E-97 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 RG43_RS14910 49485f7d044f118248c938a7084f0962 348 Pfam PF13416 Bacterial extracellular solute-binding protein 42 313 5.0E-39 T 09-03-2017 RG43_RS17140 9000c6db8ffabe42fd4ff9bc4cefe10d 356 SUPERFAMILY SSF54171 11 59 1.7E-21 T 09-03-2017 IPR016177 DNA-binding domain GO:0003677 RG43_RS17140 9000c6db8ffabe42fd4ff9bc4cefe10d 356 SUPERFAMILY SSF56349 74 347 1.24E-64 T 09-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RG43_RS17140 9000c6db8ffabe42fd4ff9bc4cefe10d 356 Pfam PF00589 Phage integrase family 179 344 1.8E-35 T 09-03-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RG43_RS17140 9000c6db8ffabe42fd4ff9bc4cefe10d 356 Gene3D G3DSA:1.10.150.130 75 176 1.1E-37 T 09-03-2017 IPR023109 Integrase/recombinase, N-terminal RG43_RS17140 9000c6db8ffabe42fd4ff9bc4cefe10d 356 Pfam PF09003 Bacteriophage lambda integrase, N-terminal domain 1 69 1.3E-24 T 09-03-2017 IPR015094 Integrase, lambda-type, N-terminal DNA-binding GO:0003677|GO:0008907|GO:0015074 RG43_RS17140 9000c6db8ffabe42fd4ff9bc4cefe10d 356 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 81 158 8.1E-7 T 09-03-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RG43_RS17140 9000c6db8ffabe42fd4ff9bc4cefe10d 356 Gene3D G3DSA:1.10.443.10 178 352 2.1E-49 T 09-03-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RG43_RS17140 9000c6db8ffabe42fd4ff9bc4cefe10d 356 Gene3D G3DSA:3.30.160.60 1 63 2.6E-31 T 09-03-2017 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 RG43_RS20930 f39415536b3dfb8db659f958b26477a4 264 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 3 261 1.3E-148 T 09-03-2017 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 RG43_RS20930 f39415536b3dfb8db659f958b26477a4 264 Pfam PF02675 S-adenosylmethionine decarboxylase 33 169 2.4E-30 T 09-03-2017 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 RG43_RS20930 f39415536b3dfb8db659f958b26477a4 264 PIRSF PIRSF001356 1 263 6.4E-156 T 09-03-2017 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 RG43_RS20930 f39415536b3dfb8db659f958b26477a4 264 Gene3D G3DSA:3.60.90.10 33 186 5.3E-47 T 09-03-2017 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 RG43_RS20930 f39415536b3dfb8db659f958b26477a4 264 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 264 175.398 T 09-03-2017 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 RG43_RS20930 f39415536b3dfb8db659f958b26477a4 264 SUPERFAMILY SSF56276 112 173 5.1E-23 T 09-03-2017 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 RG43_RS20930 f39415536b3dfb8db659f958b26477a4 264 SUPERFAMILY SSF56276 41 84 5.1E-23 T 09-03-2017 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 RG43_RS22245 9d0c600b70c827b4f4c4c35dd66337e1 311 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 1.5E-126 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RG43_RS22245 9d0c600b70c827b4f4c4c35dd66337e1 311 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RG43_RS22245 9d0c600b70c827b4f4c4c35dd66337e1 311 Gene3D G3DSA:3.40.50.1370 7 144 1.3E-52 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RG43_RS22245 9d0c600b70c827b4f4c4c35dd66337e1 311 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 2.7E-45 T 09-03-2017 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 RG43_RS22245 9d0c600b70c827b4f4c4c35dd66337e1 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 3.6E-36 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RG43_RS22245 9d0c600b70c827b4f4c4c35dd66337e1 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 3.6E-36 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RG43_RS22245 9d0c600b70c827b4f4c4c35dd66337e1 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 3.6E-36 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RG43_RS22245 9d0c600b70c827b4f4c4c35dd66337e1 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 3.6E-36 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RG43_RS22245 9d0c600b70c827b4f4c4c35dd66337e1 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 3.6E-36 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RG43_RS22245 9d0c600b70c827b4f4c4c35dd66337e1 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 3.6E-36 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RG43_RS22245 9d0c600b70c827b4f4c4c35dd66337e1 311 SUPERFAMILY SSF53671 4 306 7.73E-101 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RG43_RS22245 9d0c600b70c827b4f4c4c35dd66337e1 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 5.7E-25 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RG43_RS22245 9d0c600b70c827b4f4c4c35dd66337e1 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 5.7E-25 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RG43_RS22245 9d0c600b70c827b4f4c4c35dd66337e1 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 5.7E-25 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RG43_RS22245 9d0c600b70c827b4f4c4c35dd66337e1 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 5.7E-25 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RG43_RS22245 9d0c600b70c827b4f4c4c35dd66337e1 311 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.022 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RG43_RS22245 9d0c600b70c827b4f4c4c35dd66337e1 311 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 4.2E-29 T 09-03-2017 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 RG43_RS22245 9d0c600b70c827b4f4c4c35dd66337e1 311 Gene3D G3DSA:3.40.50.1370 145 292 2.5E-56 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RG43_RS19265 476af149abb2d5bb689a330ce7619797 360 SUPERFAMILY SSF53822 61 326 1.63E-55 T 09-03-2017 IPR028082 Periplasmic binding protein-like I RG43_RS19265 476af149abb2d5bb689a330ce7619797 360 Pfam PF13377 Periplasmic binding protein-like domain 171 329 3.3E-33 T 09-03-2017 RG43_RS19265 476af149abb2d5bb689a330ce7619797 360 Gene3D G3DSA:3.40.50.2300 177 311 1.3E-45 T 09-03-2017 RG43_RS19265 476af149abb2d5bb689a330ce7619797 360 SUPERFAMILY SSF47413 2 61 7.74E-18 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS19265 476af149abb2d5bb689a330ce7619797 360 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 50 4.6E-22 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS19265 476af149abb2d5bb689a330ce7619797 360 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 09-03-2017 RG43_RS19265 476af149abb2d5bb689a330ce7619797 360 SMART SM00354 3 73 1.3E-33 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS19265 476af149abb2d5bb689a330ce7619797 360 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 15 25 3.3E-5 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS19265 476af149abb2d5bb689a330ce7619797 360 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 5 15 3.3E-5 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS19265 476af149abb2d5bb689a330ce7619797 360 Gene3D G3DSA:1.10.260.40 4 64 9.6E-25 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS19265 476af149abb2d5bb689a330ce7619797 360 Gene3D G3DSA:3.40.50.2300 65 176 7.1E-42 T 09-03-2017 RG43_RS06345 4253926988a16ba07678e8f4c3555b1c 257 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 2.1E-21 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RG43_RS06345 4253926988a16ba07678e8f4c3555b1c 257 SUPERFAMILY SSF46785 4 61 1.32E-12 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS06345 4253926988a16ba07678e8f4c3555b1c 257 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 09-03-2017 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 RG43_RS06345 4253926988a16ba07678e8f4c3555b1c 257 SUPERFAMILY SSF100950 73 234 1.12E-36 T 09-03-2017 RG43_RS06345 4253926988a16ba07678e8f4c3555b1c 257 SMART SM01134 72 233 7.1E-72 T 09-03-2017 RG43_RS06345 4253926988a16ba07678e8f4c3555b1c 257 Pfam PF00455 DeoR C terminal sensor domain 74 231 7.5E-52 T 09-03-2017 IPR014036 DeoR C-terminal sensor domain RG43_RS06345 4253926988a16ba07678e8f4c3555b1c 257 Gene3D G3DSA:3.40.50.1360 76 215 9.0E-17 T 09-03-2017 RG43_RS06345 4253926988a16ba07678e8f4c3555b1c 257 SMART SM00420 6 58 3.9E-23 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RG43_RS06345 4253926988a16ba07678e8f4c3555b1c 257 Gene3D G3DSA:1.10.10.10 1 60 5.9E-10 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS10790 293b9deb027df8d9ef2cd108a8c4b617 140 Pfam PF02586 SOS response associated peptidase (SRAP) 1 132 6.8E-30 T 09-03-2017 IPR003738 SOS response associated peptidase (SRAP) RG43_RS10790 293b9deb027df8d9ef2cd108a8c4b617 140 SUPERFAMILY SSF143081 2 136 1.31E-37 T 09-03-2017 IPR003738 SOS response associated peptidase (SRAP) RG43_RS10790 293b9deb027df8d9ef2cd108a8c4b617 140 Gene3D G3DSA:3.90.1680.10 1 133 1.1E-38 T 09-03-2017 IPR003738 SOS response associated peptidase (SRAP) RG43_RS25205 be660d7c1d4beea61719d514f91e9b36 420 SUPERFAMILY SSF51735 5 198 6.85E-46 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS25205 be660d7c1d4beea61719d514f91e9b36 420 SUPERFAMILY SSF52413 311 419 2.88E-24 T 09-03-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 RG43_RS25205 be660d7c1d4beea61719d514f91e9b36 420 SMART SM00984 324 420 3.9E-21 T 09-03-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 RG43_RS25205 be660d7c1d4beea61719d514f91e9b36 420 Gene3D G3DSA:3.40.50.720 237 419 1.1E-45 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS25205 be660d7c1d4beea61719d514f91e9b36 420 SUPERFAMILY SSF48179 206 298 2.72E-28 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RG43_RS25205 be660d7c1d4beea61719d514f91e9b36 420 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 324 419 5.2E-18 T 09-03-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 RG43_RS25205 be660d7c1d4beea61719d514f91e9b36 420 PIRSF PIRSF500136 1 420 5.6E-148 T 09-03-2017 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 RG43_RS25205 be660d7c1d4beea61719d514f91e9b36 420 Hamap MF_02029 UDP-N-acetyl-D-mannosamine dehydrogenase [wecC]. 1 420 74.026 T 09-03-2017 IPR032891 UDP-N-acetyl-D-mannosamine dehydrogenase WecC GO:0009246|GO:0089714 KEGG: 00520+1.1.1.336|MetaCyc: PWY-7335 RG43_RS25205 be660d7c1d4beea61719d514f91e9b36 420 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 5 416 4.8E-119 T 09-03-2017 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 RG43_RS25205 be660d7c1d4beea61719d514f91e9b36 420 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 206 293 1.2E-26 T 09-03-2017 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 RG43_RS25205 be660d7c1d4beea61719d514f91e9b36 420 PIRSF PIRSF000124 4 419 1.6E-77 T 09-03-2017 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 RG43_RS25205 be660d7c1d4beea61719d514f91e9b36 420 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 5 188 4.9E-60 T 09-03-2017 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 RG43_RS25205 be660d7c1d4beea61719d514f91e9b36 420 Gene3D G3DSA:3.40.50.720 3 227 4.4E-63 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS05035 244d5c135050a2dbef58666e0f94b278 83 Pfam PF10885 Protein of unknown function (DUF2684) 3 79 1.8E-22 T 09-03-2017 IPR020263 Uncharacterised protein family YqgD RG43_RS05035 244d5c135050a2dbef58666e0f94b278 83 ProDom PD060540 YQGD INNER MEMBRANE ECS3817 1 83 2.0E-42 T 09-03-2017 IPR020263 Uncharacterised protein family YqgD RG43_RS18880 ef79bf218c1386a71e2de22e786c0433 482 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 377 3.5E-147 T 09-03-2017 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 RG43_RS18880 ef79bf218c1386a71e2de22e786c0433 482 Gene3D G3DSA:3.40.50.620 173 333 1.1E-37 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS18880 ef79bf218c1386a71e2de22e786c0433 482 Pfam PF02926 THUMP domain 28 161 2.6E-29 T 09-03-2017 IPR004114 THUMP domain GO:0003723 RG43_RS18880 ef79bf218c1386a71e2de22e786c0433 482 Gene3D G3DSA:3.40.250.10 405 480 4.6E-8 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS18880 ef79bf218c1386a71e2de22e786c0433 482 SUPERFAMILY SSF52821 405 481 2.19E-9 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS18880 ef79bf218c1386a71e2de22e786c0433 482 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 482 232.74 T 09-03-2017 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 RG43_RS18880 ef79bf218c1386a71e2de22e786c0433 482 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 383 482 8.2E-41 T 09-03-2017 IPR026340 Thiazole biosynthesis domain GO:0052837 RG43_RS18880 ef79bf218c1386a71e2de22e786c0433 482 SUPERFAMILY SSF143437 1 173 2.96E-51 T 09-03-2017 RG43_RS18880 ef79bf218c1386a71e2de22e786c0433 482 SMART SM00981 75 165 9.9E-27 T 09-03-2017 IPR004114 THUMP domain GO:0003723 RG43_RS18880 ef79bf218c1386a71e2de22e786c0433 482 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 1.2E-81 T 09-03-2017 IPR020536 Thil, AANH domain GO:0004810 RG43_RS18880 ef79bf218c1386a71e2de22e786c0433 482 SUPERFAMILY SSF52402 174 372 7.28E-42 T 09-03-2017 RG43_RS23745 09a424d8e3c7fa52971b111dfcefb05e 66 SUPERFAMILY SSF54285 1 66 4.36E-19 T 09-03-2017 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RG43_RS23745 09a424d8e3c7fa52971b111dfcefb05e 66 Pfam PF02597 ThiS family 3 66 1.2E-17 T 09-03-2017 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 RG43_RS23745 09a424d8e3c7fa52971b111dfcefb05e 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 4 66 1.2E-20 T 09-03-2017 IPR010035 ThiS, thiamine-biosynthesis RG43_RS23745 09a424d8e3c7fa52971b111dfcefb05e 66 Gene3D G3DSA:3.10.20.30 1 66 9.0E-26 T 09-03-2017 IPR012675 Beta-grasp domain RG43_RS17400 d58a08a8499799efa72d9df42f21ed0f 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 09-03-2017 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 RG43_RS17400 d58a08a8499799efa72d9df42f21ed0f 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 2.0E-35 T 09-03-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 RG43_RS17400 d58a08a8499799efa72d9df42f21ed0f 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 5.5E-5 T 09-03-2017 RG43_RS17400 d58a08a8499799efa72d9df42f21ed0f 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 368 390 5.5E-5 T 09-03-2017 RG43_RS17400 d58a08a8499799efa72d9df42f21ed0f 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 5.2E-242 T 09-03-2017 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 RG43_RS17400 d58a08a8499799efa72d9df42f21ed0f 588 SUPERFAMILY SSF46977 452 588 2.88E-46 T 09-03-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 RG43_RS17400 d58a08a8499799efa72d9df42f21ed0f 588 SUPERFAMILY SSF51905 4 259 1.97E-75 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS17400 d58a08a8499799efa72d9df42f21ed0f 588 SUPERFAMILY SSF51905 359 440 1.97E-75 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS17400 d58a08a8499799efa72d9df42f21ed0f 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 1.8E-278 T 09-03-2017 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 RG43_RS17400 d58a08a8499799efa72d9df42f21ed0f 588 PIRSF PIRSF000171 1 579 4.0E-47 T 09-03-2017 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit Reactome: R-HSA-611105|Reactome: R-HSA-71403 RG43_RS17400 d58a08a8499799efa72d9df42f21ed0f 588 Gene3D G3DSA:1.20.58.100 433 547 6.0E-38 T 09-03-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 RG43_RS17400 d58a08a8499799efa72d9df42f21ed0f 588 SUPERFAMILY SSF56425 236 356 4.64E-42 T 09-03-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 RG43_RS17400 d58a08a8499799efa72d9df42f21ed0f 588 Gene3D G3DSA:3.90.700.10 243 349 1.5E-40 T 09-03-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 RG43_RS17400 d58a08a8499799efa72d9df42f21ed0f 588 Gene3D G3DSA:4.10.80.40 548 588 2.7E-21 T 09-03-2017 RG43_RS17400 d58a08a8499799efa72d9df42f21ed0f 588 Pfam PF00890 FAD binding domain 9 405 2.5E-118 T 09-03-2017 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 RG43_RS17400 d58a08a8499799efa72d9df42f21ed0f 588 Gene3D G3DSA:3.50.50.60 351 425 2.5E-119 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS17400 d58a08a8499799efa72d9df42f21ed0f 588 Gene3D G3DSA:3.50.50.60 6 242 2.5E-119 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS16760 ec0a6df625d8492ad92d6b933cb6f65f 673 SUPERFAMILY SSF52540 3 415 3.0E-139 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16760 ec0a6df625d8492ad92d6b933cb6f65f 673 Gene3D G3DSA:4.10.860.10 622 670 5.6E-19 T 09-03-2017 IPR001943 UVR domain GO:0005515 RG43_RS16760 ec0a6df625d8492ad92d6b933cb6f65f 673 Pfam PF00271 Helicase conserved C-terminal domain 434 545 1.1E-18 T 09-03-2017 IPR001650 Helicase, C-terminal RG43_RS16760 ec0a6df625d8492ad92d6b933cb6f65f 673 SUPERFAMILY SSF46600 624 669 1.31E-11 T 09-03-2017 IPR001943 UVR domain GO:0005515 RG43_RS16760 ec0a6df625d8492ad92d6b933cb6f65f 673 Gene3D G3DSA:3.40.50.300 419 582 5.6E-39 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16760 ec0a6df625d8492ad92d6b933cb6f65f 673 SUPERFAMILY SSF52540 459 581 1.07E-35 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16760 ec0a6df625d8492ad92d6b933cb6f65f 673 SUPERFAMILY SSF52540 37 82 1.07E-35 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16760 ec0a6df625d8492ad92d6b933cb6f65f 673 SMART SM00487 9 425 6.3E-28 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain RG43_RS16760 ec0a6df625d8492ad92d6b933cb6f65f 673 Pfam PF04851 Type III restriction enzyme, res subunit 13 92 2.3E-9 T 09-03-2017 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 RG43_RS16760 ec0a6df625d8492ad92d6b933cb6f65f 673 Gene3D G3DSA:3.40.50.300 278 338 1.2E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16760 ec0a6df625d8492ad92d6b933cb6f65f 673 Gene3D G3DSA:3.40.50.300 5 89 1.2E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16760 ec0a6df625d8492ad92d6b933cb6f65f 673 Gene3D G3DSA:3.40.50.300 388 408 1.2E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16760 ec0a6df625d8492ad92d6b933cb6f65f 673 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 666 0.0 T 09-03-2017 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 RG43_RS16760 ec0a6df625d8492ad92d6b933cb6f65f 673 Pfam PF12344 Ultra-violet resistance protein B 552 593 1.1E-21 T 09-03-2017 IPR024759 UvrB, YAD/RRR-motif-containing domain RG43_RS16760 ec0a6df625d8492ad92d6b933cb6f65f 673 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 668 44.417 T 09-03-2017 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 RG43_RS16760 ec0a6df625d8492ad92d6b933cb6f65f 673 SMART SM00490 460 546 3.8E-20 T 09-03-2017 IPR001650 Helicase, C-terminal RG43_RS16760 ec0a6df625d8492ad92d6b933cb6f65f 673 Pfam PF02151 UvrB/uvrC motif 634 667 1.7E-6 T 09-03-2017 IPR001943 UVR domain GO:0005515 RG43_RS16760 ec0a6df625d8492ad92d6b933cb6f65f 673 Gene3D G3DSA:3.30.2060.10 159 231 6.9E-11 T 09-03-2017 RG43_RS12825 62e838a9e9459c75060c1ea593e2b86b 681 Gene3D G3DSA:1.20.1050.40 12 143 5.1E-18 T 09-03-2017 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal RG43_RS12825 62e838a9e9459c75060c1ea593e2b86b 681 Pfam PF01432 Peptidase family M3 230 678 7.2E-147 T 09-03-2017 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 RG43_RS12825 62e838a9e9459c75060c1ea593e2b86b 681 Gene3D G3DSA:1.10.1370.10 505 680 3.1E-110 T 09-03-2017 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 RG43_RS12825 62e838a9e9459c75060c1ea593e2b86b 681 Gene3D G3DSA:1.10.1370.10 146 352 3.1E-110 T 09-03-2017 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 RG43_RS12825 62e838a9e9459c75060c1ea593e2b86b 681 SUPERFAMILY SSF55486 5 679 1.19E-171 T 09-03-2017 RG43_RS12825 62e838a9e9459c75060c1ea593e2b86b 681 Gene3D G3DSA:3.40.390.10 362 504 2.8E-51 T 09-03-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 RG43_RS02440 5e26b9261841fedfc3f886e196ad600b 167 SUPERFAMILY SSF54211 79 159 3.54E-27 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold RG43_RS02440 5e26b9261841fedfc3f886e196ad600b 167 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 157 1.7E-30 T 09-03-2017 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 RG43_RS02440 5e26b9261841fedfc3f886e196ad600b 167 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 09-03-2017 IPR018192 Ribosomal protein S5, N-terminal, conserved site RG43_RS02440 5e26b9261841fedfc3f886e196ad600b 167 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 34.99 T 09-03-2017 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 RG43_RS02440 5e26b9261841fedfc3f886e196ad600b 167 Pfam PF00333 Ribosomal protein S5, N-terminal domain 11 74 1.5E-29 T 09-03-2017 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 RG43_RS02440 5e26b9261841fedfc3f886e196ad600b 167 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 1.4E-71 T 09-03-2017 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 RG43_RS02440 5e26b9261841fedfc3f886e196ad600b 167 Gene3D G3DSA:3.30.160.20 10 72 7.0E-31 T 09-03-2017 IPR014720 Double-stranded RNA-binding domain RG43_RS02440 5e26b9261841fedfc3f886e196ad600b 167 SUPERFAMILY SSF54768 9 75 5.13E-24 T 09-03-2017 RG43_RS02440 5e26b9261841fedfc3f886e196ad600b 167 Gene3D G3DSA:3.30.230.10 76 159 1.1E-33 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RG43_RS23625 852c6259da6439d05954d156b8e294df 147 Pfam PF13673 Acetyltransferase (GNAT) domain 40 130 4.4E-16 T 09-03-2017 IPR000182 GNAT domain GO:0008080 RG43_RS23625 852c6259da6439d05954d156b8e294df 147 Gene3D G3DSA:3.40.630.30 1 141 5.5E-28 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS23625 852c6259da6439d05954d156b8e294df 147 SUPERFAMILY SSF55729 3 139 1.54E-26 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS02870 6d009ab9d5f35a3f58241b7a35cf21ac 229 Gene3D G3DSA:3.20.20.70 9 226 9.7E-92 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS02870 6d009ab9d5f35a3f58241b7a35cf21ac 229 SUPERFAMILY SSF51366 14 224 1.77E-56 T 09-03-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RG43_RS02870 6d009ab9d5f35a3f58241b7a35cf21ac 229 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 11 225 38.055 T 09-03-2017 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 RG43_RS02870 6d009ab9d5f35a3f58241b7a35cf21ac 229 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 35 226 1.2E-92 T 09-03-2017 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 RG43_RS18820 a3aebedd25ddedfe1ade83d1e8475627 105 SUPERFAMILY SSF82657 1 89 7.85E-31 T 09-03-2017 IPR002634 BolA protein RG43_RS18820 a3aebedd25ddedfe1ade83d1e8475627 105 Pfam PF01722 BolA-like protein 11 84 1.7E-29 T 09-03-2017 IPR002634 BolA protein RG43_RS18820 a3aebedd25ddedfe1ade83d1e8475627 105 PIRSF PIRSF003113 1 100 9.8E-34 T 09-03-2017 IPR002634 BolA protein RG43_RS18820 a3aebedd25ddedfe1ade83d1e8475627 105 Gene3D G3DSA:3.30.300.90 1 101 5.0E-32 T 09-03-2017 IPR002634 BolA protein RG43_RS13970 a230f23e6042893420822db67a035b0e 373 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 58 281 2.8E-15 T 09-03-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RG43_RS13970 a230f23e6042893420822db67a035b0e 373 Gene3D G3DSA:2.40.50.100 58 90 7.5E-26 T 09-03-2017 RG43_RS13970 a230f23e6042893420822db67a035b0e 373 Gene3D G3DSA:2.40.50.100 165 198 7.5E-26 T 09-03-2017 RG43_RS13970 a230f23e6042893420822db67a035b0e 373 SUPERFAMILY SSF111369 45 288 9.29E-80 T 09-03-2017 RG43_RS13970 a230f23e6042893420822db67a035b0e 373 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 32 363 3.3E-82 T 09-03-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RG43_RS13970 a230f23e6042893420822db67a035b0e 373 Pfam PF00529 HlyD membrane-fusion protein of T1SS 32 348 1.7E-7 T 09-03-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RG43_RS15020 bcf0eda5bf6c0577bd8206fa6c2906b2 477 Pfam PF00367 phosphotransferase system, EIIB 405 436 7.3E-14 T 09-03-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 RG43_RS15020 bcf0eda5bf6c0577bd8206fa6c2906b2 477 Pfam PF02378 Phosphotransferase system, EIIC 13 320 6.7E-85 T 09-03-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 RG43_RS15020 bcf0eda5bf6c0577bd8206fa6c2906b2 477 SUPERFAMILY SSF55604 401 474 6.67E-21 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RG43_RS15020 bcf0eda5bf6c0577bd8206fa6c2906b2 477 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 378 460 2.6E-25 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RG43_RS15020 bcf0eda5bf6c0577bd8206fa6c2906b2 477 Gene3D G3DSA:3.30.1360.60 399 474 5.8E-28 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RG43_RS15020 bcf0eda5bf6c0577bd8206fa6c2906b2 477 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 414 431 - T 09-03-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 RG43_RS15020 bcf0eda5bf6c0577bd8206fa6c2906b2 477 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 475 1.2E-235 T 09-03-2017 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0015758|GO:0016021 RG43_RS15020 bcf0eda5bf6c0577bd8206fa6c2906b2 477 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 52 331 1.5E-90 T 09-03-2017 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 RG43_RS00200 0be07b2196583394c2f046d8469dae83 90 Gene3D G3DSA:3.40.50.270 2 87 2.8E-14 T 09-03-2017 RG43_RS00200 0be07b2196583394c2f046d8469dae83 90 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 83 1.2E-16 T 09-03-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RG43_RS00200 0be07b2196583394c2f046d8469dae83 90 SUPERFAMILY SSF52794 1 87 4.45E-21 T 09-03-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RG43_RS26490 0361392db90635ff9ecb168e7222163f 219 SMART SM00862 145 216 2.3E-24 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RG43_RS26490 0361392db90635ff9ecb168e7222163f 219 SUPERFAMILY SSF52172 1 173 4.98E-35 T 09-03-2017 IPR011006 CheY-like superfamily RG43_RS26490 0361392db90635ff9ecb168e7222163f 219 Pfam PF00072 Response regulator receiver domain 3 112 1.4E-21 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS26490 0361392db90635ff9ecb168e7222163f 219 SMART SM00448 1 112 8.9E-38 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS26490 0361392db90635ff9ecb168e7222163f 219 Gene3D G3DSA:1.10.10.10 122 217 9.9E-29 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS26490 0361392db90635ff9ecb168e7222163f 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 9.5E-23 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RG43_RS26490 0361392db90635ff9ecb168e7222163f 219 Gene3D G3DSA:3.40.50.2300 1 121 1.2E-35 T 09-03-2017 RG43_RS04115 0361392db90635ff9ecb168e7222163f 219 SMART SM00862 145 216 2.3E-24 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RG43_RS04115 0361392db90635ff9ecb168e7222163f 219 SUPERFAMILY SSF52172 1 173 4.98E-35 T 09-03-2017 IPR011006 CheY-like superfamily RG43_RS04115 0361392db90635ff9ecb168e7222163f 219 Pfam PF00072 Response regulator receiver domain 3 112 1.4E-21 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS04115 0361392db90635ff9ecb168e7222163f 219 SMART SM00448 1 112 8.9E-38 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS04115 0361392db90635ff9ecb168e7222163f 219 Gene3D G3DSA:1.10.10.10 122 217 9.9E-29 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS04115 0361392db90635ff9ecb168e7222163f 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 9.5E-23 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RG43_RS04115 0361392db90635ff9ecb168e7222163f 219 Gene3D G3DSA:3.40.50.2300 1 121 1.2E-35 T 09-03-2017 RG43_RS18605 a70c385ed4ef646813b66a776e551d55 320 Pfam PF00762 Ferrochelatase 5 317 8.4E-110 T 09-03-2017 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 RG43_RS18605 a70c385ed4ef646813b66a776e551d55 320 ProSitePatterns PS00534 Ferrochelatase signature. 189 207 - T 09-03-2017 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 RG43_RS18605 a70c385ed4ef646813b66a776e551d55 320 Gene3D G3DSA:3.40.50.1400 202 317 2.7E-32 T 09-03-2017 RG43_RS18605 a70c385ed4ef646813b66a776e551d55 320 SUPERFAMILY SSF53800 4 318 4.06E-101 T 09-03-2017 RG43_RS18605 a70c385ed4ef646813b66a776e551d55 320 Gene3D G3DSA:3.40.50.1400 3 201 7.6E-68 T 09-03-2017 RG43_RS18605 a70c385ed4ef646813b66a776e551d55 320 Hamap MF_00323 Ferrochelatase [hemH]. 4 320 38.44 T 09-03-2017 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 RG43_RS18605 a70c385ed4ef646813b66a776e551d55 320 TIGRFAM TIGR00109 hemH: ferrochelatase 1 319 5.8E-135 T 09-03-2017 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 RG43_RS23060 c428876159d410a0a903201d793f88e0 262 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS23060 c428876159d410a0a903201d793f88e0 262 SUPERFAMILY SSF52540 3 237 9.04E-60 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS23060 c428876159d410a0a903201d793f88e0 262 SMART SM00382 29 229 5.7E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS23060 c428876159d410a0a903201d793f88e0 262 Pfam PF00005 ABC transporter 20 181 3.4E-35 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS23060 c428876159d410a0a903201d793f88e0 262 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 4 250 3.5E-104 T 09-03-2017 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 RG43_RS23060 c428876159d410a0a903201d793f88e0 262 Gene3D G3DSA:3.40.50.300 3 243 1.7E-65 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS14520 c485b5fdc684edae6436f160d3e418d7 559 Pfam PF00916 Sulfate permease family 29 411 1.1E-75 T 09-03-2017 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 RG43_RS14520 c485b5fdc684edae6436f160d3e418d7 559 Gene3D G3DSA:3.30.750.24 453 558 2.6E-13 T 09-03-2017 IPR002645 STAS domain RG43_RS14520 c485b5fdc684edae6436f160d3e418d7 559 TIGRFAM TIGR00815 sulP: sulfate permease 18 555 1.2E-149 T 09-03-2017 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 RG43_RS14520 c485b5fdc684edae6436f160d3e418d7 559 SUPERFAMILY SSF52091 452 557 2.94E-15 T 09-03-2017 IPR002645 STAS domain RG43_RS14520 c485b5fdc684edae6436f160d3e418d7 559 ProSitePatterns PS01130 SLC26A transporters signature. 58 79 - T 09-03-2017 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 RG43_RS14520 c485b5fdc684edae6436f160d3e418d7 559 Pfam PF01740 STAS domain 453 553 4.1E-12 T 09-03-2017 IPR002645 STAS domain RG43_RS26160 99b80010039b8d4dee6d36164cf6bbe4 122 Gene3D G3DSA:3.30.450.20 27 120 1.8E-59 T 09-03-2017 RG43_RS26160 99b80010039b8d4dee6d36164cf6bbe4 122 SUPERFAMILY SSF143737 8 118 2.49E-56 T 09-03-2017 RG43_RS26160 99b80010039b8d4dee6d36164cf6bbe4 122 Pfam PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A 19 117 2.3E-52 T 09-03-2017 IPR009320 YagB/YeeU/YfjZ RG43_RS03785 99b80010039b8d4dee6d36164cf6bbe4 122 Gene3D G3DSA:3.30.450.20 27 120 1.8E-59 T 09-03-2017 RG43_RS03785 99b80010039b8d4dee6d36164cf6bbe4 122 SUPERFAMILY SSF143737 8 118 2.49E-56 T 09-03-2017 RG43_RS03785 99b80010039b8d4dee6d36164cf6bbe4 122 Pfam PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A 19 117 2.3E-52 T 09-03-2017 IPR009320 YagB/YeeU/YfjZ RG43_RS25120 0d5db136da5d226920c3a7cbe123d328 397 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 34 363 4.6E-136 T 09-03-2017 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX RG43_RS02280 394227e006d3c731767b9015c22d68cb 158 SUPERFAMILY SSF47240 1 157 1.48E-54 T 09-03-2017 IPR009078 Ferritin-like superfamily RG43_RS02280 394227e006d3c731767b9015c22d68cb 158 PIRSF PIRSF002560 1 157 6.8E-72 T 09-03-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RG43_RS02280 394227e006d3c731767b9015c22d68cb 158 PRINTS PR00601 Bacterioferritin signature 128 149 3.7E-77 T 09-03-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RG43_RS02280 394227e006d3c731767b9015c22d68cb 158 PRINTS PR00601 Bacterioferritin signature 44 64 3.7E-77 T 09-03-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RG43_RS02280 394227e006d3c731767b9015c22d68cb 158 PRINTS PR00601 Bacterioferritin signature 86 106 3.7E-77 T 09-03-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RG43_RS02280 394227e006d3c731767b9015c22d68cb 158 PRINTS PR00601 Bacterioferritin signature 3 22 3.7E-77 T 09-03-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RG43_RS02280 394227e006d3c731767b9015c22d68cb 158 PRINTS PR00601 Bacterioferritin signature 65 85 3.7E-77 T 09-03-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RG43_RS02280 394227e006d3c731767b9015c22d68cb 158 PRINTS PR00601 Bacterioferritin signature 107 127 3.7E-77 T 09-03-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RG43_RS02280 394227e006d3c731767b9015c22d68cb 158 PRINTS PR00601 Bacterioferritin signature 23 43 3.7E-77 T 09-03-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RG43_RS02280 394227e006d3c731767b9015c22d68cb 158 Pfam PF00210 Ferritin-like domain 8 144 7.8E-40 T 09-03-2017 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 RG43_RS02280 394227e006d3c731767b9015c22d68cb 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 157 1.6E-84 T 09-03-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RG43_RS02280 394227e006d3c731767b9015c22d68cb 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 09-03-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RG43_RS02280 394227e006d3c731767b9015c22d68cb 158 Gene3D G3DSA:1.20.1260.10 1 156 5.7E-67 T 09-03-2017 IPR012347 Ferritin-related RG43_RS22560 d6c1d8a9476039bff6d7a58446afa472 354 Gene3D G3DSA:3.60.15.10 1 336 2.5E-130 T 09-03-2017 IPR001279 Metallo-beta-lactamase RG43_RS22560 d6c1d8a9476039bff6d7a58446afa472 354 Hamap MF_01266 Probable L-ascorbate-6-phosphate lactonase UlaG [ulaG]. 1 354 99.426 T 09-03-2017 IPR023951 L-ascorbate-6-phosphate lactonase UlaG GO:0019854|GO:0030145|GO:0035460 RG43_RS22560 d6c1d8a9476039bff6d7a58446afa472 354 Pfam PF13483 Beta-lactamase superfamily domain 42 281 8.0E-15 T 09-03-2017 RG43_RS22560 d6c1d8a9476039bff6d7a58446afa472 354 SUPERFAMILY SSF56281 36 302 2.52E-27 T 09-03-2017 IPR001279 Metallo-beta-lactamase RG43_RS18085 b0ad0b75cd5811dd24acfaab2605681e 362 Gene3D G3DSA:3.40.50.1970 6 160 2.4E-34 T 09-03-2017 RG43_RS18085 b0ad0b75cd5811dd24acfaab2605681e 362 Pfam PF00465 Iron-containing alcohol dehydrogenase 12 348 2.8E-47 T 09-03-2017 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 RG43_RS18085 b0ad0b75cd5811dd24acfaab2605681e 362 PIRSF PIRSF000112 2 362 4.4E-132 T 09-03-2017 RG43_RS18085 b0ad0b75cd5811dd24acfaab2605681e 362 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 152 180 - T 09-03-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 RG43_RS18085 b0ad0b75cd5811dd24acfaab2605681e 362 SUPERFAMILY SSF56796 9 357 6.67E-60 T 09-03-2017 RG43_RS18085 b0ad0b75cd5811dd24acfaab2605681e 362 Gene3D G3DSA:1.20.1090.10 162 360 4.8E-52 T 09-03-2017 RG43_RS19200 494723505e3fdfb3618ea411f8cb7fa0 369 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 154 5.1E-27 T 09-03-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RG43_RS19200 494723505e3fdfb3618ea411f8cb7fa0 369 Gene3D G3DSA:3.40.50.720 191 309 2.4E-39 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS19200 494723505e3fdfb3618ea411f8cb7fa0 369 SUPERFAMILY SSF51735 161 333 9.87E-44 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS19200 494723505e3fdfb3618ea411f8cb7fa0 369 Gene3D G3DSA:3.90.180.10 2 190 1.7E-69 T 09-03-2017 IPR011032 GroES-like RG43_RS19200 494723505e3fdfb3618ea411f8cb7fa0 369 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 09-03-2017 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 RG43_RS19200 494723505e3fdfb3618ea411f8cb7fa0 369 SMART SM00829 12 367 5.3E-4 T 09-03-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RG43_RS19200 494723505e3fdfb3618ea411f8cb7fa0 369 SUPERFAMILY SSF50129 1 185 2.43E-71 T 09-03-2017 IPR011032 GroES-like RG43_RS19200 494723505e3fdfb3618ea411f8cb7fa0 369 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 369 8.7E-225 T 09-03-2017 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|Reactome: R-HSA-71384 RG43_RS19200 494723505e3fdfb3618ea411f8cb7fa0 369 SUPERFAMILY SSF50129 318 369 4.71E-12 T 09-03-2017 IPR011032 GroES-like RG43_RS19200 494723505e3fdfb3618ea411f8cb7fa0 369 Pfam PF00107 Zinc-binding dehydrogenase 197 329 8.9E-21 T 09-03-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RG43_RS19545 c98341a196236c46f9bdee8967006508 78 Pfam PF07338 Protein of unknown function (DUF1471) 30 78 2.4E-11 T 09-03-2017 IPR010854 Domain of unknown function DUF1471 RG43_RS19545 c98341a196236c46f9bdee8967006508 78 SUPERFAMILY SSF159871 4 78 3.66E-12 T 09-03-2017 IPR010854 Domain of unknown function DUF1471 RG43_RS19545 c98341a196236c46f9bdee8967006508 78 Gene3D G3DSA:3.30.1660.10 30 78 1.2E-9 T 09-03-2017 IPR025543 Dodecin-like RG43_RS04605 c0a49a8a737a0b91004c1c06fefd063e 188 Pfam PF11726 Protein of unknown function (DUF3296) 15 164 1.6E-11 T 09-03-2017 IPR021723 Inovirus Gp2 RG43_RS26995 c0a49a8a737a0b91004c1c06fefd063e 188 Pfam PF11726 Protein of unknown function (DUF3296) 15 164 1.6E-11 T 09-03-2017 IPR021723 Inovirus Gp2 RG43_RS21405 8206475d2adf633d7bc98ed29ce56b90 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 3.2E-11 T 09-03-2017 RG43_RS21405 8206475d2adf633d7bc98ed29ce56b90 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 3.2E-11 T 09-03-2017 RG43_RS21405 8206475d2adf633d7bc98ed29ce56b90 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 3.2E-11 T 09-03-2017 RG43_RS21405 8206475d2adf633d7bc98ed29ce56b90 382 SUPERFAMILY SSF52021 3 143 2.09E-57 T 09-03-2017 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 RG43_RS21405 8206475d2adf633d7bc98ed29ce56b90 382 Gene3D G3DSA:3.50.30.20 4 146 1.7E-63 T 09-03-2017 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 RG43_RS21405 8206475d2adf633d7bc98ed29ce56b90 382 SMART SM01097 3 133 2.9E-91 T 09-03-2017 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 RG43_RS21405 8206475d2adf633d7bc98ed29ce56b90 382 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.1E-5 T 09-03-2017 RG43_RS21405 8206475d2adf633d7bc98ed29ce56b90 382 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.1E-5 T 09-03-2017 RG43_RS21405 8206475d2adf633d7bc98ed29ce56b90 382 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.1E-5 T 09-03-2017 RG43_RS21405 8206475d2adf633d7bc98ed29ce56b90 382 Pfam PF00117 Glutamine amidotransferase class-I 197 372 1.5E-50 T 09-03-2017 IPR017926 Glutamine amidotransferase RG43_RS21405 8206475d2adf633d7bc98ed29ce56b90 382 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 48.843 T 09-03-2017 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 RG43_RS21405 8206475d2adf633d7bc98ed29ce56b90 382 SUPERFAMILY SSF52317 153 378 7.95E-65 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like RG43_RS21405 8206475d2adf633d7bc98ed29ce56b90 382 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 2.2E-52 T 09-03-2017 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 RG43_RS21405 8206475d2adf633d7bc98ed29ce56b90 382 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 375 2.0E-153 T 09-03-2017 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 RG43_RS21405 8206475d2adf633d7bc98ed29ce56b90 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 2.5E-40 T 09-03-2017 RG43_RS21405 8206475d2adf633d7bc98ed29ce56b90 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 2.5E-40 T 09-03-2017 RG43_RS21405 8206475d2adf633d7bc98ed29ce56b90 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 2.5E-40 T 09-03-2017 RG43_RS21405 8206475d2adf633d7bc98ed29ce56b90 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 2.5E-40 T 09-03-2017 RG43_RS21405 8206475d2adf633d7bc98ed29ce56b90 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 2.5E-40 T 09-03-2017 RG43_RS21405 8206475d2adf633d7bc98ed29ce56b90 382 Gene3D G3DSA:3.40.50.880 154 378 2.5E-86 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like RG43_RS23255 56c2b65966dc23b88adfd8defa8ea2d7 188 Gene3D G3DSA:1.10.3820.10 30 173 6.6E-16 T 09-03-2017 RG43_RS23255 56c2b65966dc23b88adfd8defa8ea2d7 188 Pfam PF13435 Cytochrome c554 and c-prime 36 83 0.0081 T 09-03-2017 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RG43_RS23255 56c2b65966dc23b88adfd8defa8ea2d7 188 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 133 171 6.2E-5 T 09-03-2017 IPR010177 Doubled CXXCH motif RG43_RS23255 56c2b65966dc23b88adfd8defa8ea2d7 188 TIGRFAM TIGR03146 cyt_nit_nrfB: cytochrome c nitrite reductase, pentaheme subunit 36 171 1.3E-59 T 09-03-2017 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit GO:0006807|GO:0020037|GO:0042597 RG43_RS23255 56c2b65966dc23b88adfd8defa8ea2d7 188 SUPERFAMILY SSF48695 5 169 4.99E-31 T 09-03-2017 IPR011031 Multihaem cytochrome RG43_RS23375 07754d7688f4f851b2564f830bc67f47 397 Gene3D G3DSA:3.40.640.10 46 316 7.9E-105 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS23375 07754d7688f4f851b2564f830bc67f47 397 Pfam PF00155 Aminotransferase class I and II 27 392 1.9E-85 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RG43_RS23375 07754d7688f4f851b2564f830bc67f47 397 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 244 257 - T 09-03-2017 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 RG43_RS23375 07754d7688f4f851b2564f830bc67f47 397 SUPERFAMILY SSF53383 2 396 1.73E-116 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS23375 07754d7688f4f851b2564f830bc67f47 397 PRINTS PR00799 Aspartate aminotransferase signature 274 299 1.0E-37 T 09-03-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RG43_RS23375 07754d7688f4f851b2564f830bc67f47 397 PRINTS PR00799 Aspartate aminotransferase signature 342 360 1.0E-37 T 09-03-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RG43_RS23375 07754d7688f4f851b2564f830bc67f47 397 PRINTS PR00799 Aspartate aminotransferase signature 176 195 1.0E-37 T 09-03-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RG43_RS23375 07754d7688f4f851b2564f830bc67f47 397 PRINTS PR00799 Aspartate aminotransferase signature 207 219 1.0E-37 T 09-03-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RG43_RS18490 387f8d4713918680be5812f660828394 305 PRINTS PR00721 Stomatin signature 171 192 2.8E-27 T 09-03-2017 IPR001972 Stomatin family GO:0016020 RG43_RS18490 387f8d4713918680be5812f660828394 305 PRINTS PR00721 Stomatin signature 73 94 2.8E-27 T 09-03-2017 IPR001972 Stomatin family GO:0016020 RG43_RS18490 387f8d4713918680be5812f660828394 305 PRINTS PR00721 Stomatin signature 108 125 2.8E-27 T 09-03-2017 IPR001972 Stomatin family GO:0016020 RG43_RS18490 387f8d4713918680be5812f660828394 305 PRINTS PR00721 Stomatin signature 128 151 2.8E-27 T 09-03-2017 IPR001972 Stomatin family GO:0016020 RG43_RS18490 387f8d4713918680be5812f660828394 305 PRINTS PR00721 Stomatin signature 152 170 2.8E-27 T 09-03-2017 IPR001972 Stomatin family GO:0016020 RG43_RS18490 387f8d4713918680be5812f660828394 305 SUPERFAMILY SSF117892 49 183 2.22E-41 T 09-03-2017 IPR001107 Band 7 domain RG43_RS18490 387f8d4713918680be5812f660828394 305 Pfam PF01145 SPFH domain / Band 7 family 22 203 3.6E-34 T 09-03-2017 IPR001107 Band 7 domain RG43_RS18490 387f8d4713918680be5812f660828394 305 SMART SM00244 18 176 2.1E-60 T 09-03-2017 IPR001107 Band 7 domain RG43_RS18490 387f8d4713918680be5812f660828394 305 Pfam PF16200 C-terminal region of band_7 238 297 3.7E-7 T 09-03-2017 IPR032435 Band 7, C-terminal extension RG43_RS18490 387f8d4713918680be5812f660828394 305 ProSitePatterns PS01270 Band 7 protein family signature. 132 160 - T 09-03-2017 IPR018080 Band 7/stomatin-like, conserved site RG43_RS20500 8d5af3b71786e6657f0d4cee98490272 217 SUPERFAMILY SSF161098 9 201 2.35E-47 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS20500 8d5af3b71786e6657f0d4cee98490272 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 216 1.2E-20 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS20500 8d5af3b71786e6657f0d4cee98490272 217 Gene3D G3DSA:1.10.3720.10 9 214 3.5E-42 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS18475 892fea1d7b221b0f4279a45f7cd4df9e 284 Pfam PF14559 Tetratricopeptide repeat 124 190 8.8E-23 T 09-03-2017 RG43_RS18475 892fea1d7b221b0f4279a45f7cd4df9e 284 Pfam PF14561 Tetratricopeptide repeat 195 284 2.3E-28 T 09-03-2017 RG43_RS18475 892fea1d7b221b0f4279a45f7cd4df9e 284 Gene3D G3DSA:1.25.40.10 197 284 2.0E-33 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS18475 892fea1d7b221b0f4279a45f7cd4df9e 284 Pfam PF00085 Thioredoxin 6 108 1.6E-18 T 09-03-2017 IPR013766 Thioredoxin domain GO:0045454 RG43_RS18475 892fea1d7b221b0f4279a45f7cd4df9e 284 Gene3D G3DSA:3.40.30.10 4 109 2.0E-28 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS18475 892fea1d7b221b0f4279a45f7cd4df9e 284 SUPERFAMILY SSF48452 118 239 4.24E-9 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS18475 892fea1d7b221b0f4279a45f7cd4df9e 284 Gene3D G3DSA:1.25.40.10 110 196 4.1E-38 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS18475 892fea1d7b221b0f4279a45f7cd4df9e 284 SUPERFAMILY SSF52833 3 112 8.69E-31 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS03670 6ffd2f1296b613212e376af9c6b9144a 43 Pfam PF13973 Domain of unknown function (DUF4222) 6 43 1.4E-14 T 09-03-2017 IPR025317 Protein of unknown function DUF4222 RG43_RS00635 d31d2d8b5b0365e46970ac3f7e0075ff 341 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 3 340 4.4E-192 T 09-03-2017 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378 RG43_RS00635 d31d2d8b5b0365e46970ac3f7e0075ff 341 Gene3D G3DSA:3.40.50.720 173 287 2.7E-35 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS00635 d31d2d8b5b0365e46970ac3f7e0075ff 341 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 09-03-2017 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 RG43_RS00635 d31d2d8b5b0365e46970ac3f7e0075ff 341 SMART SM00829 12 338 1.2E-5 T 09-03-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RG43_RS00635 d31d2d8b5b0365e46970ac3f7e0075ff 341 Pfam PF00107 Zinc-binding dehydrogenase 174 301 1.9E-27 T 09-03-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RG43_RS00635 d31d2d8b5b0365e46970ac3f7e0075ff 341 SUPERFAMILY SSF50129 1 173 2.28E-54 T 09-03-2017 IPR011032 GroES-like RG43_RS00635 d31d2d8b5b0365e46970ac3f7e0075ff 341 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 1 340 61.255 T 09-03-2017 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378 RG43_RS00635 d31d2d8b5b0365e46970ac3f7e0075ff 341 Gene3D G3DSA:3.90.180.10 1 172 1.1E-51 T 09-03-2017 IPR011032 GroES-like RG43_RS00635 d31d2d8b5b0365e46970ac3f7e0075ff 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 134 1.2E-31 T 09-03-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RG43_RS00635 d31d2d8b5b0365e46970ac3f7e0075ff 341 SUPERFAMILY SSF51735 141 305 3.54E-37 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS05000 0830139267c4ddfe1d0f35c8fffa09ec 316 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 311 8.7E-140 T 09-03-2017 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 RG43_RS05000 0830139267c4ddfe1d0f35c8fffa09ec 316 Gene3D G3DSA:3.30.470.20 192 297 2.0E-49 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RG43_RS05000 0830139267c4ddfe1d0f35c8fffa09ec 316 SUPERFAMILY SSF56059 123 312 4.86E-60 T 09-03-2017 RG43_RS05000 0830139267c4ddfe1d0f35c8fffa09ec 316 Gene3D G3DSA:3.30.1490.20 137 191 3.6E-32 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RG43_RS05000 0830139267c4ddfe1d0f35c8fffa09ec 316 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 5.4E-79 T 09-03-2017 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 RG43_RS05000 0830139267c4ddfe1d0f35c8fffa09ec 316 SUPERFAMILY SSF52440 2 122 1.38E-46 T 09-03-2017 IPR016185 Pre-ATP-grasp domain RG43_RS05000 0830139267c4ddfe1d0f35c8fffa09ec 316 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 182.352 T 09-03-2017 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 RG43_RS05000 0830139267c4ddfe1d0f35c8fffa09ec 316 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 2.3E-47 T 09-03-2017 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 RG43_RS05000 0830139267c4ddfe1d0f35c8fffa09ec 316 Gene3D G3DSA:3.40.50.20 2 129 2.3E-56 T 09-03-2017 IPR016185 Pre-ATP-grasp domain RG43_RS08185 7538c5e9db96c635b4488a198b19d824 270 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 10 252 35.91 T 09-03-2017 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 RG43_RS08185 7538c5e9db96c635b4488a198b19d824 270 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 10 247 6.8E-82 T 09-03-2017 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 RG43_RS08185 7538c5e9db96c635b4488a198b19d824 270 Gene3D G3DSA:3.30.70.580 10 113 2.5E-39 T 09-03-2017 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 RG43_RS08185 7538c5e9db96c635b4488a198b19d824 270 SUPERFAMILY SSF55120 9 265 1.34E-93 T 09-03-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RG43_RS08185 7538c5e9db96c635b4488a198b19d824 270 PIRSF PIRSF001430 9 260 4.0E-77 T 09-03-2017 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 RG43_RS08185 7538c5e9db96c635b4488a198b19d824 270 Gene3D G3DSA:3.30.70.660 115 250 5.4E-47 T 09-03-2017 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 RG43_RS08185 7538c5e9db96c635b4488a198b19d824 270 Pfam PF01416 tRNA pseudouridine synthase 151 253 1.8E-28 T 09-03-2017 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RG43_RS08185 7538c5e9db96c635b4488a198b19d824 270 Pfam PF01416 tRNA pseudouridine synthase 17 112 5.1E-10 T 09-03-2017 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RG43_RS08465 4eae0f8df4298804d031a692f6fdbef8 451 ProSitePatterns PS00455 Putative AMP-binding domain signature. 139 150 - T 09-03-2017 IPR020845 AMP-binding, conserved site RG43_RS08465 4eae0f8df4298804d031a692f6fdbef8 451 Gene3D G3DSA:3.40.50.980 148 290 6.0E-24 T 09-03-2017 RG43_RS08465 4eae0f8df4298804d031a692f6fdbef8 451 Gene3D G3DSA:2.30.38.10 291 350 1.7E-8 T 09-03-2017 RG43_RS08465 4eae0f8df4298804d031a692f6fdbef8 451 Pfam PF00501 AMP-binding enzyme 12 355 4.1E-54 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RG43_RS08465 4eae0f8df4298804d031a692f6fdbef8 451 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 30 443 2.0E-113 T 09-03-2017 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 RG43_RS08465 4eae0f8df4298804d031a692f6fdbef8 451 SUPERFAMILY SSF56801 8 449 5.49E-94 T 09-03-2017 RG43_RS08465 4eae0f8df4298804d031a692f6fdbef8 451 Gene3D G3DSA:3.30.300.30 353 447 1.6E-16 T 09-03-2017 RG43_RS08465 4eae0f8df4298804d031a692f6fdbef8 451 Pfam PF13193 AMP-binding enzyme C-terminal domain 366 422 1.0E-7 T 09-03-2017 IPR025110 AMP-binding enzyme C-terminal domain RG43_RS08465 4eae0f8df4298804d031a692f6fdbef8 451 Gene3D G3DSA:3.40.50.980 13 147 1.0E-21 T 09-03-2017 RG43_RS08465 4eae0f8df4298804d031a692f6fdbef8 451 Hamap MF_00731 2-succinylbenzoate--CoA ligase [menE]. 4 446 37.332 T 09-03-2017 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 RG43_RS20985 d758310717d6c0d0a1084528f5e2b859 284 Pfam PF17113 Regulatory signalling modulator protein AmpE 1 284 1.3E-158 T 09-03-2017 IPR031347 Protein AmpE RG43_RS19165 f874555aa8f155dfe720b222dee69d7e 320 SUPERFAMILY SSF53850 34 307 7.33E-47 T 09-03-2017 RG43_RS19165 f874555aa8f155dfe720b222dee69d7e 320 Gene3D G3DSA:3.40.190.10 215 246 4.5E-4 T 09-03-2017 RG43_RS19165 f874555aa8f155dfe720b222dee69d7e 320 Gene3D G3DSA:3.40.190.10 66 101 4.5E-4 T 09-03-2017 RG43_RS19165 f874555aa8f155dfe720b222dee69d7e 320 TIGRFAM TIGR01729 taurine_ABC_bnd: taurine ABC transporter, periplasmic binding protein 25 320 1.3E-160 T 09-03-2017 IPR010068 Periplasmic binding protein TauA GO:0015734|GO:0042597 RG43_RS19165 f874555aa8f155dfe720b222dee69d7e 320 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 24 239 1.1E-26 T 09-03-2017 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 RG43_RS19165 f874555aa8f155dfe720b222dee69d7e 320 Gene3D G3DSA:3.40.190.10 106 214 2.5E-22 T 09-03-2017 RG43_RS19165 f874555aa8f155dfe720b222dee69d7e 320 SMART SM00062 24 239 1.4E-29 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RG43_RS21410 b20066010f6faf419c435f0018d04469 273 PIRSF PIRSF000161 4 272 3.6E-92 T 09-03-2017 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RG43_RS21410 b20066010f6faf419c435f0018d04469 273 Gene3D G3DSA:3.40.50.720 5 167 1.0E-61 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS21410 b20066010f6faf419c435f0018d04469 273 SUPERFAMILY SSF51735 4 130 2.65E-52 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS21410 b20066010f6faf419c435f0018d04469 273 SUPERFAMILY SSF51735 240 272 2.65E-52 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS21410 b20066010f6faf419c435f0018d04469 273 SUPERFAMILY SSF55347 131 240 1.44E-37 T 09-03-2017 RG43_RS21410 b20066010f6faf419c435f0018d04469 273 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 6 129 4.3E-41 T 09-03-2017 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RG43_RS21410 b20066010f6faf419c435f0018d04469 273 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 6 269 35.14 T 09-03-2017 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RG43_RS21410 b20066010f6faf419c435f0018d04469 273 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 6 269 1.1E-112 T 09-03-2017 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RG43_RS21410 b20066010f6faf419c435f0018d04469 273 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 132 268 6.8E-43 T 09-03-2017 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RG43_RS21410 b20066010f6faf419c435f0018d04469 273 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 154 171 - T 09-03-2017 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RG43_RS02505 a688ad6572ade218dcb5a2482dce09d0 136 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 93 102 8.7E-15 T 09-03-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RG43_RS02505 a688ad6572ade218dcb5a2482dce09d0 136 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 8.7E-15 T 09-03-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RG43_RS02505 a688ad6572ade218dcb5a2482dce09d0 136 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 92 8.7E-15 T 09-03-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RG43_RS02505 a688ad6572ade218dcb5a2482dce09d0 136 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 4 130 3.0E-46 T 09-03-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RG43_RS02505 a688ad6572ade218dcb5a2482dce09d0 136 SUPERFAMILY SSF81330 12 126 8.89E-37 T 09-03-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RG43_RS02505 a688ad6572ade218dcb5a2482dce09d0 136 Gene3D G3DSA:1.20.5.220 120 129 7.2E-4 T 09-03-2017 IPR029027 Single alpha-helix domain Reactome: R-HSA-611105 RG43_RS02505 a688ad6572ade218dcb5a2482dce09d0 136 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 132 2.1E-60 T 09-03-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RG43_RS02505 a688ad6572ade218dcb5a2482dce09d0 136 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 09-03-2017 IPR019823 Large-conductance mechanosensitive channel, conserved site RG43_RS02505 a688ad6572ade218dcb5a2482dce09d0 136 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 133 31.264 T 09-03-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RG43_RS17995 1ea13ddf849a56c0911898f02e10f9af 352 Gene3D G3DSA:3.40.630.30 38 116 9.3E-9 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS17995 1ea13ddf849a56c0911898f02e10f9af 352 SUPERFAMILY SSF55729 34 116 2.09E-8 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS17995 1ea13ddf849a56c0911898f02e10f9af 352 TIGRFAM TIGR00124 cit_ly_ligase: [citrate (pro-3S)-lyase] ligase 7 342 7.7E-178 T 09-03-2017 IPR005216 Citrate lyase ligase GO:0008771 RG43_RS17995 1ea13ddf849a56c0911898f02e10f9af 352 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 147 204 3.8E-11 T 09-03-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RG43_RS17995 1ea13ddf849a56c0911898f02e10f9af 352 SUPERFAMILY SSF52374 145 335 3.31E-25 T 09-03-2017 RG43_RS17995 1ea13ddf849a56c0911898f02e10f9af 352 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 113 338 2.0E-131 T 09-03-2017 RG43_RS17995 1ea13ddf849a56c0911898f02e10f9af 352 SMART SM00764 147 333 7.7E-135 T 09-03-2017 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 RG43_RS17995 1ea13ddf849a56c0911898f02e10f9af 352 Gene3D G3DSA:3.40.50.620 128 335 2.0E-38 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS17995 1ea13ddf849a56c0911898f02e10f9af 352 PIRSF PIRSF005751 1 351 2.4E-144 T 09-03-2017 IPR005216 Citrate lyase ligase GO:0008771 RG43_RS17995 1ea13ddf849a56c0911898f02e10f9af 352 Pfam PF08218 Citrate lyase ligase C-terminal domain 147 333 2.0E-84 T 09-03-2017 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 RG43_RS10740 edd49aa156f0c429e9d5bcdc2696217c 552 PIRSF PIRSF004862 1 552 7.5E-188 T 09-03-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 RG43_RS10740 edd49aa156f0c429e9d5bcdc2696217c 552 Pfam PF08345 Flagellar M-ring protein C-terminal 250 429 4.3E-53 T 09-03-2017 IPR013556 Flagellar M-ring C-terminal RG43_RS10740 edd49aa156f0c429e9d5bcdc2696217c 552 Pfam PF01514 Secretory protein of YscJ/FliF family 31 218 1.3E-74 T 09-03-2017 IPR006182 Secretory protein YscJ/FliF RG43_RS10740 edd49aa156f0c429e9d5bcdc2696217c 552 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 1 551 1.5E-236 T 09-03-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 RG43_RS10740 edd49aa156f0c429e9d5bcdc2696217c 552 PRINTS PR01009 Flagellar M-ring protein signature 263 281 9.3E-46 T 09-03-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 RG43_RS10740 edd49aa156f0c429e9d5bcdc2696217c 552 PRINTS PR01009 Flagellar M-ring protein signature 119 137 9.3E-46 T 09-03-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 RG43_RS10740 edd49aa156f0c429e9d5bcdc2696217c 552 PRINTS PR01009 Flagellar M-ring protein signature 151 165 9.3E-46 T 09-03-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 RG43_RS10740 edd49aa156f0c429e9d5bcdc2696217c 552 PRINTS PR01009 Flagellar M-ring protein signature 357 381 9.3E-46 T 09-03-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 RG43_RS10740 edd49aa156f0c429e9d5bcdc2696217c 552 PRINTS PR01009 Flagellar M-ring protein signature 194 212 9.3E-46 T 09-03-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 RG43_RS12770 d2efce572ec29961ec7f3caa3cd03e05 113 ProDom PD073251 YNFB PERIPLASMIC SECRETED ORF9 PRECURSOR SIGNAL SIMILAR ECS2289 EXPORTED ESCHERICHIA 1 113 6.0E-52 T 09-03-2017 IPR009700 Protein of unknown function DUF1283 RG43_RS12770 d2efce572ec29961ec7f3caa3cd03e05 113 Pfam PF06932 Protein of unknown function (DUF1283) 32 113 2.2E-41 T 09-03-2017 IPR009700 Protein of unknown function DUF1283 RG43_RS12770 d2efce572ec29961ec7f3caa3cd03e05 113 Hamap MF_01581 UPF0482 protein YnfB [ynfB]. 2 113 28.543 T 09-03-2017 IPR009700 Protein of unknown function DUF1283 RG43_RS18050 87d7811f474e65999b906214711e49ff 531 Gene3D G3DSA:3.50.50.60 223 328 2.7E-21 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS18050 87d7811f474e65999b906214711e49ff 531 SUPERFAMILY SSF51905 217 524 4.62E-50 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS18050 87d7811f474e65999b906214711e49ff 531 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 223 513 4.2E-44 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS18050 87d7811f474e65999b906214711e49ff 531 Gene3D G3DSA:3.40.30.10 115 207 4.6E-35 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS18050 87d7811f474e65999b906214711e49ff 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 415 431 1.5E-66 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RG43_RS18050 87d7811f474e65999b906214711e49ff 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 256 271 1.5E-66 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RG43_RS18050 87d7811f474e65999b906214711e49ff 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 454 475 1.5E-66 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RG43_RS18050 87d7811f474e65999b906214711e49ff 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 363 387 1.5E-66 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RG43_RS18050 87d7811f474e65999b906214711e49ff 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 326 334 1.5E-66 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RG43_RS18050 87d7811f474e65999b906214711e49ff 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 224 246 1.5E-66 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RG43_RS18050 87d7811f474e65999b906214711e49ff 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 286 1.5E-66 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RG43_RS18050 87d7811f474e65999b906214711e49ff 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 488 506 1.5E-66 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RG43_RS18050 87d7811f474e65999b906214711e49ff 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 348 360 1.5E-66 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RG43_RS18050 87d7811f474e65999b906214711e49ff 531 Gene3D G3DSA:3.40.30.10 11 104 1.3E-33 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS18050 87d7811f474e65999b906214711e49ff 531 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 355 375 - T 09-03-2017 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 RG43_RS18050 87d7811f474e65999b906214711e49ff 531 Gene3D G3DSA:3.50.50.60 329 520 4.3E-40 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS18050 87d7811f474e65999b906214711e49ff 531 PIRSF PIRSF000238 11 531 5.2E-263 T 09-03-2017 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 RG43_RS18050 87d7811f474e65999b906214711e49ff 531 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 11 527 2.2E-240 T 09-03-2017 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 RG43_RS18050 87d7811f474e65999b906214711e49ff 531 SUPERFAMILY SSF52833 116 207 4.4E-24 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS18050 87d7811f474e65999b906214711e49ff 531 Pfam PF13192 Thioredoxin domain 136 205 3.1E-8 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS18050 87d7811f474e65999b906214711e49ff 531 SUPERFAMILY SSF52833 11 111 2.68E-29 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS18050 87d7811f474e65999b906214711e49ff 531 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 452 468 3.2E-38 T 09-03-2017 RG43_RS18050 87d7811f474e65999b906214711e49ff 531 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 225 244 3.2E-38 T 09-03-2017 RG43_RS18050 87d7811f474e65999b906214711e49ff 531 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 325 343 3.2E-38 T 09-03-2017 RG43_RS18050 87d7811f474e65999b906214711e49ff 531 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 367 385 3.2E-38 T 09-03-2017 RG43_RS18050 87d7811f474e65999b906214711e49ff 531 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 478 500 3.2E-38 T 09-03-2017 RG43_RS14605 9eda5ba6bd8764828bd72d873db82039 656 Gene3D G3DSA:2.40.170.20 143 656 1.1E-62 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RG43_RS14605 9eda5ba6bd8764828bd72d873db82039 656 SUPERFAMILY SSF56935 37 656 5.8E-87 T 09-03-2017 RG43_RS14605 9eda5ba6bd8764828bd72d873db82039 656 Pfam PF07715 TonB-dependent Receptor Plug Domain 38 139 1.3E-19 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RG43_RS14605 9eda5ba6bd8764828bd72d873db82039 656 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 639 656 - T 09-03-2017 IPR010917 TonB-dependent receptor, conserved site RG43_RS14605 9eda5ba6bd8764828bd72d873db82039 656 Gene3D G3DSA:2.170.130.10 38 142 1.9E-27 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RG43_RS14605 9eda5ba6bd8764828bd72d873db82039 656 Pfam PF00593 TonB dependent receptor 425 655 4.0E-25 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RG43_RS17385 5cf06ce62b9e2618a775454fd37dbb54 933 SMART SM00861 591 784 1.6E-65 T 09-03-2017 IPR005475 Transketolase-like, pyrimidine-binding domain RG43_RS17385 5cf06ce62b9e2618a775454fd37dbb54 933 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 50 2.0E-15 T 09-03-2017 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RG43_RS17385 5cf06ce62b9e2618a775454fd37dbb54 933 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 788 930 3.0E-54 T 09-03-2017 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RG43_RS17385 5cf06ce62b9e2618a775454fd37dbb54 933 SUPERFAMILY SSF52518 575 791 4.04E-52 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS17385 5cf06ce62b9e2618a775454fd37dbb54 933 SUPERFAMILY SSF52518 121 546 8.1E-89 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS17385 5cf06ce62b9e2618a775454fd37dbb54 933 PIRSF PIRSF000157 1 932 0.0 T 09-03-2017 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RG43_RS17385 5cf06ce62b9e2618a775454fd37dbb54 933 Gene3D G3DSA:3.40.50.970 592 787 3.1E-26 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS17385 5cf06ce62b9e2618a775454fd37dbb54 933 Gene3D G3DSA:3.40.50.970 162 550 6.3E-79 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS17385 5cf06ce62b9e2618a775454fd37dbb54 933 Pfam PF00676 Dehydrogenase E1 component 218 511 1.1E-48 T 09-03-2017 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 RG43_RS17385 5cf06ce62b9e2618a775454fd37dbb54 933 Pfam PF02779 Transketolase, pyrimidine binding domain 591 785 4.6E-67 T 09-03-2017 IPR005475 Transketolase-like, pyrimidine-binding domain RG43_RS17385 5cf06ce62b9e2618a775454fd37dbb54 933 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 14 930 0.0 T 09-03-2017 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RG43_RS23900 4a18fe7c691fd8116f967c88d2d181cf 234 Pfam PF00440 Bacterial regulatory proteins, tetR family 41 77 3.9E-8 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RG43_RS23900 4a18fe7c691fd8116f967c88d2d181cf 234 Gene3D G3DSA:1.10.357.10 21 212 3.3E-35 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RG43_RS23900 4a18fe7c691fd8116f967c88d2d181cf 234 SUPERFAMILY SSF46689 20 96 7.56E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS23900 4a18fe7c691fd8116f967c88d2d181cf 234 Hamap MF_01190 HTH-type transcriptional repressor FabR [fabR]. 20 229 55.323 T 09-03-2017 IPR023764 Transcriptional repressor HTH, FabR RG43_RS05910 2728c305864ab1375fc1d77ac667d8e5 446 Pfam PF13378 Enolase C-terminal domain-like 189 405 6.6E-37 T 09-03-2017 IPR029065 Enolase C-terminal domain-like RG43_RS05910 2728c305864ab1375fc1d77ac667d8e5 446 TIGRFAM TIGR03247 glucar-dehydr: glucarate dehydratase 6 446 1.2E-271 T 09-03-2017 IPR017653 Glucarate dehydratase GO:0000287|GO:0008872|GO:0019394 KEGG: 00053+4.2.1.40|MetaCyc: PWY-6499 RG43_RS05910 2728c305864ab1375fc1d77ac667d8e5 446 Gene3D G3DSA:3.20.20.120 119 398 4.5E-101 T 09-03-2017 IPR029065 Enolase C-terminal domain-like RG43_RS05910 2728c305864ab1375fc1d77ac667d8e5 446 SUPERFAMILY SSF51604 139 415 2.3E-81 T 09-03-2017 IPR029065 Enolase C-terminal domain-like RG43_RS05910 2728c305864ab1375fc1d77ac667d8e5 446 SUPERFAMILY SSF54826 8 137 6.89E-30 T 09-03-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RG43_RS05910 2728c305864ab1375fc1d77ac667d8e5 446 Gene3D G3DSA:3.30.390.10 11 118 7.7E-8 T 09-03-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RG43_RS05910 2728c305864ab1375fc1d77ac667d8e5 446 SMART SM00922 185 285 7.6E-16 T 09-03-2017 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RG43_RS00120 29e5a3b611b13a57961d86c92192eefc 383 Pfam PF13936 Helix-turn-helix domain 58 98 5.0E-18 T 09-03-2017 IPR025246 Transposase IS30-like HTH domain RG43_RS00120 29e5a3b611b13a57961d86c92192eefc 383 SUPERFAMILY SSF53098 229 375 9.67E-26 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS00120 29e5a3b611b13a57961d86c92192eefc 383 ProSitePatterns PS01043 Transposases, IS30 family, signature. 323 339 - T 09-03-2017 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 RG43_RS00120 29e5a3b611b13a57961d86c92192eefc 383 Gene3D G3DSA:3.30.420.10 231 375 6.2E-12 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS00120 29e5a3b611b13a57961d86c92192eefc 383 Pfam PF00665 Integrase core domain 230 336 2.3E-14 T 09-03-2017 IPR001584 Integrase, catalytic core GO:0015074 RG43_RS02665 e9ff87b2f6cbc07850e519f60813e1f6 98 PIRSF PIRSF002097 1 98 4.0E-46 T 09-03-2017 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 RG43_RS02665 e9ff87b2f6cbc07850e519f60813e1f6 98 Gene3D G3DSA:1.10.10.60 27 98 1.7E-28 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS02665 e9ff87b2f6cbc07850e519f60813e1f6 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 33.769 T 09-03-2017 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 RG43_RS02665 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 8.3E-13 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RG43_RS02665 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 8.3E-13 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RG43_RS02665 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 7.6E-35 T 09-03-2017 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 RG43_RS02665 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 7.6E-35 T 09-03-2017 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 RG43_RS02665 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 7.6E-35 T 09-03-2017 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 RG43_RS02665 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 7.6E-35 T 09-03-2017 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 RG43_RS02665 e9ff87b2f6cbc07850e519f60813e1f6 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 3.7E-14 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RG43_RS02665 e9ff87b2f6cbc07850e519f60813e1f6 98 SUPERFAMILY SSF46689 4 98 3.88E-27 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS06840 fae5b2627b6b03911eb5258c78d2b98f 245 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 119 125 - T 09-03-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RG43_RS06840 fae5b2627b6b03911eb5258c78d2b98f 245 SUPERFAMILY SSF53335 15 170 3.35E-27 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS06840 fae5b2627b6b03911eb5258c78d2b98f 245 Pfam PF05175 Methyltransferase small domain 46 130 1.3E-12 T 09-03-2017 IPR007848 Methyltransferase small domain GO:0008168 RG43_RS06840 fae5b2627b6b03911eb5258c78d2b98f 245 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 11 245 56.383 T 09-03-2017 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 KEGG: 00340+2.1.1.22 RG43_RS06840 fae5b2627b6b03911eb5258c78d2b98f 245 Gene3D G3DSA:3.40.50.150 32 238 5.0E-38 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS19275 5a31337e67c8d2b92c03d16f5c108874 1024 Gene3D G3DSA:2.60.120.260 7 208 4.6E-87 T 09-03-2017 IPR008979 Galactose-binding domain-like RG43_RS19275 5a31337e67c8d2b92c03d16f5c108874 1024 SMART SM01038 749 1022 6.3E-114 T 09-03-2017 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 RG43_RS19275 5a31337e67c8d2b92c03d16f5c108874 1024 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 386 411 - T 09-03-2017 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 RG43_RS19275 5a31337e67c8d2b92c03d16f5c108874 1024 Gene3D G3DSA:2.60.40.320 209 334 3.6E-33 T 09-03-2017 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 RG43_RS19275 5a31337e67c8d2b92c03d16f5c108874 1024 Gene3D G3DSA:2.60.40.320 626 728 2.7E-36 T 09-03-2017 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 RG43_RS19275 5a31337e67c8d2b92c03d16f5c108874 1024 SUPERFAMILY SSF51445 335 625 3.19E-104 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily RG43_RS19275 5a31337e67c8d2b92c03d16f5c108874 1024 Pfam PF02929 Beta galactosidase small chain 754 1020 2.5E-59 T 09-03-2017 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 RG43_RS19275 5a31337e67c8d2b92c03d16f5c108874 1024 Gene3D G3DSA:3.20.20.80 336 624 1.6E-116 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RG43_RS19275 5a31337e67c8d2b92c03d16f5c108874 1024 SUPERFAMILY SSF74650 734 1022 7.53E-95 T 09-03-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 RG43_RS19275 5a31337e67c8d2b92c03d16f5c108874 1024 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 448 462 - T 09-03-2017 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 RG43_RS19275 5a31337e67c8d2b92c03d16f5c108874 1024 Gene3D G3DSA:2.70.98.10 736 1021 2.3E-88 T 09-03-2017 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 RG43_RS19275 5a31337e67c8d2b92c03d16f5c108874 1024 PRINTS PR00132 Glycosyl hydrolase family 2 signature 376 394 8.9E-39 T 09-03-2017 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 RG43_RS19275 5a31337e67c8d2b92c03d16f5c108874 1024 PRINTS PR00132 Glycosyl hydrolase family 2 signature 448 463 8.9E-39 T 09-03-2017 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 RG43_RS19275 5a31337e67c8d2b92c03d16f5c108874 1024 PRINTS PR00132 Glycosyl hydrolase family 2 signature 532 547 8.9E-39 T 09-03-2017 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 RG43_RS19275 5a31337e67c8d2b92c03d16f5c108874 1024 PRINTS PR00132 Glycosyl hydrolase family 2 signature 147 162 8.9E-39 T 09-03-2017 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 RG43_RS19275 5a31337e67c8d2b92c03d16f5c108874 1024 PRINTS PR00132 Glycosyl hydrolase family 2 signature 345 359 8.9E-39 T 09-03-2017 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 RG43_RS19275 5a31337e67c8d2b92c03d16f5c108874 1024 SUPERFAMILY SSF49785 15 219 2.98E-69 T 09-03-2017 IPR008979 Galactose-binding domain-like RG43_RS19275 5a31337e67c8d2b92c03d16f5c108874 1024 Hamap MF_01687 Beta-galactosidase [lacZ]. 6 1024 17.623 T 09-03-2017 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase GO:0016798 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 RG43_RS19275 5a31337e67c8d2b92c03d16f5c108874 1024 SUPERFAMILY SSF49303 221 334 2.76E-27 T 09-03-2017 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 RG43_RS19275 5a31337e67c8d2b92c03d16f5c108874 1024 SUPERFAMILY SSF49303 622 727 5.4E-33 T 09-03-2017 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 RG43_RS19275 5a31337e67c8d2b92c03d16f5c108874 1024 Pfam PF00703 Glycosyl hydrolases family 2 222 334 6.0E-14 T 09-03-2017 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 RG43_RS19275 5a31337e67c8d2b92c03d16f5c108874 1024 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 336 629 2.6E-124 T 09-03-2017 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 RG43_RS19275 5a31337e67c8d2b92c03d16f5c108874 1024 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 52 219 1.3E-74 T 09-03-2017 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 RG43_RS19275 5a31337e67c8d2b92c03d16f5c108874 1024 Pfam PF16353 Domain of unknown function(DUF4981) 637 723 4.9E-19 T 09-03-2017 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 RG43_RS01760 786e6b2433f36d1d167bc8bec758897a 226 Gene3D G3DSA:2.60.40.1070 145 221 7.0E-23 T 09-03-2017 IPR016148 Pili assembly chaperone, C-terminal RG43_RS01760 786e6b2433f36d1d167bc8bec758897a 226 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 96 113 - T 09-03-2017 IPR018046 Pili assembly chaperone, conserved site RG43_RS01760 786e6b2433f36d1d167bc8bec758897a 226 PRINTS PR00969 Pili chaperone signature 22 31 1.5E-33 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS01760 786e6b2433f36d1d167bc8bec758897a 226 PRINTS PR00969 Pili chaperone signature 158 173 1.5E-33 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS01760 786e6b2433f36d1d167bc8bec758897a 226 PRINTS PR00969 Pili chaperone signature 123 138 1.5E-33 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS01760 786e6b2433f36d1d167bc8bec758897a 226 PRINTS PR00969 Pili chaperone signature 68 89 1.5E-33 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS01760 786e6b2433f36d1d167bc8bec758897a 226 PRINTS PR00969 Pili chaperone signature 97 114 1.5E-33 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS01760 786e6b2433f36d1d167bc8bec758897a 226 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 163 218 9.4E-13 T 09-03-2017 IPR016148 Pili assembly chaperone, C-terminal RG43_RS01760 786e6b2433f36d1d167bc8bec758897a 226 SUPERFAMILY SSF49354 21 141 2.62E-39 T 09-03-2017 IPR008962 PapD-like RG43_RS01760 786e6b2433f36d1d167bc8bec758897a 226 Gene3D G3DSA:2.60.40.360 24 139 2.7E-44 T 09-03-2017 IPR008962 PapD-like RG43_RS01760 786e6b2433f36d1d167bc8bec758897a 226 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 22 141 6.1E-41 T 09-03-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 RG43_RS01760 786e6b2433f36d1d167bc8bec758897a 226 SUPERFAMILY SSF49584 135 220 2.62E-20 T 09-03-2017 IPR016148 Pili assembly chaperone, C-terminal RG43_RS07450 fe506aea138ef6a4ad7fb74ea420b651 316 SUPERFAMILY SSF51569 1 315 1.88E-114 T 09-03-2017 RG43_RS07450 fe506aea138ef6a4ad7fb74ea420b651 316 Pfam PF00923 Transaldolase 13 310 1.0E-101 T 09-03-2017 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 RG43_RS07450 fe506aea138ef6a4ad7fb74ea420b651 316 ProSitePatterns PS00958 Transaldolase active site. 128 145 - T 09-03-2017 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 RG43_RS07450 fe506aea138ef6a4ad7fb74ea420b651 316 Gene3D G3DSA:3.20.20.70 1 315 2.0E-133 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS07450 fe506aea138ef6a4ad7fb74ea420b651 316 ProSitePatterns PS01054 Transaldolase signature 1. 30 38 - T 09-03-2017 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 RG43_RS07450 fe506aea138ef6a4ad7fb74ea420b651 316 TIGRFAM TIGR00874 talAB: transaldolase 2 316 9.5E-166 T 09-03-2017 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 RG43_RS07450 fe506aea138ef6a4ad7fb74ea420b651 316 Hamap MF_00492 Transaldolase [tal]. 1 316 53.135 T 09-03-2017 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 RG43_RS25245 4bc15b8a4f155d34a2c724723e32e63e 421 Gene3D G3DSA:3.40.50.300 232 386 1.3E-47 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25245 4bc15b8a4f155d34a2c724723e32e63e 421 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.89 T 09-03-2017 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 RG43_RS25245 4bc15b8a4f155d34a2c724723e32e63e 421 SMART SM00490 270 351 8.2E-31 T 09-03-2017 IPR001650 Helicase, C-terminal RG43_RS25245 4bc15b8a4f155d34a2c724723e32e63e 421 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 09-03-2017 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site RG43_RS25245 4bc15b8a4f155d34a2c724723e32e63e 421 SMART SM00487 28 234 1.8E-52 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain RG43_RS25245 4bc15b8a4f155d34a2c724723e32e63e 421 SUPERFAMILY SSF52540 84 363 4.84E-69 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25245 4bc15b8a4f155d34a2c724723e32e63e 421 Pfam PF00271 Helicase conserved C-terminal domain 243 351 3.1E-28 T 09-03-2017 IPR001650 Helicase, C-terminal RG43_RS25245 4bc15b8a4f155d34a2c724723e32e63e 421 Pfam PF00270 DEAD/DEAH box helicase 33 206 2.1E-44 T 09-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RG43_RS25245 4bc15b8a4f155d34a2c724723e32e63e 421 Gene3D G3DSA:3.40.50.300 8 231 3.0E-70 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS19060 35629e2fbd76b27ac71366f4d32bce1b 174 Pfam PF01202 Shikimate kinase 11 168 5.1E-48 T 09-03-2017 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 RG43_RS19060 35629e2fbd76b27ac71366f4d32bce1b 174 SUPERFAMILY SSF52540 4 170 1.46E-27 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS19060 35629e2fbd76b27ac71366f4d32bce1b 174 PRINTS PR01100 Shikimate kinase family signature 29 42 1.4E-25 T 09-03-2017 RG43_RS19060 35629e2fbd76b27ac71366f4d32bce1b 174 PRINTS PR01100 Shikimate kinase family signature 57 65 1.4E-25 T 09-03-2017 RG43_RS19060 35629e2fbd76b27ac71366f4d32bce1b 174 PRINTS PR01100 Shikimate kinase family signature 95 112 1.4E-25 T 09-03-2017 RG43_RS19060 35629e2fbd76b27ac71366f4d32bce1b 174 PRINTS PR01100 Shikimate kinase family signature 5 20 1.4E-25 T 09-03-2017 RG43_RS19060 35629e2fbd76b27ac71366f4d32bce1b 174 PRINTS PR01100 Shikimate kinase family signature 74 83 1.4E-25 T 09-03-2017 RG43_RS19060 35629e2fbd76b27ac71366f4d32bce1b 174 Gene3D G3DSA:3.40.50.300 3 169 3.8E-49 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS19060 35629e2fbd76b27ac71366f4d32bce1b 174 ProSitePatterns PS01128 Shikimate kinase signature. 58 82 - T 09-03-2017 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 RG43_RS19060 35629e2fbd76b27ac71366f4d32bce1b 174 Hamap MF_01269 Shikimate kinase 2 [aroL]. 1 173 43.126 T 09-03-2017 IPR027544 Shikimate kinase 2 GO:0004765|GO:0009073 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 RG43_RS19060 35629e2fbd76b27ac71366f4d32bce1b 174 Hamap MF_00109 Shikimate kinase [aroK]. 2 169 24.12 T 09-03-2017 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 RG43_RS05865 2d725a0fa03e1eedaa3cfdde9da33059 454 Gene3D G3DSA:3.30.1850.10 2 113 7.5E-54 T 09-03-2017 IPR027820 Domain of unknown function DUF4478 RG43_RS05865 2d725a0fa03e1eedaa3cfdde9da33059 454 Pfam PF03641 Possible lysine decarboxylase 190 329 1.5E-33 T 09-03-2017 IPR031100 LOG family RG43_RS05865 2d725a0fa03e1eedaa3cfdde9da33059 454 Pfam PF11892 Domain of unknown function (DUF3412) 333 452 1.6E-54 T 09-03-2017 IPR021826 Protein of unknown function DUF3412 RG43_RS05865 2d725a0fa03e1eedaa3cfdde9da33059 454 Gene3D G3DSA:3.40.50.450 125 452 1.6E-123 T 09-03-2017 RG43_RS05865 2d725a0fa03e1eedaa3cfdde9da33059 454 Pfam PF14793 Domain of unknown function (DUF4478) 4 109 4.5E-46 T 09-03-2017 IPR027820 Domain of unknown function DUF4478 RG43_RS05865 2d725a0fa03e1eedaa3cfdde9da33059 454 SUPERFAMILY SSF102405 118 330 6.56E-42 T 09-03-2017 RG43_RS21830 919ce70ed8f068217084aadc27dbcde3 554 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 515 1.3E-68 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RG43_RS21830 919ce70ed8f068217084aadc27dbcde3 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 191 211 2.5E-92 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RG43_RS21830 919ce70ed8f068217084aadc27dbcde3 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 2.5E-92 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RG43_RS21830 919ce70ed8f068217084aadc27dbcde3 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 2.5E-92 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RG43_RS21830 919ce70ed8f068217084aadc27dbcde3 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 2.5E-92 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RG43_RS21830 919ce70ed8f068217084aadc27dbcde3 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 2.5E-92 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RG43_RS21830 919ce70ed8f068217084aadc27dbcde3 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 2.5E-92 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RG43_RS21830 919ce70ed8f068217084aadc27dbcde3 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 2.5E-92 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RG43_RS21830 919ce70ed8f068217084aadc27dbcde3 554 SMART SM00319 44 182 4.1E-70 T 09-03-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 RG43_RS21830 919ce70ed8f068217084aadc27dbcde3 554 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 294 316 - T 09-03-2017 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site RG43_RS21830 919ce70ed8f068217084aadc27dbcde3 554 Pfam PF02203 Tar ligand binding domain homologue 1 176 5.0E-58 T 09-03-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 RG43_RS21830 919ce70ed8f068217084aadc27dbcde3 554 SUPERFAMILY SSF47170 25 181 2.62E-52 T 09-03-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 RG43_RS21830 919ce70ed8f068217084aadc27dbcde3 554 SUPERFAMILY SSF58104 236 521 7.98E-76 T 09-03-2017 RG43_RS21830 919ce70ed8f068217084aadc27dbcde3 554 Gene3D G3DSA:1.20.120.30 35 181 1.3E-62 T 09-03-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 RG43_RS21830 919ce70ed8f068217084aadc27dbcde3 554 Pfam PF00672 HAMP domain 196 263 1.9E-14 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RG43_RS21830 919ce70ed8f068217084aadc27dbcde3 554 SMART SM00283 269 516 4.9E-96 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RG43_RS21830 919ce70ed8f068217084aadc27dbcde3 554 SMART SM00304 216 268 6.7E-13 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RG43_RS21830 919ce70ed8f068217084aadc27dbcde3 554 Gene3D G3DSA:1.10.287.950 284 488 2.1E-63 T 09-03-2017 RG43_RS13015 c5fb59c57487d5ff716bee817954ae38 249 Pfam PF13954 PapC N-terminal domain 43 195 1.3E-46 T 09-03-2017 IPR025885 PapC, N-terminal domain GO:0005515 RG43_RS13015 c5fb59c57487d5ff716bee817954ae38 249 SUPERFAMILY SSF141729 41 171 3.4E-34 T 09-03-2017 RG43_RS13015 c5fb59c57487d5ff716bee817954ae38 249 Pfam PF00577 Outer membrane usher protein 213 246 1.3E-4 T 09-03-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 RG43_RS18105 ada84e7bd7cf24b3e166320f52bbdd30 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 245 7.8E-53 T 09-03-2017 RG43_RS18105 ada84e7bd7cf24b3e166320f52bbdd30 248 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 94 114 1.8E-67 T 09-03-2017 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 RG43_RS18105 ada84e7bd7cf24b3e166320f52bbdd30 248 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 159 182 1.8E-67 T 09-03-2017 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 RG43_RS18105 ada84e7bd7cf24b3e166320f52bbdd30 248 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 12 29 1.8E-67 T 09-03-2017 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 RG43_RS18105 ada84e7bd7cf24b3e166320f52bbdd30 248 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 198 217 1.8E-67 T 09-03-2017 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 RG43_RS18105 ada84e7bd7cf24b3e166320f52bbdd30 248 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 224 243 1.8E-67 T 09-03-2017 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 RG43_RS18105 ada84e7bd7cf24b3e166320f52bbdd30 248 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 74 91 1.8E-67 T 09-03-2017 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 RG43_RS18105 ada84e7bd7cf24b3e166320f52bbdd30 248 TIGRFAM TIGR04316 dhbA_paeA: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 8 247 9.5E-109 T 09-03-2017 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 RG43_RS18105 ada84e7bd7cf24b3e166320f52bbdd30 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 177 5.9E-4 T 09-03-2017 RG43_RS18105 ada84e7bd7cf24b3e166320f52bbdd30 248 SUPERFAMILY SSF51735 1 246 3.08E-67 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS18105 ada84e7bd7cf24b3e166320f52bbdd30 248 Gene3D G3DSA:3.40.50.720 2 246 4.2E-70 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS18105 ada84e7bd7cf24b3e166320f52bbdd30 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 131 159 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RG43_RS18105 ada84e7bd7cf24b3e166320f52bbdd30 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 71 82 3.8E-8 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS18105 ada84e7bd7cf24b3e166320f52bbdd30 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 163 3.8E-8 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS18105 ada84e7bd7cf24b3e166320f52bbdd30 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 124 132 3.8E-8 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS26375 b18f416701102b3c46e36034fc406489 209 SUPERFAMILY SSF55811 6 208 1.14E-50 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 RG43_RS26375 b18f416701102b3c46e36034fc406489 209 Gene3D G3DSA:3.90.79.10 11 208 1.1E-56 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 RG43_RS26375 b18f416701102b3c46e36034fc406489 209 ProSitePatterns PS00893 Nudix box signature. 97 118 - T 09-03-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RG43_RS26375 b18f416701102b3c46e36034fc406489 209 Pfam PF00293 NUDIX domain 59 179 1.4E-11 T 09-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 RG43_RS26375 b18f416701102b3c46e36034fc406489 209 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 14 199 2.6E-85 T 09-03-2017 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 RG43_RS04000 b18f416701102b3c46e36034fc406489 209 SUPERFAMILY SSF55811 6 208 1.14E-50 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 RG43_RS04000 b18f416701102b3c46e36034fc406489 209 Gene3D G3DSA:3.90.79.10 11 208 1.1E-56 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 RG43_RS04000 b18f416701102b3c46e36034fc406489 209 ProSitePatterns PS00893 Nudix box signature. 97 118 - T 09-03-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RG43_RS04000 b18f416701102b3c46e36034fc406489 209 Pfam PF00293 NUDIX domain 59 179 1.4E-11 T 09-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 RG43_RS04000 b18f416701102b3c46e36034fc406489 209 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 14 199 2.6E-85 T 09-03-2017 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 RG43_RS07240 e5b6ddfd845f7bdade58051eb7209f12 2683 Pfam PF05689 Salmonella repeat of unknown function (DUF823) 1373 1558 1.5E-48 T 09-03-2017 IPR008541 Protein of unknown function DUF823 RG43_RS07240 e5b6ddfd845f7bdade58051eb7209f12 2683 Pfam PF05689 Salmonella repeat of unknown function (DUF823) 1943 2123 1.3E-48 T 09-03-2017 IPR008541 Protein of unknown function DUF823 RG43_RS07240 e5b6ddfd845f7bdade58051eb7209f12 2683 Pfam PF05689 Salmonella repeat of unknown function (DUF823) 2506 2657 2.0E-35 T 09-03-2017 IPR008541 Protein of unknown function DUF823 RG43_RS07240 e5b6ddfd845f7bdade58051eb7209f12 2683 Pfam PF05689 Salmonella repeat of unknown function (DUF823) 2228 2399 5.9E-49 T 09-03-2017 IPR008541 Protein of unknown function DUF823 RG43_RS07240 e5b6ddfd845f7bdade58051eb7209f12 2683 Pfam PF05689 Salmonella repeat of unknown function (DUF823) 1657 1839 9.6E-46 T 09-03-2017 IPR008541 Protein of unknown function DUF823 RG43_RS07240 e5b6ddfd845f7bdade58051eb7209f12 2683 Pfam PF05689 Salmonella repeat of unknown function (DUF823) 539 712 7.3E-50 T 09-03-2017 IPR008541 Protein of unknown function DUF823 RG43_RS07240 e5b6ddfd845f7bdade58051eb7209f12 2683 Pfam PF05689 Salmonella repeat of unknown function (DUF823) 1090 1274 1.5E-56 T 09-03-2017 IPR008541 Protein of unknown function DUF823 RG43_RS07240 e5b6ddfd845f7bdade58051eb7209f12 2683 Pfam PF05689 Salmonella repeat of unknown function (DUF823) 806 987 2.1E-50 T 09-03-2017 IPR008541 Protein of unknown function DUF823 RG43_RS07240 e5b6ddfd845f7bdade58051eb7209f12 2683 Pfam PF05689 Salmonella repeat of unknown function (DUF823) 272 444 3.3E-47 T 09-03-2017 IPR008541 Protein of unknown function DUF823 RG43_RS07240 e5b6ddfd845f7bdade58051eb7209f12 2683 Pfam PF05688 Salmonella repeat of unknown function (DUF824) 1296 1341 1.9E-14 T 09-03-2017 IPR008542 Protein of unknown function DUF824 RG43_RS07240 e5b6ddfd845f7bdade58051eb7209f12 2683 Pfam PF05688 Salmonella repeat of unknown function (DUF824) 463 510 3.6E-9 T 09-03-2017 IPR008542 Protein of unknown function DUF824 RG43_RS07240 e5b6ddfd845f7bdade58051eb7209f12 2683 Pfam PF05688 Salmonella repeat of unknown function (DUF824) 1869 1908 8.1E-6 T 09-03-2017 IPR008542 Protein of unknown function DUF824 RG43_RS07240 e5b6ddfd845f7bdade58051eb7209f12 2683 Pfam PF05688 Salmonella repeat of unknown function (DUF824) 2426 2470 1.7E-16 T 09-03-2017 IPR008542 Protein of unknown function DUF824 RG43_RS07240 e5b6ddfd845f7bdade58051eb7209f12 2683 Pfam PF05688 Salmonella repeat of unknown function (DUF824) 733 775 5.1E-14 T 09-03-2017 IPR008542 Protein of unknown function DUF824 RG43_RS07240 e5b6ddfd845f7bdade58051eb7209f12 2683 Pfam PF05688 Salmonella repeat of unknown function (DUF824) 1583 1628 4.6E-12 T 09-03-2017 IPR008542 Protein of unknown function DUF824 RG43_RS07240 e5b6ddfd845f7bdade58051eb7209f12 2683 Pfam PF05688 Salmonella repeat of unknown function (DUF824) 203 248 7.0E-14 T 09-03-2017 IPR008542 Protein of unknown function DUF824 RG43_RS07240 e5b6ddfd845f7bdade58051eb7209f12 2683 Pfam PF05688 Salmonella repeat of unknown function (DUF824) 2156 2194 6.4E-8 T 09-03-2017 IPR008542 Protein of unknown function DUF824 RG43_RS07240 e5b6ddfd845f7bdade58051eb7209f12 2683 Pfam PF05688 Salmonella repeat of unknown function (DUF824) 1009 1053 4.0E-17 T 09-03-2017 IPR008542 Protein of unknown function DUF824 RG43_RS09735 27b2f1644cb64fb2acedb14154d7fa82 203 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 116 202 5.1E-17 T 09-03-2017 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 RG43_RS09735 27b2f1644cb64fb2acedb14154d7fa82 203 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 8 203 37.735 T 09-03-2017 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 RG43_RS09735 27b2f1644cb64fb2acedb14154d7fa82 203 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 115 198 1.6E-29 T 09-03-2017 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 RG43_RS09735 27b2f1644cb64fb2acedb14154d7fa82 203 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 112 198 17.658 T 09-03-2017 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 RG43_RS09735 27b2f1644cb64fb2acedb14154d7fa82 203 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 33 105 5.0E-31 T 09-03-2017 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 RG43_RS09735 27b2f1644cb64fb2acedb14154d7fa82 203 SUPERFAMILY SSF101386 115 202 7.85E-23 T 09-03-2017 RG43_RS09735 27b2f1644cb64fb2acedb14154d7fa82 203 SUPERFAMILY SSF141734 5 122 6.15E-47 T 09-03-2017 RG43_RS09735 27b2f1644cb64fb2acedb14154d7fa82 203 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 56 105 2.0E-25 T 09-03-2017 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 RG43_RS06200 49768e1a2b1dd8c6f92e4f078b40b3c6 218 Gene3D G3DSA:3.60.21.10 6 217 3.5E-40 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like RG43_RS06200 49768e1a2b1dd8c6f92e4f078b40b3c6 218 SUPERFAMILY SSF56300 6 217 6.38E-44 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like RG43_RS06200 49768e1a2b1dd8c6f92e4f078b40b3c6 218 ProSitePatterns PS00125 Serine/threonine specific protein phosphatases signature. 74 79 - T 09-03-2017 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04660+3.1.3.16 RG43_RS06200 49768e1a2b1dd8c6f92e4f078b40b3c6 218 Pfam PF00149 Calcineurin-like phosphoesterase 16 188 1.5E-15 T 09-03-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RG43_RS02940 f8eabdac91826090bfcf6a2066a5dd80 163 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 13 155 1.0E-36 T 09-03-2017 IPR002178 PTS EIIA type-2 domain RG43_RS02940 f8eabdac91826090bfcf6a2066a5dd80 163 Gene3D G3DSA:3.40.930.10 3 157 9.8E-48 T 09-03-2017 IPR002178 PTS EIIA type-2 domain RG43_RS02940 f8eabdac91826090bfcf6a2066a5dd80 163 SUPERFAMILY SSF55804 9 155 2.22E-42 T 09-03-2017 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 RG43_RS02940 f8eabdac91826090bfcf6a2066a5dd80 163 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 9 155 4.4E-63 T 09-03-2017 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 RG43_RS02940 f8eabdac91826090bfcf6a2066a5dd80 163 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 58 74 - T 09-03-2017 IPR002178 PTS EIIA type-2 domain RG43_RS10190 de9c8b46183277a7b67c6925424ed009 319 SMART SM00342 233 316 2.3E-24 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS10190 de9c8b46183277a7b67c6925424ed009 319 SUPERFAMILY SSF46689 270 318 8.96E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS10190 de9c8b46183277a7b67c6925424ed009 319 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 285 300 1.0E-6 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RG43_RS10190 de9c8b46183277a7b67c6925424ed009 319 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 300 316 1.0E-6 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RG43_RS10190 de9c8b46183277a7b67c6925424ed009 319 Pfam PF12833 Helix-turn-helix domain 239 317 1.1E-18 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS10190 de9c8b46183277a7b67c6925424ed009 319 Gene3D G3DSA:1.10.10.60 270 317 3.7E-16 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS10190 de9c8b46183277a7b67c6925424ed009 319 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 270 312 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RG43_RS16335 41503093d1ec64b9a75bc715250c7308 377 SUPERFAMILY SSF50331 252 375 6.46E-17 T 09-03-2017 IPR008995 Molybdate/tungstate binding, C-terminal RG43_RS16335 41503093d1ec64b9a75bc715250c7308 377 Gene3D G3DSA:3.40.50.300 11 254 7.9E-85 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16335 41503093d1ec64b9a75bc715250c7308 377 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 50 375 4.9E-155 T 09-03-2017 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 RG43_RS16335 41503093d1ec64b9a75bc715250c7308 377 SUPERFAMILY SSF52540 19 257 2.73E-87 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16335 41503093d1ec64b9a75bc715250c7308 377 SMART SM00382 44 227 3.6E-18 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS16335 41503093d1ec64b9a75bc715250c7308 377 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS16335 41503093d1ec64b9a75bc715250c7308 377 Pfam PF08402 TOBE domain 295 375 3.1E-19 T 09-03-2017 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 RG43_RS16335 41503093d1ec64b9a75bc715250c7308 377 Pfam PF00005 ABC transporter 36 177 8.7E-37 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS11725 36a09deff6e8d2dd584b30329ef1fdc0 496 Pfam PF00990 Diguanylate cyclase, GGDEF domain 346 494 1.7E-39 T 09-03-2017 IPR000160 GGDEF domain RG43_RS11725 36a09deff6e8d2dd584b30329ef1fdc0 496 SUPERFAMILY SSF55073 349 495 1.88E-32 T 09-03-2017 IPR029787 Nucleotide cyclase RG43_RS11725 36a09deff6e8d2dd584b30329ef1fdc0 496 Gene3D G3DSA:3.30.70.270 347 494 1.9E-34 T 09-03-2017 RG43_RS11725 36a09deff6e8d2dd584b30329ef1fdc0 496 Pfam PF17155 Gammaproteobacterial periplasmic sensor domain 31 304 6.3E-150 T 09-03-2017 IPR033420 Gammaproteobacterial periplasmic sensor domain GAPES1 RG43_RS11725 36a09deff6e8d2dd584b30329ef1fdc0 496 SMART SM00267 333 496 2.9E-46 T 09-03-2017 IPR000160 GGDEF domain RG43_RS11725 36a09deff6e8d2dd584b30329ef1fdc0 496 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 343 495 1.2E-35 T 09-03-2017 IPR000160 GGDEF domain RG43_RS11725 36a09deff6e8d2dd584b30329ef1fdc0 496 Gene3D G3DSA:3.30.450.20 192 241 2.1E-5 T 09-03-2017 RG43_RS01675 abadb37d0874dd30d676a644725b8c99 581 Pfam PF01019 Gamma-glutamyltranspeptidase 65 573 3.7E-191 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RG43_RS01675 abadb37d0874dd30d676a644725b8c99 581 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 50 572 7.8E-237 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RG43_RS01675 abadb37d0874dd30d676a644725b8c99 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 416 434 2.7E-81 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RG43_RS01675 abadb37d0874dd30d676a644725b8c99 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 145 163 2.7E-81 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RG43_RS01675 abadb37d0874dd30d676a644725b8c99 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 262 278 2.7E-81 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RG43_RS01675 abadb37d0874dd30d676a644725b8c99 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 481 498 2.7E-81 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RG43_RS01675 abadb37d0874dd30d676a644725b8c99 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 392 410 2.7E-81 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RG43_RS01675 abadb37d0874dd30d676a644725b8c99 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 457 472 2.7E-81 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RG43_RS01675 abadb37d0874dd30d676a644725b8c99 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 72 97 2.7E-81 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RG43_RS01675 abadb37d0874dd30d676a644725b8c99 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 163 182 2.7E-81 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RG43_RS01675 abadb37d0874dd30d676a644725b8c99 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 292 311 2.7E-81 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RG43_RS01675 abadb37d0874dd30d676a644725b8c99 581 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 392 416 - T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RG43_RS01675 abadb37d0874dd30d676a644725b8c99 581 SUPERFAMILY SSF56235 42 573 6.17E-197 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal RG43_RS07090 a9cd4c141efc985e65a9e74f702ccdbb 379 PIRSF PIRSF004925 1 379 3.7E-121 T 09-03-2017 IPR026032 Probable 3-phenylpropionic acid transporter RG43_RS07090 a9cd4c141efc985e65a9e74f702ccdbb 379 SUPERFAMILY SSF103473 7 371 2.09E-35 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS07090 a9cd4c141efc985e65a9e74f702ccdbb 379 Gene3D G3DSA:1.20.1250.20 8 182 3.8E-15 T 09-03-2017 RG43_RS07090 a9cd4c141efc985e65a9e74f702ccdbb 379 Gene3D G3DSA:1.20.1250.20 204 371 4.0E-20 T 09-03-2017 RG43_RS07090 a9cd4c141efc985e65a9e74f702ccdbb 379 Pfam PF12832 MFS_1 like family 8 358 1.5E-44 T 09-03-2017 IPR024989 Major facilitator superfamily associated domain RG43_RS07090 a9cd4c141efc985e65a9e74f702ccdbb 379 TIGRFAM TIGR00902 2A0127: MFS transporter, phenyl propionate permease (PPP) family 1 379 7.2E-214 T 09-03-2017 IPR026032 Probable 3-phenylpropionic acid transporter RG43_RS00370 03df75f51a786d1f6b4f207611da976e 1165 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 479 509 1.0E-9 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat RG43_RS00370 03df75f51a786d1f6b4f207611da976e 1165 Pfam PF03797 Autotransporter beta-domain 883 1150 1.7E-35 T 09-03-2017 IPR005546 Autotransporter beta-domain RG43_RS00370 03df75f51a786d1f6b4f207611da976e 1165 SMART SM00869 881 1154 5.9E-36 T 09-03-2017 IPR005546 Autotransporter beta-domain RG43_RS00370 03df75f51a786d1f6b4f207611da976e 1165 Pfam PF03212 Pertactin 729 818 6.1E-7 T 09-03-2017 IPR004899 Pertactin, central region RG43_RS00370 03df75f51a786d1f6b4f207611da976e 1165 SUPERFAMILY SSF103515 846 1165 7.32E-45 T 09-03-2017 IPR005546 Autotransporter beta-domain RG43_RS00370 03df75f51a786d1f6b4f207611da976e 1165 Gene3D G3DSA:2.40.128.130 839 1165 2.0E-68 T 09-03-2017 IPR005546 Autotransporter beta-domain RG43_RS00370 03df75f51a786d1f6b4f207611da976e 1165 SUPERFAMILY SSF51126 448 825 1.73E-43 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor RG43_RS00370 03df75f51a786d1f6b4f207611da976e 1165 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 716 1165 8.6E-97 T 09-03-2017 IPR006315 Outer membrane autotransporter barrel GO:0019867 RG43_RS00370 03df75f51a786d1f6b4f207611da976e 1165 Pfam PF12951 Passenger-associated-transport-repeat 643 669 0.013 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat RG43_RS00370 03df75f51a786d1f6b4f207611da976e 1165 Pfam PF12951 Passenger-associated-transport-repeat 480 509 1.1E-6 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat RG43_RS00370 03df75f51a786d1f6b4f207611da976e 1165 Gene3D G3DSA:2.160.20.20 590 829 2.2E-38 T 09-03-2017 IPR012332 P22 tailspike C-terminal domain-like RG43_RS16775 53a2f2e7b07155e2bad4c41f39389571 384 Gene3D G3DSA:3.90.1150.10 270 381 1.1E-36 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RG43_RS16775 53a2f2e7b07155e2bad4c41f39389571 384 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 3 384 50.691 T 09-03-2017 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 RG43_RS16775 53a2f2e7b07155e2bad4c41f39389571 384 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 20 381 2.9E-148 T 09-03-2017 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 RG43_RS16775 53a2f2e7b07155e2bad4c41f39389571 384 SUPERFAMILY SSF53383 4 380 2.42E-111 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS16775 53a2f2e7b07155e2bad4c41f39389571 384 Gene3D G3DSA:3.40.640.10 58 269 7.8E-85 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS16775 53a2f2e7b07155e2bad4c41f39389571 384 Pfam PF00155 Aminotransferase class I and II 41 380 3.6E-68 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RG43_RS16775 53a2f2e7b07155e2bad4c41f39389571 384 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 233 242 - T 09-03-2017 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 RG43_RS12045 fde9fa85e2bb35caa2b2d6f368888a0a 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 5.3E-53 T 09-03-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS12045 fde9fa85e2bb35caa2b2d6f368888a0a 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.4E-42 T 09-03-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS12045 fde9fa85e2bb35caa2b2d6f368888a0a 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.4E-42 T 09-03-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS12045 fde9fa85e2bb35caa2b2d6f368888a0a 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.4E-42 T 09-03-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS12045 fde9fa85e2bb35caa2b2d6f368888a0a 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 31.068 T 09-03-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS12045 fde9fa85e2bb35caa2b2d6f368888a0a 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 4.0E-14 T 09-03-2017 RG43_RS12045 fde9fa85e2bb35caa2b2d6f368888a0a 118 Gene3D G3DSA:1.10.1900.20 55 117 3.7E-31 T 09-03-2017 RG43_RS12045 fde9fa85e2bb35caa2b2d6f368888a0a 118 SUPERFAMILY SSF74731 3 117 2.62E-50 T 09-03-2017 RG43_RS12045 fde9fa85e2bb35caa2b2d6f368888a0a 118 Pfam PF00453 Ribosomal protein L20 3 109 3.9E-49 T 09-03-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS12045 fde9fa85e2bb35caa2b2d6f368888a0a 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 09-03-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS06565 014183318d053f1dc73e3ab607b0e901 220 SUPERFAMILY SSF46785 9 70 2.15E-11 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS06565 014183318d053f1dc73e3ab607b0e901 220 SUPERFAMILY SSF48008 72 209 2.25E-17 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal RG43_RS06565 014183318d053f1dc73e3ab607b0e901 220 SMART SM00345 8 66 2.0E-17 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS06565 014183318d053f1dc73e3ab607b0e901 220 SMART SM00895 76 208 4.7E-17 T 09-03-2017 IPR011711 GntR, C-terminal RG43_RS06565 014183318d053f1dc73e3ab607b0e901 220 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 66 2.5E-12 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS06565 014183318d053f1dc73e3ab607b0e901 220 Pfam PF07729 FCD domain 76 206 6.6E-19 T 09-03-2017 IPR011711 GntR, C-terminal RG43_RS06565 014183318d053f1dc73e3ab607b0e901 220 Gene3D G3DSA:1.10.10.10 9 67 9.0E-13 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS06565 014183318d053f1dc73e3ab607b0e901 220 Gene3D G3DSA:1.20.120.530 69 218 4.3E-24 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal RG43_RS05505 1ce5c7cf6b3abc676a3b9cb5e1150cee 420 Gene3D G3DSA:2.40.37.10 263 419 4.4E-59 T 09-03-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 RG43_RS05505 1ce5c7cf6b3abc676a3b9cb5e1150cee 420 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 51 69 - T 09-03-2017 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site RG43_RS05505 1ce5c7cf6b3abc676a3b9cb5e1150cee 420 SUPERFAMILY SSF50621 250 419 5.65E-60 T 09-03-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 RG43_RS05505 1ce5c7cf6b3abc676a3b9cb5e1150cee 420 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 6 418 3.8E-147 T 09-03-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RG43_RS05505 1ce5c7cf6b3abc676a3b9cb5e1150cee 420 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 14 419 40.204 T 09-03-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RG43_RS05505 1ce5c7cf6b3abc676a3b9cb5e1150cee 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 376 389 2.3E-20 T 09-03-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RG43_RS05505 1ce5c7cf6b3abc676a3b9cb5e1150cee 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 51 69 2.3E-20 T 09-03-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RG43_RS05505 1ce5c7cf6b3abc676a3b9cb5e1150cee 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 265 284 2.3E-20 T 09-03-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RG43_RS05505 1ce5c7cf6b3abc676a3b9cb5e1150cee 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 71 83 2.3E-20 T 09-03-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RG43_RS05505 1ce5c7cf6b3abc676a3b9cb5e1150cee 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 182 195 2.3E-20 T 09-03-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RG43_RS05505 1ce5c7cf6b3abc676a3b9cb5e1150cee 420 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 216 229 - T 09-03-2017 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site RG43_RS05505 1ce5c7cf6b3abc676a3b9cb5e1150cee 420 SUPERFAMILY SSF51419 25 277 7.41E-59 T 09-03-2017 IPR029066 PLP-binding barrel RG43_RS05505 1ce5c7cf6b3abc676a3b9cb5e1150cee 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 386 408 8.6E-28 T 09-03-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RG43_RS05505 1ce5c7cf6b3abc676a3b9cb5e1150cee 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 69 86 8.6E-28 T 09-03-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RG43_RS05505 1ce5c7cf6b3abc676a3b9cb5e1150cee 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 157 166 8.6E-28 T 09-03-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RG43_RS05505 1ce5c7cf6b3abc676a3b9cb5e1150cee 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 293 311 8.6E-28 T 09-03-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RG43_RS05505 1ce5c7cf6b3abc676a3b9cb5e1150cee 420 Gene3D G3DSA:3.20.20.10 36 262 2.7E-66 T 09-03-2017 IPR029066 PLP-binding barrel RG43_RS05505 1ce5c7cf6b3abc676a3b9cb5e1150cee 420 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 280 395 7.4E-17 T 09-03-2017 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 RG43_RS05505 1ce5c7cf6b3abc676a3b9cb5e1150cee 420 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 32 276 1.2E-68 T 09-03-2017 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 RG43_RS07200 8fdfc5b772bb357d9e57c9710e060f7e 372 Gene3D G3DSA:3.20.20.70 30 132 1.2E-9 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS07200 8fdfc5b772bb357d9e57c9710e060f7e 372 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 357 34.652 T 09-03-2017 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 RG43_RS07200 8fdfc5b772bb357d9e57c9710e060f7e 372 Pfam PF04551 GcpE protein 14 353 7.7E-132 T 09-03-2017 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 RG43_RS07200 8fdfc5b772bb357d9e57c9710e060f7e 372 SUPERFAMILY SSF51717 15 208 1.49E-10 T 09-03-2017 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RG43_RS07200 8fdfc5b772bb357d9e57c9710e060f7e 372 SUPERFAMILY SSF56014 265 350 9.81E-10 T 09-03-2017 RG43_RS07200 8fdfc5b772bb357d9e57c9710e060f7e 372 PIRSF PIRSF004640 1 363 2.0E-148 T 09-03-2017 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 RG43_RS07200 8fdfc5b772bb357d9e57c9710e060f7e 372 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 350 7.5E-126 T 09-03-2017 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 RG43_RS14120 65f1ab745d448bfe7095d94a43a08a48 291 SUPERFAMILY SSF55120 69 234 9.87E-43 T 09-03-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RG43_RS14120 65f1ab745d448bfe7095d94a43a08a48 291 Gene3D G3DSA:3.10.290.10 3 62 5.6E-15 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 RG43_RS14120 65f1ab745d448bfe7095d94a43a08a48 291 SUPERFAMILY SSF55174 5 98 5.59E-14 T 09-03-2017 RG43_RS14120 65f1ab745d448bfe7095d94a43a08a48 291 Pfam PF01479 S4 domain 4 43 4.6E-12 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 RG43_RS14120 65f1ab745d448bfe7095d94a43a08a48 291 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 107 121 - T 09-03-2017 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 RG43_RS14120 65f1ab745d448bfe7095d94a43a08a48 291 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 73 233 3.4E-64 T 09-03-2017 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 RG43_RS14120 65f1ab745d448bfe7095d94a43a08a48 291 SMART SM00363 3 74 5.0E-11 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 RG43_RS14120 65f1ab745d448bfe7095d94a43a08a48 291 Pfam PF00849 RNA pseudouridylate synthase 69 199 1.6E-15 T 09-03-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RG43_RS03350 8704ae7fbcf2df2c7da10f512c8edd60 381 Pfam PF02595 Glycerate kinase family 3 373 2.7E-150 T 09-03-2017 IPR004381 Glycerate kinase GO:0008887|GO:0031388 RG43_RS03350 8704ae7fbcf2df2c7da10f512c8edd60 381 SUPERFAMILY SSF110738 1 375 4.05E-142 T 09-03-2017 IPR004381 Glycerate kinase GO:0008887|GO:0031388 RG43_RS03350 8704ae7fbcf2df2c7da10f512c8edd60 381 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 1.1E-174 T 09-03-2017 IPR004381 Glycerate kinase GO:0008887|GO:0031388 RG43_RS03350 8704ae7fbcf2df2c7da10f512c8edd60 381 Gene3D G3DSA:3.90.1510.10 42 274 1.5E-100 T 09-03-2017 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 RG43_RS03350 8704ae7fbcf2df2c7da10f512c8edd60 381 PIRSF PIRSF006078 1 377 1.5E-141 T 09-03-2017 IPR004381 Glycerate kinase GO:0008887|GO:0031388 RG43_RS09815 952ba8bae94c9324a574530207a82307 388 Gene3D G3DSA:3.40.710.10 28 282 9.1E-95 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like RG43_RS09815 952ba8bae94c9324a574530207a82307 388 SUPERFAMILY SSF69189 282 375 1.28E-21 T 09-03-2017 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RG43_RS09815 952ba8bae94c9324a574530207a82307 388 SUPERFAMILY SSF56601 4 282 1.84E-76 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like RG43_RS09815 952ba8bae94c9324a574530207a82307 388 SMART SM00936 282 373 1.6E-26 T 09-03-2017 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RG43_RS09815 952ba8bae94c9324a574530207a82307 388 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 282 372 2.0E-20 T 09-03-2017 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RG43_RS09815 952ba8bae94c9324a574530207a82307 388 Gene3D G3DSA:2.60.410.10 283 373 9.6E-27 T 09-03-2017 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RG43_RS09815 952ba8bae94c9324a574530207a82307 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 62 73 1.8E-17 T 09-03-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RG43_RS09815 952ba8bae94c9324a574530207a82307 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 121 138 1.8E-17 T 09-03-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RG43_RS09815 952ba8bae94c9324a574530207a82307 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 148 161 1.8E-17 T 09-03-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RG43_RS09815 952ba8bae94c9324a574530207a82307 388 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 28 262 2.7E-99 T 09-03-2017 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 RG43_RS08225 136889803253545bfae1a190a9ddca94 260 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 253 1.4E-100 T 09-03-2017 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 RG43_RS08225 136889803253545bfae1a190a9ddca94 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 254 7.7E-63 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RG43_RS08225 136889803253545bfae1a190a9ddca94 260 Gene3D G3DSA:3.40.190.10 116 213 6.2E-32 T 09-03-2017 RG43_RS08225 136889803253545bfae1a190a9ddca94 260 SUPERFAMILY SSF53850 26 257 1.49E-65 T 09-03-2017 RG43_RS08225 136889803253545bfae1a190a9ddca94 260 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 50 63 - T 09-03-2017 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 RG43_RS08225 136889803253545bfae1a190a9ddca94 260 SMART SM00062 27 256 3.0E-78 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RG43_RS08225 136889803253545bfae1a190a9ddca94 260 Gene3D G3DSA:3.40.190.10 26 113 2.0E-44 T 09-03-2017 RG43_RS08225 136889803253545bfae1a190a9ddca94 260 Gene3D G3DSA:3.40.190.10 215 257 2.0E-44 T 09-03-2017 RG43_RS20685 c1007ed3267612be7edf083527af8d7a 270 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 2 20 4.4E-4 T 09-03-2017 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RG43_RS20685 c1007ed3267612be7edf083527af8d7a 270 Gene3D G3DSA:3.60.21.10 48 218 1.7E-18 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like RG43_RS20685 c1007ed3267612be7edf083527af8d7a 270 Pfam PF00149 Calcineurin-like phosphoesterase 49 211 8.3E-10 T 09-03-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RG43_RS20685 c1007ed3267612be7edf083527af8d7a 270 SUPERFAMILY SSF56300 49 219 2.81E-25 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like RG43_RS23600 34d7052280b152a27a6a4dbfeae1845b 274 Gene3D G3DSA:1.10.10.10 16 85 2.2E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS23600 34d7052280b152a27a6a4dbfeae1845b 274 SMART SM00346 24 114 5.8E-38 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RG43_RS23600 34d7052280b152a27a6a4dbfeae1845b 274 Gene3D G3DSA:3.30.450.40 96 271 8.4E-58 T 09-03-2017 IPR029016 GAF domain-like RG43_RS23600 34d7052280b152a27a6a4dbfeae1845b 274 SUPERFAMILY SSF55781 95 271 1.31E-49 T 09-03-2017 IPR029016 GAF domain-like RG43_RS23600 34d7052280b152a27a6a4dbfeae1845b 274 Pfam PF01614 Bacterial transcriptional regulator 145 267 1.3E-41 T 09-03-2017 IPR014757 Transcription regulator IclR, C-terminal RG43_RS23600 34d7052280b152a27a6a4dbfeae1845b 274 SUPERFAMILY SSF46785 24 97 2.37E-15 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS23600 34d7052280b152a27a6a4dbfeae1845b 274 Pfam PF09339 IclR helix-turn-helix domain 26 76 1.1E-18 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RG43_RS11425 8a1fdcb9d7402de36379aec599a3a2f2 481 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 10 107 8.8E-29 T 09-03-2017 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-6790901 RG43_RS11425 8a1fdcb9d7402de36379aec599a3a2f2 481 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 423 472 2.0E-9 T 09-03-2017 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RG43_RS11425 8a1fdcb9d7402de36379aec599a3a2f2 481 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 43 312 2.9E-118 T 09-03-2017 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-6790901 RG43_RS11425 8a1fdcb9d7402de36379aec599a3a2f2 481 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 190 201 - T 09-03-2017 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RG43_RS11425 8a1fdcb9d7402de36379aec599a3a2f2 481 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 8 477 66.077 T 09-03-2017 IPR023545 rRNA small subunit methyltransferase F GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RG43_RS11425 8a1fdcb9d7402de36379aec599a3a2f2 481 Pfam PF01189 16S rRNA methyltransferase RsmB/F 120 311 8.2E-47 T 09-03-2017 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RG43_RS11425 8a1fdcb9d7402de36379aec599a3a2f2 481 Gene3D G3DSA:3.40.50.150 104 312 4.0E-60 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS11425 8a1fdcb9d7402de36379aec599a3a2f2 481 SUPERFAMILY SSF53335 9 312 2.52E-68 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS11425 8a1fdcb9d7402de36379aec599a3a2f2 481 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 295 312 2.8E-28 T 09-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RG43_RS11425 8a1fdcb9d7402de36379aec599a3a2f2 481 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 241 257 2.8E-28 T 09-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RG43_RS11425 8a1fdcb9d7402de36379aec599a3a2f2 481 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 191 203 2.8E-28 T 09-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RG43_RS11425 8a1fdcb9d7402de36379aec599a3a2f2 481 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 124 134 2.8E-28 T 09-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RG43_RS11425 8a1fdcb9d7402de36379aec599a3a2f2 481 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 93 107 2.8E-28 T 09-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RG43_RS05925 c3683aa9e1a9e483774f6099f1ef3e05 433 Gene3D G3DSA:2.40.50.140 2 87 5.8E-32 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS05925 c3683aa9e1a9e483774f6099f1ef3e05 433 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 363 393 - T 09-03-2017 IPR030390 RNA methyltransferase TrmA, active site RG43_RS05925 c3683aa9e1a9e483774f6099f1ef3e05 433 Gene3D G3DSA:3.40.50.150 250 431 1.1E-63 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS05925 c3683aa9e1a9e483774f6099f1ef3e05 433 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 18 432 67.006 T 09-03-2017 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 RG43_RS05925 c3683aa9e1a9e483774f6099f1ef3e05 433 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 414 424 - T 09-03-2017 IPR030391 RNA methyltransferase TrmA, conserved site RG43_RS05925 c3683aa9e1a9e483774f6099f1ef3e05 433 SUPERFAMILY SSF53335 76 431 4.18E-94 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS05925 c3683aa9e1a9e483774f6099f1ef3e05 433 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 116 431 5.0E-28 T 09-03-2017 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 RG43_RS05925 c3683aa9e1a9e483774f6099f1ef3e05 433 SUPERFAMILY SSF50249 2 67 2.74E-14 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS05925 c3683aa9e1a9e483774f6099f1ef3e05 433 Pfam PF01938 TRAM domain 11 67 3.0E-13 T 09-03-2017 IPR002792 TRAM domain RG43_RS05925 c3683aa9e1a9e483774f6099f1ef3e05 433 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 24 424 2.5E-170 T 09-03-2017 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 RG43_RS05070 8b3d7b1ee9dbad9ab1866fc303396ff0 663 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 09-03-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 RG43_RS05070 8b3d7b1ee9dbad9ab1866fc303396ff0 663 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 5.8E-44 T 09-03-2017 IPR005475 Transketolase-like, pyrimidine-binding domain RG43_RS05070 8b3d7b1ee9dbad9ab1866fc303396ff0 663 Gene3D G3DSA:3.40.50.920 538 663 7.7E-53 T 09-03-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RG43_RS05070 8b3d7b1ee9dbad9ab1866fc303396ff0 663 Pfam PF02780 Transketolase, C-terminal domain 540 655 6.9E-20 T 09-03-2017 IPR033248 Transketolase, C-terminal domain RG43_RS05070 8b3d7b1ee9dbad9ab1866fc303396ff0 663 SMART SM00861 355 525 8.1E-66 T 09-03-2017 IPR005475 Transketolase-like, pyrimidine-binding domain RG43_RS05070 8b3d7b1ee9dbad9ab1866fc303396ff0 663 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 662 0.0 T 09-03-2017 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 RG43_RS05070 8b3d7b1ee9dbad9ab1866fc303396ff0 663 Gene3D G3DSA:3.40.50.970 4 320 2.1E-134 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS05070 8b3d7b1ee9dbad9ab1866fc303396ff0 663 SUPERFAMILY SSF52922 533 663 3.8E-44 T 09-03-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RG43_RS05070 8b3d7b1ee9dbad9ab1866fc303396ff0 663 Gene3D G3DSA:3.40.50.970 327 533 1.7E-80 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS05070 8b3d7b1ee9dbad9ab1866fc303396ff0 663 SUPERFAMILY SSF52518 5 331 2.3E-122 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS05070 8b3d7b1ee9dbad9ab1866fc303396ff0 663 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 09-03-2017 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 RG43_RS05070 8b3d7b1ee9dbad9ab1866fc303396ff0 663 SUPERFAMILY SSF52518 336 526 4.53E-67 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS05070 8b3d7b1ee9dbad9ab1866fc303396ff0 663 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 2.7E-174 T 09-03-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 RG43_RS06975 8ceb698f0aa0b9491fc60d01c78bde64 112 SUPERFAMILY SSF54913 1 112 8.58E-47 T 09-03-2017 IPR011322 Nitrogen regulatory PII-like, alpha/beta RG43_RS06975 8ceb698f0aa0b9491fc60d01c78bde64 112 PIRSF PIRSF039144 1 112 9.6E-58 T 09-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RG43_RS06975 8ceb698f0aa0b9491fc60d01c78bde64 112 PRINTS PR00340 P-II protein signature 2 17 2.3E-44 T 09-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RG43_RS06975 8ceb698f0aa0b9491fc60d01c78bde64 112 PRINTS PR00340 P-II protein signature 52 75 2.3E-44 T 09-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RG43_RS06975 8ceb698f0aa0b9491fc60d01c78bde64 112 PRINTS PR00340 P-II protein signature 23 41 2.3E-44 T 09-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RG43_RS06975 8ceb698f0aa0b9491fc60d01c78bde64 112 PRINTS PR00340 P-II protein signature 83 103 2.3E-44 T 09-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RG43_RS06975 8ceb698f0aa0b9491fc60d01c78bde64 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.1E-44 T 09-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RG43_RS06975 8ceb698f0aa0b9491fc60d01c78bde64 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 09-03-2017 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 RG43_RS06975 8ceb698f0aa0b9491fc60d01c78bde64 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 09-03-2017 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 RG43_RS06975 8ceb698f0aa0b9491fc60d01c78bde64 112 SMART SM00938 4 105 4.1E-68 T 09-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RG43_RS06975 8ceb698f0aa0b9491fc60d01c78bde64 112 Gene3D G3DSA:3.30.70.120 1 112 1.5E-51 T 09-03-2017 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RG43_RS01405 d9059dc2a41e2a8b251c4016029bfe3e 280 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 241 247 - T 09-03-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RG43_RS01405 d9059dc2a41e2a8b251c4016029bfe3e 280 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 278 1.5E-119 T 09-03-2017 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 RG43_RS01405 d9059dc2a41e2a8b251c4016029bfe3e 280 SUPERFAMILY SSF53335 9 279 2.53E-100 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS01405 d9059dc2a41e2a8b251c4016029bfe3e 280 Gene3D G3DSA:3.40.50.150 1 280 7.2E-121 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS01405 d9059dc2a41e2a8b251c4016029bfe3e 280 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 161 167 - T 09-03-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RG43_RS01405 d9059dc2a41e2a8b251c4016029bfe3e 280 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 41.998 T 09-03-2017 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 RG43_RS01410 e639bbf9356eb1b367d4a2a19f75bd92 680 Gene3D G3DSA:3.40.390.10 360 504 1.6E-61 T 09-03-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 RG43_RS01410 e639bbf9356eb1b367d4a2a19f75bd92 680 Gene3D G3DSA:1.20.1050.40 7 138 6.0E-25 T 09-03-2017 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal RG43_RS01410 e639bbf9356eb1b367d4a2a19f75bd92 680 Gene3D G3DSA:1.10.1370.10 140 349 1.9E-147 T 09-03-2017 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 RG43_RS01410 e639bbf9356eb1b367d4a2a19f75bd92 680 Gene3D G3DSA:1.10.1370.10 505 678 1.9E-147 T 09-03-2017 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 RG43_RS01410 e639bbf9356eb1b367d4a2a19f75bd92 680 Pfam PF01432 Peptidase family M3 222 677 2.4E-177 T 09-03-2017 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 RG43_RS01410 e639bbf9356eb1b367d4a2a19f75bd92 680 SUPERFAMILY SSF55486 1 677 6.72E-215 T 09-03-2017 RG43_RS02335 9867918b318a5d77dad4d3fd94c79f4f 271 Gene3D G3DSA:2.30.42.10 205 260 4.1E-6 T 09-03-2017 IPR001478 PDZ domain GO:0005515 RG43_RS02335 9867918b318a5d77dad4d3fd94c79f4f 271 Pfam PF11356 Type II secretion system protein C 77 152 7.0E-8 T 09-03-2017 IPR024961 Type II secretion system protein C, N-terminal RG43_RS02335 9867918b318a5d77dad4d3fd94c79f4f 271 ProSitePatterns PS01141 Bacterial type II secretion system protein C signature. 194 220 - T 09-03-2017 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 RG43_RS02335 9867918b318a5d77dad4d3fd94c79f4f 271 SUPERFAMILY SSF50156 169 254 1.91E-8 T 09-03-2017 IPR001478 PDZ domain GO:0005515 RG43_RS02335 9867918b318a5d77dad4d3fd94c79f4f 271 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 17 256 2.3E-87 T 09-03-2017 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 RG43_RS02365 a9eb05a116a704d31881e542cf92b1be 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.603 T 09-03-2017 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 RG43_RS02365 a9eb05a116a704d31881e542cf92b1be 100 SUPERFAMILY SSF54189 6 97 2.66E-30 T 09-03-2017 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS02365 a9eb05a116a704d31881e542cf92b1be 100 Gene3D G3DSA:3.30.70.330 6 98 3.3E-34 T 09-03-2017 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 RG43_RS02365 a9eb05a116a704d31881e542cf92b1be 100 Pfam PF00276 Ribosomal protein L23 9 95 6.0E-31 T 09-03-2017 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 RG43_RS02365 a9eb05a116a704d31881e542cf92b1be 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 09-03-2017 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS05945 d196eab62d33c61927f63166a310bad3 432 Pfam PF03952 Enolase, N-terminal domain 4 134 5.7E-59 T 09-03-2017 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RG43_RS05945 d196eab62d33c61927f63166a310bad3 432 Gene3D G3DSA:3.30.390.10 3 127 2.1E-55 T 09-03-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RG43_RS05945 d196eab62d33c61927f63166a310bad3 432 Hamap MF_00318 Enolase [eno]. 2 416 44.545 T 09-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RG43_RS05945 d196eab62d33c61927f63166a310bad3 432 ProSitePatterns PS00164 Enolase signature. 339 352 - T 09-03-2017 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS05945 d196eab62d33c61927f63166a310bad3 432 SMART SM01192 143 430 1.3E-215 T 09-03-2017 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RG43_RS05945 d196eab62d33c61927f63166a310bad3 432 PIRSF PIRSF001400 1 430 4.0E-194 T 09-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RG43_RS05945 d196eab62d33c61927f63166a310bad3 432 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 428 8.8E-207 T 09-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RG43_RS05945 d196eab62d33c61927f63166a310bad3 432 Gene3D G3DSA:3.20.20.120 128 429 3.0E-138 T 09-03-2017 IPR029065 Enolase C-terminal domain-like RG43_RS05945 d196eab62d33c61927f63166a310bad3 432 SUPERFAMILY SSF54826 3 138 3.71E-57 T 09-03-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RG43_RS05945 d196eab62d33c61927f63166a310bad3 432 SUPERFAMILY SSF51604 143 427 9.34E-129 T 09-03-2017 IPR029065 Enolase C-terminal domain-like RG43_RS05945 d196eab62d33c61927f63166a310bad3 432 SMART SM01193 4 134 2.6E-94 T 09-03-2017 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RG43_RS05945 d196eab62d33c61927f63166a310bad3 432 PRINTS PR00148 Enolase signature 339 353 3.9E-44 T 09-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RG43_RS05945 d196eab62d33c61927f63166a310bad3 432 PRINTS PR00148 Enolase signature 368 385 3.9E-44 T 09-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RG43_RS05945 d196eab62d33c61927f63166a310bad3 432 PRINTS PR00148 Enolase signature 37 51 3.9E-44 T 09-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RG43_RS05945 d196eab62d33c61927f63166a310bad3 432 PRINTS PR00148 Enolase signature 165 178 3.9E-44 T 09-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RG43_RS05945 d196eab62d33c61927f63166a310bad3 432 PRINTS PR00148 Enolase signature 316 327 3.9E-44 T 09-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RG43_RS05945 d196eab62d33c61927f63166a310bad3 432 PRINTS PR00148 Enolase signature 107 123 3.9E-44 T 09-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RG43_RS05945 d196eab62d33c61927f63166a310bad3 432 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 429 6.0E-143 T 09-03-2017 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RG43_RS02055 982917b56e1045f75833c07e3d0c9153 301 Pfam PF14502 Helix-turn-helix domain 24 71 5.0E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS02055 982917b56e1045f75833c07e3d0c9153 301 Gene3D G3DSA:1.10.10.10 25 75 4.9E-6 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS02055 982917b56e1045f75833c07e3d0c9153 301 SUPERFAMILY SSF53850 74 301 4.01E-82 T 09-03-2017 RG43_RS02055 982917b56e1045f75833c07e3d0c9153 301 Gene3D G3DSA:3.40.190.10 76 208 4.2E-66 T 09-03-2017 RG43_RS02055 982917b56e1045f75833c07e3d0c9153 301 Pfam PF14503 YhfZ C-terminal domain 75 301 2.4E-84 T 09-03-2017 IPR032791 Uncharacterised protein YhfZ, C-terminal domain RG43_RS16105 7e84a39c8159cc86edd5b43e22f606f5 287 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 277 6.7E-117 T 09-03-2017 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 RG43_RS18865 43b40eec41574e304aeb711bfdc83b82 163 Gene3D G3DSA:3.30.70.860 98 163 1.2E-35 T 09-03-2017 RG43_RS18865 43b40eec41574e304aeb711bfdc83b82 163 Gene3D G3DSA:3.30.70.990 9 97 6.1E-37 T 09-03-2017 RG43_RS18865 43b40eec41574e304aeb711bfdc83b82 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 163 30.408 T 09-03-2017 IPR007551 Protein of unknown function DUF520 RG43_RS18865 43b40eec41574e304aeb711bfdc83b82 163 Pfam PF04461 Protein of unknown function (DUF520) 2 162 1.6E-65 T 09-03-2017 IPR007551 Protein of unknown function DUF520 RG43_RS18865 43b40eec41574e304aeb711bfdc83b82 163 SUPERFAMILY SSF89963 91 163 1.99E-29 T 09-03-2017 IPR007551 Protein of unknown function DUF520 RG43_RS18865 43b40eec41574e304aeb711bfdc83b82 163 SUPERFAMILY SSF89963 2 89 2.88E-30 T 09-03-2017 IPR007551 Protein of unknown function DUF520 RG43_RS16255 838be18380e65d04e278fa28c52778ad 572 SUPERFAMILY SSF52518 2 173 6.1E-43 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS16255 838be18380e65d04e278fa28c52778ad 572 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 170 9.0E-42 T 09-03-2017 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 RG43_RS16255 838be18380e65d04e278fa28c52778ad 572 SUPERFAMILY SSF52518 357 557 2.03E-59 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS16255 838be18380e65d04e278fa28c52778ad 572 Gene3D G3DSA:3.40.50.1220 185 341 2.7E-43 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain RG43_RS16255 838be18380e65d04e278fa28c52778ad 572 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 416 435 - T 09-03-2017 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 RG43_RS16255 838be18380e65d04e278fa28c52778ad 572 Gene3D G3DSA:3.40.50.970 350 550 1.1E-60 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS16255 838be18380e65d04e278fa28c52778ad 572 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 192 319 1.1E-29 T 09-03-2017 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 RG43_RS16255 838be18380e65d04e278fa28c52778ad 572 Gene3D G3DSA:3.40.50.970 1 172 2.2E-51 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS16255 838be18380e65d04e278fa28c52778ad 572 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 379 525 6.0E-40 T 09-03-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RG43_RS16255 838be18380e65d04e278fa28c52778ad 572 SUPERFAMILY SSF52467 182 352 6.1E-43 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain RG43_RS26440 5a63f19958582df7dfebe58fd8156b42 443 Pfam PF13347 MFS/sugar transport protein 10 427 4.8E-100 T 09-03-2017 RG43_RS26440 5a63f19958582df7dfebe58fd8156b42 443 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 8 439 1.8E-104 T 09-03-2017 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 RG43_RS26440 5a63f19958582df7dfebe58fd8156b42 443 SUPERFAMILY SSF103473 12 416 3.27E-31 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS26440 5a63f19958582df7dfebe58fd8156b42 443 Gene3D G3DSA:1.20.1250.20 17 204 1.1E-14 T 09-03-2017 RG43_RS26440 5a63f19958582df7dfebe58fd8156b42 443 Gene3D G3DSA:1.20.1250.20 224 421 2.5E-6 T 09-03-2017 RG43_RS04065 5a63f19958582df7dfebe58fd8156b42 443 Pfam PF13347 MFS/sugar transport protein 10 427 4.8E-100 T 09-03-2017 RG43_RS04065 5a63f19958582df7dfebe58fd8156b42 443 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 8 439 1.8E-104 T 09-03-2017 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 RG43_RS04065 5a63f19958582df7dfebe58fd8156b42 443 SUPERFAMILY SSF103473 12 416 3.27E-31 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS04065 5a63f19958582df7dfebe58fd8156b42 443 Gene3D G3DSA:1.20.1250.20 17 204 1.1E-14 T 09-03-2017 RG43_RS04065 5a63f19958582df7dfebe58fd8156b42 443 Gene3D G3DSA:1.20.1250.20 224 421 2.5E-6 T 09-03-2017 RG43_RS21110 934467f62e95417cf470456df3c85b9b 452 Gene3D G3DSA:3.40.1390.10 1 80 4.2E-26 T 09-03-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 RG43_RS21110 934467f62e95417cf470456df3c85b9b 452 SUPERFAMILY SSF53244 313 446 2.2E-38 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 RG43_RS21110 934467f62e95417cf470456df3c85b9b 452 Pfam PF02875 Mur ligase family, glutamate ligase domain 313 394 2.8E-15 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 RG43_RS21110 934467f62e95417cf470456df3c85b9b 452 SUPERFAMILY SSF63418 1 97 2.35E-28 T 09-03-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 RG43_RS21110 934467f62e95417cf470456df3c85b9b 452 Pfam PF08245 Mur ligase middle domain 106 292 4.5E-52 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RG43_RS21110 934467f62e95417cf470456df3c85b9b 452 Gene3D G3DSA:3.40.1190.10 82 310 1.0E-76 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RG43_RS21110 934467f62e95417cf470456df3c85b9b 452 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 447 34.756 T 09-03-2017 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RG43_RS21110 934467f62e95417cf470456df3c85b9b 452 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 446 2.5E-143 T 09-03-2017 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RG43_RS21110 934467f62e95417cf470456df3c85b9b 452 Gene3D G3DSA:3.90.190.20 313 448 8.7E-46 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 RG43_RS21110 934467f62e95417cf470456df3c85b9b 452 Pfam PF01225 Mur ligase family, catalytic domain 26 98 2.8E-9 T 09-03-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 RG43_RS21110 934467f62e95417cf470456df3c85b9b 452 SUPERFAMILY SSF53623 100 310 4.45E-60 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RG43_RS23950 eba8848fc058c67a6f958cd8ac24c447 334 Gene3D G3DSA:3.40.50.720 1 162 1.6E-62 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS23950 eba8848fc058c67a6f958cd8ac24c447 334 SMART SM00859 3 146 7.2E-53 T 09-03-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RG43_RS23950 eba8848fc058c67a6f958cd8ac24c447 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 163 311 7.6E-20 T 09-03-2017 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 RG43_RS23950 eba8848fc058c67a6f958cd8ac24c447 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 3.1E-124 T 09-03-2017 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 RG43_RS23950 eba8848fc058c67a6f958cd8ac24c447 334 Gene3D G3DSA:3.30.360.10 163 308 6.2E-48 T 09-03-2017 RG43_RS23950 eba8848fc058c67a6f958cd8ac24c447 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 09-03-2017 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 RG43_RS23950 eba8848fc058c67a6f958cd8ac24c447 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 38.081 T 09-03-2017 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 RG43_RS23950 eba8848fc058c67a6f958cd8ac24c447 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 146 2.8E-32 T 09-03-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RG43_RS23950 eba8848fc058c67a6f958cd8ac24c447 334 SUPERFAMILY SSF51735 1 170 3.77E-49 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS23950 eba8848fc058c67a6f958cd8ac24c447 334 SUPERFAMILY SSF55347 154 308 5.61E-49 T 09-03-2017 RG43_RS18130 1bfb1253ebfe7947dd593f0fbae537c9 416 Gene3D G3DSA:1.20.1250.20 239 403 1.9E-12 T 09-03-2017 RG43_RS18130 1bfb1253ebfe7947dd593f0fbae537c9 416 Gene3D G3DSA:1.20.1250.20 16 206 7.3E-22 T 09-03-2017 RG43_RS18130 1bfb1253ebfe7947dd593f0fbae537c9 416 Hamap MF_01436 Enterobactin exporter EntS [entS]. 1 414 43.556 T 09-03-2017 IPR023722 Enterobactin exporter, EntS GO:0005886|GO:0042930|GO:0042931 RG43_RS18130 1bfb1253ebfe7947dd593f0fbae537c9 416 Pfam PF05977 Transmembrane secretion effector 16 405 4.4E-20 T 09-03-2017 IPR010290 Transmembrane secretion effector RG43_RS18130 1bfb1253ebfe7947dd593f0fbae537c9 416 SUPERFAMILY SSF103473 16 403 2.09E-41 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS24190 1849437f91007d95834bae7eee5e902b 320 PIRSF PIRSF000532 1 320 1.6E-131 T 09-03-2017 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 RG43_RS24190 1849437f91007d95834bae7eee5e902b 320 Gene3D G3DSA:3.40.50.450 2 215 5.0E-76 T 09-03-2017 RG43_RS24190 1849437f91007d95834bae7eee5e902b 320 SUPERFAMILY SSF53784 3 309 3.14E-114 T 09-03-2017 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RG43_RS24190 1849437f91007d95834bae7eee5e902b 320 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 09-03-2017 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RG43_RS24190 1849437f91007d95834bae7eee5e902b 320 Pfam PF00365 Phosphofructokinase 4 276 3.4E-107 T 09-03-2017 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RG43_RS24190 1849437f91007d95834bae7eee5e902b 320 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 320 47.16 T 09-03-2017 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 RG43_RS24190 1849437f91007d95834bae7eee5e902b 320 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 301 1.9E-124 T 09-03-2017 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 RG43_RS24190 1849437f91007d95834bae7eee5e902b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 1.9E-82 T 09-03-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RG43_RS24190 1849437f91007d95834bae7eee5e902b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 1.9E-82 T 09-03-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RG43_RS24190 1849437f91007d95834bae7eee5e902b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 1.9E-82 T 09-03-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RG43_RS24190 1849437f91007d95834bae7eee5e902b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 1.9E-82 T 09-03-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RG43_RS24190 1849437f91007d95834bae7eee5e902b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 1.9E-82 T 09-03-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RG43_RS24190 1849437f91007d95834bae7eee5e902b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 1.9E-82 T 09-03-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RG43_RS24190 1849437f91007d95834bae7eee5e902b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 1.9E-82 T 09-03-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RG43_RS24190 1849437f91007d95834bae7eee5e902b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 1.9E-82 T 09-03-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RG43_RS24190 1849437f91007d95834bae7eee5e902b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 1.9E-82 T 09-03-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RG43_RS16580 36aa46c3c11c46dd41f216524ccbb299 167 Pfam PF00210 Ferritin-like domain 31 166 5.5E-22 T 09-03-2017 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 RG43_RS16580 36aa46c3c11c46dd41f216524ccbb299 167 Hamap MF_01441 DNA protection during starvation protein [dps]. 1 167 50.452 T 09-03-2017 IPR023067 DNA protection during starvation protein, gammaproteobacteria GO:0016722|GO:0055114 RG43_RS16580 36aa46c3c11c46dd41f216524ccbb299 167 ProSitePatterns PS00819 Dps protein family signature 2. 77 91 - T 09-03-2017 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 RG43_RS16580 36aa46c3c11c46dd41f216524ccbb299 167 PIRSF PIRSF005900 8 167 2.3E-43 T 09-03-2017 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 RG43_RS16580 36aa46c3c11c46dd41f216524ccbb299 167 ProSitePatterns PS00818 Dps protein family signature 1. 51 67 - T 09-03-2017 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 RG43_RS16580 36aa46c3c11c46dd41f216524ccbb299 167 Gene3D G3DSA:1.20.1260.10 2 167 1.4E-53 T 09-03-2017 IPR012347 Ferritin-related RG43_RS16580 36aa46c3c11c46dd41f216524ccbb299 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 51 67 1.9E-13 T 09-03-2017 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 RG43_RS16580 36aa46c3c11c46dd41f216524ccbb299 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 75 91 1.9E-13 T 09-03-2017 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 RG43_RS16580 36aa46c3c11c46dd41f216524ccbb299 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 144 162 1.9E-13 T 09-03-2017 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 RG43_RS16580 36aa46c3c11c46dd41f216524ccbb299 167 SUPERFAMILY SSF47240 10 167 5.13E-50 T 09-03-2017 IPR009078 Ferritin-like superfamily RG43_RS25255 4f3bd13ffc0a183c15498e375df85b6a 673 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 667 0.0 T 09-03-2017 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 RG43_RS25255 4f3bd13ffc0a183c15498e375df85b6a 673 Gene3D G3DSA:1.10.486.10 383 525 6.3E-41 T 09-03-2017 RG43_RS25255 4f3bd13ffc0a183c15498e375df85b6a 673 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 3.6E-73 T 09-03-2017 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RG43_RS25255 4f3bd13ffc0a183c15498e375df85b6a 673 Gene3D G3DSA:3.40.50.300 550 637 6.5E-64 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25255 4f3bd13ffc0a183c15498e375df85b6a 673 Gene3D G3DSA:3.40.50.300 280 382 6.5E-64 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25255 4f3bd13ffc0a183c15498e375df85b6a 673 Gene3D G3DSA:3.40.50.300 2 104 4.0E-65 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25255 4f3bd13ffc0a183c15498e375df85b6a 673 Gene3D G3DSA:3.40.50.300 182 279 4.0E-65 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25255 4f3bd13ffc0a183c15498e375df85b6a 673 Pfam PF13361 UvrD-like helicase C-terminal domain 271 613 7.2E-71 T 09-03-2017 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RG43_RS25255 4f3bd13ffc0a183c15498e375df85b6a 673 Gene3D G3DSA:1.10.10.160 108 181 3.1E-25 T 09-03-2017 IPR013986 DExx box DNA helicase domain RG43_RS25255 4f3bd13ffc0a183c15498e375df85b6a 673 SUPERFAMILY SSF52540 2 636 9.0E-163 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25255 4f3bd13ffc0a183c15498e375df85b6a 673 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 668 41.212 T 09-03-2017 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 RG43_RS24840 75b0f62d3b2dde5d77e1e1680a6e0e2c 546 Gene3D G3DSA:3.30.200.20 193 228 4.8E-4 T 09-03-2017 RG43_RS24840 75b0f62d3b2dde5d77e1e1680a6e0e2c 546 Gene3D G3DSA:3.30.200.20 127 157 4.8E-4 T 09-03-2017 RG43_RS24840 75b0f62d3b2dde5d77e1e1680a6e0e2c 546 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 7 446 2.0E-187 T 09-03-2017 IPR010232 Probable protein kinase UbiB GO:0006744 RG43_RS24840 75b0f62d3b2dde5d77e1e1680a6e0e2c 546 SUPERFAMILY SSF56112 94 159 3.27E-49 T 09-03-2017 IPR011009 Protein kinase-like domain RG43_RS24840 75b0f62d3b2dde5d77e1e1680a6e0e2c 546 SUPERFAMILY SSF56112 194 438 3.27E-49 T 09-03-2017 IPR011009 Protein kinase-like domain RG43_RS24840 75b0f62d3b2dde5d77e1e1680a6e0e2c 546 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 542 56.997 T 09-03-2017 IPR010232 Probable protein kinase UbiB GO:0006744 RG43_RS24840 75b0f62d3b2dde5d77e1e1680a6e0e2c 546 Pfam PF03109 ABC1 family 116 232 1.2E-34 T 09-03-2017 IPR004147 UbiB domain RG43_RS25165 3b7999815a5bae979c47ae8dceeaa7a3 246 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 66 231 1.7E-52 T 09-03-2017 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 RG43_RS25165 3b7999815a5bae979c47ae8dceeaa7a3 246 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 60 237 8.3E-82 T 09-03-2017 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 RG43_RS25165 3b7999815a5bae979c47ae8dceeaa7a3 246 Hamap MF_01001 UDP-N-acetyl-D-mannosaminuronic acid transferase [wecG]. 1 246 61.281 T 09-03-2017 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase GO:0009246|GO:0016758 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 RG43_RS21685 80b9fb3b0fb93a69c194540ec590b065 287 Pfam PF04055 Radical SAM superfamily 27 232 7.0E-24 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 RG43_RS21685 80b9fb3b0fb93a69c194540ec590b065 287 Gene3D G3DSA:3.30.70.20 44 96 2.1E-11 T 09-03-2017 RG43_RS21685 80b9fb3b0fb93a69c194540ec590b065 287 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 47 58 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS21685 80b9fb3b0fb93a69c194540ec590b065 287 Gene3D G3DSA:3.80.30.10 113 281 3.4E-44 T 09-03-2017 RG43_RS21685 80b9fb3b0fb93a69c194540ec590b065 287 Pfam PF13353 4Fe-4S single cluster domain 17 169 3.0E-9 T 09-03-2017 RG43_RS21685 80b9fb3b0fb93a69c194540ec590b065 287 SUPERFAMILY SSF54862 12 117 1.96E-13 T 09-03-2017 RG43_RS21685 80b9fb3b0fb93a69c194540ec590b065 287 SUPERFAMILY SSF102114 85 275 1.53E-14 T 09-03-2017 RG43_RS21685 80b9fb3b0fb93a69c194540ec590b065 287 ProSitePatterns PS01087 Radical activating enzymes signature. 19 40 - T 09-03-2017 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 RG43_RS21685 80b9fb3b0fb93a69c194540ec590b065 287 PIRSF PIRSF000371 1 287 8.4E-97 T 09-03-2017 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 RG43_RS21685 80b9fb3b0fb93a69c194540ec590b065 287 TIGRFAM TIGR04041 activase_YjjW: glycine radical enzyme activase, YjjW family 5 282 6.2E-120 T 09-03-2017 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW RG43_RS21685 80b9fb3b0fb93a69c194540ec590b065 287 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 76 87 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS16290 70563109a451dc689384814cec661e65 242 Gene3D G3DSA:3.40.50.300 3 237 5.6E-74 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16290 70563109a451dc689384814cec661e65 242 SMART SM00382 27 218 5.0E-13 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS16290 70563109a451dc689384814cec661e65 242 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS16290 70563109a451dc689384814cec661e65 242 SUPERFAMILY SSF52540 3 232 1.14E-69 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16290 70563109a451dc689384814cec661e65 242 PIRSF PIRSF039085 1 242 8.2E-85 T 09-03-2017 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 RG43_RS16290 70563109a451dc689384814cec661e65 242 Pfam PF00005 ABC transporter 20 170 5.0E-35 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS06215 780281db93fb4a0bfedafcc836ae330f 142 SUPERFAMILY SSF50331 47 138 4.37E-19 T 09-03-2017 IPR008995 Molybdate/tungstate binding, C-terminal RG43_RS06215 780281db93fb4a0bfedafcc836ae330f 142 Pfam PF03459 TOBE domain 4 66 2.3E-16 T 09-03-2017 IPR005116 Transport-associated OB, type 1 RG43_RS06215 780281db93fb4a0bfedafcc836ae330f 142 Pfam PF03459 TOBE domain 76 136 2.7E-15 T 09-03-2017 IPR005116 Transport-associated OB, type 1 RG43_RS06215 780281db93fb4a0bfedafcc836ae330f 142 SUPERFAMILY SSF50331 1 71 2.92E-21 T 09-03-2017 IPR008995 Molybdate/tungstate binding, C-terminal RG43_RS06215 780281db93fb4a0bfedafcc836ae330f 142 Gene3D G3DSA:2.40.50.100 1 69 2.6E-29 T 09-03-2017 RG43_RS06215 780281db93fb4a0bfedafcc836ae330f 142 Gene3D G3DSA:2.40.50.100 72 141 1.0E-25 T 09-03-2017 RG43_RS06215 780281db93fb4a0bfedafcc836ae330f 142 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 73 140 3.9E-19 T 09-03-2017 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 RG43_RS06215 780281db93fb4a0bfedafcc836ae330f 142 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 2 69 1.5E-23 T 09-03-2017 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 RG43_RS00035 2e5a2cdcc4f5842e56a1dd8e50da037e 234 Gene3D G3DSA:1.10.3410.10 33 122 4.4E-14 T 09-03-2017 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain RG43_RS00035 2e5a2cdcc4f5842e56a1dd8e50da037e 234 SUPERFAMILY SSF109604 30 230 3.14E-13 T 09-03-2017 RG43_RS00035 2e5a2cdcc4f5842e56a1dd8e50da037e 234 Gene3D G3DSA:1.10.3550.10 155 228 3.6E-7 T 09-03-2017 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain RG43_RS00035 2e5a2cdcc4f5842e56a1dd8e50da037e 234 Pfam PF13286 Phosphohydrolase-associated domain 142 229 9.9E-16 T 09-03-2017 IPR026875 Phosphohydrolase-associated domain RG43_RS23455 064705018c8c47f10c8f61aaadf1e052 306 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 76 209 1.5E-50 T 09-03-2017 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 RG43_RS01030 dc779be56fe8762e0ed1914997be97ce 230 Gene3D G3DSA:3.30.420.10 57 212 3.7E-35 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS01030 dc779be56fe8762e0ed1914997be97ce 230 Pfam PF00665 Integrase core domain 62 176 1.1E-25 T 09-03-2017 IPR001584 Integrase, catalytic core GO:0015074 RG43_RS01030 dc779be56fe8762e0ed1914997be97ce 230 SUPERFAMILY SSF53098 59 214 4.86E-37 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS01880 dc779be56fe8762e0ed1914997be97ce 230 Gene3D G3DSA:3.30.420.10 57 212 3.7E-35 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS01880 dc779be56fe8762e0ed1914997be97ce 230 Pfam PF00665 Integrase core domain 62 176 1.1E-25 T 09-03-2017 IPR001584 Integrase, catalytic core GO:0015074 RG43_RS01880 dc779be56fe8762e0ed1914997be97ce 230 SUPERFAMILY SSF53098 59 214 4.86E-37 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS19205 60e48eae92cc974996514bdfa9c0fae0 277 Pfam PF00756 Putative esterase 21 268 3.2E-76 T 09-03-2017 IPR000801 Putative esterase Reactome: R-HSA-156590 RG43_RS19205 60e48eae92cc974996514bdfa9c0fae0 277 SUPERFAMILY SSF53474 1 275 1.51E-83 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS19205 60e48eae92cc974996514bdfa9c0fae0 277 Gene3D G3DSA:3.40.50.1820 1 275 3.0E-78 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS19205 60e48eae92cc974996514bdfa9c0fae0 277 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 2 274 1.3E-119 T 09-03-2017 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 RG43_RS16070 61b646950d110aff8f6777315807ff2b 285 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 14 279 7.9E-129 T 09-03-2017 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 RG43_RS16070 61b646950d110aff8f6777315807ff2b 285 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 83 92 - T 09-03-2017 IPR024002 Formate/nitrite transporter, conserved site RG43_RS16070 61b646950d110aff8f6777315807ff2b 285 Gene3D G3DSA:1.20.1080.10 29 280 8.6E-91 T 09-03-2017 IPR023271 Aquaporin-like Reactome: R-HSA-432047 RG43_RS16070 61b646950d110aff8f6777315807ff2b 285 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 26 280 4.6E-98 T 09-03-2017 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 RG43_RS16070 61b646950d110aff8f6777315807ff2b 285 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 168 178 - T 09-03-2017 IPR024002 Formate/nitrite transporter, conserved site RG43_RS16070 61b646950d110aff8f6777315807ff2b 285 Pfam PF01226 Formate/nitrite transporter 15 276 2.7E-76 T 09-03-2017 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 RG43_RS13205 0c09e50b642cf4b7a0d43f05b9e0ca64 1246 Pfam PF01568 Molydopterin dinucleotide binding domain 1087 1199 4.4E-20 T 09-03-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RG43_RS13205 0c09e50b642cf4b7a0d43f05b9e0ca64 1246 Gene3D G3DSA:3.40.228.10 486 591 2.6E-77 T 09-03-2017 RG43_RS13205 0c09e50b642cf4b7a0d43f05b9e0ca64 1246 Gene3D G3DSA:3.40.228.10 218 336 2.6E-77 T 09-03-2017 RG43_RS13205 0c09e50b642cf4b7a0d43f05b9e0ca64 1246 Gene3D G3DSA:3.90.55.10 779 833 3.7E-7 T 09-03-2017 RG43_RS13205 0c09e50b642cf4b7a0d43f05b9e0ca64 1246 SMART SM00926 43 105 1.9E-7 T 09-03-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS13205 0c09e50b642cf4b7a0d43f05b9e0ca64 1246 Gene3D G3DSA:2.20.25.90 52 98 1.0E-31 T 09-03-2017 RG43_RS13205 0c09e50b642cf4b7a0d43f05b9e0ca64 1246 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 1124 1151 - T 09-03-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 RG43_RS13205 0c09e50b642cf4b7a0d43f05b9e0ca64 1246 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 776 793 - T 09-03-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 RG43_RS13205 0c09e50b642cf4b7a0d43f05b9e0ca64 1246 Gene3D G3DSA:2.40.40.20 1054 1233 1.6E-43 T 09-03-2017 RG43_RS13205 0c09e50b642cf4b7a0d43f05b9e0ca64 1246 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 2 1234 0.0 T 09-03-2017 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 RG43_RS13205 0c09e50b642cf4b7a0d43f05b9e0ca64 1246 SUPERFAMILY SSF50692 1082 1235 1.42E-45 T 09-03-2017 IPR009010 Aspartate decarboxylase-like domain RG43_RS13205 0c09e50b642cf4b7a0d43f05b9e0ca64 1246 SUPERFAMILY SSF53706 5 1070 0.0 T 09-03-2017 RG43_RS13205 0c09e50b642cf4b7a0d43f05b9e0ca64 1246 Gene3D G3DSA:4.10.1200.10 1 28 5.6E-19 T 09-03-2017 RG43_RS13205 0c09e50b642cf4b7a0d43f05b9e0ca64 1246 Gene3D G3DSA:3.40.50.740 108 117 8.9E-4 T 09-03-2017 RG43_RS13205 0c09e50b642cf4b7a0d43f05b9e0ca64 1246 Gene3D G3DSA:3.40.50.740 149 205 8.9E-4 T 09-03-2017 RG43_RS13205 0c09e50b642cf4b7a0d43f05b9e0ca64 1246 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 09-03-2017 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 RG43_RS13205 0c09e50b642cf4b7a0d43f05b9e0ca64 1246 Pfam PF00384 Molybdopterin oxidoreductase 108 832 1.1E-166 T 09-03-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS13205 0c09e50b642cf4b7a0d43f05b9e0ca64 1246 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 4 40 1.4E-16 T 09-03-2017 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.99.4 RG43_RS13205 0c09e50b642cf4b7a0d43f05b9e0ca64 1246 Gene3D G3DSA:3.40.50.740 592 778 2.8E-59 T 09-03-2017 RG43_RS07835 f90eb5313ad6c83397045c57afb8d33f 244 SUPERFAMILY SSF52172 2 162 2.13E-26 T 09-03-2017 IPR011006 CheY-like superfamily RG43_RS07835 f90eb5313ad6c83397045c57afb8d33f 244 Gene3D G3DSA:2.40.50.40 136 205 8.8E-26 T 09-03-2017 RG43_RS07835 f90eb5313ad6c83397045c57afb8d33f 244 SMART SM00850 145 243 3.2E-39 T 09-03-2017 IPR007492 LytTR DNA-binding domain GO:0003677 RG43_RS07835 f90eb5313ad6c83397045c57afb8d33f 244 Gene3D G3DSA:2.20.25.10 206 244 5.2E-14 T 09-03-2017 RG43_RS07835 f90eb5313ad6c83397045c57afb8d33f 244 Gene3D G3DSA:3.40.50.2300 2 126 9.1E-30 T 09-03-2017 RG43_RS07835 f90eb5313ad6c83397045c57afb8d33f 244 Pfam PF04397 LytTr DNA-binding domain 146 242 2.3E-33 T 09-03-2017 IPR007492 LytTR DNA-binding domain GO:0003677 RG43_RS07835 f90eb5313ad6c83397045c57afb8d33f 244 Pfam PF00072 Response regulator receiver domain 3 112 1.6E-23 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS07835 f90eb5313ad6c83397045c57afb8d33f 244 SMART SM00448 1 112 1.4E-19 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS26920 e342dde1428e282038613fd1098f0d8b 294 SUPERFAMILY SSF52540 14 166 3.02E-25 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS26920 e342dde1428e282038613fd1098f0d8b 294 Gene3D G3DSA:3.40.50.300 51 224 2.0E-25 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS26920 e342dde1428e282038613fd1098f0d8b 294 Gene3D G3DSA:3.40.50.300 21 50 3.2E-4 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS26920 e342dde1428e282038613fd1098f0d8b 294 Pfam PF01926 50S ribosome-binding GTPase 41 141 1.7E-13 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 RG43_RS18850 0716002e1951c2c2400be1af5dd06537 109 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 20 92 4.7E-19 T 09-03-2017 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 RG43_RS18850 0716002e1951c2c2400be1af5dd06537 109 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 12 107 4.5E-38 T 09-03-2017 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 RG43_RS13695 f488eeac3ec8ad6f53792c1642e56b93 342 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 46 289 4.5E-17 T 09-03-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RG43_RS13695 f488eeac3ec8ad6f53792c1642e56b93 342 SUPERFAMILY SSF111369 184 274 4.58E-12 T 09-03-2017 RG43_RS13695 f488eeac3ec8ad6f53792c1642e56b93 342 Gene3D G3DSA:2.40.50.100 47 79 4.8E-17 T 09-03-2017 RG43_RS13695 f488eeac3ec8ad6f53792c1642e56b93 342 Gene3D G3DSA:2.40.50.100 210 243 4.8E-17 T 09-03-2017 RG43_RS13695 f488eeac3ec8ad6f53792c1642e56b93 342 Pfam PF00529 HlyD membrane-fusion protein of T1SS 21 340 3.9E-8 T 09-03-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RG43_RS13695 f488eeac3ec8ad6f53792c1642e56b93 342 SUPERFAMILY SSF111369 46 101 1.11E-8 T 09-03-2017 RG43_RS13695 f488eeac3ec8ad6f53792c1642e56b93 342 SUPERFAMILY SSF111369 137 170 1.11E-8 T 09-03-2017 RG43_RS18610 19579ce40a7e689d7eafceb415f215e8 214 Gene3D G3DSA:3.40.50.300 1 212 6.3E-83 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS18610 19579ce40a7e689d7eafceb415f215e8 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 1.5E-15 T 09-03-2017 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219 RG43_RS18610 19579ce40a7e689d7eafceb415f215e8 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 09-03-2017 RG43_RS18610 19579ce40a7e689d7eafceb415f215e8 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 1.5E-76 T 09-03-2017 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219 RG43_RS18610 19579ce40a7e689d7eafceb415f215e8 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 54.234 T 09-03-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 RG43_RS18610 19579ce40a7e689d7eafceb415f215e8 214 SUPERFAMILY SSF52540 1 213 4.91E-46 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS18610 19579ce40a7e689d7eafceb415f215e8 214 Pfam PF00406 Adenylate kinase 5 186 6.8E-61 T 09-03-2017 RG43_RS18610 19579ce40a7e689d7eafceb415f215e8 214 PRINTS PR00094 Adenylate kinase signature 81 97 6.7E-36 T 09-03-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 RG43_RS18610 19579ce40a7e689d7eafceb415f215e8 214 PRINTS PR00094 Adenylate kinase signature 4 17 6.7E-36 T 09-03-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 RG43_RS18610 19579ce40a7e689d7eafceb415f215e8 214 PRINTS PR00094 Adenylate kinase signature 32 46 6.7E-36 T 09-03-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 RG43_RS18610 19579ce40a7e689d7eafceb415f215e8 214 PRINTS PR00094 Adenylate kinase signature 156 171 6.7E-36 T 09-03-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 RG43_RS18610 19579ce40a7e689d7eafceb415f215e8 214 PRINTS PR00094 Adenylate kinase signature 173 187 6.7E-36 T 09-03-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 RG43_RS09705 72ebb58fb0780a913da5da09ace7c1d1 267 Gene3D G3DSA:3.90.550.10 7 239 4.3E-55 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS09705 72ebb58fb0780a913da5da09ace7c1d1 267 Pfam PF00535 Glycosyl transferase family 2 9 125 7.4E-36 T 09-03-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RG43_RS09705 72ebb58fb0780a913da5da09ace7c1d1 267 SUPERFAMILY SSF53448 7 228 1.31E-56 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS11395 641701ca2a971165e2b7e15b2a9cbea7 113 Pfam PF10709 Protein of unknown function (DUF2511) 26 113 3.4E-44 T 09-03-2017 IPR019648 Protein of unknown function DUF2511 RG43_RS24850 0c58443f77902b98b48e0f00950dd321 251 SUPERFAMILY SSF53335 18 249 6.97E-53 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS24850 0c58443f77902b98b48e0f00950dd321 251 Pfam PF01209 ubiE/COQ5 methyltransferase family 15 250 1.5E-113 T 09-03-2017 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 RG43_RS24850 0c58443f77902b98b48e0f00950dd321 251 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 16 250 39.615 T 09-03-2017 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 RG43_RS24850 0c58443f77902b98b48e0f00950dd321 251 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 36 51 - T 09-03-2017 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 RG43_RS24850 0c58443f77902b98b48e0f00950dd321 251 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 25 250 1.6E-89 T 09-03-2017 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 RG43_RS24850 0c58443f77902b98b48e0f00950dd321 251 Gene3D G3DSA:3.40.50.150 23 247 2.8E-60 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS24850 0c58443f77902b98b48e0f00950dd321 251 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 158 172 - T 09-03-2017 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 RG43_RS24205 331854e635e5382ff3e0d82bc1096262 387 SUPERFAMILY SSF69279 15 186 2.72E-26 T 09-03-2017 RG43_RS24205 331854e635e5382ff3e0d82bc1096262 387 Pfam PF05954 Phage late control gene D protein (GPD) 44 364 9.4E-46 T 09-03-2017 RG43_RS03300 b334ecbd9cf0b39ca4c7607af0d66be7 157 Pfam PF03830 PTS system sorbose subfamily IIB component 4 149 2.0E-50 T 09-03-2017 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 RG43_RS03300 b334ecbd9cf0b39ca4c7607af0d66be7 157 SUPERFAMILY SSF52728 3 156 2.75E-51 T 09-03-2017 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 RG43_RS03300 b334ecbd9cf0b39ca4c7607af0d66be7 157 Gene3D G3DSA:3.40.35.10 3 157 5.6E-58 T 09-03-2017 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 RG43_RS03300 b334ecbd9cf0b39ca4c7607af0d66be7 157 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 3 152 1.6E-73 T 09-03-2017 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 RG43_RS05620 10265a8932b7f94d9d3cdd29229df1d6 443 Gene3D G3DSA:3.40.630.30 294 440 2.5E-40 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS05620 10265a8932b7f94d9d3cdd29229df1d6 443 Pfam PF00583 Acetyltransferase (GNAT) family 342 414 2.4E-7 T 09-03-2017 IPR000182 GNAT domain GO:0008080 RG43_RS05620 10265a8932b7f94d9d3cdd29229df1d6 443 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 9 442 2.2E-197 T 09-03-2017 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 RG43_RS05620 10265a8932b7f94d9d3cdd29229df1d6 443 SUPERFAMILY SSF55729 256 418 2.27E-18 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS05620 10265a8932b7f94d9d3cdd29229df1d6 443 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 442 234.82 T 09-03-2017 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 RG43_RS05620 10265a8932b7f94d9d3cdd29229df1d6 443 Gene3D G3DSA:3.40.1160.10 24 291 6.1E-70 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase RG43_RS05620 10265a8932b7f94d9d3cdd29229df1d6 443 PIRSF PIRSF000423 1 442 6.1E-210 T 09-03-2017 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 RG43_RS05620 10265a8932b7f94d9d3cdd29229df1d6 443 Pfam PF00696 Amino acid kinase family 26 268 3.3E-33 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase RG43_RS05620 10265a8932b7f94d9d3cdd29229df1d6 443 SUPERFAMILY SSF53633 6 291 3.07E-70 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase RG43_RS04670 11a14165b9f48e49cb97408b9e6b17f1 271 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 7 22 - T 09-03-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RG43_RS04670 11a14165b9f48e49cb97408b9e6b17f1 271 Gene3D G3DSA:3.20.20.20 4 266 8.4E-77 T 09-03-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RG43_RS04670 11a14165b9f48e49cb97408b9e6b17f1 271 Pfam PF00809 Pterin binding enzyme 8 249 3.5E-71 T 09-03-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RG43_RS04670 11a14165b9f48e49cb97408b9e6b17f1 271 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 7 263 7.8E-75 T 09-03-2017 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 RG43_RS04670 11a14165b9f48e49cb97408b9e6b17f1 271 SUPERFAMILY SSF51717 3 266 2.22E-72 T 09-03-2017 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RG43_RS04670 11a14165b9f48e49cb97408b9e6b17f1 271 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 41 54 - T 09-03-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RG43_RS26880 1348fcd64051ef60445d0527ebe0824f 158 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 107 112 - T 09-03-2017 IPR020891 Uncharacterised protein family UPF0758, conserved site RG43_RS26880 1348fcd64051ef60445d0527ebe0824f 158 Gene3D G3DSA:3.40.140.10 36 158 1.2E-50 T 09-03-2017 RG43_RS26880 1348fcd64051ef60445d0527ebe0824f 158 TIGRFAM TIGR00608 radc: DNA repair protein RadC 36 158 4.0E-44 T 09-03-2017 IPR001405 RadC protein RG43_RS26880 1348fcd64051ef60445d0527ebe0824f 158 Pfam PF04002 RadC-like JAB domain 38 157 6.0E-44 T 09-03-2017 IPR025657 RadC-like JAB domain RG43_RS26880 1348fcd64051ef60445d0527ebe0824f 158 SUPERFAMILY SSF102712 83 124 7.19E-5 T 09-03-2017 RG43_RS25920 1348fcd64051ef60445d0527ebe0824f 158 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 107 112 - T 09-03-2017 IPR020891 Uncharacterised protein family UPF0758, conserved site RG43_RS25920 1348fcd64051ef60445d0527ebe0824f 158 Gene3D G3DSA:3.40.140.10 36 158 1.2E-50 T 09-03-2017 RG43_RS25920 1348fcd64051ef60445d0527ebe0824f 158 TIGRFAM TIGR00608 radc: DNA repair protein RadC 36 158 4.0E-44 T 09-03-2017 IPR001405 RadC protein RG43_RS25920 1348fcd64051ef60445d0527ebe0824f 158 Pfam PF04002 RadC-like JAB domain 38 157 6.0E-44 T 09-03-2017 IPR025657 RadC-like JAB domain RG43_RS25920 1348fcd64051ef60445d0527ebe0824f 158 SUPERFAMILY SSF102712 83 124 7.19E-5 T 09-03-2017 RG43_RS06275 3eac3c2263398f6d02c5588500b228f2 569 SUPERFAMILY SSF143243 9 194 1.57E-47 T 09-03-2017 RG43_RS06275 3eac3c2263398f6d02c5588500b228f2 569 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 216 227 - T 09-03-2017 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS06275 3eac3c2263398f6d02c5588500b228f2 569 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 36 152 3.8E-25 T 09-03-2017 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS06275 3eac3c2263398f6d02c5588500b228f2 569 Pfam PF00374 Nickel-dependent hydrogenase 218 286 2.4E-13 T 09-03-2017 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 RG43_RS06275 3eac3c2263398f6d02c5588500b228f2 569 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 296 464 1.2E-34 T 09-03-2017 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS06275 3eac3c2263398f6d02c5588500b228f2 569 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 466 537 5.0E-11 T 09-03-2017 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS06275 3eac3c2263398f6d02c5588500b228f2 569 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 87 141 5.0E-25 T 09-03-2017 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS06275 3eac3c2263398f6d02c5588500b228f2 569 SUPERFAMILY SSF56762 193 537 4.45E-109 T 09-03-2017 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS06275 3eac3c2263398f6d02c5588500b228f2 569 Gene3D G3DSA:1.10.645.10 166 536 5.3E-88 T 09-03-2017 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS05410 1f71bd628b1094941a35fcc94fe24213 310 SUPERFAMILY SSF53633 3 308 9.56E-84 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase RG43_RS05410 1f71bd628b1094941a35fcc94fe24213 310 Gene3D G3DSA:3.40.1160.10 2 308 1.3E-108 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase RG43_RS05410 1f71bd628b1094941a35fcc94fe24213 310 Pfam PF00696 Amino acid kinase family 3 288 7.6E-30 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase RG43_RS05410 1f71bd628b1094941a35fcc94fe24213 310 PIRSF PIRSF000723 1 310 1.0E-122 T 09-03-2017 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 RG43_RS05410 1f71bd628b1094941a35fcc94fe24213 310 PRINTS PR01469 Bacterial carbamate kinase signature 264 279 1.4E-65 T 09-03-2017 RG43_RS05410 1f71bd628b1094941a35fcc94fe24213 310 PRINTS PR01469 Bacterial carbamate kinase signature 179 197 1.4E-65 T 09-03-2017 RG43_RS05410 1f71bd628b1094941a35fcc94fe24213 310 PRINTS PR01469 Bacterial carbamate kinase signature 73 91 1.4E-65 T 09-03-2017 RG43_RS05410 1f71bd628b1094941a35fcc94fe24213 310 PRINTS PR01469 Bacterial carbamate kinase signature 108 127 1.4E-65 T 09-03-2017 RG43_RS05410 1f71bd628b1094941a35fcc94fe24213 310 PRINTS PR01469 Bacterial carbamate kinase signature 156 175 1.4E-65 T 09-03-2017 RG43_RS05410 1f71bd628b1094941a35fcc94fe24213 310 PRINTS PR01469 Bacterial carbamate kinase signature 39 58 1.4E-65 T 09-03-2017 RG43_RS05410 1f71bd628b1094941a35fcc94fe24213 310 PRINTS PR01469 Bacterial carbamate kinase signature 209 224 1.4E-65 T 09-03-2017 RG43_RS05410 1f71bd628b1094941a35fcc94fe24213 310 TIGRFAM TIGR00746 arcC: carbamate kinase 3 309 3.7E-116 T 09-03-2017 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 RG43_RS20435 4c991d24375147672387b8f55871976f 452 SMART SM00257 342 385 1.4E-16 T 09-03-2017 IPR018392 LysM domain RG43_RS20435 4c991d24375147672387b8f55871976f 452 SMART SM00257 401 443 4.6E-13 T 09-03-2017 IPR018392 LysM domain RG43_RS20435 4c991d24375147672387b8f55871976f 452 SUPERFAMILY SSF54106 341 384 9.29E-12 T 09-03-2017 IPR018392 LysM domain RG43_RS20435 4c991d24375147672387b8f55871976f 452 SUPERFAMILY SSF53955 99 249 1.13E-41 T 09-03-2017 IPR023346 Lysozyme-like domain RG43_RS20435 4c991d24375147672387b8f55871976f 452 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 121 149 - T 09-03-2017 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 RG43_RS20435 4c991d24375147672387b8f55871976f 452 Gene3D G3DSA:1.10.530.10 97 257 2.1E-47 T 09-03-2017 RG43_RS20435 4c991d24375147672387b8f55871976f 452 SUPERFAMILY SSF54106 400 443 2.49E-10 T 09-03-2017 IPR018392 LysM domain RG43_RS20435 4c991d24375147672387b8f55871976f 452 Pfam PF01464 Transglycosylase SLT domain 102 216 1.1E-29 T 09-03-2017 IPR008258 Transglycosylase SLT domain 1 RG43_RS20435 4c991d24375147672387b8f55871976f 452 Gene3D G3DSA:3.10.350.10 399 443 1.2E-17 T 09-03-2017 IPR018392 LysM domain RG43_RS20435 4c991d24375147672387b8f55871976f 452 Gene3D G3DSA:3.10.350.10 340 384 9.9E-20 T 09-03-2017 IPR018392 LysM domain RG43_RS20435 4c991d24375147672387b8f55871976f 452 Pfam PF01476 LysM domain 343 384 2.2E-14 T 09-03-2017 IPR018392 LysM domain RG43_RS20435 4c991d24375147672387b8f55871976f 452 Pfam PF01476 LysM domain 402 441 1.1E-9 T 09-03-2017 IPR018392 LysM domain RG43_RS19465 973d3ee93a355a655dffba70c4603305 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 1.8E-14 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RG43_RS19465 973d3ee93a355a655dffba70c4603305 195 SUPERFAMILY SSF46689 6 79 3.75E-17 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS19465 973d3ee93a355a655dffba70c4603305 195 SUPERFAMILY SSF48498 87 190 8.12E-16 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RG43_RS19465 973d3ee93a355a655dffba70c4603305 195 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 2 192 1.4E-78 T 09-03-2017 IPR017757 Transcriptional repressor BetI RG43_RS19465 973d3ee93a355a655dffba70c4603305 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 2.3E-6 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RG43_RS19465 973d3ee93a355a655dffba70c4603305 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 2.3E-6 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RG43_RS19465 973d3ee93a355a655dffba70c4603305 195 Gene3D G3DSA:1.10.357.10 1 191 1.1E-43 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RG43_RS19465 973d3ee93a355a655dffba70c4603305 195 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 195 101.642 T 09-03-2017 IPR017757 Transcriptional repressor BetI RG43_RS19465 973d3ee93a355a655dffba70c4603305 195 Pfam PF13977 Bacterial transcriptional repressor 87 192 6.9E-28 T 09-03-2017 RG43_RS19465 973d3ee93a355a655dffba70c4603305 195 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 09-03-2017 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RG43_RS21135 526d26ccf42f95d6dbe58659d0dea996 152 Pfam PF02381 MraZ protein, putative antitoxin-like 1 75 3.7E-25 T 09-03-2017 IPR020603 MraZ domain RG43_RS21135 526d26ccf42f95d6dbe58659d0dea996 152 Pfam PF02381 MraZ protein, putative antitoxin-like 77 135 2.7E-21 T 09-03-2017 IPR020603 MraZ domain RG43_RS21135 526d26ccf42f95d6dbe58659d0dea996 152 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 152 6.2E-68 T 09-03-2017 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 RG43_RS21135 526d26ccf42f95d6dbe58659d0dea996 152 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 152 58.628 T 09-03-2017 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 RG43_RS21135 526d26ccf42f95d6dbe58659d0dea996 152 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 139 3.0E-78 T 09-03-2017 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 RG43_RS21135 526d26ccf42f95d6dbe58659d0dea996 152 SUPERFAMILY SSF89447 1 135 3.98E-46 T 09-03-2017 RG43_RS18025 748d52993d22c6d511ea00ba6aadc19f 487 Pfam PF00939 Sodium:sulfate symporter transmembrane region 6 486 6.2E-186 T 09-03-2017 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 RG43_RS18025 748d52993d22c6d511ea00ba6aadc19f 487 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 25 480 9.4E-173 T 09-03-2017 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 RG43_RS18025 748d52993d22c6d511ea00ba6aadc19f 487 PIRSF PIRSF002457 1 487 6.4E-163 T 09-03-2017 IPR030676 Citrate carrier CitT-related RG43_RS14650 48835af5c3e5c8f2b7aba321dfbe6aff 239 Gene3D G3DSA:1.10.10.10 8 76 3.2E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS14650 48835af5c3e5c8f2b7aba321dfbe6aff 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 2.7E-9 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS14650 48835af5c3e5c8f2b7aba321dfbe6aff 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 2.7E-9 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS14650 48835af5c3e5c8f2b7aba321dfbe6aff 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 5.6E-20 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS14650 48835af5c3e5c8f2b7aba321dfbe6aff 239 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 239 162.307 T 09-03-2017 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 RG43_RS14650 48835af5c3e5c8f2b7aba321dfbe6aff 239 SUPERFAMILY SSF46785 11 88 2.48E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS14650 48835af5c3e5c8f2b7aba321dfbe6aff 239 SUPERFAMILY SSF48008 79 230 5.75E-65 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal RG43_RS14650 48835af5c3e5c8f2b7aba321dfbe6aff 239 Gene3D G3DSA:1.20.120.530 80 236 8.9E-69 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal RG43_RS14650 48835af5c3e5c8f2b7aba321dfbe6aff 239 Pfam PF07840 FadR C-terminal domain 72 234 5.1E-73 T 09-03-2017 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 RG43_RS14650 48835af5c3e5c8f2b7aba321dfbe6aff 239 SMART SM00345 12 71 5.9E-23 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS14650 48835af5c3e5c8f2b7aba321dfbe6aff 239 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 235 1.1E-123 T 09-03-2017 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 RG43_RS10830 3c400d7ad93ee4d7b70b03e9054b098c 471 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 106 7.9E-23 T 09-03-2017 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 RG43_RS10830 3c400d7ad93ee4d7b70b03e9054b098c 471 Pfam PF07196 Flagellin hook IN motif 128 184 1.1E-12 T 09-03-2017 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 RG43_RS10830 3c400d7ad93ee4d7b70b03e9054b098c 471 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 224 454 9.2E-58 T 09-03-2017 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 RG43_RS07625 9237d89fa572f80ebe4005a7cba902d5 303 SUPERFAMILY SSF53686 4 289 3.93E-92 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RG43_RS07625 9237d89fa572f80ebe4005a7cba902d5 303 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 5 281 3.6E-68 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RG43_RS07625 9237d89fa572f80ebe4005a7cba902d5 303 TIGRFAM TIGR01138 cysM: cysteine synthase B 3 292 6.6E-169 T 09-03-2017 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 RG43_RS07625 9237d89fa572f80ebe4005a7cba902d5 303 Gene3D G3DSA:3.40.50.1100 40 139 5.0E-39 T 09-03-2017 RG43_RS07625 9237d89fa572f80ebe4005a7cba902d5 303 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 30 48 - T 09-03-2017 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 RG43_RS07625 9237d89fa572f80ebe4005a7cba902d5 303 TIGRFAM TIGR01136 cysKM: cysteine synthase 5 292 1.9E-126 T 09-03-2017 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 RG43_RS07625 9237d89fa572f80ebe4005a7cba902d5 303 Gene3D G3DSA:3.40.50.1100 146 297 1.1E-80 T 09-03-2017 RG43_RS07625 9237d89fa572f80ebe4005a7cba902d5 303 Gene3D G3DSA:3.40.50.1100 2 39 1.1E-80 T 09-03-2017 RG43_RS05720 acb827905f431d380d88c14a6027ce16 163 Pfam PF05638 Type VI secretion system effector, Hcp 6 146 1.9E-37 T 09-03-2017 IPR008514 Type VI secretion system effector, Hcp RG43_RS05720 acb827905f431d380d88c14a6027ce16 163 Gene3D G3DSA:2.30.110.20 1 159 2.7E-35 T 09-03-2017 IPR008514 Type VI secretion system effector, Hcp RG43_RS05720 acb827905f431d380d88c14a6027ce16 163 SUPERFAMILY SSF141452 2 160 1.96E-45 T 09-03-2017 IPR008514 Type VI secretion system effector, Hcp RG43_RS05720 acb827905f431d380d88c14a6027ce16 163 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 160 2.7E-51 T 09-03-2017 IPR008514 Type VI secretion system effector, Hcp RG43_RS05580 e40d3ff02ef554659c29b9d5b5939339 156 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS05580 e40d3ff02ef554659c29b9d5b5939339 156 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 1 24 2.2E-7 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS05580 e40d3ff02ef554659c29b9d5b5939339 156 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 7.2E-6 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS05580 e40d3ff02ef554659c29b9d5b5939339 156 SUPERFAMILY SSF54523 8 133 5.89E-7 T 09-03-2017 RG43_RS06555 3ab1e503e3e953ea6b91720eb832faaf 52 ProSitePatterns PS01309 Uncharacterized protein family UPF0057 signature. 7 22 - T 09-03-2017 IPR000612 Proteolipid membrane potential modulator GO:0016021 RG43_RS06555 3ab1e503e3e953ea6b91720eb832faaf 52 Pfam PF01679 Proteolipid membrane potential modulator 3 48 1.6E-18 T 09-03-2017 IPR000612 Proteolipid membrane potential modulator GO:0016021 RG43_RS02690 41dd90eee557d2a8128cce90ddaca9a8 449 SUPERFAMILY SSF56059 83 347 1.18E-68 T 09-03-2017 RG43_RS02690 41dd90eee557d2a8128cce90ddaca9a8 449 Gene3D G3DSA:3.30.470.20 204 444 2.8E-100 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RG43_RS02690 41dd90eee557d2a8128cce90ddaca9a8 449 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 447 4.1E-252 T 09-03-2017 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 RG43_RS02690 41dd90eee557d2a8128cce90ddaca9a8 449 SUPERFAMILY SSF52440 1 113 1.22E-46 T 09-03-2017 IPR016185 Pre-ATP-grasp domain RG43_RS02690 41dd90eee557d2a8128cce90ddaca9a8 449 SUPERFAMILY SSF51246 331 444 6.28E-44 T 09-03-2017 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RG43_RS02690 41dd90eee557d2a8128cce90ddaca9a8 449 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 09-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RG43_RS02690 41dd90eee557d2a8128cce90ddaca9a8 449 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 5.1E-44 T 09-03-2017 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RG43_RS02690 41dd90eee557d2a8128cce90ddaca9a8 449 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 6.6E-38 T 09-03-2017 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RG43_RS02690 41dd90eee557d2a8128cce90ddaca9a8 449 SMART SM00878 336 441 4.2E-65 T 09-03-2017 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RG43_RS02690 41dd90eee557d2a8128cce90ddaca9a8 449 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 09-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RG43_RS02690 41dd90eee557d2a8128cce90ddaca9a8 449 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 323 2.1E-86 T 09-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RG43_RS02690 41dd90eee557d2a8128cce90ddaca9a8 449 Gene3D G3DSA:3.30.1490.20 130 203 7.8E-30 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RG43_RS02690 41dd90eee557d2a8128cce90ddaca9a8 449 Gene3D G3DSA:3.40.50.20 1 129 9.4E-51 T 09-03-2017 IPR016185 Pre-ATP-grasp domain RG43_RS22870 02941121650ae932284df147d57c572b 565 SUPERFAMILY SSF74863 27 141 6.15E-42 T 09-03-2017 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain RG43_RS22870 02941121650ae932284df147d57c572b 565 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 171 376 1.5E-18 T 09-03-2017 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 RG43_RS22870 02941121650ae932284df147d57c572b 565 Pfam PF13899 Thioredoxin-like 462 536 2.1E-12 T 09-03-2017 RG43_RS22870 02941121650ae932284df147d57c572b 565 SUPERFAMILY SSF52833 444 561 2.25E-24 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS22870 02941121650ae932284df147d57c572b 565 Gene3D G3DSA:3.40.30.10 452 561 5.4E-37 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS22870 02941121650ae932284df147d57c572b 565 ProSitePatterns PS00194 Thioredoxin family active site. 472 490 - T 09-03-2017 IPR017937 Thioredoxin, conserved site GO:0045454 RG43_RS22870 02941121650ae932284df147d57c572b 565 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 564 40.67 T 09-03-2017 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 RG43_RS22870 02941121650ae932284df147d57c572b 565 Pfam PF11412 Disulphide bond corrector protein DsbC 28 138 9.4E-36 T 09-03-2017 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain RG43_RS22870 02941121650ae932284df147d57c572b 565 Gene3D G3DSA:2.60.40.1250 24 142 1.0E-47 T 09-03-2017 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain RG43_RS12420 b3c49e06c785ede9b8fccc3923ab5654 173 Gene3D G3DSA:2.60.40.200 23 173 8.0E-46 T 09-03-2017 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 RG43_RS12420 b3c49e06c785ede9b8fccc3923ab5654 173 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 34 172 1.6E-30 T 09-03-2017 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 RG43_RS12420 b3c49e06c785ede9b8fccc3923ab5654 173 SUPERFAMILY SSF49329 23 173 4.32E-46 T 09-03-2017 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 RG43_RS12420 b3c49e06c785ede9b8fccc3923ab5654 173 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 161 172 - T 09-03-2017 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 RG43_RS03110 28747e1f7b03d688e1e142c0e13a7a19 152 SUPERFAMILY SSF74942 85 152 3.53E-17 T 09-03-2017 IPR028998 Ribosome maturation factor RimP, C-terminal RG43_RS03110 28747e1f7b03d688e1e142c0e13a7a19 152 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 8 152 24.786 T 09-03-2017 IPR003728 Ribosome maturation factor RimP GO:0042274 RG43_RS03110 28747e1f7b03d688e1e142c0e13a7a19 152 Pfam PF02576 Putative ribosome maturation factor RimP 14 148 7.1E-49 T 09-03-2017 IPR003728 Ribosome maturation factor RimP GO:0042274 RG43_RS03110 28747e1f7b03d688e1e142c0e13a7a19 152 Gene3D G3DSA:2.30.30.180 89 149 1.4E-13 T 09-03-2017 IPR028998 Ribosome maturation factor RimP, C-terminal RG43_RS03110 28747e1f7b03d688e1e142c0e13a7a19 152 Gene3D G3DSA:3.30.300.70 4 81 2.2E-33 T 09-03-2017 IPR028989 Ribosome maturation factor RimP, N-terminal RG43_RS03110 28747e1f7b03d688e1e142c0e13a7a19 152 SUPERFAMILY SSF75420 4 84 3.53E-25 T 09-03-2017 IPR028989 Ribosome maturation factor RimP, N-terminal RG43_RS08305 957393d58ba08f00c4dc8206d69808a0 151 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 9 151 36.961 T 09-03-2017 IPR007334 Uncharacterised protein family UPF0208 RG43_RS08305 957393d58ba08f00c4dc8206d69808a0 151 Pfam PF04217 Protein of unknown function, DUF412 11 149 2.6E-57 T 09-03-2017 IPR007334 Uncharacterised protein family UPF0208 RG43_RS12345 79ef566e49f6c5a54c844bdbcc62fbf8 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 6.3E-20 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS12345 79ef566e49f6c5a54c844bdbcc62fbf8 310 SUPERFAMILY SSF53850 88 290 2.35E-27 T 09-03-2017 RG43_RS12345 79ef566e49f6c5a54c844bdbcc62fbf8 310 Gene3D G3DSA:1.10.10.10 6 88 2.8E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS12345 79ef566e49f6c5a54c844bdbcc62fbf8 310 SUPERFAMILY SSF46785 6 88 2.18E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS12345 79ef566e49f6c5a54c844bdbcc62fbf8 310 Pfam PF03466 LysR substrate binding domain 88 290 1.6E-25 T 09-03-2017 IPR005119 LysR, substrate-binding RG43_RS12345 79ef566e49f6c5a54c844bdbcc62fbf8 310 Gene3D G3DSA:3.40.190.10 89 173 1.0E-7 T 09-03-2017 RG43_RS12345 79ef566e49f6c5a54c844bdbcc62fbf8 310 Gene3D G3DSA:3.40.190.10 174 257 1.1E-4 T 09-03-2017 RG43_RS26815 d6c77f73922e4c966983531609d95373 151 Pfam PF08334 Type II secretion system (T2SS), protein G 36 145 2.3E-42 T 09-03-2017 IPR013545 Type II secretion system protein G RG43_RS26815 d6c77f73922e4c966983531609d95373 151 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 9 32 3.5E-8 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS26815 d6c77f73922e4c966983531609d95373 151 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 12 32 - T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS26815 d6c77f73922e4c966983531609d95373 151 SUPERFAMILY SSF54523 39 146 7.85E-40 T 09-03-2017 RG43_RS26815 d6c77f73922e4c966983531609d95373 151 PRINTS PR00813 Bacterial general secretion pathway protein G signature 49 67 3.5E-22 T 09-03-2017 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 RG43_RS26815 d6c77f73922e4c966983531609d95373 151 PRINTS PR00813 Bacterial general secretion pathway protein G signature 13 38 3.5E-22 T 09-03-2017 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 RG43_RS26815 d6c77f73922e4c966983531609d95373 151 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 13 146 1.1E-57 T 09-03-2017 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 RG43_RS26815 d6c77f73922e4c966983531609d95373 151 Gene3D G3DSA:3.30.700.10 14 79 6.6E-9 T 09-03-2017 RG43_RS26815 d6c77f73922e4c966983531609d95373 151 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 33 2.4E-8 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS04440 d6c77f73922e4c966983531609d95373 151 Pfam PF08334 Type II secretion system (T2SS), protein G 36 145 2.3E-42 T 09-03-2017 IPR013545 Type II secretion system protein G RG43_RS04440 d6c77f73922e4c966983531609d95373 151 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 9 32 3.5E-8 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS04440 d6c77f73922e4c966983531609d95373 151 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 12 32 - T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS04440 d6c77f73922e4c966983531609d95373 151 SUPERFAMILY SSF54523 39 146 7.85E-40 T 09-03-2017 RG43_RS04440 d6c77f73922e4c966983531609d95373 151 PRINTS PR00813 Bacterial general secretion pathway protein G signature 49 67 3.5E-22 T 09-03-2017 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 RG43_RS04440 d6c77f73922e4c966983531609d95373 151 PRINTS PR00813 Bacterial general secretion pathway protein G signature 13 38 3.5E-22 T 09-03-2017 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 RG43_RS04440 d6c77f73922e4c966983531609d95373 151 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 13 146 1.1E-57 T 09-03-2017 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 RG43_RS04440 d6c77f73922e4c966983531609d95373 151 Gene3D G3DSA:3.30.700.10 14 79 6.6E-9 T 09-03-2017 RG43_RS04440 d6c77f73922e4c966983531609d95373 151 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 33 2.4E-8 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS22075 96528655c1e00e4ef29568bb98a65580 198 SUPERFAMILY SSF56349 4 184 6.18E-43 T 09-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RG43_RS22075 96528655c1e00e4ef29568bb98a65580 198 Gene3D G3DSA:1.10.443.10 5 174 9.7E-39 T 09-03-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RG43_RS22075 96528655c1e00e4ef29568bb98a65580 198 Pfam PF00589 Phage integrase family 6 176 3.8E-50 T 09-03-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RG43_RS02830 7e83a2f8447b1a959eb026f7a47d4917 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 09-03-2017 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 RG43_RS02830 7e83a2f8447b1a959eb026f7a47d4917 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 6.8E-48 T 09-03-2017 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 RG43_RS02830 7e83a2f8447b1a959eb026f7a47d4917 130 Gene3D G3DSA:3.30.230.10 4 130 3.5E-51 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RG43_RS02830 7e83a2f8447b1a959eb026f7a47d4917 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 34.138 T 09-03-2017 IPR023035 Ribosomal protein S9, bacterial/plastid RG43_RS02830 7e83a2f8447b1a959eb026f7a47d4917 130 SUPERFAMILY SSF54211 5 130 1.59E-49 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold RG43_RS22225 db9d4fc2aa9fc7db2b76deb2620d93b5 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 5.9E-9 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS22225 db9d4fc2aa9fc7db2b76deb2620d93b5 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 5.9E-9 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS22225 db9d4fc2aa9fc7db2b76deb2620d93b5 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 5.9E-9 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS22225 db9d4fc2aa9fc7db2b76deb2620d93b5 237 Gene3D G3DSA:3.40.50.720 2 234 1.8E-63 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS22225 db9d4fc2aa9fc7db2b76deb2620d93b5 237 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RG43_RS22225 db9d4fc2aa9fc7db2b76deb2620d93b5 237 SUPERFAMILY SSF51735 6 234 8.63E-64 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS22225 db9d4fc2aa9fc7db2b76deb2620d93b5 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 4.5E-35 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS22225 db9d4fc2aa9fc7db2b76deb2620d93b5 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 199 219 4.5E-35 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS22225 db9d4fc2aa9fc7db2b76deb2620d93b5 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 4.5E-35 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS22225 db9d4fc2aa9fc7db2b76deb2620d93b5 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.5E-35 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS22225 db9d4fc2aa9fc7db2b76deb2620d93b5 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 4.5E-35 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS22225 db9d4fc2aa9fc7db2b76deb2620d93b5 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 4.5E-35 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS22225 db9d4fc2aa9fc7db2b76deb2620d93b5 237 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 233 1.8E-51 T 09-03-2017 RG43_RS22225 db9d4fc2aa9fc7db2b76deb2620d93b5 237 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 182 0.0031 T 09-03-2017 RG43_RS23665 d5665ba0fadead44e40c1cd516518044 429 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 4.9E-84 T 09-03-2017 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 RG43_RS23665 d5665ba0fadead44e40c1cd516518044 429 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 424 44.171 T 09-03-2017 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 RG43_RS23665 d5665ba0fadead44e40c1cd516518044 429 Gene3D G3DSA:3.30.470.20 191 328 4.1E-65 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RG43_RS23665 d5665ba0fadead44e40c1cd516518044 429 SMART SM01209 103 296 7.3E-143 T 09-03-2017 RG43_RS23665 d5665ba0fadead44e40c1cd516518044 429 SUPERFAMILY SSF56059 104 325 8.49E-70 T 09-03-2017 RG43_RS23665 d5665ba0fadead44e40c1cd516518044 429 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 425 7.7E-191 T 09-03-2017 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 RG43_RS23665 d5665ba0fadead44e40c1cd516518044 429 SUPERFAMILY SSF51246 329 424 1.57E-33 T 09-03-2017 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RG43_RS23665 d5665ba0fadead44e40c1cd516518044 429 SUPERFAMILY SSF52440 1 103 1.29E-37 T 09-03-2017 IPR016185 Pre-ATP-grasp domain RG43_RS23665 d5665ba0fadead44e40c1cd516518044 429 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 09-03-2017 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 RG43_RS23665 d5665ba0fadead44e40c1cd516518044 429 SMART SM01210 330 424 3.9E-57 T 09-03-2017 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 RG43_RS23665 d5665ba0fadead44e40c1cd516518044 429 Gene3D G3DSA:3.40.50.20 2 95 1.2E-38 T 09-03-2017 IPR016185 Pre-ATP-grasp domain RG43_RS23665 d5665ba0fadead44e40c1cd516518044 429 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 2.2E-36 T 09-03-2017 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 RG43_RS23665 d5665ba0fadead44e40c1cd516518044 429 Gene3D G3DSA:3.90.600.10 330 424 1.5E-36 T 09-03-2017 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 RG43_RS23665 d5665ba0fadead44e40c1cd516518044 429 Gene3D G3DSA:3.30.1490.20 121 190 8.7E-34 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RG43_RS23665 d5665ba0fadead44e40c1cd516518044 429 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 422 5.0E-30 T 09-03-2017 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 RG43_RS16300 6f65b873aee10d6d95ae915a5a527fdb 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 6 86 2.8E-12 T 09-03-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RG43_RS16300 6f65b873aee10d6d95ae915a5a527fdb 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 25 230 1.1E-15 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS16300 6f65b873aee10d6d95ae915a5a527fdb 238 SUPERFAMILY SSF161098 8 216 4.97E-37 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS16300 6f65b873aee10d6d95ae915a5a527fdb 238 Gene3D G3DSA:1.10.3720.10 6 227 5.8E-41 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS15615 2df410ecddb18f030131cbbb0250dd2c 914 PIRSF PIRSF036437 1 914 0.0 T 09-03-2017 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 RG43_RS15615 2df410ecddb18f030131cbbb0250dd2c 914 Gene3D G3DSA:1.10.287.130 436 503 4.9E-16 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS15615 2df410ecddb18f030131cbbb0250dd2c 914 TIGRFAM TIGR02956 TMAO_torS: TMAO reductase sytem sensor TorS 5 805 7.4E-271 T 09-03-2017 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 RG43_RS15615 2df410ecddb18f030131cbbb0250dd2c 914 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 557 662 2.6E-25 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS15615 2df410ecddb18f030131cbbb0250dd2c 914 SUPERFAMILY SSF47226 804 908 2.62E-18 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RG43_RS15615 2df410ecddb18f030131cbbb0250dd2c 914 Gene3D G3DSA:3.40.50.2300 681 817 2.2E-24 T 09-03-2017 RG43_RS15615 2df410ecddb18f030131cbbb0250dd2c 914 SMART SM00304 354 407 6.4E-5 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RG43_RS15615 2df410ecddb18f030131cbbb0250dd2c 914 SUPERFAMILY SSF47384 426 508 1.96E-19 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS15615 2df410ecddb18f030131cbbb0250dd2c 914 PRINTS PR00344 Bacterial sensor protein C-terminal signature 611 621 3.1E-12 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS15615 2df410ecddb18f030131cbbb0250dd2c 914 PRINTS PR00344 Bacterial sensor protein C-terminal signature 648 661 3.1E-12 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS15615 2df410ecddb18f030131cbbb0250dd2c 914 PRINTS PR00344 Bacterial sensor protein C-terminal signature 593 607 3.1E-12 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS15615 2df410ecddb18f030131cbbb0250dd2c 914 PRINTS PR00344 Bacterial sensor protein C-terminal signature 624 642 3.1E-12 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS15615 2df410ecddb18f030131cbbb0250dd2c 914 SUPERFAMILY SSF52172 680 806 1.85E-24 T 09-03-2017 IPR011006 CheY-like superfamily RG43_RS15615 2df410ecddb18f030131cbbb0250dd2c 914 Gene3D G3DSA:3.30.565.10 513 662 2.0E-42 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS15615 2df410ecddb18f030131cbbb0250dd2c 914 SMART SM00073 818 914 3.8E-21 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RG43_RS15615 2df410ecddb18f030131cbbb0250dd2c 914 Pfam PF00512 His Kinase A (phospho-acceptor) domain 443 508 1.3E-16 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS15615 2df410ecddb18f030131cbbb0250dd2c 914 Pfam PF01627 Hpt domain 827 905 4.6E-10 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RG43_RS15615 2df410ecddb18f030131cbbb0250dd2c 914 SUPERFAMILY SSF55874 497 660 5.24E-40 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS15615 2df410ecddb18f030131cbbb0250dd2c 914 SMART SM00388 443 508 4.0E-20 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS15615 2df410ecddb18f030131cbbb0250dd2c 914 Pfam PF00672 HAMP domain 334 406 7.8E-8 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RG43_RS15615 2df410ecddb18f030131cbbb0250dd2c 914 SMART SM00387 557 664 2.1E-36 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS15615 2df410ecddb18f030131cbbb0250dd2c 914 Pfam PF00072 Response regulator receiver domain 685 792 2.0E-15 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS15615 2df410ecddb18f030131cbbb0250dd2c 914 Gene3D G3DSA:1.20.120.160 818 907 9.0E-17 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RG43_RS15615 2df410ecddb18f030131cbbb0250dd2c 914 SMART SM00448 682 794 5.1E-17 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS06520 769ae15e7d32e4f9c4bfe2c535bf870f 81 Gene3D G3DSA:3.40.30.10 1 75 6.4E-29 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS06520 769ae15e7d32e4f9c4bfe2c535bf870f 81 SUPERFAMILY SSF52833 1 72 3.66E-21 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS06520 769ae15e7d32e4f9c4bfe2c535bf870f 81 TIGRFAM TIGR02194 GlrX_NrdH: glutaredoxin-like protein NrdH 3 73 8.0E-34 T 09-03-2017 IPR011909 Glutaredoxin-like protein NrdH GO:0045454 RG43_RS06520 769ae15e7d32e4f9c4bfe2c535bf870f 81 Pfam PF00462 Glutaredoxin 3 57 2.7E-13 T 09-03-2017 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 RG43_RS24195 cc4174eee4938d92c203544008c7e362 300 Hamap MF_01425 Ferrous-iron efflux pump FieF [fieF]. 1 300 67.259 T 09-03-2017 IPR023783 Cation efflux pump FieF GO:0006829|GO:0015684|GO:0016021|GO:0046873 RG43_RS24195 cc4174eee4938d92c203544008c7e362 300 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 10 288 2.4E-80 T 09-03-2017 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RG43_RS24195 cc4174eee4938d92c203544008c7e362 300 Gene3D G3DSA:3.30.70.1350 207 288 3.2E-32 T 09-03-2017 IPR027470 Cation efflux protein, cytoplasmic domain RG43_RS24195 cc4174eee4938d92c203544008c7e362 300 Pfam PF01545 Cation efflux family 14 206 1.9E-44 T 09-03-2017 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RG43_RS24195 cc4174eee4938d92c203544008c7e362 300 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 287 2.0E-26 T 09-03-2017 IPR027470 Cation efflux protein, cytoplasmic domain RG43_RS24195 cc4174eee4938d92c203544008c7e362 300 SUPERFAMILY SSF160240 209 288 8.37E-26 T 09-03-2017 RG43_RS24195 cc4174eee4938d92c203544008c7e362 300 SUPERFAMILY SSF161111 8 207 1.57E-51 T 09-03-2017 RG43_RS24195 cc4174eee4938d92c203544008c7e362 300 Gene3D G3DSA:1.20.1510.10 11 206 4.3E-45 T 09-03-2017 IPR027469 Cation efflux protein transmembrane domain RG43_RS17475 05e067501990bf5de6856bd0ddad9363 218 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 9 211 1.5E-107 T 09-03-2017 IPR010016 KipI family RG43_RS17475 05e067501990bf5de6856bd0ddad9363 218 Pfam PF02682 Allophanate hydrolase subunit 1 6 202 2.8E-70 T 09-03-2017 IPR003833 Carboxyltransferase domain, subdomain C and D RG43_RS17475 05e067501990bf5de6856bd0ddad9363 218 SMART SM00796 4 202 1.3E-94 T 09-03-2017 IPR003833 Carboxyltransferase domain, subdomain C and D RG43_RS17475 05e067501990bf5de6856bd0ddad9363 218 SUPERFAMILY SSF50891 88 214 7.59E-47 T 09-03-2017 IPR029000 Cyclophilin-like domain RG43_RS17475 05e067501990bf5de6856bd0ddad9363 218 Gene3D G3DSA:2.40.100.10 88 213 1.4E-52 T 09-03-2017 IPR029000 Cyclophilin-like domain RG43_RS17475 05e067501990bf5de6856bd0ddad9363 218 SUPERFAMILY SSF160467 5 93 1.57E-9 T 09-03-2017 RG43_RS17475 05e067501990bf5de6856bd0ddad9363 218 Gene3D G3DSA:3.30.1360.40 6 79 2.4E-8 T 09-03-2017 IPR024946 Arginine repressor C-terminal-like domain RG43_RS14300 37bfc108960179714ca5be537ab44297 334 SMART SM00382 49 242 5.5E-18 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS14300 37bfc108960179714ca5be537ab44297 334 Pfam PF00005 ABC transporter 41 192 5.8E-31 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS14300 37bfc108960179714ca5be537ab44297 334 SUPERFAMILY SSF52540 22 264 3.04E-74 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS14300 37bfc108960179714ca5be537ab44297 334 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 244 311 9.7E-19 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RG43_RS14300 37bfc108960179714ca5be537ab44297 334 Gene3D G3DSA:3.40.50.300 10 266 1.9E-80 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS14300 37bfc108960179714ca5be537ab44297 334 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS14300 37bfc108960179714ca5be537ab44297 334 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 242 329 1.2E-27 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RG43_RS20535 f8583bf1f52e72eafc017ec2d56af838 236 Pfam PF17185 NlpE C-terminal OB domain 144 232 1.1E-33 T 09-03-2017 IPR033450 NlpE, C-terminal OB domain RG43_RS20535 f8583bf1f52e72eafc017ec2d56af838 236 Pfam PF04170 NlpE N-terminal domain 45 130 5.7E-27 T 09-03-2017 IPR007298 Copper resistance lipoprotein NlpE RG43_RS07910 0fc39431cf45f67ef9e76c9a1f225d7f 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 174 7.9E-11 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS07910 0fc39431cf45f67ef9e76c9a1f225d7f 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 174 186 7.9E-11 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS07910 0fc39431cf45f67ef9e76c9a1f225d7f 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 144 158 7.9E-11 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS07910 0fc39431cf45f67ef9e76c9a1f225d7f 204 Pfam PF00072 Response regulator receiver domain 4 114 4.0E-27 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS07910 0fc39431cf45f67ef9e76c9a1f225d7f 204 Gene3D G3DSA:3.40.50.2300 2 113 9.0E-23 T 09-03-2017 RG43_RS07910 0fc39431cf45f67ef9e76c9a1f225d7f 204 Gene3D G3DSA:1.10.10.10 114 203 5.9E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS07910 0fc39431cf45f67ef9e76c9a1f225d7f 204 ProSitePatterns PS00622 LuxR-type HTH domain signature. 158 185 - T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS07910 0fc39431cf45f67ef9e76c9a1f225d7f 204 SMART SM00421 141 198 2.1E-20 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS07910 0fc39431cf45f67ef9e76c9a1f225d7f 204 SMART SM00448 1 113 1.1E-22 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS07910 0fc39431cf45f67ef9e76c9a1f225d7f 204 SUPERFAMILY SSF52172 1 124 1.85E-23 T 09-03-2017 IPR011006 CheY-like superfamily RG43_RS07910 0fc39431cf45f67ef9e76c9a1f225d7f 204 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 198 5.0E-22 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS07910 0fc39431cf45f67ef9e76c9a1f225d7f 204 SUPERFAMILY SSF46894 134 202 1.73E-17 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RG43_RS24730 4751c477727a7aa74fe7cbce4d3c0f91 328 Pfam PF01636 Phosphotransferase enzyme family 32 259 1.5E-43 T 09-03-2017 IPR002575 Aminoglycoside phosphotransferase RG43_RS24730 4751c477727a7aa74fe7cbce4d3c0f91 328 SUPERFAMILY SSF56112 6 327 2.48E-92 T 09-03-2017 IPR011009 Protein kinase-like domain RG43_RS24730 4751c477727a7aa74fe7cbce4d3c0f91 328 Gene3D G3DSA:3.90.1200.10 106 325 1.5E-46 T 09-03-2017 RG43_RS24730 4751c477727a7aa74fe7cbce4d3c0f91 328 Hamap MF_01497 Stress response kinase A [srkA]. 4 318 45.885 T 09-03-2017 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 RG43_RS00230 9071d4a99540396e249cf1e8ba1f9459 419 Gene3D G3DSA:3.30.1300.30 330 419 8.1E-16 T 09-03-2017 RG43_RS00230 9071d4a99540396e249cf1e8ba1f9459 419 SUPERFAMILY SSF101967 65 160 1.57E-9 T 09-03-2017 RG43_RS00230 9071d4a99540396e249cf1e8ba1f9459 419 Pfam PF03895 YadA-like C-terminal region 344 419 3.4E-20 T 09-03-2017 IPR005594 YadA-like, C-terminal RG43_RS00230 9071d4a99540396e249cf1e8ba1f9459 419 Gene3D G3DSA:2.150.10.10 68 159 3.4E-11 T 09-03-2017 IPR011049 Serralysin-like metalloprotease, C-terminal RG43_RS00230 9071d4a99540396e249cf1e8ba1f9459 419 SUPERFAMILY SSF54523 330 419 1.16E-17 T 09-03-2017 RG43_RS12135 23badbc0a3643641b489fd23d76d8640 429 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 5.9E-6 T 09-03-2017 RG43_RS12135 23badbc0a3643641b489fd23d76d8640 429 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 152 167 5.9E-6 T 09-03-2017 RG43_RS12135 23badbc0a3643641b489fd23d76d8640 429 SUPERFAMILY SSF54373 180 283 1.57E-24 T 09-03-2017 RG43_RS12135 23badbc0a3643641b489fd23d76d8640 429 SUPERFAMILY SSF51905 2 182 7.11E-43 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS12135 23badbc0a3643641b489fd23d76d8640 429 SUPERFAMILY SSF51905 283 392 7.11E-43 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS12135 23badbc0a3643641b489fd23d76d8640 429 Pfam PF01494 FAD binding domain 6 185 2.7E-12 T 09-03-2017 IPR002938 FAD-binding domain GO:0071949 RG43_RS12135 23badbc0a3643641b489fd23d76d8640 429 Gene3D G3DSA:3.50.50.60 5 175 1.9E-38 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS12135 23badbc0a3643641b489fd23d76d8640 429 Gene3D G3DSA:3.50.50.60 294 371 1.9E-38 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS11685 9338b443b80474db9fdf93eee40bb1a2 341 SUPERFAMILY SSF55781 18 167 5.89E-17 T 09-03-2017 IPR029016 GAF domain-like RG43_RS11685 9338b443b80474db9fdf93eee40bb1a2 341 SMART SM00267 163 335 1.2E-53 T 09-03-2017 IPR000160 GGDEF domain RG43_RS11685 9338b443b80474db9fdf93eee40bb1a2 341 Gene3D G3DSA:3.30.450.40 5 169 1.8E-16 T 09-03-2017 IPR029016 GAF domain-like RG43_RS11685 9338b443b80474db9fdf93eee40bb1a2 341 SUPERFAMILY SSF55073 179 331 1.18E-38 T 09-03-2017 IPR029787 Nucleotide cyclase RG43_RS11685 9338b443b80474db9fdf93eee40bb1a2 341 Pfam PF00990 Diguanylate cyclase, GGDEF domain 175 330 2.0E-41 T 09-03-2017 IPR000160 GGDEF domain RG43_RS11685 9338b443b80474db9fdf93eee40bb1a2 341 Gene3D G3DSA:3.30.70.270 175 337 3.1E-44 T 09-03-2017 RG43_RS11685 9338b443b80474db9fdf93eee40bb1a2 341 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 172 334 3.9E-37 T 09-03-2017 IPR000160 GGDEF domain RG43_RS11685 9338b443b80474db9fdf93eee40bb1a2 341 SMART SM00065 18 164 5.5E-17 T 09-03-2017 IPR003018 GAF domain GO:0005515 RG43_RS11685 9338b443b80474db9fdf93eee40bb1a2 341 Pfam PF13185 GAF domain 17 155 1.0E-8 T 09-03-2017 IPR003018 GAF domain GO:0005515 RG43_RS21045 36bad80a5cd6f3340c3209ff4669b0cf 132 PRINTS PR00502 NUDIX hydrolase family signature 33 47 2.5E-8 T 09-03-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 RG43_RS21045 36bad80a5cd6f3340c3209ff4669b0cf 132 PRINTS PR00502 NUDIX hydrolase family signature 47 62 2.5E-8 T 09-03-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 RG43_RS21045 36bad80a5cd6f3340c3209ff4669b0cf 132 TIGRFAM TIGR00586 mutt: mutator mutT protein 1 128 2.7E-67 T 09-03-2017 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 RG43_RS21045 36bad80a5cd6f3340c3209ff4669b0cf 132 Pfam PF00293 NUDIX domain 5 125 1.1E-20 T 09-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 RG43_RS21045 36bad80a5cd6f3340c3209ff4669b0cf 132 SUPERFAMILY SSF55811 1 127 3.25E-34 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 RG43_RS21045 36bad80a5cd6f3340c3209ff4669b0cf 132 Gene3D G3DSA:3.90.79.10 3 126 6.9E-34 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 RG43_RS21045 36bad80a5cd6f3340c3209ff4669b0cf 132 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 09-03-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RG43_RS21045 36bad80a5cd6f3340c3209ff4669b0cf 132 PRINTS PR01401 Mutator MutT protein signature 2 23 5.4E-16 T 09-03-2017 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 RG43_RS21045 36bad80a5cd6f3340c3209ff4669b0cf 132 PRINTS PR01401 Mutator MutT protein signature 77 90 5.4E-16 T 09-03-2017 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 RG43_RS23785 aa221aaeffc9e9506e602943921ef46a 234 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.432 T 09-03-2017 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 RG43_RS23785 aa221aaeffc9e9506e602943921ef46a 234 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 1.7E-107 T 09-03-2017 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 RG43_RS23785 aa221aaeffc9e9506e602943921ef46a 234 PIRSF PIRSF002155 1 227 1.9E-78 T 09-03-2017 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS23785 aa221aaeffc9e9506e602943921ef46a 234 SUPERFAMILY SSF56808 6 225 4.45E-83 T 09-03-2017 IPR023674 Ribosomal protein L1-like RG43_RS23785 aa221aaeffc9e9506e602943921ef46a 234 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 09-03-2017 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS23785 aa221aaeffc9e9506e602943921ef46a 234 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 4.5E-52 T 09-03-2017 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein RG43_RS23785 aa221aaeffc9e9506e602943921ef46a 234 Gene3D G3DSA:3.30.190.20 17 68 5.0E-47 T 09-03-2017 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 RG43_RS23785 aa221aaeffc9e9506e602943921ef46a 234 Gene3D G3DSA:3.30.190.20 161 225 5.0E-47 T 09-03-2017 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 RG43_RS23785 aa221aaeffc9e9506e602943921ef46a 234 Gene3D G3DSA:3.40.50.790 69 159 4.7E-41 T 09-03-2017 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich RG43_RS17200 388b7440f751b01deb0d56ef744bb678 49 Hamap MF_01484 Multidrug efflux pump accessory protein AcrZ [acrZ]. 1 46 19.084 T 09-03-2017 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 RG43_RS17200 388b7440f751b01deb0d56ef744bb678 49 Pfam PF10766 Multidrug efflux pump-associated protein AcrZ 1 45 6.9E-29 T 09-03-2017 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 RG43_RS08275 14c9362f4db222bfc2408592df2a27cc 183 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 169 2.9E-52 T 09-03-2017 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 RG43_RS08275 14c9362f4db222bfc2408592df2a27cc 183 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 161 5.1E-26 T 09-03-2017 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 RG43_RS08275 14c9362f4db222bfc2408592df2a27cc 183 SUPERFAMILY SSF56300 1 163 2.02E-39 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like RG43_RS08275 14c9362f4db222bfc2408592df2a27cc 183 ProSitePatterns PS01269 Uncharacterized protein family UPF0025 signature. 120 144 - T 09-03-2017 IPR020935 Phosphodiesterase YfcE, conserved site RG43_RS08275 14c9362f4db222bfc2408592df2a27cc 183 Gene3D G3DSA:3.60.21.10 1 163 2.4E-49 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like RG43_RS16305 8b2c49e1a49111284ded4bb994bb1acc 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 5 110 2.8E-17 T 09-03-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RG43_RS16305 8b2c49e1a49111284ded4bb994bb1acc 222 SUPERFAMILY SSF161098 6 200 1.83E-28 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS16305 8b2c49e1a49111284ded4bb994bb1acc 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 214 3.2E-12 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS16305 8b2c49e1a49111284ded4bb994bb1acc 222 Gene3D G3DSA:1.10.3720.10 4 214 4.4E-35 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS24535 444af201730bd8b6d135bb080bb793ae 195 SUPERFAMILY SSF53706 35 195 1.57E-57 T 09-03-2017 RG43_RS24535 444af201730bd8b6d135bb080bb793ae 195 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 09-03-2017 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 RG43_RS24535 444af201730bd8b6d135bb080bb793ae 195 Gene3D G3DSA:2.20.25.90 37 108 6.5E-25 T 09-03-2017 RG43_RS24535 444af201730bd8b6d135bb080bb793ae 195 Pfam PF00384 Molybdopterin oxidoreductase 107 155 2.6E-6 T 09-03-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS24535 444af201730bd8b6d135bb080bb793ae 195 SMART SM00926 43 104 4.9E-22 T 09-03-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS24535 444af201730bd8b6d135bb080bb793ae 195 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 44 103 3.7E-19 T 09-03-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS24535 444af201730bd8b6d135bb080bb793ae 195 Gene3D G3DSA:3.40.50.740 109 173 8.9E-16 T 09-03-2017 RG43_RS07215 0c5c49e6c04f584acc67bbd112f6dbd9 392 Gene3D G3DSA:2.140.10.10 3 390 9.5E-78 T 09-03-2017 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RG43_RS07215 0c5c49e6c04f584acc67bbd112f6dbd9 392 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 2 392 40.808 T 09-03-2017 IPR017687 Outer membrane protein assembly factor BamB RG43_RS07215 0c5c49e6c04f584acc67bbd112f6dbd9 392 SUPERFAMILY SSF50998 25 382 2.36E-79 T 09-03-2017 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RG43_RS07215 0c5c49e6c04f584acc67bbd112f6dbd9 392 Pfam PF13360 PQQ-like domain 78 319 7.4E-53 T 09-03-2017 IPR002372 Pyrrolo-quinoline quinone repeat RG43_RS07215 0c5c49e6c04f584acc67bbd112f6dbd9 392 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 8 390 8.1E-133 T 09-03-2017 IPR017687 Outer membrane protein assembly factor BamB RG43_RS07215 0c5c49e6c04f584acc67bbd112f6dbd9 392 SMART SM00564 114 146 1.3E-4 T 09-03-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RG43_RS07215 0c5c49e6c04f584acc67bbd112f6dbd9 392 SMART SM00564 65 96 1.9E-5 T 09-03-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RG43_RS07215 0c5c49e6c04f584acc67bbd112f6dbd9 392 SMART SM00564 155 186 5.3E-5 T 09-03-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RG43_RS07215 0c5c49e6c04f584acc67bbd112f6dbd9 392 SMART SM00564 200 231 66.0 T 09-03-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RG43_RS07215 0c5c49e6c04f584acc67bbd112f6dbd9 392 SMART SM00564 289 320 310.0 T 09-03-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RG43_RS07215 0c5c49e6c04f584acc67bbd112f6dbd9 392 SMART SM00564 251 282 7.7E-5 T 09-03-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RG43_RS07215 0c5c49e6c04f584acc67bbd112f6dbd9 392 SMART SM00564 329 361 1.6E-4 T 09-03-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RG43_RS14630 307c6cd08cb792cb52c4d03aa772ef79 578 Gene3D G3DSA:3.30.70.1450 421 483 6.3E-8 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RG43_RS14630 307c6cd08cb792cb52c4d03aa772ef79 578 SUPERFAMILY SSF56176 497 571 1.45E-8 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RG43_RS14630 307c6cd08cb792cb52c4d03aa772ef79 578 Pfam PF03471 Transporter associated domain 493 571 2.5E-9 T 09-03-2017 IPR005170 Transporter-associated domain RG43_RS14630 307c6cd08cb792cb52c4d03aa772ef79 578 Gene3D G3DSA:3.30.465.10 497 570 3.5E-9 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RG43_RS14630 307c6cd08cb792cb52c4d03aa772ef79 578 SMART SM01091 492 573 6.1E-14 T 09-03-2017 IPR005170 Transporter-associated domain RG43_RS14630 307c6cd08cb792cb52c4d03aa772ef79 578 Hamap MF_01075 K(+)/H(+) antiporter NhaP2 [nhaP2]. 1 576 50.508 T 09-03-2017 IPR023729 K(+)/H(+) antiporter NhaP2 GO:0005451|GO:0006812|GO:0006813|GO:0006884|GO:0016021 RG43_RS14630 307c6cd08cb792cb52c4d03aa772ef79 578 Pfam PF00999 Sodium/hydrogen exchanger family 16 388 8.9E-61 T 09-03-2017 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 RG43_RS14630 307c6cd08cb792cb52c4d03aa772ef79 578 Pfam PF02080 TrkA-C domain 421 483 2.6E-11 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RG43_RS14630 307c6cd08cb792cb52c4d03aa772ef79 578 SUPERFAMILY SSF116726 417 483 6.54E-11 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RG43_RS18425 261199f823d76ef990b27dbae11e4a3f 593 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 172 4.0E-52 T 09-03-2017 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 RG43_RS18425 261199f823d76ef990b27dbae11e4a3f 593 SUPERFAMILY SSF52518 3 186 1.73E-49 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS18425 261199f823d76ef990b27dbae11e4a3f 593 Gene3D G3DSA:3.40.50.970 2 182 6.1E-62 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS18425 261199f823d76ef990b27dbae11e4a3f 593 Gene3D G3DSA:3.40.50.1220 190 357 2.9E-51 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain RG43_RS18425 261199f823d76ef990b27dbae11e4a3f 593 SUPERFAMILY SSF52467 186 376 3.66E-47 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain RG43_RS18425 261199f823d76ef990b27dbae11e4a3f 593 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 553 6.4E-34 T 09-03-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RG43_RS18425 261199f823d76ef990b27dbae11e4a3f 593 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 193 328 3.6E-36 T 09-03-2017 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 RG43_RS18425 261199f823d76ef990b27dbae11e4a3f 593 Gene3D G3DSA:3.40.50.970 362 583 3.6E-61 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS18425 261199f823d76ef990b27dbae11e4a3f 593 TIGRFAM TIGR01504 glyox_carbo_lig: glyoxylate carboligase 2 590 0.0 T 09-03-2017 IPR006397 Glyoxylate carboligase GO:0009028|GO:0009436 KEGG: 00630+4.1.1.47 RG43_RS18425 261199f823d76ef990b27dbae11e4a3f 593 SUPERFAMILY SSF52518 369 570 8.58E-51 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS06925 5062c3e887a851c9da2633bfd5c83e9b 86 SUPERFAMILY SSF54862 5 71 1.58E-17 T 09-03-2017 RG43_RS06925 5062c3e887a851c9da2633bfd5c83e9b 86 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS06925 5062c3e887a851c9da2633bfd5c83e9b 86 Pfam PF00037 4Fe-4S binding domain 6 25 4.0E-6 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS06925 5062c3e887a851c9da2633bfd5c83e9b 86 Gene3D G3DSA:3.30.70.20 4 75 1.0E-17 T 09-03-2017 RG43_RS18735 a45d836ec333b1daaac668751214c04e 428 TIGRFAM TIGR00836 amt: ammonium transporter 31 426 1.2E-139 T 09-03-2017 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 RG43_RS18735 a45d836ec333b1daaac668751214c04e 428 SUPERFAMILY SSF111352 27 407 3.14E-128 T 09-03-2017 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 RG43_RS18735 a45d836ec333b1daaac668751214c04e 428 ProSitePatterns PS01219 Ammonium transporters signature. 182 207 - T 09-03-2017 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 RG43_RS18735 a45d836ec333b1daaac668751214c04e 428 Pfam PF00909 Ammonium Transporter Family 33 426 2.2E-131 T 09-03-2017 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 RG43_RS18735 a45d836ec333b1daaac668751214c04e 428 Gene3D G3DSA:1.10.3430.10 26 407 1.8E-140 T 09-03-2017 IPR029020 Ammonium/urea transporter RG43_RS11605 859522da99995bfca8b6a1cf67f7f91a 636 Pfam PF13307 Helicase C-terminal domain 459 616 1.9E-33 T 09-03-2017 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 RG43_RS11605 859522da99995bfca8b6a1cf67f7f91a 636 Gene3D G3DSA:3.40.50.300 8 116 2.6E-21 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS11605 859522da99995bfca8b6a1cf67f7f91a 636 Gene3D G3DSA:3.40.50.300 190 233 2.6E-21 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS11605 859522da99995bfca8b6a1cf67f7f91a 636 SMART SM00491 474 603 5.7E-54 T 09-03-2017 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 RG43_RS11605 859522da99995bfca8b6a1cf67f7f91a 636 SMART SM00487 16 286 0.0021 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain RG43_RS11605 859522da99995bfca8b6a1cf67f7f91a 636 SUPERFAMILY SSF52540 475 596 3.69E-11 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS11605 859522da99995bfca8b6a1cf67f7f91a 636 SUPERFAMILY SSF52540 38 73 3.69E-11 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS11605 859522da99995bfca8b6a1cf67f7f91a 636 SUPERFAMILY SSF52540 13 232 9.35E-29 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS11605 859522da99995bfca8b6a1cf67f7f91a 636 Gene3D G3DSA:3.40.50.300 448 597 2.5E-7 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS11605 859522da99995bfca8b6a1cf67f7f91a 636 Pfam PF04851 Type III restriction enzyme, res subunit 18 232 8.2E-6 T 09-03-2017 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 RG43_RS02995 e49f79e31d9df52e18a789af3b13a1f3 183 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 152 1.0E-55 T 09-03-2017 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 RG43_RS02995 e49f79e31d9df52e18a789af3b13a1f3 183 Pfam PF02470 MlaD protein 39 116 1.3E-21 T 09-03-2017 IPR003399 Mce/MlaD RG43_RS07035 4d9901e7d23242af6555462874eaf476 404 SMART SM00382 188 381 5.1E-6 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS07035 4d9901e7d23242af6555462874eaf476 404 Gene3D G3DSA:3.40.50.300 2 135 3.3E-27 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS07035 4d9901e7d23242af6555462874eaf476 404 Gene3D G3DSA:3.40.50.300 173 386 1.1E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS07035 4d9901e7d23242af6555462874eaf476 404 SUPERFAMILY SSF52540 3 130 2.44E-25 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS07035 4d9901e7d23242af6555462874eaf476 404 ProSitePatterns PS00211 ABC transporters family signature. 306 320 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS07035 4d9901e7d23242af6555462874eaf476 404 Pfam PF00005 ABC transporter 179 333 1.2E-23 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS07035 4d9901e7d23242af6555462874eaf476 404 Pfam PF00005 ABC transporter 3 79 2.3E-8 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS07035 4d9901e7d23242af6555462874eaf476 404 SUPERFAMILY SSF52540 174 384 3.3E-46 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS10545 340c50ec5430fe19aba902010956178e 334 Pfam PF00174 Oxidoreductase molybdopterin binding domain 108 267 4.3E-29 T 09-03-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 RG43_RS10545 340c50ec5430fe19aba902010956178e 334 Hamap MF_01206 Protein-methionine-sulfoxide reductase catalytic subunit MsrP [msrP]. 2 334 61.824 T 09-03-2017 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 RG43_RS10545 340c50ec5430fe19aba902010956178e 334 SUPERFAMILY SSF56524 75 330 2.22E-95 T 09-03-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 RG43_RS10545 340c50ec5430fe19aba902010956178e 334 Gene3D G3DSA:3.90.420.10 67 331 5.5E-77 T 09-03-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 RG43_RS12855 5232edc04082dc31ab8c8cd6d8746761 395 Pfam PF07690 Major Facilitator Superfamily 13 343 1.0E-27 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS12855 5232edc04082dc31ab8c8cd6d8746761 395 Gene3D G3DSA:1.20.1250.20 8 186 1.5E-23 T 09-03-2017 RG43_RS12855 5232edc04082dc31ab8c8cd6d8746761 395 Gene3D G3DSA:1.20.1250.20 205 382 5.8E-8 T 09-03-2017 RG43_RS12855 5232edc04082dc31ab8c8cd6d8746761 395 SUPERFAMILY SSF103473 7 384 1.7E-43 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS06690 0f1a1505a92b1343234682838ca09b1f 172 Pfam PF13689 Domain of unknown function (DUF4154) 34 167 1.5E-29 T 09-03-2017 IPR025293 Protein of unknown function DUF4154 RG43_RS20905 3e6b118f169c66d8e73acd533dd0beb5 796 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 404 425 - T 09-03-2017 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 RG43_RS20905 3e6b118f169c66d8e73acd533dd0beb5 796 Gene3D G3DSA:2.140.10.10 568 793 7.7E-164 T 09-03-2017 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RG43_RS20905 3e6b118f169c66d8e73acd533dd0beb5 796 Gene3D G3DSA:2.140.10.10 159 533 7.7E-164 T 09-03-2017 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RG43_RS20905 3e6b118f169c66d8e73acd533dd0beb5 796 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 15 792 0.0 T 09-03-2017 IPR017511 PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate-related GO:0016021|GO:0016614|GO:0048038|GO:0055114 RG43_RS20905 3e6b118f169c66d8e73acd533dd0beb5 796 Pfam PF01011 PQQ enzyme repeat 225 258 6.6E-8 T 09-03-2017 IPR002372 Pyrrolo-quinoline quinone repeat RG43_RS20905 3e6b118f169c66d8e73acd533dd0beb5 796 Pfam PF01011 PQQ enzyme repeat 721 758 5.1E-6 T 09-03-2017 IPR002372 Pyrrolo-quinoline quinone repeat RG43_RS20905 3e6b118f169c66d8e73acd533dd0beb5 796 Pfam PF01011 PQQ enzyme repeat 442 468 9.2E-7 T 09-03-2017 IPR002372 Pyrrolo-quinoline quinone repeat RG43_RS20905 3e6b118f169c66d8e73acd533dd0beb5 796 Pfam PF01011 PQQ enzyme repeat 289 321 3.8E-4 T 09-03-2017 IPR002372 Pyrrolo-quinoline quinone repeat RG43_RS20905 3e6b118f169c66d8e73acd533dd0beb5 796 Pfam PF01011 PQQ enzyme repeat 357 387 2.4E-5 T 09-03-2017 IPR002372 Pyrrolo-quinoline quinone repeat RG43_RS20905 3e6b118f169c66d8e73acd533dd0beb5 796 Pfam PF01011 PQQ enzyme repeat 664 696 2.0E-7 T 09-03-2017 IPR002372 Pyrrolo-quinoline quinone repeat RG43_RS20905 3e6b118f169c66d8e73acd533dd0beb5 796 ProSitePatterns PS00363 Bacterial quinoprotein dehydrogenases signature 1. 167 195 - T 09-03-2017 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 RG43_RS20905 3e6b118f169c66d8e73acd533dd0beb5 796 SUPERFAMILY SSF50998 161 521 5.49E-158 T 09-03-2017 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RG43_RS20905 3e6b118f169c66d8e73acd533dd0beb5 796 SUPERFAMILY SSF50998 557 792 5.49E-158 T 09-03-2017 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RG43_RS20905 3e6b118f169c66d8e73acd533dd0beb5 796 SMART SM00564 339 380 0.16 T 09-03-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RG43_RS20905 3e6b118f169c66d8e73acd533dd0beb5 796 SMART SM00564 715 748 0.04 T 09-03-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RG43_RS20905 3e6b118f169c66d8e73acd533dd0beb5 796 SMART SM00564 401 458 310.0 T 09-03-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RG43_RS20905 3e6b118f169c66d8e73acd533dd0beb5 796 SMART SM00564 282 314 210.0 T 09-03-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RG43_RS20905 3e6b118f169c66d8e73acd533dd0beb5 796 SMART SM00564 220 251 2.4E-6 T 09-03-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RG43_RS20905 3e6b118f169c66d8e73acd533dd0beb5 796 SMART SM00564 479 512 550.0 T 09-03-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RG43_RS21090 13926f45266f35bfffe32aab4865dd00 355 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 3 347 1.6E-113 T 09-03-2017 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 RG43_RS21090 13926f45266f35bfffe32aab4865dd00 355 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 8 353 34.986 T 09-03-2017 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 RG43_RS21090 13926f45266f35bfffe32aab4865dd00 355 Gene3D G3DSA:3.40.50.2000 5 196 1.7E-76 T 09-03-2017 RG43_RS21090 13926f45266f35bfffe32aab4865dd00 355 SUPERFAMILY SSF53756 6 353 8.69E-131 T 09-03-2017 RG43_RS21090 13926f45266f35bfffe32aab4865dd00 355 Gene3D G3DSA:3.40.50.2000 254 334 2.9E-5 T 09-03-2017 RG43_RS21090 13926f45266f35bfffe32aab4865dd00 355 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 185 344 6.1E-37 T 09-03-2017 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 RG43_RS21090 13926f45266f35bfffe32aab4865dd00 355 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 9 145 5.4E-49 T 09-03-2017 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 RG43_RS11895 72d19b49989f47e6f434ab6ca9ecd8b4 447 SUPERFAMILY SSF55909 3 441 1.2E-204 T 09-03-2017 RG43_RS11895 72d19b49989f47e6f434ab6ca9ecd8b4 447 TIGRFAM TIGR03241 arg_catab_astB: succinylarginine dihydrolase 3 440 1.0E-243 T 09-03-2017 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 RG43_RS11895 72d19b49989f47e6f434ab6ca9ecd8b4 447 Pfam PF04996 Succinylarginine dihydrolase 3 440 4.0E-213 T 09-03-2017 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 RG43_RS11895 72d19b49989f47e6f434ab6ca9ecd8b4 447 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 1 441 58.948 T 09-03-2017 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 RG43_RS11895 72d19b49989f47e6f434ab6ca9ecd8b4 447 Gene3D G3DSA:3.75.10.20 1 445 9.5E-236 T 09-03-2017 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 RG43_RS25755 8e4b62d3517079505dd1bfca44731c1a 497 Gene3D G3DSA:3.40.720.10 2 353 1.3E-86 T 09-03-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RG43_RS25755 8e4b62d3517079505dd1bfca44731c1a 497 SUPERFAMILY SSF53649 2 440 1.61E-103 T 09-03-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RG43_RS25755 8e4b62d3517079505dd1bfca44731c1a 497 Gene3D G3DSA:3.30.1120.10 373 453 9.8E-20 T 09-03-2017 RG43_RS25755 8e4b62d3517079505dd1bfca44731c1a 497 Pfam PF00884 Sulfatase 4 341 1.8E-79 T 09-03-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RG43_RS25755 8e4b62d3517079505dd1bfca44731c1a 497 ProSitePatterns PS00149 Sulfatases signature 2. 92 102 - T 09-03-2017 IPR024607 Sulfatase, conserved site RG43_RS25755 8e4b62d3517079505dd1bfca44731c1a 497 ProSitePatterns PS00523 Sulfatases signature 1. 50 62 - T 09-03-2017 IPR024607 Sulfatase, conserved site RG43_RS25755 8e4b62d3517079505dd1bfca44731c1a 497 Pfam PF16347 Domain of unknown function (DUF4976) 385 439 3.0E-7 T 09-03-2017 IPR032506 Domain of unknown function DUF4976 Reactome: R-HSA-2024096|Reactome: R-HSA-2206307 RG43_RS21070 7b58e674ba3dcc106ceb417c9db138f7 420 Gene3D G3DSA:3.30.420.40 6 138 2.1E-33 T 09-03-2017 RG43_RS21070 7b58e674ba3dcc106ceb417c9db138f7 420 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 420 29.576 T 09-03-2017 IPR020823 Cell division protein FtsA GO:0007049 RG43_RS21070 7b58e674ba3dcc106ceb417c9db138f7 420 Gene3D G3DSA:3.30.420.40 298 359 1.4E-29 T 09-03-2017 RG43_RS21070 7b58e674ba3dcc106ceb417c9db138f7 420 Gene3D G3DSA:3.30.420.40 210 234 1.4E-29 T 09-03-2017 RG43_RS21070 7b58e674ba3dcc106ceb417c9db138f7 420 SMART SM00842 10 196 1.1E-96 T 09-03-2017 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 RG43_RS21070 7b58e674ba3dcc106ceb417c9db138f7 420 Gene3D G3DSA:3.90.640.10 235 297 4.3E-18 T 09-03-2017 RG43_RS21070 7b58e674ba3dcc106ceb417c9db138f7 420 PIRSF PIRSF003101 2 420 5.3E-153 T 09-03-2017 IPR020823 Cell division protein FtsA GO:0007049 RG43_RS21070 7b58e674ba3dcc106ceb417c9db138f7 420 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 1.2E-161 T 09-03-2017 IPR020823 Cell division protein FtsA GO:0007049 RG43_RS21070 7b58e674ba3dcc106ceb417c9db138f7 420 SUPERFAMILY SSF53067 8 221 1.94E-61 T 09-03-2017 RG43_RS21070 7b58e674ba3dcc106ceb417c9db138f7 420 SUPERFAMILY SSF53067 198 384 1.36E-47 T 09-03-2017 RG43_RS21070 7b58e674ba3dcc106ceb417c9db138f7 420 Gene3D G3DSA:3.30.420.40 169 209 1.4E-5 T 09-03-2017 RG43_RS21070 7b58e674ba3dcc106ceb417c9db138f7 420 Pfam PF14450 Cell division protein FtsA 207 381 9.4E-25 T 09-03-2017 RG43_RS21070 7b58e674ba3dcc106ceb417c9db138f7 420 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 4.4E-30 T 09-03-2017 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 RG43_RS16285 c4ea051dcf62a7ec6b2b81ca4f986ac3 171 Pfam PF12883 Protein of unknown function (DUF3828) 40 154 1.6E-27 T 09-03-2017 IPR024289 Domain of unknown function DUF3828 RG43_RS09190 42f56e489167f808d0238f10719f137e 561 Gene3D G3DSA:3.30.450.40 244 363 3.6E-4 T 09-03-2017 IPR029016 GAF domain-like RG43_RS09190 42f56e489167f808d0238f10719f137e 561 Gene3D G3DSA:3.30.565.10 422 559 1.1E-12 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS09190 42f56e489167f808d0238f10719f137e 561 Pfam PF07694 5TMR of 5TMR-LYT 28 196 8.3E-57 T 09-03-2017 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 RG43_RS09190 42f56e489167f808d0238f10719f137e 561 SUPERFAMILY SSF55781 243 359 5.23E-8 T 09-03-2017 IPR029016 GAF domain-like RG43_RS09190 42f56e489167f808d0238f10719f137e 561 Pfam PF06580 Histidine kinase 371 448 1.5E-25 T 09-03-2017 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 RG43_RS09190 42f56e489167f808d0238f10719f137e 561 SMART SM00065 218 365 4.9E-12 T 09-03-2017 IPR003018 GAF domain GO:0005515 RG43_RS09190 42f56e489167f808d0238f10719f137e 561 Pfam PF13492 GAF domain 243 355 3.2E-6 T 09-03-2017 IPR003018 GAF domain GO:0005515 RG43_RS09190 42f56e489167f808d0238f10719f137e 561 SUPERFAMILY SSF55874 424 556 2.88E-13 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS21065 c16a16e243d432912840fefd5939be2e 383 ProSitePatterns PS01134 FtsZ protein signature 1. 43 77 - T 09-03-2017 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 RG43_RS21065 c16a16e243d432912840fefd5939be2e 383 SMART SM00865 206 324 3.4E-56 T 09-03-2017 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-983189 RG43_RS21065 c16a16e243d432912840fefd5939be2e 383 Gene3D G3DSA:3.30.1330.20 214 321 4.3E-47 T 09-03-2017 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-983189 RG43_RS21065 c16a16e243d432912840fefd5939be2e 383 Gene3D G3DSA:3.40.50.1440 13 213 2.5E-93 T 09-03-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 RG43_RS21065 c16a16e243d432912840fefd5939be2e 383 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 8 343 38.188 T 09-03-2017 IPR000158 Cell division protein FtsZ GO:0005525 RG43_RS21065 c16a16e243d432912840fefd5939be2e 383 PRINTS PR00423 Cell division protein FtsZ signature 188 210 2.5E-52 T 09-03-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 RG43_RS21065 c16a16e243d432912840fefd5939be2e 383 PRINTS PR00423 Cell division protein FtsZ signature 97 117 2.5E-52 T 09-03-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 RG43_RS21065 c16a16e243d432912840fefd5939be2e 383 PRINTS PR00423 Cell division protein FtsZ signature 211 232 2.5E-52 T 09-03-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 RG43_RS21065 c16a16e243d432912840fefd5939be2e 383 PRINTS PR00423 Cell division protein FtsZ signature 125 146 2.5E-52 T 09-03-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 RG43_RS21065 c16a16e243d432912840fefd5939be2e 383 ProSitePatterns PS01135 FtsZ protein signature 2. 96 117 - T 09-03-2017 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 RG43_RS21065 c16a16e243d432912840fefd5939be2e 383 SMART SM00864 12 204 3.3E-111 T 09-03-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 RG43_RS21065 c16a16e243d432912840fefd5939be2e 383 SUPERFAMILY SSF55307 203 319 7.33E-43 T 09-03-2017 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 RG43_RS21065 c16a16e243d432912840fefd5939be2e 383 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 13 172 1.9E-42 T 09-03-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 RG43_RS21065 c16a16e243d432912840fefd5939be2e 383 Pfam PF12327 FtsZ family, C-terminal domain 221 315 3.8E-37 T 09-03-2017 IPR024757 Cell division protein FtsZ, C-terminal RG43_RS21065 c16a16e243d432912840fefd5939be2e 383 SUPERFAMILY SSF52490 12 207 1.7E-69 T 09-03-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 RG43_RS21065 c16a16e243d432912840fefd5939be2e 383 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 338 4.5E-142 T 09-03-2017 IPR000158 Cell division protein FtsZ GO:0005525 RG43_RS06465 64bea006ef1b176c4639c5dd6c38a563 176 ProSitePatterns PS01117 MarR-type HTH domain signature. 87 121 - T 09-03-2017 IPR023187 Transcriptional regulator MarR-type, conserved site RG43_RS06465 64bea006ef1b176c4639c5dd6c38a563 176 SUPERFAMILY SSF46785 22 166 3.29E-28 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS06465 64bea006ef1b176c4639c5dd6c38a563 176 SMART SM00347 46 148 3.0E-31 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RG43_RS06465 64bea006ef1b176c4639c5dd6c38a563 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 88 2.4E-24 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RG43_RS06465 64bea006ef1b176c4639c5dd6c38a563 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 104 2.4E-24 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RG43_RS06465 64bea006ef1b176c4639c5dd6c38a563 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 138 158 2.4E-24 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RG43_RS06465 64bea006ef1b176c4639c5dd6c38a563 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 108 124 2.4E-24 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RG43_RS06465 64bea006ef1b176c4639c5dd6c38a563 176 Pfam PF01047 MarR family 53 112 1.4E-16 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RG43_RS06465 64bea006ef1b176c4639c5dd6c38a563 176 Gene3D G3DSA:1.10.10.10 16 167 7.2E-34 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS19325 a12fad84903e352c27fedc17ec9230e3 628 Gene3D G3DSA:3.30.300.30 495 606 6.0E-26 T 09-03-2017 RG43_RS19325 a12fad84903e352c27fedc17ec9230e3 628 Gene3D G3DSA:3.40.50.980 53 240 3.7E-35 T 09-03-2017 RG43_RS19325 a12fad84903e352c27fedc17ec9230e3 628 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 4 57 8.4E-22 T 09-03-2017 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 RG43_RS19325 a12fad84903e352c27fedc17ec9230e3 628 Gene3D G3DSA:3.40.50.980 241 396 6.7E-26 T 09-03-2017 RG43_RS19325 a12fad84903e352c27fedc17ec9230e3 628 TIGRFAM TIGR02316 propion_prpE: propionate--CoA ligase 1 628 0.0 T 09-03-2017 IPR012694 Propionate--CoA ligase GO:0019629|GO:0050218 KEGG: 00640+6.2.1.17|MetaCyc: PWY-3941|MetaCyc: PWY-5104|MetaCyc: PWY-5747 RG43_RS19325 a12fad84903e352c27fedc17ec9230e3 628 Pfam PF00501 AMP-binding enzyme 59 500 2.1E-79 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RG43_RS19325 a12fad84903e352c27fedc17ec9230e3 628 Pfam PF13193 AMP-binding enzyme C-terminal domain 509 592 5.3E-24 T 09-03-2017 IPR025110 AMP-binding enzyme C-terminal domain RG43_RS19325 a12fad84903e352c27fedc17ec9230e3 628 ProSitePatterns PS00455 Putative AMP-binding domain signature. 237 248 - T 09-03-2017 IPR020845 AMP-binding, conserved site RG43_RS19325 a12fad84903e352c27fedc17ec9230e3 628 Gene3D G3DSA:2.30.38.10 410 490 1.4E-5 T 09-03-2017 RG43_RS19325 a12fad84903e352c27fedc17ec9230e3 628 SUPERFAMILY SSF56801 4 617 1.05E-156 T 09-03-2017 RG43_RS24360 d49214eb0426bdc57aa008afcf69a6aa 307 SUPERFAMILY SSF53335 6 275 2.25E-41 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS24360 d49214eb0426bdc57aa008afcf69a6aa 307 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 197 203 - T 09-03-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RG43_RS24360 d49214eb0426bdc57aa008afcf69a6aa 307 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 35 49 1.5E-7 T 09-03-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 RG43_RS24360 d49214eb0426bdc57aa008afcf69a6aa 307 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 194 206 1.5E-7 T 09-03-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 RG43_RS24360 d49214eb0426bdc57aa008afcf69a6aa 307 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 1.5E-7 T 09-03-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 RG43_RS24360 d49214eb0426bdc57aa008afcf69a6aa 307 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 252 5.3E-20 T 09-03-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 RG43_RS24360 d49214eb0426bdc57aa008afcf69a6aa 307 Gene3D G3DSA:3.40.50.150 4 69 3.3E-28 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS24360 d49214eb0426bdc57aa008afcf69a6aa 307 Gene3D G3DSA:3.40.50.150 177 276 3.3E-28 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS24360 d49214eb0426bdc57aa008afcf69a6aa 307 PIRSF PIRSF000398 1 280 1.5E-49 T 09-03-2017 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 RG43_RS18910 dad5c3404a7cbb501851087af9277516 325 PIRSF PIRSF005303 1 322 3.2E-87 T 09-03-2017 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 RG43_RS18910 dad5c3404a7cbb501851087af9277516 325 Pfam PF02769 AIR synthase related protein, C-terminal domain 150 299 1.8E-9 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain RG43_RS18910 dad5c3404a7cbb501851087af9277516 325 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 3 319 32.431 T 09-03-2017 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 RG43_RS18910 dad5c3404a7cbb501851087af9277516 325 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 4 322 5.6E-120 T 09-03-2017 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 RG43_RS18910 dad5c3404a7cbb501851087af9277516 325 SUPERFAMILY SSF55326 4 138 1.41E-34 T 09-03-2017 RG43_RS18910 dad5c3404a7cbb501851087af9277516 325 Gene3D G3DSA:3.90.650.10 145 322 1.1E-54 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain RG43_RS18910 dad5c3404a7cbb501851087af9277516 325 Pfam PF00586 AIR synthase related protein, N-terminal domain 29 138 4.8E-21 T 09-03-2017 IPR016188 PurM-like, N-terminal domain RG43_RS18910 dad5c3404a7cbb501851087af9277516 325 Gene3D G3DSA:3.30.1330.10 3 139 8.3E-46 T 09-03-2017 IPR016188 PurM-like, N-terminal domain RG43_RS18910 dad5c3404a7cbb501851087af9277516 325 SUPERFAMILY SSF56042 143 307 1.38E-40 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain RG43_RS02105 693b315dcca58aea4e10ca149cda4777 268 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 21 250 1.9E-84 T 09-03-2017 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 RG43_RS02105 693b315dcca58aea4e10ca149cda4777 268 Gene3D G3DSA:1.20.1080.10 24 250 3.2E-60 T 09-03-2017 IPR023271 Aquaporin-like Reactome: R-HSA-432047 RG43_RS02105 693b315dcca58aea4e10ca149cda4777 268 Pfam PF01226 Formate/nitrite transporter 20 247 1.0E-56 T 09-03-2017 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 RG43_RS02105 693b315dcca58aea4e10ca149cda4777 268 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 157 167 - T 09-03-2017 IPR024002 Formate/nitrite transporter, conserved site RG43_RS02105 693b315dcca58aea4e10ca149cda4777 268 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 73 82 - T 09-03-2017 IPR024002 Formate/nitrite transporter, conserved site RG43_RS02425 98f615537815942b22a86925403a8f47 130 SUPERFAMILY SSF56047 5 129 4.97E-46 T 09-03-2017 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02425 98f615537815942b22a86925403a8f47 130 Gene3D G3DSA:3.30.1490.10 74 129 4.2E-28 T 09-03-2017 RG43_RS02425 98f615537815942b22a86925403a8f47 130 Gene3D G3DSA:3.30.1370.30 2 72 2.3E-28 T 09-03-2017 RG43_RS02425 98f615537815942b22a86925403a8f47 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 09-03-2017 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02425 98f615537815942b22a86925403a8f47 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.942 T 09-03-2017 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02425 98f615537815942b22a86925403a8f47 130 Pfam PF00410 Ribosomal protein S8 5 129 4.8E-49 T 09-03-2017 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS09000 5b75ada18240394060447a831d9188d8 285 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 279 45.181 T 09-03-2017 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 RG43_RS09000 5b75ada18240394060447a831d9188d8 285 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 175 182 - T 09-03-2017 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 RG43_RS09000 5b75ada18240394060447a831d9188d8 285 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 2 276 6.0E-118 T 09-03-2017 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 RG43_RS09000 5b75ada18240394060447a831d9188d8 285 SMART SM00518 3 279 3.2E-146 T 09-03-2017 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 RG43_RS09000 5b75ada18240394060447a831d9188d8 285 Pfam PF01261 Xylose isomerase-like TIM barrel 21 239 6.1E-44 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain RG43_RS09000 5b75ada18240394060447a831d9188d8 285 SUPERFAMILY SSF51658 1 277 5.24E-105 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain RG43_RS09000 5b75ada18240394060447a831d9188d8 285 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 215 231 - T 09-03-2017 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 RG43_RS09000 5b75ada18240394060447a831d9188d8 285 Gene3D G3DSA:3.20.20.150 1 278 3.3E-122 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain RG43_RS09000 5b75ada18240394060447a831d9188d8 285 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 69 77 - T 09-03-2017 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 RG43_RS01240 2b4f5dc375d165b36bcd059ce2986a5b 466 SUPERFAMILY SSF53383 6 451 1.16E-132 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS01240 2b4f5dc375d165b36bcd059ce2986a5b 466 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 269 290 - T 09-03-2017 IPR021115 Pyridoxal-phosphate binding site GO:0016831 RG43_RS01240 2b4f5dc375d165b36bcd059ce2986a5b 466 Gene3D G3DSA:3.40.640.10 75 321 2.0E-24 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS01240 2b4f5dc375d165b36bcd059ce2986a5b 466 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 33 383 1.5E-114 T 09-03-2017 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 RG43_RS01240 2b4f5dc375d165b36bcd059ce2986a5b 466 TIGRFAM TIGR01788 Glu-decarb-GAD: glutamate decarboxylase 16 448 2.8E-209 T 09-03-2017 IPR010107 Glutamate decarboxylase GO:0004351|GO:0006536|GO:0030170 KEGG: 00250+4.1.1.15|KEGG: 00410+4.1.1.15|KEGG: 00430+4.1.1.15|KEGG: 00650+4.1.1.15|MetaCyc: PWY-4321 RG43_RS06140 4234d7b268b94820b26c4a45b8a10d98 379 Gene3D G3DSA:3.10.350.10 121 165 6.7E-12 T 09-03-2017 IPR018392 LysM domain RG43_RS06140 4234d7b268b94820b26c4a45b8a10d98 379 Pfam PF01551 Peptidase family M23 279 372 1.2E-31 T 09-03-2017 IPR016047 Peptidase M23 RG43_RS06140 4234d7b268b94820b26c4a45b8a10d98 379 Pfam PF01476 LysM domain 123 165 2.2E-10 T 09-03-2017 IPR018392 LysM domain RG43_RS06140 4234d7b268b94820b26c4a45b8a10d98 379 Gene3D G3DSA:2.70.70.10 244 377 4.1E-42 T 09-03-2017 RG43_RS06140 4234d7b268b94820b26c4a45b8a10d98 379 SMART SM00257 122 166 9.3E-12 T 09-03-2017 IPR018392 LysM domain RG43_RS06140 4234d7b268b94820b26c4a45b8a10d98 379 SUPERFAMILY SSF51261 122 376 1.36E-53 T 09-03-2017 IPR011055 Duplicated hybrid motif RG43_RS25430 d1afb2e4b47b8a527c0d701e868aa486 207 PIRSF PIRSF003078 1 207 5.0E-70 T 09-03-2017 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 RG43_RS25430 d1afb2e4b47b8a527c0d701e868aa486 207 Pfam PF02527 rRNA small subunit methyltransferase G 20 200 1.4E-68 T 09-03-2017 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 RG43_RS25430 d1afb2e4b47b8a527c0d701e868aa486 207 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 25 203 5.4E-63 T 09-03-2017 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 RG43_RS25430 d1afb2e4b47b8a527c0d701e868aa486 207 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 13 201 28.955 T 09-03-2017 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 RG43_RS25430 d1afb2e4b47b8a527c0d701e868aa486 207 Gene3D G3DSA:3.40.50.150 4 205 3.1E-75 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS25430 d1afb2e4b47b8a527c0d701e868aa486 207 SUPERFAMILY SSF53335 3 205 8.14E-44 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS08400 5472dc539785dfa1047e5dc5e1ab8e7e 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 337 356 1.1E-37 T 09-03-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08400 5472dc539785dfa1047e5dc5e1ab8e7e 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 249 273 1.1E-37 T 09-03-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08400 5472dc539785dfa1047e5dc5e1ab8e7e 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 139 158 1.1E-37 T 09-03-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08400 5472dc539785dfa1047e5dc5e1ab8e7e 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 174 198 1.1E-37 T 09-03-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08400 5472dc539785dfa1047e5dc5e1ab8e7e 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 389 415 1.1E-37 T 09-03-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08400 5472dc539785dfa1047e5dc5e1ab8e7e 509 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 3 499 4.5E-186 T 09-03-2017 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08400 5472dc539785dfa1047e5dc5e1ab8e7e 509 Pfam PF00361 Proton-conducting membrane transporter 134 430 4.8E-70 T 09-03-2017 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS10195 e33505d9f29789f335259b3e961c60fc 600 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS10195 e33505d9f29789f335259b3e961c60fc 600 Pfam PF00005 ABC transporter 360 509 3.7E-32 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS10195 e33505d9f29789f335259b3e961c60fc 600 SMART SM00382 369 563 6.5E-16 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS10195 e33505d9f29789f335259b3e961c60fc 600 Pfam PF00664 ABC transporter transmembrane region 68 277 1.7E-20 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RG43_RS10195 e33505d9f29789f335259b3e961c60fc 600 SUPERFAMILY SSF90123 16 331 4.32E-44 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RG43_RS10195 e33505d9f29789f335259b3e961c60fc 600 SUPERFAMILY SSF52540 337 579 3.28E-86 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS10195 e33505d9f29789f335259b3e961c60fc 600 Gene3D G3DSA:3.40.50.300 341 573 1.3E-75 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS10195 e33505d9f29789f335259b3e961c60fc 600 Gene3D G3DSA:1.20.1560.10 16 326 6.7E-34 T 09-03-2017 RG43_RS15365 08cfcfb38eacd82a710a282d03a10e53 152 Pfam PF07012 Curlin associated repeat 109 142 2.8E-6 T 09-03-2017 IPR009742 Curlin associated GO:0007155|GO:0009289 RG43_RS15365 08cfcfb38eacd82a710a282d03a10e53 152 Pfam PF07012 Curlin associated repeat 87 120 1.4E-9 T 09-03-2017 IPR009742 Curlin associated GO:0007155|GO:0009289 RG43_RS15365 08cfcfb38eacd82a710a282d03a10e53 152 Pfam PF07012 Curlin associated repeat 41 75 9.7E-9 T 09-03-2017 IPR009742 Curlin associated GO:0007155|GO:0009289 RG43_RS07840 e358aa4e86398a460782239d4e7a5955 565 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 456 552 8.3E-7 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS07840 e358aa4e86398a460782239d4e7a5955 565 SUPERFAMILY SSF55874 414 551 1.31E-18 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS07840 e358aa4e86398a460782239d4e7a5955 565 Pfam PF07694 5TMR of 5TMR-LYT 29 192 3.9E-43 T 09-03-2017 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 RG43_RS07840 e358aa4e86398a460782239d4e7a5955 565 SMART SM00387 452 554 3.5E-9 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS07840 e358aa4e86398a460782239d4e7a5955 565 Pfam PF06580 Histidine kinase 359 438 1.1E-24 T 09-03-2017 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 RG43_RS07840 e358aa4e86398a460782239d4e7a5955 565 Gene3D G3DSA:3.30.450.40 293 348 1.6E-4 T 09-03-2017 IPR029016 GAF domain-like RG43_RS07840 e358aa4e86398a460782239d4e7a5955 565 Gene3D G3DSA:3.30.565.10 411 553 2.2E-17 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS07840 e358aa4e86398a460782239d4e7a5955 565 SUPERFAMILY SSF55781 226 345 4.21E-8 T 09-03-2017 IPR029016 GAF domain-like RG43_RS07840 e358aa4e86398a460782239d4e7a5955 565 Pfam PF01590 GAF domain 228 346 1.8E-4 T 09-03-2017 IPR003018 GAF domain GO:0005515 RG43_RS21735 2c38b385901f0fd7a3b942bd3aca8027 343 Pfam PF08468 Methyltransferase small domain N-terminal 8 162 4.9E-57 T 09-03-2017 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RG43_RS21735 2c38b385901f0fd7a3b942bd3aca8027 343 SUPERFAMILY SSF53335 154 315 2.41E-32 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS21735 2c38b385901f0fd7a3b942bd3aca8027 343 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 336 45.839 T 09-03-2017 IPR023543 rRNA small subunit methyltransferase C GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RG43_RS21735 2c38b385901f0fd7a3b942bd3aca8027 343 Gene3D G3DSA:3.40.50.150 159 332 7.6E-29 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS21735 2c38b385901f0fd7a3b942bd3aca8027 343 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 265 271 - T 09-03-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RG43_RS21735 2c38b385901f0fd7a3b942bd3aca8027 343 Pfam PF05175 Methyltransferase small domain 167 333 4.8E-61 T 09-03-2017 IPR007848 Methyltransferase small domain GO:0008168 RG43_RS10345 7cc6399d34a58410f4041df40714d662 229 PIRSF PIRSF004417 1 229 1.6E-120 T 09-03-2017 IPR010455 Bacteriophage 82, GpQ RG43_RS10345 7cc6399d34a58410f4041df40714d662 229 Pfam PF06323 Phage antitermination protein Q 4 220 4.5E-85 T 09-03-2017 IPR010455 Bacteriophage 82, GpQ RG43_RS10345 7cc6399d34a58410f4041df40714d662 229 ProDom PD038144 ANTITERMINATOR Q PROPHAGE TRANSCRIPTION ANTITERMINATION CP-933P GIFSY-1 ENCODED BY Q-LIKE 1 218 7.0E-115 T 09-03-2017 IPR010455 Bacteriophage 82, GpQ RG43_RS16390 7a533d661242cca8db3511764a515151 402 Pfam PF07690 Major Facilitator Superfamily 223 388 2.1E-17 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS16390 7a533d661242cca8db3511764a515151 402 SUPERFAMILY SSF103473 11 390 5.36E-45 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS16390 7a533d661242cca8db3511764a515151 402 Gene3D G3DSA:1.20.1250.20 11 186 6.9E-12 T 09-03-2017 RG43_RS16390 7a533d661242cca8db3511764a515151 402 Gene3D G3DSA:1.20.1250.20 215 396 2.9E-24 T 09-03-2017 RG43_RS11575 f97d034ad242225fd981caebaf749e6a 192 Gene3D G3DSA:3.90.79.10 25 185 7.2E-40 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 RG43_RS11575 f97d034ad242225fd981caebaf749e6a 192 ProSitePatterns PS01293 Nudix CoA signature. 47 67 - T 09-03-2017 IPR000059 NUDIX hydrolase, NudL, conserved site GO:0000287|GO:0009132|GO:0016818|GO:0030145 Reactome: R-HSA-390918 RG43_RS11575 f97d034ad242225fd981caebaf749e6a 192 SUPERFAMILY SSF55811 8 181 4.87E-35 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 RG43_RS11575 f97d034ad242225fd981caebaf749e6a 192 Pfam PF00293 NUDIX domain 30 143 9.3E-15 T 09-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 RG43_RS11575 f97d034ad242225fd981caebaf749e6a 192 Hamap MF_01592 Uncharacterized Nudix hydrolase NudL [nudL]. 1 190 49.972 T 09-03-2017 IPR023735 Uncharacterised nudix hydrolase NudL GO:0016818 RG43_RS00795 b90c34ac6dd0a454bf9e10247f3a4797 378 Gene3D G3DSA:2.40.50.100 65 96 1.3E-12 T 09-03-2017 RG43_RS00795 b90c34ac6dd0a454bf9e10247f3a4797 378 Gene3D G3DSA:2.40.50.100 219 242 1.3E-12 T 09-03-2017 RG43_RS00795 b90c34ac6dd0a454bf9e10247f3a4797 378 Pfam PF00529 HlyD membrane-fusion protein of T1SS 11 367 6.5E-13 T 09-03-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RG43_RS00795 b90c34ac6dd0a454bf9e10247f3a4797 378 SUPERFAMILY SSF111369 171 301 3.4E-5 T 09-03-2017 RG43_RS00795 b90c34ac6dd0a454bf9e10247f3a4797 378 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 163 301 1.7E-9 T 09-03-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RG43_RS00795 b90c34ac6dd0a454bf9e10247f3a4797 378 SUPERFAMILY SSF111369 60 139 2.75E-10 T 09-03-2017 RG43_RS24655 82f33c2557715805d8af5a024061e004 607 Pfam PF03144 Elongation factor Tu domain 2 219 289 9.5E-10 T 09-03-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 RG43_RS24655 82f33c2557715805d8af5a024061e004 607 PRINTS PR00315 GTP-binding elongation factor signature 87 98 9.6E-15 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RG43_RS24655 82f33c2557715805d8af5a024061e004 607 PRINTS PR00315 GTP-binding elongation factor signature 123 132 9.6E-15 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RG43_RS24655 82f33c2557715805d8af5a024061e004 607 PRINTS PR00315 GTP-binding elongation factor signature 71 81 9.6E-15 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RG43_RS24655 82f33c2557715805d8af5a024061e004 607 PRINTS PR00315 GTP-binding elongation factor signature 51 59 9.6E-15 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RG43_RS24655 82f33c2557715805d8af5a024061e004 607 PRINTS PR00315 GTP-binding elongation factor signature 7 20 9.6E-15 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RG43_RS24655 82f33c2557715805d8af5a024061e004 607 SUPERFAMILY SSF54980 302 387 1.69E-15 T 09-03-2017 IPR009022 Elongation factor G, III-V domain RG43_RS24655 82f33c2557715805d8af5a024061e004 607 Gene3D G3DSA:3.30.70.240 400 478 3.0E-31 T 09-03-2017 IPR000640 Translation elongation factor EFG, V domain RG43_RS24655 82f33c2557715805d8af5a024061e004 607 SUPERFAMILY SSF52540 3 219 1.38E-59 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS24655 82f33c2557715805d8af5a024061e004 607 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 599 8.7E-294 T 09-03-2017 IPR006298 GTP-binding protein TypA GO:0005525 RG43_RS24655 82f33c2557715805d8af5a024061e004 607 SUPERFAMILY SSF54980 398 512 2.16E-26 T 09-03-2017 IPR009022 Elongation factor G, III-V domain RG43_RS24655 82f33c2557715805d8af5a024061e004 607 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 09-03-2017 IPR031157 Tr-type G domain, conserved site RG43_RS24655 82f33c2557715805d8af5a024061e004 607 Gene3D G3DSA:3.40.50.300 3 205 1.9E-66 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS24655 82f33c2557715805d8af5a024061e004 607 Pfam PF00679 Elongation factor G C-terminus 397 477 4.5E-22 T 09-03-2017 IPR000640 Translation elongation factor EFG, V domain RG43_RS24655 82f33c2557715805d8af5a024061e004 607 Gene3D G3DSA:2.40.30.10 206 303 2.1E-26 T 09-03-2017 RG43_RS24655 82f33c2557715805d8af5a024061e004 607 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 134 2.2E-25 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 RG43_RS24655 82f33c2557715805d8af5a024061e004 607 SUPERFAMILY SSF50447 151 299 4.64E-34 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain RG43_RS24655 82f33c2557715805d8af5a024061e004 607 Pfam PF00009 Elongation factor Tu GTP binding domain 4 195 7.5E-58 T 09-03-2017 RG43_RS24655 82f33c2557715805d8af5a024061e004 607 Gene3D G3DSA:2.40.50.250 483 577 1.9E-40 T 09-03-2017 RG43_RS24655 82f33c2557715805d8af5a024061e004 607 Gene3D G3DSA:3.30.70.870 304 399 7.9E-38 T 09-03-2017 RG43_RS02530 3411dfab3ae774342af5bc6b6ba97e4f 374 Gene3D G3DSA:3.40.50.450 110 252 4.4E-9 T 09-03-2017 RG43_RS02530 3411dfab3ae774342af5bc6b6ba97e4f 374 Pfam PF02481 DNA recombination-mediator protein A 67 274 1.6E-70 T 09-03-2017 IPR003488 DNA recombination-mediator protein A GO:0009294 RG43_RS02530 3411dfab3ae774342af5bc6b6ba97e4f 374 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 65 283 1.2E-88 T 09-03-2017 IPR003488 DNA recombination-mediator protein A GO:0009294 RG43_RS02530 3411dfab3ae774342af5bc6b6ba97e4f 374 SUPERFAMILY SSF102405 78 283 2.29E-40 T 09-03-2017 RG43_RS13885 2e077dac787ca30779f720110fa5c823 421 Gene3D G3DSA:3.40.640.10 58 303 6.6E-84 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS13885 2e077dac787ca30779f720110fa5c823 421 SUPERFAMILY SSF53383 23 420 2.86E-129 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS13885 2e077dac787ca30779f720110fa5c823 421 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 272 - T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RG43_RS13885 2e077dac787ca30779f720110fa5c823 421 Pfam PF00202 Aminotransferase class-III 22 419 2.0E-127 T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RG43_RS13885 2e077dac787ca30779f720110fa5c823 421 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 8 421 1.9E-228 T 09-03-2017 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 RG43_RS13885 2e077dac787ca30779f720110fa5c823 421 Gene3D G3DSA:3.90.1150.10 304 420 4.2E-40 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RG43_RS03545 46394d8005da3d75cb3a9c4665a02bdc 138 Pfam PF01381 Helix-turn-helix 84 135 4.3E-7 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RG43_RS03545 46394d8005da3d75cb3a9c4665a02bdc 138 SMART SM00530 83 136 2.1E-7 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RG43_RS03545 46394d8005da3d75cb3a9c4665a02bdc 138 SUPERFAMILY SSF47413 83 137 2.96E-7 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS03545 46394d8005da3d75cb3a9c4665a02bdc 138 Gene3D G3DSA:1.10.260.40 82 137 1.0E-9 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS12100 0df0d030ad2e0ec5a7fedb69f11cff2b 478 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 1 464 46.633 T 09-03-2017 IPR003846 Uncharacterised protein family UPF0061 RG43_RS12100 0df0d030ad2e0ec5a7fedb69f11cff2b 478 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 2 450 1.9E-159 T 09-03-2017 IPR003846 Uncharacterised protein family UPF0061 RG43_RS23985 be31879d428831404d0546167233dc1f 765 Pfam PF02901 Pyruvate formate lyase-like 1 626 4.7E-204 T 09-03-2017 IPR004184 Pyruvate formate lyase domain GO:0003824 RG43_RS23985 be31879d428831404d0546167233dc1f 765 ProSitePatterns PS00850 Glycine radical domain signature. 736 744 - T 09-03-2017 IPR019777 Formate C-acetyltransferase glycine radical, conserved site RG43_RS23985 be31879d428831404d0546167233dc1f 765 Pfam PF01228 Glycine radical 646 747 2.9E-27 T 09-03-2017 IPR001150 Glycine radical domain GO:0003824|GO:0008152 RG43_RS23985 be31879d428831404d0546167233dc1f 765 SUPERFAMILY SSF51998 1 764 3.05E-222 T 09-03-2017 RG43_RS23985 be31879d428831404d0546167233dc1f 765 TIGRFAM TIGR01774 PFL2-3: glycyl radical enzyme, PFL2/glycerol dehydratase family 1 765 0.0 T 09-03-2017 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 RG43_RS23985 be31879d428831404d0546167233dc1f 765 Gene3D G3DSA:3.20.70.20 1 764 1.6E-256 T 09-03-2017 RG43_RS13125 05f7656fcc4420e1724cfb614b5602c0 799 Gene3D G3DSA:3.20.20.450 545 793 6.5E-90 T 09-03-2017 IPR001633 EAL domain RG43_RS13125 05f7656fcc4420e1724cfb614b5602c0 799 SMART SM00267 365 530 3.3E-45 T 09-03-2017 IPR000160 GGDEF domain RG43_RS13125 05f7656fcc4420e1724cfb614b5602c0 799 Gene3D G3DSA:3.30.450.20 18 124 4.1E-23 T 09-03-2017 RG43_RS13125 05f7656fcc4420e1724cfb614b5602c0 799 Pfam PF00563 EAL domain 547 781 2.6E-67 T 09-03-2017 IPR001633 EAL domain RG43_RS13125 05f7656fcc4420e1724cfb614b5602c0 799 Pfam PF00990 Diguanylate cyclase, GGDEF domain 377 525 1.2E-21 T 09-03-2017 IPR000160 GGDEF domain RG43_RS13125 05f7656fcc4420e1724cfb614b5602c0 799 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 18 126 1.2E-21 T 09-03-2017 IPR000014 PAS domain RG43_RS13125 05f7656fcc4420e1724cfb614b5602c0 799 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 141 256 1.1E-14 T 09-03-2017 IPR000014 PAS domain RG43_RS13125 05f7656fcc4420e1724cfb614b5602c0 799 Gene3D G3DSA:3.30.450.20 128 249 3.0E-17 T 09-03-2017 RG43_RS13125 05f7656fcc4420e1724cfb614b5602c0 799 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 373 526 6.0E-15 T 09-03-2017 IPR000160 GGDEF domain RG43_RS13125 05f7656fcc4420e1724cfb614b5602c0 799 SUPERFAMILY SSF55785 25 134 1.29E-19 T 09-03-2017 IPR000014 PAS domain RG43_RS13125 05f7656fcc4420e1724cfb614b5602c0 799 SUPERFAMILY SSF55785 143 250 9.25E-17 T 09-03-2017 IPR000014 PAS domain RG43_RS13125 05f7656fcc4420e1724cfb614b5602c0 799 SMART SM00086 209 251 1.1E-5 T 09-03-2017 IPR001610 PAC motif RG43_RS13125 05f7656fcc4420e1724cfb614b5602c0 799 SMART SM00086 88 128 0.0094 T 09-03-2017 IPR001610 PAC motif RG43_RS13125 05f7656fcc4420e1724cfb614b5602c0 799 SMART SM00052 540 786 5.2E-124 T 09-03-2017 IPR001633 EAL domain RG43_RS13125 05f7656fcc4420e1724cfb614b5602c0 799 Gene3D G3DSA:3.30.70.270 378 538 2.5E-30 T 09-03-2017 RG43_RS13125 05f7656fcc4420e1724cfb614b5602c0 799 SMART SM00091 136 203 4.1E-7 T 09-03-2017 IPR000014 PAS domain RG43_RS13125 05f7656fcc4420e1724cfb614b5602c0 799 SMART SM00091 12 78 5.4E-9 T 09-03-2017 IPR000014 PAS domain RG43_RS13125 05f7656fcc4420e1724cfb614b5602c0 799 SUPERFAMILY SSF55073 381 532 5.89E-28 T 09-03-2017 IPR029787 Nucleotide cyclase RG43_RS13125 05f7656fcc4420e1724cfb614b5602c0 799 SUPERFAMILY SSF141868 547 794 2.48E-82 T 09-03-2017 IPR001633 EAL domain RG43_RS13125 05f7656fcc4420e1724cfb614b5602c0 799 Pfam PF13426 PAS domain 24 125 1.1E-12 T 09-03-2017 IPR000014 PAS domain RG43_RS13125 05f7656fcc4420e1724cfb614b5602c0 799 Pfam PF13426 PAS domain 149 250 2.5E-11 T 09-03-2017 IPR000014 PAS domain RG43_RS11020 7f806aa4d5cc9a3a755ef1ace640419b 116 Hamap MF_00725 Flagellar transcriptional regulator FlhD [flhD]. 1 104 28.278 T 09-03-2017 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 RG43_RS11020 7f806aa4d5cc9a3a755ef1ace640419b 116 SUPERFAMILY SSF63592 1 98 1.23E-39 T 09-03-2017 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 RG43_RS11020 7f806aa4d5cc9a3a755ef1ace640419b 116 ProDom PD015582 ACTIVATOR TRANSCRIPTIONAL TRANSCRIPTION FLAGELLUM FLHD FLAGELLAR DNA-BINDING REGULATION REGULATOR PROBABLE 9 98 5.0E-47 T 09-03-2017 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 RG43_RS11020 7f806aa4d5cc9a3a755ef1ace640419b 116 Pfam PF05247 Flagellar transcriptional activator (FlhD) 1 100 4.4E-41 T 09-03-2017 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 RG43_RS23340 51aaf3dcb27be7b8784c06c1895d0b3c 178 PIRSF PIRSF002070 2 161 1.1E-41 T 09-03-2017 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 RG43_RS23340 51aaf3dcb27be7b8784c06c1895d0b3c 178 SUPERFAMILY SSF50249 4 178 1.34E-63 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS23340 51aaf3dcb27be7b8784c06c1895d0b3c 178 Pfam PF00436 Single-strand binding protein family 6 112 8.5E-43 T 09-03-2017 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 RG43_RS23340 51aaf3dcb27be7b8784c06c1895d0b3c 178 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 178 3.2E-62 T 09-03-2017 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 RG43_RS23340 51aaf3dcb27be7b8784c06c1895d0b3c 178 Gene3D G3DSA:2.40.50.140 4 178 4.6E-60 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS23340 51aaf3dcb27be7b8784c06c1895d0b3c 178 Hamap MF_00984 Single-stranded DNA-binding protein. 6 117 40.014 T 09-03-2017 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 RG43_RS26590 5c3ddef795a2f4d2ad640c5b53a9d463 294 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 59 291 3.4E-58 T 09-03-2017 RG43_RS26590 5c3ddef795a2f4d2ad640c5b53a9d463 294 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 186 214 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RG43_RS26590 5c3ddef795a2f4d2ad640c5b53a9d463 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 199 218 6.2E-5 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS26590 5c3ddef795a2f4d2ad640c5b53a9d463 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 138 6.2E-5 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS26590 5c3ddef795a2f4d2ad640c5b53a9d463 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 179 187 6.2E-5 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS26590 5c3ddef795a2f4d2ad640c5b53a9d463 294 SUPERFAMILY SSF51735 48 293 8.76E-74 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS26590 5c3ddef795a2f4d2ad640c5b53a9d463 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 138 3.9E-32 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS26590 5c3ddef795a2f4d2ad640c5b53a9d463 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 51 68 3.9E-32 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS26590 5c3ddef795a2f4d2ad640c5b53a9d463 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 199 218 3.9E-32 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS26590 5c3ddef795a2f4d2ad640c5b53a9d463 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 255 275 3.9E-32 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS26590 5c3ddef795a2f4d2ad640c5b53a9d463 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 237 3.9E-32 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS26590 5c3ddef795a2f4d2ad640c5b53a9d463 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 189 3.9E-32 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS26590 5c3ddef795a2f4d2ad640c5b53a9d463 294 Gene3D G3DSA:3.40.50.720 45 292 3.4E-75 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS04215 5c3ddef795a2f4d2ad640c5b53a9d463 294 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 59 291 3.4E-58 T 09-03-2017 RG43_RS04215 5c3ddef795a2f4d2ad640c5b53a9d463 294 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 186 214 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RG43_RS04215 5c3ddef795a2f4d2ad640c5b53a9d463 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 199 218 6.2E-5 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS04215 5c3ddef795a2f4d2ad640c5b53a9d463 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 138 6.2E-5 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS04215 5c3ddef795a2f4d2ad640c5b53a9d463 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 179 187 6.2E-5 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS04215 5c3ddef795a2f4d2ad640c5b53a9d463 294 SUPERFAMILY SSF51735 48 293 8.76E-74 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS04215 5c3ddef795a2f4d2ad640c5b53a9d463 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 138 3.9E-32 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS04215 5c3ddef795a2f4d2ad640c5b53a9d463 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 51 68 3.9E-32 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS04215 5c3ddef795a2f4d2ad640c5b53a9d463 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 199 218 3.9E-32 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS04215 5c3ddef795a2f4d2ad640c5b53a9d463 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 255 275 3.9E-32 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS04215 5c3ddef795a2f4d2ad640c5b53a9d463 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 237 3.9E-32 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS04215 5c3ddef795a2f4d2ad640c5b53a9d463 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 189 3.9E-32 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS04215 5c3ddef795a2f4d2ad640c5b53a9d463 294 Gene3D G3DSA:3.40.50.720 45 292 3.4E-75 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS02040 ad010e718fc10e3d2266a67c8bffb594 252 SUPERFAMILY SSF56784 2 239 1.85E-59 T 09-03-2017 IPR023214 HAD-like domain RG43_RS02040 ad010e718fc10e3d2266a67c8bffb594 252 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 124 204 1.8E-12 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RG43_RS02040 ad010e718fc10e3d2266a67c8bffb594 252 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 7 240 36.6 T 09-03-2017 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 RG43_RS02040 ad010e718fc10e3d2266a67c8bffb594 252 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 10 239 7.1E-102 T 09-03-2017 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 RG43_RS02040 ad010e718fc10e3d2266a67c8bffb594 252 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 209 5.4E-37 T 09-03-2017 IPR023214 HAD-like domain RG43_RS02040 ad010e718fc10e3d2266a67c8bffb594 252 Gene3D G3DSA:1.10.150.240 22 99 1.1E-26 T 09-03-2017 IPR023198 Phosphoglycolate phosphatase, domain 2 RG43_RS02040 ad010e718fc10e3d2266a67c8bffb594 252 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 95 209 4.8E-15 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RG43_RS02040 ad010e718fc10e3d2266a67c8bffb594 252 Gene3D G3DSA:3.40.50.1000 100 239 9.5E-47 T 09-03-2017 IPR023214 HAD-like domain RG43_RS02040 ad010e718fc10e3d2266a67c8bffb594 252 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 123 136 1.8E-13 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RG43_RS02040 ad010e718fc10e3d2266a67c8bffb594 252 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 170 1.8E-13 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RG43_RS02040 ad010e718fc10e3d2266a67c8bffb594 252 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 1.8E-13 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RG43_RS02040 ad010e718fc10e3d2266a67c8bffb594 252 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 172 192 1.8E-13 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RG43_RS08200 bff1f5c7cbfc3a622757cf9c35c40d6f 422 PIRSF PIRSF001563 6 419 1.6E-109 T 09-03-2017 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 RG43_RS08200 bff1f5c7cbfc3a622757cf9c35c40d6f 422 Pfam PF02875 Mur ligase family, glutamate ligase domain 287 346 8.6E-7 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 RG43_RS08200 bff1f5c7cbfc3a622757cf9c35c40d6f 422 SUPERFAMILY SSF53623 13 284 4.27E-89 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RG43_RS08200 bff1f5c7cbfc3a622757cf9c35c40d6f 422 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 52 75 - T 09-03-2017 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 RG43_RS08200 bff1f5c7cbfc3a622757cf9c35c40d6f 422 Pfam PF08245 Mur ligase middle domain 54 197 2.1E-10 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RG43_RS08200 bff1f5c7cbfc3a622757cf9c35c40d6f 422 Gene3D G3DSA:3.40.1190.10 10 284 2.6E-93 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RG43_RS08200 bff1f5c7cbfc3a622757cf9c35c40d6f 422 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 09-03-2017 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 RG43_RS08200 bff1f5c7cbfc3a622757cf9c35c40d6f 422 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 413 2.4E-115 T 09-03-2017 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 RG43_RS08200 bff1f5c7cbfc3a622757cf9c35c40d6f 422 Gene3D G3DSA:3.90.190.20 288 415 1.6E-46 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 RG43_RS08200 bff1f5c7cbfc3a622757cf9c35c40d6f 422 SUPERFAMILY SSF53244 286 414 4.58E-34 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 RG43_RS13250 498f6596f39610c7bf7164299488da7a 349 Pfam PF17178 Membrane-associated sensor 9 190 2.5E-48 T 09-03-2017 IPR033444 Membrane-associated sensor MASE5 RG43_RS13250 498f6596f39610c7bf7164299488da7a 349 SMART SM00267 180 349 4.0E-58 T 09-03-2017 IPR000160 GGDEF domain RG43_RS13250 498f6596f39610c7bf7164299488da7a 349 Gene3D G3DSA:3.30.70.270 193 348 7.7E-51 T 09-03-2017 RG43_RS13250 498f6596f39610c7bf7164299488da7a 349 SUPERFAMILY SSF55073 196 348 1.73E-44 T 09-03-2017 IPR029787 Nucleotide cyclase RG43_RS13250 498f6596f39610c7bf7164299488da7a 349 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 187 347 7.6E-47 T 09-03-2017 IPR000160 GGDEF domain RG43_RS13250 498f6596f39610c7bf7164299488da7a 349 Pfam PF00990 Diguanylate cyclase, GGDEF domain 191 346 3.3E-48 T 09-03-2017 IPR000160 GGDEF domain RG43_RS19725 19d6afee8fbcc54911b70de1f6938406 247 SUPERFAMILY SSF46689 187 235 2.9E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS19725 19d6afee8fbcc54911b70de1f6938406 247 SMART SM00342 151 233 2.4E-30 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS19725 19d6afee8fbcc54911b70de1f6938406 247 Pfam PF12833 Helix-turn-helix domain 159 235 2.4E-14 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS19725 19d6afee8fbcc54911b70de1f6938406 247 Gene3D G3DSA:1.10.10.60 187 235 4.8E-14 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS19725 19d6afee8fbcc54911b70de1f6938406 247 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 202 217 1.9E-7 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RG43_RS19725 19d6afee8fbcc54911b70de1f6938406 247 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 217 233 1.9E-7 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RG43_RS24960 c40328ef52ad31618c788c8952983280 185 SUPERFAMILY SSF53697 6 184 1.44E-34 T 09-03-2017 RG43_RS24960 c40328ef52ad31618c788c8952983280 185 Pfam PF01380 SIS domain 33 155 7.4E-13 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 RG43_RS24960 c40328ef52ad31618c788c8952983280 185 Gene3D G3DSA:3.40.50.10490 6 184 5.3E-42 T 09-03-2017 RG43_RS09170 3852aa44da3cc87ac6454e6408aaf558 308 SMART SM00382 26 212 5.8E-13 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS09170 3852aa44da3cc87ac6454e6408aaf558 308 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS09170 3852aa44da3cc87ac6454e6408aaf558 308 Gene3D G3DSA:3.10.580.10 265 305 3.2E-4 T 09-03-2017 RG43_RS09170 3852aa44da3cc87ac6454e6408aaf558 308 Gene3D G3DSA:3.40.50.300 1 235 2.0E-74 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS09170 3852aa44da3cc87ac6454e6408aaf558 308 SUPERFAMILY SSF54631 264 305 7.73E-6 T 09-03-2017 RG43_RS09170 3852aa44da3cc87ac6454e6408aaf558 308 SUPERFAMILY SSF52540 1 239 3.28E-74 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS09170 3852aa44da3cc87ac6454e6408aaf558 308 Pfam PF00005 ABC transporter 18 162 3.7E-30 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS16435 9dbf9ce8120b14c0c53088d087bd7f43 127 ProDom PD079626 YLIH RECEPTOR STY0893 CYTOPLASMIC 1 127 6.0E-61 T 09-03-2017 IPR020359 Biofilm regulator BssR RG43_RS16435 9dbf9ce8120b14c0c53088d087bd7f43 127 Pfam PF10799 Biofilm formation protein (YliH/bssR) 1 126 1.0E-75 T 09-03-2017 IPR020359 Biofilm regulator BssR RG43_RS08910 c8416414b0674870b00c6804909bda04 518 Gene3D G3DSA:3.20.20.450 267 512 2.4E-76 T 09-03-2017 IPR001633 EAL domain RG43_RS08910 c8416414b0674870b00c6804909bda04 518 SUPERFAMILY SSF141868 267 514 1.09E-72 T 09-03-2017 IPR001633 EAL domain RG43_RS08910 c8416414b0674870b00c6804909bda04 518 Pfam PF12792 CSS motif domain associated with EAL 42 239 6.0E-42 T 09-03-2017 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain RG43_RS08910 c8416414b0674870b00c6804909bda04 518 Pfam PF00563 EAL domain 267 500 6.5E-67 T 09-03-2017 IPR001633 EAL domain RG43_RS08910 c8416414b0674870b00c6804909bda04 518 SMART SM00052 260 505 2.2E-106 T 09-03-2017 IPR001633 EAL domain RG43_RS23320 777af84098a120aab0a33c6cb4269d71 107 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 58 100 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RG43_RS23320 777af84098a120aab0a33c6cb4269d71 107 SUPERFAMILY SSF46689 57 106 1.12E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS23320 777af84098a120aab0a33c6cb4269d71 107 Pfam PF12833 Helix-turn-helix domain 27 106 6.0E-24 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS23320 777af84098a120aab0a33c6cb4269d71 107 SUPERFAMILY SSF46689 4 56 2.09E-11 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS23320 777af84098a120aab0a33c6cb4269d71 107 Gene3D G3DSA:1.10.10.60 58 106 1.9E-20 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS23320 777af84098a120aab0a33c6cb4269d71 107 SMART SM00342 21 104 3.9E-34 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS23320 777af84098a120aab0a33c6cb4269d71 107 Gene3D G3DSA:1.10.10.60 1 57 1.4E-22 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS23320 777af84098a120aab0a33c6cb4269d71 107 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 1.8E-7 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RG43_RS23320 777af84098a120aab0a33c6cb4269d71 107 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 1.8E-7 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RG43_RS15340 00af6bddf100497ebe220d378f5e454c 385 Hamap MF_01066 Glucans biosynthesis protein C [mdoC]. 1 385 55.567 T 09-03-2017 IPR023723 Glucan biosynthesis protein C GO:0016741 RG43_RS15340 00af6bddf100497ebe220d378f5e454c 385 Pfam PF01757 Acyltransferase family 10 356 7.3E-42 T 09-03-2017 IPR002656 Acyltransferase 3 GO:0016747 RG43_RS14640 bd9f628cfa70fc8957ee48d5aafb806b 432 SUPERFAMILY SSF54373 269 359 7.85E-17 T 09-03-2017 RG43_RS14640 bd9f628cfa70fc8957ee48d5aafb806b 432 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 410 55.367 T 09-03-2017 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 RG43_RS14640 bd9f628cfa70fc8957ee48d5aafb806b 432 Gene3D G3DSA:3.40.50.720 353 415 5.8E-49 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS14640 bd9f628cfa70fc8957ee48d5aafb806b 432 Gene3D G3DSA:3.40.50.720 194 269 5.8E-49 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS14640 bd9f628cfa70fc8957ee48d5aafb806b 432 Gene3D G3DSA:3.40.50.720 1 96 5.8E-49 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS14640 bd9f628cfa70fc8957ee48d5aafb806b 432 SUPERFAMILY SSF51905 107 271 1.81E-52 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS14640 bd9f628cfa70fc8957ee48d5aafb806b 432 SUPERFAMILY SSF51905 1 54 1.81E-52 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS14640 bd9f628cfa70fc8957ee48d5aafb806b 432 SUPERFAMILY SSF51905 359 417 1.81E-52 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS14640 bd9f628cfa70fc8957ee48d5aafb806b 432 Gene3D G3DSA:3.30.9.10 135 193 3.9E-14 T 09-03-2017 RG43_RS14640 bd9f628cfa70fc8957ee48d5aafb806b 432 Gene3D G3DSA:3.30.9.10 270 352 3.9E-14 T 09-03-2017 RG43_RS14640 bd9f628cfa70fc8957ee48d5aafb806b 432 Pfam PF01266 FAD dependent oxidoreductase 2 397 1.9E-68 T 09-03-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RG43_RS26155 ef96bb0036977f7824976fbc7ab68f83 73 Pfam PF06174 Protein of unknown function (DUF987) 1 65 3.9E-36 T 09-03-2017 IPR009329 Protein of unknown function DUF987 RG43_RS26155 ef96bb0036977f7824976fbc7ab68f83 73 ProDom PD056719 YEET C0272 C4574 AEC74 ECS1404 C1284 INTERGENIC-REGION YKFH YPJJ 10 73 2.0E-32 T 09-03-2017 IPR009329 Protein of unknown function DUF987 RG43_RS03780 ef96bb0036977f7824976fbc7ab68f83 73 Pfam PF06174 Protein of unknown function (DUF987) 1 65 3.9E-36 T 09-03-2017 IPR009329 Protein of unknown function DUF987 RG43_RS03780 ef96bb0036977f7824976fbc7ab68f83 73 ProDom PD056719 YEET C0272 C4574 AEC74 ECS1404 C1284 INTERGENIC-REGION YKFH YPJJ 10 73 2.0E-32 T 09-03-2017 IPR009329 Protein of unknown function DUF987 RG43_RS03440 7318c090c1b50d35d0155e0a4c54e099 328 PIRSF PIRSF015753 5 324 7.2E-134 T 09-03-2017 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 RG43_RS03440 7318c090c1b50d35d0155e0a4c54e099 328 Pfam PF13409 Glutathione S-transferase, N-terminal domain 62 158 7.3E-23 T 09-03-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RG43_RS03440 7318c090c1b50d35d0155e0a4c54e099 328 Gene3D G3DSA:3.40.30.10 43 178 6.2E-19 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS03440 7318c090c1b50d35d0155e0a4c54e099 328 Pfam PF13410 Glutathione S-transferase, C-terminal domain 203 257 9.5E-13 T 09-03-2017 RG43_RS03440 7318c090c1b50d35d0155e0a4c54e099 328 Gene3D G3DSA:1.20.1050.10 179 289 2.8E-27 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like RG43_RS03440 7318c090c1b50d35d0155e0a4c54e099 328 SUPERFAMILY SSF52833 41 99 1.57E-14 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS03440 7318c090c1b50d35d0155e0a4c54e099 328 SUPERFAMILY SSF52833 126 162 1.57E-14 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS03440 7318c090c1b50d35d0155e0a4c54e099 328 SUPERFAMILY SSF47616 176 324 1.17E-35 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like RG43_RS20495 20c945ec571394c4d52b601e579dd4de 343 Pfam PF09383 NIL domain 268 339 7.7E-20 T 09-03-2017 IPR018449 NIL domain RG43_RS20495 20c945ec571394c4d52b601e579dd4de 343 SUPERFAMILY SSF52540 1 240 1.08E-85 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS20495 20c945ec571394c4d52b601e579dd4de 343 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS20495 20c945ec571394c4d52b601e579dd4de 343 Gene3D G3DSA:3.40.50.300 1 237 1.7E-85 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS20495 20c945ec571394c4d52b601e579dd4de 343 Gene3D G3DSA:3.30.70.260 238 343 1.1E-31 T 09-03-2017 RG43_RS20495 20c945ec571394c4d52b601e579dd4de 343 SMART SM00930 265 340 2.4E-24 T 09-03-2017 IPR018449 NIL domain RG43_RS20495 20c945ec571394c4d52b601e579dd4de 343 SMART SM00382 30 218 2.2E-15 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS20495 20c945ec571394c4d52b601e579dd4de 343 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 6.5E-212 T 09-03-2017 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 RG43_RS20495 20c945ec571394c4d52b601e579dd4de 343 Pfam PF00005 ABC transporter 21 169 5.2E-37 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS20495 20c945ec571394c4d52b601e579dd4de 343 SUPERFAMILY SSF55021 248 343 2.06E-26 T 09-03-2017 RG43_RS18305 febe8ddb3e28c86ee9188b1052657fab 102 SUPERFAMILY SSF56349 10 80 5.0E-17 T 09-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RG43_RS18305 febe8ddb3e28c86ee9188b1052657fab 102 Pfam PF00589 Phage integrase family 5 69 4.2E-14 T 09-03-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RG43_RS18305 febe8ddb3e28c86ee9188b1052657fab 102 Gene3D G3DSA:1.10.443.10 14 83 3.3E-16 T 09-03-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RG43_RS12965 52f066ede78ef687fd879024457ea579 511 SUPERFAMILY SSF52540 10 230 2.83E-55 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS12965 52f066ede78ef687fd879024457ea579 511 SUPERFAMILY SSF52540 263 483 7.4E-46 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS12965 52f066ede78ef687fd879024457ea579 511 ProSitePatterns PS00211 ABC transporters family signature. 404 418 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS12965 52f066ede78ef687fd879024457ea579 511 Gene3D G3DSA:3.40.50.300 10 232 1.1E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS12965 52f066ede78ef687fd879024457ea579 511 Gene3D G3DSA:3.40.50.300 279 484 6.2E-46 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS12965 52f066ede78ef687fd879024457ea579 511 SMART SM00382 288 480 2.7E-8 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS12965 52f066ede78ef687fd879024457ea579 511 SMART SM00382 36 217 2.9E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS12965 52f066ede78ef687fd879024457ea579 511 Pfam PF00005 ABC transporter 280 431 1.8E-21 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS12965 52f066ede78ef687fd879024457ea579 511 Pfam PF00005 ABC transporter 27 169 2.8E-26 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS23075 33281e9cb2afa7ff7c3ad151f1f161f4 241 Gene3D G3DSA:1.10.10.10 8 82 1.8E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS23075 33281e9cb2afa7ff7c3ad151f1f161f4 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 75 9.0E-22 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS23075 33281e9cb2afa7ff7c3ad151f1f161f4 241 SMART SM00866 96 236 3.9E-26 T 09-03-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RG43_RS23075 33281e9cb2afa7ff7c3ad151f1f161f4 241 Gene3D G3DSA:3.40.1410.10 83 241 2.1E-47 T 09-03-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RG43_RS23075 33281e9cb2afa7ff7c3ad151f1f161f4 241 SMART SM00345 17 75 1.6E-24 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS23075 33281e9cb2afa7ff7c3ad151f1f161f4 241 SUPERFAMILY SSF64288 63 240 1.44E-37 T 09-03-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RG43_RS23075 33281e9cb2afa7ff7c3ad151f1f161f4 241 Pfam PF07702 UTRA domain 96 235 1.4E-31 T 09-03-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RG43_RS23075 33281e9cb2afa7ff7c3ad151f1f161f4 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 1.9E-8 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS23075 33281e9cb2afa7ff7c3ad151f1f161f4 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 1.9E-8 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS23075 33281e9cb2afa7ff7c3ad151f1f161f4 241 SUPERFAMILY SSF46785 8 83 1.88E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS23075 33281e9cb2afa7ff7c3ad151f1f161f4 241 TIGRFAM TIGR02325 C_P_lyase_phnF: phosphonate metabolism transcriptional regulator PhnF 6 241 9.0E-105 T 09-03-2017 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF RG43_RS13650 caa39a0491daa8866b4791fc8e5efab3 377 SUPERFAMILY SSF56935 22 377 3.14E-87 T 09-03-2017 RG43_RS13650 caa39a0491daa8866b4791fc8e5efab3 377 Gene3D G3DSA:2.40.160.10 22 377 3.2E-110 T 09-03-2017 IPR023614 Porin domain RG43_RS13650 caa39a0491daa8866b4791fc8e5efab3 377 PRINTS PR00183 E.coli/Salmonella-type porin signature 244 261 4.6E-74 T 09-03-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 RG43_RS13650 caa39a0491daa8866b4791fc8e5efab3 377 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 4.6E-74 T 09-03-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 RG43_RS13650 caa39a0491daa8866b4791fc8e5efab3 377 PRINTS PR00183 E.coli/Salmonella-type porin signature 150 172 4.6E-74 T 09-03-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 RG43_RS13650 caa39a0491daa8866b4791fc8e5efab3 377 PRINTS PR00183 E.coli/Salmonella-type porin signature 95 117 4.6E-74 T 09-03-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 RG43_RS13650 caa39a0491daa8866b4791fc8e5efab3 377 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 4.6E-74 T 09-03-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 RG43_RS13650 caa39a0491daa8866b4791fc8e5efab3 377 PRINTS PR00183 E.coli/Salmonella-type porin signature 275 294 4.6E-74 T 09-03-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 RG43_RS13650 caa39a0491daa8866b4791fc8e5efab3 377 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 1.3E-18 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RG43_RS13650 caa39a0491daa8866b4791fc8e5efab3 377 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 95 105 1.3E-18 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RG43_RS13650 caa39a0491daa8866b4791fc8e5efab3 377 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 328 345 1.3E-18 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RG43_RS13650 caa39a0491daa8866b4791fc8e5efab3 377 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 238 250 1.3E-18 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RG43_RS13650 caa39a0491daa8866b4791fc8e5efab3 377 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 152 163 1.3E-18 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RG43_RS13650 caa39a0491daa8866b4791fc8e5efab3 377 Pfam PF00267 Gram-negative porin 27 377 5.1E-153 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RG43_RS13595 123fa54b0dd5c7bcc045e5a5e9468e0e 196 TIGRFAM TIGR02287 PaaY: phenylacetic acid degradation protein PaaY 3 195 5.9E-112 T 09-03-2017 IPR011974 Phenylacetic acid degradation protein PaaY RG43_RS13595 123fa54b0dd5c7bcc045e5a5e9468e0e 196 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 44 9.6E-5 T 09-03-2017 IPR001451 Hexapeptide repeat RG43_RS13595 123fa54b0dd5c7bcc045e5a5e9468e0e 196 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 88 122 1.0E-7 T 09-03-2017 IPR001451 Hexapeptide repeat RG43_RS13595 123fa54b0dd5c7bcc045e5a5e9468e0e 196 SUPERFAMILY SSF51161 2 167 8.04E-45 T 09-03-2017 IPR011004 Trimeric LpxA-like RG43_RS13595 123fa54b0dd5c7bcc045e5a5e9468e0e 196 Gene3D G3DSA:2.160.10.10 2 166 2.8E-41 T 09-03-2017 RG43_RS05495 268799a31344503df5f1b4a5acc9cc66 230 Gene3D G3DSA:3.40.50.1860 114 216 1.4E-32 T 09-03-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RG43_RS05495 268799a31344503df5f1b4a5acc9cc66 230 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 229 1.1E-61 T 09-03-2017 IPR004380 Aspartate racemase GO:0006520|GO:0016855 RG43_RS05495 268799a31344503df5f1b4a5acc9cc66 230 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 193 203 - T 09-03-2017 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RG43_RS05495 268799a31344503df5f1b4a5acc9cc66 230 SUPERFAMILY SSF53681 119 229 7.19E-31 T 09-03-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RG43_RS05495 268799a31344503df5f1b4a5acc9cc66 230 Gene3D G3DSA:3.40.50.1860 1 113 1.7E-44 T 09-03-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RG43_RS05495 268799a31344503df5f1b4a5acc9cc66 230 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 79 88 - T 09-03-2017 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RG43_RS05495 268799a31344503df5f1b4a5acc9cc66 230 SUPERFAMILY SSF53681 1 113 6.98E-36 T 09-03-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RG43_RS05495 268799a31344503df5f1b4a5acc9cc66 230 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 224 4.4E-55 T 09-03-2017 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RG43_RS11640 a1dd3c3837838b0010e77a7222604a19 536 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 14 499 1.6E-119 T 09-03-2017 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 RG43_RS11640 a1dd3c3837838b0010e77a7222604a19 536 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 55 499 3.9E-165 T 09-03-2017 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 RG43_RS11640 a1dd3c3837838b0010e77a7222604a19 536 ProSitePatterns PS01303 BCCT family of transporters signature. 312 321 - T 09-03-2017 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 RG43_RS05210 ecae0ffd66550d21aef1b70e4126315d 200 SUPERFAMILY SSF100950 12 200 4.05E-57 T 09-03-2017 RG43_RS05210 ecae0ffd66550d21aef1b70e4126315d 200 PIRSF PIRSF006806 9 197 2.1E-36 T 09-03-2017 IPR002698 5-formyltetrahydrofolate cyclo-ligase RG43_RS05210 ecae0ffd66550d21aef1b70e4126315d 200 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 13 194 4.7E-53 T 09-03-2017 IPR002698 5-formyltetrahydrofolate cyclo-ligase RG43_RS05210 ecae0ffd66550d21aef1b70e4126315d 200 Gene3D G3DSA:3.40.50.10420 13 199 9.9E-61 T 09-03-2017 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain RG43_RS05210 ecae0ffd66550d21aef1b70e4126315d 200 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 13 194 8.3E-45 T 09-03-2017 IPR002698 5-formyltetrahydrofolate cyclo-ligase RG43_RS23445 b7e8aa06376d2fc8647a9229efe067f8 165 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 12 165 25.759 T 09-03-2017 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148 RG43_RS23445 b7e8aa06376d2fc8647a9229efe067f8 165 Gene3D G3DSA:3.40.1410.10 3 165 7.6E-58 T 09-03-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RG43_RS23445 b7e8aa06376d2fc8647a9229efe067f8 165 Pfam PF04345 Chorismate lyase 16 165 5.7E-31 T 09-03-2017 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148 RG43_RS23445 b7e8aa06376d2fc8647a9229efe067f8 165 SUPERFAMILY SSF64288 6 165 1.27E-46 T 09-03-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RG43_RS17735 958ba29334f789f470d07397b634d739 406 Pfam PF00480 ROK family 89 392 2.4E-102 T 09-03-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 RG43_RS17735 958ba29334f789f470d07397b634d739 406 SUPERFAMILY SSF53067 88 394 8.64E-56 T 09-03-2017 RG43_RS17735 958ba29334f789f470d07397b634d739 406 Pfam PF01047 MarR family 25 63 5.5E-7 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RG43_RS17735 958ba29334f789f470d07397b634d739 406 ProSitePatterns PS01125 ROK family signature. 220 247 - T 09-03-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 RG43_RS17735 958ba29334f789f470d07397b634d739 406 Gene3D G3DSA:1.10.10.10 14 79 2.9E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS17735 958ba29334f789f470d07397b634d739 406 Gene3D G3DSA:3.30.420.40 225 376 1.0E-47 T 09-03-2017 RG43_RS17735 958ba29334f789f470d07397b634d739 406 Gene3D G3DSA:3.30.420.40 85 224 2.4E-34 T 09-03-2017 RG43_RS17735 958ba29334f789f470d07397b634d739 406 SUPERFAMILY SSF46785 14 79 5.25E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS03175 310d9d373e930e0ee0fe2c91ac802b20 335 Pfam PF00296 Luciferase-like monooxygenase 20 300 7.9E-35 T 09-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RG43_RS03175 310d9d373e930e0ee0fe2c91ac802b20 335 Gene3D G3DSA:3.20.20.30 2 327 5.3E-90 T 09-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RG43_RS03175 310d9d373e930e0ee0fe2c91ac802b20 335 SUPERFAMILY SSF51679 7 328 8.6E-87 T 09-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RG43_RS03175 310d9d373e930e0ee0fe2c91ac802b20 335 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 8 327 3.8E-133 T 09-03-2017 IPR019949 Luciferase family oxidoreductase, group 1 RG43_RS22525 9b83bf0af54ec41ccc44a3b7592cf45c 91 SUPERFAMILY SSF159871 3 91 1.24E-23 T 09-03-2017 IPR010854 Domain of unknown function DUF1471 RG43_RS22525 9b83bf0af54ec41ccc44a3b7592cf45c 91 Pfam PF07338 Protein of unknown function (DUF1471) 36 91 1.5E-18 T 09-03-2017 IPR010854 Domain of unknown function DUF1471 RG43_RS22525 9b83bf0af54ec41ccc44a3b7592cf45c 91 Gene3D G3DSA:3.30.1660.10 23 91 5.5E-25 T 09-03-2017 IPR025543 Dodecin-like RG43_RS15520 00f09868b34c473e68b83607d124e339 164 Pfam PF01613 Flavin reductase like domain 13 159 8.9E-29 T 09-03-2017 IPR002563 Flavin reductase like domain GO:0010181 RG43_RS15520 00f09868b34c473e68b83607d124e339 164 Hamap MF_00833 FMN reductase (NADH) RutF [rutF]. 1 164 43.011 T 09-03-2017 IPR019917 FMN reductase (NADH) RutF GO:0008752|GO:0055114 KEGG: 00740+1.5.1.42|MetaCyc: PWY-7723 RG43_RS15520 00f09868b34c473e68b83607d124e339 164 SUPERFAMILY SSF50475 1 161 6.38E-44 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 RG43_RS15520 00f09868b34c473e68b83607d124e339 164 SMART SM00903 13 158 2.5E-50 T 09-03-2017 IPR002563 Flavin reductase like domain GO:0010181 RG43_RS15520 00f09868b34c473e68b83607d124e339 164 TIGRFAM TIGR03615 RutF: pyrimidine utilization flavin reductase protein F 4 159 3.6E-86 T 09-03-2017 IPR019917 FMN reductase (NADH) RutF GO:0008752|GO:0055114 KEGG: 00740+1.5.1.42|MetaCyc: PWY-7723 RG43_RS15520 00f09868b34c473e68b83607d124e339 164 Gene3D G3DSA:2.30.110.10 3 157 3.9E-51 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 RG43_RS12885 97dcfd639ba3467d1eca5597a9519d83 396 Hamap MF_00517 Probable sugar efflux transporter [sotB]. 1 390 29.99 T 09-03-2017 IPR023495 Sugar efflux transporter, putative RG43_RS12885 97dcfd639ba3467d1eca5597a9519d83 396 Gene3D G3DSA:1.20.1250.20 207 387 2.1E-12 T 09-03-2017 RG43_RS12885 97dcfd639ba3467d1eca5597a9519d83 396 Pfam PF07690 Major Facilitator Superfamily 19 348 5.5E-33 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS12885 97dcfd639ba3467d1eca5597a9519d83 396 Gene3D G3DSA:1.20.1250.20 8 195 1.0E-27 T 09-03-2017 RG43_RS12885 97dcfd639ba3467d1eca5597a9519d83 396 SUPERFAMILY SSF103473 5 386 1.01E-53 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS08440 65e448ea0e73754b46602b8678c16bef 431 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 93 427 5.4E-108 T 09-03-2017 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 RG43_RS08440 65e448ea0e73754b46602b8678c16bef 431 Pfam PF00425 chorismate binding enzyme 169 420 1.2E-62 T 09-03-2017 IPR015890 Chorismate-utilising enzyme, C-terminal RG43_RS08440 65e448ea0e73754b46602b8678c16bef 431 SUPERFAMILY SSF56322 12 428 1.7E-104 T 09-03-2017 IPR005801 ADC synthase GO:0009058 RG43_RS08440 65e448ea0e73754b46602b8678c16bef 431 Hamap MF_01935 Isochorismate synthase MenF [menF]. 7 430 42.191 T 09-03-2017 RG43_RS08440 65e448ea0e73754b46602b8678c16bef 431 Gene3D G3DSA:3.60.120.10 38 429 7.1E-80 T 09-03-2017 IPR005801 ADC synthase GO:0009058 RG43_RS26830 311b2cbfb0fb05ac9ca4d9e8e38add45 201 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 6 195 2.6E-51 T 09-03-2017 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 RG43_RS26830 311b2cbfb0fb05ac9ca4d9e8e38add45 201 Gene3D G3DSA:2.10.70.20 151 198 4.5E-22 T 09-03-2017 RG43_RS26830 311b2cbfb0fb05ac9ca4d9e8e38add45 201 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS26830 311b2cbfb0fb05ac9ca4d9e8e38add45 201 Pfam PF11612 Type II secretion system (T2SS), protein J 58 193 3.9E-34 T 09-03-2017 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 RG43_RS26830 311b2cbfb0fb05ac9ca4d9e8e38add45 201 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 4.5E-7 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS26830 311b2cbfb0fb05ac9ca4d9e8e38add45 201 Gene3D G3DSA:3.10.610.10 38 148 2.6E-42 T 09-03-2017 RG43_RS26830 311b2cbfb0fb05ac9ca4d9e8e38add45 201 Pfam PF13633 Prokaryotic N-terminal methylation site 6 27 7.6E-8 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS26830 311b2cbfb0fb05ac9ca4d9e8e38add45 201 SUPERFAMILY SSF54523 46 197 5.81E-44 T 09-03-2017 RG43_RS04455 311b2cbfb0fb05ac9ca4d9e8e38add45 201 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 6 195 2.6E-51 T 09-03-2017 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 RG43_RS04455 311b2cbfb0fb05ac9ca4d9e8e38add45 201 Gene3D G3DSA:2.10.70.20 151 198 4.5E-22 T 09-03-2017 RG43_RS04455 311b2cbfb0fb05ac9ca4d9e8e38add45 201 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS04455 311b2cbfb0fb05ac9ca4d9e8e38add45 201 Pfam PF11612 Type II secretion system (T2SS), protein J 58 193 3.9E-34 T 09-03-2017 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 RG43_RS04455 311b2cbfb0fb05ac9ca4d9e8e38add45 201 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 4.5E-7 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS04455 311b2cbfb0fb05ac9ca4d9e8e38add45 201 Gene3D G3DSA:3.10.610.10 38 148 2.6E-42 T 09-03-2017 RG43_RS04455 311b2cbfb0fb05ac9ca4d9e8e38add45 201 Pfam PF13633 Prokaryotic N-terminal methylation site 6 27 7.6E-8 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS04455 311b2cbfb0fb05ac9ca4d9e8e38add45 201 SUPERFAMILY SSF54523 46 197 5.81E-44 T 09-03-2017 RG43_RS20545 a5e1a449c296823cae8218529b66f143 181 Gene3D G3DSA:3.10.640.10 1 179 3.8E-82 T 09-03-2017 RG43_RS20545 a5e1a449c296823cae8218529b66f143 181 PIRSF PIRSF011484 1 180 6.2E-66 T 09-03-2017 IPR009822 YaeQ RG43_RS20545 a5e1a449c296823cae8218529b66f143 181 SUPERFAMILY SSF52980 4 178 8.58E-70 T 09-03-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 RG43_RS20545 a5e1a449c296823cae8218529b66f143 181 SMART SM01322 1 176 2.4E-111 T 09-03-2017 IPR009822 YaeQ RG43_RS20545 a5e1a449c296823cae8218529b66f143 181 Pfam PF07152 YaeQ protein 1 173 2.5E-72 T 09-03-2017 IPR009822 YaeQ RG43_RS03405 b23bfba105cff2cf346fcde2ce9844f6 436 PIRSF PIRSF006054 5 435 3.4E-184 T 09-03-2017 IPR021144 Uncharacterised protein family UPF0597 RG43_RS03405 b23bfba105cff2cf346fcde2ce9844f6 436 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 9 433 35.134 T 09-03-2017 IPR021144 Uncharacterised protein family UPF0597 RG43_RS03405 b23bfba105cff2cf346fcde2ce9844f6 436 Pfam PF03313 Serine dehydratase alpha chain 178 428 3.4E-48 T 09-03-2017 IPR005130 Serine dehydratase-like, alpha subunit RG43_RS19705 89d2e5bbf029c4dc6deca5c24b1573aa 480 Pfam PF03797 Autotransporter beta-domain 219 466 2.3E-30 T 09-03-2017 IPR005546 Autotransporter beta-domain RG43_RS19705 89d2e5bbf029c4dc6deca5c24b1573aa 480 SUPERFAMILY SSF51126 9 177 1.24E-27 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor RG43_RS19705 89d2e5bbf029c4dc6deca5c24b1573aa 480 SMART SM00869 218 469 3.8E-30 T 09-03-2017 IPR005546 Autotransporter beta-domain RG43_RS19705 89d2e5bbf029c4dc6deca5c24b1573aa 480 Gene3D G3DSA:2.160.20.20 5 150 5.4E-24 T 09-03-2017 IPR012332 P22 tailspike C-terminal domain-like RG43_RS19705 89d2e5bbf029c4dc6deca5c24b1573aa 480 Gene3D G3DSA:2.40.128.130 185 480 1.9E-79 T 09-03-2017 IPR005546 Autotransporter beta-domain RG43_RS19705 89d2e5bbf029c4dc6deca5c24b1573aa 480 SUPERFAMILY SSF103515 199 480 1.09E-41 T 09-03-2017 IPR005546 Autotransporter beta-domain RG43_RS19705 89d2e5bbf029c4dc6deca5c24b1573aa 480 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 71 480 3.6E-65 T 09-03-2017 IPR006315 Outer membrane autotransporter barrel GO:0019867 RG43_RS13425 1affcc4e5d8b9bf50f1b66443e84b087 403 TIGRFAM TIGR00843 benE: benzoate transporter 1 395 3.2E-217 T 09-03-2017 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 RG43_RS13425 1affcc4e5d8b9bf50f1b66443e84b087 403 Pfam PF03594 Benzoate membrane transport protein 19 394 2.0E-154 T 09-03-2017 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 RG43_RS16705 0b2dfd3bf3d80bcdda43db7fa92a7cfd 413 SUPERFAMILY SSF56024 4 162 1.44E-39 T 09-03-2017 RG43_RS16705 0b2dfd3bf3d80bcdda43db7fa92a7cfd 413 Pfam PF13091 PLD-like domain 214 335 2.2E-25 T 09-03-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 RG43_RS16705 0b2dfd3bf3d80bcdda43db7fa92a7cfd 413 Pfam PF13091 PLD-like domain 26 142 1.6E-14 T 09-03-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 RG43_RS16705 0b2dfd3bf3d80bcdda43db7fa92a7cfd 413 Gene3D G3DSA:3.30.870.10 206 363 4.8E-33 T 09-03-2017 RG43_RS16705 0b2dfd3bf3d80bcdda43db7fa92a7cfd 413 Gene3D G3DSA:3.30.870.10 4 167 9.0E-40 T 09-03-2017 RG43_RS16705 0b2dfd3bf3d80bcdda43db7fa92a7cfd 413 SMART SM00155 285 312 10.0 T 09-03-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 RG43_RS16705 0b2dfd3bf3d80bcdda43db7fa92a7cfd 413 SMART SM00155 108 135 1.8E-6 T 09-03-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 RG43_RS16705 0b2dfd3bf3d80bcdda43db7fa92a7cfd 413 SUPERFAMILY SSF56024 188 358 5.61E-38 T 09-03-2017 RG43_RS16705 0b2dfd3bf3d80bcdda43db7fa92a7cfd 413 Hamap MF_01917 Cardiolipin synthase B [clsB]. 2 383 52.115 T 09-03-2017 IPR030872 Cardiolipin synthase B GO:0008808|GO:0032049 RG43_RS22060 00eebdd42e8caf33a99bcf38819420f8 212 SUPERFAMILY SSF49401 64 212 1.34E-34 T 09-03-2017 IPR008966 Adhesion domain RG43_RS22060 00eebdd42e8caf33a99bcf38819420f8 212 Pfam PF00419 Fimbrial protein 66 212 5.9E-21 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS22060 00eebdd42e8caf33a99bcf38819420f8 212 Gene3D G3DSA:2.60.40.1090 63 212 3.5E-38 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS08445 2f034cd8d5b0cbe9778470442ac8b294 556 Gene3D G3DSA:3.40.50.970 332 547 1.0E-33 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS08445 2f034cd8d5b0cbe9778470442ac8b294 556 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 415 535 6.5E-10 T 09-03-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RG43_RS08445 2f034cd8d5b0cbe9778470442ac8b294 556 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 141 6.9E-27 T 09-03-2017 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 RG43_RS08445 2f034cd8d5b0cbe9778470442ac8b294 556 Gene3D G3DSA:3.40.50.970 7 175 3.9E-44 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS08445 2f034cd8d5b0cbe9778470442ac8b294 556 SUPERFAMILY SSF52518 7 175 9.64E-32 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS08445 2f034cd8d5b0cbe9778470442ac8b294 556 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 10 430 4.5E-140 T 09-03-2017 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 RG43_RS08445 2f034cd8d5b0cbe9778470442ac8b294 556 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 4 553 32.875 T 09-03-2017 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 RG43_RS08445 2f034cd8d5b0cbe9778470442ac8b294 556 Pfam PF16582 Middle domain of thiamine pyrophosphate 184 388 2.1E-87 T 09-03-2017 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 RG43_RS08445 2f034cd8d5b0cbe9778470442ac8b294 556 PIRSF PIRSF004983 1 556 2.0E-187 T 09-03-2017 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 RG43_RS08445 2f034cd8d5b0cbe9778470442ac8b294 556 SUPERFAMILY SSF52518 367 552 3.19E-35 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS05745 66f16b71b64049055380739382130e95 166 PIRSF PIRSF028301 1 166 4.3E-54 T 09-03-2017 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 RG43_RS05745 66f16b71b64049055380739382130e95 166 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 7 157 5.4E-52 T 09-03-2017 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 RG43_RS05745 66f16b71b64049055380739382130e95 166 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 5 158 1.2E-48 T 09-03-2017 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 RG43_RS19310 ad055e8f8f4d2c0c8f068470bdea4ecd 427 Gene3D G3DSA:3.20.20.140 66 367 4.9E-127 T 09-03-2017 RG43_RS19310 ad055e8f8f4d2c0c8f068470bdea4ecd 427 Pfam PF07969 Amidohydrolase family 48 405 4.8E-57 T 09-03-2017 IPR013108 Amidohydrolase 3 RG43_RS19310 ad055e8f8f4d2c0c8f068470bdea4ecd 427 Gene3D G3DSA:2.30.40.10 22 65 3.4E-6 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RG43_RS19310 ad055e8f8f4d2c0c8f068470bdea4ecd 427 SUPERFAMILY SSF51556 57 376 3.72E-109 T 09-03-2017 IPR032466 Metal-dependent hydrolase RG43_RS19310 ad055e8f8f4d2c0c8f068470bdea4ecd 427 SUPERFAMILY SSF51338 6 65 5.5E-14 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RG43_RS07420 de3ed717d2416bcd751532bbd3003c0f 1037 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 2.0E-110 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS07420 de3ed717d2416bcd751532bbd3003c0f 1037 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.0E-110 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS07420 de3ed717d2416bcd751532bbd3003c0f 1037 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 2.0E-110 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS07420 de3ed717d2416bcd751532bbd3003c0f 1037 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.0E-110 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS07420 de3ed717d2416bcd751532bbd3003c0f 1037 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 2.0E-110 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS07420 de3ed717d2416bcd751532bbd3003c0f 1037 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 2.0E-110 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS07420 de3ed717d2416bcd751532bbd3003c0f 1037 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.0E-110 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS07420 de3ed717d2416bcd751532bbd3003c0f 1037 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 2.0E-110 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS07420 de3ed717d2416bcd751532bbd3003c0f 1037 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.0E-110 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS07420 de3ed717d2416bcd751532bbd3003c0f 1037 SUPERFAMILY SSF82866 296 497 1.44E-47 T 09-03-2017 RG43_RS07420 de3ed717d2416bcd751532bbd3003c0f 1037 SUPERFAMILY SSF82714 182 272 1.7E-21 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RG43_RS07420 de3ed717d2416bcd751532bbd3003c0f 1037 Gene3D G3DSA:1.20.1640.10 292 506 7.1E-57 T 09-03-2017 RG43_RS07420 de3ed717d2416bcd751532bbd3003c0f 1037 SUPERFAMILY SSF82693 566 672 7.32E-29 T 09-03-2017 RG43_RS07420 de3ed717d2416bcd751532bbd3003c0f 1037 Gene3D G3DSA:3.30.2090.10 181 275 3.6E-27 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RG43_RS07420 de3ed717d2416bcd751532bbd3003c0f 1037 Gene3D G3DSA:3.30.2090.10 722 811 1.4E-28 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RG43_RS07420 de3ed717d2416bcd751532bbd3003c0f 1037 Gene3D G3DSA:1.10.3850.10 815 1028 2.6E-56 T 09-03-2017 RG43_RS07420 de3ed717d2416bcd751532bbd3003c0f 1037 Gene3D G3DSA:3.30.70.1430 39 139 2.5E-34 T 09-03-2017 RG43_RS07420 de3ed717d2416bcd751532bbd3003c0f 1037 SUPERFAMILY SSF82693 138 182 1.46E-24 T 09-03-2017 RG43_RS07420 de3ed717d2416bcd751532bbd3003c0f 1037 SUPERFAMILY SSF82693 274 330 1.46E-24 T 09-03-2017 RG43_RS07420 de3ed717d2416bcd751532bbd3003c0f 1037 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1034 0.0 T 09-03-2017 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 RG43_RS07420 de3ed717d2416bcd751532bbd3003c0f 1037 SUPERFAMILY SSF82693 39 132 4.53E-27 T 09-03-2017 RG43_RS07420 de3ed717d2416bcd751532bbd3003c0f 1037 SUPERFAMILY SSF82866 807 1030 1.19E-44 T 09-03-2017 RG43_RS07420 de3ed717d2416bcd751532bbd3003c0f 1037 Pfam PF00873 AcrB/AcrD/AcrF family 1 1027 0.0 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS07420 de3ed717d2416bcd751532bbd3003c0f 1037 Gene3D G3DSA:3.30.70.1430 568 672 5.8E-34 T 09-03-2017 RG43_RS07420 de3ed717d2416bcd751532bbd3003c0f 1037 SUPERFAMILY SSF82714 723 809 5.36E-23 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RG43_RS13860 9b875f158a8efa9d47cded8a23df00bd 73 TIGRFAM TIGR02979 phageshock_pspD: phage shock protein PspD 13 71 8.7E-36 T 09-03-2017 IPR014321 Phage shock protein, PspD RG43_RS13860 9b875f158a8efa9d47cded8a23df00bd 73 Pfam PF09584 Phage shock protein PspD (Phageshock_PspD) 11 71 7.2E-32 T 09-03-2017 IPR014321 Phage shock protein, PspD RG43_RS07000 9e83d87224006aa40a7a0ca74dd0e493 1093 SUPERFAMILY SSF48452 892 1009 8.47E-6 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS07000 9e83d87224006aa40a7a0ca74dd0e493 1093 SUPERFAMILY SSF48452 736 813 2.44E-13 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS07000 9e83d87224006aa40a7a0ca74dd0e493 1093 SUPERFAMILY SSF48452 571 607 2.44E-13 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS07000 9e83d87224006aa40a7a0ca74dd0e493 1093 SMART SM00028 778 812 34.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 RG43_RS07000 9e83d87224006aa40a7a0ca74dd0e493 1093 SMART SM00028 495 528 92.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 RG43_RS07000 9e83d87224006aa40a7a0ca74dd0e493 1093 SMART SM00028 569 602 0.15 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 RG43_RS07000 9e83d87224006aa40a7a0ca74dd0e493 1093 SMART SM00028 535 568 73.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 RG43_RS07000 9e83d87224006aa40a7a0ca74dd0e493 1093 SMART SM00028 744 777 0.44 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 RG43_RS07000 9e83d87224006aa40a7a0ca74dd0e493 1093 Gene3D G3DSA:1.25.40.10 896 1010 6.1E-4 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS07000 9e83d87224006aa40a7a0ca74dd0e493 1093 Gene3D G3DSA:1.25.40.10 736 818 1.8E-11 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS07000 9e83d87224006aa40a7a0ca74dd0e493 1093 SUPERFAMILY SSF48452 484 623 5.06E-17 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS07000 9e83d87224006aa40a7a0ca74dd0e493 1093 Gene3D G3DSA:1.25.40.10 482 640 6.7E-17 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS07000 9e83d87224006aa40a7a0ca74dd0e493 1093 Pfam PF17128 Domain of unknown function (DUF5107) 39 343 2.1E-68 T 09-03-2017 IPR033396 Domain of unknown function DUF5107 RG43_RS07000 9e83d87224006aa40a7a0ca74dd0e493 1093 Pfam PF13432 Tetratricopeptide repeat 754 813 0.0063 T 09-03-2017 RG43_RS07000 9e83d87224006aa40a7a0ca74dd0e493 1093 Pfam PF13432 Tetratricopeptide repeat 542 602 8.1E-4 T 09-03-2017 RG43_RS08705 88c292dd87d69354a5c7984dc25e29fc 375 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 327 343 - T 09-03-2017 IPR013793 Porin, Gram-negative type, conserved site RG43_RS08705 88c292dd87d69354a5c7984dc25e29fc 375 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 327 344 9.8E-19 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RG43_RS08705 88c292dd87d69354a5c7984dc25e29fc 375 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 9.8E-19 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RG43_RS08705 88c292dd87d69354a5c7984dc25e29fc 375 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 94 104 9.8E-19 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RG43_RS08705 88c292dd87d69354a5c7984dc25e29fc 375 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 150 161 9.8E-19 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RG43_RS08705 88c292dd87d69354a5c7984dc25e29fc 375 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 243 255 9.8E-19 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RG43_RS08705 88c292dd87d69354a5c7984dc25e29fc 375 PRINTS PR00183 E.coli/Salmonella-type porin signature 249 266 2.7E-72 T 09-03-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 RG43_RS08705 88c292dd87d69354a5c7984dc25e29fc 375 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 2.7E-72 T 09-03-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 RG43_RS08705 88c292dd87d69354a5c7984dc25e29fc 375 PRINTS PR00183 E.coli/Salmonella-type porin signature 94 116 2.7E-72 T 09-03-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 RG43_RS08705 88c292dd87d69354a5c7984dc25e29fc 375 PRINTS PR00183 E.coli/Salmonella-type porin signature 148 170 2.7E-72 T 09-03-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 RG43_RS08705 88c292dd87d69354a5c7984dc25e29fc 375 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 2.7E-72 T 09-03-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 RG43_RS08705 88c292dd87d69354a5c7984dc25e29fc 375 PRINTS PR00183 E.coli/Salmonella-type porin signature 278 297 2.7E-72 T 09-03-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 RG43_RS08705 88c292dd87d69354a5c7984dc25e29fc 375 SUPERFAMILY SSF56935 22 375 3.66E-77 T 09-03-2017 RG43_RS08705 88c292dd87d69354a5c7984dc25e29fc 375 Pfam PF00267 Gram-negative porin 27 375 3.5E-148 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RG43_RS08705 88c292dd87d69354a5c7984dc25e29fc 375 Gene3D G3DSA:2.40.160.10 22 375 1.2E-100 T 09-03-2017 IPR023614 Porin domain RG43_RS11275 a48ece5c8d4b724f879abaeaa387af9f 480 Gene3D G3DSA:2.40.33.10 77 170 1.7E-27 T 09-03-2017 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RG43_RS11275 a48ece5c8d4b724f879abaeaa387af9f 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 479 8.2E-176 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RG43_RS11275 a48ece5c8d4b724f879abaeaa387af9f 480 Gene3D G3DSA:3.20.20.60 172 331 1.3E-93 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RG43_RS11275 a48ece5c8d4b724f879abaeaa387af9f 480 Gene3D G3DSA:3.20.20.60 6 76 1.3E-93 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RG43_RS11275 a48ece5c8d4b724f879abaeaa387af9f 480 SUPERFAMILY SSF52935 329 479 2.35E-39 T 09-03-2017 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RG43_RS11275 a48ece5c8d4b724f879abaeaa387af9f 480 PRINTS PR01050 Pyruvate kinase family signature 300 318 4.2E-51 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RG43_RS11275 a48ece5c8d4b724f879abaeaa387af9f 480 PRINTS PR01050 Pyruvate kinase family signature 319 335 4.2E-51 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RG43_RS11275 a48ece5c8d4b724f879abaeaa387af9f 480 PRINTS PR01050 Pyruvate kinase family signature 63 79 4.2E-51 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RG43_RS11275 a48ece5c8d4b724f879abaeaa387af9f 480 PRINTS PR01050 Pyruvate kinase family signature 275 299 4.2E-51 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RG43_RS11275 a48ece5c8d4b724f879abaeaa387af9f 480 PRINTS PR01050 Pyruvate kinase family signature 250 274 4.2E-51 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RG43_RS11275 a48ece5c8d4b724f879abaeaa387af9f 480 PRINTS PR01050 Pyruvate kinase family signature 190 204 4.2E-51 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RG43_RS11275 a48ece5c8d4b724f879abaeaa387af9f 480 PRINTS PR01050 Pyruvate kinase family signature 223 249 4.2E-51 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RG43_RS11275 a48ece5c8d4b724f879abaeaa387af9f 480 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 09-03-2017 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RG43_RS11275 a48ece5c8d4b724f879abaeaa387af9f 480 Pfam PF00224 Pyruvate kinase, barrel domain 6 344 6.7E-131 T 09-03-2017 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RG43_RS11275 a48ece5c8d4b724f879abaeaa387af9f 480 SUPERFAMILY SSF50800 74 168 1.74E-24 T 09-03-2017 IPR011037 Pyruvate kinase-like, insert domain RG43_RS11275 a48ece5c8d4b724f879abaeaa387af9f 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 477 2.0E-29 T 09-03-2017 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RG43_RS11275 a48ece5c8d4b724f879abaeaa387af9f 480 SUPERFAMILY SSF51621 3 78 2.02E-86 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RG43_RS11275 a48ece5c8d4b724f879abaeaa387af9f 480 SUPERFAMILY SSF51621 160 345 2.02E-86 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RG43_RS11275 a48ece5c8d4b724f879abaeaa387af9f 480 Gene3D G3DSA:3.40.1380.20 332 480 1.3E-39 T 09-03-2017 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RG43_RS16930 8e21bdbba9900a9668c1d61370d45151 68 Pfam PF02831 gpW 1 67 3.5E-34 T 09-03-2017 IPR004174 Head-to-tail joining protein W, GpW GO:0019058 RG43_RS16930 8e21bdbba9900a9668c1d61370d45151 68 ProDom PD019366 PROPHAGE HEAD JOINING GP3 COMPLETION HEAD-TO-TAIL W PROPHAGE-DERIVED DNA HEAD-TAIL 23 65 6.0E-18 T 09-03-2017 IPR004174 Head-to-tail joining protein W, GpW GO:0019058 RG43_RS16930 8e21bdbba9900a9668c1d61370d45151 68 SUPERFAMILY SSF64210 1 57 5.75E-24 T 09-03-2017 IPR004174 Head-to-tail joining protein W, GpW GO:0019058 RG43_RS16930 8e21bdbba9900a9668c1d61370d45151 68 Gene3D G3DSA:3.30.1580.10 1 67 6.3E-33 T 09-03-2017 IPR004174 Head-to-tail joining protein W, GpW GO:0019058 RG43_RS04430 3a38e7e8a7ac860f0f3cda9aeb6e02a2 497 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 317 331 - T 09-03-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RG43_RS04430 3a38e7e8a7ac860f0f3cda9aeb6e02a2 497 Gene3D G3DSA:3.40.50.300 228 494 1.8E-100 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS04430 3a38e7e8a7ac860f0f3cda9aeb6e02a2 497 Pfam PF00437 Type II/IV secretion system protein 124 389 3.9E-88 T 09-03-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RG43_RS04430 3a38e7e8a7ac860f0f3cda9aeb6e02a2 497 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 14 494 1.2E-212 T 09-03-2017 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 RG43_RS04430 3a38e7e8a7ac860f0f3cda9aeb6e02a2 497 Gene3D G3DSA:3.30.450.90 93 222 1.3E-53 T 09-03-2017 RG43_RS04430 3a38e7e8a7ac860f0f3cda9aeb6e02a2 497 SUPERFAMILY SSF160246 13 76 1.26E-13 T 09-03-2017 RG43_RS04430 3a38e7e8a7ac860f0f3cda9aeb6e02a2 497 SUPERFAMILY SSF52540 106 494 9.98E-104 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS04430 3a38e7e8a7ac860f0f3cda9aeb6e02a2 497 SMART SM00382 250 373 0.0065 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS26805 3a38e7e8a7ac860f0f3cda9aeb6e02a2 497 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 317 331 - T 09-03-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RG43_RS26805 3a38e7e8a7ac860f0f3cda9aeb6e02a2 497 Gene3D G3DSA:3.40.50.300 228 494 1.8E-100 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS26805 3a38e7e8a7ac860f0f3cda9aeb6e02a2 497 Pfam PF00437 Type II/IV secretion system protein 124 389 3.9E-88 T 09-03-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RG43_RS26805 3a38e7e8a7ac860f0f3cda9aeb6e02a2 497 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 14 494 1.2E-212 T 09-03-2017 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 RG43_RS26805 3a38e7e8a7ac860f0f3cda9aeb6e02a2 497 Gene3D G3DSA:3.30.450.90 93 222 1.3E-53 T 09-03-2017 RG43_RS26805 3a38e7e8a7ac860f0f3cda9aeb6e02a2 497 SUPERFAMILY SSF160246 13 76 1.26E-13 T 09-03-2017 RG43_RS26805 3a38e7e8a7ac860f0f3cda9aeb6e02a2 497 SUPERFAMILY SSF52540 106 494 9.98E-104 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS26805 3a38e7e8a7ac860f0f3cda9aeb6e02a2 497 SMART SM00382 250 373 0.0065 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS14510 460d36e0bd23b4d8f2ebf96f9310bd88 283 PIRSF PIRSF010376 1 283 1.6E-85 T 09-03-2017 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 RG43_RS14510 460d36e0bd23b4d8f2ebf96f9310bd88 283 Pfam PF08544 GHMP kinases C terminal 213 263 2.2E-6 T 09-03-2017 IPR013750 GHMP kinase, C-terminal domain RG43_RS14510 460d36e0bd23b4d8f2ebf96f9310bd88 283 Gene3D G3DSA:3.30.230.10 4 163 1.4E-54 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RG43_RS14510 460d36e0bd23b4d8f2ebf96f9310bd88 283 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 1 282 5.4E-125 T 09-03-2017 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 RG43_RS14510 460d36e0bd23b4d8f2ebf96f9310bd88 283 Pfam PF00288 GHMP kinases N terminal domain 91 148 1.3E-10 T 09-03-2017 IPR006204 GHMP kinase N-terminal domain GO:0005524 RG43_RS14510 460d36e0bd23b4d8f2ebf96f9310bd88 283 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 3 275 32.728 T 09-03-2017 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 RG43_RS14510 460d36e0bd23b4d8f2ebf96f9310bd88 283 Gene3D G3DSA:3.30.70.890 166 281 1.6E-45 T 09-03-2017 IPR013750 GHMP kinase, C-terminal domain RG43_RS14510 460d36e0bd23b4d8f2ebf96f9310bd88 283 SUPERFAMILY SSF55060 164 281 6.98E-37 T 09-03-2017 IPR013750 GHMP kinase, C-terminal domain RG43_RS14510 460d36e0bd23b4d8f2ebf96f9310bd88 283 SUPERFAMILY SSF54211 2 162 1.59E-49 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold RG43_RS02715 0c2a1e9ea39fac494edaaf8671ff36ed 646 Gene3D G3DSA:3.30.70.270 227 391 2.3E-25 T 09-03-2017 RG43_RS02715 0c2a1e9ea39fac494edaaf8671ff36ed 646 SMART SM00267 213 385 7.9E-43 T 09-03-2017 IPR000160 GGDEF domain RG43_RS02715 0c2a1e9ea39fac494edaaf8671ff36ed 646 SUPERFAMILY SSF141868 403 642 4.45E-35 T 09-03-2017 IPR001633 EAL domain RG43_RS02715 0c2a1e9ea39fac494edaaf8671ff36ed 646 Gene3D G3DSA:3.20.20.450 398 638 3.2E-34 T 09-03-2017 IPR001633 EAL domain RG43_RS02715 0c2a1e9ea39fac494edaaf8671ff36ed 646 SUPERFAMILY SSF55073 230 387 2.28E-22 T 09-03-2017 IPR029787 Nucleotide cyclase RG43_RS02715 0c2a1e9ea39fac494edaaf8671ff36ed 646 Pfam PF00990 Diguanylate cyclase, GGDEF domain 224 380 2.1E-32 T 09-03-2017 IPR000160 GGDEF domain RG43_RS02715 0c2a1e9ea39fac494edaaf8671ff36ed 646 SMART SM00052 395 635 1.3E-60 T 09-03-2017 IPR001633 EAL domain RG43_RS02715 0c2a1e9ea39fac494edaaf8671ff36ed 646 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 222 381 4.5E-12 T 09-03-2017 IPR000160 GGDEF domain RG43_RS02715 0c2a1e9ea39fac494edaaf8671ff36ed 646 Pfam PF00563 EAL domain 403 628 1.3E-36 T 09-03-2017 IPR001633 EAL domain RG43_RS02715 0c2a1e9ea39fac494edaaf8671ff36ed 646 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 34 130 6.0E-33 T 09-03-2017 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 RG43_RS26970 4ff6f51d69cac43768b1b8e36e48d655 682 Gene3D G3DSA:2.170.130.10 42 156 4.7E-38 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RG43_RS26970 4ff6f51d69cac43768b1b8e36e48d655 682 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 153 2.6E-28 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RG43_RS26970 4ff6f51d69cac43768b1b8e36e48d655 682 Gene3D G3DSA:2.40.170.20 157 682 3.8E-94 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RG43_RS26970 4ff6f51d69cac43768b1b8e36e48d655 682 Pfam PF00593 TonB dependent receptor 418 680 3.8E-38 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RG43_RS26970 4ff6f51d69cac43768b1b8e36e48d655 682 SUPERFAMILY SSF56935 331 682 1.28E-117 T 09-03-2017 RG43_RS26970 4ff6f51d69cac43768b1b8e36e48d655 682 SUPERFAMILY SSF56935 31 271 1.28E-117 T 09-03-2017 RG43_RS26970 4ff6f51d69cac43768b1b8e36e48d655 682 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 38 - T 09-03-2017 IPR010916 TonB box, conserved site RG43_RS25995 4ff6f51d69cac43768b1b8e36e48d655 682 Gene3D G3DSA:2.170.130.10 42 156 4.7E-38 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RG43_RS25995 4ff6f51d69cac43768b1b8e36e48d655 682 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 153 2.6E-28 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RG43_RS25995 4ff6f51d69cac43768b1b8e36e48d655 682 Gene3D G3DSA:2.40.170.20 157 682 3.8E-94 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RG43_RS25995 4ff6f51d69cac43768b1b8e36e48d655 682 Pfam PF00593 TonB dependent receptor 418 680 3.8E-38 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RG43_RS25995 4ff6f51d69cac43768b1b8e36e48d655 682 SUPERFAMILY SSF56935 331 682 1.28E-117 T 09-03-2017 RG43_RS25995 4ff6f51d69cac43768b1b8e36e48d655 682 SUPERFAMILY SSF56935 31 271 1.28E-117 T 09-03-2017 RG43_RS25995 4ff6f51d69cac43768b1b8e36e48d655 682 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 38 - T 09-03-2017 IPR010916 TonB box, conserved site RG43_RS04580 4ff6f51d69cac43768b1b8e36e48d655 682 Gene3D G3DSA:2.170.130.10 42 156 4.7E-38 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RG43_RS04580 4ff6f51d69cac43768b1b8e36e48d655 682 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 153 2.6E-28 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RG43_RS04580 4ff6f51d69cac43768b1b8e36e48d655 682 Gene3D G3DSA:2.40.170.20 157 682 3.8E-94 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RG43_RS04580 4ff6f51d69cac43768b1b8e36e48d655 682 Pfam PF00593 TonB dependent receptor 418 680 3.8E-38 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RG43_RS04580 4ff6f51d69cac43768b1b8e36e48d655 682 SUPERFAMILY SSF56935 331 682 1.28E-117 T 09-03-2017 RG43_RS04580 4ff6f51d69cac43768b1b8e36e48d655 682 SUPERFAMILY SSF56935 31 271 1.28E-117 T 09-03-2017 RG43_RS04580 4ff6f51d69cac43768b1b8e36e48d655 682 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 38 - T 09-03-2017 IPR010916 TonB box, conserved site RG43_RS04625 9a9c79cd302442c40b630f6a71d217f6 82 Pfam PF04352 ProQ/FINO family 1 80 3.6E-14 T 09-03-2017 IPR016103 ProQ/FinO domain RG43_RS04625 9a9c79cd302442c40b630f6a71d217f6 82 Gene3D G3DSA:1.10.1710.10 1 81 1.4E-29 T 09-03-2017 IPR016103 ProQ/FinO domain RG43_RS04625 9a9c79cd302442c40b630f6a71d217f6 82 SUPERFAMILY SSF48657 1 75 4.45E-20 T 09-03-2017 IPR016103 ProQ/FinO domain RG43_RS17875 80286a6696431fe8b23fccb3c903f4e5 343 Gene3D G3DSA:1.10.8.60 143 222 6.3E-38 T 09-03-2017 RG43_RS17875 80286a6696431fe8b23fccb3c903f4e5 343 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 338 3.1E-72 T 09-03-2017 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS17875 80286a6696431fe8b23fccb3c903f4e5 343 Gene3D G3DSA:3.40.50.300 1 140 5.9E-55 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS17875 80286a6696431fe8b23fccb3c903f4e5 343 Gene3D G3DSA:1.20.272.20 223 341 1.3E-52 T 09-03-2017 RG43_RS17875 80286a6696431fe8b23fccb3c903f4e5 343 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 18 332 2.0E-107 T 09-03-2017 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 RG43_RS17875 80286a6696431fe8b23fccb3c903f4e5 343 Pfam PF06144 DNA polymerase III, delta subunit 21 190 3.9E-47 T 09-03-2017 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 RG43_RS17875 80286a6696431fe8b23fccb3c903f4e5 343 SUPERFAMILY SSF48019 212 335 1.11E-36 T 09-03-2017 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 RG43_RS17875 80286a6696431fe8b23fccb3c903f4e5 343 SUPERFAMILY SSF52540 1 210 1.94E-55 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS01870 8cebd25f26a93aa6c9902e81df0c2e32 256 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 4 254 47.206 T 09-03-2017 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 RG43_RS01870 8cebd25f26a93aa6c9902e81df0c2e32 256 SUPERFAMILY SSF53474 3 250 6.54E-47 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS01870 8cebd25f26a93aa6c9902e81df0c2e32 256 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 10 252 3.9E-120 T 09-03-2017 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 RG43_RS01870 8cebd25f26a93aa6c9902e81df0c2e32 256 Gene3D G3DSA:3.40.50.1820 3 251 6.9E-56 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS01870 8cebd25f26a93aa6c9902e81df0c2e32 256 Pfam PF00561 alpha/beta hydrolase fold 15 242 9.8E-32 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 RG43_RS18545 49fe59ee4daa85171c0f74f08b34e8b0 310 Pfam PF04960 Glutaminase 24 308 3.2E-106 T 09-03-2017 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 RG43_RS18545 49fe59ee4daa85171c0f74f08b34e8b0 310 TIGRFAM TIGR03814 Gln_ase: glutaminase A 8 308 1.1E-114 T 09-03-2017 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 RG43_RS18545 49fe59ee4daa85171c0f74f08b34e8b0 310 Hamap MF_00313 Glutaminase [glsA]. 3 308 44.014 T 09-03-2017 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 RG43_RS18545 49fe59ee4daa85171c0f74f08b34e8b0 310 Gene3D G3DSA:3.40.710.10 3 309 2.5E-119 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like RG43_RS18545 49fe59ee4daa85171c0f74f08b34e8b0 310 SUPERFAMILY SSF56601 3 309 6.34E-114 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like RG43_RS17670 cd37c86bc2968165e04b37190c24fbe5 181 Gene3D G3DSA:1.20.1380.10 68 181 5.3E-56 T 09-03-2017 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 RG43_RS17670 cd37c86bc2968165e04b37190c24fbe5 181 PIRSF PIRSF019401 1 181 1.3E-51 T 09-03-2017 IPR005621 Negative modulator of initiation of replicationr SeqA GO:0003677|GO:0032297 RG43_RS17670 cd37c86bc2968165e04b37190c24fbe5 181 Gene3D G3DSA:1.10.1220.10 1 40 5.6E-27 T 09-03-2017 IPR013321 Arc-type ribbon-helix-helix GO:0006355 RG43_RS17670 cd37c86bc2968165e04b37190c24fbe5 181 SUPERFAMILY SSF82808 65 181 1.83E-50 T 09-03-2017 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 RG43_RS17670 cd37c86bc2968165e04b37190c24fbe5 181 SUPERFAMILY SSF47598 1 35 4.45E-14 T 09-03-2017 IPR010985 Ribbon-helix-helix GO:0006355 RG43_RS17670 cd37c86bc2968165e04b37190c24fbe5 181 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 181 47.033 T 09-03-2017 IPR005621 Negative modulator of initiation of replicationr SeqA GO:0003677|GO:0032297 RG43_RS17670 cd37c86bc2968165e04b37190c24fbe5 181 Pfam PF03925 SeqA protein C-terminal domain 71 179 1.5E-50 T 09-03-2017 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 RG43_RS21240 4cb160688e448a418f6aa74d9d9f13ac 500 SUPERFAMILY SSF53743 1 326 5.23E-126 T 09-03-2017 IPR009015 L-fucose isomerase, N-terminal/central domain GO:0005737|GO:0005996|GO:0016861 RG43_RS21240 4cb160688e448a418f6aa74d9d9f13ac 500 ProDom PD018364 ISOMERASE L-ARABINOSE ARABINOSE METABOLISM CARBOHYDRATE CATABOLISM ARAA 1 303 0.0 T 09-03-2017 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4 RG43_RS21240 4cb160688e448a418f6aa74d9d9f13ac 500 Hamap MF_00519 L-arabinose isomerase [araA]. 1 477 64.997 T 09-03-2017 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4 RG43_RS21240 4cb160688e448a418f6aa74d9d9f13ac 500 Pfam PF02610 L-arabinose isomerase 5 359 7.9E-180 T 09-03-2017 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4 RG43_RS21240 4cb160688e448a418f6aa74d9d9f13ac 500 Pfam PF11762 L-arabinose isomerase C-terminal domain 363 476 8.4E-46 T 09-03-2017 IPR024664 L-arabinose isomerase, C-terminal KEGG: 00040+5.3.1.4 RG43_RS21240 4cb160688e448a418f6aa74d9d9f13ac 500 SUPERFAMILY SSF50443 329 497 2.51E-71 T 09-03-2017 IPR004216 L-fucose/L-arabinose isomerase, C-terminal RG43_RS21240 4cb160688e448a418f6aa74d9d9f13ac 500 PIRSF PIRSF001478 1 500 6.2E-260 T 09-03-2017 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4 RG43_RS24815 715f6a36cd2c3556526a6e82f0038c29 162 SMART SM00738 1 100 1.1E-33 T 09-03-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 RG43_RS24815 715f6a36cd2c3556526a6e82f0038c29 162 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 162 48.194 T 09-03-2017 IPR010215 Transcription antitermination protein RfaH GO:0006355 RG43_RS24815 715f6a36cd2c3556526a6e82f0038c29 162 Gene3D G3DSA:2.30.30.30 112 138 8.5E-4 T 09-03-2017 IPR014722 Ribosomal protein L2 domain 2 RG43_RS24815 715f6a36cd2c3556526a6e82f0038c29 162 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 159 3.6E-70 T 09-03-2017 IPR010215 Transcription antitermination protein RfaH GO:0006355 RG43_RS24815 715f6a36cd2c3556526a6e82f0038c29 162 Pfam PF02357 Transcription termination factor nusG 3 96 1.2E-19 T 09-03-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 RG43_RS24815 715f6a36cd2c3556526a6e82f0038c29 162 Gene3D G3DSA:3.30.70.940 2 96 4.5E-17 T 09-03-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 RG43_RS24815 715f6a36cd2c3556526a6e82f0038c29 162 SUPERFAMILY SSF82679 1 96 1.26E-27 T 09-03-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 RG43_RS18890 3243f45c3c27c4f8fc73903c074be942 299 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 215 227 - T 09-03-2017 IPR000092 Polyprenyl synthetase GO:0008299 RG43_RS18890 3243f45c3c27c4f8fc73903c074be942 299 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 97 - T 09-03-2017 IPR000092 Polyprenyl synthetase GO:0008299 RG43_RS18890 3243f45c3c27c4f8fc73903c074be942 299 Gene3D G3DSA:1.10.600.10 2 296 5.3E-91 T 09-03-2017 IPR008949 Isoprenoid synthase domain RG43_RS18890 3243f45c3c27c4f8fc73903c074be942 299 Pfam PF00348 Polyprenyl synthetase 34 271 1.8E-56 T 09-03-2017 IPR000092 Polyprenyl synthetase GO:0008299 RG43_RS18890 3243f45c3c27c4f8fc73903c074be942 299 SUPERFAMILY SSF48576 1 279 7.61E-88 T 09-03-2017 IPR008949 Isoprenoid synthase domain RG43_RS04710 9d78feb7627273ffc3473b14eac5158e 114 Gene3D G3DSA:2.60.40.1090 37 94 9.1E-19 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS04710 9d78feb7627273ffc3473b14eac5158e 114 Pfam PF00419 Fimbrial protein 39 92 1.7E-4 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS04710 9d78feb7627273ffc3473b14eac5158e 114 SUPERFAMILY SSF49401 38 96 6.83E-17 T 09-03-2017 IPR008966 Adhesion domain RG43_RS09985 9f22175e901d6c17897a03ee2bafc95b 189 Pfam PF11726 Protein of unknown function (DUF3296) 12 187 1.9E-54 T 09-03-2017 IPR021723 Inovirus Gp2 RG43_RS06580 5606903c45f4b0b5ca893c5864f9917a 482 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 09-03-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RG43_RS06580 5606903c45f4b0b5ca893c5864f9917a 482 SUPERFAMILY SSF53720 6 481 2.62E-178 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RG43_RS06580 5606903c45f4b0b5ca893c5864f9917a 482 Gene3D G3DSA:3.40.605.10 10 268 1.7E-107 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RG43_RS06580 5606903c45f4b0b5ca893c5864f9917a 482 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 30 476 2.7E-244 T 09-03-2017 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 RG43_RS06580 5606903c45f4b0b5ca893c5864f9917a 482 Pfam PF00171 Aldehyde dehydrogenase family 19 477 4.6E-177 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RG43_RS06580 5606903c45f4b0b5ca893c5864f9917a 482 Gene3D G3DSA:3.40.309.10 269 453 6.9E-71 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RG43_RS06580 5606903c45f4b0b5ca893c5864f9917a 482 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 09-03-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RG43_RS21235 3e7f75d8970968cffed68eae51fd901d 566 Gene3D G3DSA:3.30.420.40 3 282 4.7E-29 T 09-03-2017 RG43_RS21235 3e7f75d8970968cffed68eae51fd901d 566 Hamap MF_00520 Ribulokinase [araB]. 1 558 60.04 T 09-03-2017 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 RG43_RS21235 3e7f75d8970968cffed68eae51fd901d 566 SUPERFAMILY SSF53067 5 284 4.02E-22 T 09-03-2017 RG43_RS21235 3e7f75d8970968cffed68eae51fd901d 566 Gene3D G3DSA:3.30.420.40 285 545 8.7E-43 T 09-03-2017 RG43_RS21235 3e7f75d8970968cffed68eae51fd901d 566 SUPERFAMILY SSF53067 285 545 7.34E-42 T 09-03-2017 RG43_RS21235 3e7f75d8970968cffed68eae51fd901d 566 TIGRFAM TIGR01234 L-ribulokinase: ribulokinase 2 552 1.1E-281 T 09-03-2017 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 RG43_RS21235 3e7f75d8970968cffed68eae51fd901d 566 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 291 501 8.3E-37 T 09-03-2017 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 RG43_RS07325 4c7f0457fb24b05f357b7c0347237f04 248 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 21 247 1.3E-84 T 09-03-2017 IPR017788 DnaA regulatory inactivator Hda GO:0032297 RG43_RS07325 4c7f0457fb24b05f357b7c0347237f04 248 Gene3D G3DSA:3.40.50.300 16 179 1.5E-43 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS07325 4c7f0457fb24b05f357b7c0347237f04 248 Gene3D G3DSA:1.10.8.60 182 247 6.6E-31 T 09-03-2017 RG43_RS07325 4c7f0457fb24b05f357b7c0347237f04 248 SUPERFAMILY SSF52540 33 226 8.05E-23 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS07325 4c7f0457fb24b05f357b7c0347237f04 248 Hamap MF_01158 DnaA regulatory inactivator Hda [hda]. 20 248 57.557 T 09-03-2017 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae RG43_RS07325 4c7f0457fb24b05f357b7c0347237f04 248 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 146 173 1.8E-7 T 09-03-2017 IPR020591 Chromosomal replication control, initiator DnaA-like RG43_RS07325 4c7f0457fb24b05f357b7c0347237f04 248 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 58 78 1.8E-7 T 09-03-2017 IPR020591 Chromosomal replication control, initiator DnaA-like RG43_RS07325 4c7f0457fb24b05f357b7c0347237f04 248 Pfam PF00308 Bacterial dnaA protein 31 227 1.6E-16 T 09-03-2017 IPR013317 Chromosomal replication initiator protein DnaA RG43_RS18995 c0f1e6b7a8b204b8fb75b3f4980a4a86 431 SMART SM00091 98 165 1.3E-5 T 09-03-2017 IPR000014 PAS domain RG43_RS18995 c0f1e6b7a8b204b8fb75b3f4980a4a86 431 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 95 421 1.9E-139 T 09-03-2017 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 RG43_RS18995 c0f1e6b7a8b204b8fb75b3f4980a4a86 431 Pfam PF11808 Domain of unknown function (DUF3329) 6 91 3.2E-28 T 09-03-2017 IPR021766 Protein of unknown function DUF3329 GO:0004673 RG43_RS18995 c0f1e6b7a8b204b8fb75b3f4980a4a86 431 SMART SM00388 203 269 7.3E-23 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS18995 c0f1e6b7a8b204b8fb75b3f4980a4a86 431 Pfam PF00989 PAS fold 99 194 1.1E-10 T 09-03-2017 IPR013767 PAS fold GO:0006355 RG43_RS18995 c0f1e6b7a8b204b8fb75b3f4980a4a86 431 Gene3D G3DSA:3.30.565.10 255 422 1.4E-45 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS18995 c0f1e6b7a8b204b8fb75b3f4980a4a86 431 SMART SM00387 313 425 9.5E-40 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS18995 c0f1e6b7a8b204b8fb75b3f4980a4a86 431 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 313 424 3.7E-25 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS18995 c0f1e6b7a8b204b8fb75b3f4980a4a86 431 SUPERFAMILY SSF47384 190 268 1.77E-19 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS18995 c0f1e6b7a8b204b8fb75b3f4980a4a86 431 SUPERFAMILY SSF55874 259 423 4.32E-44 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS18995 c0f1e6b7a8b204b8fb75b3f4980a4a86 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 1.8E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS18995 c0f1e6b7a8b204b8fb75b3f4980a4a86 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 1.8E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS18995 c0f1e6b7a8b204b8fb75b3f4980a4a86 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 1.8E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS18995 c0f1e6b7a8b204b8fb75b3f4980a4a86 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 1.8E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS18995 c0f1e6b7a8b204b8fb75b3f4980a4a86 431 Gene3D G3DSA:3.30.450.20 99 194 6.2E-10 T 09-03-2017 RG43_RS18995 c0f1e6b7a8b204b8fb75b3f4980a4a86 431 Pfam PF00512 His Kinase A (phospho-acceptor) domain 203 268 2.1E-18 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS18995 c0f1e6b7a8b204b8fb75b3f4980a4a86 431 SUPERFAMILY SSF55785 87 195 1.54E-10 T 09-03-2017 IPR000014 PAS domain RG43_RS18995 c0f1e6b7a8b204b8fb75b3f4980a4a86 431 Gene3D G3DSA:1.10.287.130 195 254 1.8E-22 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS02860 8c6264609850a1927d3dae67989bc9cb 297 Gene3D G3DSA:3.20.20.70 4 292 1.8E-87 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS02860 8c6264609850a1927d3dae67989bc9cb 297 Hamap MF_01237 N-acetylneuraminate lyase [nanA]. 5 294 52.009 T 09-03-2017 IPR005264 N-acetylneuraminate lyase GO:0005737|GO:0005975|GO:0008747 KEGG: 00520+4.1.3.3|MetaCyc: PWY-7581 RG43_RS02860 8c6264609850a1927d3dae67989bc9cb 297 PIRSF PIRSF001365 1 297 5.3E-85 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 RG43_RS02860 8c6264609850a1927d3dae67989bc9cb 297 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 41 58 - T 09-03-2017 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RG43_RS02860 8c6264609850a1927d3dae67989bc9cb 297 TIGRFAM TIGR00683 nanA: N-acetylneuraminate lyase 5 297 8.6E-173 T 09-03-2017 IPR005264 N-acetylneuraminate lyase GO:0005737|GO:0005975|GO:0008747 KEGG: 00520+4.1.3.3|MetaCyc: PWY-7581 RG43_RS02860 8c6264609850a1927d3dae67989bc9cb 297 SMART SM01130 4 293 7.5E-88 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 RG43_RS02860 8c6264609850a1927d3dae67989bc9cb 297 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 137 167 - T 09-03-2017 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RG43_RS02860 8c6264609850a1927d3dae67989bc9cb 297 SUPERFAMILY SSF51569 5 291 6.7E-82 T 09-03-2017 RG43_RS02860 8c6264609850a1927d3dae67989bc9cb 297 Pfam PF00701 Dihydrodipicolinate synthetase family 5 291 3.6E-113 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 RG43_RS02860 8c6264609850a1927d3dae67989bc9cb 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 106 122 1.4E-21 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 RG43_RS02860 8c6264609850a1927d3dae67989bc9cb 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 132 149 1.4E-21 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 RG43_RS02860 8c6264609850a1927d3dae67989bc9cb 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 1.4E-21 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 RG43_RS02860 8c6264609850a1927d3dae67989bc9cb 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 1.4E-21 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 RG43_RS05975 09399a988ad91334942845524f1fc320 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 28 258 3.8E-55 T 09-03-2017 RG43_RS05975 09399a988ad91334942845524f1fc320 261 Gene3D G3DSA:3.40.50.720 14 259 2.3E-78 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS05975 09399a988ad91334942845524f1fc320 261 SUPERFAMILY SSF51735 17 260 2.99E-75 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS05975 09399a988ad91334942845524f1fc320 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 93 104 4.0E-13 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS05975 09399a988ad91334942845524f1fc320 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 154 4.0E-13 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS05975 09399a988ad91334942845524f1fc320 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 4.0E-13 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS05975 09399a988ad91334942845524f1fc320 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RG43_RS05975 09399a988ad91334942845524f1fc320 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 3.3E-39 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS05975 09399a988ad91334942845524f1fc320 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 3.3E-39 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS05975 09399a988ad91334942845524f1fc320 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 3.3E-39 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS05975 09399a988ad91334942845524f1fc320 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 3.3E-39 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS05975 09399a988ad91334942845524f1fc320 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 20 37 3.3E-39 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS05975 09399a988ad91334942845524f1fc320 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 93 104 3.3E-39 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS05655 22155f963af8480f41f0d41969207f89 458 Pfam PF06812 ImpA, N-terminal, type VI secretion system 25 112 1.3E-11 T 09-03-2017 IPR010657 ImpA, N-terminal RG43_RS05655 22155f963af8480f41f0d41969207f89 458 Pfam PF12486 Type VI secretion system, EvfB, or VasL 306 448 2.2E-42 T 09-03-2017 IPR021069 ImpA, C-terminal RG43_RS09320 5c58e894c5cf1e4f9e3dad8bcc06b840 266 Gene3D G3DSA:3.40.1190.20 6 263 4.0E-101 T 09-03-2017 IPR029056 Ribokinase-like RG43_RS09320 5c58e894c5cf1e4f9e3dad8bcc06b840 266 SUPERFAMILY SSF53613 5 265 1.87E-81 T 09-03-2017 IPR029056 Ribokinase-like RG43_RS09320 5c58e894c5cf1e4f9e3dad8bcc06b840 266 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 6 262 2.7E-109 T 09-03-2017 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RG43_RS09320 5c58e894c5cf1e4f9e3dad8bcc06b840 266 Pfam PF08543 Phosphomethylpyrimidine kinase 13 260 3.0E-95 T 09-03-2017 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-964975 RG43_RS19470 30077990509e72c2f31abaf228b93992 490 Pfam PF00171 Aldehyde dehydrogenase family 17 479 3.5E-177 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RG43_RS19470 30077990509e72c2f31abaf228b93992 490 Gene3D G3DSA:3.40.605.10 6 265 1.2E-102 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RG43_RS19470 30077990509e72c2f31abaf228b93992 490 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 09-03-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RG43_RS19470 30077990509e72c2f31abaf228b93992 490 SUPERFAMILY SSF53720 4 482 1.96E-169 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RG43_RS19470 30077990509e72c2f31abaf228b93992 490 Gene3D G3DSA:3.40.309.10 266 444 3.7E-68 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RG43_RS19470 30077990509e72c2f31abaf228b93992 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 09-03-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RG43_RS19470 30077990509e72c2f31abaf228b93992 490 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 10 477 1.5E-245 T 09-03-2017 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 RG43_RS19470 30077990509e72c2f31abaf228b93992 490 Hamap MF_00804 NAD/NADP-dependent betaine aldehyde dehydrogenase [betB]. 4 490 57.641 T 09-03-2017 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 RG43_RS13385 581340e889df99e0c19b9c720235509c 337 SUPERFAMILY SSF50331 237 328 2.0E-9 T 09-03-2017 IPR008995 Molybdate/tungstate binding, C-terminal RG43_RS13385 581340e889df99e0c19b9c720235509c 337 SUPERFAMILY SSF52540 5 242 5.58E-83 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS13385 581340e889df99e0c19b9c720235509c 337 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS13385 581340e889df99e0c19b9c720235509c 337 Pfam PF08402 TOBE domain 257 331 5.9E-16 T 09-03-2017 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 RG43_RS13385 581340e889df99e0c19b9c720235509c 337 Pfam PF00005 ABC transporter 21 162 5.0E-32 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS13385 581340e889df99e0c19b9c720235509c 337 Gene3D G3DSA:3.40.50.300 3 237 5.8E-76 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS13385 581340e889df99e0c19b9c720235509c 337 SMART SM00382 29 212 1.9E-17 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS22665 fe3e07d970ca830a34d91a3fa7e4f9e2 102 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 2.0E-29 T 09-03-2017 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 RG43_RS22665 fe3e07d970ca830a34d91a3fa7e4f9e2 102 Gene3D G3DSA:2.30.30.100 1 74 4.5E-38 T 09-03-2017 RG43_RS22665 fe3e07d970ca830a34d91a3fa7e4f9e2 102 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.396 T 09-03-2017 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 RG43_RS22665 fe3e07d970ca830a34d91a3fa7e4f9e2 102 SUPERFAMILY SSF50182 7 69 4.04E-24 T 09-03-2017 IPR010920 LSM domain RG43_RS06315 cc70f09fe5af29105781fd3a8a15181b 175 Pfam PF12798 4Fe-4S binding domain 131 151 0.05 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS06315 cc70f09fe5af29105781fd3a8a15181b 175 Gene3D G3DSA:3.30.70.20 70 95 6.5E-20 T 09-03-2017 RG43_RS06315 cc70f09fe5af29105781fd3a8a15181b 175 Pfam PF12800 4Fe-4S binding domain 10 22 0.4 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS06315 cc70f09fe5af29105781fd3a8a15181b 175 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS06315 cc70f09fe5af29105781fd3a8a15181b 175 Pfam PF13247 4Fe-4S dicluster domain 55 104 3.3E-8 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS06315 cc70f09fe5af29105781fd3a8a15181b 175 Gene3D G3DSA:3.30.70.20 96 167 2.9E-15 T 09-03-2017 RG43_RS06315 cc70f09fe5af29105781fd3a8a15181b 175 Gene3D G3DSA:3.30.70.20 6 69 2.5E-9 T 09-03-2017 RG43_RS06315 cc70f09fe5af29105781fd3a8a15181b 175 SUPERFAMILY SSF54862 1 170 4.13E-42 T 09-03-2017 RG43_RS18675 b135585b341397024703bc0195d3f308 397 Gene3D G3DSA:2.40.50.100 173 208 1.3E-25 T 09-03-2017 RG43_RS18675 b135585b341397024703bc0195d3f308 397 Gene3D G3DSA:2.40.50.100 65 98 1.3E-25 T 09-03-2017 RG43_RS18675 b135585b341397024703bc0195d3f308 397 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 62 293 1.8E-13 T 09-03-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RG43_RS18675 b135585b341397024703bc0195d3f308 397 Pfam PF00529 HlyD membrane-fusion protein of T1SS 38 360 4.8E-14 T 09-03-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RG43_RS18675 b135585b341397024703bc0195d3f308 397 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 375 1.1E-86 T 09-03-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RG43_RS18675 b135585b341397024703bc0195d3f308 397 SUPERFAMILY SSF111369 52 300 1.11E-89 T 09-03-2017 RG43_RS02385 015d00c9b7f7f2897a9ebd700c9a9d69 233 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.15 T 09-03-2017 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 RG43_RS02385 015d00c9b7f7f2897a9ebd700c9a9d69 233 SUPERFAMILY SSF54814 2 106 1.6E-37 T 09-03-2017 IPR009019 K homology domain, prokaryotic type GO:0003723 RG43_RS02385 015d00c9b7f7f2897a9ebd700c9a9d69 233 Gene3D G3DSA:3.30.300.20 18 107 1.1E-33 T 09-03-2017 IPR015946 K homology domain-like, alpha/beta RG43_RS02385 015d00c9b7f7f2897a9ebd700c9a9d69 233 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 2.6E-100 T 09-03-2017 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 RG43_RS02385 015d00c9b7f7f2897a9ebd700c9a9d69 233 Gene3D G3DSA:3.30.1140.32 108 207 5.9E-48 T 09-03-2017 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02385 015d00c9b7f7f2897a9ebd700c9a9d69 233 SMART SM00322 60 125 1.6E-6 T 09-03-2017 IPR004087 K Homology domain GO:0003676 RG43_RS02385 015d00c9b7f7f2897a9ebd700c9a9d69 233 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 09-03-2017 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02385 015d00c9b7f7f2897a9ebd700c9a9d69 233 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 1.8E-41 T 09-03-2017 RG43_RS02385 015d00c9b7f7f2897a9ebd700c9a9d69 233 SUPERFAMILY SSF54821 108 206 6.93E-41 T 09-03-2017 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02385 015d00c9b7f7f2897a9ebd700c9a9d69 233 Pfam PF07650 KH domain 38 111 9.5E-19 T 09-03-2017 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS12515 9a365c20928856381eb798b792ecf2ad 192 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 191 1.7E-88 T 09-03-2017 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 RG43_RS12515 9a365c20928856381eb798b792ecf2ad 192 Pfam PF14697 4Fe-4S dicluster domain 110 163 1.3E-16 T 09-03-2017 RG43_RS12515 9a365c20928856381eb798b792ecf2ad 192 SUPERFAMILY SSF54862 38 174 6.35E-29 T 09-03-2017 RG43_RS12515 9a365c20928856381eb798b792ecf2ad 192 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS12515 9a365c20928856381eb798b792ecf2ad 192 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 117 128 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS12515 9a365c20928856381eb798b792ecf2ad 192 Pfam PF04060 Putative Fe-S cluster 44 76 1.4E-12 T 09-03-2017 IPR007202 4Fe-4S domain GO:0051536 RG43_RS12515 9a365c20928856381eb798b792ecf2ad 192 Gene3D G3DSA:3.30.70.20 111 177 7.2E-17 T 09-03-2017 RG43_RS12515 9a365c20928856381eb798b792ecf2ad 192 Hamap MF_00463 Electron transport complex subunit RsxB [rsxB]. 4 185 43.313 T 09-03-2017 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 RG43_RS12515 9a365c20928856381eb798b792ecf2ad 192 PIRSF PIRSF005784 3 191 1.8E-84 T 09-03-2017 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 RG43_RS19475 0c195886658842bb72ae154b8d1738c9 562 Gene3D G3DSA:3.50.50.60 470 534 7.2E-120 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS19475 0c195886658842bb72ae154b8d1738c9 562 Gene3D G3DSA:3.50.50.60 2 127 7.2E-120 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS19475 0c195886658842bb72ae154b8d1738c9 562 Gene3D G3DSA:3.50.50.60 190 318 7.2E-120 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS19475 0c195886658842bb72ae154b8d1738c9 562 Pfam PF00732 GMC oxidoreductase 3 300 3.0E-106 T 09-03-2017 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 RG43_RS19475 0c195886658842bb72ae154b8d1738c9 562 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 259 273 - T 09-03-2017 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 RG43_RS19475 0c195886658842bb72ae154b8d1738c9 562 SUPERFAMILY SSF51905 2 293 2.16E-86 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS19475 0c195886658842bb72ae154b8d1738c9 562 SUPERFAMILY SSF51905 476 535 2.16E-86 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS19475 0c195886658842bb72ae154b8d1738c9 562 TIGRFAM TIGR01810 betA: choline dehydrogenase 4 537 0.0 T 09-03-2017 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 RG43_RS19475 0c195886658842bb72ae154b8d1738c9 562 Pfam PF05199 GMC oxidoreductase 393 527 1.7E-41 T 09-03-2017 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 RG43_RS19475 0c195886658842bb72ae154b8d1738c9 562 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 1 554 60.21 T 09-03-2017 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 RG43_RS19475 0c195886658842bb72ae154b8d1738c9 562 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 82 105 - T 09-03-2017 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 RG43_RS19475 0c195886658842bb72ae154b8d1738c9 562 PIRSF PIRSF000137 1 540 8.7E-140 T 09-03-2017 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 RG43_RS19475 0c195886658842bb72ae154b8d1738c9 562 SUPERFAMILY SSF54373 295 477 2.65E-67 T 09-03-2017 RG43_RS00870 f5ef854849275147dff9964a9a0b435e 282 Pfam PF01614 Bacterial transcriptional regulator 143 268 5.3E-45 T 09-03-2017 IPR014757 Transcription regulator IclR, C-terminal RG43_RS00870 f5ef854849275147dff9964a9a0b435e 282 Gene3D G3DSA:1.10.10.10 15 91 4.4E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS00870 f5ef854849275147dff9964a9a0b435e 282 SMART SM00346 23 113 6.4E-41 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RG43_RS00870 f5ef854849275147dff9964a9a0b435e 282 Gene3D G3DSA:3.30.450.40 92 273 8.6E-57 T 09-03-2017 IPR029016 GAF domain-like RG43_RS00870 f5ef854849275147dff9964a9a0b435e 282 SUPERFAMILY SSF46785 24 97 1.3E-13 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS00870 f5ef854849275147dff9964a9a0b435e 282 SUPERFAMILY SSF55781 90 272 5.43E-46 T 09-03-2017 IPR029016 GAF domain-like RG43_RS00870 f5ef854849275147dff9964a9a0b435e 282 Pfam PF09339 IclR helix-turn-helix domain 25 74 4.2E-14 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RG43_RS00320 b9779ac132bcdb5ae5da6d5d637311fb 654 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 147 5.6E-21 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RG43_RS00320 b9779ac132bcdb5ae5da6d5d637311fb 654 Pfam PF00593 TonB dependent receptor 407 653 2.0E-20 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RG43_RS00320 b9779ac132bcdb5ae5da6d5d637311fb 654 Gene3D G3DSA:2.170.130.10 42 152 3.4E-33 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RG43_RS00320 b9779ac132bcdb5ae5da6d5d637311fb 654 Gene3D G3DSA:2.40.170.20 153 653 7.3E-62 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RG43_RS00320 b9779ac132bcdb5ae5da6d5d637311fb 654 SUPERFAMILY SSF56935 30 654 3.66E-87 T 09-03-2017 RG43_RS00320 b9779ac132bcdb5ae5da6d5d637311fb 654 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 30 654 3.0E-124 T 09-03-2017 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 RG43_RS12230 130dc4b0402a6112fcb71a3f29e4dea3 248 SUPERFAMILY SSF52540 2 231 5.71E-44 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS12230 130dc4b0402a6112fcb71a3f29e4dea3 248 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS12230 130dc4b0402a6112fcb71a3f29e4dea3 248 Pfam PF00005 ABC transporter 17 172 2.1E-20 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS12230 130dc4b0402a6112fcb71a3f29e4dea3 248 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 244 3.8E-115 T 09-03-2017 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 RG43_RS12230 130dc4b0402a6112fcb71a3f29e4dea3 248 Gene3D G3DSA:3.40.50.300 1 236 3.0E-47 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS12230 130dc4b0402a6112fcb71a3f29e4dea3 248 SMART SM00382 26 223 7.5E-9 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS25745 13f77a6303c19c205fc646931db632dd 288 Gene3D G3DSA:1.10.10.60 238 283 5.2E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS25745 13f77a6303c19c205fc646931db632dd 288 SUPERFAMILY SSF46689 184 234 1.84E-7 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS25745 13f77a6303c19c205fc646931db632dd 288 Gene3D G3DSA:2.60.120.280 155 193 6.4E-7 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RG43_RS25745 13f77a6303c19c205fc646931db632dd 288 Gene3D G3DSA:2.60.120.280 56 121 6.4E-7 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RG43_RS25745 13f77a6303c19c205fc646931db632dd 288 Pfam PF02311 AraC-like ligand binding domain 65 130 2.2E-6 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RG43_RS25745 13f77a6303c19c205fc646931db632dd 288 Pfam PF12833 Helix-turn-helix domain 207 284 4.9E-17 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS25745 13f77a6303c19c205fc646931db632dd 288 SUPERFAMILY SSF51215 14 165 3.27E-11 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RG43_RS25745 13f77a6303c19c205fc646931db632dd 288 SMART SM00342 200 283 1.1E-25 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS25745 13f77a6303c19c205fc646931db632dd 288 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 237 279 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RG43_RS25745 13f77a6303c19c205fc646931db632dd 288 Gene3D G3DSA:1.10.10.60 194 237 3.2E-11 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS25745 13f77a6303c19c205fc646931db632dd 288 SUPERFAMILY SSF46689 237 285 6.72E-8 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS03895 588547ef3c4d62c7c322e82d0e2fdbbf 206 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 27 204 2.9E-53 T 09-03-2017 IPR016476 SH3 domain protein RG43_RS03895 588547ef3c4d62c7c322e82d0e2fdbbf 206 Pfam PF08239 Bacterial SH3 domain 35 85 3.6E-9 T 09-03-2017 IPR003646 SH3-like domain, bacterial-type RG43_RS03895 588547ef3c4d62c7c322e82d0e2fdbbf 206 PIRSF PIRSF006158 1 205 3.8E-73 T 09-03-2017 IPR016476 SH3 domain protein RG43_RS03895 588547ef3c4d62c7c322e82d0e2fdbbf 206 SMART SM00287 23 89 8.2E-16 T 09-03-2017 IPR003646 SH3-like domain, bacterial-type RG43_RS26270 588547ef3c4d62c7c322e82d0e2fdbbf 206 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 27 204 2.9E-53 T 09-03-2017 IPR016476 SH3 domain protein RG43_RS26270 588547ef3c4d62c7c322e82d0e2fdbbf 206 Pfam PF08239 Bacterial SH3 domain 35 85 3.6E-9 T 09-03-2017 IPR003646 SH3-like domain, bacterial-type RG43_RS26270 588547ef3c4d62c7c322e82d0e2fdbbf 206 PIRSF PIRSF006158 1 205 3.8E-73 T 09-03-2017 IPR016476 SH3 domain protein RG43_RS26270 588547ef3c4d62c7c322e82d0e2fdbbf 206 SMART SM00287 23 89 8.2E-16 T 09-03-2017 IPR003646 SH3-like domain, bacterial-type RG43_RS00440 18fe2359e4d9b63fe46a5f355c76c298 286 PIRSF PIRSF001359 1 283 1.9E-89 T 09-03-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RG43_RS00440 18fe2359e4d9b63fe46a5f355c76c298 286 Gene3D G3DSA:3.20.20.70 1 284 1.5E-99 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS00440 18fe2359e4d9b63fe46a5f355c76c298 286 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 283 9.9E-78 T 09-03-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RG43_RS00440 18fe2359e4d9b63fe46a5f355c76c298 286 Pfam PF01116 Fructose-bisphosphate aldolase class-II 3 282 1.1E-88 T 09-03-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RG43_RS00440 18fe2359e4d9b63fe46a5f355c76c298 286 SUPERFAMILY SSF51569 3 283 2.93E-90 T 09-03-2017 RG43_RS21900 163c7f4632025ad7a6410f1e82cc7bd8 465 SUPERFAMILY SSF116734 245 455 1.57E-37 T 09-03-2017 RG43_RS21900 163c7f4632025ad7a6410f1e82cc7bd8 465 Pfam PF01420 Type I restriction modification DNA specificity domain 259 401 8.2E-19 T 09-03-2017 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 RG43_RS21900 163c7f4632025ad7a6410f1e82cc7bd8 465 Pfam PF01420 Type I restriction modification DNA specificity domain 20 188 9.1E-11 T 09-03-2017 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 RG43_RS21900 163c7f4632025ad7a6410f1e82cc7bd8 465 SUPERFAMILY SSF116734 19 202 2.29E-34 T 09-03-2017 RG43_RS00145 30ce29bc5eaf873489742ef687d7b653 216 SUPERFAMILY SSF46689 94 147 1.79E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS00145 30ce29bc5eaf873489742ef687d7b653 216 Pfam PF01527 Transposase 93 150 2.0E-15 T 09-03-2017 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RG43_RS00145 30ce29bc5eaf873489742ef687d7b653 216 Gene3D G3DSA:1.10.10.60 98 143 9.3E-7 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS12685 5cc99fc665f6d87fc9a75e33e4991d22 273 SUPERFAMILY SSF50494 113 270 1.27E-32 T 09-03-2017 IPR009003 Peptidase S1, PA clan RG43_RS12685 5cc99fc665f6d87fc9a75e33e4991d22 273 SUPERFAMILY SSF50494 32 85 1.27E-32 T 09-03-2017 IPR009003 Peptidase S1, PA clan RG43_RS12685 5cc99fc665f6d87fc9a75e33e4991d22 273 Gene3D G3DSA:2.40.10.10 177 246 6.3E-9 T 09-03-2017 RG43_RS12685 5cc99fc665f6d87fc9a75e33e4991d22 273 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 217 228 - T 09-03-2017 IPR033116 Serine proteases, trypsin family, serine active site RG43_RS12685 5cc99fc665f6d87fc9a75e33e4991d22 273 Pfam PF00089 Trypsin 50 244 3.0E-11 T 09-03-2017 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 RG43_RS12685 5cc99fc665f6d87fc9a75e33e4991d22 273 Gene3D G3DSA:2.40.10.10 54 166 3.9E-12 T 09-03-2017 RG43_RS12685 5cc99fc665f6d87fc9a75e33e4991d22 273 PRINTS PR00839 V8 serine protease family signature 212 228 5.2E-23 T 09-03-2017 IPR008256 Peptidase S1B GO:0006508|GO:0008236 RG43_RS12685 5cc99fc665f6d87fc9a75e33e4991d22 273 PRINTS PR00839 V8 serine protease family signature 69 86 5.2E-23 T 09-03-2017 IPR008256 Peptidase S1B GO:0006508|GO:0008236 RG43_RS12685 5cc99fc665f6d87fc9a75e33e4991d22 273 PRINTS PR00839 V8 serine protease family signature 178 191 5.2E-23 T 09-03-2017 IPR008256 Peptidase S1B GO:0006508|GO:0008236 RG43_RS12685 5cc99fc665f6d87fc9a75e33e4991d22 273 PRINTS PR00839 V8 serine protease family signature 232 244 5.2E-23 T 09-03-2017 IPR008256 Peptidase S1B GO:0006508|GO:0008236 RG43_RS12685 5cc99fc665f6d87fc9a75e33e4991d22 273 PRINTS PR00839 V8 serine protease family signature 44 61 5.2E-23 T 09-03-2017 IPR008256 Peptidase S1B GO:0006508|GO:0008236 RG43_RS12685 5cc99fc665f6d87fc9a75e33e4991d22 273 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 80 85 - T 09-03-2017 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 RG43_RS09490 2d8e237592034561d032adbd8cfbc87b 282 SUPERFAMILY SSF55945 2 97 1.57E-29 T 09-03-2017 RG43_RS09490 2d8e237592034561d032adbd8cfbc87b 282 SMART SM01009 1 112 2.3E-50 T 09-03-2017 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal RG43_RS09490 2d8e237592034561d032adbd8cfbc87b 282 SUPERFAMILY SSF48150 102 274 1.15E-48 T 09-03-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 RG43_RS09490 2d8e237592034561d032adbd8cfbc87b 282 Gene3D G3DSA:1.10.1670.10 231 281 1.3E-20 T 09-03-2017 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 RG43_RS09490 2d8e237592034561d032adbd8cfbc87b 282 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 118 239 1.9E-9 T 09-03-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 RG43_RS09490 2d8e237592034561d032adbd8cfbc87b 282 Pfam PF06029 AlkA N-terminal domain 3 112 1.8E-29 T 09-03-2017 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal RG43_RS09490 2d8e237592034561d032adbd8cfbc87b 282 Gene3D G3DSA:3.30.310.20 2 112 4.8E-37 T 09-03-2017 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal RG43_RS09490 2d8e237592034561d032adbd8cfbc87b 282 Gene3D G3DSA:1.10.340.30 113 229 1.1E-37 T 09-03-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 RG43_RS09490 2d8e237592034561d032adbd8cfbc87b 282 SMART SM00478 130 276 3.5E-33 T 09-03-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 RG43_RS09490 2d8e237592034561d032adbd8cfbc87b 282 ProSitePatterns PS00516 Alkylbase DNA glycosidases alkA family signature. 214 238 - T 09-03-2017 IPR000035 Alkylbase DNA glycosidase, conserved site GO:0003905|GO:0006281 RG43_RS07540 75ddc9a0da2345f1dbea98d2c8ab1b29 166 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 21 40 - T 09-03-2017 IPR020808 Bacterial microcompartments protein, conserved site RG43_RS07540 75ddc9a0da2345f1dbea98d2c8ab1b29 166 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 4 47 5.0E-9 T 09-03-2017 RG43_RS07540 75ddc9a0da2345f1dbea98d2c8ab1b29 166 SMART SM00877 3 79 1.4E-26 T 09-03-2017 IPR000249 Microcompartment protein, bacteria RG43_RS07540 75ddc9a0da2345f1dbea98d2c8ab1b29 166 Gene3D G3DSA:1.10.10.10 108 165 2.5E-7 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS07540 75ddc9a0da2345f1dbea98d2c8ab1b29 166 Pfam PF16365 Ethanolamine utilization protein EutK C-terminus 109 162 3.8E-35 T 09-03-2017 IPR032298 Ethanolamine utilization protein EutK, C-terminal RG43_RS07540 75ddc9a0da2345f1dbea98d2c8ab1b29 166 Pfam PF00936 BMC domain 4 79 2.0E-21 T 09-03-2017 IPR000249 Microcompartment protein, bacteria RG43_RS07540 75ddc9a0da2345f1dbea98d2c8ab1b29 166 SUPERFAMILY SSF143414 3 92 1.01E-23 T 09-03-2017 RG43_RS01025 202f22ebe26485fa775c76dca5914f96 133 Pfam PF13518 Helix-turn-helix domain 16 54 2.2E-6 T 09-03-2017 RG43_RS01025 202f22ebe26485fa775c76dca5914f96 133 Gene3D G3DSA:1.10.10.60 15 104 4.6E-8 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS01025 202f22ebe26485fa775c76dca5914f96 133 SUPERFAMILY SSF48295 6 53 1.94E-12 T 09-03-2017 IPR010921 Trp repressor/replication initiator GO:0043565 RG43_RS15430 202f22ebe26485fa775c76dca5914f96 133 Pfam PF13518 Helix-turn-helix domain 16 54 2.2E-6 T 09-03-2017 RG43_RS15430 202f22ebe26485fa775c76dca5914f96 133 Gene3D G3DSA:1.10.10.60 15 104 4.6E-8 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS15430 202f22ebe26485fa775c76dca5914f96 133 SUPERFAMILY SSF48295 6 53 1.94E-12 T 09-03-2017 IPR010921 Trp repressor/replication initiator GO:0043565 RG43_RS01885 202f22ebe26485fa775c76dca5914f96 133 Pfam PF13518 Helix-turn-helix domain 16 54 2.2E-6 T 09-03-2017 RG43_RS01885 202f22ebe26485fa775c76dca5914f96 133 Gene3D G3DSA:1.10.10.60 15 104 4.6E-8 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS01885 202f22ebe26485fa775c76dca5914f96 133 SUPERFAMILY SSF48295 6 53 1.94E-12 T 09-03-2017 IPR010921 Trp repressor/replication initiator GO:0043565 RG43_RS23325 d1d504a5f674b4e0ff7f7a179911c00b 528 SMART SM00052 267 511 1.6E-120 T 09-03-2017 IPR001633 EAL domain RG43_RS23325 d1d504a5f674b4e0ff7f7a179911c00b 528 Pfam PF12792 CSS motif domain associated with EAL 40 243 4.2E-40 T 09-03-2017 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain RG43_RS23325 d1d504a5f674b4e0ff7f7a179911c00b 528 Pfam PF00563 EAL domain 273 505 3.9E-69 T 09-03-2017 IPR001633 EAL domain RG43_RS23325 d1d504a5f674b4e0ff7f7a179911c00b 528 SUPERFAMILY SSF141868 274 520 2.75E-78 T 09-03-2017 IPR001633 EAL domain RG43_RS23325 d1d504a5f674b4e0ff7f7a179911c00b 528 Gene3D G3DSA:3.20.20.450 273 518 5.3E-85 T 09-03-2017 IPR001633 EAL domain RG43_RS10865 957b3181422a84deb1c4730290046581 250 SUPERFAMILY SSF52540 4 243 1.52E-78 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS10865 957b3181422a84deb1c4730290046581 250 SMART SM00382 28 221 3.2E-20 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS10865 957b3181422a84deb1c4730290046581 250 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS10865 957b3181422a84deb1c4730290046581 250 PIRSF PIRSF039085 1 249 4.2E-112 T 09-03-2017 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 RG43_RS10865 957b3181422a84deb1c4730290046581 250 Pfam PF00005 ABC transporter 19 173 3.4E-36 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS10865 957b3181422a84deb1c4730290046581 250 Gene3D G3DSA:3.40.50.300 3 245 1.9E-87 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS06680 1be09d1927c9182209e97c0ccdc5fc51 160 Pfam PF00691 OmpA family 55 151 2.0E-18 T 09-03-2017 IPR006665 OmpA-like domain RG43_RS06680 1be09d1927c9182209e97c0ccdc5fc51 160 SUPERFAMILY SSF103088 45 157 4.58E-28 T 09-03-2017 IPR006665 OmpA-like domain RG43_RS06680 1be09d1927c9182209e97c0ccdc5fc51 160 PRINTS PR01021 OMPA domain signature 86 101 9.1E-11 T 09-03-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RG43_RS06680 1be09d1927c9182209e97c0ccdc5fc51 160 PRINTS PR01021 OMPA domain signature 101 117 9.1E-11 T 09-03-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RG43_RS06680 1be09d1927c9182209e97c0ccdc5fc51 160 PRINTS PR01021 OMPA domain signature 56 78 9.1E-11 T 09-03-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RG43_RS06680 1be09d1927c9182209e97c0ccdc5fc51 160 Gene3D G3DSA:3.30.1330.60 46 158 9.4E-30 T 09-03-2017 IPR006665 OmpA-like domain RG43_RS16495 5270c928b82a39db98b9559bae6f80c7 249 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 8 247 1.0E-137 T 09-03-2017 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823 RG43_RS16495 5270c928b82a39db98b9559bae6f80c7 249 Gene3D G3DSA:3.40.50.720 3 249 2.7E-79 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS16495 5270c928b82a39db98b9559bae6f80c7 249 SUPERFAMILY SSF69572 3 248 2.09E-87 T 09-03-2017 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RG43_RS16495 5270c928b82a39db98b9559bae6f80c7 249 Pfam PF00899 ThiF family 12 244 2.5E-64 T 09-03-2017 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RG43_RS14445 e76d2cf421d530036f7632cf4ec6ba0d 117 Pfam PF02635 DsrE/DsrF-like family 2 117 1.8E-23 T 09-03-2017 IPR003787 Sulphur relay, DsrE/F-like protein RG43_RS14445 e76d2cf421d530036f7632cf4ec6ba0d 117 Gene3D G3DSA:3.40.1260.10 1 117 1.1E-45 T 09-03-2017 IPR027396 DsrEFH-like RG43_RS14445 e76d2cf421d530036f7632cf4ec6ba0d 117 SUPERFAMILY SSF75169 1 117 1.57E-35 T 09-03-2017 IPR027396 DsrEFH-like RG43_RS13955 7a46ce910d901dd06fc2ce11f13513d3 387 Gene3D G3DSA:1.20.1250.20 205 383 1.3E-12 T 09-03-2017 RG43_RS13955 7a46ce910d901dd06fc2ce11f13513d3 387 Gene3D G3DSA:1.20.1250.20 10 190 3.0E-31 T 09-03-2017 RG43_RS13955 7a46ce910d901dd06fc2ce11f13513d3 387 Pfam PF07690 Major Facilitator Superfamily 15 352 5.3E-48 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS13955 7a46ce910d901dd06fc2ce11f13513d3 387 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 7 378 6.3E-84 T 09-03-2017 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 RG43_RS13955 7a46ce910d901dd06fc2ce11f13513d3 387 SUPERFAMILY SSF103473 8 379 4.19E-63 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS06325 ac38e61177ee2377038103cc8678a564 377 SUPERFAMILY SSF51905 5 301 5.12E-35 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS06325 ac38e61177ee2377038103cc8678a564 377 Gene3D G3DSA:3.50.50.60 4 104 7.9E-19 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS06325 ac38e61177ee2377038103cc8678a564 377 Gene3D G3DSA:3.50.50.60 105 300 9.8E-45 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS06325 ac38e61177ee2377038103cc8678a564 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 7.7E-20 T 09-03-2017 RG43_RS06325 ac38e61177ee2377038103cc8678a564 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 7.7E-20 T 09-03-2017 RG43_RS06325 ac38e61177ee2377038103cc8678a564 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 275 7.7E-20 T 09-03-2017 RG43_RS06325 ac38e61177ee2377038103cc8678a564 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 228 244 7.7E-20 T 09-03-2017 RG43_RS06325 ac38e61177ee2377038103cc8678a564 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 7.7E-20 T 09-03-2017 RG43_RS06325 ac38e61177ee2377038103cc8678a564 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 268 275 7.4E-14 T 09-03-2017 RG43_RS06325 ac38e61177ee2377038103cc8678a564 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 229 243 7.4E-14 T 09-03-2017 RG43_RS06325 ac38e61177ee2377038103cc8678a564 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 7.4E-14 T 09-03-2017 RG43_RS06325 ac38e61177ee2377038103cc8678a564 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 168 7.4E-14 T 09-03-2017 RG43_RS06325 ac38e61177ee2377038103cc8678a564 377 Hamap MF_01313 Nitric oxide reductase FlRd-NAD(+) reductase [norW]. 1 377 56.357 T 09-03-2017 IPR023961 Nitric oxide reductase FlRd-NAD(+) reductase GO:0016731|GO:0055114 RG43_RS06325 ac38e61177ee2377038103cc8678a564 377 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 278 3.5E-51 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS20285 c52acbaeb65c70b8f4d2d939aaa7efc7 155 ProDom PD034160 PRECURSOR SIGNAL YFJT INTERGENIC-REGION C0283 YKFB 1 141 9.0E-70 T 09-03-2017 RG43_RS16030 2e51831bd5af44198685ea29ced2c512 94 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 3.3E-19 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 RG43_RS16030 2e51831bd5af44198685ea29ced2c512 94 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 3.3E-19 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 RG43_RS16030 2e51831bd5af44198685ea29ced2c512 94 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 3.3E-19 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 RG43_RS16030 2e51831bd5af44198685ea29ced2c512 94 SUPERFAMILY SSF47729 1 91 6.92E-30 T 09-03-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RG43_RS16030 2e51831bd5af44198685ea29ced2c512 94 Gene3D G3DSA:4.10.520.10 1 91 2.4E-34 T 09-03-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RG43_RS16030 2e51831bd5af44198685ea29ced2c512 94 Pfam PF00216 Bacterial DNA-binding protein 1 91 1.6E-30 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 RG43_RS16030 2e51831bd5af44198685ea29ced2c512 94 SMART SM00411 1 91 1.6E-43 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 RG43_RS16030 2e51831bd5af44198685ea29ced2c512 94 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 30.437 T 09-03-2017 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 RG43_RS16030 2e51831bd5af44198685ea29ced2c512 94 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 09-03-2017 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 RG43_RS16030 2e51831bd5af44198685ea29ced2c512 94 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 93 6.3E-54 T 09-03-2017 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 RG43_RS17015 8896910db5d2e52eb62baa50e2691619 146 Pfam PF05772 NinB protein 3 128 9.9E-53 T 09-03-2017 IPR008711 Recombinase NinB RG43_RS17015 8896910db5d2e52eb62baa50e2691619 146 Gene3D G3DSA:1.10.3790.10 1 145 3.6E-63 T 09-03-2017 IPR008711 Recombinase NinB RG43_RS17015 8896910db5d2e52eb62baa50e2691619 146 SUPERFAMILY SSF103370 1 141 1.44E-56 T 09-03-2017 IPR008711 Recombinase NinB RG43_RS11630 7e55cabdb56eefba7044737095277517 321 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 242 312 5.9E-12 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RG43_RS11630 7e55cabdb56eefba7044737095277517 321 Pfam PF00970 Oxidoreductase FAD-binding domain 9 103 3.5E-6 T 09-03-2017 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 RG43_RS11630 7e55cabdb56eefba7044737095277517 321 Gene3D G3DSA:3.40.50.80 110 221 9.6E-30 T 09-03-2017 RG43_RS11630 7e55cabdb56eefba7044737095277517 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 80 94 2.1E-32 T 09-03-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 RG43_RS11630 7e55cabdb56eefba7044737095277517 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 31 41 2.1E-32 T 09-03-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 RG43_RS11630 7e55cabdb56eefba7044737095277517 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 94 108 2.1E-32 T 09-03-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 RG43_RS11630 7e55cabdb56eefba7044737095277517 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 141 150 2.1E-32 T 09-03-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 RG43_RS11630 7e55cabdb56eefba7044737095277517 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 193 201 2.1E-32 T 09-03-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 RG43_RS11630 7e55cabdb56eefba7044737095277517 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 116 135 2.1E-32 T 09-03-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 RG43_RS11630 7e55cabdb56eefba7044737095277517 321 Pfam PF00175 Oxidoreductase NAD-binding domain 117 207 6.6E-7 T 09-03-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 RG43_RS11630 7e55cabdb56eefba7044737095277517 321 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 270 278 - T 09-03-2017 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 RG43_RS11630 7e55cabdb56eefba7044737095277517 321 Gene3D G3DSA:2.40.30.10 5 104 4.1E-31 T 09-03-2017 RG43_RS11630 7e55cabdb56eefba7044737095277517 321 SUPERFAMILY SSF54292 218 321 2.23E-23 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RG43_RS11630 7e55cabdb56eefba7044737095277517 321 Gene3D G3DSA:3.10.20.30 222 319 6.6E-24 T 09-03-2017 IPR012675 Beta-grasp domain RG43_RS11630 7e55cabdb56eefba7044737095277517 321 SUPERFAMILY SSF52343 106 223 1.7E-27 T 09-03-2017 RG43_RS11630 7e55cabdb56eefba7044737095277517 321 SUPERFAMILY SSF63380 3 104 4.66E-26 T 09-03-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RG43_RS16055 6c7e39bb2e5109e5e8aee3c22766a1cb 362 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 361 51.689 T 09-03-2017 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 RG43_RS16055 6c7e39bb2e5109e5e8aee3c22766a1cb 362 Gene3D G3DSA:3.40.640.10 17 258 1.3E-103 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS16055 6c7e39bb2e5109e5e8aee3c22766a1cb 362 Pfam PF00266 Aminotransferase class-V 4 350 3.0E-76 T 09-03-2017 IPR000192 Aminotransferase class V domain RG43_RS16055 6c7e39bb2e5109e5e8aee3c22766a1cb 362 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 208 - T 09-03-2017 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site RG43_RS16055 6c7e39bb2e5109e5e8aee3c22766a1cb 362 PIRSF PIRSF000525 1 362 3.0E-150 T 09-03-2017 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 RG43_RS16055 6c7e39bb2e5109e5e8aee3c22766a1cb 362 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 361 2.4E-155 T 09-03-2017 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 RG43_RS16055 6c7e39bb2e5109e5e8aee3c22766a1cb 362 SUPERFAMILY SSF53383 4 362 1.54E-116 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS16055 6c7e39bb2e5109e5e8aee3c22766a1cb 362 Gene3D G3DSA:3.90.1150.10 260 361 4.2E-43 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RG43_RS08175 61cc6c39c487b2255261fb75e20125a2 378 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 357 47.779 T 09-03-2017 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181 RG43_RS08175 61cc6c39c487b2255261fb75e20125a2 378 Pfam PF11890 Domain of unknown function (DUF3410) 289 369 8.2E-28 T 09-03-2017 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181 RG43_RS08175 61cc6c39c487b2255261fb75e20125a2 378 SUPERFAMILY SSF52283 4 110 4.89E-18 T 09-03-2017 RG43_RS08175 61cc6c39c487b2255261fb75e20125a2 378 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 256 6.3E-33 T 09-03-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RG43_RS08175 61cc6c39c487b2255261fb75e20125a2 378 SUPERFAMILY SSF51735 91 257 3.75E-33 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS08175 61cc6c39c487b2255261fb75e20125a2 378 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 119 146 - T 09-03-2017 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RG43_RS08175 61cc6c39c487b2255261fb75e20125a2 378 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 197 213 - T 09-03-2017 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RG43_RS08175 61cc6c39c487b2255261fb75e20125a2 378 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 9 281 1.1E-17 T 09-03-2017 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 RG43_RS08175 61cc6c39c487b2255261fb75e20125a2 378 Gene3D G3DSA:3.40.50.720 113 259 5.6E-37 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS08175 61cc6c39c487b2255261fb75e20125a2 378 Gene3D G3DSA:3.40.50.720 2 112 9.6E-25 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS09145 e77c696fdc7549c10260cd02eda4826d 313 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 33 264 2.8E-89 T 09-03-2017 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 RG43_RS09145 e77c696fdc7549c10260cd02eda4826d 313 SUPERFAMILY SSF56601 6 280 1.59E-61 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like RG43_RS09145 e77c696fdc7549c10260cd02eda4826d 313 Gene3D G3DSA:3.40.710.10 28 280 2.5E-65 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like RG43_RS09145 e77c696fdc7549c10260cd02eda4826d 313 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 69 80 1.9E-13 T 09-03-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RG43_RS09145 e77c696fdc7549c10260cd02eda4826d 313 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 119 136 1.9E-13 T 09-03-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RG43_RS09145 e77c696fdc7549c10260cd02eda4826d 313 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 146 159 1.9E-13 T 09-03-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RG43_RS22965 aac18864971c74150c7c29432b5ba93f 548 ProSitePatterns PS00163 Fumarate lyases signature. 456 465 - T 09-03-2017 IPR020557 Fumarate lyase, conserved site GO:0003824 RG43_RS22965 aac18864971c74150c7c29432b5ba93f 548 PIRSF PIRSF001394 30 548 4.0E-236 T 09-03-2017 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 RG43_RS22965 aac18864971c74150c7c29432b5ba93f 548 Pfam PF05683 Fumarase C-terminus 332 537 7.9E-93 T 09-03-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 RG43_RS22965 aac18864971c74150c7c29432b5ba93f 548 SUPERFAMILY SSF117457 361 536 1.44E-61 T 09-03-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 RG43_RS22965 aac18864971c74150c7c29432b5ba93f 548 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 74 325 1.2E-33 T 09-03-2017 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 RG43_RS22965 aac18864971c74150c7c29432b5ba93f 548 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 373 537 9.3E-66 T 09-03-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 RG43_RS22965 aac18864971c74150c7c29432b5ba93f 548 Gene3D G3DSA:3.20.130.10 348 537 2.4E-75 T 09-03-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 RG43_RS22965 aac18864971c74150c7c29432b5ba93f 548 Pfam PF05681 Fumarate hydratase (Fumerase) 51 326 1.4E-88 T 09-03-2017 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 RG43_RS11835 aa2622e1fb880c4f15fdf7015f35b811 217 Gene3D G3DSA:3.40.50.300 1 198 2.3E-49 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS11835 aa2622e1fb880c4f15fdf7015f35b811 217 SMART SM00382 26 214 9.4E-8 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS11835 aa2622e1fb880c4f15fdf7015f35b811 217 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS11835 aa2622e1fb880c4f15fdf7015f35b811 217 Pfam PF00005 ABC transporter 17 161 1.1E-28 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS11835 aa2622e1fb880c4f15fdf7015f35b811 217 SUPERFAMILY SSF52540 1 198 2.26E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16630 f5a5eaeb00319103fde05c083c56447a 225 SMART SM00702 1 176 5.4E-34 T 09-03-2017 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 RG43_RS16630 f5a5eaeb00319103fde05c083c56447a 225 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 225 45.638 T 09-03-2017 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 RG43_RS16630 f5a5eaeb00319103fde05c083c56447a 225 SUPERFAMILY SSF51197 4 177 5.33E-9 T 09-03-2017 RG43_RS16630 f5a5eaeb00319103fde05c083c56447a 225 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 84 175 6.8E-15 T 09-03-2017 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 RG43_RS21380 2ac611afd4e9ae21749323a5914c9e0e 261 Gene3D G3DSA:1.10.12.10 200 261 1.8E-20 T 09-03-2017 IPR014748 Crontonase, C-terminal RG43_RS21380 2ac611afd4e9ae21749323a5914c9e0e 261 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 09-03-2017 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 RG43_RS21380 2ac611afd4e9ae21749323a5914c9e0e 261 SUPERFAMILY SSF52096 2 261 7.18E-79 T 09-03-2017 IPR029045 ClpP/crotonase-like domain RG43_RS21380 2ac611afd4e9ae21749323a5914c9e0e 261 Hamap MF_01051 Carnitinyl-CoA dehydratase [caiD]. 1 261 73.627 T 09-03-2017 IPR022852 Carnitinyl-CoA dehydratase GO:0016836 RG43_RS21380 2ac611afd4e9ae21749323a5914c9e0e 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 260 6.5E-87 T 09-03-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RG43_RS21380 2ac611afd4e9ae21749323a5914c9e0e 261 Gene3D G3DSA:3.90.226.10 2 196 1.4E-67 T 09-03-2017 IPR029045 ClpP/crotonase-like domain RG43_RS03160 77355421f1b6ac4c77f612daca7c3ad9 629 Pfam PF00270 DEAD/DEAH box helicase 31 195 6.2E-52 T 09-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RG43_RS03160 77355421f1b6ac4c77f612daca7c3ad9 629 Gene3D G3DSA:3.40.50.300 6 207 6.7E-82 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS03160 77355421f1b6ac4c77f612daca7c3ad9 629 Pfam PF00271 Helicase conserved C-terminal domain 232 340 6.8E-29 T 09-03-2017 IPR001650 Helicase, C-terminal RG43_RS03160 77355421f1b6ac4c77f612daca7c3ad9 629 SMART SM00490 259 340 4.8E-32 T 09-03-2017 IPR001650 Helicase, C-terminal RG43_RS03160 77355421f1b6ac4c77f612daca7c3ad9 629 Pfam PF12343 Cold shock protein DEAD box A 568 629 7.0E-12 T 09-03-2017 IPR021046 Cold-shock protein, DEAD box A, C-terminal GO:0016817 RG43_RS03160 77355421f1b6ac4c77f612daca7c3ad9 629 SUPERFAMILY SSF52540 75 361 3.81E-73 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS03160 77355421f1b6ac4c77f612daca7c3ad9 629 Gene3D G3DSA:3.40.50.300 208 375 1.8E-52 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS03160 77355421f1b6ac4c77f612daca7c3ad9 629 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 09-03-2017 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site RG43_RS03160 77355421f1b6ac4c77f612daca7c3ad9 629 SMART SM00487 25 223 4.7E-65 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain RG43_RS03160 77355421f1b6ac4c77f612daca7c3ad9 629 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 1 560 47.28 T 09-03-2017 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 RG43_RS03160 77355421f1b6ac4c77f612daca7c3ad9 629 Pfam PF03880 DbpA RNA binding domain 489 558 2.0E-20 T 09-03-2017 IPR005580 DbpA, RNA-binding domain RG43_RS06480 2fb72b8eea4a0a6bcc30946d8cc3eca2 394 Pfam PF07690 Major Facilitator Superfamily 17 192 3.8E-24 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS06480 2fb72b8eea4a0a6bcc30946d8cc3eca2 394 Pfam PF07690 Major Facilitator Superfamily 218 385 7.7E-11 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS06480 2fb72b8eea4a0a6bcc30946d8cc3eca2 394 SUPERFAMILY SSF103473 9 388 3.92E-54 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS06480 2fb72b8eea4a0a6bcc30946d8cc3eca2 394 Gene3D G3DSA:1.20.1250.20 218 386 8.3E-10 T 09-03-2017 RG43_RS06480 2fb72b8eea4a0a6bcc30946d8cc3eca2 394 Gene3D G3DSA:1.20.1250.20 10 189 1.3E-24 T 09-03-2017 RG43_RS06505 58de3a6eddbbbcf6963f73b91bdcde68 319 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 97 113 - T 09-03-2017 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RG43_RS06505 58de3a6eddbbbcf6963f73b91bdcde68 319 PIRSF PIRSF000355 2 316 1.4E-78 T 09-03-2017 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RG43_RS06505 58de3a6eddbbbcf6963f73b91bdcde68 319 SUPERFAMILY SSF47240 6 319 7.46E-102 T 09-03-2017 IPR009078 Ferritin-like superfamily RG43_RS06505 58de3a6eddbbbcf6963f73b91bdcde68 319 Gene3D G3DSA:1.10.620.20 7 280 2.2E-89 T 09-03-2017 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: R-HSA-499943 RG43_RS06505 58de3a6eddbbbcf6963f73b91bdcde68 319 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 7 319 2.9E-143 T 09-03-2017 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RG43_RS06505 58de3a6eddbbbcf6963f73b91bdcde68 319 Pfam PF00268 Ribonucleotide reductase, small chain 9 280 1.1E-83 T 09-03-2017 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RG43_RS23475 9629a4275fde1abf3ebd5c44586ad8ab 396 Gene3D G3DSA:3.40.190.10 31 152 2.5E-24 T 09-03-2017 RG43_RS23475 9629a4275fde1abf3ebd5c44586ad8ab 396 PRINTS PR00181 Maltose binding protein signature 357 376 9.4E-101 T 09-03-2017 IPR006060 Maltose binding protein GO:0005363|GO:0015768 RG43_RS23475 9629a4275fde1abf3ebd5c44586ad8ab 396 PRINTS PR00181 Maltose binding protein signature 130 149 9.4E-101 T 09-03-2017 IPR006060 Maltose binding protein GO:0005363|GO:0015768 RG43_RS23475 9629a4275fde1abf3ebd5c44586ad8ab 396 PRINTS PR00181 Maltose binding protein signature 233 252 9.4E-101 T 09-03-2017 IPR006060 Maltose binding protein GO:0005363|GO:0015768 RG43_RS23475 9629a4275fde1abf3ebd5c44586ad8ab 396 PRINTS PR00181 Maltose binding protein signature 70 88 9.4E-101 T 09-03-2017 IPR006060 Maltose binding protein GO:0005363|GO:0015768 RG43_RS23475 9629a4275fde1abf3ebd5c44586ad8ab 396 PRINTS PR00181 Maltose binding protein signature 299 320 9.4E-101 T 09-03-2017 IPR006060 Maltose binding protein GO:0005363|GO:0015768 RG43_RS23475 9629a4275fde1abf3ebd5c44586ad8ab 396 PRINTS PR00181 Maltose binding protein signature 151 170 9.4E-101 T 09-03-2017 IPR006060 Maltose binding protein GO:0005363|GO:0015768 RG43_RS23475 9629a4275fde1abf3ebd5c44586ad8ab 396 PRINTS PR00181 Maltose binding protein signature 171 190 9.4E-101 T 09-03-2017 IPR006060 Maltose binding protein GO:0005363|GO:0015768 RG43_RS23475 9629a4275fde1abf3ebd5c44586ad8ab 396 PRINTS PR00181 Maltose binding protein signature 36 54 9.4E-101 T 09-03-2017 IPR006060 Maltose binding protein GO:0005363|GO:0015768 RG43_RS23475 9629a4275fde1abf3ebd5c44586ad8ab 396 Pfam PF13416 Bacterial extracellular solute-binding protein 50 344 9.4E-43 T 09-03-2017 RG43_RS23475 9629a4275fde1abf3ebd5c44586ad8ab 396 Gene3D G3DSA:3.40.190.10 153 322 5.2E-59 T 09-03-2017 RG43_RS23475 9629a4275fde1abf3ebd5c44586ad8ab 396 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 133 150 - T 09-03-2017 IPR006061 Solute-binding family 1, conserved site GO:0005215|GO:0006810 RG43_RS23475 9629a4275fde1abf3ebd5c44586ad8ab 396 SUPERFAMILY SSF53850 29 395 1.13E-99 T 09-03-2017 RG43_RS17745 f3cc5014904df4401c1f79a1c2be09a8 554 SUPERFAMILY SSF52402 210 479 1.18E-75 T 09-03-2017 RG43_RS17745 f3cc5014904df4401c1f79a1c2be09a8 554 Pfam PF13537 Glutamine amidotransferase domain 48 166 6.5E-42 T 09-03-2017 IPR017932 Glutamine amidotransferase type 2 domain RG43_RS17745 f3cc5014904df4401c1f79a1c2be09a8 554 SUPERFAMILY SSF56235 1 196 2.92E-58 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal RG43_RS17745 f3cc5014904df4401c1f79a1c2be09a8 554 Gene3D G3DSA:3.40.50.620 192 510 2.2E-120 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS17745 f3cc5014904df4401c1f79a1c2be09a8 554 Gene3D G3DSA:3.60.20.10 2 191 2.9E-68 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal RG43_RS17745 f3cc5014904df4401c1f79a1c2be09a8 554 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 371 2.7E-128 T 09-03-2017 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 RG43_RS17745 f3cc5014904df4401c1f79a1c2be09a8 554 Pfam PF00733 Asparagine synthase 211 511 7.3E-100 T 09-03-2017 IPR001962 Asparagine synthase GO:0004066|GO:0006529 RG43_RS18110 026b70eb9c167db316df187dcf0e8b81 285 Gene3D G3DSA:3.40.50.850 1 229 1.9E-77 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RG43_RS18110 026b70eb9c167db316df187dcf0e8b81 285 SUPERFAMILY SSF47336 209 280 3.93E-8 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain RG43_RS18110 026b70eb9c167db316df187dcf0e8b81 285 SUPERFAMILY SSF52499 1 209 1.28E-64 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RG43_RS18110 026b70eb9c167db316df187dcf0e8b81 285 Pfam PF00857 Isochorismatase family 32 205 3.4E-38 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RG43_RS18110 026b70eb9c167db316df187dcf0e8b81 285 PIRSF PIRSF001111 1 285 1.8E-132 T 09-03-2017 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 RG43_RS18110 026b70eb9c167db316df187dcf0e8b81 285 Pfam PF00550 Phosphopantetheine attachment site 217 276 1.7E-7 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain RG43_RS18110 026b70eb9c167db316df187dcf0e8b81 285 Gene3D G3DSA:1.10.1200.10 230 282 1.3E-5 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain RG43_RS18110 026b70eb9c167db316df187dcf0e8b81 285 PRINTS PR01398 Isochorismatase signature 2 14 2.7E-51 T 09-03-2017 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 RG43_RS18110 026b70eb9c167db316df187dcf0e8b81 285 PRINTS PR01398 Isochorismatase signature 168 186 2.7E-51 T 09-03-2017 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 RG43_RS18110 026b70eb9c167db316df187dcf0e8b81 285 PRINTS PR01398 Isochorismatase signature 112 134 2.7E-51 T 09-03-2017 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 RG43_RS18110 026b70eb9c167db316df187dcf0e8b81 285 PRINTS PR01398 Isochorismatase signature 80 99 2.7E-51 T 09-03-2017 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 RG43_RS18110 026b70eb9c167db316df187dcf0e8b81 285 PRINTS PR01398 Isochorismatase signature 186 203 2.7E-51 T 09-03-2017 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 RG43_RS18110 026b70eb9c167db316df187dcf0e8b81 285 PRINTS PR01398 Isochorismatase signature 63 80 2.7E-51 T 09-03-2017 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 RG43_RS10255 2a7ed7b5dd6b65d388f8f5db2d0604be 62 ProDom PD053043 DIVISION CELL INHIBITION INHIBITOR ENCODED DICB PROPHAGE BY WITHIN CP- 1 62 7.0E-27 T 09-03-2017 IPR008022 DicB RG43_RS10255 2a7ed7b5dd6b65d388f8f5db2d0604be 62 Pfam PF05358 DicB protein 1 60 2.2E-41 T 09-03-2017 IPR008022 DicB RG43_RS10080 05a1f2176f9be9b428d86ac57140002c 359 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 13 349 34.221 T 09-03-2017 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 RG43_RS10080 05a1f2176f9be9b428d86ac57140002c 359 Gene3D G3DSA:3.40.50.10210 74 330 2.8E-103 T 09-03-2017 RG43_RS10080 05a1f2176f9be9b428d86ac57140002c 359 Pfam PF02277 Phosphoribosyltransferase 11 345 9.4E-119 T 09-03-2017 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 RG43_RS10080 05a1f2176f9be9b428d86ac57140002c 359 SUPERFAMILY SSF52733 6 344 2.49E-112 T 09-03-2017 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 RG43_RS10080 05a1f2176f9be9b428d86ac57140002c 359 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 15 346 1.0E-117 T 09-03-2017 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 RG43_RS10080 05a1f2176f9be9b428d86ac57140002c 359 Gene3D G3DSA:1.10.1610.10 1 73 5.9E-30 T 09-03-2017 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 RG43_RS02255 329dd917b7479daf246d50f2cdcec458 156 PIRSF PIRSF002122 3 156 1.5E-63 T 09-03-2017 IPR000235 Ribosomal protein S5/S7 GO:0006412 RG43_RS02255 329dd917b7479daf246d50f2cdcec458 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 1.1E-64 T 09-03-2017 IPR023798 Ribosomal protein S7 domain RG43_RS02255 329dd917b7479daf246d50f2cdcec458 156 SUPERFAMILY SSF47973 6 149 6.15E-60 T 09-03-2017 IPR023798 Ribosomal protein S7 domain RG43_RS02255 329dd917b7479daf246d50f2cdcec458 156 Gene3D G3DSA:1.10.455.10 8 156 2.9E-67 T 09-03-2017 IPR023798 Ribosomal protein S7 domain RG43_RS02255 329dd917b7479daf246d50f2cdcec458 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.173 T 09-03-2017 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 RG43_RS02255 329dd917b7479daf246d50f2cdcec458 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 09-03-2017 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02255 329dd917b7479daf246d50f2cdcec458 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 2.6E-71 T 09-03-2017 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 RG43_RS23620 aaf0e06f6bfe6c5512005a61f18a8af2 309 PIRSF PIRSF000450 1 308 3.8E-148 T 09-03-2017 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 RG43_RS23620 aaf0e06f6bfe6c5512005a61f18a8af2 309 Pfam PF04204 Homoserine O-succinyltransferase 2 299 1.3E-131 T 09-03-2017 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 RG43_RS23620 aaf0e06f6bfe6c5512005a61f18a8af2 309 Gene3D G3DSA:3.40.50.880 34 301 3.1E-122 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like RG43_RS23620 aaf0e06f6bfe6c5512005a61f18a8af2 309 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 1.0E-149 T 09-03-2017 RG43_RS23620 aaf0e06f6bfe6c5512005a61f18a8af2 309 SUPERFAMILY SSF52317 17 297 3.71E-100 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like RG43_RS23620 aaf0e06f6bfe6c5512005a61f18a8af2 309 Hamap MF_00295 Homoserine O-succinyltransferase [metA]. 1 301 53.481 T 09-03-2017 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 RG43_RS23620 aaf0e06f6bfe6c5512005a61f18a8af2 309 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 302 7.1E-169 T 09-03-2017 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 RG43_RS08610 044ea1439d4e562709786790d43e0b17 240 Pfam PF13489 Methyltransferase domain 57 170 4.3E-25 T 09-03-2017 RG43_RS08610 044ea1439d4e562709786790d43e0b17 240 SUPERFAMILY SSF53335 17 224 2.67E-44 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS08610 044ea1439d4e562709786790d43e0b17 240 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 16 234 9.4E-91 T 09-03-2017 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 RG43_RS08610 044ea1439d4e562709786790d43e0b17 240 Gene3D G3DSA:3.40.50.150 28 222 3.5E-45 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS08610 044ea1439d4e562709786790d43e0b17 240 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 14 240 38.429 T 09-03-2017 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 RG43_RS25615 b30ce09bc7c4b1d35e8b7ca02a233192 24 Pfam PF08053 Tryptophanase operon leader peptide 1 24 2.5E-20 T 09-03-2017 IPR012620 Tryptophanese operon leader peptide GO:0031554|GO:0031556 RG43_RS25615 b30ce09bc7c4b1d35e8b7ca02a233192 24 TIGRFAM TIGR02616 tnaC_leader: tryptophanase leader peptide 3 24 2.8E-12 T 09-03-2017 IPR012620 Tryptophanese operon leader peptide GO:0031554|GO:0031556 RG43_RS16850 68674eaa3fabe238cd8dcb1c6537f86a 213 Pfam PF06805 Bacteriophage lambda tail assembly protein I 14 97 2.9E-29 T 09-03-2017 IPR010654 Bacteriophage lambda tail assembly I RG43_RS00505 b744a8cb5333393e86486e819420b7f2 287 Pfam PF03755 YicC-like family, N-terminal region 2 153 2.2E-43 T 09-03-2017 IPR013527 YicC-like, N-terminal RG43_RS00505 b744a8cb5333393e86486e819420b7f2 287 Pfam PF08340 Domain of unknown function (DUF1732) 203 287 3.0E-34 T 09-03-2017 IPR013551 Domain of unknown function DUF1732 RG43_RS00505 b744a8cb5333393e86486e819420b7f2 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 3.9E-138 T 09-03-2017 IPR005229 Conserved hypothetical protein CHP00255 RG43_RS07560 bf7c0211457e35636f6dcd70efc4157e 141 Gene3D G3DSA:3.40.630.30 1 123 8.0E-35 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS07560 bf7c0211457e35636f6dcd70efc4157e 141 Hamap MF_01127 Acetyltransferase YpeA [ypeA]. 1 141 46.559 T 09-03-2017 IPR023072 Acetyltransferase, YpeA GO:0016747 RG43_RS07560 bf7c0211457e35636f6dcd70efc4157e 141 Pfam PF00583 Acetyltransferase (GNAT) family 48 124 7.0E-16 T 09-03-2017 IPR000182 GNAT domain GO:0008080 RG43_RS07560 bf7c0211457e35636f6dcd70efc4157e 141 SUPERFAMILY SSF55729 1 128 7.69E-30 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS02785 1062621ed99d416d9d264916ad240b05 90 SUPERFAMILY SSF52038 1 89 2.75E-30 T 09-03-2017 IPR000468 Barstar (barnase inhibitor) RG43_RS02785 1062621ed99d416d9d264916ad240b05 90 Gene3D G3DSA:3.30.370.10 1 85 1.4E-14 T 09-03-2017 IPR000468 Barstar (barnase inhibitor) RG43_RS02785 1062621ed99d416d9d264916ad240b05 90 Pfam PF01337 Barstar (barnase inhibitor) 5 79 5.3E-5 T 09-03-2017 IPR000468 Barstar (barnase inhibitor) RG43_RS04080 597f0a8060e56ee570538bd97212efad 327 SUPERFAMILY SSF81345 3 324 1.83E-75 T 09-03-2017 IPR029022 ABC transporter, BtuC-like RG43_RS04080 597f0a8060e56ee570538bd97212efad 327 Gene3D G3DSA:1.10.3470.10 2 324 3.2E-91 T 09-03-2017 IPR029022 ABC transporter, BtuC-like RG43_RS04080 597f0a8060e56ee570538bd97212efad 327 Pfam PF01032 FecCD transport family 14 323 1.2E-86 T 09-03-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 RG43_RS26455 597f0a8060e56ee570538bd97212efad 327 SUPERFAMILY SSF81345 3 324 1.83E-75 T 09-03-2017 IPR029022 ABC transporter, BtuC-like RG43_RS26455 597f0a8060e56ee570538bd97212efad 327 Gene3D G3DSA:1.10.3470.10 2 324 3.2E-91 T 09-03-2017 IPR029022 ABC transporter, BtuC-like RG43_RS26455 597f0a8060e56ee570538bd97212efad 327 Pfam PF01032 FecCD transport family 14 323 1.2E-86 T 09-03-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 RG43_RS25365 51be117e54ea350e7ab4780374f17d15 330 SUPERFAMILY SSF53822 61 329 2.9E-89 T 09-03-2017 IPR028082 Periplasmic binding protein-like I RG43_RS25365 51be117e54ea350e7ab4780374f17d15 330 Gene3D G3DSA:1.10.260.40 2 53 3.2E-25 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS25365 51be117e54ea350e7ab4780374f17d15 330 SUPERFAMILY SSF47413 2 59 3.26E-17 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS25365 51be117e54ea350e7ab4780374f17d15 330 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 6.9E-21 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS25365 51be117e54ea350e7ab4780374f17d15 330 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.2E-6 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS25365 51be117e54ea350e7ab4780374f17d15 330 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.2E-6 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS25365 51be117e54ea350e7ab4780374f17d15 330 SMART SM00354 1 71 1.9E-35 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS25365 51be117e54ea350e7ab4780374f17d15 330 Pfam PF13377 Periplasmic binding protein-like domain 169 329 1.1E-40 T 09-03-2017 RG43_RS25365 51be117e54ea350e7ab4780374f17d15 330 Gene3D G3DSA:3.40.50.2300 177 306 3.4E-54 T 09-03-2017 RG43_RS25365 51be117e54ea350e7ab4780374f17d15 330 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 09-03-2017 RG43_RS25365 51be117e54ea350e7ab4780374f17d15 330 Gene3D G3DSA:3.40.50.2300 54 176 4.7E-43 T 09-03-2017 RG43_RS15785 5739cfae8f9666f39c14c877c691a763 684 Pfam PF00580 UvrD/REP helicase N-terminal domain 197 490 2.3E-43 T 09-03-2017 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RG43_RS15785 5739cfae8f9666f39c14c877c691a763 684 Pfam PF13361 UvrD-like helicase C-terminal domain 543 659 1.4E-13 T 09-03-2017 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RG43_RS15785 5739cfae8f9666f39c14c877c691a763 684 Gene3D G3DSA:3.40.50.300 500 675 6.3E-23 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS15785 5739cfae8f9666f39c14c877c691a763 684 Gene3D G3DSA:3.40.50.300 395 492 3.1E-61 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS15785 5739cfae8f9666f39c14c877c691a763 684 Gene3D G3DSA:3.40.50.300 196 329 3.1E-61 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS15785 5739cfae8f9666f39c14c877c691a763 684 SUPERFAMILY SSF52540 195 330 1.37E-83 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS15785 5739cfae8f9666f39c14c877c691a763 684 SUPERFAMILY SSF52540 385 676 1.37E-83 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS15785 5739cfae8f9666f39c14c877c691a763 684 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 164 4.4E-62 T 09-03-2017 IPR022161 DNA helicase IV, N-terminal domain RG43_RS01600 cafcc21933d39177ad162ef0d8803271 127 Gene3D G3DSA:3.40.630.30 27 87 3.8E-7 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS01600 cafcc21933d39177ad162ef0d8803271 127 Hamap MF_02018 PanD maturation factor [panM]. 1 126 32.39 T 09-03-2017 IPR032900 PanD maturation factor PanM GO:0015940|GO:0031638 RG43_RS01600 cafcc21933d39177ad162ef0d8803271 127 SUPERFAMILY SSF55729 6 120 6.86E-9 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS01600 cafcc21933d39177ad162ef0d8803271 127 Pfam PF12568 Acetyltransferase (GNAT) domain 2 125 1.1E-49 T 09-03-2017 IPR000182 GNAT domain GO:0008080 RG43_RS07125 ecad0a2b61665c6066ff039f2211b326 128 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 126 5.3E-72 T 09-03-2017 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 RG43_RS07125 ecad0a2b61665c6066ff039f2211b326 128 Gene3D G3DSA:3.90.1010.10 2 126 1.0E-57 T 09-03-2017 RG43_RS07125 ecad0a2b61665c6066ff039f2211b326 128 SUPERFAMILY SSF82649 1 125 1.2E-49 T 09-03-2017 RG43_RS07125 ecad0a2b61665c6066ff039f2211b326 128 Pfam PF01592 NifU-like N terminal domain 2 126 1.0E-57 T 09-03-2017 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 RG43_RS23430 e4d26b48161240273455ecf80e7e407a 807 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 807 34.014 T 09-03-2017 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 RG43_RS23430 e4d26b48161240273455ecf80e7e407a 807 SMART SM00563 300 427 1.1E-27 T 09-03-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RG43_RS23430 e4d26b48161240273455ecf80e7e407a 807 PIRSF PIRSF000437 19 807 0.0 T 09-03-2017 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 RG43_RS23430 e4d26b48161240273455ecf80e7e407a 807 PIRSF PIRSF500064 2 807 0.0 T 09-03-2017 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 RG43_RS23430 e4d26b48161240273455ecf80e7e407a 807 Pfam PF01553 Acyltransferase 282 424 4.4E-26 T 09-03-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RG43_RS23430 e4d26b48161240273455ecf80e7e407a 807 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 799 0.0 T 09-03-2017 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 RG43_RS23430 e4d26b48161240273455ecf80e7e407a 807 SUPERFAMILY SSF69593 245 482 3.66E-23 T 09-03-2017 RG43_RS13145 ce57e563d2a484e580c09854d14c2e25 45 ProDom PD049510 RIBOSOMAL S22 30S RIBONUCLEOPROTEIN SUBUNIT D RIBOSOME- SEQUENCING DIRECT ASSOCIATED 1 45 2.0E-19 T 09-03-2017 IPR012607 Ribosomal protein S22 GO:0003735|GO:0005840|GO:0006412 RG43_RS13145 ce57e563d2a484e580c09854d14c2e25 45 Pfam PF08136 30S ribosomal protein subunit S22 family 1 44 1.8E-31 T 09-03-2017 IPR012607 Ribosomal protein S22 GO:0003735|GO:0005840|GO:0006412 RG43_RS02960 9e16eff5a04c7b0ce378fdc814bd2127 185 Pfam PF03968 OstA-like protein 37 149 1.6E-32 T 09-03-2017 IPR005653 Organic solvent tolerance-like, N-terminal RG43_RS02960 9e16eff5a04c7b0ce378fdc814bd2127 185 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 7 167 27.239 T 09-03-2017 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 RG43_RS02960 9e16eff5a04c7b0ce378fdc814bd2127 185 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 28 166 9.6E-52 T 09-03-2017 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 RG43_RS02960 9e16eff5a04c7b0ce378fdc814bd2127 185 Gene3D G3DSA:2.60.450.10 29 163 4.9E-43 T 09-03-2017 RG43_RS26625 29eea6a04eac805723cbb3c52b5c9e5f 328 Gene3D G3DSA:3.30.70.20 38 116 9.4E-25 T 09-03-2017 RG43_RS26625 29eea6a04eac805723cbb3c52b5c9e5f 328 Gene3D G3DSA:3.30.70.20 188 229 9.4E-25 T 09-03-2017 RG43_RS26625 29eea6a04eac805723cbb3c52b5c9e5f 328 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 1 26 3.1E-4 T 09-03-2017 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RG43_RS26625 29eea6a04eac805723cbb3c52b5c9e5f 328 SUPERFAMILY SSF54862 38 325 8.37E-72 T 09-03-2017 RG43_RS26625 29eea6a04eac805723cbb3c52b5c9e5f 328 Pfam PF13247 4Fe-4S dicluster domain 105 207 5.1E-23 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS26625 29eea6a04eac805723cbb3c52b5c9e5f 328 Gene3D G3DSA:3.30.70.20 117 149 3.0E-12 T 09-03-2017 RG43_RS26625 29eea6a04eac805723cbb3c52b5c9e5f 328 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 145 156 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS26625 29eea6a04eac805723cbb3c52b5c9e5f 328 Gene3D G3DSA:3.30.70.20 150 187 4.7E-9 T 09-03-2017 RG43_RS04250 29eea6a04eac805723cbb3c52b5c9e5f 328 Gene3D G3DSA:3.30.70.20 38 116 9.4E-25 T 09-03-2017 RG43_RS04250 29eea6a04eac805723cbb3c52b5c9e5f 328 Gene3D G3DSA:3.30.70.20 188 229 9.4E-25 T 09-03-2017 RG43_RS04250 29eea6a04eac805723cbb3c52b5c9e5f 328 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 1 26 3.1E-4 T 09-03-2017 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RG43_RS04250 29eea6a04eac805723cbb3c52b5c9e5f 328 SUPERFAMILY SSF54862 38 325 8.37E-72 T 09-03-2017 RG43_RS04250 29eea6a04eac805723cbb3c52b5c9e5f 328 Pfam PF13247 4Fe-4S dicluster domain 105 207 5.1E-23 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS04250 29eea6a04eac805723cbb3c52b5c9e5f 328 Gene3D G3DSA:3.30.70.20 117 149 3.0E-12 T 09-03-2017 RG43_RS04250 29eea6a04eac805723cbb3c52b5c9e5f 328 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 145 156 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS04250 29eea6a04eac805723cbb3c52b5c9e5f 328 Gene3D G3DSA:3.30.70.20 150 187 4.7E-9 T 09-03-2017 RG43_RS23155 614b666e07e5dafa239b4d5bd422a691 311 Pfam PF13407 Periplasmic binding protein domain 28 288 9.4E-59 T 09-03-2017 IPR025997 Periplasmic binding protein RG43_RS23155 614b666e07e5dafa239b4d5bd422a691 311 Gene3D G3DSA:3.40.50.2300 27 150 3.6E-30 T 09-03-2017 RG43_RS23155 614b666e07e5dafa239b4d5bd422a691 311 SUPERFAMILY SSF53822 28 310 1.85E-72 T 09-03-2017 IPR028082 Periplasmic binding protein-like I RG43_RS23155 614b666e07e5dafa239b4d5bd422a691 311 Gene3D G3DSA:3.40.50.2300 151 311 1.1E-47 T 09-03-2017 RG43_RS15645 ab52a56d701f4b8ec4f64047f13642de 70 Gene3D G3DSA:2.40.50.140 5 69 5.0E-15 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS15645 ab52a56d701f4b8ec4f64047f13642de 70 SMART SM00357 6 70 5.3E-17 T 09-03-2017 IPR011129 Cold shock protein GO:0003676 RG43_RS15645 ab52a56d701f4b8ec4f64047f13642de 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 1.2E-22 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RG43_RS15645 ab52a56d701f4b8ec4f64047f13642de 70 PIRSF PIRSF002599 1 70 5.7E-13 T 09-03-2017 IPR012156 Cold shock, CspA GO:0003676 RG43_RS15645 ab52a56d701f4b8ec4f64047f13642de 70 SUPERFAMILY SSF50249 4 69 1.93E-14 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS15645 ab52a56d701f4b8ec4f64047f13642de 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 09-03-2017 IPR019844 Cold-shock conserved site RG43_RS03945 7a0ee251aebd17f34ee42e9d84f7869d 217 Gene3D G3DSA:3.90.870.10 10 214 4.2E-95 T 09-03-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain RG43_RS03945 7a0ee251aebd17f34ee42e9d84f7869d 217 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 17 208 9.0E-83 T 09-03-2017 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RG43_RS03945 7a0ee251aebd17f34ee42e9d84f7869d 217 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 13 209 1.1E-86 T 09-03-2017 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RG43_RS03945 7a0ee251aebd17f34ee42e9d84f7869d 217 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 11 213 43.303 T 09-03-2017 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RG43_RS03945 7a0ee251aebd17f34ee42e9d84f7869d 217 SUPERFAMILY SSF55821 7 213 5.04E-86 T 09-03-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain RG43_RS26320 7a0ee251aebd17f34ee42e9d84f7869d 217 Gene3D G3DSA:3.90.870.10 10 214 4.2E-95 T 09-03-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain RG43_RS26320 7a0ee251aebd17f34ee42e9d84f7869d 217 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 17 208 9.0E-83 T 09-03-2017 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RG43_RS26320 7a0ee251aebd17f34ee42e9d84f7869d 217 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 13 209 1.1E-86 T 09-03-2017 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RG43_RS26320 7a0ee251aebd17f34ee42e9d84f7869d 217 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 11 213 43.303 T 09-03-2017 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RG43_RS26320 7a0ee251aebd17f34ee42e9d84f7869d 217 SUPERFAMILY SSF55821 7 213 5.04E-86 T 09-03-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain RG43_RS17715 b3627cd53fc2f1397a3f6ef49eba52e1 554 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 2.4E-9 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 RG43_RS17715 b3627cd53fc2f1397a3f6ef49eba52e1 554 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 2.4E-9 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 RG43_RS17715 b3627cd53fc2f1397a3f6ef49eba52e1 554 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 2.4E-9 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 RG43_RS17715 b3627cd53fc2f1397a3f6ef49eba52e1 554 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 2.4E-9 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 RG43_RS17715 b3627cd53fc2f1397a3f6ef49eba52e1 554 Gene3D G3DSA:2.40.240.10 348 461 1.1E-49 T 09-03-2017 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 RG43_RS17715 b3627cd53fc2f1397a3f6ef49eba52e1 554 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 551 0.0 T 09-03-2017 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RG43_RS17715 b3627cd53fc2f1397a3f6ef49eba52e1 554 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 8.8E-129 T 09-03-2017 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 RG43_RS17715 b3627cd53fc2f1397a3f6ef49eba52e1 554 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 09-03-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS17715 b3627cd53fc2f1397a3f6ef49eba52e1 554 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 528 2.4E-63 T 09-03-2017 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 RG43_RS17715 b3627cd53fc2f1397a3f6ef49eba52e1 554 SUPERFAMILY SSF52374 10 337 6.17E-104 T 09-03-2017 RG43_RS17715 b3627cd53fc2f1397a3f6ef49eba52e1 554 SUPERFAMILY SSF50715 340 547 6.8E-81 T 09-03-2017 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 RG43_RS17715 b3627cd53fc2f1397a3f6ef49eba52e1 554 Gene3D G3DSA:3.40.50.620 27 96 4.1E-43 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS17715 b3627cd53fc2f1397a3f6ef49eba52e1 554 Gene3D G3DSA:3.40.50.620 212 262 4.1E-43 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS17715 b3627cd53fc2f1397a3f6ef49eba52e1 554 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 549 53.936 T 09-03-2017 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 RG43_RS17715 b3627cd53fc2f1397a3f6ef49eba52e1 554 Gene3D G3DSA:2.40.240.10 462 547 4.6E-35 T 09-03-2017 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 RG43_RS17715 b3627cd53fc2f1397a3f6ef49eba52e1 554 Gene3D G3DSA:3.90.800.10 101 209 1.8E-48 T 09-03-2017 RG43_RS17715 b3627cd53fc2f1397a3f6ef49eba52e1 554 Gene3D G3DSA:1.10.1160.10 263 338 6.2E-39 T 09-03-2017 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 RG43_RS07940 68dfd77e9ed3cbabcffaba1c259f78f1 477 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 29 42 - T 09-03-2017 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 RG43_RS07940 68dfd77e9ed3cbabcffaba1c259f78f1 477 SUPERFAMILY SSF49899 331 476 7.12E-29 T 09-03-2017 IPR013320 Concanavalin A-like lectin/glucanase domain RG43_RS07940 68dfd77e9ed3cbabcffaba1c259f78f1 477 SMART SM00640 29 440 9.0E-152 T 09-03-2017 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 RG43_RS07940 68dfd77e9ed3cbabcffaba1c259f78f1 477 Gene3D G3DSA:2.60.120.560 328 476 5.2E-31 T 09-03-2017 IPR013189 Glycosyl hydrolase family 32, C-terminal RG43_RS07940 68dfd77e9ed3cbabcffaba1c259f78f1 477 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 415 440 3.0E-5 T 09-03-2017 IPR013189 Glycosyl hydrolase family 32, C-terminal RG43_RS07940 68dfd77e9ed3cbabcffaba1c259f78f1 477 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 20 451 6.9E-144 T 09-03-2017 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 RG43_RS07940 68dfd77e9ed3cbabcffaba1c259f78f1 477 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 29 330 7.3E-102 T 09-03-2017 IPR013148 Glycosyl hydrolase family 32, N-terminal RG43_RS07940 68dfd77e9ed3cbabcffaba1c259f78f1 477 Gene3D G3DSA:2.115.10.20 35 327 3.4E-25 T 09-03-2017 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain RG43_RS07940 68dfd77e9ed3cbabcffaba1c259f78f1 477 SUPERFAMILY SSF75005 22 331 1.49E-110 T 09-03-2017 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain RG43_RS20505 28a7814aeb6b097d83e34aff5982e20b 271 Gene3D G3DSA:3.40.190.10 30 162 2.9E-61 T 09-03-2017 RG43_RS20505 28a7814aeb6b097d83e34aff5982e20b 271 PIRSF PIRSF002854 1 271 6.8E-109 T 09-03-2017 IPR004872 Lipoprotein NlpA family RG43_RS20505 28a7814aeb6b097d83e34aff5982e20b 271 SUPERFAMILY SSF53850 33 271 5.31E-85 T 09-03-2017 RG43_RS20505 28a7814aeb6b097d83e34aff5982e20b 271 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 14 271 4.5E-153 T 09-03-2017 IPR004872 Lipoprotein NlpA family RG43_RS20505 28a7814aeb6b097d83e34aff5982e20b 271 Pfam PF03180 NLPA lipoprotein 33 271 4.1E-101 T 09-03-2017 IPR004872 Lipoprotein NlpA family RG43_RS02395 a7d6f728c27ff151616ca9b508e75108 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.555 T 09-03-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02395 a7d6f728c27ff151616ca9b508e75108 63 Pfam PF00831 Ribosomal L29 protein 4 60 5.7E-23 T 09-03-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02395 a7d6f728c27ff151616ca9b508e75108 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 4.3E-22 T 09-03-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02395 a7d6f728c27ff151616ca9b508e75108 63 SUPERFAMILY SSF46561 1 61 6.41E-22 T 09-03-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02395 a7d6f728c27ff151616ca9b508e75108 63 Gene3D G3DSA:1.10.287.310 1 60 5.4E-28 T 09-03-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02395 a7d6f728c27ff151616ca9b508e75108 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 09-03-2017 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS08575 20996583ca800641a68d2ca03503b22f 358 Gene3D G3DSA:3.20.20.190 32 355 7.2E-96 T 09-03-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RG43_RS08575 20996583ca800641a68d2ca03503b22f 358 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 36 350 5.7E-79 T 09-03-2017 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 RG43_RS08575 20996583ca800641a68d2ca03503b22f 358 SUPERFAMILY SSF51695 32 356 8.89E-95 T 09-03-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RG43_RS24075 779729355b39f0a9064b8cd257dc0f03 105 Gene3D G3DSA:1.10.140.10 2 105 3.0E-65 T 09-03-2017 IPR023453 Methionine repressor MetJ domain RG43_RS24075 779729355b39f0a9064b8cd257dc0f03 105 Hamap MF_00744 Met repressor [metJ]. 1 105 42.783 T 09-03-2017 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 RG43_RS24075 779729355b39f0a9064b8cd257dc0f03 105 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 4.0E-49 T 09-03-2017 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 RG43_RS24075 779729355b39f0a9064b8cd257dc0f03 105 SUPERFAMILY SSF47598 2 105 2.45E-58 T 09-03-2017 IPR010985 Ribbon-helix-helix GO:0006355 RG43_RS24075 779729355b39f0a9064b8cd257dc0f03 105 Pfam PF01340 Met Apo-repressor, MetJ 3 99 3.7E-59 T 09-03-2017 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 RG43_RS13040 5703fa2c38f3c9b32c2febd9b516fc6b 635 Pfam PF13953 PapC C-terminal domain 556 620 3.1E-22 T 09-03-2017 IPR025949 PapC-like, C-terminal domain RG43_RS13040 5703fa2c38f3c9b32c2febd9b516fc6b 635 Pfam PF00577 Outer membrane usher protein 1 547 1.5E-188 T 09-03-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 RG43_RS13040 5703fa2c38f3c9b32c2febd9b516fc6b 635 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 82 92 - T 09-03-2017 IPR018030 Fimbrial membrane usher, conserved site RG43_RS14495 ebe0a3fcfb3e5d36ef27b7a5954b597f 360 SUPERFAMILY SSF75620 12 353 7.32E-138 T 09-03-2017 RG43_RS14495 ebe0a3fcfb3e5d36ef27b7a5954b597f 360 Pfam PF03462 PCRF domain 13 203 2.5E-76 T 09-03-2017 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 RG43_RS14495 ebe0a3fcfb3e5d36ef27b7a5954b597f 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 09-03-2017 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RG43_RS14495 ebe0a3fcfb3e5d36ef27b7a5954b597f 360 Gene3D G3DSA:1.20.58.410 6 93 1.8E-18 T 09-03-2017 RG43_RS14495 ebe0a3fcfb3e5d36ef27b7a5954b597f 360 Gene3D G3DSA:3.30.160.20 215 288 1.6E-35 T 09-03-2017 IPR014720 Double-stranded RNA-binding domain RG43_RS14495 ebe0a3fcfb3e5d36ef27b7a5954b597f 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 358 3.0E-177 T 09-03-2017 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 RG43_RS14495 ebe0a3fcfb3e5d36ef27b7a5954b597f 360 Pfam PF00472 RF-1 domain 216 321 3.5E-41 T 09-03-2017 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RG43_RS14495 ebe0a3fcfb3e5d36ef27b7a5954b597f 360 SMART SM00937 63 178 6.8E-72 T 09-03-2017 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 RG43_RS14495 ebe0a3fcfb3e5d36ef27b7a5954b597f 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 41.334 T 09-03-2017 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 RG43_RS00695 2e239bbab2d56013edbb328d59d6c4f7 396 PIRSF PIRSF000138 2 379 2.2E-120 T 09-03-2017 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 RG43_RS00695 2e239bbab2d56013edbb328d59d6c4f7 396 SUPERFAMILY SSF51395 6 376 2.01E-99 T 09-03-2017 RG43_RS00695 2e239bbab2d56013edbb328d59d6c4f7 396 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 380 73.498 T 09-03-2017 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 RG43_RS00695 2e239bbab2d56013edbb328d59d6c4f7 396 Gene3D G3DSA:3.20.20.70 6 376 5.0E-134 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS00695 2e239bbab2d56013edbb328d59d6c4f7 396 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 09-03-2017 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 RG43_RS00695 2e239bbab2d56013edbb328d59d6c4f7 396 Pfam PF01070 FMN-dependent dehydrogenase 13 375 1.4E-124 T 09-03-2017 IPR000262 FMN-dependent dehydrogenase GO:0016491 RG43_RS04815 df21aeaa9b706a7b5c12d0bc5801835b 244 SUPERFAMILY SSF49354 28 150 3.4E-41 T 09-03-2017 IPR008962 PapD-like RG43_RS04815 df21aeaa9b706a7b5c12d0bc5801835b 244 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 104 121 - T 09-03-2017 IPR018046 Pili assembly chaperone, conserved site RG43_RS04815 df21aeaa9b706a7b5c12d0bc5801835b 244 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 169 226 3.6E-14 T 09-03-2017 IPR016148 Pili assembly chaperone, C-terminal RG43_RS04815 df21aeaa9b706a7b5c12d0bc5801835b 244 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 28 146 1.0E-36 T 09-03-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 RG43_RS04815 df21aeaa9b706a7b5c12d0bc5801835b 244 SUPERFAMILY SSF49584 152 240 1.96E-22 T 09-03-2017 IPR016148 Pili assembly chaperone, C-terminal RG43_RS04815 df21aeaa9b706a7b5c12d0bc5801835b 244 Gene3D G3DSA:2.60.40.360 28 147 6.5E-45 T 09-03-2017 IPR008962 PapD-like RG43_RS04815 df21aeaa9b706a7b5c12d0bc5801835b 244 Gene3D G3DSA:2.60.40.1070 151 239 2.1E-27 T 09-03-2017 IPR016148 Pili assembly chaperone, C-terminal RG43_RS04815 df21aeaa9b706a7b5c12d0bc5801835b 244 PRINTS PR00969 Pili chaperone signature 75 96 2.9E-33 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS04815 df21aeaa9b706a7b5c12d0bc5801835b 244 PRINTS PR00969 Pili chaperone signature 164 179 2.9E-33 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS04815 df21aeaa9b706a7b5c12d0bc5801835b 244 PRINTS PR00969 Pili chaperone signature 28 37 2.9E-33 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS04815 df21aeaa9b706a7b5c12d0bc5801835b 244 PRINTS PR00969 Pili chaperone signature 105 122 2.9E-33 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS04815 df21aeaa9b706a7b5c12d0bc5801835b 244 PRINTS PR00969 Pili chaperone signature 128 143 2.9E-33 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS18775 fe4a7d96e18dc979c368d035e3e9f83f 132 PIRSF PIRSF003230 1 132 7.4E-21 T 09-03-2017 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 RG43_RS18775 fe4a7d96e18dc979c368d035e3e9f83f 132 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 7 119 2.3E-36 T 09-03-2017 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 RG43_RS18775 fe4a7d96e18dc979c368d035e3e9f83f 132 Pfam PF13279 Thioesterase-like superfamily 11 118 1.4E-15 T 09-03-2017 RG43_RS18775 fe4a7d96e18dc979c368d035e3e9f83f 132 Gene3D G3DSA:3.10.129.10 2 131 9.0E-44 T 09-03-2017 IPR029069 HotDog domain RG43_RS18775 fe4a7d96e18dc979c368d035e3e9f83f 132 SUPERFAMILY SSF54637 3 129 1.21E-37 T 09-03-2017 IPR029069 HotDog domain RG43_RS02435 56aa23d4e137982cf428a6ee5372d2cc 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 26.115 T 09-03-2017 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS02435 56aa23d4e137982cf428a6ee5372d2cc 117 Gene3D G3DSA:3.30.420.100 24 117 6.9E-37 T 09-03-2017 RG43_RS02435 56aa23d4e137982cf428a6ee5372d2cc 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 7.5E-44 T 09-03-2017 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS02435 56aa23d4e137982cf428a6ee5372d2cc 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 2.9E-47 T 09-03-2017 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS02435 56aa23d4e137982cf428a6ee5372d2cc 117 SUPERFAMILY SSF53137 3 115 5.45E-54 T 09-03-2017 RG43_RS24980 8db6201a05d66e8c6694369a8f78b981 266 Gene3D G3DSA:3.30.1240.10 82 176 1.0E-17 T 09-03-2017 RG43_RS24980 8db6201a05d66e8c6694369a8f78b981 266 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 260 2.1E-70 T 09-03-2017 IPR000150 Cof protein GO:0016787 RG43_RS24980 8db6201a05d66e8c6694369a8f78b981 266 Gene3D G3DSA:3.40.50.1000 1 72 1.5E-56 T 09-03-2017 IPR023214 HAD-like domain RG43_RS24980 8db6201a05d66e8c6694369a8f78b981 266 Gene3D G3DSA:3.40.50.1000 177 265 1.5E-56 T 09-03-2017 IPR023214 HAD-like domain RG43_RS24980 8db6201a05d66e8c6694369a8f78b981 266 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 09-03-2017 IPR000150 Cof protein GO:0016787 RG43_RS24980 8db6201a05d66e8c6694369a8f78b981 266 SUPERFAMILY SSF56784 1 264 8.13E-69 T 09-03-2017 IPR023214 HAD-like domain RG43_RS24980 8db6201a05d66e8c6694369a8f78b981 266 ProSitePatterns PS01229 Hypothetical cof family signature 2. 212 234 - T 09-03-2017 RG43_RS24980 8db6201a05d66e8c6694369a8f78b981 266 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 231 1.3E-26 T 09-03-2017 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 RG43_RS24980 8db6201a05d66e8c6694369a8f78b981 266 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 260 1.8E-62 T 09-03-2017 IPR023214 HAD-like domain RG43_RS25275 e0dd1b3efaf5c83d551f35ec7bd88d93 514 SUPERFAMILY SSF55021 336 423 2.75E-28 T 09-03-2017 RG43_RS25275 e0dd1b3efaf5c83d551f35ec7bd88d93 514 Gene3D G3DSA:3.40.1020.10 339 512 2.0E-56 T 09-03-2017 RG43_RS25275 e0dd1b3efaf5c83d551f35ec7bd88d93 514 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 53 66 - T 09-03-2017 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 RG43_RS25275 e0dd1b3efaf5c83d551f35ec7bd88d93 514 SUPERFAMILY SSF53686 14 365 2.1E-101 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RG43_RS25275 e0dd1b3efaf5c83d551f35ec7bd88d93 514 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 329 419 2.7E-29 T 09-03-2017 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 RG43_RS25275 e0dd1b3efaf5c83d551f35ec7bd88d93 514 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 425 512 2.2E-26 T 09-03-2017 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 RG43_RS25275 e0dd1b3efaf5c83d551f35ec7bd88d93 514 Gene3D G3DSA:3.40.50.1100 81 333 3.3E-78 T 09-03-2017 RG43_RS25275 e0dd1b3efaf5c83d551f35ec7bd88d93 514 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 29 316 6.5E-77 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RG43_RS25275 e0dd1b3efaf5c83d551f35ec7bd88d93 514 SUPERFAMILY SSF55021 420 512 4.12E-25 T 09-03-2017 RG43_RS25275 e0dd1b3efaf5c83d551f35ec7bd88d93 514 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 15 512 7.5E-270 T 09-03-2017 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 RG43_RS09955 18f7d067a69b5b390b1d17ba6f158159 283 Pfam PF13276 HTH-like domain 43 96 6.2E-15 T 09-03-2017 IPR025948 HTH-like domain RG43_RS09955 18f7d067a69b5b390b1d17ba6f158159 283 Gene3D G3DSA:3.30.420.10 113 271 5.1E-29 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS09955 18f7d067a69b5b390b1d17ba6f158159 283 Pfam PF00665 Integrase core domain 119 234 8.8E-30 T 09-03-2017 IPR001584 Integrase, catalytic core GO:0015074 RG43_RS09955 18f7d067a69b5b390b1d17ba6f158159 283 SUPERFAMILY SSF53098 114 273 2.88E-36 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS02955 5b94fca7e3e7cf91dbf3e34e22a4c66b 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 236 1.6E-7 T 09-03-2017 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RG43_RS02955 5b94fca7e3e7cf91dbf3e34e22a4c66b 241 SMART SM00382 28 213 5.4E-10 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS02955 5b94fca7e3e7cf91dbf3e34e22a4c66b 241 Pfam PF00005 ABC transporter 20 166 7.1E-34 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS02955 5b94fca7e3e7cf91dbf3e34e22a4c66b 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS02955 5b94fca7e3e7cf91dbf3e34e22a4c66b 241 Gene3D G3DSA:3.40.50.300 3 234 3.7E-70 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS02955 5b94fca7e3e7cf91dbf3e34e22a4c66b 241 SUPERFAMILY SSF52540 4 236 1.13E-66 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS02955 5b94fca7e3e7cf91dbf3e34e22a4c66b 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 3 241 1.9E-120 T 09-03-2017 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 RG43_RS05845 69c5b76f0178d8567656cdf340ddb10b 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 374 2.4E-117 T 09-03-2017 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 RG43_RS05845 69c5b76f0178d8567656cdf340ddb10b 382 Gene3D G3DSA:1.20.1090.10 186 382 3.0E-72 T 09-03-2017 RG43_RS05845 69c5b76f0178d8567656cdf340ddb10b 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 09-03-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 RG43_RS05845 69c5b76f0178d8567656cdf340ddb10b 382 TIGRFAM TIGR02638 lactal_redase: lactaldehyde reductase 2 378 2.0E-200 T 09-03-2017 IPR013460 Lactaldehyde reductase KEGG: 00630+1.1.1.77|KEGG: 00640+1.1.1.77 RG43_RS05845 69c5b76f0178d8567656cdf340ddb10b 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 174 202 - T 09-03-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 RG43_RS05845 69c5b76f0178d8567656cdf340ddb10b 382 Gene3D G3DSA:3.40.50.1970 4 185 1.7E-58 T 09-03-2017 RG43_RS05845 69c5b76f0178d8567656cdf340ddb10b 382 SUPERFAMILY SSF56796 7 382 1.57E-124 T 09-03-2017 RG43_RS02750 2d10212c414dea72e3a8a92fa95b0c70 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 9.9E-179 T 09-03-2017 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 RG43_RS02750 2d10212c414dea72e3a8a92fa95b0c70 489 Pfam PF10150 Ribonuclease E/G family 124 393 7.9E-102 T 09-03-2017 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 RG43_RS02750 2d10212c414dea72e3a8a92fa95b0c70 489 Pfam PF00575 S1 RNA binding domain 38 109 1.4E-6 T 09-03-2017 IPR003029 S1 domain GO:0003676 RG43_RS02750 2d10212c414dea72e3a8a92fa95b0c70 489 SMART SM00316 37 122 1.2E-9 T 09-03-2017 IPR022967 RNA-binding domain, S1 RG43_RS02750 2d10212c414dea72e3a8a92fa95b0c70 489 Gene3D G3DSA:2.40.50.140 30 128 1.1E-33 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS02750 2d10212c414dea72e3a8a92fa95b0c70 489 SUPERFAMILY SSF50249 39 128 2.62E-19 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS13700 ad0c7bcb30f33dda8df400ed8ed1b668 271 SMART SM00342 174 256 1.0E-18 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS13700 ad0c7bcb30f33dda8df400ed8ed1b668 271 SUPERFAMILY SSF46689 215 261 6.81E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS13700 ad0c7bcb30f33dda8df400ed8ed1b668 271 Gene3D G3DSA:1.10.10.60 215 256 5.6E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS13700 ad0c7bcb30f33dda8df400ed8ed1b668 271 Pfam PF12833 Helix-turn-helix domain 180 258 1.6E-20 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS13700 ad0c7bcb30f33dda8df400ed8ed1b668 271 SUPERFAMILY SSF51182 11 215 1.09E-15 T 09-03-2017 IPR011051 RmlC-like cupin domain RG43_RS13700 ad0c7bcb30f33dda8df400ed8ed1b668 271 Pfam PF02311 AraC-like ligand binding domain 27 80 2.8E-7 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RG43_RS13700 ad0c7bcb30f33dda8df400ed8ed1b668 271 Gene3D G3DSA:1.10.10.60 153 210 2.4E-11 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS13700 ad0c7bcb30f33dda8df400ed8ed1b668 271 Gene3D G3DSA:2.60.120.10 23 86 1.6E-11 T 09-03-2017 IPR014710 RmlC-like jelly roll fold RG43_RS17150 083029cd06a45cbc035f933511547e00 753 Pfam PF00330 Aconitase family (aconitate hydratase) 41 470 4.2E-75 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS17150 083029cd06a45cbc035f933511547e00 753 SUPERFAMILY SSF52016 511 751 2.75E-34 T 09-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RG43_RS17150 083029cd06a45cbc035f933511547e00 753 Gene3D G3DSA:3.30.499.10 29 185 7.5E-32 T 09-03-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS17150 083029cd06a45cbc035f933511547e00 753 PRINTS PR00415 Aconitase family signature 297 311 5.5E-6 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS17150 083029cd06a45cbc035f933511547e00 753 PRINTS PR00415 Aconitase family signature 356 367 5.5E-6 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS17150 083029cd06a45cbc035f933511547e00 753 PRINTS PR00415 Aconitase family signature 140 153 5.5E-6 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS17150 083029cd06a45cbc035f933511547e00 753 PRINTS PR00415 Aconitase family signature 413 426 5.5E-6 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS17150 083029cd06a45cbc035f933511547e00 753 PRINTS PR00415 Aconitase family signature 216 229 5.5E-6 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS17150 083029cd06a45cbc035f933511547e00 753 Gene3D G3DSA:3.30.499.10 348 531 6.9E-35 T 09-03-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS17150 083029cd06a45cbc035f933511547e00 753 Gene3D G3DSA:3.30.499.10 301 314 6.9E-35 T 09-03-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS17150 083029cd06a45cbc035f933511547e00 753 Gene3D G3DSA:3.20.19.10 532 752 6.6E-48 T 09-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RG43_RS17150 083029cd06a45cbc035f933511547e00 753 SUPERFAMILY SSF53732 18 509 4.71E-115 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS17150 083029cd06a45cbc035f933511547e00 753 Gene3D G3DSA:3.40.1060.10 187 292 1.4E-20 T 09-03-2017 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS17150 083029cd06a45cbc035f933511547e00 753 Pfam PF00694 Aconitase C-terminal domain 636 684 3.6E-6 T 09-03-2017 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS25650 d32b2a2387fb39205c9d044690deb228 467 SUPERFAMILY SSF48295 363 466 3.66E-38 T 09-03-2017 IPR010921 Trp repressor/replication initiator GO:0043565 RG43_RS25650 d32b2a2387fb39205c9d044690deb228 467 Gene3D G3DSA:3.40.50.300 122 296 4.6E-63 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25650 d32b2a2387fb39205c9d044690deb228 467 SUPERFAMILY SSF52540 133 343 2.22E-44 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25650 d32b2a2387fb39205c9d044690deb228 467 SMART SM00382 164 366 4.3E-7 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS25650 d32b2a2387fb39205c9d044690deb228 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 425 444 1.7E-54 T 09-03-2017 IPR020591 Chromosomal replication control, initiator DnaA-like RG43_RS25650 d32b2a2387fb39205c9d044690deb228 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 197 211 1.7E-54 T 09-03-2017 IPR020591 Chromosomal replication control, initiator DnaA-like RG43_RS25650 d32b2a2387fb39205c9d044690deb228 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 263 290 1.7E-54 T 09-03-2017 IPR020591 Chromosomal replication control, initiator DnaA-like RG43_RS25650 d32b2a2387fb39205c9d044690deb228 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 229 243 1.7E-54 T 09-03-2017 IPR020591 Chromosomal replication control, initiator DnaA-like RG43_RS25650 d32b2a2387fb39205c9d044690deb228 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 165 185 1.7E-54 T 09-03-2017 IPR020591 Chromosomal replication control, initiator DnaA-like RG43_RS25650 d32b2a2387fb39205c9d044690deb228 467 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 466 34.474 T 09-03-2017 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 RG43_RS25650 d32b2a2387fb39205c9d044690deb228 467 Pfam PF11638 DnaA N-terminal domain 4 64 1.4E-19 T 09-03-2017 IPR024633 DnaA N-terminal domain RG43_RS25650 d32b2a2387fb39205c9d044690deb228 467 Pfam PF00308 Bacterial dnaA protein 133 349 3.8E-99 T 09-03-2017 IPR013317 Chromosomal replication initiator protein DnaA RG43_RS25650 d32b2a2387fb39205c9d044690deb228 467 Gene3D G3DSA:1.10.1750.10 366 466 7.3E-43 T 09-03-2017 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 RG43_RS25650 d32b2a2387fb39205c9d044690deb228 467 SMART SM00760 375 444 6.1E-45 T 09-03-2017 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 RG43_RS25650 d32b2a2387fb39205c9d044690deb228 467 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 376 444 1.1E-32 T 09-03-2017 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 RG43_RS25650 d32b2a2387fb39205c9d044690deb228 467 Gene3D G3DSA:1.10.8.60 298 365 5.6E-30 T 09-03-2017 RG43_RS25650 d32b2a2387fb39205c9d044690deb228 467 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 465 9.2E-188 T 09-03-2017 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 RG43_RS25650 d32b2a2387fb39205c9d044690deb228 467 ProSitePatterns PS01008 DnaA protein signature. 425 444 - T 09-03-2017 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 RG43_RS00210 583f887ec10bc4cddef2532fe8deb82f 276 SUPERFAMILY SSF52518 3 259 3.32E-80 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS00210 583f887ec10bc4cddef2532fe8deb82f 276 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 9 259 1.1E-46 T 09-03-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 RG43_RS00210 583f887ec10bc4cddef2532fe8deb82f 276 Gene3D G3DSA:3.40.50.970 2 264 4.4E-86 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS04150 6047fd44ebb71ac06fc95cd914b8ceac 470 Hamap MF_00915 Cell division protein FtsP [ftsP]. 1 467 58.839 T 09-03-2017 IPR026589 Cell division protein FtsP GO:0043093 RG43_RS04150 6047fd44ebb71ac06fc95cd914b8ceac 470 SUPERFAMILY SSF49503 172 310 1.39E-30 T 09-03-2017 IPR008972 Cupredoxin RG43_RS04150 6047fd44ebb71ac06fc95cd914b8ceac 470 Pfam PF07731 Multicopper oxidase 359 468 5.4E-13 T 09-03-2017 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 RG43_RS04150 6047fd44ebb71ac06fc95cd914b8ceac 470 SUPERFAMILY SSF49503 3 165 7.37E-26 T 09-03-2017 IPR008972 Cupredoxin RG43_RS04150 6047fd44ebb71ac06fc95cd914b8ceac 470 SUPERFAMILY SSF49503 314 466 2.22E-18 T 09-03-2017 IPR008972 Cupredoxin RG43_RS04150 6047fd44ebb71ac06fc95cd914b8ceac 470 Gene3D G3DSA:2.60.40.420 32 171 1.2E-21 T 09-03-2017 IPR008972 Cupredoxin RG43_RS04150 6047fd44ebb71ac06fc95cd914b8ceac 470 Pfam PF00394 Multicopper oxidase 223 287 3.6E-4 T 09-03-2017 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 RG43_RS04150 6047fd44ebb71ac06fc95cd914b8ceac 470 Gene3D G3DSA:2.60.40.420 172 288 1.3E-30 T 09-03-2017 IPR008972 Cupredoxin RG43_RS04150 6047fd44ebb71ac06fc95cd914b8ceac 470 Gene3D G3DSA:2.60.40.420 357 467 3.9E-12 T 09-03-2017 IPR008972 Cupredoxin RG43_RS04150 6047fd44ebb71ac06fc95cd914b8ceac 470 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 25 0.0015 T 09-03-2017 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RG43_RS04150 6047fd44ebb71ac06fc95cd914b8ceac 470 Pfam PF07732 Multicopper oxidase 52 166 7.6E-27 T 09-03-2017 IPR011707 Multicopper oxidase, type 3 GO:0005507 RG43_RS26525 6047fd44ebb71ac06fc95cd914b8ceac 470 Hamap MF_00915 Cell division protein FtsP [ftsP]. 1 467 58.839 T 09-03-2017 IPR026589 Cell division protein FtsP GO:0043093 RG43_RS26525 6047fd44ebb71ac06fc95cd914b8ceac 470 SUPERFAMILY SSF49503 172 310 1.39E-30 T 09-03-2017 IPR008972 Cupredoxin RG43_RS26525 6047fd44ebb71ac06fc95cd914b8ceac 470 Pfam PF07731 Multicopper oxidase 359 468 5.4E-13 T 09-03-2017 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 RG43_RS26525 6047fd44ebb71ac06fc95cd914b8ceac 470 SUPERFAMILY SSF49503 3 165 7.37E-26 T 09-03-2017 IPR008972 Cupredoxin RG43_RS26525 6047fd44ebb71ac06fc95cd914b8ceac 470 SUPERFAMILY SSF49503 314 466 2.22E-18 T 09-03-2017 IPR008972 Cupredoxin RG43_RS26525 6047fd44ebb71ac06fc95cd914b8ceac 470 Gene3D G3DSA:2.60.40.420 32 171 1.2E-21 T 09-03-2017 IPR008972 Cupredoxin RG43_RS26525 6047fd44ebb71ac06fc95cd914b8ceac 470 Pfam PF00394 Multicopper oxidase 223 287 3.6E-4 T 09-03-2017 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 RG43_RS26525 6047fd44ebb71ac06fc95cd914b8ceac 470 Gene3D G3DSA:2.60.40.420 172 288 1.3E-30 T 09-03-2017 IPR008972 Cupredoxin RG43_RS26525 6047fd44ebb71ac06fc95cd914b8ceac 470 Gene3D G3DSA:2.60.40.420 357 467 3.9E-12 T 09-03-2017 IPR008972 Cupredoxin RG43_RS26525 6047fd44ebb71ac06fc95cd914b8ceac 470 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 25 0.0015 T 09-03-2017 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RG43_RS26525 6047fd44ebb71ac06fc95cd914b8ceac 470 Pfam PF07732 Multicopper oxidase 52 166 7.6E-27 T 09-03-2017 IPR011707 Multicopper oxidase, type 3 GO:0005507 RG43_RS02840 10af40fd844aae6983231680e7355af9 165 Pfam PF04386 Stringent starvation protein B 9 165 1.1E-45 T 09-03-2017 IPR007481 Stringent starvation protein B RG43_RS02840 10af40fd844aae6983231680e7355af9 165 Gene3D G3DSA:2.30.30.220 4 111 1.5E-52 T 09-03-2017 IPR007481 Stringent starvation protein B RG43_RS02840 10af40fd844aae6983231680e7355af9 165 PIRSF PIRSF005276 3 165 1.2E-61 T 09-03-2017 IPR007481 Stringent starvation protein B RG43_RS02840 10af40fd844aae6983231680e7355af9 165 SUPERFAMILY SSF101738 4 119 7.46E-49 T 09-03-2017 IPR007481 Stringent starvation protein B RG43_RS02360 af999efcbd0a2375432bf21906bd585c 201 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 13 198 5.6E-75 T 09-03-2017 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS02360 af999efcbd0a2375432bf21906bd585c 201 Pfam PF00573 Ribosomal protein L4/L1 family 13 198 3.0E-64 T 09-03-2017 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 RG43_RS02360 af999efcbd0a2375432bf21906bd585c 201 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 201 33.976 T 09-03-2017 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS02360 af999efcbd0a2375432bf21906bd585c 201 SUPERFAMILY SSF52166 10 200 7.06E-73 T 09-03-2017 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 RG43_RS02360 af999efcbd0a2375432bf21906bd585c 201 Gene3D G3DSA:3.40.1370.10 54 201 2.5E-59 T 09-03-2017 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 RG43_RS04720 6265739ee390889f2a6f496563cb1310 123 Gene3D G3DSA:1.10.10.60 66 118 2.2E-21 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS04720 6265739ee390889f2a6f496563cb1310 123 SUPERFAMILY SSF46689 65 116 6.0E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS04720 6265739ee390889f2a6f496563cb1310 123 Gene3D G3DSA:1.10.10.60 12 65 2.4E-20 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS04720 6265739ee390889f2a6f496563cb1310 123 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 63 108 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RG43_RS04720 6265739ee390889f2a6f496563cb1310 123 Pfam PF12833 Helix-turn-helix domain 35 114 1.1E-21 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS04720 6265739ee390889f2a6f496563cb1310 123 SMART SM00342 29 112 2.6E-31 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS04720 6265739ee390889f2a6f496563cb1310 123 SUPERFAMILY SSF46689 13 63 2.75E-11 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS04720 6265739ee390889f2a6f496563cb1310 123 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 81 96 9.6E-5 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RG43_RS04720 6265739ee390889f2a6f496563cb1310 123 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 96 112 9.6E-5 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RG43_RS07935 4fe172b86d74f0013249d879d1bc81b9 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 6.3E-21 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS07935 4fe172b86d74f0013249d879d1bc81b9 331 Gene3D G3DSA:1.10.260.40 1 50 2.1E-23 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS07935 4fe172b86d74f0013249d879d1bc81b9 331 Gene3D G3DSA:3.40.50.2300 51 168 9.8E-19 T 09-03-2017 RG43_RS07935 4fe172b86d74f0013249d879d1bc81b9 331 SUPERFAMILY SSF47413 1 56 6.88E-17 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS07935 4fe172b86d74f0013249d879d1bc81b9 331 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 9.2E-5 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS07935 4fe172b86d74f0013249d879d1bc81b9 331 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 9.2E-5 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS07935 4fe172b86d74f0013249d879d1bc81b9 331 SMART SM00354 1 73 3.7E-28 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS07935 4fe172b86d74f0013249d879d1bc81b9 331 Gene3D G3DSA:3.40.50.2300 169 331 1.1E-33 T 09-03-2017 RG43_RS07935 4fe172b86d74f0013249d879d1bc81b9 331 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 09-03-2017 RG43_RS07935 4fe172b86d74f0013249d879d1bc81b9 331 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 61 329 9.9E-91 T 09-03-2017 IPR001761 Periplasmic binding protein/LacI sugar binding domain RG43_RS07935 4fe172b86d74f0013249d879d1bc81b9 331 SUPERFAMILY SSF53822 65 331 1.81E-38 T 09-03-2017 IPR028082 Periplasmic binding protein-like I RG43_RS04275 9cc3236bfa628299a63b3cc724ffa37d 113 PIRSF PIRSF004761 1 113 2.5E-36 T 09-03-2017 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 RG43_RS04275 9cc3236bfa628299a63b3cc724ffa37d 113 Hamap MF_00213 Probable hydrogenase nickel incorporation protein HypA [hypA]. 1 113 24.126 T 09-03-2017 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 RG43_RS04275 9cc3236bfa628299a63b3cc724ffa37d 113 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 113 2.8E-44 T 09-03-2017 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 RG43_RS04275 9cc3236bfa628299a63b3cc724ffa37d 113 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 112 2.4E-31 T 09-03-2017 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 RG43_RS04275 9cc3236bfa628299a63b3cc724ffa37d 113 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 34 76 - T 09-03-2017 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site RG43_RS26650 9cc3236bfa628299a63b3cc724ffa37d 113 PIRSF PIRSF004761 1 113 2.5E-36 T 09-03-2017 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 RG43_RS26650 9cc3236bfa628299a63b3cc724ffa37d 113 Hamap MF_00213 Probable hydrogenase nickel incorporation protein HypA [hypA]. 1 113 24.126 T 09-03-2017 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 RG43_RS26650 9cc3236bfa628299a63b3cc724ffa37d 113 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 113 2.8E-44 T 09-03-2017 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 RG43_RS26650 9cc3236bfa628299a63b3cc724ffa37d 113 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 112 2.4E-31 T 09-03-2017 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 RG43_RS26650 9cc3236bfa628299a63b3cc724ffa37d 113 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 34 76 - T 09-03-2017 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site RG43_RS15980 3c613cad0e6152bbcccc71ae2e7b1dae 440 Pfam PF03882 MukF winged-helix domain 3 117 8.1E-58 T 09-03-2017 IPR033439 Chromosome partition protein MukF, winged-helix domain RG43_RS15980 3c613cad0e6152bbcccc71ae2e7b1dae 440 PIRSF PIRSF018282 1 440 3.5E-245 T 09-03-2017 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 RG43_RS15980 3c613cad0e6152bbcccc71ae2e7b1dae 440 Pfam PF17193 MukF C-terminal domain 283 440 5.0E-81 T 09-03-2017 IPR033441 Chromosome partition protein MukF, C-terminal domain RG43_RS15980 3c613cad0e6152bbcccc71ae2e7b1dae 440 Pfam PF17192 MukF middle domain 121 281 4.4E-85 T 09-03-2017 IPR033440 Chromosome partition protein MukF, middle domain RG43_RS15980 3c613cad0e6152bbcccc71ae2e7b1dae 440 Gene3D G3DSA:1.10.10.10 24 118 4.7E-49 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS15980 3c613cad0e6152bbcccc71ae2e7b1dae 440 SUPERFAMILY SSF140570 119 281 1.23E-77 T 09-03-2017 IPR033440 Chromosome partition protein MukF, middle domain RG43_RS15980 3c613cad0e6152bbcccc71ae2e7b1dae 440 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 1 440 57.981 T 09-03-2017 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 RG43_RS15980 3c613cad0e6152bbcccc71ae2e7b1dae 440 SUPERFAMILY SSF46785 8 118 1.83E-48 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS03030 3a22854b60f2d397294992484f1a8b31 103 SUPERFAMILY SSF141091 1 102 4.45E-37 T 09-03-2017 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS03030 3a22854b60f2d397294992484f1a8b31 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 09-03-2017 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS03030 3a22854b60f2d397294992484f1a8b31 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 26.783 T 09-03-2017 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS03030 3a22854b60f2d397294992484f1a8b31 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 1.1E-37 T 09-03-2017 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS03030 3a22854b60f2d397294992484f1a8b31 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 3.3E-45 T 09-03-2017 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS15605 f6a601291f79a9ef2065e8d045f6ce95 154 Pfam PF00486 Transcriptional regulatory protein, C terminal 77 149 4.6E-17 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RG43_RS15605 f6a601291f79a9ef2065e8d045f6ce95 154 Gene3D G3DSA:1.10.10.10 53 151 9.2E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS15605 f6a601291f79a9ef2065e8d045f6ce95 154 SMART SM00862 77 149 4.8E-18 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RG43_RS15605 f6a601291f79a9ef2065e8d045f6ce95 154 SUPERFAMILY SSF46894 52 150 5.39E-22 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RG43_RS15605 f6a601291f79a9ef2065e8d045f6ce95 154 SUPERFAMILY SSF52172 1 43 8.94E-12 T 09-03-2017 IPR011006 CheY-like superfamily RG43_RS15605 f6a601291f79a9ef2065e8d045f6ce95 154 Gene3D G3DSA:3.40.50.2300 1 50 2.7E-9 T 09-03-2017 RG43_RS02670 b4444db13d93a430c75b1f22d9459e45 321 Gene3D G3DSA:3.20.20.70 7 244 7.4E-82 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS02670 b4444db13d93a430c75b1f22d9459e45 321 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 09-03-2017 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 RG43_RS02670 b4444db13d93a430c75b1f22d9459e45 321 PIRSF PIRSF006621 1 321 1.6E-99 T 09-03-2017 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RG43_RS02670 b4444db13d93a430c75b1f22d9459e45 321 Pfam PF01207 Dihydrouridine synthase (Dus) 14 318 6.5E-117 T 09-03-2017 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RG43_RS02670 b4444db13d93a430c75b1f22d9459e45 321 SUPERFAMILY SSF51395 10 319 1.83E-87 T 09-03-2017 RG43_RS02670 b4444db13d93a430c75b1f22d9459e45 321 Gene3D G3DSA:1.10.1200.80 252 319 2.6E-17 T 09-03-2017 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 RG43_RS02670 b4444db13d93a430c75b1f22d9459e45 321 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 320 5.2E-143 T 09-03-2017 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 RG43_RS02670 b4444db13d93a430c75b1f22d9459e45 321 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 49.407 T 09-03-2017 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 RG43_RS11610 5de7faaf805c3c09c17b73b5f74e9eca 231 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 219 2.7E-68 T 09-03-2017 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 RG43_RS11610 5de7faaf805c3c09c17b73b5f74e9eca 231 Pfam PF00814 Glycoprotease family 28 132 5.7E-28 T 09-03-2017 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RG43_RS11610 5de7faaf805c3c09c17b73b5f74e9eca 231 SUPERFAMILY SSF53067 108 217 6.34E-31 T 09-03-2017 RG43_RS11610 5de7faaf805c3c09c17b73b5f74e9eca 231 SUPERFAMILY SSF53067 3 106 1.04E-30 T 09-03-2017 RG43_RS11610 5de7faaf805c3c09c17b73b5f74e9eca 231 Gene3D G3DSA:3.30.420.40 1 133 1.2E-45 T 09-03-2017 RG43_RS06270 dd559621c1817a22cf6885c1285fa55a 307 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 38 53 - T 09-03-2017 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS06270 dd559621c1817a22cf6885c1285fa55a 307 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 194 207 - T 09-03-2017 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS06270 dd559621c1817a22cf6885c1285fa55a 307 Pfam PF00146 NADH dehydrogenase 9 302 6.1E-49 T 09-03-2017 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS21695 6a1b4ff310a2ced6b079936d8f4a7dcd 259 Gene3D G3DSA:3.20.20.140 4 258 1.4E-79 T 09-03-2017 RG43_RS21695 6a1b4ff310a2ced6b079936d8f4a7dcd 259 SUPERFAMILY SSF51556 5 258 9.15E-78 T 09-03-2017 IPR032466 Metal-dependent hydrolase RG43_RS21695 6a1b4ff310a2ced6b079936d8f4a7dcd 259 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 5 13 - T 09-03-2017 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 RG43_RS21695 6a1b4ff310a2ced6b079936d8f4a7dcd 259 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 129 139 - T 09-03-2017 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 RG43_RS21695 6a1b4ff310a2ced6b079936d8f4a7dcd 259 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 193 209 - T 09-03-2017 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 RG43_RS21695 6a1b4ff310a2ced6b079936d8f4a7dcd 259 Pfam PF01026 TatD related DNase 6 257 6.7E-68 T 09-03-2017 IPR001130 TatD family GO:0016788 RG43_RS21695 6a1b4ff310a2ced6b079936d8f4a7dcd 259 PIRSF PIRSF005902 2 259 1.5E-73 T 09-03-2017 IPR001130 TatD family GO:0016788 RG43_RS10300 6305aaba76e728bf5c46b861d9656571 248 Gene3D G3DSA:3.40.50.300 52 224 2.7E-28 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS10300 6305aaba76e728bf5c46b861d9656571 248 PIRSF PIRSF003073 2 248 6.2E-49 T 09-03-2017 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein RG43_RS10300 6305aaba76e728bf5c46b861d9656571 248 SUPERFAMILY SSF52540 67 230 2.13E-18 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS10300 6305aaba76e728bf5c46b861d9656571 248 Pfam PF01695 IstB-like ATP binding protein 75 219 1.6E-19 T 09-03-2017 IPR002611 IstB-like ATP-binding protein GO:0005524 RG43_RS01780 e4861bcbcf5d57a4dfe2da07c225dc86 266 SUPERFAMILY SSF49354 30 166 8.24E-35 T 09-03-2017 IPR008962 PapD-like RG43_RS01780 e4861bcbcf5d57a4dfe2da07c225dc86 266 PRINTS PR00969 Pili chaperone signature 120 137 1.2E-16 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS01780 e4861bcbcf5d57a4dfe2da07c225dc86 266 PRINTS PR00969 Pili chaperone signature 36 45 1.2E-16 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS01780 e4861bcbcf5d57a4dfe2da07c225dc86 266 PRINTS PR00969 Pili chaperone signature 183 198 1.2E-16 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS01780 e4861bcbcf5d57a4dfe2da07c225dc86 266 PRINTS PR00969 Pili chaperone signature 148 163 1.2E-16 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS01780 e4861bcbcf5d57a4dfe2da07c225dc86 266 SUPERFAMILY SSF49584 160 245 9.94E-19 T 09-03-2017 IPR016148 Pili assembly chaperone, C-terminal RG43_RS01780 e4861bcbcf5d57a4dfe2da07c225dc86 266 Gene3D G3DSA:2.60.40.360 35 166 1.7E-35 T 09-03-2017 IPR008962 PapD-like RG43_RS01780 e4861bcbcf5d57a4dfe2da07c225dc86 266 Gene3D G3DSA:2.60.40.1070 169 238 2.2E-17 T 09-03-2017 IPR016148 Pili assembly chaperone, C-terminal RG43_RS01780 e4861bcbcf5d57a4dfe2da07c225dc86 266 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 35 166 2.6E-31 T 09-03-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 RG43_RS06290 9d393cdc9cd399d2d2d27a439423cc62 136 ProDom PD021295 MATURATION HYDROGENLYASE FORMATE HYCH LYASE HYCE PROCESSING OXIDOREDUCTASE J COMPONENT 1 134 4.0E-76 T 09-03-2017 IPR010005 Formate hydrogenlyase maturation HycH RG43_RS06290 9d393cdc9cd399d2d2d27a439423cc62 136 Pfam PF07450 Formate hydrogenlyase maturation protein HycH 4 133 1.3E-55 T 09-03-2017 IPR010005 Formate hydrogenlyase maturation HycH RG43_RS22150 ebd46305b825ee934c2340d3d0707d31 360 Pfam PF03739 Predicted permease YjgP/YjgQ family 9 358 2.5E-72 T 09-03-2017 IPR005495 Permease LptG/LptF-related GO:0016021 RG43_RS22150 ebd46305b825ee934c2340d3d0707d31 360 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 6 358 1.5E-137 T 09-03-2017 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 RG43_RS22035 691ac360b9738856c61bf49cf9e7b869 300 SUPERFAMILY SSF49401 181 300 2.09E-27 T 09-03-2017 IPR008966 Adhesion domain RG43_RS22035 691ac360b9738856c61bf49cf9e7b869 300 Pfam PF00419 Fimbrial protein 173 300 1.3E-10 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS22035 691ac360b9738856c61bf49cf9e7b869 300 SUPERFAMILY SSF49401 22 179 2.73E-70 T 09-03-2017 IPR008966 Adhesion domain RG43_RS22035 691ac360b9738856c61bf49cf9e7b869 300 Pfam PF09160 FimH, mannose binding 24 168 5.1E-62 T 09-03-2017 IPR015243 FimH, mannose-binding domain RG43_RS22035 691ac360b9738856c61bf49cf9e7b869 300 Gene3D G3DSA:2.60.40.1090 22 179 2.1E-83 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS22035 691ac360b9738856c61bf49cf9e7b869 300 Gene3D G3DSA:2.60.40.1090 180 300 6.0E-36 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS25870 9a40c7c310c32479bf5d6ca6d7b8ca63 272 SUPERFAMILY SSF53850 34 272 6.6E-76 T 09-03-2017 RG43_RS25870 9a40c7c310c32479bf5d6ca6d7b8ca63 272 Gene3D G3DSA:3.40.190.10 31 162 1.7E-54 T 09-03-2017 RG43_RS25870 9a40c7c310c32479bf5d6ca6d7b8ca63 272 PIRSF PIRSF002854 1 272 2.3E-95 T 09-03-2017 IPR004872 Lipoprotein NlpA family RG43_RS25870 9a40c7c310c32479bf5d6ca6d7b8ca63 272 Pfam PF03180 NLPA lipoprotein 34 272 1.1E-92 T 09-03-2017 IPR004872 Lipoprotein NlpA family RG43_RS25870 9a40c7c310c32479bf5d6ca6d7b8ca63 272 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 15 272 1.6E-149 T 09-03-2017 IPR004872 Lipoprotein NlpA family RG43_RS09110 0fce27d4f1889da18e5823320779c3b7 316 Gene3D G3DSA:3.20.20.70 2 240 2.5E-63 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS09110 0fce27d4f1889da18e5823320779c3b7 316 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 09-03-2017 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 RG43_RS09110 0fce27d4f1889da18e5823320779c3b7 316 SUPERFAMILY SSF51395 1 302 8.61E-71 T 09-03-2017 RG43_RS09110 0fce27d4f1889da18e5823320779c3b7 316 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 52.002 T 09-03-2017 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 RG43_RS09110 0fce27d4f1889da18e5823320779c3b7 316 PIRSF PIRSF006621 1 315 2.5E-83 T 09-03-2017 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RG43_RS09110 0fce27d4f1889da18e5823320779c3b7 316 Pfam PF01207 Dihydrouridine synthase (Dus) 5 306 3.8E-96 T 09-03-2017 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RG43_RS03060 6430a14f5b78b1e75288bbc6f448e0c5 97 Gene3D G3DSA:3.30.110.60 1 94 3.2E-34 T 09-03-2017 IPR001890 RNA-binding, CRM domain GO:0003723 RG43_RS03060 6430a14f5b78b1e75288bbc6f448e0c5 97 SUPERFAMILY SSF75471 1 95 5.89E-31 T 09-03-2017 IPR001890 RNA-binding, CRM domain GO:0003723 RG43_RS03060 6430a14f5b78b1e75288bbc6f448e0c5 97 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 97 7.6E-44 T 09-03-2017 IPR017924 RNA-binding protein YhbY GO:0003723 RG43_RS03060 6430a14f5b78b1e75288bbc6f448e0c5 97 SMART SM01103 3 86 4.3E-40 T 09-03-2017 IPR001890 RNA-binding, CRM domain GO:0003723 RG43_RS03060 6430a14f5b78b1e75288bbc6f448e0c5 97 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 1.7E-22 T 09-03-2017 IPR001890 RNA-binding, CRM domain GO:0003723 RG43_RS03060 6430a14f5b78b1e75288bbc6f448e0c5 97 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 97 2.0E-44 T 09-03-2017 IPR001890 RNA-binding, CRM domain GO:0003723 RG43_RS11450 7fc5cd2aed6ca165bc4599c23d40d821 682 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 240 320 6.0E-15 T 09-03-2017 IPR001478 PDZ domain GO:0005515 RG43_RS11450 7fc5cd2aed6ca165bc4599c23d40d821 682 Gene3D G3DSA:2.30.42.10 252 334 6.2E-23 T 09-03-2017 IPR001478 PDZ domain GO:0005515 RG43_RS11450 7fc5cd2aed6ca165bc4599c23d40d821 682 SUPERFAMILY SSF50156 219 345 6.03E-16 T 09-03-2017 IPR001478 PDZ domain GO:0005515 RG43_RS11450 7fc5cd2aed6ca165bc4599c23d40d821 682 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 536 667 3.7E-40 T 09-03-2017 IPR020992 Tail specific protease, C-terminal RG43_RS11450 7fc5cd2aed6ca165bc4599c23d40d821 682 SMART SM00245 326 531 5.2E-82 T 09-03-2017 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 RG43_RS11450 7fc5cd2aed6ca165bc4599c23d40d821 682 SMART SM00228 246 323 1.1E-9 T 09-03-2017 IPR001478 PDZ domain GO:0005515 RG43_RS11450 7fc5cd2aed6ca165bc4599c23d40d821 682 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 194 551 6.2E-131 T 09-03-2017 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 RG43_RS11450 7fc5cd2aed6ca165bc4599c23d40d821 682 Gene3D G3DSA:3.30.750.44 199 251 7.3E-4 T 09-03-2017 RG43_RS11450 7fc5cd2aed6ca165bc4599c23d40d821 682 Pfam PF03572 Peptidase family S41 356 529 1.8E-53 T 09-03-2017 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 RG43_RS11450 7fc5cd2aed6ca165bc4599c23d40d821 682 Gene3D G3DSA:3.90.226.10 335 533 8.8E-68 T 09-03-2017 IPR029045 ClpP/crotonase-like domain RG43_RS11450 7fc5cd2aed6ca165bc4599c23d40d821 682 Gene3D G3DSA:3.90.226.10 646 675 8.8E-68 T 09-03-2017 IPR029045 ClpP/crotonase-like domain RG43_RS11450 7fc5cd2aed6ca165bc4599c23d40d821 682 SUPERFAMILY SSF52096 194 264 1.47E-68 T 09-03-2017 IPR029045 ClpP/crotonase-like domain RG43_RS11450 7fc5cd2aed6ca165bc4599c23d40d821 682 SUPERFAMILY SSF52096 350 537 1.47E-68 T 09-03-2017 IPR029045 ClpP/crotonase-like domain RG43_RS15360 69322bc3b27a5eeab049bf1fd120170d 110 Pfam PF10610 Thin aggregative fimbriae synthesis protein 6 103 3.4E-50 T 09-03-2017 IPR014491 Curli production protein CsgC RG43_RS15360 69322bc3b27a5eeab049bf1fd120170d 110 PIRSF PIRSF018100 1 110 1.7E-70 T 09-03-2017 IPR014491 Curli production protein CsgC RG43_RS12980 d62255bc9886a0e4110001b322254db1 577 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 490 520 7.8E-5 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat RG43_RS12980 d62255bc9886a0e4110001b322254db1 577 SUPERFAMILY SSF51126 246 576 1.13E-10 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor RG43_RS12980 d62255bc9886a0e4110001b322254db1 577 Gene3D G3DSA:2.160.20.20 337 577 3.3E-10 T 09-03-2017 IPR012332 P22 tailspike C-terminal domain-like RG43_RS25285 1d3a670d1bfad1175025fba33bbc4a4c 309 Gene3D G3DSA:3.30.470.10 7 130 1.6E-43 T 09-03-2017 RG43_RS25285 1d3a670d1bfad1175025fba33bbc4a4c 309 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 223 - T 09-03-2017 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: R-HSA-70895 RG43_RS25285 1d3a670d1bfad1175025fba33bbc4a4c 309 Gene3D G3DSA:3.20.10.10 135 295 3.0E-58 T 09-03-2017 RG43_RS25285 1d3a670d1bfad1175025fba33bbc4a4c 309 Pfam PF01063 Amino-transferase class IV 36 268 6.0E-51 T 09-03-2017 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 RG43_RS25285 1d3a670d1bfad1175025fba33bbc4a4c 309 SUPERFAMILY SSF56752 7 308 1.31E-105 T 09-03-2017 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 RG43_RS25285 1d3a670d1bfad1175025fba33bbc4a4c 309 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 10 307 6.9E-148 T 09-03-2017 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108 RG43_RS03240 5ed3927f50eb66cd4a6e0e2b27f285ad 678 Pfam PF04348 LppC putative lipoprotein 346 672 1.8E-86 T 09-03-2017 IPR007443 Penicillin-binding protein activator LpoA RG43_RS03240 5ed3927f50eb66cd4a6e0e2b27f285ad 678 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 1 672 36.539 T 09-03-2017 IPR007443 Penicillin-binding protein activator LpoA RG43_RS03240 5ed3927f50eb66cd4a6e0e2b27f285ad 678 Gene3D G3DSA:1.25.40.10 69 141 2.3E-5 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS03240 5ed3927f50eb66cd4a6e0e2b27f285ad 678 SUPERFAMILY SSF48435 50 150 1.1E-5 T 09-03-2017 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 RG43_RS03240 5ed3927f50eb66cd4a6e0e2b27f285ad 678 Gene3D G3DSA:3.40.50.2300 525 600 2.1E-55 T 09-03-2017 RG43_RS03240 5ed3927f50eb66cd4a6e0e2b27f285ad 678 Gene3D G3DSA:3.40.50.2300 425 485 2.1E-55 T 09-03-2017 RG43_RS03240 5ed3927f50eb66cd4a6e0e2b27f285ad 678 Gene3D G3DSA:3.40.50.2300 256 289 1.4E-75 T 09-03-2017 RG43_RS03240 5ed3927f50eb66cd4a6e0e2b27f285ad 678 Gene3D G3DSA:3.40.50.2300 354 424 1.4E-75 T 09-03-2017 RG43_RS03240 5ed3927f50eb66cd4a6e0e2b27f285ad 678 Gene3D G3DSA:3.40.50.2300 601 665 1.4E-75 T 09-03-2017 RG43_RS03240 5ed3927f50eb66cd4a6e0e2b27f285ad 678 SUPERFAMILY SSF53822 258 287 8.83E-72 T 09-03-2017 IPR028082 Periplasmic binding protein-like I RG43_RS03240 5ed3927f50eb66cd4a6e0e2b27f285ad 678 SUPERFAMILY SSF53822 523 676 8.83E-72 T 09-03-2017 IPR028082 Periplasmic binding protein-like I RG43_RS03240 5ed3927f50eb66cd4a6e0e2b27f285ad 678 SUPERFAMILY SSF53822 352 484 8.83E-72 T 09-03-2017 IPR028082 Periplasmic binding protein-like I RG43_RS06260 b2deb51c0c12736ef6d5f1a686abcb82 203 Gene3D G3DSA:3.30.70.20 56 86 1.7E-13 T 09-03-2017 RG43_RS06260 b2deb51c0c12736ef6d5f1a686abcb82 203 Pfam PF13247 4Fe-4S dicluster domain 47 97 5.2E-7 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS06260 b2deb51c0c12736ef6d5f1a686abcb82 203 Gene3D G3DSA:3.30.70.20 87 155 1.0E-9 T 09-03-2017 RG43_RS06260 b2deb51c0c12736ef6d5f1a686abcb82 203 SUPERFAMILY SSF54862 136 182 7.33E-41 T 09-03-2017 RG43_RS06260 b2deb51c0c12736ef6d5f1a686abcb82 203 SUPERFAMILY SSF54862 2 101 7.33E-41 T 09-03-2017 RG43_RS06260 b2deb51c0c12736ef6d5f1a686abcb82 203 Gene3D G3DSA:3.30.70.20 156 189 3.4E-22 T 09-03-2017 RG43_RS06260 b2deb51c0c12736ef6d5f1a686abcb82 203 Gene3D G3DSA:3.30.70.20 5 55 3.4E-22 T 09-03-2017 RG43_RS06260 b2deb51c0c12736ef6d5f1a686abcb82 203 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 82 93 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS17605 a4013c9d32484a39cdebc53885e63d5f 682 Gene3D G3DSA:2.70.150.10 49 208 3.5E-23 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 RG43_RS17605 a4013c9d32484a39cdebc53885e63d5f 682 Gene3D G3DSA:3.40.50.1000 444 563 4.4E-35 T 09-03-2017 IPR023214 HAD-like domain RG43_RS17605 a4013c9d32484a39cdebc53885e63d5f 682 Pfam PF00122 E1-E2 ATPase 72 296 3.6E-41 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 RG43_RS17605 a4013c9d32484a39cdebc53885e63d5f 682 SUPERFAMILY SSF56784 293 317 6.45E-39 T 09-03-2017 IPR023214 HAD-like domain RG43_RS17605 a4013c9d32484a39cdebc53885e63d5f 682 SUPERFAMILY SSF56784 377 404 6.45E-39 T 09-03-2017 IPR023214 HAD-like domain RG43_RS17605 a4013c9d32484a39cdebc53885e63d5f 682 SUPERFAMILY SSF56784 435 559 6.45E-39 T 09-03-2017 IPR023214 HAD-like domain RG43_RS17605 a4013c9d32484a39cdebc53885e63d5f 682 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 2 677 0.0 T 09-03-2017 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 RG43_RS17605 a4013c9d32484a39cdebc53885e63d5f 682 SUPERFAMILY SSF81665 619 660 2.48E-12 T 09-03-2017 RG43_RS17605 a4013c9d32484a39cdebc53885e63d5f 682 SUPERFAMILY SSF81665 29 103 2.48E-12 T 09-03-2017 RG43_RS17605 a4013c9d32484a39cdebc53885e63d5f 682 SUPERFAMILY SSF81665 208 299 2.48E-12 T 09-03-2017 RG43_RS17605 a4013c9d32484a39cdebc53885e63d5f 682 Gene3D G3DSA:3.40.1110.10 316 443 1.6E-55 T 09-03-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 RG43_RS17605 a4013c9d32484a39cdebc53885e63d5f 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 154 168 3.7E-24 T 09-03-2017 RG43_RS17605 a4013c9d32484a39cdebc53885e63d5f 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 539 551 3.7E-24 T 09-03-2017 RG43_RS17605 a4013c9d32484a39cdebc53885e63d5f 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 463 473 3.7E-24 T 09-03-2017 RG43_RS17605 a4013c9d32484a39cdebc53885e63d5f 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 305 319 3.7E-24 T 09-03-2017 RG43_RS17605 a4013c9d32484a39cdebc53885e63d5f 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 516 535 3.7E-24 T 09-03-2017 RG43_RS17605 a4013c9d32484a39cdebc53885e63d5f 682 SUPERFAMILY SSF81653 120 207 1.44E-20 T 09-03-2017 RG43_RS17605 a4013c9d32484a39cdebc53885e63d5f 682 Pfam PF00702 haloacid dehalogenase-like hydrolase 301 530 7.1E-38 T 09-03-2017 RG43_RS17605 a4013c9d32484a39cdebc53885e63d5f 682 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 72 337 9.0E-38 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 RG43_RS17605 a4013c9d32484a39cdebc53885e63d5f 682 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 372 604 4.2E-49 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 RG43_RS17605 a4013c9d32484a39cdebc53885e63d5f 682 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 307 313 - T 09-03-2017 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 RG43_RS17605 a4013c9d32484a39cdebc53885e63d5f 682 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 8 680 41.512 T 09-03-2017 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 RG43_RS17605 a4013c9d32484a39cdebc53885e63d5f 682 SUPERFAMILY SSF81660 316 450 4.25E-38 T 09-03-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 RG43_RS26470 3b750d895120476802ff0fed4854067d 295 Pfam PF01380 SIS domain 137 246 2.5E-13 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 RG43_RS26470 3b750d895120476802ff0fed4854067d 295 Gene3D G3DSA:1.10.10.10 14 84 3.6E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS26470 3b750d895120476802ff0fed4854067d 295 Pfam PF01418 Helix-turn-helix domain, rpiR family 16 81 3.7E-9 T 09-03-2017 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 RG43_RS26470 3b750d895120476802ff0fed4854067d 295 Gene3D G3DSA:3.40.50.10490 108 266 9.3E-25 T 09-03-2017 RG43_RS26470 3b750d895120476802ff0fed4854067d 295 SUPERFAMILY SSF53697 127 268 4.67E-24 T 09-03-2017 RG43_RS26470 3b750d895120476802ff0fed4854067d 295 SUPERFAMILY SSF46689 14 84 1.65E-14 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS04095 3b750d895120476802ff0fed4854067d 295 Pfam PF01380 SIS domain 137 246 2.5E-13 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 RG43_RS04095 3b750d895120476802ff0fed4854067d 295 Gene3D G3DSA:1.10.10.10 14 84 3.6E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS04095 3b750d895120476802ff0fed4854067d 295 Pfam PF01418 Helix-turn-helix domain, rpiR family 16 81 3.7E-9 T 09-03-2017 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 RG43_RS04095 3b750d895120476802ff0fed4854067d 295 Gene3D G3DSA:3.40.50.10490 108 266 9.3E-25 T 09-03-2017 RG43_RS04095 3b750d895120476802ff0fed4854067d 295 SUPERFAMILY SSF53697 127 268 4.67E-24 T 09-03-2017 RG43_RS04095 3b750d895120476802ff0fed4854067d 295 SUPERFAMILY SSF46689 14 84 1.65E-14 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS20445 a883a058ed9160569ff9f9f431d5a057 266 Gene3D G3DSA:3.60.10.10 39 233 5.7E-7 T 09-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase RG43_RS20445 a883a058ed9160569ff9f9f431d5a057 266 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 49 252 3.4E-9 T 09-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase RG43_RS20445 a883a058ed9160569ff9f9f431d5a057 266 Hamap MF_01119 UPF0294 protein YafD [yafD]. 1 260 54.24 T 09-03-2017 IPR022958 Uncharacterised protein family UPF0294 RG43_RS20445 a883a058ed9160569ff9f9f431d5a057 266 SUPERFAMILY SSF56219 44 260 1.96E-26 T 09-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase RG43_RS25010 7dd21fe7171c9e259c7ece19b5ba22f4 155 Pfam PF03061 Thioesterase superfamily 57 145 4.5E-19 T 09-03-2017 IPR006683 Thioesterase domain Reactome: R-HSA-75105 RG43_RS25010 7dd21fe7171c9e259c7ece19b5ba22f4 155 Gene3D G3DSA:3.10.129.10 17 154 7.0E-31 T 09-03-2017 IPR029069 HotDog domain RG43_RS25010 7dd21fe7171c9e259c7ece19b5ba22f4 155 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 25 153 5.2E-15 T 09-03-2017 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-75105 RG43_RS25010 7dd21fe7171c9e259c7ece19b5ba22f4 155 SUPERFAMILY SSF54637 12 154 1.1E-25 T 09-03-2017 IPR029069 HotDog domain RG43_RS26665 0f543de80dfadb95cfd0fd65a77f0def 619 SUPERFAMILY SSF56059 497 614 2.51E-77 T 09-03-2017 RG43_RS26665 0f543de80dfadb95cfd0fd65a77f0def 619 SUPERFAMILY SSF56059 205 379 2.51E-77 T 09-03-2017 RG43_RS26665 0f543de80dfadb95cfd0fd65a77f0def 619 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 250 615 1.0E-66 T 09-03-2017 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain RG43_RS26665 0f543de80dfadb95cfd0fd65a77f0def 619 SUPERFAMILY SSF52440 380 510 2.65E-39 T 09-03-2017 IPR016185 Pre-ATP-grasp domain RG43_RS26665 0f543de80dfadb95cfd0fd65a77f0def 619 Pfam PF05257 CHAP domain 52 149 1.2E-11 T 09-03-2017 IPR007921 CHAP domain RG43_RS26665 0f543de80dfadb95cfd0fd65a77f0def 619 SUPERFAMILY SSF54001 10 197 2.65E-61 T 09-03-2017 RG43_RS04290 0f543de80dfadb95cfd0fd65a77f0def 619 SUPERFAMILY SSF56059 497 614 2.51E-77 T 09-03-2017 RG43_RS04290 0f543de80dfadb95cfd0fd65a77f0def 619 SUPERFAMILY SSF56059 205 379 2.51E-77 T 09-03-2017 RG43_RS04290 0f543de80dfadb95cfd0fd65a77f0def 619 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 250 615 1.0E-66 T 09-03-2017 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain RG43_RS04290 0f543de80dfadb95cfd0fd65a77f0def 619 SUPERFAMILY SSF52440 380 510 2.65E-39 T 09-03-2017 IPR016185 Pre-ATP-grasp domain RG43_RS04290 0f543de80dfadb95cfd0fd65a77f0def 619 Pfam PF05257 CHAP domain 52 149 1.2E-11 T 09-03-2017 IPR007921 CHAP domain RG43_RS04290 0f543de80dfadb95cfd0fd65a77f0def 619 SUPERFAMILY SSF54001 10 197 2.65E-61 T 09-03-2017 RG43_RS05670 3de77f0a847c55ec7f1582ea857f5c14 359 Pfam PF06996 Type VI secretion, VasB, ImpH, VC_A0111 21 318 1.7E-75 T 09-03-2017 IPR010732 Type VI secretion, TssG-like RG43_RS05670 3de77f0a847c55ec7f1582ea857f5c14 359 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 20 318 5.3E-78 T 09-03-2017 IPR010732 Type VI secretion, TssG-like RG43_RS06160 fa2f867c0feac7d4809209f220f2fef0 475 Gene3D G3DSA:3.40.1670.10 326 440 1.7E-33 T 09-03-2017 RG43_RS06160 fa2f867c0feac7d4809209f220f2fef0 475 Hamap MF_01985 Phenolic acid decarboxylase subunit C. 1 472 70.672 T 09-03-2017 IPR032902 Phenolic acid decarboxylase subunit C GO:0016831 KEGG: 00627+4.1.1.61 RG43_RS06160 fa2f867c0feac7d4809209f220f2fef0 475 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 416 1.1E-104 T 09-03-2017 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 RG43_RS06160 fa2f867c0feac7d4809209f220f2fef0 475 SUPERFAMILY SSF50475 3 309 1.33E-81 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 RG43_RS06160 fa2f867c0feac7d4809209f220f2fef0 475 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 441 6.4E-126 T 09-03-2017 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 RG43_RS06160 fa2f867c0feac7d4809209f220f2fef0 475 SUPERFAMILY SSF143968 312 467 2.48E-41 T 09-03-2017 RG43_RS08535 3978cf8a73de06daa4cc0ef68ed7b6a9 394 Pfam PF07690 Major Facilitator Superfamily 18 346 9.4E-42 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS08535 3978cf8a73de06daa4cc0ef68ed7b6a9 394 SUPERFAMILY SSF103473 18 382 7.72E-64 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS08535 3978cf8a73de06daa4cc0ef68ed7b6a9 394 Gene3D G3DSA:1.20.1250.20 196 381 2.1E-15 T 09-03-2017 RG43_RS08535 3978cf8a73de06daa4cc0ef68ed7b6a9 394 Gene3D G3DSA:1.20.1250.20 18 177 1.5E-32 T 09-03-2017 RG43_RS20695 c071cac06b4c2889ecaee7cd6d365ae6 385 Gene3D G3DSA:1.10.10.60 339 358 6.3E-4 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS20695 c071cac06b4c2889ecaee7cd6d365ae6 385 Pfam PF13556 PucR C-terminal helix-turn-helix domain 323 381 2.9E-22 T 09-03-2017 IPR025736 PucR C-terminal helix-turn-helix domain RG43_RS20695 c071cac06b4c2889ecaee7cd6d365ae6 385 Pfam PF05651 Putative sugar diacid recognition 6 138 5.8E-49 T 09-03-2017 IPR008599 Putative sugar diacid recognition RG43_RS05710 86324675e7db0453453838039fc6f8f3 826 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 22 508 1.3E-137 T 09-03-2017 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein RG43_RS05710 86324675e7db0453453838039fc6f8f3 826 SUPERFAMILY SSF69279 12 187 1.87E-49 T 09-03-2017 RG43_RS05710 86324675e7db0453453838039fc6f8f3 826 Pfam PF05954 Phage late control gene D protein (GPD) 30 346 8.1E-62 T 09-03-2017 RG43_RS05710 86324675e7db0453453838039fc6f8f3 826 SUPERFAMILY SSF69255 374 462 3.14E-25 T 09-03-2017 RG43_RS05710 86324675e7db0453453838039fc6f8f3 826 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 14 506 1.5E-73 T 09-03-2017 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset RG43_RS05710 86324675e7db0453453838039fc6f8f3 826 SUPERFAMILY SSF69279 198 375 2.72E-51 T 09-03-2017 RG43_RS05710 86324675e7db0453453838039fc6f8f3 826 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 482 584 1.0E-34 T 09-03-2017 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain RG43_RS05710 86324675e7db0453453838039fc6f8f3 826 Gene3D G3DSA:3.55.50.10 106 199 9.9E-32 T 09-03-2017 RG43_RS05710 86324675e7db0453453838039fc6f8f3 826 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 603 743 2.7E-49 T 09-03-2017 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal RG43_RS05710 86324675e7db0453453838039fc6f8f3 826 Gene3D G3DSA:4.10.180.10 289 304 6.0E-9 T 09-03-2017 IPR027440 Capsid protein alpha-like domain RG43_RS05710 86324675e7db0453453838039fc6f8f3 826 Gene3D G3DSA:2.40.50.230 382 463 1.7E-25 T 09-03-2017 IPR006531 Gp5 N-terminal RG43_RS02010 f52750ee99564473a498ee530bc96164 412 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 22 409 3.4E-133 T 09-03-2017 IPR013355 Type IV pilus secretin PilQ GO:0009297|GO:0009306 RG43_RS02010 f52750ee99564473a498ee530bc96164 412 Pfam PF03958 Bacterial type II/III secretion system short domain 120 178 2.7E-9 T 09-03-2017 IPR005644 NolW-like RG43_RS02010 f52750ee99564473a498ee530bc96164 412 Pfam PF00263 Bacterial type II and III secretion system protein 250 409 4.9E-45 T 09-03-2017 IPR004846 Type II/III secretion system GO:0009306 RG43_RS02010 f52750ee99564473a498ee530bc96164 412 PRINTS PR00811 Bacterial general secretion pathway protein D signature 374 392 5.2E-12 T 09-03-2017 IPR001775 GspD/PilQ family RG43_RS02010 f52750ee99564473a498ee530bc96164 412 PRINTS PR00811 Bacterial general secretion pathway protein D signature 397 411 5.2E-12 T 09-03-2017 IPR001775 GspD/PilQ family RG43_RS02010 f52750ee99564473a498ee530bc96164 412 PRINTS PR00811 Bacterial general secretion pathway protein D signature 246 270 5.2E-12 T 09-03-2017 IPR001775 GspD/PilQ family RG43_RS02010 f52750ee99564473a498ee530bc96164 412 PRINTS PR01032 Gene IV protein signature 271 294 2.5E-8 T 09-03-2017 RG43_RS02010 f52750ee99564473a498ee530bc96164 412 PRINTS PR01032 Gene IV protein signature 230 253 2.5E-8 T 09-03-2017 RG43_RS02010 f52750ee99564473a498ee530bc96164 412 PRINTS PR01032 Gene IV protein signature 337 365 2.5E-8 T 09-03-2017 RG43_RS02010 f52750ee99564473a498ee530bc96164 412 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 355 388 - T 09-03-2017 IPR004845 Type II secretion system GspD, conserved site GO:0008565 RG43_RS02010 f52750ee99564473a498ee530bc96164 412 SMART SM00965 46 94 4.3E-5 T 09-03-2017 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 RG43_RS12250 a5bb01be7d509a413f4dd093948b3063 334 Gene3D G3DSA:3.10.350.10 40 86 1.3E-7 T 09-03-2017 IPR018392 LysM domain RG43_RS12250 a5bb01be7d509a413f4dd093948b3063 334 Gene3D G3DSA:2.40.440.10 90 234 5.9E-35 T 09-03-2017 RG43_RS12250 a5bb01be7d509a413f4dd093948b3063 334 SMART SM00257 41 85 4.0E-8 T 09-03-2017 IPR018392 LysM domain RG43_RS12250 a5bb01be7d509a413f4dd093948b3063 334 Pfam PF01476 LysM domain 42 85 1.7E-8 T 09-03-2017 IPR018392 LysM domain RG43_RS12250 a5bb01be7d509a413f4dd093948b3063 334 SUPERFAMILY SSF141523 94 232 8.89E-30 T 09-03-2017 RG43_RS12250 a5bb01be7d509a413f4dd093948b3063 334 Pfam PF03734 L,D-transpeptidase catalytic domain 97 232 4.0E-21 T 09-03-2017 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 RG43_RS15740 876dc3992dc25108fa8cc0e9b1bc8d16 219 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 213 1.5E-42 T 09-03-2017 RG43_RS15740 876dc3992dc25108fa8cc0e9b1bc8d16 219 ProSitePatterns PS01243 Bax inhibitor-1 family signature. 87 117 - T 09-03-2017 IPR006213 Bax inhibitor 1, conserved site GO:0016021|GO:0043066 RG43_RS14985 6d811a959a23ed1a3377425992e348e2 180 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 56.44 T 09-03-2017 IPR022987 Uncharacterised protein family UPF0227 RG43_RS14985 6d811a959a23ed1a3377425992e348e2 180 SUPERFAMILY SSF53474 2 176 4.47E-8 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS14985 6d811a959a23ed1a3377425992e348e2 180 Gene3D G3DSA:3.40.50.1820 2 77 4.9E-5 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS14985 6d811a959a23ed1a3377425992e348e2 180 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 6.8E-72 T 09-03-2017 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA RG43_RS25290 a1d7a82621861acf64f75e6389f719d2 87 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 3 73 0.005 T 09-03-2017 RG43_RS25290 a1d7a82621861acf64f75e6389f719d2 87 Pfam PF13710 ACT domain 13 73 1.6E-27 T 09-03-2017 RG43_RS25290 a1d7a82621861acf64f75e6389f719d2 87 Gene3D G3DSA:3.30.70.260 1 74 3.3E-14 T 09-03-2017 RG43_RS25290 a1d7a82621861acf64f75e6389f719d2 87 SUPERFAMILY SSF55021 3 75 4.12E-12 T 09-03-2017 RG43_RS24810 9d7cacf25e6bf152f5cf75cd6bcaff38 497 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 9 458 1.7E-191 T 09-03-2017 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 RG43_RS24810 9d7cacf25e6bf152f5cf75cd6bcaff38 497 SUPERFAMILY SSF143968 326 489 3.4E-66 T 09-03-2017 RG43_RS24810 9d7cacf25e6bf152f5cf75cd6bcaff38 497 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 4 490 73.603 T 09-03-2017 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 RG43_RS24810 9d7cacf25e6bf152f5cf75cd6bcaff38 497 Gene3D G3DSA:1.20.5.570 458 497 7.7E-23 T 09-03-2017 RG43_RS24810 9d7cacf25e6bf152f5cf75cd6bcaff38 497 Gene3D G3DSA:3.40.1670.10 340 457 1.7E-55 T 09-03-2017 RG43_RS24810 9d7cacf25e6bf152f5cf75cd6bcaff38 497 SUPERFAMILY SSF50475 6 325 2.43E-128 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 RG43_RS24810 9d7cacf25e6bf152f5cf75cd6bcaff38 497 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 14 434 5.7E-172 T 09-03-2017 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 RG43_RS22095 4ce5d0b35e18fa2b65f630bb0004586d 368 TIGRFAM TIGR03547 muta_rot_YjhT: mutatrotase, YjhT family 22 359 2.3E-144 T 09-03-2017 IPR019936 Mutatrotase, YjhT-like RG43_RS22095 4ce5d0b35e18fa2b65f630bb0004586d 368 SUPERFAMILY SSF117281 191 356 2.35E-37 T 09-03-2017 RG43_RS22095 4ce5d0b35e18fa2b65f630bb0004586d 368 SUPERFAMILY SSF117281 40 156 2.35E-37 T 09-03-2017 RG43_RS22095 4ce5d0b35e18fa2b65f630bb0004586d 368 Gene3D G3DSA:2.120.10.80 39 159 3.1E-38 T 09-03-2017 IPR015915 Kelch-type beta propeller GO:0005515 RG43_RS22095 4ce5d0b35e18fa2b65f630bb0004586d 368 Gene3D G3DSA:2.120.10.80 191 363 3.1E-38 T 09-03-2017 IPR015915 Kelch-type beta propeller GO:0005515 RG43_RS22095 4ce5d0b35e18fa2b65f630bb0004586d 368 Pfam PF01344 Kelch motif 75 122 7.4E-9 T 09-03-2017 IPR006652 Kelch repeat type 1 GO:0005515 RG43_RS22095 4ce5d0b35e18fa2b65f630bb0004586d 368 Hamap MF_01195 N-acetylneuraminate epimerase [nanM]. 1 368 45.532 T 09-03-2017 IPR019936 Mutatrotase, YjhT-like RG43_RS10215 5e83dfcf839d137d970df277dde95d3b 420 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 98 148 7.4E-5 T 09-03-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RG43_RS10215 5e83dfcf839d137d970df277dde95d3b 420 SUPERFAMILY SSF56349 98 389 1.0E-54 T 09-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RG43_RS10215 5e83dfcf839d137d970df277dde95d3b 420 Gene3D G3DSA:1.10.443.10 210 386 5.9E-21 T 09-03-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RG43_RS10215 5e83dfcf839d137d970df277dde95d3b 420 Pfam PF00589 Phage integrase family 225 383 3.7E-18 T 09-03-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RG43_RS10215 5e83dfcf839d137d970df277dde95d3b 420 Gene3D G3DSA:1.10.150.130 98 189 2.7E-16 T 09-03-2017 IPR023109 Integrase/recombinase, N-terminal RG43_RS10215 5e83dfcf839d137d970df277dde95d3b 420 Pfam PF13356 Domain of unknown function (DUF4102) 3 87 8.0E-17 T 09-03-2017 IPR025166 Domain of unknown function DUF4102 RG43_RS10895 3131d9199770ae47fb7c4ef2c98a6595 610 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 607 30.437 T 09-03-2017 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 RG43_RS10895 3131d9199770ae47fb7c4ef2c98a6595 610 Pfam PF14520 Helix-hairpin-helix domain 557 609 2.4E-8 T 09-03-2017 RG43_RS10895 3131d9199770ae47fb7c4ef2c98a6595 610 Pfam PF02151 UvrB/uvrC motif 205 237 4.8E-10 T 09-03-2017 IPR001943 UVR domain GO:0005515 RG43_RS10895 3131d9199770ae47fb7c4ef2c98a6595 610 Gene3D G3DSA:1.10.150.20 555 609 3.3E-22 T 09-03-2017 RG43_RS10895 3131d9199770ae47fb7c4ef2c98a6595 610 Pfam PF01541 GIY-YIG catalytic domain 18 93 3.4E-11 T 09-03-2017 IPR000305 GIY-YIG nuclease superfamily RG43_RS10895 3131d9199770ae47fb7c4ef2c98a6595 610 SUPERFAMILY SSF46600 190 243 3.4E-14 T 09-03-2017 IPR001943 UVR domain GO:0005515 RG43_RS10895 3131d9199770ae47fb7c4ef2c98a6595 610 SUPERFAMILY SSF82771 17 100 3.01E-24 T 09-03-2017 IPR000305 GIY-YIG nuclease superfamily RG43_RS10895 3131d9199770ae47fb7c4ef2c98a6595 610 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 386 542 3.8E-45 T 09-03-2017 IPR001162 UvrC family homology region RG43_RS10895 3131d9199770ae47fb7c4ef2c98a6595 610 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 9 589 3.7E-241 T 09-03-2017 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 RG43_RS10895 3131d9199770ae47fb7c4ef2c98a6595 610 SMART SM00465 17 98 2.2E-23 T 09-03-2017 IPR000305 GIY-YIG nuclease superfamily RG43_RS10895 3131d9199770ae47fb7c4ef2c98a6595 610 Gene3D G3DSA:3.40.1440.10 17 97 2.1E-11 T 09-03-2017 IPR027299 GIY-YIG domain RG43_RS10895 3131d9199770ae47fb7c4ef2c98a6595 610 Gene3D G3DSA:4.10.860.10 183 243 1.5E-22 T 09-03-2017 IPR001943 UVR domain GO:0005515 RG43_RS10895 3131d9199770ae47fb7c4ef2c98a6595 610 SMART SM00278 588 607 2.9 T 09-03-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RG43_RS10895 3131d9199770ae47fb7c4ef2c98a6595 610 SMART SM00278 556 575 0.76 T 09-03-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RG43_RS10895 3131d9199770ae47fb7c4ef2c98a6595 610 SUPERFAMILY SSF47781 521 606 2.22E-17 T 09-03-2017 IPR010994 RuvA domain 2-like RG43_RS23215 c1956ba4f44fc32d2743103cc50fac91 229 SUPERFAMILY SSF81901 24 102 1.12E-11 T 09-03-2017 RG43_RS23215 c1956ba4f44fc32d2743103cc50fac91 229 SMART SM00671 35 66 3.3 T 09-03-2017 IPR006597 Sel1-like repeat RG43_RS23215 c1956ba4f44fc32d2743103cc50fac91 229 SMART SM00671 67 101 14.0 T 09-03-2017 IPR006597 Sel1-like repeat RG43_RS23215 c1956ba4f44fc32d2743103cc50fac91 229 SMART SM00671 179 216 3.6E-4 T 09-03-2017 IPR006597 Sel1-like repeat RG43_RS23215 c1956ba4f44fc32d2743103cc50fac91 229 SMART SM00671 142 177 2.3E-5 T 09-03-2017 IPR006597 Sel1-like repeat RG43_RS23215 c1956ba4f44fc32d2743103cc50fac91 229 Gene3D G3DSA:1.25.40.10 25 227 7.5E-33 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS23215 c1956ba4f44fc32d2743103cc50fac91 229 Pfam PF08238 Sel1 repeat 85 101 68.0 T 09-03-2017 IPR006597 Sel1-like repeat RG43_RS23215 c1956ba4f44fc32d2743103cc50fac91 229 Pfam PF08238 Sel1 repeat 180 215 2.2E-5 T 09-03-2017 IPR006597 Sel1-like repeat RG43_RS23215 c1956ba4f44fc32d2743103cc50fac91 229 Pfam PF08238 Sel1 repeat 48 66 0.031 T 09-03-2017 IPR006597 Sel1-like repeat RG43_RS23215 c1956ba4f44fc32d2743103cc50fac91 229 Pfam PF08238 Sel1 repeat 143 173 1.7E-4 T 09-03-2017 IPR006597 Sel1-like repeat RG43_RS23215 c1956ba4f44fc32d2743103cc50fac91 229 SUPERFAMILY SSF81901 85 215 1.74E-19 T 09-03-2017 RG43_RS15730 dc8ab3c05eace93812417bcdcbf160b7 372 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 62 207 1.6E-28 T 09-03-2017 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS15730 dc8ab3c05eace93812417bcdcbf160b7 372 Gene3D G3DSA:3.40.50.700 49 226 1.7E-56 T 09-03-2017 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS15730 dc8ab3c05eace93812417bcdcbf160b7 372 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 16 45 1.1E-6 T 09-03-2017 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RG43_RS15730 dc8ab3c05eace93812417bcdcbf160b7 372 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 227 308 1.4E-31 T 09-03-2017 IPR027394 Cytochrome-c3 hydrogenase, C-terminal RG43_RS15730 dc8ab3c05eace93812417bcdcbf160b7 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 284 297 1.0E-118 T 09-03-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 RG43_RS15730 dc8ab3c05eace93812417bcdcbf160b7 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 214 231 1.0E-118 T 09-03-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 RG43_RS15730 dc8ab3c05eace93812417bcdcbf160b7 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 232 250 1.0E-118 T 09-03-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 RG43_RS15730 dc8ab3c05eace93812417bcdcbf160b7 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 256 282 1.0E-118 T 09-03-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 RG43_RS15730 dc8ab3c05eace93812417bcdcbf160b7 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 159 183 1.0E-118 T 09-03-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 RG43_RS15730 dc8ab3c05eace93812417bcdcbf160b7 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 188 211 1.0E-118 T 09-03-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 RG43_RS15730 dc8ab3c05eace93812417bcdcbf160b7 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 116 139 1.0E-118 T 09-03-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 RG43_RS15730 dc8ab3c05eace93812417bcdcbf160b7 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 47 69 1.0E-118 T 09-03-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 RG43_RS15730 dc8ab3c05eace93812417bcdcbf160b7 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 70 94 1.0E-118 T 09-03-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 RG43_RS15730 dc8ab3c05eace93812417bcdcbf160b7 372 SUPERFAMILY SSF56770 46 310 6.54E-87 T 09-03-2017 RG43_RS15730 dc8ab3c05eace93812417bcdcbf160b7 372 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 2 360 7.2E-204 T 09-03-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 RG43_RS15730 dc8ab3c05eace93812417bcdcbf160b7 372 Gene3D G3DSA:4.10.480.10 227 310 1.6E-38 T 09-03-2017 IPR027394 Cytochrome-c3 hydrogenase, C-terminal RG43_RS15730 dc8ab3c05eace93812417bcdcbf160b7 372 PIRSF PIRSF000310 5 357 2.8E-146 T 09-03-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 RG43_RS26960 1d0a0815f10a9ad7c351ab4b447a419e 121 Gene3D G3DSA:1.10.10.60 16 102 6.5E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS26960 1d0a0815f10a9ad7c351ab4b447a419e 121 Pfam PF01527 Transposase 8 87 2.4E-22 T 09-03-2017 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RG43_RS26960 1d0a0815f10a9ad7c351ab4b447a419e 121 SUPERFAMILY SSF46689 9 103 2.69E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS16310 fc2e3f0be510d1db6d6f645aabe33119 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 242 8.5E-71 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RG43_RS16310 fc2e3f0be510d1db6d6f645aabe33119 243 Gene3D G3DSA:3.40.190.10 109 201 8.2E-30 T 09-03-2017 RG43_RS16310 fc2e3f0be510d1db6d6f645aabe33119 243 SUPERFAMILY SSF53850 1 242 1.03E-73 T 09-03-2017 RG43_RS16310 fc2e3f0be510d1db6d6f645aabe33119 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 241 1.1E-90 T 09-03-2017 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 RG43_RS16310 fc2e3f0be510d1db6d6f645aabe33119 243 Gene3D G3DSA:3.40.190.10 203 242 1.2E-43 T 09-03-2017 RG43_RS16310 fc2e3f0be510d1db6d6f645aabe33119 243 Gene3D G3DSA:3.40.190.10 20 108 1.2E-43 T 09-03-2017 RG43_RS16310 fc2e3f0be510d1db6d6f645aabe33119 243 SMART SM00079 22 243 4.2E-4 T 09-03-2017 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 RG43_RS16310 fc2e3f0be510d1db6d6f645aabe33119 243 SMART SM00062 22 242 2.2E-88 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RG43_RS16310 fc2e3f0be510d1db6d6f645aabe33119 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 09-03-2017 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 RG43_RS25900 769c9d912b3b1fd480511933bb86c876 125 Pfam PF06755 CbtA_toxin of type IV toxin-antitoxin system 1 112 3.4E-61 T 09-03-2017 IPR009610 CbtA toxin of type IV toxin-antitoxin system RG43_RS05005 6c1118c3ce3ec6672adb13c45e942fac 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 1.7E-95 T 09-03-2017 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RG43_RS05005 6c1118c3ce3ec6672adb13c45e942fac 243 SUPERFAMILY SSF75217 75 242 2.35E-51 T 09-03-2017 IPR029028 Alpha/beta knot methyltransferases RG43_RS05005 6c1118c3ce3ec6672adb13c45e942fac 243 Gene3D G3DSA:2.40.240.20 1 70 2.5E-30 T 09-03-2017 RG43_RS05005 6c1118c3ce3ec6672adb13c45e942fac 243 SUPERFAMILY SSF88697 2 70 4.47E-18 T 09-03-2017 IPR015947 PUA-like domain RG43_RS05005 6c1118c3ce3ec6672adb13c45e942fac 243 Gene3D G3DSA:3.40.1280.10 75 242 8.0E-59 T 09-03-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RG43_RS05005 6c1118c3ce3ec6672adb13c45e942fac 243 Pfam PF04452 RNA methyltransferase 20 236 9.2E-74 T 09-03-2017 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RG43_RS05005 6c1118c3ce3ec6672adb13c45e942fac 243 PIRSF PIRSF015601 2 242 1.4E-51 T 09-03-2017 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RG43_RS18530 cb28374773d04453101b0ab4bb57dea2 135 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 5.6E-62 T 09-03-2017 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 RG43_RS18530 cb28374773d04453101b0ab4bb57dea2 135 SMART SM00422 1 70 4.4E-30 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RG43_RS18530 cb28374773d04453101b0ab4bb57dea2 135 SUPERFAMILY SSF46955 1 126 1.39E-35 T 09-03-2017 IPR009061 Putative DNA-binding domain RG43_RS18530 cb28374773d04453101b0ab4bb57dea2 135 Gene3D G3DSA:1.10.1660.10 1 55 3.1E-23 T 09-03-2017 RG43_RS18530 cb28374773d04453101b0ab4bb57dea2 135 Pfam PF13411 MerR HTH family regulatory protein 1 66 6.0E-18 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RG43_RS18530 cb28374773d04453101b0ab4bb57dea2 135 Gene3D G3DSA:1.10.1660.10 56 131 1.9E-25 T 09-03-2017 RG43_RS18530 cb28374773d04453101b0ab4bb57dea2 135 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RG43_RS18530 cb28374773d04453101b0ab4bb57dea2 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 6.6E-7 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RG43_RS18530 cb28374773d04453101b0ab4bb57dea2 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 6.6E-7 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RG43_RS18530 cb28374773d04453101b0ab4bb57dea2 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 6.6E-7 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RG43_RS22015 fd0ec916e309d0da0b2546121bdb39e9 486 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 24 188 7.1E-54 T 09-03-2017 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 RG43_RS22015 fd0ec916e309d0da0b2546121bdb39e9 486 SUPERFAMILY SSF48179 283 484 6.46E-68 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RG43_RS22015 fd0ec916e309d0da0b2546121bdb39e9 486 SUPERFAMILY SSF51735 10 281 4.72E-95 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS22015 fd0ec916e309d0da0b2546121bdb39e9 486 Gene3D G3DSA:3.40.50.720 10 281 1.8E-112 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS22015 fd0ec916e309d0da0b2546121bdb39e9 486 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 216 463 3.2E-101 T 09-03-2017 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 RG43_RS22015 fd0ec916e309d0da0b2546121bdb39e9 486 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 218 230 - T 09-03-2017 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 RG43_RS22015 fd0ec916e309d0da0b2546121bdb39e9 486 PRINTS PR00084 Mannitol dehydrogenase signature 179 192 1.9E-20 T 09-03-2017 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 RG43_RS22015 fd0ec916e309d0da0b2546121bdb39e9 486 PRINTS PR00084 Mannitol dehydrogenase signature 25 35 1.9E-20 T 09-03-2017 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 RG43_RS22015 fd0ec916e309d0da0b2546121bdb39e9 486 PRINTS PR00084 Mannitol dehydrogenase signature 248 263 1.9E-20 T 09-03-2017 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 RG43_RS22015 fd0ec916e309d0da0b2546121bdb39e9 486 PRINTS PR00084 Mannitol dehydrogenase signature 218 231 1.9E-20 T 09-03-2017 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 RG43_RS22015 fd0ec916e309d0da0b2546121bdb39e9 486 Gene3D G3DSA:1.10.1040.10 283 485 7.9E-77 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RG43_RS07950 a6b2614dd38e2ed78a76487d5b91d6c4 415 ProSitePatterns PS00896 LacY family proton/sugar symporters signature 1. 67 81 - T 09-03-2017 IPR018457 LacY/RafB permease family, conserved site GO:0006810|GO:0016020 RG43_RS07950 a6b2614dd38e2ed78a76487d5b91d6c4 415 SUPERFAMILY SSF103473 12 403 4.05E-46 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS07950 a6b2614dd38e2ed78a76487d5b91d6c4 415 Pfam PF01306 LacY proton/sugar symporter 5 410 2.5E-194 T 09-03-2017 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 RG43_RS07950 a6b2614dd38e2ed78a76487d5b91d6c4 415 Gene3D G3DSA:1.20.1250.20 8 194 1.5E-28 T 09-03-2017 RG43_RS07950 a6b2614dd38e2ed78a76487d5b91d6c4 415 Gene3D G3DSA:1.20.1250.20 206 408 7.1E-42 T 09-03-2017 RG43_RS07950 a6b2614dd38e2ed78a76487d5b91d6c4 415 TIGRFAM TIGR00882 2A0105: oligosaccharide:H+ symporter 9 399 2.3E-179 T 09-03-2017 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 RG43_RS07950 a6b2614dd38e2ed78a76487d5b91d6c4 415 PRINTS PR00174 LacY proton/sugar symporter family signature 258 279 7.8E-90 T 09-03-2017 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 RG43_RS07950 a6b2614dd38e2ed78a76487d5b91d6c4 415 PRINTS PR00174 LacY proton/sugar symporter family signature 313 332 7.8E-90 T 09-03-2017 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 RG43_RS07950 a6b2614dd38e2ed78a76487d5b91d6c4 415 PRINTS PR00174 LacY proton/sugar symporter family signature 211 239 7.8E-90 T 09-03-2017 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 RG43_RS07950 a6b2614dd38e2ed78a76487d5b91d6c4 415 PRINTS PR00174 LacY proton/sugar symporter family signature 106 128 7.8E-90 T 09-03-2017 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 RG43_RS07950 a6b2614dd38e2ed78a76487d5b91d6c4 415 PRINTS PR00174 LacY proton/sugar symporter family signature 344 364 7.8E-90 T 09-03-2017 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 RG43_RS07950 a6b2614dd38e2ed78a76487d5b91d6c4 415 PRINTS PR00174 LacY proton/sugar symporter family signature 71 100 7.8E-90 T 09-03-2017 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 RG43_RS07950 a6b2614dd38e2ed78a76487d5b91d6c4 415 PRINTS PR00174 LacY proton/sugar symporter family signature 282 308 7.8E-90 T 09-03-2017 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 RG43_RS07950 a6b2614dd38e2ed78a76487d5b91d6c4 415 PRINTS PR00174 LacY proton/sugar symporter family signature 148 166 7.8E-90 T 09-03-2017 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 RG43_RS07950 a6b2614dd38e2ed78a76487d5b91d6c4 415 ProSitePatterns PS00897 LacY family proton/sugar symporters signature 2. 278 292 - T 09-03-2017 IPR018457 LacY/RafB permease family, conserved site GO:0006810|GO:0016020 RG43_RS25130 a5d35588a6a9a21786d554b8e0bda32d 551 Gene3D G3DSA:3.30.1120.10 468 536 4.7E-4 T 09-03-2017 RG43_RS25130 a5d35588a6a9a21786d554b8e0bda32d 551 Gene3D G3DSA:3.40.720.10 84 467 1.3E-92 T 09-03-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RG43_RS25130 a5d35588a6a9a21786d554b8e0bda32d 551 ProSitePatterns PS00149 Sulfatases signature 2. 180 190 - T 09-03-2017 IPR024607 Sulfatase, conserved site RG43_RS25130 a5d35588a6a9a21786d554b8e0bda32d 551 ProSitePatterns PS00523 Sulfatases signature 1. 134 146 - T 09-03-2017 IPR024607 Sulfatase, conserved site RG43_RS25130 a5d35588a6a9a21786d554b8e0bda32d 551 SUPERFAMILY SSF53649 83 542 1.12E-95 T 09-03-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RG43_RS25130 a5d35588a6a9a21786d554b8e0bda32d 551 Pfam PF00884 Sulfatase 86 418 2.4E-87 T 09-03-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RG43_RS10290 a669db69c6b4b9191b40bcd9ce2ed579 141 Gene3D G3DSA:1.10.3600.10 1 120 2.1E-48 T 09-03-2017 IPR009364 Putative bacterial toxin ydaT RG43_RS10290 a669db69c6b4b9191b40bcd9ce2ed579 141 Pfam PF06254 Putative bacterial toxin ydaT 48 102 9.7E-10 T 09-03-2017 IPR009364 Putative bacterial toxin ydaT RG43_RS23990 41c745e1144737d3a54930399d749fd8 106 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 95 1.9E-21 T 09-03-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RG43_RS23990 41c745e1144737d3a54930399d749fd8 106 Gene3D G3DSA:3.40.50.2300 2 101 1.3E-41 T 09-03-2017 RG43_RS23990 41c745e1144737d3a54930399d749fd8 106 SUPERFAMILY SSF52794 3 101 1.71E-35 T 09-03-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RG43_RS23990 41c745e1144737d3a54930399d749fd8 106 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 5 89 3.3E-41 T 09-03-2017 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 RG43_RS13150 03df312d10c6d3d3b40c9b5d3442532a 565 SMART SM01274 81 261 5.2E-108 T 09-03-2017 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RG43_RS13150 03df312d10c6d3d3b40c9b5d3442532a 565 Pfam PF03949 Malic enzyme, NAD binding domain 271 530 5.8E-104 T 09-03-2017 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 RG43_RS13150 03df312d10c6d3d3b40c9b5d3442532a 565 SMART SM00919 271 531 3.0E-130 T 09-03-2017 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 RG43_RS13150 03df312d10c6d3d3b40c9b5d3442532a 565 Gene3D G3DSA:3.40.50.10380 17 268 1.0E-116 T 09-03-2017 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RG43_RS13150 03df312d10c6d3d3b40c9b5d3442532a 565 PRINTS PR00072 Malic enzyme signature 267 283 3.1E-74 T 09-03-2017 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 RG43_RS13150 03df312d10c6d3d3b40c9b5d3442532a 565 PRINTS PR00072 Malic enzyme signature 87 111 3.1E-74 T 09-03-2017 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 RG43_RS13150 03df312d10c6d3d3b40c9b5d3442532a 565 PRINTS PR00072 Malic enzyme signature 298 314 3.1E-74 T 09-03-2017 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 RG43_RS13150 03df312d10c6d3d3b40c9b5d3442532a 565 PRINTS PR00072 Malic enzyme signature 183 205 3.1E-74 T 09-03-2017 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 RG43_RS13150 03df312d10c6d3d3b40c9b5d3442532a 565 PRINTS PR00072 Malic enzyme signature 147 176 3.1E-74 T 09-03-2017 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 RG43_RS13150 03df312d10c6d3d3b40c9b5d3442532a 565 PRINTS PR00072 Malic enzyme signature 408 424 3.1E-74 T 09-03-2017 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 RG43_RS13150 03df312d10c6d3d3b40c9b5d3442532a 565 PRINTS PR00072 Malic enzyme signature 242 260 3.1E-74 T 09-03-2017 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 RG43_RS13150 03df312d10c6d3d3b40c9b5d3442532a 565 PIRSF PIRSF000106 1 563 1.0E-226 T 09-03-2017 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 RG43_RS13150 03df312d10c6d3d3b40c9b5d3442532a 565 SUPERFAMILY SSF53223 7 270 2.88E-110 T 09-03-2017 RG43_RS13150 03df312d10c6d3d3b40c9b5d3442532a 565 SUPERFAMILY SSF51735 271 562 5.03E-94 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS13150 03df312d10c6d3d3b40c9b5d3442532a 565 Pfam PF00390 Malic enzyme, N-terminal domain 81 261 4.6E-80 T 09-03-2017 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RG43_RS13150 03df312d10c6d3d3b40c9b5d3442532a 565 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 4 565 72.724 T 09-03-2017 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38 RG43_RS13150 03df312d10c6d3d3b40c9b5d3442532a 565 Gene3D G3DSA:3.40.50.720 269 562 1.3E-108 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS13150 03df312d10c6d3d3b40c9b5d3442532a 565 ProSitePatterns PS00331 Malic enzymes signature. 267 283 - T 09-03-2017 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 RG43_RS22000 b5a8bb2722b7a816e15a3d8297fdbd0b 127 SUPERFAMILY SSF160719 17 112 1.44E-7 T 09-03-2017 RG43_RS22000 b5a8bb2722b7a816e15a3d8297fdbd0b 127 Pfam PF04965 Gene 25-like lysozyme 20 104 5.0E-10 T 09-03-2017 IPR007048 GpW/Gp25/anti-adapter protein IraD RG43_RS22000 b5a8bb2722b7a816e15a3d8297fdbd0b 127 Hamap MF_02010 Anti-adapter protein IraD [iraD]. 1 122 42.397 T 09-03-2017 IPR023776 Anti-adapter protein, IraD GO:0006974|GO:0043856 RG43_RS05430 25a0e84d10a92e6c0a261bb2a740aebf 395 Gene3D G3DSA:3.40.50.1370 17 174 2.8E-32 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RG43_RS05430 25a0e84d10a92e6c0a261bb2a740aebf 395 Gene3D G3DSA:3.40.50.1370 175 362 8.7E-59 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RG43_RS05430 25a0e84d10a92e6c0a261bb2a740aebf 395 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 21 177 1.3E-22 T 09-03-2017 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 RG43_RS05430 25a0e84d10a92e6c0a261bb2a740aebf 395 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 186 372 2.6E-41 T 09-03-2017 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 RG43_RS05430 25a0e84d10a92e6c0a261bb2a740aebf 395 SUPERFAMILY SSF53671 18 372 1.19E-57 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RG43_RS05430 25a0e84d10a92e6c0a261bb2a740aebf 395 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 322 331 2.7E-8 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RG43_RS05430 25a0e84d10a92e6c0a261bb2a740aebf 395 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 340 363 2.7E-8 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RG43_RS05430 25a0e84d10a92e6c0a261bb2a740aebf 395 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 66 85 2.7E-8 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RG43_RS05430 25a0e84d10a92e6c0a261bb2a740aebf 395 PRINTS PR00101 Aspartate carbamoyltransferase signature 56 78 3.7E-7 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RG43_RS05430 25a0e84d10a92e6c0a261bb2a740aebf 395 PRINTS PR00101 Aspartate carbamoyltransferase signature 94 103 3.7E-7 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RG43_RS05430 25a0e84d10a92e6c0a261bb2a740aebf 395 PRINTS PR00101 Aspartate carbamoyltransferase signature 163 180 3.7E-7 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RG43_RS05430 25a0e84d10a92e6c0a261bb2a740aebf 395 TIGRFAM TIGR03316 ygeW: knotted carbamoyltransferase YgeW 5 393 2.6E-204 T 09-03-2017 IPR017702 Putative carbamoyltransferase YgeW RG43_RS20400 75ebcea3e86d16d8ecad1301d08791b8 34 Pfam PF13708 Domain of unknown function (DUF4942) 1 30 1.2E-5 T 09-03-2017 IPR031339 Domain of unknown function DUF4942 RG43_RS06790 733b113d00017964d4c90f6e6325c31c 451 Gene3D G3DSA:3.30.870.10 254 395 1.0E-15 T 09-03-2017 RG43_RS06790 733b113d00017964d4c90f6e6325c31c 451 Gene3D G3DSA:3.30.870.10 26 153 5.9E-16 T 09-03-2017 RG43_RS06790 733b113d00017964d4c90f6e6325c31c 451 Pfam PF13091 PLD-like domain 40 153 2.1E-6 T 09-03-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 RG43_RS06790 733b113d00017964d4c90f6e6325c31c 451 Pfam PF13091 PLD-like domain 257 404 2.4E-23 T 09-03-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 RG43_RS06790 733b113d00017964d4c90f6e6325c31c 451 SMART SM00155 133 159 0.012 T 09-03-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 RG43_RS06790 733b113d00017964d4c90f6e6325c31c 451 SMART SM00155 352 379 2.9E-5 T 09-03-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 RG43_RS06790 733b113d00017964d4c90f6e6325c31c 451 SUPERFAMILY SSF56024 253 395 8.48E-19 T 09-03-2017 RG43_RS06790 733b113d00017964d4c90f6e6325c31c 451 SUPERFAMILY SSF56024 9 208 1.32E-27 T 09-03-2017 RG43_RS06790 733b113d00017964d4c90f6e6325c31c 451 PIRSF PIRSF000850 1 451 2.1E-269 T 09-03-2017 IPR016270 Phospholipase D, phosphatidylserine synthase type GO:0008654|GO:0016780 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|Reactome: R-HSA-1483148 RG43_RS13080 b3e6aac329f5e8b4182a20611aa3a93c 385 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 2 364 2.3E-151 T 09-03-2017 IPR023867 Anaerobic sulphatase maturase, radical SAM GO:0016491 RG43_RS13080 b3e6aac329f5e8b4182a20611aa3a93c 385 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 158 371 7.0E-13 T 09-03-2017 RG43_RS13080 b3e6aac329f5e8b4182a20611aa3a93c 385 Pfam PF13186 Iron-sulfur cluster-binding domain 263 318 7.3E-5 T 09-03-2017 IPR023885 4Fe4S-binding SPASM domain RG43_RS13080 b3e6aac329f5e8b4182a20611aa3a93c 385 Pfam PF13353 4Fe-4S single cluster domain 11 132 6.5E-7 T 09-03-2017 RG43_RS13080 b3e6aac329f5e8b4182a20611aa3a93c 385 Pfam PF04055 Radical SAM superfamily 11 174 1.9E-15 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 RG43_RS13080 b3e6aac329f5e8b4182a20611aa3a93c 385 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 265 345 2.4E-18 T 09-03-2017 IPR023885 4Fe4S-binding SPASM domain RG43_RS13080 b3e6aac329f5e8b4182a20611aa3a93c 385 Gene3D G3DSA:3.20.20.70 11 334 4.5E-49 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS13080 b3e6aac329f5e8b4182a20611aa3a93c 385 SUPERFAMILY SSF102114 10 328 1.09E-44 T 09-03-2017 RG43_RS01835 3ded1f20fe1d772ac81256483752151d 339 TIGRFAM TIGR03399 RNA_3prim_cycl: RNA 3'-phosphate cyclase 6 325 1.6E-119 T 09-03-2017 IPR017770 RNA 3'-terminal phosphate cyclase type 1 GO:0003963|GO:0006396 RG43_RS01835 3ded1f20fe1d772ac81256483752151d 339 SUPERFAMILY SSF52913 185 279 2.09E-22 T 09-03-2017 IPR013791 RNA 3'-terminal phosphate cyclase, insert domain RG43_RS01835 3ded1f20fe1d772ac81256483752151d 339 SUPERFAMILY SSF55205 5 184 1.37E-63 T 09-03-2017 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 RG43_RS01835 3ded1f20fe1d772ac81256483752151d 339 Hamap MF_00200 RNA 3'-terminal phosphate cyclase [rtcA]. 5 339 38.169 T 09-03-2017 IPR017770 RNA 3'-terminal phosphate cyclase type 1 GO:0003963|GO:0006396 RG43_RS01835 3ded1f20fe1d772ac81256483752151d 339 PIRSF PIRSF005378 2 339 1.5E-114 T 09-03-2017 IPR000228 RNA 3'-terminal phosphate cyclase GO:0006396 RG43_RS01835 3ded1f20fe1d772ac81256483752151d 339 Pfam PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain 185 274 3.3E-9 T 09-03-2017 IPR013791 RNA 3'-terminal phosphate cyclase, insert domain RG43_RS01835 3ded1f20fe1d772ac81256483752151d 339 SUPERFAMILY SSF55205 278 337 2.35E-9 T 09-03-2017 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 RG43_RS01835 3ded1f20fe1d772ac81256483752151d 339 Pfam PF01137 RNA 3'-terminal phosphate cyclase 13 326 3.3E-77 T 09-03-2017 IPR023797 RNA 3'-terminal phosphate cyclase domain RG43_RS01835 3ded1f20fe1d772ac81256483752151d 339 Gene3D G3DSA:3.65.10.20 275 334 4.6E-87 T 09-03-2017 IPR023797 RNA 3'-terminal phosphate cyclase domain RG43_RS01835 3ded1f20fe1d772ac81256483752151d 339 Gene3D G3DSA:3.65.10.20 5 178 4.6E-87 T 09-03-2017 IPR023797 RNA 3'-terminal phosphate cyclase domain RG43_RS01835 3ded1f20fe1d772ac81256483752151d 339 ProSitePatterns PS01287 RNA 3'-terminal phosphate cyclase signature. 158 168 - T 09-03-2017 IPR020719 RNA 3'-terminal phosphate cyclase-like, conserved site RG43_RS01835 3ded1f20fe1d772ac81256483752151d 339 Gene3D G3DSA:3.30.360.20 186 274 1.4E-37 T 09-03-2017 IPR013791 RNA 3'-terminal phosphate cyclase, insert domain RG43_RS20620 5999fecca0b996f77df5fd1f7b39d539 450 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 209 277 8.1E-10 T 09-03-2017 IPR001478 PDZ domain GO:0005515 RG43_RS20620 5999fecca0b996f77df5fd1f7b39d539 450 Pfam PF02163 Peptidase family M50 11 438 2.0E-89 T 09-03-2017 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033 RG43_RS20620 5999fecca0b996f77df5fd1f7b39d539 450 Gene3D G3DSA:2.30.42.10 96 195 1.1E-10 T 09-03-2017 IPR001478 PDZ domain GO:0005515 RG43_RS20620 5999fecca0b996f77df5fd1f7b39d539 450 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 3 450 3.7E-184 T 09-03-2017 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 RG43_RS20620 5999fecca0b996f77df5fd1f7b39d539 450 SMART SM00228 115 186 0.11 T 09-03-2017 IPR001478 PDZ domain GO:0005515 RG43_RS20620 5999fecca0b996f77df5fd1f7b39d539 450 SMART SM00228 211 280 8.0E-12 T 09-03-2017 IPR001478 PDZ domain GO:0005515 RG43_RS20620 5999fecca0b996f77df5fd1f7b39d539 450 SUPERFAMILY SSF50156 86 194 1.58E-12 T 09-03-2017 IPR001478 PDZ domain GO:0005515 RG43_RS20620 5999fecca0b996f77df5fd1f7b39d539 450 SUPERFAMILY SSF50156 196 291 1.24E-17 T 09-03-2017 IPR001478 PDZ domain GO:0005515 RG43_RS20620 5999fecca0b996f77df5fd1f7b39d539 450 Gene3D G3DSA:2.30.42.10 207 296 1.0E-19 T 09-03-2017 IPR001478 PDZ domain GO:0005515 RG43_RS05535 0b48a9e1f99ef82a0bed4c2f17b46097 72 Pfam PF06004 Bacterial protein of unknown function (DUF903) 23 71 4.3E-24 T 09-03-2017 IPR010305 Protein of unknown function DUF903 RG43_RS05535 0b48a9e1f99ef82a0bed4c2f17b46097 72 Gene3D G3DSA:2.30.30.100 19 72 6.5E-31 T 09-03-2017 RG43_RS05535 0b48a9e1f99ef82a0bed4c2f17b46097 72 SUPERFAMILY SSF50182 21 71 3.11E-18 T 09-03-2017 IPR010920 LSM domain RG43_RS12320 08dd5b54d62f85862aa5458e8f543d41 418 Pfam PF16168 Adhesin of bacterial autotransporter system, probable stalk 99 159 1.5E-20 T 09-03-2017 IPR030930 Adhesin of bacterial autotransporter system RG43_RS12320 08dd5b54d62f85862aa5458e8f543d41 418 Gene3D G3DSA:2.160.20.20 11 393 1.0E-13 T 09-03-2017 IPR012332 P22 tailspike C-terminal domain-like RG43_RS12320 08dd5b54d62f85862aa5458e8f543d41 418 Pfam PF03212 Pertactin 329 403 1.9E-5 T 09-03-2017 IPR004899 Pertactin, central region RG43_RS12320 08dd5b54d62f85862aa5458e8f543d41 418 SUPERFAMILY SSF51126 39 394 6.91E-11 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor RG43_RS12320 08dd5b54d62f85862aa5458e8f543d41 418 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 149 179 5.9E-5 T 09-03-2017 IPR030930 Adhesin of bacterial autotransporter system RG43_RS07510 3278033723195c2771778a064e10cf2f 395 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 278 298 - T 09-03-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 RG43_RS07510 3278033723195c2771778a064e10cf2f 395 Gene3D G3DSA:1.20.1090.10 203 394 1.1E-64 T 09-03-2017 RG43_RS07510 3278033723195c2771778a064e10cf2f 395 Gene3D G3DSA:3.40.50.1970 22 202 2.9E-52 T 09-03-2017 RG43_RS07510 3278033723195c2771778a064e10cf2f 395 Pfam PF00465 Iron-containing alcohol dehydrogenase 27 387 3.8E-112 T 09-03-2017 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 RG43_RS07510 3278033723195c2771778a064e10cf2f 395 SUPERFAMILY SSF56796 22 393 1.16E-113 T 09-03-2017 RG43_RS07510 3278033723195c2771778a064e10cf2f 395 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 191 219 - T 09-03-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 RG43_RS24590 2ab67f99e9eac535d94aa6e882142578 290 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 1 281 23.458 T 09-03-2017 IPR023679 Uncharacterised protein family UPF0761, bacterial RG43_RS24590 2ab67f99e9eac535d94aa6e882142578 290 Pfam PF03631 Virulence factor BrkB 29 274 7.4E-57 T 09-03-2017 IPR017039 Virulence factor BrkB RG43_RS24590 2ab67f99e9eac535d94aa6e882142578 290 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 18 275 3.0E-106 T 09-03-2017 IPR017039 Virulence factor BrkB RG43_RS24590 2ab67f99e9eac535d94aa6e882142578 290 PIRSF PIRSF035875 2 290 4.1E-73 T 09-03-2017 IPR017039 Virulence factor BrkB RG43_RS14010 68c10509da07b1f414db29a661c87670 249 Gene3D G3DSA:3.40.50.1360 70 210 1.8E-10 T 09-03-2017 RG43_RS14010 68c10509da07b1f414db29a661c87670 249 SMART SM01134 67 228 1.4E-56 T 09-03-2017 RG43_RS14010 68c10509da07b1f414db29a661c87670 249 Pfam PF08220 DeoR-like helix-turn-helix domain 4 59 8.7E-16 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RG43_RS14010 68c10509da07b1f414db29a661c87670 249 Pfam PF00455 DeoR C terminal sensor domain 69 227 9.8E-46 T 09-03-2017 IPR014036 DeoR C-terminal sensor domain RG43_RS14010 68c10509da07b1f414db29a661c87670 249 SUPERFAMILY SSF100950 67 229 6.84E-29 T 09-03-2017 RG43_RS14010 68c10509da07b1f414db29a661c87670 249 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 22 36 7.7E-5 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RG43_RS14010 68c10509da07b1f414db29a661c87670 249 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 36 54 7.7E-5 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RG43_RS14010 68c10509da07b1f414db29a661c87670 249 SMART SM00420 4 56 2.0E-24 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RG43_RS14010 68c10509da07b1f414db29a661c87670 249 Gene3D G3DSA:1.10.10.10 2 52 1.7E-9 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS14010 68c10509da07b1f414db29a661c87670 249 SUPERFAMILY SSF46785 1 60 3.04E-14 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS14010 68c10509da07b1f414db29a661c87670 249 ProSitePatterns PS00894 DeoR-type HTH domain signature. 4 38 - T 09-03-2017 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 RG43_RS15125 4351f757cf6aee852ca815343ae1137d 194 SUPERFAMILY SSF52972 1 185 6.34E-62 T 09-03-2017 IPR029001 Inosine triphosphate pyrophosphatase-like RG43_RS15125 4351f757cf6aee852ca815343ae1137d 194 Gene3D G3DSA:3.90.950.10 2 187 4.8E-62 T 09-03-2017 IPR029001 Inosine triphosphate pyrophosphatase-like RG43_RS15125 4351f757cf6aee852ca815343ae1137d 194 Hamap MF_00528 Septum formation protein Maf [maf]. 3 191 31.77 T 09-03-2017 IPR003697 Maf-like protein GO:0005737 RG43_RS15125 4351f757cf6aee852ca815343ae1137d 194 PIRSF PIRSF006305 1 193 3.3E-46 T 09-03-2017 IPR003697 Maf-like protein GO:0005737 RG43_RS15125 4351f757cf6aee852ca815343ae1137d 194 Pfam PF02545 Maf-like protein 3 186 5.9E-47 T 09-03-2017 IPR003697 Maf-like protein GO:0005737 RG43_RS15125 4351f757cf6aee852ca815343ae1137d 194 TIGRFAM TIGR00172 maf: septum formation protein Maf 1 185 4.1E-75 T 09-03-2017 IPR003697 Maf-like protein GO:0005737 RG43_RS01820 06bc8aafa080776910698cca6a27fab3 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 09-03-2017 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 RG43_RS01820 06bc8aafa080776910698cca6a27fab3 252 SUPERFAMILY SSF100950 73 233 9.21E-31 T 09-03-2017 RG43_RS01820 06bc8aafa080776910698cca6a27fab3 252 Gene3D G3DSA:3.30.750.70 72 153 3.2E-17 T 09-03-2017 RG43_RS01820 06bc8aafa080776910698cca6a27fab3 252 SUPERFAMILY SSF46785 3 76 1.43E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS01820 06bc8aafa080776910698cca6a27fab3 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 9.8E-14 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RG43_RS01820 06bc8aafa080776910698cca6a27fab3 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 9.8E-14 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RG43_RS01820 06bc8aafa080776910698cca6a27fab3 252 Gene3D G3DSA:1.10.10.10 1 58 3.1E-12 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS01820 06bc8aafa080776910698cca6a27fab3 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 7.8E-26 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RG43_RS01820 06bc8aafa080776910698cca6a27fab3 252 SMART SM00420 6 58 1.0E-28 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RG43_RS01820 06bc8aafa080776910698cca6a27fab3 252 SMART SM01134 72 233 5.1E-74 T 09-03-2017 RG43_RS01820 06bc8aafa080776910698cca6a27fab3 252 Pfam PF00455 DeoR C terminal sensor domain 74 231 8.0E-56 T 09-03-2017 IPR014036 DeoR C-terminal sensor domain RG43_RS11820 6382aa7c3b90190d09b5333e8c177b5d 135 ProSitePatterns PS00893 Nudix box signature. 37 58 - T 09-03-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RG43_RS11820 6382aa7c3b90190d09b5333e8c177b5d 135 SUPERFAMILY SSF55811 1 125 3.25E-36 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 RG43_RS11820 6382aa7c3b90190d09b5333e8c177b5d 135 PRINTS PR00502 NUDIX hydrolase family signature 32 46 6.1E-6 T 09-03-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 RG43_RS11820 6382aa7c3b90190d09b5333e8c177b5d 135 PRINTS PR00502 NUDIX hydrolase family signature 46 61 6.1E-6 T 09-03-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 RG43_RS11820 6382aa7c3b90190d09b5333e8c177b5d 135 Gene3D G3DSA:3.90.79.10 3 127 1.2E-33 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 RG43_RS11820 6382aa7c3b90190d09b5333e8c177b5d 135 Pfam PF00293 NUDIX domain 5 125 1.6E-21 T 09-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 RG43_RS25580 b50989182a1836367eb7e66068aa32c2 188 SUPERFAMILY SSF52218 7 178 2.79E-43 T 09-03-2017 IPR029039 Flavoprotein-like domain RG43_RS25580 b50989182a1836367eb7e66068aa32c2 188 Gene3D G3DSA:3.40.50.360 2 187 5.8E-50 T 09-03-2017 IPR029039 Flavoprotein-like domain RG43_RS25580 b50989182a1836367eb7e66068aa32c2 188 Pfam PF03358 NADPH-dependent FMN reductase 6 148 1.8E-38 T 09-03-2017 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 RG43_RS12145 cd8a0722dfdbce7685542fe991a028bc 254 SMART SM00893 21 211 3.0E-35 T 09-03-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 RG43_RS12145 cd8a0722dfdbce7685542fe991a028bc 254 PIRSF PIRSF000090 1 254 2.0E-62 T 09-03-2017 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105 RG43_RS12145 cd8a0722dfdbce7685542fe991a028bc 254 Pfam PF01012 Electron transfer flavoprotein domain 28 206 2.4E-36 T 09-03-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 RG43_RS12145 cd8a0722dfdbce7685542fe991a028bc 254 SUPERFAMILY SSF52402 1 250 2.37E-54 T 09-03-2017 RG43_RS12145 cd8a0722dfdbce7685542fe991a028bc 254 Gene3D G3DSA:3.40.50.620 1 251 2.8E-63 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS12145 cd8a0722dfdbce7685542fe991a028bc 254 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 09-03-2017 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105 RG43_RS05245 ce6b5fc74a1115cfddac4934b6afddb3 400 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 391 6.3E-136 T 09-03-2017 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 RG43_RS05245 ce6b5fc74a1115cfddac4934b6afddb3 400 Gene3D G3DSA:3.50.50.60 3 182 1.2E-48 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS05245 ce6b5fc74a1115cfddac4934b6afddb3 400 Gene3D G3DSA:3.50.50.60 269 357 1.2E-48 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS05245 ce6b5fc74a1115cfddac4934b6afddb3 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 8.6E-20 T 09-03-2017 RG43_RS05245 ce6b5fc74a1115cfddac4934b6afddb3 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 8.6E-20 T 09-03-2017 RG43_RS05245 ce6b5fc74a1115cfddac4934b6afddb3 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 8.6E-20 T 09-03-2017 RG43_RS05245 ce6b5fc74a1115cfddac4934b6afddb3 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 8.6E-20 T 09-03-2017 RG43_RS05245 ce6b5fc74a1115cfddac4934b6afddb3 400 SUPERFAMILY SSF51905 4 177 8.39E-61 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS05245 ce6b5fc74a1115cfddac4934b6afddb3 400 SUPERFAMILY SSF51905 268 385 8.39E-61 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS05245 ce6b5fc74a1115cfddac4934b6afddb3 400 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 09-03-2017 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 RG43_RS05245 ce6b5fc74a1115cfddac4934b6afddb3 400 Pfam PF01494 FAD binding domain 4 345 6.4E-30 T 09-03-2017 IPR002938 FAD-binding domain GO:0071949 RG43_RS13210 997124ac4b3bf7557ab13112d644325e 514 Gene3D G3DSA:3.30.70.20 236 358 8.2E-78 T 09-03-2017 RG43_RS13210 997124ac4b3bf7557ab13112d644325e 514 Gene3D G3DSA:3.30.70.20 437 466 8.2E-78 T 09-03-2017 RG43_RS13210 997124ac4b3bf7557ab13112d644325e 514 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 493 1.4E-296 T 09-03-2017 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 RG43_RS13210 997124ac4b3bf7557ab13112d644325e 514 Gene3D G3DSA:3.30.70.20 196 235 4.2E-25 T 09-03-2017 RG43_RS13210 997124ac4b3bf7557ab13112d644325e 514 Gene3D G3DSA:1.10.3650.10 359 435 3.9E-31 T 09-03-2017 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 RG43_RS13210 997124ac4b3bf7557ab13112d644325e 514 Gene3D G3DSA:3.30.70.20 10 26 5.9E-12 T 09-03-2017 RG43_RS13210 997124ac4b3bf7557ab13112d644325e 514 Gene3D G3DSA:3.30.70.20 159 195 5.9E-12 T 09-03-2017 RG43_RS13210 997124ac4b3bf7557ab13112d644325e 514 SUPERFAMILY SSF54862 1 503 9.52E-182 T 09-03-2017 RG43_RS13210 997124ac4b3bf7557ab13112d644325e 514 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 358 436 9.9E-30 T 09-03-2017 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 RG43_RS13210 997124ac4b3bf7557ab13112d644325e 514 Pfam PF13247 4Fe-4S dicluster domain 175 271 1.2E-37 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS10715 e4d7c2630d9685bae87c25dce8cdc4da 375 PRINTS PR01007 Flagellar hook-length control protein signature 2 15 8.8E-116 T 09-03-2017 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 RG43_RS10715 e4d7c2630d9685bae87c25dce8cdc4da 375 PRINTS PR01007 Flagellar hook-length control protein signature 117 140 8.8E-116 T 09-03-2017 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 RG43_RS10715 e4d7c2630d9685bae87c25dce8cdc4da 375 PRINTS PR01007 Flagellar hook-length control protein signature 55 71 8.8E-116 T 09-03-2017 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 RG43_RS10715 e4d7c2630d9685bae87c25dce8cdc4da 375 PRINTS PR01007 Flagellar hook-length control protein signature 213 235 8.8E-116 T 09-03-2017 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 RG43_RS10715 e4d7c2630d9685bae87c25dce8cdc4da 375 PRINTS PR01007 Flagellar hook-length control protein signature 20 37 8.8E-116 T 09-03-2017 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 RG43_RS10715 e4d7c2630d9685bae87c25dce8cdc4da 375 PRINTS PR01007 Flagellar hook-length control protein signature 279 294 8.8E-116 T 09-03-2017 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 RG43_RS10715 e4d7c2630d9685bae87c25dce8cdc4da 375 PRINTS PR01007 Flagellar hook-length control protein signature 358 374 8.8E-116 T 09-03-2017 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 RG43_RS10715 e4d7c2630d9685bae87c25dce8cdc4da 375 PRINTS PR01007 Flagellar hook-length control protein signature 261 279 8.8E-116 T 09-03-2017 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 RG43_RS10715 e4d7c2630d9685bae87c25dce8cdc4da 375 PRINTS PR01007 Flagellar hook-length control protein signature 236 258 8.8E-116 T 09-03-2017 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 RG43_RS10715 e4d7c2630d9685bae87c25dce8cdc4da 375 PRINTS PR01007 Flagellar hook-length control protein signature 294 317 8.8E-116 T 09-03-2017 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 RG43_RS10715 e4d7c2630d9685bae87c25dce8cdc4da 375 Pfam PF02120 Flagellar hook-length control protein FliK 250 328 8.4E-20 T 09-03-2017 IPR021136 Flagellar hook-length control protein-like, C-terminal RG43_RS01775 43c9f1106103c9f575e31d345303b499 171 SUPERFAMILY SSF49401 27 171 3.33E-28 T 09-03-2017 IPR008966 Adhesion domain RG43_RS01775 43c9f1106103c9f575e31d345303b499 171 Gene3D G3DSA:2.60.40.1090 25 170 5.9E-31 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS01775 43c9f1106103c9f575e31d345303b499 171 Pfam PF00419 Fimbrial protein 32 170 3.8E-15 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS12680 ba3dc74f48fa2edfcfa472ce207310d8 109 Pfam PF00893 Small Multidrug Resistance protein 6 99 4.0E-29 T 09-03-2017 IPR000390 Small multidrug resistance protein family GO:0016021 RG43_RS12680 ba3dc74f48fa2edfcfa472ce207310d8 109 Hamap MF_01597 Spermidine export protein MdtI [mdtI]. 1 109 34.9 T 09-03-2017 IPR023737 Spermidine export protein MdtI GO:0005886|GO:0015606|GO:0015848 RG43_RS12680 ba3dc74f48fa2edfcfa472ce207310d8 109 SUPERFAMILY SSF103481 12 108 2.09E-17 T 09-03-2017 RG43_RS16805 3b3cbfc7c522cafa3441012805d5055f 247 SMART SM00342 151 233 1.3E-27 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS16805 3b3cbfc7c522cafa3441012805d5055f 247 Gene3D G3DSA:1.10.10.60 187 235 3.2E-14 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS16805 3b3cbfc7c522cafa3441012805d5055f 247 SUPERFAMILY SSF46689 187 235 3.94E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS16805 3b3cbfc7c522cafa3441012805d5055f 247 Pfam PF12833 Helix-turn-helix domain 159 235 4.2E-13 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS16805 3b3cbfc7c522cafa3441012805d5055f 247 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 202 217 1.9E-7 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RG43_RS16805 3b3cbfc7c522cafa3441012805d5055f 247 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 217 233 1.9E-7 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RG43_RS01375 25693a5e29a5a45f62d215fa37d1c90f 141 SUPERFAMILY SSF52833 3 137 5.59E-39 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS01375 25693a5e29a5a45f62d215fa37d1c90f 141 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 116 6.9E-41 T 09-03-2017 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 RG43_RS01375 25693a5e29a5a45f62d215fa37d1c90f 141 Gene3D G3DSA:3.40.30.10 1 140 1.5E-62 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS01375 25693a5e29a5a45f62d215fa37d1c90f 141 Pfam PF03960 ArsC family 7 115 4.6E-19 T 09-03-2017 IPR006660 Arsenate reductase-like RG43_RS09385 20106c7b5a0c546d0f8b07ee75ebb0ed 346 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 130 4.0E-29 T 09-03-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RG43_RS09385 20106c7b5a0c546d0f8b07ee75ebb0ed 346 Gene3D G3DSA:3.90.180.10 2 164 2.8E-45 T 09-03-2017 IPR011032 GroES-like RG43_RS09385 20106c7b5a0c546d0f8b07ee75ebb0ed 346 SMART SM00829 6 344 0.0013 T 09-03-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RG43_RS09385 20106c7b5a0c546d0f8b07ee75ebb0ed 346 Gene3D G3DSA:3.40.50.720 165 286 3.7E-28 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS09385 20106c7b5a0c546d0f8b07ee75ebb0ed 346 SUPERFAMILY SSF51735 138 314 8.97E-30 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS09385 20106c7b5a0c546d0f8b07ee75ebb0ed 346 SUPERFAMILY SSF50129 1 170 2.76E-43 T 09-03-2017 IPR011032 GroES-like RG43_RS09385 20106c7b5a0c546d0f8b07ee75ebb0ed 346 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 09-03-2017 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 RG43_RS09385 20106c7b5a0c546d0f8b07ee75ebb0ed 346 Pfam PF00107 Zinc-binding dehydrogenase 172 305 1.6E-21 T 09-03-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RG43_RS15335 cdc7b9b5999012896afa37c34d4cf2d6 511 SUPERFAMILY SSF74650 23 393 1.79E-165 T 09-03-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 RG43_RS15335 cdc7b9b5999012896afa37c34d4cf2d6 511 SUPERFAMILY SSF81296 397 510 5.32E-34 T 09-03-2017 IPR014756 Immunoglobulin E-set RG43_RS15335 cdc7b9b5999012896afa37c34d4cf2d6 511 Gene3D G3DSA:2.70.98.10 22 395 1.5E-176 T 09-03-2017 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 RG43_RS15335 cdc7b9b5999012896afa37c34d4cf2d6 511 PIRSF PIRSF006281 1 511 1.6E-242 T 09-03-2017 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D RG43_RS15335 cdc7b9b5999012896afa37c34d4cf2d6 511 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 23 507 2.5E-200 T 09-03-2017 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 RG43_RS15335 cdc7b9b5999012896afa37c34d4cf2d6 511 Hamap MF_01069 Glucans biosynthesis protein G [mdoG]. 6 509 63.942 T 09-03-2017 IPR023704 Glucan biosynthesis protein G RG43_RS15335 cdc7b9b5999012896afa37c34d4cf2d6 511 Gene3D G3DSA:2.60.40.10 399 510 1.2E-43 T 09-03-2017 IPR013783 Immunoglobulin-like fold RG43_RS08295 d3380e9e3ca970d9dfbed22064b59906 400 Pfam PF00871 Acetokinase family 6 393 4.5E-178 T 09-03-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RG43_RS08295 d3380e9e3ca970d9dfbed22064b59906 400 Gene3D G3DSA:3.30.420.40 208 398 7.4E-74 T 09-03-2017 RG43_RS08295 d3380e9e3ca970d9dfbed22064b59906 400 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 09-03-2017 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RG43_RS08295 d3380e9e3ca970d9dfbed22064b59906 400 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 206 223 - T 09-03-2017 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RG43_RS08295 d3380e9e3ca970d9dfbed22064b59906 400 SUPERFAMILY SSF53067 4 199 3.17E-63 T 09-03-2017 RG43_RS08295 d3380e9e3ca970d9dfbed22064b59906 400 Hamap MF_00020 Acetate kinase [ackA]. 1 400 185.948 T 09-03-2017 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RG43_RS08295 d3380e9e3ca970d9dfbed22064b59906 400 TIGRFAM TIGR00016 ackA: acetate kinase 1 399 9.7E-188 T 09-03-2017 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RG43_RS08295 d3380e9e3ca970d9dfbed22064b59906 400 PIRSF PIRSF000722 2 400 4.5E-143 T 09-03-2017 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RG43_RS08295 d3380e9e3ca970d9dfbed22064b59906 400 Gene3D G3DSA:3.30.420.40 5 207 7.5E-10 T 09-03-2017 RG43_RS08295 d3380e9e3ca970d9dfbed22064b59906 400 PRINTS PR00471 Acetate kinase family signature 6 17 2.3E-48 T 09-03-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RG43_RS08295 d3380e9e3ca970d9dfbed22064b59906 400 PRINTS PR00471 Acetate kinase family signature 325 341 2.3E-48 T 09-03-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RG43_RS08295 d3380e9e3ca970d9dfbed22064b59906 400 PRINTS PR00471 Acetate kinase family signature 302 315 2.3E-48 T 09-03-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RG43_RS08295 d3380e9e3ca970d9dfbed22064b59906 400 PRINTS PR00471 Acetate kinase family signature 176 189 2.3E-48 T 09-03-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RG43_RS08295 d3380e9e3ca970d9dfbed22064b59906 400 PRINTS PR00471 Acetate kinase family signature 206 227 2.3E-48 T 09-03-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RG43_RS08295 d3380e9e3ca970d9dfbed22064b59906 400 PRINTS PR00471 Acetate kinase family signature 380 392 2.3E-48 T 09-03-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RG43_RS08295 d3380e9e3ca970d9dfbed22064b59906 400 SUPERFAMILY SSF53067 160 398 6.02E-84 T 09-03-2017 RG43_RS23530 8c71b1233cd8a6258c134ad08d75299a 449 SUPERFAMILY SSF55021 297 393 4.91E-17 T 09-03-2017 RG43_RS23530 8c71b1233cd8a6258c134ad08d75299a 449 PIRSF PIRSF000726 2 449 3.2E-167 T 09-03-2017 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 RG43_RS23530 8c71b1233cd8a6258c134ad08d75299a 449 SUPERFAMILY SSF55021 372 448 2.46E-13 T 09-03-2017 RG43_RS23530 8c71b1233cd8a6258c134ad08d75299a 449 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 448 2.0E-139 T 09-03-2017 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 RG43_RS23530 8c71b1233cd8a6258c134ad08d75299a 449 Pfam PF00696 Amino acid kinase family 4 277 8.7E-48 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase RG43_RS23530 8c71b1233cd8a6258c134ad08d75299a 449 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 3 448 3.0E-153 T 09-03-2017 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 RG43_RS23530 8c71b1233cd8a6258c134ad08d75299a 449 ProSitePatterns PS00324 Aspartokinase signature. 6 14 - T 09-03-2017 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 RG43_RS23530 8c71b1233cd8a6258c134ad08d75299a 449 SUPERFAMILY SSF53633 4 292 5.37E-76 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase RG43_RS23530 8c71b1233cd8a6258c134ad08d75299a 449 Gene3D G3DSA:3.40.1160.10 3 53 3.8E-60 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase RG43_RS23530 8c71b1233cd8a6258c134ad08d75299a 449 Gene3D G3DSA:3.40.1160.10 106 294 3.8E-60 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase RG43_RS08530 b29b2666fba21a543f05308b3e77f103 180 Gene3D G3DSA:1.10.10.10 5 76 5.2E-13 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS08530 b29b2666fba21a543f05308b3e77f103 180 SUPERFAMILY SSF55781 72 177 5.69E-20 T 09-03-2017 IPR029016 GAF domain-like RG43_RS08530 b29b2666fba21a543f05308b3e77f103 180 Gene3D G3DSA:3.30.450.40 77 164 4.0E-28 T 09-03-2017 IPR029016 GAF domain-like RG43_RS08530 b29b2666fba21a543f05308b3e77f103 180 SMART SM00346 7 95 2.5E-33 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RG43_RS08530 b29b2666fba21a543f05308b3e77f103 180 SUPERFAMILY SSF46785 7 79 1.05E-10 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS08530 b29b2666fba21a543f05308b3e77f103 180 Pfam PF01614 Bacterial transcriptional regulator 122 165 1.6E-8 T 09-03-2017 IPR014757 Transcription regulator IclR, C-terminal RG43_RS08530 b29b2666fba21a543f05308b3e77f103 180 Pfam PF09339 IclR helix-turn-helix domain 9 58 9.0E-9 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RG43_RS13560 ad0e563a26fbe3cdaf0c9db8681fccf8 201 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 94 6.4E-10 T 09-03-2017 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RG43_RS17665 18996d74e9f7974ba9a0c0df17913d89 546 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 482 538 3.7E-8 T 09-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS17665 18996d74e9f7974ba9a0c0df17913d89 546 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 09-03-2017 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS17665 18996d74e9f7974ba9a0c0df17913d89 546 Gene3D G3DSA:3.40.120.10 30 225 1.1E-59 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS17665 18996d74e9f7974ba9a0c0df17913d89 546 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 544 0.0 T 09-03-2017 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|MetaCyc: PWY-7343 RG43_RS17665 18996d74e9f7974ba9a0c0df17913d89 546 SUPERFAMILY SSF53738 305 446 2.24E-32 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS17665 18996d74e9f7974ba9a0c0df17913d89 546 SUPERFAMILY SSF53738 209 317 6.59E-8 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS17665 18996d74e9f7974ba9a0c0df17913d89 546 Gene3D G3DSA:3.40.120.10 226 316 9.4E-45 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS17665 18996d74e9f7974ba9a0c0df17913d89 546 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 2.3E-19 T 09-03-2017 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS17665 18996d74e9f7974ba9a0c0df17913d89 546 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 440 6.2E-31 T 09-03-2017 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS17665 18996d74e9f7974ba9a0c0df17913d89 546 Gene3D G3DSA:3.30.310.50 466 545 9.9E-31 T 09-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS17665 18996d74e9f7974ba9a0c0df17913d89 546 SUPERFAMILY SSF55957 433 544 5.93E-20 T 09-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS17665 18996d74e9f7974ba9a0c0df17913d89 546 SUPERFAMILY SSF53738 26 235 2.19E-48 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS17665 18996d74e9f7974ba9a0c0df17913d89 546 Gene3D G3DSA:3.40.120.10 318 441 1.0E-35 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS17665 18996d74e9f7974ba9a0c0df17913d89 546 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 180 4.2E-35 T 09-03-2017 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS20540 08bd307c681e8d777064b9a1e5756d4e 140 Gene3D G3DSA:3.30.160.200 3 107 6.9E-34 T 09-03-2017 RG43_RS20540 08bd307c681e8d777064b9a1e5756d4e 140 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 09-03-2017 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RG43_RS20540 08bd307c681e8d777064b9a1e5756d4e 140 SUPERFAMILY SSF75620 7 109 1.92E-14 T 09-03-2017 RG43_RS20540 08bd307c681e8d777064b9a1e5756d4e 140 Pfam PF00472 RF-1 domain 6 132 2.4E-27 T 09-03-2017 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RG43_RS09255 e9e1ffc547719739a70b876013e0a15e 1269 Pfam PF13569 Domain of unknown function (DUF4132) 1003 1186 1.9E-46 T 09-03-2017 IPR025406 Domain of unknown function DUF4132 RG43_RS09255 e9e1ffc547719739a70b876013e0a15e 1269 Gene3D G3DSA:2.20.140.10 1 71 1.0E-31 T 09-03-2017 IPR008893 WGR domain RG43_RS09255 e9e1ffc547719739a70b876013e0a15e 1269 Pfam PF05406 WGR domain 6 69 1.6E-17 T 09-03-2017 IPR008893 WGR domain RG43_RS09255 e9e1ffc547719739a70b876013e0a15e 1269 SMART SM00773 1 71 6.9E-19 T 09-03-2017 IPR008893 WGR domain RG43_RS09255 e9e1ffc547719739a70b876013e0a15e 1269 SUPERFAMILY SSF142921 12 66 1.26E-9 T 09-03-2017 IPR008893 WGR domain RG43_RS20920 8ebca0738a83e782708c9b4b890d1b23 172 Pfam PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) 81 163 5.6E-8 T 09-03-2017 IPR019114 Chaperone lipoprotein, PulS/OutS-like RG43_RS20920 8ebca0738a83e782708c9b4b890d1b23 172 ProDom PD074041 YACC EXPORTED PRECURSOR SIGNAL PERIPLASMIC Y0776 SIMILAR ECS0126 STY0189 ESCHERICHIA 58 172 3.0E-63 T 09-03-2017 RG43_RS18560 a464b6381bd664394d30d251e50b76e7 100 SUPERFAMILY SSF143011 9 98 1.57E-14 T 09-03-2017 RG43_RS18560 a464b6381bd664394d30d251e50b76e7 100 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 9 98 8.0E-30 T 09-03-2017 IPR007711 Toxin HigB-1 RG43_RS16140 60feb0dfbdfa96c198c39b45781a4348 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 6.2E-23 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RG43_RS16140 60feb0dfbdfa96c198c39b45781a4348 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 6.2E-23 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RG43_RS16140 60feb0dfbdfa96c198c39b45781a4348 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 6.2E-23 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RG43_RS16140 60feb0dfbdfa96c198c39b45781a4348 164 SUPERFAMILY SSF54909 74 157 4.16E-22 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel RG43_RS16140 60feb0dfbdfa96c198c39b45781a4348 164 SUPERFAMILY SSF46785 12 70 4.01E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS16140 60feb0dfbdfa96c198c39b45781a4348 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 1.1E-24 T 09-03-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RG43_RS16140 60feb0dfbdfa96c198c39b45781a4348 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 09-03-2017 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RG43_RS16140 60feb0dfbdfa96c198c39b45781a4348 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 2.7E-21 T 09-03-2017 RG43_RS16140 60feb0dfbdfa96c198c39b45781a4348 164 Gene3D G3DSA:1.10.10.10 13 64 1.0E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS16140 60feb0dfbdfa96c198c39b45781a4348 164 SMART SM00344 12 121 3.5E-55 T 09-03-2017 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 RG43_RS16140 60feb0dfbdfa96c198c39b45781a4348 164 Gene3D G3DSA:3.30.70.920 65 161 2.3E-33 T 09-03-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RG43_RS12995 03efd737c871fc20cbbc86944eeb36ee 438 Pfam PF13657 HipA N-terminal domain 7 103 8.8E-25 T 09-03-2017 IPR017508 HipA, N-terminal subdomain 1 RG43_RS12995 03efd737c871fc20cbbc86944eeb36ee 438 Pfam PF07805 HipA-like N-terminal domain 150 238 3.5E-19 T 09-03-2017 IPR012894 HipA, N-terminal subdomain 2 RG43_RS12995 03efd737c871fc20cbbc86944eeb36ee 438 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 4 103 2.0E-30 T 09-03-2017 IPR017508 HipA, N-terminal subdomain 1 RG43_RS12995 03efd737c871fc20cbbc86944eeb36ee 438 Pfam PF07804 HipA-like C-terminal domain 249 403 5.4E-30 T 09-03-2017 IPR012893 HipA-like, C-terminal RG43_RS18590 f7704e69ca361ae10795216cea640d95 558 Pfam PF00999 Sodium/hydrogen exchanger family 13 384 1.2E-76 T 09-03-2017 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 RG43_RS18590 f7704e69ca361ae10795216cea640d95 558 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 15 294 6.9E-77 T 09-03-2017 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 RG43_RS18590 f7704e69ca361ae10795216cea640d95 558 Pfam PF02254 TrkA-N domain 421 534 3.6E-25 T 09-03-2017 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 RG43_RS18590 f7704e69ca361ae10795216cea640d95 558 Gene3D G3DSA:3.40.50.720 414 548 2.9E-39 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS18590 f7704e69ca361ae10795216cea640d95 558 SUPERFAMILY SSF51735 418 549 2.63E-29 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS13070 7c0cfb02f5b28615f04ca89939982eee 253 SUPERFAMILY SSF46689 186 235 1.52E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS13070 7c0cfb02f5b28615f04ca89939982eee 253 Pfam PF12833 Helix-turn-helix domain 157 230 1.1E-14 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS13070 7c0cfb02f5b28615f04ca89939982eee 253 SMART SM00342 150 231 1.8E-28 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS13070 7c0cfb02f5b28615f04ca89939982eee 253 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 215 231 9.9E-6 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RG43_RS13070 7c0cfb02f5b28615f04ca89939982eee 253 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 200 215 9.9E-6 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RG43_RS13070 7c0cfb02f5b28615f04ca89939982eee 253 Gene3D G3DSA:1.10.10.60 186 233 5.0E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS13070 7c0cfb02f5b28615f04ca89939982eee 253 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 186 227 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RG43_RS18770 d0ef553e5d2c8cb69946942eae828262 231 Pfam PF06508 Queuosine biosynthesis protein QueC 3 213 3.7E-85 T 09-03-2017 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 RG43_RS18770 d0ef553e5d2c8cb69946942eae828262 231 Gene3D G3DSA:3.40.50.620 1 222 1.0E-86 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS18770 d0ef553e5d2c8cb69946942eae828262 231 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 206 3.9E-89 T 09-03-2017 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 RG43_RS18770 d0ef553e5d2c8cb69946942eae828262 231 SUPERFAMILY SSF52402 1 221 9.48E-72 T 09-03-2017 RG43_RS18770 d0ef553e5d2c8cb69946942eae828262 231 PIRSF PIRSF006293 1 226 1.1E-88 T 09-03-2017 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 RG43_RS18770 d0ef553e5d2c8cb69946942eae828262 231 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 219 53.608 T 09-03-2017 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 RG43_RS16155 808aaf8bc801eeed2e439c0c51a2a730 588 Gene3D G3DSA:3.40.50.300 349 572 3.8E-59 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16155 808aaf8bc801eeed2e439c0c51a2a730 588 Pfam PF00005 ABC transporter 369 513 1.1E-27 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS16155 808aaf8bc801eeed2e439c0c51a2a730 588 Pfam PF00664 ABC transporter transmembrane region 26 291 2.9E-49 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RG43_RS16155 808aaf8bc801eeed2e439c0c51a2a730 588 SUPERFAMILY SSF52540 348 582 1.55E-61 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16155 808aaf8bc801eeed2e439c0c51a2a730 588 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 21 556 8.0E-189 T 09-03-2017 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 RG43_RS16155 808aaf8bc801eeed2e439c0c51a2a730 588 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS16155 808aaf8bc801eeed2e439c0c51a2a730 588 SUPERFAMILY SSF90123 11 331 3.14E-54 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RG43_RS16155 808aaf8bc801eeed2e439c0c51a2a730 588 Gene3D G3DSA:1.20.1560.10 21 335 2.5E-45 T 09-03-2017 RG43_RS16155 808aaf8bc801eeed2e439c0c51a2a730 588 SMART SM00382 375 560 4.1E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS15490 eb9b9a05110a11a2cf9ed5fbe3e01cdb 212 SUPERFAMILY SSF48498 87 212 6.47E-42 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RG43_RS15490 eb9b9a05110a11a2cf9ed5fbe3e01cdb 212 Gene3D G3DSA:1.10.357.10 79 212 1.8E-59 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RG43_RS15490 eb9b9a05110a11a2cf9ed5fbe3e01cdb 212 Pfam PF08362 YcdC-like protein, C-terminal region 70 212 5.7E-59 T 09-03-2017 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 RG43_RS15490 eb9b9a05110a11a2cf9ed5fbe3e01cdb 212 SUPERFAMILY SSF46689 13 90 1.25E-19 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS15490 eb9b9a05110a11a2cf9ed5fbe3e01cdb 212 Gene3D G3DSA:1.10.10.60 10 52 2.0E-15 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS15490 eb9b9a05110a11a2cf9ed5fbe3e01cdb 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 1.6E-8 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RG43_RS15490 eb9b9a05110a11a2cf9ed5fbe3e01cdb 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 1.6E-8 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RG43_RS15490 eb9b9a05110a11a2cf9ed5fbe3e01cdb 212 TIGRFAM TIGR03613 RutR: pyrimidine utilization regulatory protein R 11 212 1.5E-116 T 09-03-2017 IPR019915 Transcription regulator, pyrimidine utilisation, RutR RG43_RS15490 eb9b9a05110a11a2cf9ed5fbe3e01cdb 212 Gene3D G3DSA:1.10.10.60 53 78 7.4E-8 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS15490 eb9b9a05110a11a2cf9ed5fbe3e01cdb 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 69 6.2E-15 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RG43_RS11565 b09db2016e29871577ffbad62439433f 532 Pfam PF00563 EAL domain 272 501 1.5E-58 T 09-03-2017 IPR001633 EAL domain RG43_RS11565 b09db2016e29871577ffbad62439433f 532 Gene3D G3DSA:3.20.20.450 271 513 1.1E-72 T 09-03-2017 IPR001633 EAL domain RG43_RS11565 b09db2016e29871577ffbad62439433f 532 SUPERFAMILY SSF141868 272 515 1.24E-71 T 09-03-2017 IPR001633 EAL domain RG43_RS11565 b09db2016e29871577ffbad62439433f 532 SMART SM00052 265 506 4.8E-112 T 09-03-2017 IPR001633 EAL domain RG43_RS11565 b09db2016e29871577ffbad62439433f 532 Pfam PF12792 CSS motif domain associated with EAL 43 239 6.0E-39 T 09-03-2017 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain RG43_RS07800 ce7477f1c88546bc57eb146c3ac5b6c1 321 Gene3D G3DSA:3.40.367.20 100 299 1.9E-78 T 09-03-2017 RG43_RS07800 ce7477f1c88546bc57eb146c3ac5b6c1 321 SUPERFAMILY SSF53067 4 318 2.68E-64 T 09-03-2017 RG43_RS07800 ce7477f1c88546bc57eb146c3ac5b6c1 321 TIGRFAM TIGR00749 glk: glucokinase 6 310 3.6E-156 T 09-03-2017 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 RG43_RS07800 ce7477f1c88546bc57eb146c3ac5b6c1 321 Hamap MF_00524 Glucokinase [glk]. 2 316 40.249 T 09-03-2017 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 RG43_RS07800 ce7477f1c88546bc57eb146c3ac5b6c1 321 Pfam PF02685 Glucokinase 6 315 1.7E-123 T 09-03-2017 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 RG43_RS20710 df79724ff3234761053fa22f4829981b 505 Gene3D G3DSA:1.10.3210.10 4 122 1.1E-71 T 09-03-2017 IPR006674 HD domain RG43_RS20710 df79724ff3234761053fa22f4829981b 505 Gene3D G3DSA:1.10.3210.10 183 268 1.1E-71 T 09-03-2017 IPR006674 HD domain RG43_RS20710 df79724ff3234761053fa22f4829981b 505 SUPERFAMILY SSF109604 251 432 9.42E-68 T 09-03-2017 RG43_RS20710 df79724ff3234761053fa22f4829981b 505 SUPERFAMILY SSF109604 31 134 9.42E-68 T 09-03-2017 RG43_RS20710 df79724ff3234761053fa22f4829981b 505 SUPERFAMILY SSF109604 182 215 9.42E-68 T 09-03-2017 RG43_RS20710 df79724ff3234761053fa22f4829981b 505 SUPERFAMILY SSF109604 483 501 9.42E-68 T 09-03-2017 RG43_RS20710 df79724ff3234761053fa22f4829981b 505 Hamap MF_00030 Deoxyguanosinetriphosphate triphosphohydrolase [dgt]. 1 504 51.408 T 09-03-2017 IPR020779 Deoxyguanosinetriphosphate triphosphohydrolase, proteobacteria GO:0000287|GO:0006203|GO:0008832 KEGG: 00230+3.1.5.1 RG43_RS20710 df79724ff3234761053fa22f4829981b 505 Gene3D G3DSA:1.10.3410.10 269 390 3.6E-34 T 09-03-2017 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain RG43_RS20710 df79724ff3234761053fa22f4829981b 505 Gene3D G3DSA:1.10.3550.10 123 158 1.8E-32 T 09-03-2017 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain RG43_RS20710 df79724ff3234761053fa22f4829981b 505 Gene3D G3DSA:1.10.3550.10 391 503 1.8E-32 T 09-03-2017 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain RG43_RS20710 df79724ff3234761053fa22f4829981b 505 Pfam PF01966 HD domain 66 146 2.0E-10 T 09-03-2017 IPR006674 HD domain RG43_RS20710 df79724ff3234761053fa22f4829981b 505 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 30 502 7.8E-150 T 09-03-2017 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 RG43_RS20710 df79724ff3234761053fa22f4829981b 505 SMART SM00471 62 282 2.4E-11 T 09-03-2017 IPR003607 HD/PDEase domain RG43_RS10555 3fac992aa185ec428b9aa33ff8082cbd 223 SUPERFAMILY SSF46894 117 219 1.7E-27 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RG43_RS10555 3fac992aa185ec428b9aa33ff8082cbd 223 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 218 3.4E-115 T 09-03-2017 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 RG43_RS10555 3fac992aa185ec428b9aa33ff8082cbd 223 Gene3D G3DSA:3.40.50.2300 1 120 9.5E-39 T 09-03-2017 RG43_RS10555 3fac992aa185ec428b9aa33ff8082cbd 223 SMART SM00448 1 111 1.6E-42 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS10555 3fac992aa185ec428b9aa33ff8082cbd 223 Gene3D G3DSA:1.10.10.10 122 219 4.8E-29 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS10555 3fac992aa185ec428b9aa33ff8082cbd 223 SUPERFAMILY SSF52172 1 125 3.7E-39 T 09-03-2017 IPR011006 CheY-like superfamily RG43_RS10555 3fac992aa185ec428b9aa33ff8082cbd 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 218 1.9E-24 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RG43_RS10555 3fac992aa185ec428b9aa33ff8082cbd 223 SMART SM00862 143 218 4.4E-23 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RG43_RS10555 3fac992aa185ec428b9aa33ff8082cbd 223 Pfam PF00072 Response regulator receiver domain 3 112 1.8E-26 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS19190 46c2fde208ad87ced460e7bdac7e5013 257 PIRSF PIRSF007027 1 257 5.4E-162 T 09-03-2017 IPR016504 Uncharacterised conserved protein UCP007027 RG43_RS19190 46c2fde208ad87ced460e7bdac7e5013 257 TIGRFAM TIGR04390 OMP_YaiO_dom: outer membrane protein, YaiO family 22 257 2.3E-54 T 09-03-2017 IPR030887 YaiO family, OMP domain RG43_RS00490 00a2e230767a7aebb667ea11577dad4b 207 SUPERFAMILY SSF52540 3 189 4.01E-72 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS00490 00a2e230767a7aebb667ea11577dad4b 207 SMART SM00072 3 187 3.6E-89 T 09-03-2017 IPR008145 Guanylate kinase/L-type calcium channel beta subunit RG43_RS00490 00a2e230767a7aebb667ea11577dad4b 207 Gene3D G3DSA:3.40.50.300 18 43 3.3E-5 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS00490 00a2e230767a7aebb667ea11577dad4b 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 38.554 T 09-03-2017 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 RG43_RS00490 00a2e230767a7aebb667ea11577dad4b 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 9.6E-77 T 09-03-2017 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 RG43_RS00490 00a2e230767a7aebb667ea11577dad4b 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 09-03-2017 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 RG43_RS00490 00a2e230767a7aebb667ea11577dad4b 207 Pfam PF00625 Guanylate kinase 5 186 1.2E-71 T 09-03-2017 IPR008145 Guanylate kinase/L-type calcium channel beta subunit RG43_RS00490 00a2e230767a7aebb667ea11577dad4b 207 Gene3D G3DSA:3.40.50.300 88 204 2.8E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS00490 00a2e230767a7aebb667ea11577dad4b 207 Gene3D G3DSA:3.40.50.300 1 17 2.8E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS00490 00a2e230767a7aebb667ea11577dad4b 207 Gene3D G3DSA:3.30.63.10 44 87 1.7E-30 T 09-03-2017 RG43_RS12235 b3e0ec9dedda2bfa020a335b06f52759 423 SUPERFAMILY SSF101960 11 420 5.62E-115 T 09-03-2017 RG43_RS12235 b3e0ec9dedda2bfa020a335b06f52759 423 Pfam PF01458 Uncharacterized protein family (UPF0051) 170 393 3.8E-69 T 09-03-2017 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 RG43_RS12235 b3e0ec9dedda2bfa020a335b06f52759 423 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 132 409 5.6E-90 T 09-03-2017 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 RG43_RS04480 0f0ce55d4fa062187d7dd41b2c1598f7 140 ProDom PD054142 YEEW L0008-LIKE GENOME ECS4540 C4577 AEC77 ECS1407 Z5092 C1289 L0008 5 66 8.0E-29 T 09-03-2017 RG43_RS04480 0f0ce55d4fa062187d7dd41b2c1598f7 140 Pfam PF06117 Enterobacterial protein of unknown function (DUF957) 79 140 1.7E-40 T 09-03-2017 IPR009301 Protein of unknown function DUF957 RG43_RS26855 0f0ce55d4fa062187d7dd41b2c1598f7 140 ProDom PD054142 YEEW L0008-LIKE GENOME ECS4540 C4577 AEC77 ECS1407 Z5092 C1289 L0008 5 66 8.0E-29 T 09-03-2017 RG43_RS26855 0f0ce55d4fa062187d7dd41b2c1598f7 140 Pfam PF06117 Enterobacterial protein of unknown function (DUF957) 79 140 1.7E-40 T 09-03-2017 IPR009301 Protein of unknown function DUF957 RG43_RS05965 f6c8caf29b96a49a407673dbe2661141 492 SUPERFAMILY SSF53067 4 216 2.59E-37 T 09-03-2017 RG43_RS05965 f6c8caf29b96a49a407673dbe2661141 492 SUPERFAMILY SSF53067 218 455 2.19E-43 T 09-03-2017 RG43_RS05965 f6c8caf29b96a49a407673dbe2661141 492 Gene3D G3DSA:3.30.420.40 1 117 1.6E-22 T 09-03-2017 RG43_RS05965 f6c8caf29b96a49a407673dbe2661141 492 Gene3D G3DSA:3.30.420.40 120 217 2.2E-13 T 09-03-2017 RG43_RS05965 f6c8caf29b96a49a407673dbe2661141 492 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 225 418 5.3E-23 T 09-03-2017 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 RG43_RS05965 f6c8caf29b96a49a407673dbe2661141 492 Gene3D G3DSA:3.30.420.40 220 465 2.0E-41 T 09-03-2017 RG43_RS05965 f6c8caf29b96a49a407673dbe2661141 492 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 121 216 8.1E-7 T 09-03-2017 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 RG43_RS05965 f6c8caf29b96a49a407673dbe2661141 492 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 110 4.9E-12 T 09-03-2017 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 RG43_RS16135 5bb2de7cdaeeb3e9a9549a6007cbbb6f 1355 SUPERFAMILY SSF46785 1289 1352 4.72E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS16135 5bb2de7cdaeeb3e9a9549a6007cbbb6f 1355 SMART SM00843 1288 1353 4.4E-42 T 09-03-2017 IPR018541 FtsK gamma domain RG43_RS16135 5bb2de7cdaeeb3e9a9549a6007cbbb6f 1355 Pfam PF09397 Ftsk gamma domain 1290 1350 2.0E-28 T 09-03-2017 IPR018541 FtsK gamma domain RG43_RS16135 5bb2de7cdaeeb3e9a9549a6007cbbb6f 1355 Pfam PF01580 FtsK/SpoIIIE family 974 1187 1.7E-76 T 09-03-2017 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 RG43_RS16135 5bb2de7cdaeeb3e9a9549a6007cbbb6f 1355 SUPERFAMILY SSF52540 948 1260 5.65E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16135 5bb2de7cdaeeb3e9a9549a6007cbbb6f 1355 Gene3D G3DSA:3.40.50.300 948 1254 1.1E-98 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16135 5bb2de7cdaeeb3e9a9549a6007cbbb6f 1355 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 20 191 9.7E-42 T 09-03-2017 IPR025199 DNA translocase FtsK, 4TM region RG43_RS14015 56f79aae5057c73d4c2beb937bad2deb 72 Pfam PF05433 Glycine zipper 2TM domain 34 71 7.6E-8 T 09-03-2017 IPR008816 Glycine zipper 2TM domain GO:0019867 RG43_RS14015 56f79aae5057c73d4c2beb937bad2deb 72 ProDom PD052686 LIPOPROTEIN INDUCIBLE OSMOTICALLY B PRECURSOR SIGNAL MEMBRANE PALMITATE TRANSMEMBRANE SURFACE 12 34 2.0E-6 T 09-03-2017 RG43_RS24805 b6cb369f06acaecc00322377c74e9f11 233 SUPERFAMILY SSF52343 100 231 2.88E-36 T 09-03-2017 RG43_RS24805 b6cb369f06acaecc00322377c74e9f11 233 Pfam PF00970 Oxidoreductase FAD-binding domain 6 95 5.3E-7 T 09-03-2017 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 RG43_RS24805 b6cb369f06acaecc00322377c74e9f11 233 Pfam PF00175 Oxidoreductase NAD-binding domain 108 211 5.5E-23 T 09-03-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 RG43_RS24805 b6cb369f06acaecc00322377c74e9f11 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 31 43 1.1E-13 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 RG43_RS24805 b6cb369f06acaecc00322377c74e9f11 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 107 126 1.1E-13 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 RG43_RS24805 b6cb369f06acaecc00322377c74e9f11 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 47 54 1.1E-13 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 RG43_RS24805 b6cb369f06acaecc00322377c74e9f11 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 91 100 1.1E-13 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 RG43_RS24805 b6cb369f06acaecc00322377c74e9f11 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 141 1.1E-13 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 RG43_RS24805 b6cb369f06acaecc00322377c74e9f11 233 SUPERFAMILY SSF63380 3 97 4.12E-23 T 09-03-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RG43_RS24805 b6cb369f06acaecc00322377c74e9f11 233 Gene3D G3DSA:2.40.30.10 3 98 1.9E-30 T 09-03-2017 RG43_RS24805 b6cb369f06acaecc00322377c74e9f11 233 Gene3D G3DSA:3.40.50.80 100 231 4.2E-39 T 09-03-2017 RG43_RS02290 d0e2edf287b326d3029e5208b27c0417 153 Pfam PF04612 Type II secretion system (T2SS), protein M 2 150 7.7E-32 T 09-03-2017 IPR007690 Type II secretion system, protein M GO:0006858 RG43_RS02290 d0e2edf287b326d3029e5208b27c0417 153 SUPERFAMILY SSF103054 76 139 7.45E-5 T 09-03-2017 IPR023229 Type II secretion system protein M, periplasmic domain RG43_RS07505 9f477cb4a9f10632a1703a6cfb27f084 278 SUPERFAMILY SSF53067 141 260 1.05E-21 T 09-03-2017 RG43_RS07505 9f477cb4a9f10632a1703a6cfb27f084 278 SUPERFAMILY SSF53067 31 131 1.59E-8 T 09-03-2017 RG43_RS07505 9f477cb4a9f10632a1703a6cfb27f084 278 Gene3D G3DSA:3.30.420.40 13 147 1.7E-21 T 09-03-2017 RG43_RS07505 9f477cb4a9f10632a1703a6cfb27f084 278 TIGRFAM TIGR02529 EutJ: ethanolamine utilization protein EutJ family protein 33 267 7.6E-111 T 09-03-2017 IPR013366 Ethanolamine utilisation EutJ RG43_RS07505 9f477cb4a9f10632a1703a6cfb27f084 278 Pfam PF14450 Cell division protein FtsA 141 246 1.3E-9 T 09-03-2017 RG43_RS07505 9f477cb4a9f10632a1703a6cfb27f084 278 Gene3D G3DSA:3.30.420.40 148 246 3.3E-35 T 09-03-2017 RG43_RS13195 dd07a2f6524247e46c0e3b2ec59cf346 293 SUPERFAMILY SSF103481 191 291 4.45E-6 T 09-03-2017 RG43_RS13195 dd07a2f6524247e46c0e3b2ec59cf346 293 Pfam PF00892 EamA-like transporter family 6 137 1.1E-7 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 RG43_RS13195 dd07a2f6524247e46c0e3b2ec59cf346 293 Pfam PF00892 EamA-like transporter family 158 285 4.2E-8 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 RG43_RS13195 dd07a2f6524247e46c0e3b2ec59cf346 293 SUPERFAMILY SSF103481 48 140 7.85E-6 T 09-03-2017 RG43_RS14105 de283e1980383a2fa8b7083e129cd080 196 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 3 21 1.7E-6 T 09-03-2017 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 RG43_RS14105 de283e1980383a2fa8b7083e129cd080 196 Gene3D G3DSA:3.40.50.300 3 196 1.7E-78 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS14105 de283e1980383a2fa8b7083e129cd080 196 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 24 196 1.7E-85 T 09-03-2017 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 RG43_RS14105 de283e1980383a2fa8b7083e129cd080 196 SUPERFAMILY SSF52540 7 196 9.14E-78 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS14105 de283e1980383a2fa8b7083e129cd080 196 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 28 196 5.8E-61 T 09-03-2017 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 RG43_RS14105 de283e1980383a2fa8b7083e129cd080 196 PIRSF PIRSF015617 1 196 3.9E-70 T 09-03-2017 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 RG43_RS02180 7033524c6835105f1e9a884500a6b723 72 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 26.528 T 09-03-2017 IPR010648 Uncharacterised protein family UPF0270 RG43_RS02180 7033524c6835105f1e9a884500a6b723 72 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 67 6.0E-30 T 09-03-2017 IPR010648 Uncharacterised protein family UPF0270 RG43_RS02180 7033524c6835105f1e9a884500a6b723 72 PIRSF PIRSF006169 1 72 6.5E-38 T 09-03-2017 IPR010648 Uncharacterised protein family UPF0270 RG43_RS02180 7033524c6835105f1e9a884500a6b723 72 SUPERFAMILY SSF118001 1 71 1.07E-29 T 09-03-2017 IPR010648 Uncharacterised protein family UPF0270 RG43_RS02180 7033524c6835105f1e9a884500a6b723 72 Gene3D G3DSA:1.10.10.610 1 72 6.9E-39 T 09-03-2017 IPR010648 Uncharacterised protein family UPF0270 RG43_RS02180 7033524c6835105f1e9a884500a6b723 72 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 69 5.0E-36 T 09-03-2017 IPR010648 Uncharacterised protein family UPF0270 RG43_RS08895 e308e3496f6ed61fb59ce76f39976962 341 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 9 46 7.0E-6 T 09-03-2017 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RG43_RS08895 e308e3496f6ed61fb59ce76f39976962 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 158 338 4.4E-28 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS08895 e308e3496f6ed61fb59ce76f39976962 341 SUPERFAMILY SSF161098 135 321 2.22E-18 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS08895 e308e3496f6ed61fb59ce76f39976962 341 Gene3D G3DSA:1.10.3720.10 134 337 3.0E-17 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS11825 a4209d12c0489e3e9f0d9bcd17e638af 206 Pfam PF01066 CDP-alcohol phosphatidyltransferase 26 89 1.1E-9 T 09-03-2017 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RG43_RS11825 a4209d12c0489e3e9f0d9bcd17e638af 206 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 89 - T 09-03-2017 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RG43_RS12935 502d7bdd9547bf62c639904edd26a481 252 Gene3D G3DSA:1.10.150.290 134 230 1.5E-30 T 09-03-2017 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 RG43_RS12935 502d7bdd9547bf62c639904edd26a481 252 Gene3D G3DSA:3.40.50.150 20 133 3.1E-20 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS12935 502d7bdd9547bf62c639904edd26a481 252 SUPERFAMILY SSF53335 22 239 1.08E-34 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS12935 502d7bdd9547bf62c639904edd26a481 252 Pfam PF13649 Methyltransferase domain 35 124 6.8E-16 T 09-03-2017 RG43_RS12935 502d7bdd9547bf62c639904edd26a481 252 Hamap MF_00560 Trans-aconitate 2-methyltransferase [tam]. 2 251 47.966 T 09-03-2017 IPR023506 Trans-aconitate 2-methyltransferase GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 RG43_RS25190 1a37b7f57f0cf4cce9711d7feab7ef52 224 Hamap MF_02027 dTDP-fucosamine acetyltransferase [wecD]. 44 224 43.703 T 09-03-2017 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 KEGG: 00071+2.3.1.21|MetaCyc: PWY-6111|MetaCyc: PWY-7315 RG43_RS25190 1a37b7f57f0cf4cce9711d7feab7ef52 224 SUPERFAMILY SSF55729 43 218 3.37E-17 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS25190 1a37b7f57f0cf4cce9711d7feab7ef52 224 Gene3D G3DSA:3.40.630.30 88 218 5.1E-14 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS25190 1a37b7f57f0cf4cce9711d7feab7ef52 224 TIGRFAM TIGR02382 wecD_rffC: TDP-D-fucosamine acetyltransferase 44 224 9.4E-98 T 09-03-2017 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 KEGG: 00071+2.3.1.21|MetaCyc: PWY-6111|MetaCyc: PWY-7315 RG43_RS12240 20d41c5b70938a8a981222f6dfcc8995 406 Hamap MF_01831 Cysteine desulfurase [sufS]. 1 406 76.744 T 09-03-2017 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 RG43_RS12240 20d41c5b70938a8a981222f6dfcc8995 406 Gene3D G3DSA:3.90.1150.10 285 400 1.2E-26 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RG43_RS12240 20d41c5b70938a8a981222f6dfcc8995 406 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 7 405 2.6E-188 T 09-03-2017 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 RG43_RS12240 20d41c5b70938a8a981222f6dfcc8995 406 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 217 236 - T 09-03-2017 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site RG43_RS12240 20d41c5b70938a8a981222f6dfcc8995 406 Gene3D G3DSA:3.40.640.10 36 284 4.3E-87 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS12240 20d41c5b70938a8a981222f6dfcc8995 406 SUPERFAMILY SSF53383 4 402 4.35E-129 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS12240 20d41c5b70938a8a981222f6dfcc8995 406 Pfam PF00266 Aminotransferase class-V 26 394 2.2E-157 T 09-03-2017 IPR000192 Aminotransferase class V domain RG43_RS00405 ea52908e895bf4bf0694dfb5cefb1a5f 460 SUPERFAMILY SSF103473 13 426 6.41E-31 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS00405 ea52908e895bf4bf0694dfb5cefb1a5f 460 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 11 444 1.5E-156 T 09-03-2017 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 RG43_RS00405 ea52908e895bf4bf0694dfb5cefb1a5f 460 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 62 87 - T 09-03-2017 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 RG43_RS00405 ea52908e895bf4bf0694dfb5cefb1a5f 460 Pfam PF13347 MFS/sugar transport protein 13 431 2.9E-102 T 09-03-2017 RG43_RS00405 ea52908e895bf4bf0694dfb5cefb1a5f 460 Gene3D G3DSA:1.20.1250.20 23 208 5.6E-11 T 09-03-2017 RG43_RS00405 ea52908e895bf4bf0694dfb5cefb1a5f 460 Gene3D G3DSA:1.20.1250.20 231 420 1.3E-4 T 09-03-2017 RG43_RS17085 2acdd22c4febc97298ec6c1affe67440 226 Pfam PF09588 YqaJ-like viral recombinase domain 24 166 2.4E-24 T 09-03-2017 IPR019080 YqaJ viral recombinase RG43_RS17085 2acdd22c4febc97298ec6c1affe67440 226 SUPERFAMILY SSF52980 5 225 1.93E-67 T 09-03-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 RG43_RS17085 2acdd22c4febc97298ec6c1affe67440 226 Gene3D G3DSA:3.90.320.10 5 225 1.2E-77 T 09-03-2017 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 RG43_RS10135 3c489f85cc16db5417a5d7aaa1015e40 438 Pfam PF07690 Major Facilitator Superfamily 273 431 1.3E-10 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS10135 3c489f85cc16db5417a5d7aaa1015e40 438 SUPERFAMILY SSF103473 21 434 2.22E-57 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS10135 3c489f85cc16db5417a5d7aaa1015e40 438 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 30 425 5.0E-151 T 09-03-2017 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 RG43_RS10135 3c489f85cc16db5417a5d7aaa1015e40 438 Pfam PF00083 Sugar (and other) transporter 28 236 6.6E-17 T 09-03-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RG43_RS10135 3c489f85cc16db5417a5d7aaa1015e40 438 Gene3D G3DSA:1.20.1250.20 253 437 4.2E-21 T 09-03-2017 RG43_RS10135 3c489f85cc16db5417a5d7aaa1015e40 438 Gene3D G3DSA:1.20.1250.20 22 229 1.5E-18 T 09-03-2017 RG43_RS10135 3c489f85cc16db5417a5d7aaa1015e40 438 ProSitePatterns PS00217 Sugar transport proteins signature 2. 134 159 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RG43_RS02640 791edeb6c63ca61656e8e6850181c09b 385 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 374 8.2E-86 T 09-03-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RG43_RS02640 791edeb6c63ca61656e8e6850181c09b 385 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 292 1.2E-14 T 09-03-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RG43_RS02640 791edeb6c63ca61656e8e6850181c09b 385 SUPERFAMILY SSF111369 52 299 1.02E-88 T 09-03-2017 RG43_RS02640 791edeb6c63ca61656e8e6850181c09b 385 Gene3D G3DSA:2.40.50.100 64 97 2.3E-26 T 09-03-2017 RG43_RS02640 791edeb6c63ca61656e8e6850181c09b 385 Gene3D G3DSA:2.40.50.100 172 207 2.3E-26 T 09-03-2017 RG43_RS02640 791edeb6c63ca61656e8e6850181c09b 385 Pfam PF00529 HlyD membrane-fusion protein of T1SS 157 359 3.4E-11 T 09-03-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RG43_RS11150 8e4726a6f71831b31778903ced045417 182 Pfam PF00239 Resolvase, N terminal domain 3 141 1.5E-41 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RG43_RS11150 8e4726a6f71831b31778903ced045417 182 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 09-03-2017 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 RG43_RS11150 8e4726a6f71831b31778903ced045417 182 SMART SM00857 3 141 3.6E-51 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RG43_RS11150 8e4726a6f71831b31778903ced045417 182 SUPERFAMILY SSF53041 1 141 5.75E-40 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RG43_RS11150 8e4726a6f71831b31778903ced045417 182 Pfam PF02796 Helix-turn-helix domain of resolvase 143 179 1.2E-5 T 09-03-2017 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 RG43_RS11150 8e4726a6f71831b31778903ced045417 182 Gene3D G3DSA:1.10.10.60 143 181 1.6E-4 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS11150 8e4726a6f71831b31778903ced045417 182 Gene3D G3DSA:3.40.50.1390 1 124 8.8E-36 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RG43_RS21195 7984ce2d5a17419bf134e2c8ab79d8e5 43 Pfam PF15894 Inhibitor of glucose uptake transporter SgrT 3 37 3.0E-11 T 09-03-2017 IPR031767 Inhibitor of glucose uptake transporter SgrT GO:0046325 RG43_RS19145 28ea057f2be462c5d1aa36c12293c25a 324 SUPERFAMILY SSF51569 4 319 1.03E-129 T 09-03-2017 RG43_RS19145 28ea057f2be462c5d1aa36c12293c25a 324 SMART SM01004 3 321 1.2E-211 T 09-03-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RG43_RS19145 28ea057f2be462c5d1aa36c12293c25a 324 Gene3D G3DSA:3.20.20.70 2 319 3.9E-139 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS19145 28ea057f2be462c5d1aa36c12293c25a 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 121 135 1.2E-54 T 09-03-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RG43_RS19145 28ea057f2be462c5d1aa36c12293c25a 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 240 256 1.2E-54 T 09-03-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RG43_RS19145 28ea057f2be462c5d1aa36c12293c25a 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 151 170 1.2E-54 T 09-03-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RG43_RS19145 28ea057f2be462c5d1aa36c12293c25a 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 265 280 1.2E-54 T 09-03-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RG43_RS19145 28ea057f2be462c5d1aa36c12293c25a 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 295 314 1.2E-54 T 09-03-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RG43_RS19145 28ea057f2be462c5d1aa36c12293c25a 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 189 208 1.2E-54 T 09-03-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RG43_RS19145 28ea057f2be462c5d1aa36c12293c25a 324 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 240 252 - T 09-03-2017 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RG43_RS19145 28ea057f2be462c5d1aa36c12293c25a 324 PIRSF PIRSF001415 1 323 5.6E-150 T 09-03-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RG43_RS19145 28ea057f2be462c5d1aa36c12293c25a 324 Pfam PF00490 Delta-aminolevulinic acid dehydratase 6 319 1.8E-136 T 09-03-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RG43_RS23925 8f4d5a6abb49fde133261dddefea5fd2 427 Gene3D G3DSA:1.20.1250.20 15 203 2.7E-46 T 09-03-2017 RG43_RS23925 8f4d5a6abb49fde133261dddefea5fd2 427 SUPERFAMILY SSF103473 13 424 8.37E-84 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS23925 8f4d5a6abb49fde133261dddefea5fd2 427 Gene3D G3DSA:1.20.1250.20 229 425 2.2E-28 T 09-03-2017 RG43_RS23925 8f4d5a6abb49fde133261dddefea5fd2 427 Pfam PF07690 Major Facilitator Superfamily 28 387 9.2E-57 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS23925 8f4d5a6abb49fde133261dddefea5fd2 427 PIRSF PIRSF002808 7 386 2.4E-39 T 09-03-2017 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 RG43_RS14330 13dbeaa606f4bdc57d6add2d7d99d483 215 Pfam PF01914 MarC family integral membrane protein 9 210 1.3E-75 T 09-03-2017 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 RG43_RS14330 13dbeaa606f4bdc57d6add2d7d99d483 215 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 8 206 1.3E-85 T 09-03-2017 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 RG43_RS20875 cf133dc232c56f8cc2d25645817977ee 409 Gene3D G3DSA:3.20.20.370 202 371 3.7E-21 T 09-03-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 RG43_RS20875 cf133dc232c56f8cc2d25645817977ee 409 SUPERFAMILY SSF88713 191 376 2.64E-28 T 09-03-2017 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RG43_RS20875 cf133dc232c56f8cc2d25645817977ee 409 Pfam PF01522 Polysaccharide deacetylase 228 366 6.8E-21 T 09-03-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 RG43_RS13945 8363268fa7b8ab3c96eca838750c1a4c 330 Gene3D G3DSA:3.40.50.300 2 260 2.6E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS13945 8363268fa7b8ab3c96eca838750c1a4c 330 SUPERFAMILY SSF52540 3 264 3.03E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS13945 8363268fa7b8ab3c96eca838750c1a4c 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 1.9E-20 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RG43_RS13945 8363268fa7b8ab3c96eca838750c1a4c 330 SMART SM00382 32 235 2.5E-5 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS13945 8363268fa7b8ab3c96eca838750c1a4c 330 Pfam PF00005 ABC transporter 24 187 1.4E-27 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS13945 8363268fa7b8ab3c96eca838750c1a4c 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 7.1E-17 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RG43_RS06550 22983af105ce88325fc502be2cc0147d 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 51 66 2.1E-9 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RG43_RS06550 22983af105ce88325fc502be2cc0147d 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 18 33 2.1E-9 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RG43_RS06550 22983af105ce88325fc502be2cc0147d 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 66 81 2.1E-9 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RG43_RS06550 22983af105ce88325fc502be2cc0147d 99 Pfam PF01022 Bacterial regulatory protein, arsR family 23 70 1.0E-14 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RG43_RS06550 22983af105ce88325fc502be2cc0147d 99 SMART SM00418 16 95 1.8E-25 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RG43_RS06550 22983af105ce88325fc502be2cc0147d 99 Gene3D G3DSA:1.10.10.10 3 98 2.1E-31 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS06550 22983af105ce88325fc502be2cc0147d 99 SUPERFAMILY SSF46785 11 98 2.26E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS08900 d9b6ca8a10e71c2dca8b6564e285f9a8 364 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 152 359 4.7E-41 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS08900 d9b6ca8a10e71c2dca8b6564e285f9a8 364 Gene3D G3DSA:1.10.3720.10 131 351 3.9E-15 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS08900 d9b6ca8a10e71c2dca8b6564e285f9a8 364 SUPERFAMILY SSF161098 131 345 1.7E-15 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS25030 654589fbd0159975e9024582a2cf47d1 316 SUPERFAMILY SSF143865 1 255 4.71E-38 T 09-03-2017 RG43_RS25030 654589fbd0159975e9024582a2cf47d1 316 SUPERFAMILY SSF144083 251 314 1.31E-20 T 09-03-2017 RG43_RS25030 654589fbd0159975e9024582a2cf47d1 316 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 3 316 5.4E-115 T 09-03-2017 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 RG43_RS25030 654589fbd0159975e9024582a2cf47d1 316 Pfam PF01544 CorA-like Mg2+ transporter protein 26 312 6.5E-57 T 09-03-2017 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 RG43_RS25030 654589fbd0159975e9024582a2cf47d1 316 Gene3D G3DSA:1.20.58.340 240 316 2.6E-28 T 09-03-2017 RG43_RS21075 893c12d1c5aaac5930695f74306015f2 276 Pfam PF08478 POTRA domain, FtsQ-type 56 126 1.6E-19 T 09-03-2017 IPR013685 Polypeptide-transport-associated, FtsQ-type RG43_RS21075 893c12d1c5aaac5930695f74306015f2 276 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 25 255 26.08 T 09-03-2017 IPR026579 Cell division protein FtsQ GO:0090529 RG43_RS21075 893c12d1c5aaac5930695f74306015f2 276 Pfam PF03799 Cell division protein FtsQ 130 247 1.9E-27 T 09-03-2017 IPR005548 Cell division protein FtsQ/DivIB RG43_RS10705 0b2aceb704c9cf7816726884a0248460 334 Gene3D G3DSA:2.30.330.10 242 323 4.7E-6 T 09-03-2017 RG43_RS10705 0b2aceb704c9cf7816726884a0248460 334 PIRSF PIRSF002888 2 331 9.0E-101 T 09-03-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 RG43_RS10705 0b2aceb704c9cf7816726884a0248460 334 SUPERFAMILY SSF101801 249 323 1.57E-12 T 09-03-2017 IPR001543 Surface presentation of antigen (SpoA) RG43_RS10705 0b2aceb704c9cf7816726884a0248460 334 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 4 321 2.7E-120 T 09-03-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 RG43_RS10705 0b2aceb704c9cf7816726884a0248460 334 Pfam PF02154 Flagellar motor switch protein FliM 38 231 2.6E-80 T 09-03-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 RG43_RS10705 0b2aceb704c9cf7816726884a0248460 334 SUPERFAMILY SSF103039 49 231 3.66E-18 T 09-03-2017 IPR028976 CheC-like domain RG43_RS10705 0b2aceb704c9cf7816726884a0248460 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 89 105 2.9E-32 T 09-03-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 RG43_RS10705 0b2aceb704c9cf7816726884a0248460 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 114 133 2.9E-32 T 09-03-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 RG43_RS10705 0b2aceb704c9cf7816726884a0248460 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 3 16 2.9E-32 T 09-03-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 RG43_RS10705 0b2aceb704c9cf7816726884a0248460 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 213 231 2.9E-32 T 09-03-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 RG43_RS10705 0b2aceb704c9cf7816726884a0248460 334 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 253 321 1.8E-16 T 09-03-2017 IPR001543 Surface presentation of antigen (SpoA) RG43_RS21055 3de7395019cf74412a8b9b20b72e1dec 170 Hamap MF_01332 Secretion monitor [secM]. 1 170 43.15 T 09-03-2017 IPR009502 Secretion monitor GO:0045182 RG43_RS21055 3de7395019cf74412a8b9b20b72e1dec 170 ProDom PD089227 MONITOR PERIPLASMIC SECRETION PRECURSOR SIGNAL YACA 1 170 5.0E-88 T 09-03-2017 IPR009502 Secretion monitor GO:0045182 RG43_RS21055 3de7395019cf74412a8b9b20b72e1dec 170 Pfam PF06558 Secretion monitor precursor protein (SecM) 24 167 8.1E-54 T 09-03-2017 IPR009502 Secretion monitor GO:0045182 RG43_RS21055 3de7395019cf74412a8b9b20b72e1dec 170 PIRSF PIRSF004572 1 170 1.4E-85 T 09-03-2017 IPR009502 Secretion monitor GO:0045182 RG43_RS16525 e6520cd2b94f95fa12f6d6abdc873699 530 Pfam PF12848 ABC transporter 224 309 5.2E-21 T 09-03-2017 IPR032781 ABC-transporter extension domain RG43_RS16525 e6520cd2b94f95fa12f6d6abdc873699 530 Pfam PF00005 ABC transporter 18 184 2.1E-19 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS16525 e6520cd2b94f95fa12f6d6abdc873699 530 Pfam PF00005 ABC transporter 336 467 4.9E-24 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS16525 e6520cd2b94f95fa12f6d6abdc873699 530 SUPERFAMILY SSF52540 6 237 5.73E-46 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16525 e6520cd2b94f95fa12f6d6abdc873699 530 Gene3D G3DSA:3.40.50.300 5 100 5.2E-49 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16525 e6520cd2b94f95fa12f6d6abdc873699 530 Gene3D G3DSA:3.40.50.300 132 280 5.2E-49 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16525 e6520cd2b94f95fa12f6d6abdc873699 530 SMART SM00382 26 228 6.5E-10 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS16525 e6520cd2b94f95fa12f6d6abdc873699 530 SMART SM00382 344 521 1.4E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS16525 e6520cd2b94f95fa12f6d6abdc873699 530 SUPERFAMILY SSF52540 298 523 1.56E-46 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16525 e6520cd2b94f95fa12f6d6abdc873699 530 Gene3D G3DSA:3.40.50.300 318 528 1.1E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS19055 76276175b24bc2a79c2eb244dd5c3de7 63 Pfam PF16362 YaiA protein 1 63 7.7E-40 T 09-03-2017 IPR032303 YaiA protein RG43_RS19285 232bb3048f1811892520edd347616783 203 Pfam PF12464 Maltose acetyltransferase 8 59 2.5E-10 T 09-03-2017 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 RG43_RS19285 232bb3048f1811892520edd347616783 203 SMART SM01266 6 60 1.3E-14 T 09-03-2017 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 RG43_RS19285 232bb3048f1811892520edd347616783 203 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 132 165 8.8E-11 T 09-03-2017 IPR001451 Hexapeptide repeat RG43_RS19285 232bb3048f1811892520edd347616783 203 SUPERFAMILY SSF51161 6 197 1.52E-55 T 09-03-2017 IPR011004 Trimeric LpxA-like RG43_RS19285 232bb3048f1811892520edd347616783 203 Gene3D G3DSA:2.160.10.10 5 190 8.8E-62 T 09-03-2017 RG43_RS19285 232bb3048f1811892520edd347616783 203 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 140 168 - T 09-03-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 RG43_RS19285 232bb3048f1811892520edd347616783 203 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 96 110 0.23 T 09-03-2017 IPR001451 Hexapeptide repeat RG43_RS24145 546aa9cd3f535417bdae6ff307552001 248 Gene3D G3DSA:3.40.50.80 97 248 1.3E-47 T 09-03-2017 RG43_RS24145 546aa9cd3f535417bdae6ff307552001 248 Gene3D G3DSA:2.40.30.10 2 96 1.3E-32 T 09-03-2017 RG43_RS24145 546aa9cd3f535417bdae6ff307552001 248 SUPERFAMILY SSF52343 103 248 2.49E-38 T 09-03-2017 RG43_RS24145 546aa9cd3f535417bdae6ff307552001 248 Pfam PF00970 Oxidoreductase FAD-binding domain 18 90 3.2E-8 T 09-03-2017 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 RG43_RS24145 546aa9cd3f535417bdae6ff307552001 248 Pfam PF00175 Oxidoreductase NAD-binding domain 111 222 1.1E-19 T 09-03-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 RG43_RS24145 546aa9cd3f535417bdae6ff307552001 248 SUPERFAMILY SSF63380 3 100 1.43E-25 T 09-03-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RG43_RS12520 681c6b4ad29902edac090fcde2cc95c7 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 2.4E-92 T 09-03-2017 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 RG43_RS12520 681c6b4ad29902edac090fcde2cc95c7 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 3.7E-60 T 09-03-2017 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 RG43_RS12520 681c6b4ad29902edac090fcde2cc95c7 193 PIRSF PIRSF006102 1 193 8.7E-60 T 09-03-2017 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 RG43_RS12520 681c6b4ad29902edac090fcde2cc95c7 193 Hamap MF_00459 Electron transport complex subunit RsxA [rsxA]. 2 191 26.541 T 09-03-2017 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 RG43_RS00670 e8c576ae9b777b43591ed7dca04bcfd9 83 PRINTS PR00160 Glutaredoxin signature 46 59 3.7E-18 T 09-03-2017 IPR014025 Glutaredoxin subgroup RG43_RS00670 e8c576ae9b777b43591ed7dca04bcfd9 83 PRINTS PR00160 Glutaredoxin signature 4 22 3.7E-18 T 09-03-2017 IPR014025 Glutaredoxin subgroup RG43_RS00670 e8c576ae9b777b43591ed7dca04bcfd9 83 PRINTS PR00160 Glutaredoxin signature 60 73 3.7E-18 T 09-03-2017 IPR014025 Glutaredoxin subgroup RG43_RS00670 e8c576ae9b777b43591ed7dca04bcfd9 83 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 09-03-2017 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 RG43_RS00670 e8c576ae9b777b43591ed7dca04bcfd9 83 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 82 2.6E-37 T 09-03-2017 IPR011900 Glutaredoxin, GrxC GO:0045454 RG43_RS00670 e8c576ae9b777b43591ed7dca04bcfd9 83 Pfam PF00462 Glutaredoxin 4 63 3.2E-24 T 09-03-2017 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 RG43_RS00670 e8c576ae9b777b43591ed7dca04bcfd9 83 SUPERFAMILY SSF52833 1 83 5.62E-29 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS00670 e8c576ae9b777b43591ed7dca04bcfd9 83 Gene3D G3DSA:3.40.30.10 1 73 4.2E-31 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS09135 923a1006e0ac152ecee664392b8a6173 204 Pfam PF09335 SNARE associated Golgi protein 35 155 1.6E-16 T 09-03-2017 IPR032816 SNARE associated Golgi protein RG43_RS15555 8f4769f8d33e7ad6c382abd42325b9f5 306 Gene3D G3DSA:2.60.260.20 110 199 2.3E-16 T 09-03-2017 RG43_RS15555 8f4769f8d33e7ad6c382abd42325b9f5 306 Gene3D G3DSA:1.10.287.110 2 105 1.5E-28 T 09-03-2017 IPR001623 DnaJ domain RG43_RS15555 8f4769f8d33e7ad6c382abd42325b9f5 306 SUPERFAMILY SSF46565 1 99 2.22E-27 T 09-03-2017 IPR001623 DnaJ domain RG43_RS15555 8f4769f8d33e7ad6c382abd42325b9f5 306 Hamap MF_01154 Curved DNA-binding protein [cbpA]. 1 306 57.167 T 09-03-2017 IPR023859 DNA-binding protein, curved-DNA RG43_RS15555 8f4769f8d33e7ad6c382abd42325b9f5 306 Gene3D G3DSA:2.60.260.20 201 276 2.9E-17 T 09-03-2017 RG43_RS15555 8f4769f8d33e7ad6c382abd42325b9f5 306 SUPERFAMILY SSF49493 204 284 1.22E-17 T 09-03-2017 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 RG43_RS15555 8f4769f8d33e7ad6c382abd42325b9f5 306 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 09-03-2017 IPR018253 DnaJ domain, conserved site RG43_RS15555 8f4769f8d33e7ad6c382abd42325b9f5 306 PRINTS PR00625 DnaJ domain signature 61 80 1.8E-17 T 09-03-2017 IPR001623 DnaJ domain RG43_RS15555 8f4769f8d33e7ad6c382abd42325b9f5 306 PRINTS PR00625 DnaJ domain signature 41 61 1.8E-17 T 09-03-2017 IPR001623 DnaJ domain RG43_RS15555 8f4769f8d33e7ad6c382abd42325b9f5 306 PRINTS PR00625 DnaJ domain signature 25 40 1.8E-17 T 09-03-2017 IPR001623 DnaJ domain RG43_RS15555 8f4769f8d33e7ad6c382abd42325b9f5 306 PRINTS PR00625 DnaJ domain signature 7 25 1.8E-17 T 09-03-2017 IPR001623 DnaJ domain RG43_RS15555 8f4769f8d33e7ad6c382abd42325b9f5 306 SUPERFAMILY SSF49493 115 210 1.7E-15 T 09-03-2017 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 RG43_RS15555 8f4769f8d33e7ad6c382abd42325b9f5 306 Pfam PF00226 DnaJ domain 5 66 1.9E-23 T 09-03-2017 IPR001623 DnaJ domain RG43_RS15555 8f4769f8d33e7ad6c382abd42325b9f5 306 SMART SM00271 4 61 3.0E-26 T 09-03-2017 IPR001623 DnaJ domain RG43_RS15555 8f4769f8d33e7ad6c382abd42325b9f5 306 Pfam PF01556 DnaJ C terminal domain 120 276 4.8E-34 T 09-03-2017 IPR002939 Chaperone DnaJ, C-terminal RG43_RS21850 d7a57c02ddae79dc551068d83176a98d 480 Pfam PF07969 Amidohydrolase family 45 459 4.9E-42 T 09-03-2017 IPR013108 Amidohydrolase 3 RG43_RS21850 d7a57c02ddae79dc551068d83176a98d 480 SUPERFAMILY SSF51556 57 415 2.55E-79 T 09-03-2017 IPR032466 Metal-dependent hydrolase RG43_RS21850 d7a57c02ddae79dc551068d83176a98d 480 Gene3D G3DSA:2.30.40.10 400 459 4.5E-10 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RG43_RS21850 d7a57c02ddae79dc551068d83176a98d 480 Gene3D G3DSA:3.20.20.140 71 281 1.6E-111 T 09-03-2017 RG43_RS21850 d7a57c02ddae79dc551068d83176a98d 480 Gene3D G3DSA:3.20.20.140 340 399 1.6E-111 T 09-03-2017 RG43_RS21850 d7a57c02ddae79dc551068d83176a98d 480 Gene3D G3DSA:3.30.1490.130 284 339 4.7E-26 T 09-03-2017 IPR023100 D-aminoacylase, insert domain GO:0016811 RG43_RS21850 d7a57c02ddae79dc551068d83176a98d 480 SUPERFAMILY SSF51338 3 56 5.95E-20 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RG43_RS21850 d7a57c02ddae79dc551068d83176a98d 480 SUPERFAMILY SSF51338 415 475 5.95E-20 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RG43_RS21850 d7a57c02ddae79dc551068d83176a98d 480 Gene3D G3DSA:2.30.40.10 3 70 1.1E-16 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RG43_RS12285 3ac9201fcdc29eb11782c199593ed96b 239 SUPERFAMILY SSF54862 50 236 1.67E-52 T 09-03-2017 RG43_RS12285 3ac9201fcdc29eb11782c199593ed96b 239 Pfam PF13247 4Fe-4S dicluster domain 101 197 3.2E-22 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS12285 3ac9201fcdc29eb11782c199593ed96b 239 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 141 152 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS12285 3ac9201fcdc29eb11782c199593ed96b 239 Gene3D G3DSA:3.30.70.20 117 167 1.2E-24 T 09-03-2017 RG43_RS12285 3ac9201fcdc29eb11782c199593ed96b 239 Gene3D G3DSA:3.30.70.20 53 116 1.8E-25 T 09-03-2017 RG43_RS12285 3ac9201fcdc29eb11782c199593ed96b 239 Gene3D G3DSA:3.30.70.20 168 204 1.8E-25 T 09-03-2017 RG43_RS26585 01253ca20e74209bc3ba1c7febf7acff 141 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 134 8.7E-31 T 09-03-2017 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 RG43_RS26585 01253ca20e74209bc3ba1c7febf7acff 141 TIGRFAM TIGR02803 ExbD_1: TonB system transport protein ExbD 15 136 1.7E-70 T 09-03-2017 IPR014170 TonB system transport protein ExbD type-1 GO:0006810|GO:0016020 RG43_RS04210 01253ca20e74209bc3ba1c7febf7acff 141 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 134 8.7E-31 T 09-03-2017 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 RG43_RS04210 01253ca20e74209bc3ba1c7febf7acff 141 TIGRFAM TIGR02803 ExbD_1: TonB system transport protein ExbD 15 136 1.7E-70 T 09-03-2017 IPR014170 TonB system transport protein ExbD type-1 GO:0006810|GO:0016020 RG43_RS18115 54f06a36c337d18ecc84148e69eb0efe 536 SUPERFAMILY SSF56801 5 532 3.01E-125 T 09-03-2017 RG43_RS18115 54f06a36c337d18ecc84148e69eb0efe 536 TIGRFAM TIGR02275 DHB_AMP_lig: (2,3-dihydroxybenzoyl)adenylate synthase 3 527 2.9E-283 T 09-03-2017 IPR011963 2,3-dihydroxybenzoate-AMP ligase GO:0008668|GO:0019290 RG43_RS18115 54f06a36c337d18ecc84148e69eb0efe 536 Gene3D G3DSA:2.30.38.10 360 430 1.2E-21 T 09-03-2017 RG43_RS18115 54f06a36c337d18ecc84148e69eb0efe 536 Gene3D G3DSA:3.40.50.980 192 349 8.9E-33 T 09-03-2017 RG43_RS18115 54f06a36c337d18ecc84148e69eb0efe 536 Pfam PF13193 AMP-binding enzyme C-terminal domain 446 520 3.6E-12 T 09-03-2017 IPR025110 AMP-binding enzyme C-terminal domain RG43_RS18115 54f06a36c337d18ecc84148e69eb0efe 536 Gene3D G3DSA:3.30.300.30 432 533 5.3E-27 T 09-03-2017 RG43_RS18115 54f06a36c337d18ecc84148e69eb0efe 536 Gene3D G3DSA:3.40.50.980 36 191 3.8E-26 T 09-03-2017 RG43_RS18115 54f06a36c337d18ecc84148e69eb0efe 536 ProSitePatterns PS00455 Putative AMP-binding domain signature. 187 198 - T 09-03-2017 IPR020845 AMP-binding, conserved site RG43_RS18115 54f06a36c337d18ecc84148e69eb0efe 536 Pfam PF00501 AMP-binding enzyme 37 437 1.1E-75 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RG43_RS19005 87374e765977bd69836c9874144a97ed 400 SUPERFAMILY SSF56300 1 335 3.64E-62 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like RG43_RS19005 87374e765977bd69836c9874144a97ed 400 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 254 6.8E-96 T 09-03-2017 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 RG43_RS19005 87374e765977bd69836c9874144a97ed 400 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 276 373 1.2E-24 T 09-03-2017 IPR026843 Nuclease SbcCD subunit D, C-terminal domain RG43_RS19005 87374e765977bd69836c9874144a97ed 400 Gene3D G3DSA:3.60.21.10 1 275 3.0E-67 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like RG43_RS19005 87374e765977bd69836c9874144a97ed 400 Pfam PF00149 Calcineurin-like phosphoesterase 1 225 8.1E-19 T 09-03-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RG43_RS14020 deacbc5a7888c5701d48c66b3181937d 108 Gene3D G3DSA:3.30.780.10 28 108 3.2E-35 T 09-03-2017 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 RG43_RS14020 deacbc5a7888c5701d48c66b3181937d 108 PIRSF PIRSF037511 1 108 1.2E-36 T 09-03-2017 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 RG43_RS14020 deacbc5a7888c5701d48c66b3181937d 108 Pfam PF01253 Translation initiation factor SUI1 32 101 7.1E-19 T 09-03-2017 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 RG43_RS14020 deacbc5a7888c5701d48c66b3181937d 108 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 8 108 8.9E-40 T 09-03-2017 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 RG43_RS14020 deacbc5a7888c5701d48c66b3181937d 108 SUPERFAMILY SSF55159 6 104 1.7E-25 T 09-03-2017 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 RG43_RS26225 42e9a2ffeea441976d79e67d7ff01cbd 487 PIRSF PIRSF002457 2 487 4.5E-133 T 09-03-2017 IPR030676 Citrate carrier CitT-related RG43_RS26225 42e9a2ffeea441976d79e67d7ff01cbd 487 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 24 482 1.2E-168 T 09-03-2017 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 RG43_RS26225 42e9a2ffeea441976d79e67d7ff01cbd 487 Pfam PF00939 Sodium:sulfate symporter transmembrane region 5 486 5.2E-186 T 09-03-2017 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 RG43_RS03850 42e9a2ffeea441976d79e67d7ff01cbd 487 PIRSF PIRSF002457 2 487 4.5E-133 T 09-03-2017 IPR030676 Citrate carrier CitT-related RG43_RS03850 42e9a2ffeea441976d79e67d7ff01cbd 487 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 24 482 1.2E-168 T 09-03-2017 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 RG43_RS03850 42e9a2ffeea441976d79e67d7ff01cbd 487 Pfam PF00939 Sodium:sulfate symporter transmembrane region 5 486 5.2E-186 T 09-03-2017 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 RG43_RS14345 fdac5ebd57f1155340d7ac31bae488cd 137 PIRSF PIRSF002096 1 135 4.2E-58 T 09-03-2017 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 RG43_RS14345 fdac5ebd57f1155340d7ac31bae488cd 137 Pfam PF00816 H-NS histone family 32 127 1.4E-20 T 09-03-2017 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 RG43_RS14345 fdac5ebd57f1155340d7ac31bae488cd 137 Gene3D G3DSA:1.10.287.1050 1 58 4.4E-32 T 09-03-2017 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 RG43_RS14345 fdac5ebd57f1155340d7ac31bae488cd 137 SMART SM00528 87 135 1.0E-26 T 09-03-2017 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 RG43_RS14345 fdac5ebd57f1155340d7ac31bae488cd 137 SUPERFAMILY SSF81273 2 58 5.1E-18 T 09-03-2017 RG43_RS14345 fdac5ebd57f1155340d7ac31bae488cd 137 Gene3D G3DSA:4.10.430.10 91 136 6.3E-27 T 09-03-2017 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 RG43_RS14345 fdac5ebd57f1155340d7ac31bae488cd 137 SUPERFAMILY SSF81273 93 136 1.02E-12 T 09-03-2017 RG43_RS25640 416a808f4fc13ba68768cf7d39153fcd 46 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 3.6E-27 T 09-03-2017 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS25640 416a808f4fc13ba68768cf7d39153fcd 46 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 09-03-2017 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS25640 416a808f4fc13ba68768cf7d39153fcd 46 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.163 T 09-03-2017 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS25640 416a808f4fc13ba68768cf7d39153fcd 46 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 31 4.0E-11 T 09-03-2017 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS25640 416a808f4fc13ba68768cf7d39153fcd 46 Pfam PF00468 Ribosomal protein L34 1 44 1.7E-24 T 09-03-2017 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS08790 6d7d675f418d05c29874944be89efc88 245 Pfam PF01578 Cytochrome C assembly protein 9 184 1.3E-32 T 09-03-2017 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 RG43_RS08790 6d7d675f418d05c29874944be89efc88 245 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 225 5.4E-85 T 09-03-2017 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 RG43_RS08790 6d7d675f418d05c29874944be89efc88 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 3.3E-64 T 09-03-2017 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 RG43_RS08790 6d7d675f418d05c29874944be89efc88 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 3.3E-64 T 09-03-2017 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 RG43_RS08790 6d7d675f418d05c29874944be89efc88 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 3.3E-64 T 09-03-2017 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 RG43_RS08790 6d7d675f418d05c29874944be89efc88 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 3.3E-64 T 09-03-2017 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 RG43_RS08790 6d7d675f418d05c29874944be89efc88 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 3.3E-64 T 09-03-2017 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 RG43_RS08790 6d7d675f418d05c29874944be89efc88 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 201 225 3.3E-64 T 09-03-2017 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 RG43_RS21460 010d66c50978a8b428e46ab517ab3ed9 388 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 4 386 24.076 T 09-03-2017 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 RG43_RS21460 010d66c50978a8b428e46ab517ab3ed9 388 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 7 380 9.0E-200 T 09-03-2017 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 RG43_RS21460 010d66c50978a8b428e46ab517ab3ed9 388 Gene3D G3DSA:1.20.1530.10 2 385 2.8E-161 T 09-03-2017 IPR023171 Na/H antiporter domain RG43_RS21460 010d66c50978a8b428e46ab517ab3ed9 388 Pfam PF06965 Na+/H+ antiporter 1 6 380 1.4E-152 T 09-03-2017 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 RG43_RS18800 a012cfd0e4de441348271c672b888a8a 424 Pfam PF06689 ClpX C4-type zinc finger 13 50 3.0E-21 T 09-03-2017 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 RG43_RS18800 a012cfd0e4de441348271c672b888a8a 424 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 5 412 3.7E-217 T 09-03-2017 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 RG43_RS18800 a012cfd0e4de441348271c672b888a8a 424 Pfam PF07724 AAA domain (Cdc48 subfamily) 112 310 9.3E-49 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 RG43_RS18800 a012cfd0e4de441348271c672b888a8a 424 Gene3D G3DSA:1.10.8.60 316 413 2.1E-38 T 09-03-2017 RG43_RS18800 a012cfd0e4de441348271c672b888a8a 424 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 317 395 1.7E-17 T 09-03-2017 IPR019489 Clp ATPase, C-terminal RG43_RS18800 a012cfd0e4de441348271c672b888a8a 424 SUPERFAMILY SSF52540 64 403 1.78E-73 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS18800 a012cfd0e4de441348271c672b888a8a 424 SMART SM00382 111 333 1.3E-9 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS18800 a012cfd0e4de441348271c672b888a8a 424 SMART SM00994 12 51 1.0E-24 T 09-03-2017 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 RG43_RS18800 a012cfd0e4de441348271c672b888a8a 424 Gene3D G3DSA:3.40.50.300 66 253 6.5E-52 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS18800 a012cfd0e4de441348271c672b888a8a 424 Gene3D G3DSA:3.40.50.300 294 311 6.5E-52 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS18800 a012cfd0e4de441348271c672b888a8a 424 SUPERFAMILY SSF57716 13 48 5.84E-12 T 09-03-2017 RG43_RS18800 a012cfd0e4de441348271c672b888a8a 424 SMART SM01086 317 412 4.8E-36 T 09-03-2017 IPR019489 Clp ATPase, C-terminal RG43_RS18800 a012cfd0e4de441348271c672b888a8a 424 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 4 415 53.718 T 09-03-2017 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 RG43_RS25705 1aa2b9c26054e82469f4aacc75304705 430 SUPERFAMILY SSF103473 7 426 3.27E-83 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS25705 1aa2b9c26054e82469f4aacc75304705 430 Pfam PF07690 Major Facilitator Superfamily 21 389 6.5E-56 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS25705 1aa2b9c26054e82469f4aacc75304705 430 Gene3D G3DSA:1.20.1250.20 234 425 2.9E-27 T 09-03-2017 RG43_RS25705 1aa2b9c26054e82469f4aacc75304705 430 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 22 405 2.5E-134 T 09-03-2017 RG43_RS25705 1aa2b9c26054e82469f4aacc75304705 430 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 23 423 5.8E-149 T 09-03-2017 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 RG43_RS25705 1aa2b9c26054e82469f4aacc75304705 430 Gene3D G3DSA:1.20.1250.20 11 195 6.1E-47 T 09-03-2017 RG43_RS15765 747132d4ca610e7ca89a90a157a09b9c 137 SMART SM00881 9 104 3.9E-26 T 09-03-2017 IPR003781 CoA-binding GO:0048037 RG43_RS15765 747132d4ca610e7ca89a90a157a09b9c 137 SUPERFAMILY SSF51735 4 135 2.49E-43 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS15765 747132d4ca610e7ca89a90a157a09b9c 137 Pfam PF13380 CoA binding domain 15 130 7.1E-39 T 09-03-2017 IPR003781 CoA-binding GO:0048037 RG43_RS15765 747132d4ca610e7ca89a90a157a09b9c 137 Gene3D G3DSA:3.40.50.720 3 135 6.0E-49 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS22275 2999aedf9227ee7a7d4a4db07adf397f 551 Gene3D G3DSA:3.90.400.10 107 175 1.4E-31 T 09-03-2017 RG43_RS22275 2999aedf9227ee7a7d4a4db07adf397f 551 SUPERFAMILY SSF51445 5 472 5.02E-155 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily RG43_RS22275 2999aedf9227ee7a7d4a4db07adf397f 551 Gene3D G3DSA:2.60.40.1180 476 550 8.9E-21 T 09-03-2017 IPR013780 Glycosyl hydrolase, all-beta RG43_RS22275 2999aedf9227ee7a7d4a4db07adf397f 551 SUPERFAMILY SSF51011 475 549 4.48E-18 T 09-03-2017 RG43_RS22275 2999aedf9227ee7a7d4a4db07adf397f 551 Pfam PF11941 Domain of unknown function (DUF3459) 459 548 2.1E-8 T 09-03-2017 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) RG43_RS22275 2999aedf9227ee7a7d4a4db07adf397f 551 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 7 548 2.3E-266 T 09-03-2017 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 RG43_RS22275 2999aedf9227ee7a7d4a4db07adf397f 551 SMART SM00642 15 414 1.0E-157 T 09-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RG43_RS22275 2999aedf9227ee7a7d4a4db07adf397f 551 Gene3D G3DSA:3.20.20.80 5 106 3.9E-125 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RG43_RS22275 2999aedf9227ee7a7d4a4db07adf397f 551 Gene3D G3DSA:3.20.20.80 176 473 3.9E-125 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RG43_RS22275 2999aedf9227ee7a7d4a4db07adf397f 551 Pfam PF00128 Alpha amylase, catalytic domain 30 372 1.3E-127 T 09-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RG43_RS16565 212324f644c55b20b1fade3fe23237e4 527 Pfam PF00884 Sulfatase 217 483 3.4E-43 T 09-03-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RG43_RS16565 212324f644c55b20b1fade3fe23237e4 527 SUPERFAMILY SSF53649 220 487 1.96E-19 T 09-03-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RG43_RS16565 212324f644c55b20b1fade3fe23237e4 527 Gene3D G3DSA:3.40.720.10 220 486 9.3E-13 T 09-03-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RG43_RS19570 244ea224211190bd2e6aba81f1cd8284 283 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 120 137 - T 09-03-2017 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 RG43_RS19570 244ea224211190bd2e6aba81f1cd8284 283 PRINTS PR00069 Aldo-keto reductase signature 35 59 1.4E-44 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RG43_RS19570 244ea224211190bd2e6aba81f1cd8284 283 PRINTS PR00069 Aldo-keto reductase signature 120 137 1.4E-44 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RG43_RS19570 244ea224211190bd2e6aba81f1cd8284 283 PRINTS PR00069 Aldo-keto reductase signature 193 217 1.4E-44 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RG43_RS19570 244ea224211190bd2e6aba81f1cd8284 283 PRINTS PR00069 Aldo-keto reductase signature 91 109 1.4E-44 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RG43_RS19570 244ea224211190bd2e6aba81f1cd8284 283 PRINTS PR00069 Aldo-keto reductase signature 154 183 1.4E-44 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RG43_RS19570 244ea224211190bd2e6aba81f1cd8284 283 SUPERFAMILY SSF51430 3 262 1.18E-89 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain RG43_RS19570 244ea224211190bd2e6aba81f1cd8284 283 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 39 56 - T 09-03-2017 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 RG43_RS19570 244ea224211190bd2e6aba81f1cd8284 283 Gene3D G3DSA:3.20.20.100 2 263 3.7E-100 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain RG43_RS19570 244ea224211190bd2e6aba81f1cd8284 283 Pfam PF00248 Aldo/keto reductase family 15 257 1.4E-46 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain RG43_RS10615 8c70c883a12f6c37dca2a9935d285006 472 Gene3D G3DSA:3.90.120.10 311 438 6.8E-29 T 09-03-2017 RG43_RS10615 8c70c883a12f6c37dca2a9935d285006 472 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 89 450 9.1E-105 T 09-03-2017 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 RG43_RS10615 8c70c883a12f6c37dca2a9935d285006 472 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 169 181 - T 09-03-2017 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-5334118 RG43_RS10615 8c70c883a12f6c37dca2a9935d285006 472 SUPERFAMILY SSF53335 87 450 9.56E-80 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS10615 8c70c883a12f6c37dca2a9935d285006 472 Gene3D G3DSA:3.40.50.150 87 310 7.1E-53 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS10615 8c70c883a12f6c37dca2a9935d285006 472 Pfam PF00145 C-5 cytosine-specific DNA methylase 87 448 6.8E-76 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS10615 8c70c883a12f6c37dca2a9935d285006 472 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 432 450 - T 09-03-2017 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 RG43_RS10615 8c70c883a12f6c37dca2a9935d285006 472 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 88 104 2.2E-15 T 09-03-2017 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 RG43_RS10615 8c70c883a12f6c37dca2a9935d285006 472 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 271 284 2.2E-15 T 09-03-2017 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 RG43_RS10615 8c70c883a12f6c37dca2a9935d285006 472 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 217 231 2.2E-15 T 09-03-2017 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 RG43_RS07475 cc44fa9784f4c378e369d4d663019ca4 229 SUPERFAMILY SSF51182 104 226 5.34E-29 T 09-03-2017 IPR011051 RmlC-like cupin domain RG43_RS07475 cc44fa9784f4c378e369d4d663019ca4 229 Pfam PF06249 Ethanolamine utilisation protein EutQ 81 228 2.5E-69 T 09-03-2017 IPR010424 Ethanolamine utilisation EutQ RG43_RS07475 cc44fa9784f4c378e369d4d663019ca4 229 Gene3D G3DSA:2.60.120.10 98 228 1.2E-49 T 09-03-2017 IPR014710 RmlC-like jelly roll fold RG43_RS13280 1bd911aea2f9b62aa523c3e96f3fcde5 664 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 30 541 6.3E-169 T 09-03-2017 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset RG43_RS13280 1bd911aea2f9b62aa523c3e96f3fcde5 664 Pfam PF05954 Phage late control gene D protein (GPD) 42 350 4.6E-97 T 09-03-2017 RG43_RS13280 1bd911aea2f9b62aa523c3e96f3fcde5 664 SUPERFAMILY SSF69255 383 470 2.88E-33 T 09-03-2017 RG43_RS13280 1bd911aea2f9b62aa523c3e96f3fcde5 664 SUPERFAMILY SSF69349 461 625 1.33E-36 T 09-03-2017 RG43_RS13280 1bd911aea2f9b62aa523c3e96f3fcde5 664 Gene3D G3DSA:2.40.50.230 389 470 6.5E-40 T 09-03-2017 IPR006531 Gp5 N-terminal RG43_RS13280 1bd911aea2f9b62aa523c3e96f3fcde5 664 SUPERFAMILY SSF69279 28 205 3.53E-51 T 09-03-2017 RG43_RS13280 1bd911aea2f9b62aa523c3e96f3fcde5 664 SUPERFAMILY SSF69279 221 381 2.72E-37 T 09-03-2017 RG43_RS13280 1bd911aea2f9b62aa523c3e96f3fcde5 664 Gene3D G3DSA:3.55.50.10 120 210 4.3E-33 T 09-03-2017 RG43_RS13280 1bd911aea2f9b62aa523c3e96f3fcde5 664 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 53 524 3.5E-126 T 09-03-2017 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein RG43_RS06910 10d7641f9df6acb5e2efea790a08e65b 126 SUPERFAMILY SSF56214 3 125 1.31E-29 T 09-03-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 RG43_RS06910 10d7641f9df6acb5e2efea790a08e65b 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 26.605 T 09-03-2017 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RG43_RS06910 10d7641f9df6acb5e2efea790a08e65b 126 Gene3D G3DSA:3.90.470.20 1 125 1.2E-41 T 09-03-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 RG43_RS06910 10d7641f9df6acb5e2efea790a08e65b 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 23 87 1.0E-32 T 09-03-2017 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RG43_RS06910 10d7641f9df6acb5e2efea790a08e65b 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 126 1.1E-40 T 09-03-2017 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RG43_RS06910 10d7641f9df6acb5e2efea790a08e65b 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 126 2.6E-61 T 09-03-2017 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RG43_RS06910 10d7641f9df6acb5e2efea790a08e65b 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 121 5.5E-24 T 09-03-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 RG43_RS01660 e27dfe41280c226798d70262443645be 356 Gene3D G3DSA:2.40.50.100 240 282 1.8E-10 T 09-03-2017 RG43_RS01660 e27dfe41280c226798d70262443645be 356 Gene3D G3DSA:2.40.50.100 342 356 1.8E-10 T 09-03-2017 RG43_RS01660 e27dfe41280c226798d70262443645be 356 Pfam PF00005 ABC transporter 21 162 1.1E-30 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS01660 e27dfe41280c226798d70262443645be 356 SMART SM00382 29 326 1.8E-10 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS01660 e27dfe41280c226798d70262443645be 356 Pfam PF08402 TOBE domain 278 348 4.1E-8 T 09-03-2017 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 RG43_RS01660 e27dfe41280c226798d70262443645be 356 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS01660 e27dfe41280c226798d70262443645be 356 SUPERFAMILY SSF52540 4 243 2.24E-83 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS01660 e27dfe41280c226798d70262443645be 356 SUPERFAMILY SSF50331 237 355 7.78E-29 T 09-03-2017 IPR008995 Molybdate/tungstate binding, C-terminal RG43_RS01660 e27dfe41280c226798d70262443645be 356 Gene3D G3DSA:2.40.50.140 283 341 8.1E-17 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS01660 e27dfe41280c226798d70262443645be 356 Gene3D G3DSA:3.40.50.300 4 235 4.0E-72 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS08905 8d8569be217f203301ea87c6083fc8cf 604 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 98 504 1.1E-69 T 09-03-2017 IPR000914 Solute-binding protein family 5 domain RG43_RS08905 8d8569be217f203301ea87c6083fc8cf 604 Gene3D G3DSA:3.90.76.10 90 173 1.1E-13 T 09-03-2017 RG43_RS08905 8d8569be217f203301ea87c6083fc8cf 604 SUPERFAMILY SSF53850 49 590 5.07E-109 T 09-03-2017 RG43_RS08905 8d8569be217f203301ea87c6083fc8cf 604 Gene3D G3DSA:3.40.190.10 174 319 4.7E-31 T 09-03-2017 RG43_RS08905 8d8569be217f203301ea87c6083fc8cf 604 PIRSF PIRSF002741 3 592 4.0E-183 T 09-03-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RG43_RS08905 8d8569be217f203301ea87c6083fc8cf 604 Gene3D G3DSA:3.10.105.10 320 558 1.7E-45 T 09-03-2017 RG43_RS24525 e211a1d66656b944a3f3db0b4b37f915 277 Hamap MF_00187 Sulfurtransferase FdhD [fdhD]. 13 276 33.697 T 09-03-2017 IPR003786 Protein FdhD GO:0016783 RG43_RS24525 e211a1d66656b944a3f3db0b4b37f915 277 SUPERFAMILY SSF53927 22 275 1.26E-81 T 09-03-2017 IPR016193 Cytidine deaminase-like GO:0003824 RG43_RS24525 e211a1d66656b944a3f3db0b4b37f915 277 Pfam PF02634 FdhD/NarQ family 38 275 3.5E-72 T 09-03-2017 IPR003786 Protein FdhD GO:0016783 RG43_RS24525 e211a1d66656b944a3f3db0b4b37f915 277 Gene3D G3DSA:3.10.20.10 40 125 5.0E-32 T 09-03-2017 RG43_RS24525 e211a1d66656b944a3f3db0b4b37f915 277 Gene3D G3DSA:3.40.140.10 139 275 7.5E-50 T 09-03-2017 RG43_RS24525 e211a1d66656b944a3f3db0b4b37f915 277 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 34 277 1.8E-102 T 09-03-2017 IPR003786 Protein FdhD GO:0016783 RG43_RS24525 e211a1d66656b944a3f3db0b4b37f915 277 PIRSF PIRSF015626 3 277 1.7E-82 T 09-03-2017 IPR003786 Protein FdhD GO:0016783 RG43_RS16270 b3fc6624eaef3f7485c560cb53730841 349 SUPERFAMILY SSF51735 12 282 9.8E-61 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS16270 b3fc6624eaef3f7485c560cb53730841 349 SUPERFAMILY SSF51735 310 347 9.8E-61 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS16270 b3fc6624eaef3f7485c560cb53730841 349 Gene3D G3DSA:3.90.25.10 317 344 1.2E-5 T 09-03-2017 RG43_RS16270 b3fc6624eaef3f7485c560cb53730841 349 Gene3D G3DSA:3.40.50.720 12 260 6.8E-42 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS16270 b3fc6624eaef3f7485c560cb53730841 349 Pfam PF01370 NAD dependent epimerase/dehydratase family 15 246 1.2E-26 T 09-03-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RG43_RS14500 cc002adb8067d3e8635f28e44dfd5dc4 418 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 418 5.0E-170 T 09-03-2017 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 RG43_RS14500 cc002adb8067d3e8635f28e44dfd5dc4 418 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 320 416 7.3E-24 T 09-03-2017 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 RG43_RS14500 cc002adb8067d3e8635f28e44dfd5dc4 418 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 418 30.859 T 09-03-2017 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 RG43_RS14500 cc002adb8067d3e8635f28e44dfd5dc4 418 SUPERFAMILY SSF69075 317 417 1.96E-27 T 09-03-2017 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 RG43_RS14500 cc002adb8067d3e8635f28e44dfd5dc4 418 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 156 4.4E-49 T 09-03-2017 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 RG43_RS14500 cc002adb8067d3e8635f28e44dfd5dc4 418 Gene3D G3DSA:3.40.50.720 184 358 1.1E-38 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS14500 cc002adb8067d3e8635f28e44dfd5dc4 418 PIRSF PIRSF000445 1 418 5.8E-155 T 09-03-2017 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 RG43_RS14500 cc002adb8067d3e8635f28e44dfd5dc4 418 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 172 306 5.3E-49 T 09-03-2017 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase RG43_RS14500 cc002adb8067d3e8635f28e44dfd5dc4 418 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 99 122 - T 09-03-2017 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 RG43_RS14500 cc002adb8067d3e8635f28e44dfd5dc4 418 SUPERFAMILY SSF69742 1 158 3.27E-47 T 09-03-2017 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 RG43_RS14500 cc002adb8067d3e8635f28e44dfd5dc4 418 SUPERFAMILY SSF51735 162 315 1.64E-34 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS03235 8600a6eaa89c293fe0d553b984bd046d 131 Gene3D G3DSA:3.40.1350.10 24 128 3.5E-37 T 09-03-2017 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 Reactome: R-HSA-6784531 RG43_RS03235 8600a6eaa89c293fe0d553b984bd046d 131 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 10 131 2.2E-60 T 09-03-2017 IPR003509 Uncharacterised protein family UPF0102 RG43_RS03235 8600a6eaa89c293fe0d553b984bd046d 131 Pfam PF02021 Uncharacterised protein family UPF0102 24 114 4.6E-24 T 09-03-2017 IPR003509 Uncharacterised protein family UPF0102 RG43_RS03235 8600a6eaa89c293fe0d553b984bd046d 131 Hamap MF_00048 UPF0102 protein YraN [yraN]. 16 128 23.642 T 09-03-2017 IPR003509 Uncharacterised protein family UPF0102 RG43_RS03235 8600a6eaa89c293fe0d553b984bd046d 131 SUPERFAMILY SSF52980 17 125 5.79E-23 T 09-03-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 RG43_RS23790 8db149aa24ca533fb58ad37447a8e174 142 SUPERFAMILY SSF46906 68 141 1.09E-25 T 09-03-2017 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 RG43_RS23790 8db149aa24ca533fb58ad37447a8e174 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 4.1E-24 T 09-03-2017 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 RG43_RS23790 8db149aa24ca533fb58ad37447a8e174 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 1.0E-16 T 09-03-2017 RG43_RS23790 8db149aa24ca533fb58ad37447a8e174 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.571 T 09-03-2017 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 RG43_RS23790 8db149aa24ca533fb58ad37447a8e174 142 SMART SM00649 9 141 4.6E-84 T 09-03-2017 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 RG43_RS23790 8db149aa24ca533fb58ad37447a8e174 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 1.2E-29 T 09-03-2017 IPR020784 Ribosomal protein L11, N-terminal RG43_RS23790 8db149aa24ca533fb58ad37447a8e174 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 142 3.2E-65 T 09-03-2017 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS23790 8db149aa24ca533fb58ad37447a8e174 142 SUPERFAMILY SSF54747 3 73 5.49E-30 T 09-03-2017 IPR020784 Ribosomal protein L11, N-terminal RG43_RS23790 8db149aa24ca533fb58ad37447a8e174 142 Gene3D G3DSA:3.30.1550.10 2 72 9.8E-38 T 09-03-2017 IPR020784 Ribosomal protein L11, N-terminal RG43_RS23790 8db149aa24ca533fb58ad37447a8e174 142 Gene3D G3DSA:1.10.10.250 73 141 1.5E-30 T 09-03-2017 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 RG43_RS23790 8db149aa24ca533fb58ad37447a8e174 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 09-03-2017 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS15485 27013a04266506bba53086bdd85a640e 1320 SUPERFAMILY SSF53720 656 1110 2.09E-124 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RG43_RS15485 27013a04266506bba53086bdd85a640e 1320 SUPERFAMILY SSF51730 262 618 7.06E-124 T 09-03-2017 IPR029041 FAD-linked oxidoreductase-like RG43_RS15485 27013a04266506bba53086bdd85a640e 1320 Gene3D G3DSA:3.40.605.10 654 897 5.2E-67 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RG43_RS15485 27013a04266506bba53086bdd85a640e 1320 Gene3D G3DSA:3.40.309.10 898 1090 2.1E-44 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RG43_RS15485 27013a04266506bba53086bdd85a640e 1320 Gene3D G3DSA:1.10.2060.10 142 260 3.5E-55 T 09-03-2017 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 RG43_RS15485 27013a04266506bba53086bdd85a640e 1320 Gene3D G3DSA:3.20.20.220 261 616 4.7E-122 T 09-03-2017 IPR029041 FAD-linked oxidoreductase-like RG43_RS15485 27013a04266506bba53086bdd85a640e 1320 Pfam PF01619 Proline dehydrogenase 270 569 7.0E-99 T 09-03-2017 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922 RG43_RS15485 27013a04266506bba53086bdd85a640e 1320 SUPERFAMILY SSF47598 3 45 3.11E-10 T 09-03-2017 IPR010985 Ribbon-helix-helix GO:0006355 RG43_RS15485 27013a04266506bba53086bdd85a640e 1320 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 148 259 3.1E-46 T 09-03-2017 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 RG43_RS15485 27013a04266506bba53086bdd85a640e 1320 PIRSF PIRSF000197 74 1320 0.0 T 09-03-2017 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 RG43_RS15485 27013a04266506bba53086bdd85a640e 1320 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 882 889 - T 09-03-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RG43_RS15485 27013a04266506bba53086bdd85a640e 1320 SUPERFAMILY SSF81935 88 261 5.1E-67 T 09-03-2017 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 RG43_RS15485 27013a04266506bba53086bdd85a640e 1320 Gene3D G3DSA:1.20.5.550 87 138 3.9E-26 T 09-03-2017 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 RG43_RS15485 27013a04266506bba53086bdd85a640e 1320 Pfam PF00171 Aldehyde dehydrogenase family 659 1105 3.5E-112 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RG43_RS15485 27013a04266506bba53086bdd85a640e 1320 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 610 1112 1.2E-262 T 09-03-2017 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 RG43_RS15485 27013a04266506bba53086bdd85a640e 1320 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 910 921 - T 09-03-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RG43_RS04650 ff03b505455d7f4ee484da6c368ac033 34 SUPERFAMILY SSF46689 1 33 1.97E-5 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS04650 ff03b505455d7f4ee484da6c368ac033 34 Pfam PF01527 Transposase 1 32 3.2E-10 T 09-03-2017 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RG43_RS04650 ff03b505455d7f4ee484da6c368ac033 34 Gene3D G3DSA:1.10.10.60 2 31 1.6E-7 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS26010 86494ab0a09fe2d9d86475cadad2d96a 206 SUPERFAMILY SSF53098 31 193 7.59E-40 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS26010 86494ab0a09fe2d9d86475cadad2d96a 206 Gene3D G3DSA:3.30.420.10 31 187 3.1E-40 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS26010 86494ab0a09fe2d9d86475cadad2d96a 206 Pfam PF00665 Integrase core domain 37 150 1.1E-27 T 09-03-2017 IPR001584 Integrase, catalytic core GO:0015074 RG43_RS03965 1bf06ba766642bf4d39b82ef4e63c1e6 223 SUPERFAMILY SSF158442 187 212 1.44E-31 T 09-03-2017 RG43_RS03965 1bf06ba766642bf4d39b82ef4e63c1e6 223 SUPERFAMILY SSF158442 28 157 1.44E-31 T 09-03-2017 RG43_RS03965 1bf06ba766642bf4d39b82ef4e63c1e6 223 Pfam PF02600 Disulfide bond formation protein DsbB 24 212 1.8E-40 T 09-03-2017 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 RG43_RS03965 1bf06ba766642bf4d39b82ef4e63c1e6 223 Gene3D G3DSA:1.20.1550.10 15 220 5.8E-62 T 09-03-2017 IPR023380 Disulphide bond formation protein DsbB-like domain RG43_RS03965 1bf06ba766642bf4d39b82ef4e63c1e6 223 Hamap MF_01311 Protein-disulfide oxidoreductase DsbI [dsbI]. 6 223 60.9 T 09-03-2017 IPR023792 Protein-disulfide oxidoreductase DsbI RG43_RS26340 1bf06ba766642bf4d39b82ef4e63c1e6 223 SUPERFAMILY SSF158442 187 212 1.44E-31 T 09-03-2017 RG43_RS26340 1bf06ba766642bf4d39b82ef4e63c1e6 223 SUPERFAMILY SSF158442 28 157 1.44E-31 T 09-03-2017 RG43_RS26340 1bf06ba766642bf4d39b82ef4e63c1e6 223 Pfam PF02600 Disulfide bond formation protein DsbB 24 212 1.8E-40 T 09-03-2017 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 RG43_RS26340 1bf06ba766642bf4d39b82ef4e63c1e6 223 Gene3D G3DSA:1.20.1550.10 15 220 5.8E-62 T 09-03-2017 IPR023380 Disulphide bond formation protein DsbB-like domain RG43_RS26340 1bf06ba766642bf4d39b82ef4e63c1e6 223 Hamap MF_01311 Protein-disulfide oxidoreductase DsbI [dsbI]. 6 223 60.9 T 09-03-2017 IPR023792 Protein-disulfide oxidoreductase DsbI RG43_RS25780 c93eed70f90e39f40c6ab4ab0093f573 29 TIGRFAM TIGR04459 TisB_tox: type I toxin-antitoxin system toxin TisB 1 29 1.1E-17 T 09-03-2017 IPR025211 Toxin TisB, type I toxin-antitoxin system GO:0005253|GO:0005887|GO:0009432|GO:0022611 RG43_RS25780 c93eed70f90e39f40c6ab4ab0093f573 29 Pfam PF13939 Toxin TisB, type I toxin-antitoxin system 1 28 4.4E-16 T 09-03-2017 IPR025211 Toxin TisB, type I toxin-antitoxin system GO:0005253|GO:0005887|GO:0009432|GO:0022611 RG43_RS23290 188e454442e276b26583c7288c3554ac 549 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 7 546 9.5E-257 T 09-03-2017 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 RG43_RS23290 188e454442e276b26583c7288c3554ac 549 Pfam PF00999 Sodium/hydrogen exchanger family 7 421 5.4E-78 T 09-03-2017 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 RG43_RS24940 5fdeb49715377be7dce6a49d19f1d68f 301 Pfam PF03466 LysR substrate binding domain 89 290 1.1E-24 T 09-03-2017 IPR005119 LysR, substrate-binding RG43_RS24940 5fdeb49715377be7dce6a49d19f1d68f 301 SUPERFAMILY SSF53850 89 291 2.53E-27 T 09-03-2017 RG43_RS24940 5fdeb49715377be7dce6a49d19f1d68f 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 3.6E-15 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS24940 5fdeb49715377be7dce6a49d19f1d68f 301 Gene3D G3DSA:3.40.190.10 186 261 2.5E-4 T 09-03-2017 RG43_RS24940 5fdeb49715377be7dce6a49d19f1d68f 301 Gene3D G3DSA:3.40.190.10 95 185 1.5E-5 T 09-03-2017 RG43_RS24940 5fdeb49715377be7dce6a49d19f1d68f 301 Gene3D G3DSA:1.10.10.10 7 82 1.7E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS24940 5fdeb49715377be7dce6a49d19f1d68f 301 SUPERFAMILY SSF46785 4 81 8.71E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS22535 273e37678fb63b2a391f0bbb8329799e 284 SUPERFAMILY SSF51658 21 275 2.09E-55 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain RG43_RS22535 273e37678fb63b2a391f0bbb8329799e 284 Pfam PF01261 Xylose isomerase-like TIM barrel 25 230 2.4E-33 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain RG43_RS22535 273e37678fb63b2a391f0bbb8329799e 284 TIGRFAM TIGR00542 hxl6Piso_put: putative hexulose-6-phosphate isomerase 4 281 4.9E-155 T 09-03-2017 IPR004560 L-ribulose-5-phosphate 3-epimerase GO:0005975|GO:0016861 KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961 RG43_RS22535 273e37678fb63b2a391f0bbb8329799e 284 Gene3D G3DSA:3.20.20.150 4 273 7.1E-50 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain RG43_RS22535 273e37678fb63b2a391f0bbb8329799e 284 Hamap MF_01951 L-ribulose-5-phosphate 3-epimerase UlaE [ulaE]. 1 284 82.292 T 09-03-2017 IPR023492 L-ribulose-5-phosphate 3-epimerase, Enterobacteriaceae GO:0034015 KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961 RG43_RS02430 fca3d6d18d398b02d8ecfea1adc85eee 177 SUPERFAMILY SSF56053 1 82 9.55E-24 T 09-03-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02430 fca3d6d18d398b02d8ecfea1adc85eee 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 4.3E-34 T 09-03-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RG43_RS02430 fca3d6d18d398b02d8ecfea1adc85eee 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 4.3E-34 T 09-03-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RG43_RS02430 fca3d6d18d398b02d8ecfea1adc85eee 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 4.3E-34 T 09-03-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RG43_RS02430 fca3d6d18d398b02d8ecfea1adc85eee 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 09-03-2017 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS02430 fca3d6d18d398b02d8ecfea1adc85eee 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.551 T 09-03-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RG43_RS02430 fca3d6d18d398b02d8ecfea1adc85eee 177 Pfam PF00347 Ribosomal protein L6 90 164 6.9E-19 T 09-03-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02430 fca3d6d18d398b02d8ecfea1adc85eee 177 Pfam PF00347 Ribosomal protein L6 11 82 1.0E-18 T 09-03-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02430 fca3d6d18d398b02d8ecfea1adc85eee 177 SUPERFAMILY SSF56053 83 177 1.1E-35 T 09-03-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02430 fca3d6d18d398b02d8ecfea1adc85eee 177 Gene3D G3DSA:3.90.930.12 83 177 2.4E-40 T 09-03-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02430 fca3d6d18d398b02d8ecfea1adc85eee 177 Gene3D G3DSA:3.90.930.12 2 82 7.5E-29 T 09-03-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02430 fca3d6d18d398b02d8ecfea1adc85eee 177 PIRSF PIRSF002162 1 177 6.4E-44 T 09-03-2017 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02430 fca3d6d18d398b02d8ecfea1adc85eee 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 5.5E-73 T 09-03-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RG43_RS01715 ebb53170606a348b7e6b3f6c96c87a3b 197 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 4 191 4.5E-31 T 09-03-2017 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 RG43_RS01715 ebb53170606a348b7e6b3f6c96c87a3b 197 Pfam PF01914 MarC family integral membrane protein 1 195 2.6E-65 T 09-03-2017 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 RG43_RS12720 e3bc3c3c0834444c01aa17078c383459 231 Gene3D G3DSA:3.40.50.300 2 212 6.0E-65 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS12720 e3bc3c3c0834444c01aa17078c383459 231 SUPERFAMILY SSF52540 1 213 5.69E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS12720 e3bc3c3c0834444c01aa17078c383459 231 PIRSF PIRSF006755 1 225 5.3E-63 T 09-03-2017 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 RG43_RS12720 e3bc3c3c0834444c01aa17078c383459 231 Pfam PF13500 AAA domain 4 207 1.0E-28 T 09-03-2017 RG43_RS12720 e3bc3c3c0834444c01aa17078c383459 231 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 172 1.4E-39 T 09-03-2017 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 RG43_RS12720 e3bc3c3c0834444c01aa17078c383459 231 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 220 23.964 T 09-03-2017 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 RG43_RS25415 8aa5523875d6f43ba583137b1e8cb515 152 Pfam PF13412 Winged helix-turn-helix DNA-binding 7 53 1.1E-13 T 09-03-2017 RG43_RS25415 8aa5523875d6f43ba583137b1e8cb515 152 Gene3D G3DSA:1.10.10.10 1 57 4.8E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS25415 8aa5523875d6f43ba583137b1e8cb515 152 ProSitePatterns PS00519 AsnC-type HTH domain signature. 24 50 - T 09-03-2017 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RG43_RS25415 8aa5523875d6f43ba583137b1e8cb515 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 5.7E-14 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RG43_RS25415 8aa5523875d6f43ba583137b1e8cb515 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 5.7E-14 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RG43_RS25415 8aa5523875d6f43ba583137b1e8cb515 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 5.7E-14 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RG43_RS25415 8aa5523875d6f43ba583137b1e8cb515 152 SUPERFAMILY SSF46785 4 66 1.06E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS25415 8aa5523875d6f43ba583137b1e8cb515 152 Pfam PF01037 Lrp/AsnC ligand binding domain 76 143 6.5E-18 T 09-03-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RG43_RS25415 8aa5523875d6f43ba583137b1e8cb515 152 Gene3D G3DSA:3.30.70.920 70 143 9.9E-23 T 09-03-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RG43_RS25415 8aa5523875d6f43ba583137b1e8cb515 152 SUPERFAMILY SSF54909 68 152 2.28E-19 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel RG43_RS25415 8aa5523875d6f43ba583137b1e8cb515 152 SMART SM00344 6 113 7.8E-45 T 09-03-2017 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 RG43_RS15855 79dc3760f9ad43fee2e7bfc899361047 635 SMART SM00382 344 514 4.3E-13 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS15855 79dc3760f9ad43fee2e7bfc899361047 635 SMART SM00382 28 230 7.5E-14 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS15855 79dc3760f9ad43fee2e7bfc899361047 635 SUPERFAMILY SSF52540 9 239 2.04E-50 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS15855 79dc3760f9ad43fee2e7bfc899361047 635 Pfam PF16326 ABC transporter C-terminal domain 561 630 3.1E-21 T 09-03-2017 IPR032524 ABC transporter Uup, C-terminal GO:0003677 RG43_RS15855 79dc3760f9ad43fee2e7bfc899361047 635 SUPERFAMILY SSF52540 311 501 5.08E-47 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS15855 79dc3760f9ad43fee2e7bfc899361047 635 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS15855 79dc3760f9ad43fee2e7bfc899361047 635 Pfam PF00005 ABC transporter 336 469 1.7E-24 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS15855 79dc3760f9ad43fee2e7bfc899361047 635 Pfam PF00005 ABC transporter 19 185 1.9E-22 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS15855 79dc3760f9ad43fee2e7bfc899361047 635 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS15855 79dc3760f9ad43fee2e7bfc899361047 635 Pfam PF12848 ABC transporter 224 294 1.1E-11 T 09-03-2017 IPR032781 ABC-transporter extension domain RG43_RS15855 79dc3760f9ad43fee2e7bfc899361047 635 Gene3D G3DSA:3.40.50.300 318 556 1.6E-49 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS15855 79dc3760f9ad43fee2e7bfc899361047 635 Gene3D G3DSA:3.40.50.300 2 270 1.7E-52 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS19595 7d0734f54a1b7a2cf2bdb32fc5b937b2 87 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 1.8E-18 T 09-03-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS19595 7d0734f54a1b7a2cf2bdb32fc5b937b2 87 SUPERFAMILY SSF143800 1 80 5.49E-22 T 09-03-2017 RG43_RS19595 7d0734f54a1b7a2cf2bdb32fc5b937b2 87 Pfam PF01197 Ribosomal protein L31 1 78 1.4E-25 T 09-03-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS19595 7d0734f54a1b7a2cf2bdb32fc5b937b2 87 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 29.111 T 09-03-2017 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS19595 7d0734f54a1b7a2cf2bdb32fc5b937b2 87 ProSitePatterns PS01143 Ribosomal protein L31 signature. 48 69 - T 09-03-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS19595 7d0734f54a1b7a2cf2bdb32fc5b937b2 87 PRINTS PR01249 Ribosomal protein L31 signature 44 59 1.1E-15 T 09-03-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS19595 7d0734f54a1b7a2cf2bdb32fc5b937b2 87 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.1E-15 T 09-03-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS19595 7d0734f54a1b7a2cf2bdb32fc5b937b2 87 PRINTS PR01249 Ribosomal protein L31 signature 59 77 1.1E-15 T 09-03-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS12265 cec23b87dbcb2822c751fda67bdbd9a6 69 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 69 5.0E-34 T 09-03-2017 RG43_RS12265 cec23b87dbcb2822c751fda67bdbd9a6 69 Pfam PF10965 Protein of unknown function (DUF2767) 1 67 1.7E-34 T 09-03-2017 IPR024493 Protein of unknown function DUF2767 RG43_RS17980 fd4a6d8675a2fc8528655396523c811d 461 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 58 441 1.4E-197 T 09-03-2017 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 RG43_RS17980 fd4a6d8675a2fc8528655396523c811d 461 Pfam PF03606 C4-dicarboxylate anaerobic carrier 6 451 5.5E-136 T 09-03-2017 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 RG43_RS14505 86d4300aad211795faf1879cd9a40a7f 207 Gene3D G3DSA:2.50.20.10 14 206 4.5E-71 T 09-03-2017 RG43_RS14505 86d4300aad211795faf1879cd9a40a7f 207 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 5 206 5.7E-99 T 09-03-2017 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 RG43_RS14505 86d4300aad211795faf1879cd9a40a7f 207 SUPERFAMILY SSF89392 31 206 2.75E-56 T 09-03-2017 IPR029046 Lipoprotein localisation LolA/LolB/LppX RG43_RS14505 86d4300aad211795faf1879cd9a40a7f 207 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 6 206 29.594 T 09-03-2017 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 RG43_RS14505 86d4300aad211795faf1879cd9a40a7f 207 Pfam PF03550 Outer membrane lipoprotein LolB 50 204 1.9E-49 T 09-03-2017 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 RG43_RS00345 340b4f985f39aaa15fea7ad27549f8b3 530 Pfam PF13817 IS66 C-terminal element 487 523 2.7E-14 T 09-03-2017 RG43_RS00345 340b4f985f39aaa15fea7ad27549f8b3 530 Pfam PF13005 zinc-finger binding domain of transposase IS66 131 175 2.8E-11 T 09-03-2017 IPR024474 Zinc-finger binding domain of transposase IS66 RG43_RS00345 340b4f985f39aaa15fea7ad27549f8b3 530 Pfam PF03050 Transposase IS66 family 190 479 1.1E-94 T 09-03-2017 IPR004291 Transposase, IS66 RG43_RS00345 340b4f985f39aaa15fea7ad27549f8b3 530 Pfam PF13007 Transposase C of IS166 homeodomain 53 123 1.8E-10 T 09-03-2017 IPR024463 Transposase TnpC, homeodomain RG43_RS10340 78346a776534425ab3b7650e8edc1a36 119 PIRSF PIRSF001007 1 119 3.4E-50 T 09-03-2017 IPR016281 Crossover junction endodeoxyribonuclease, RusA GO:0008821 RG43_RS10340 78346a776534425ab3b7650e8edc1a36 119 Pfam PF05866 Endodeoxyribonuclease RusA 8 112 3.1E-16 T 09-03-2017 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 RG43_RS10340 78346a776534425ab3b7650e8edc1a36 119 SUPERFAMILY SSF103084 1 116 1.96E-33 T 09-03-2017 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 RG43_RS10340 78346a776534425ab3b7650e8edc1a36 119 Gene3D G3DSA:3.30.1330.70 1 117 2.6E-40 T 09-03-2017 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 RG43_RS24155 8a56bfbc12f9b301174b33a9fc0c62ec 99 Gene3D G3DSA:3.30.70.860 23 99 5.5E-30 T 09-03-2017 RG43_RS24155 8a56bfbc12f9b301174b33a9fc0c62ec 99 Pfam PF04175 Protein of unknown function (DUF406) 5 96 3.5E-29 T 09-03-2017 IPR005272 Conserved hypothetical protein CHP00743 RG43_RS24155 8a56bfbc12f9b301174b33a9fc0c62ec 99 TIGRFAM TIGR00743 TIGR00743: conserved hypothetical protein 4 96 1.8E-38 T 09-03-2017 IPR005272 Conserved hypothetical protein CHP00743 RG43_RS20750 96e9d87c9fcaee31fdd7ea96bee71ccc 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 236 253 1.1E-58 T 09-03-2017 IPR008091 Ferrichrome-binding periplasmic protein RG43_RS20750 96e9d87c9fcaee31fdd7ea96bee71ccc 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 86 101 1.1E-58 T 09-03-2017 IPR008091 Ferrichrome-binding periplasmic protein RG43_RS20750 96e9d87c9fcaee31fdd7ea96bee71ccc 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 208 226 1.1E-58 T 09-03-2017 IPR008091 Ferrichrome-binding periplasmic protein RG43_RS20750 96e9d87c9fcaee31fdd7ea96bee71ccc 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 55 73 1.1E-58 T 09-03-2017 IPR008091 Ferrichrome-binding periplasmic protein RG43_RS20750 96e9d87c9fcaee31fdd7ea96bee71ccc 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 273 286 1.1E-58 T 09-03-2017 IPR008091 Ferrichrome-binding periplasmic protein RG43_RS20750 96e9d87c9fcaee31fdd7ea96bee71ccc 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 184 199 1.1E-58 T 09-03-2017 IPR008091 Ferrichrome-binding periplasmic protein RG43_RS20750 96e9d87c9fcaee31fdd7ea96bee71ccc 296 Pfam PF01497 Periplasmic binding protein 38 269 7.1E-27 T 09-03-2017 IPR002491 ABC transporter periplasmic binding domain GO:0005488 RG43_RS20750 96e9d87c9fcaee31fdd7ea96bee71ccc 296 Gene3D G3DSA:3.40.50.1980 34 120 1.2E-31 T 09-03-2017 RG43_RS20750 96e9d87c9fcaee31fdd7ea96bee71ccc 296 SUPERFAMILY SSF53807 34 291 4.71E-58 T 09-03-2017 RG43_RS20750 96e9d87c9fcaee31fdd7ea96bee71ccc 296 Gene3D G3DSA:3.40.50.1980 124 294 1.8E-64 T 09-03-2017 RG43_RS15915 30cac0e48cce846f75239272c2942413 870 SUPERFAMILY SSF55486 204 450 1.19E-75 T 09-03-2017 RG43_RS15915 30cac0e48cce846f75239272c2942413 870 SUPERFAMILY SSF63737 1 193 3.92E-46 T 09-03-2017 RG43_RS15915 30cac0e48cce846f75239272c2942413 870 Pfam PF01433 Peptidase family M1 105 384 3.6E-70 T 09-03-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RG43_RS15915 30cac0e48cce846f75239272c2942413 870 Gene3D G3DSA:1.25.50.10 547 870 3.0E-124 T 09-03-2017 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal RG43_RS15915 30cac0e48cce846f75239272c2942413 870 Pfam PF11940 Domain of unknown function (DUF3458) 459 827 2.9E-136 T 09-03-2017 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal RG43_RS15915 30cac0e48cce846f75239272c2942413 870 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 258 268 7.2E-9 T 09-03-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RG43_RS15915 30cac0e48cce846f75239272c2942413 870 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 176 191 7.2E-9 T 09-03-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RG43_RS15915 30cac0e48cce846f75239272c2942413 870 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 313 325 7.2E-9 T 09-03-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RG43_RS15915 30cac0e48cce846f75239272c2942413 870 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 126 141 7.2E-9 T 09-03-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RG43_RS15915 30cac0e48cce846f75239272c2942413 870 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 294 309 7.2E-9 T 09-03-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RG43_RS15915 30cac0e48cce846f75239272c2942413 870 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 869 0.0 T 09-03-2017 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 RG43_RS15915 30cac0e48cce846f75239272c2942413 870 Gene3D G3DSA:1.10.390.10 308 451 6.5E-36 T 09-03-2017 RG43_RS26900 f15fdd5f5eb8488087c32d278ee830d5 77 ProDom PD028015 PLASMID YKFF YDEA R0111 YPJI YPMT1.60C C4569 AEC70 PSLT067 YFJA 9 74 9.0E-34 T 09-03-2017 IPR009253 Protein of unknown function DUF905 RG43_RS26900 f15fdd5f5eb8488087c32d278ee830d5 77 Pfam PF06006 Bacterial protein of unknown function (DUF905) 8 74 3.3E-31 T 09-03-2017 IPR009253 Protein of unknown function DUF905 RG43_RS26900 f15fdd5f5eb8488087c32d278ee830d5 77 Gene3D G3DSA:3.30.160.130 5 77 2.2E-40 T 09-03-2017 RG43_RS26900 f15fdd5f5eb8488087c32d278ee830d5 77 SUPERFAMILY SSF54786 12 77 1.26E-31 T 09-03-2017 RG43_RS16210 13abf7ae711929ec9527383c3ce61ba9 371 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 362 1.3E-57 T 09-03-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RG43_RS16210 13abf7ae711929ec9527383c3ce61ba9 371 SUPERFAMILY SSF111369 52 299 9.02E-28 T 09-03-2017 RG43_RS16210 13abf7ae711929ec9527383c3ce61ba9 371 Gene3D G3DSA:2.40.50.100 61 94 3.1E-13 T 09-03-2017 RG43_RS16210 13abf7ae711929ec9527383c3ce61ba9 371 Gene3D G3DSA:2.40.50.100 183 214 3.1E-13 T 09-03-2017 RG43_RS16210 13abf7ae711929ec9527383c3ce61ba9 371 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 49 294 3.1E-17 T 09-03-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RG43_RS24185 fe6e2ab1c99cec3b84bbb49aec9320f9 329 Pfam PF13531 Bacterial extracellular solute-binding protein 44 280 8.5E-46 T 09-03-2017 RG43_RS24185 fe6e2ab1c99cec3b84bbb49aec9320f9 329 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 12 326 8.3E-192 T 09-03-2017 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 RG43_RS24185 fe6e2ab1c99cec3b84bbb49aec9320f9 329 SUPERFAMILY SSF53850 21 326 6.4E-93 T 09-03-2017 RG43_RS24185 fe6e2ab1c99cec3b84bbb49aec9320f9 329 Gene3D G3DSA:3.40.190.10 170 295 1.2E-33 T 09-03-2017 RG43_RS24185 fe6e2ab1c99cec3b84bbb49aec9320f9 329 Gene3D G3DSA:3.40.190.10 21 164 1.5E-50 T 09-03-2017 RG43_RS24185 fe6e2ab1c99cec3b84bbb49aec9320f9 329 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 145 153 - T 09-03-2017 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 RG43_RS24185 fe6e2ab1c99cec3b84bbb49aec9320f9 329 ProSitePatterns PS00401 Prokaryotic sulfate-binding proteins signature 1. 48 60 - T 09-03-2017 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 RG43_RS15625 22d6146a6f8fda166566b0ed2143ac0f 57 Pfam PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system 2 54 4.3E-35 T 09-03-2017 IPR012563 Gns RG43_RS08365 21d8ff428780cdd11b7ba572eabcfe16 445 SMART SM00928 336 381 4.3E-22 T 09-03-2017 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08365 21d8ff428780cdd11b7ba572eabcfe16 445 SUPERFAMILY SSF142984 248 330 1.44E-20 T 09-03-2017 RG43_RS08365 21d8ff428780cdd11b7ba572eabcfe16 445 SUPERFAMILY SSF140490 333 429 4.84E-32 T 09-03-2017 RG43_RS08365 21d8ff428780cdd11b7ba572eabcfe16 445 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 339 421 2.8E-26 T 09-03-2017 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08365 21d8ff428780cdd11b7ba572eabcfe16 445 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 174 189 - T 09-03-2017 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08365 21d8ff428780cdd11b7ba572eabcfe16 445 SUPERFAMILY SSF142019 16 246 8.89E-86 T 09-03-2017 RG43_RS08365 21d8ff428780cdd11b7ba572eabcfe16 445 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 349 360 - T 09-03-2017 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08365 21d8ff428780cdd11b7ba572eabcfe16 445 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 13 423 2.7E-205 T 09-03-2017 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08365 21d8ff428780cdd11b7ba572eabcfe16 445 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 54 226 4.2E-50 T 09-03-2017 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08365 21d8ff428780cdd11b7ba572eabcfe16 445 Pfam PF10531 SLBB domain 253 295 1.5E-6 T 09-03-2017 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS16205 d5d110f40d8023443c63ed2326722de7 648 Pfam PF02687 FtsX-like permease family 527 641 2.3E-20 T 09-03-2017 IPR003838 ABC transporter permease protein domain GO:0016020 RG43_RS16205 d5d110f40d8023443c63ed2326722de7 648 SUPERFAMILY SSF52540 4 227 2.54E-69 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16205 d5d110f40d8023443c63ed2326722de7 648 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS16205 d5d110f40d8023443c63ed2326722de7 648 Pfam PF12704 MacB-like periplasmic core domain 272 491 9.1E-41 T 09-03-2017 IPR025857 MacB-like periplasmic core domain RG43_RS16205 d5d110f40d8023443c63ed2326722de7 648 SMART SM00382 33 220 1.0E-15 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS16205 d5d110f40d8023443c63ed2326722de7 648 Gene3D G3DSA:3.40.50.300 2 224 4.6E-71 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16205 d5d110f40d8023443c63ed2326722de7 648 Pfam PF00005 ABC transporter 24 172 3.9E-31 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS08650 207f78a0af895c888342a8ec372d0e24 440 Pfam PF02667 Short chain fatty acid transporter 1 440 7.6E-231 T 09-03-2017 IPR006160 Short chain fatty acid transporter AtoE RG43_RS08650 207f78a0af895c888342a8ec372d0e24 440 TIGRFAM TIGR00366 TIGR00366: TIGR00366 family protein 4 428 1.0E-225 T 09-03-2017 IPR006161 Conserved hypothetical protein CHP00336 RG43_RS05280 bb250fe1de28f812dbd2bc4dccc5cd2e 326 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 187 252 4.9E-26 T 09-03-2017 IPR017703 YgfZ/GcvT conserved site RG43_RS05280 bb250fe1de28f812dbd2bc4dccc5cd2e 326 Pfam PF01571 Aminomethyltransferase folate-binding domain 31 135 4.1E-9 T 09-03-2017 IPR006222 Glycine cleavage T-protein-like, N-terminal RG43_RS05280 bb250fe1de28f812dbd2bc4dccc5cd2e 326 SUPERFAMILY SSF103025 6 242 7.06E-68 T 09-03-2017 RG43_RS05280 bb250fe1de28f812dbd2bc4dccc5cd2e 326 Gene3D G3DSA:3.30.70.1400 27 112 1.7E-34 T 09-03-2017 RG43_RS05280 bb250fe1de28f812dbd2bc4dccc5cd2e 326 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 321 49.689 T 09-03-2017 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 RG43_RS05280 bb250fe1de28f812dbd2bc4dccc5cd2e 326 SUPERFAMILY SSF101790 244 325 6.28E-26 T 09-03-2017 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain RG43_RS05050 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 263 276 7.6E-19 T 09-03-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RG43_RS05050 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 566 579 7.6E-19 T 09-03-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RG43_RS05050 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 124 142 7.6E-19 T 09-03-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RG43_RS05050 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 146 158 7.6E-19 T 09-03-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RG43_RS05050 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 357 376 7.6E-19 T 09-03-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RG43_RS05050 412624b5c1215b2bf08615145be9629f 658 SUPERFAMILY SSF51419 92 369 1.48E-67 T 09-03-2017 IPR029066 PLP-binding barrel RG43_RS05050 412624b5c1215b2bf08615145be9629f 658 Gene3D G3DSA:3.20.20.10 94 355 6.7E-61 T 09-03-2017 IPR029066 PLP-binding barrel RG43_RS05050 412624b5c1215b2bf08615145be9629f 658 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 99 368 8.0E-74 T 09-03-2017 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 RG43_RS05050 412624b5c1215b2bf08615145be9629f 658 PIRSF PIRSF001336 17 658 3.2E-257 T 09-03-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 RG43_RS05050 412624b5c1215b2bf08615145be9629f 658 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 124 142 - T 09-03-2017 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site RG43_RS05050 412624b5c1215b2bf08615145be9629f 658 SUPERFAMILY SSF50621 482 584 4.88E-7 T 09-03-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 RG43_RS05050 412624b5c1215b2bf08615145be9629f 658 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 391 585 3.4E-23 T 09-03-2017 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 RG43_RS05050 412624b5c1215b2bf08615145be9629f 658 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 301 314 - T 09-03-2017 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site RG43_RS05050 412624b5c1215b2bf08615145be9629f 658 Gene3D G3DSA:2.40.37.10 356 380 4.6E-12 T 09-03-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 RG43_RS05050 412624b5c1215b2bf08615145be9629f 658 Gene3D G3DSA:2.40.37.10 479 611 4.6E-12 T 09-03-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 RG43_RS05050 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01180 Arginine decarboxylase signature 488 509 1.7E-74 T 09-03-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 RG43_RS05050 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01180 Arginine decarboxylase signature 347 364 1.7E-74 T 09-03-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 RG43_RS05050 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01180 Arginine decarboxylase signature 196 217 1.7E-74 T 09-03-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 RG43_RS05050 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01180 Arginine decarboxylase signature 170 185 1.7E-74 T 09-03-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 RG43_RS05050 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01180 Arginine decarboxylase signature 220 242 1.7E-74 T 09-03-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 RG43_RS05050 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01180 Arginine decarboxylase signature 116 130 1.7E-74 T 09-03-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 RG43_RS05050 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01180 Arginine decarboxylase signature 566 587 1.7E-74 T 09-03-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 RG43_RS05050 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01180 Arginine decarboxylase signature 513 538 1.7E-74 T 09-03-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 RG43_RS05050 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01180 Arginine decarboxylase signature 92 107 1.7E-74 T 09-03-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 RG43_RS05050 412624b5c1215b2bf08615145be9629f 658 TIGRFAM TIGR01273 speA: arginine decarboxylase 31 656 1.5E-280 T 09-03-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 RG43_RS05050 412624b5c1215b2bf08615145be9629f 658 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 28 657 43.749 T 09-03-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 RG43_RS04730 42c8f14ce0bd31d77426ff2063960760 401 ProSitePatterns PS00216 Sugar transport proteins signature 1. 61 77 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RG43_RS04730 42c8f14ce0bd31d77426ff2063960760 401 PRINTS PR01035 Tetracycline resistance protein signature 101 122 1.2E-144 T 09-03-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RG43_RS04730 42c8f14ce0bd31d77426ff2063960760 401 PRINTS PR01035 Tetracycline resistance protein signature 74 98 1.2E-144 T 09-03-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RG43_RS04730 42c8f14ce0bd31d77426ff2063960760 401 PRINTS PR01035 Tetracycline resistance protein signature 246 266 1.2E-144 T 09-03-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RG43_RS04730 42c8f14ce0bd31d77426ff2063960760 401 PRINTS PR01035 Tetracycline resistance protein signature 334 357 1.2E-144 T 09-03-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RG43_RS04730 42c8f14ce0bd31d77426ff2063960760 401 PRINTS PR01035 Tetracycline resistance protein signature 274 295 1.2E-144 T 09-03-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RG43_RS04730 42c8f14ce0bd31d77426ff2063960760 401 PRINTS PR01035 Tetracycline resistance protein signature 43 62 1.2E-144 T 09-03-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RG43_RS04730 42c8f14ce0bd31d77426ff2063960760 401 PRINTS PR01035 Tetracycline resistance protein signature 14 30 1.2E-144 T 09-03-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RG43_RS04730 42c8f14ce0bd31d77426ff2063960760 401 PRINTS PR01035 Tetracycline resistance protein signature 364 383 1.2E-144 T 09-03-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RG43_RS04730 42c8f14ce0bd31d77426ff2063960760 401 PRINTS PR01035 Tetracycline resistance protein signature 299 319 1.2E-144 T 09-03-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RG43_RS04730 42c8f14ce0bd31d77426ff2063960760 401 PRINTS PR01035 Tetracycline resistance protein signature 131 153 1.2E-144 T 09-03-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RG43_RS04730 42c8f14ce0bd31d77426ff2063960760 401 PRINTS PR01035 Tetracycline resistance protein signature 159 179 1.2E-144 T 09-03-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RG43_RS04730 42c8f14ce0bd31d77426ff2063960760 401 PRINTS PR01035 Tetracycline resistance protein signature 217 234 1.2E-144 T 09-03-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RG43_RS04730 42c8f14ce0bd31d77426ff2063960760 401 SUPERFAMILY SSF103473 7 392 7.06E-57 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS04730 42c8f14ce0bd31d77426ff2063960760 401 Gene3D G3DSA:1.20.1250.20 209 389 1.2E-14 T 09-03-2017 RG43_RS04730 42c8f14ce0bd31d77426ff2063960760 401 Gene3D G3DSA:1.20.1250.20 7 187 2.4E-37 T 09-03-2017 RG43_RS04730 42c8f14ce0bd31d77426ff2063960760 401 Pfam PF07690 Major Facilitator Superfamily 9 350 7.3E-45 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS26110 acc9441cb6790d5f2bfa98cd93a558b9 367 Pfam PF13166 AAA domain 101 342 6.7E-16 T 09-03-2017 IPR026866 P-loop containing protein CR006/PrrC RG43_RS03735 acc9441cb6790d5f2bfa98cd93a558b9 367 Pfam PF13166 AAA domain 101 342 6.7E-16 T 09-03-2017 IPR026866 P-loop containing protein CR006/PrrC RG43_RS03890 1fa0c4b5abb157615d85a77df336a498 412 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 47.067 T 09-03-2017 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 RG43_RS03890 1fa0c4b5abb157615d85a77df336a498 412 Gene3D G3DSA:1.10.3090.10 122 359 7.6E-57 T 09-03-2017 RG43_RS03890 1fa0c4b5abb157615d85a77df336a498 412 Pfam PF01743 Poly A polymerase head domain 3 122 1.1E-18 T 09-03-2017 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 RG43_RS03890 1fa0c4b5abb157615d85a77df336a498 412 Pfam PF01966 HD domain 229 328 3.1E-12 T 09-03-2017 IPR006674 HD domain RG43_RS03890 1fa0c4b5abb157615d85a77df336a498 412 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 150 212 9.5E-16 T 09-03-2017 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 RG43_RS03890 1fa0c4b5abb157615d85a77df336a498 412 PIRSF PIRSF000813 1 408 8.6E-208 T 09-03-2017 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 RG43_RS03890 1fa0c4b5abb157615d85a77df336a498 412 Gene3D G3DSA:3.30.460.10 2 121 1.3E-31 T 09-03-2017 RG43_RS03890 1fa0c4b5abb157615d85a77df336a498 412 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 407 54.691 T 09-03-2017 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 RG43_RS03890 1fa0c4b5abb157615d85a77df336a498 412 SUPERFAMILY SSF81301 2 119 2.4E-32 T 09-03-2017 RG43_RS03890 1fa0c4b5abb157615d85a77df336a498 412 SUPERFAMILY SSF81891 120 403 2.62E-55 T 09-03-2017 RG43_RS26265 1fa0c4b5abb157615d85a77df336a498 412 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 47.067 T 09-03-2017 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 RG43_RS26265 1fa0c4b5abb157615d85a77df336a498 412 Gene3D G3DSA:1.10.3090.10 122 359 7.6E-57 T 09-03-2017 RG43_RS26265 1fa0c4b5abb157615d85a77df336a498 412 Pfam PF01743 Poly A polymerase head domain 3 122 1.1E-18 T 09-03-2017 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 RG43_RS26265 1fa0c4b5abb157615d85a77df336a498 412 Pfam PF01966 HD domain 229 328 3.1E-12 T 09-03-2017 IPR006674 HD domain RG43_RS26265 1fa0c4b5abb157615d85a77df336a498 412 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 150 212 9.5E-16 T 09-03-2017 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 RG43_RS26265 1fa0c4b5abb157615d85a77df336a498 412 PIRSF PIRSF000813 1 408 8.6E-208 T 09-03-2017 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 RG43_RS26265 1fa0c4b5abb157615d85a77df336a498 412 Gene3D G3DSA:3.30.460.10 2 121 1.3E-31 T 09-03-2017 RG43_RS26265 1fa0c4b5abb157615d85a77df336a498 412 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 407 54.691 T 09-03-2017 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 RG43_RS26265 1fa0c4b5abb157615d85a77df336a498 412 SUPERFAMILY SSF81301 2 119 2.4E-32 T 09-03-2017 RG43_RS26265 1fa0c4b5abb157615d85a77df336a498 412 SUPERFAMILY SSF81891 120 403 2.62E-55 T 09-03-2017 RG43_RS17380 e7d1fcbc78938f9ff5476c58816c821b 405 SUPERFAMILY SSF52777 175 404 3.78E-90 T 09-03-2017 RG43_RS17380 e7d1fcbc78938f9ff5476c58816c821b 405 Gene3D G3DSA:2.40.50.100 1 96 7.6E-26 T 09-03-2017 RG43_RS17380 e7d1fcbc78938f9ff5476c58816c821b 405 Pfam PF02817 e3 binding domain 114 147 2.4E-12 T 09-03-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 RG43_RS17380 e7d1fcbc78938f9ff5476c58816c821b 405 Pfam PF00364 Biotin-requiring enzyme 5 76 4.2E-17 T 09-03-2017 IPR000089 Biotin/lipoyl attachment RG43_RS17380 e7d1fcbc78938f9ff5476c58816c821b 405 Gene3D G3DSA:4.10.320.10 114 152 3.6E-20 T 09-03-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 RG43_RS17380 e7d1fcbc78938f9ff5476c58816c821b 405 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 175 403 1.9E-82 T 09-03-2017 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 RG43_RS17380 e7d1fcbc78938f9ff5476c58816c821b 405 SUPERFAMILY SSF47005 106 151 1.83E-11 T 09-03-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 RG43_RS17380 e7d1fcbc78938f9ff5476c58816c821b 405 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 405 6.5E-196 T 09-03-2017 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 RG43_RS17380 e7d1fcbc78938f9ff5476c58816c821b 405 SUPERFAMILY SSF51230 2 95 3.14E-24 T 09-03-2017 IPR011053 Single hybrid motif RG43_RS17380 e7d1fcbc78938f9ff5476c58816c821b 405 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 09-03-2017 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 RG43_RS17380 e7d1fcbc78938f9ff5476c58816c821b 405 Gene3D G3DSA:3.30.559.10 165 403 1.7E-92 T 09-03-2017 IPR023213 Chloramphenicol acetyltransferase-like domain Reactome: R-HSA-389661 RG43_RS06670 2ada1d8c9a5eb60c0809f05c5353ff39 255 SUPERFAMILY SSF75217 1 247 4.71E-103 T 09-03-2017 IPR029028 Alpha/beta knot methyltransferases RG43_RS06670 2ada1d8c9a5eb60c0809f05c5353ff39 255 PIRSF PIRSF000386 1 253 6.4E-105 T 09-03-2017 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RG43_RS06670 2ada1d8c9a5eb60c0809f05c5353ff39 255 Gene3D G3DSA:1.10.1270.20 161 251 3.3E-38 T 09-03-2017 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RG43_RS06670 2ada1d8c9a5eb60c0809f05c5353ff39 255 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 234 3.5E-113 T 09-03-2017 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RG43_RS06670 2ada1d8c9a5eb60c0809f05c5353ff39 255 Gene3D G3DSA:3.40.1280.10 1 160 5.7E-68 T 09-03-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RG43_RS06670 2ada1d8c9a5eb60c0809f05c5353ff39 255 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 2.6E-73 T 09-03-2017 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RG43_RS06670 2ada1d8c9a5eb60c0809f05c5353ff39 255 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 255 122.122 T 09-03-2017 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RG43_RS11310 bac333ded8248313c63bab0e4918ca01 392 Gene3D G3DSA:3.30.1490.20 123 199 5.2E-28 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RG43_RS11310 bac333ded8248313c63bab0e4918ca01 392 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 14 391 8.6E-196 T 09-03-2017 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 RG43_RS11310 bac333ded8248313c63bab0e4918ca01 392 Pfam PF02222 ATP-grasp domain 123 295 2.9E-57 T 09-03-2017 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type RG43_RS11310 bac333ded8248313c63bab0e4918ca01 392 Gene3D G3DSA:3.40.50.20 5 120 2.1E-41 T 09-03-2017 IPR016185 Pre-ATP-grasp domain RG43_RS11310 bac333ded8248313c63bab0e4918ca01 392 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 8 391 52.512 T 09-03-2017 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 RG43_RS11310 bac333ded8248313c63bab0e4918ca01 392 Gene3D G3DSA:3.30.470.20 200 388 2.0E-68 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RG43_RS11310 bac333ded8248313c63bab0e4918ca01 392 SUPERFAMILY SSF56059 113 314 5.83E-56 T 09-03-2017 RG43_RS11310 bac333ded8248313c63bab0e4918ca01 392 SUPERFAMILY SSF52440 3 112 1.35E-36 T 09-03-2017 IPR016185 Pre-ATP-grasp domain RG43_RS11310 bac333ded8248313c63bab0e4918ca01 392 SUPERFAMILY SSF51246 319 391 1.73E-19 T 09-03-2017 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RG43_RS03370 994df575ca9a00e2f723808a842887e5 329 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 49 62 - T 09-03-2017 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 RG43_RS03370 994df575ca9a00e2f723808a842887e5 329 SUPERFAMILY SSF53686 11 321 1.31E-93 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RG43_RS03370 994df575ca9a00e2f723808a842887e5 329 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 28 323 7.0E-116 T 09-03-2017 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 RG43_RS03370 994df575ca9a00e2f723808a842887e5 329 Gene3D G3DSA:3.40.50.1100 76 323 1.5E-76 T 09-03-2017 RG43_RS03370 994df575ca9a00e2f723808a842887e5 329 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 25 312 4.9E-78 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RG43_RS05485 063e46f12a56c2cb6f355adeb1da251b 253 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 6 253 4.2E-138 T 09-03-2017 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.12+1.1.1.127|MetaCyc: PWY-5515|MetaCyc: PWY-6507|MetaCyc: PWY-7562 RG43_RS05485 063e46f12a56c2cb6f355adeb1da251b 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RG43_RS05485 063e46f12a56c2cb6f355adeb1da251b 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 250 2.0E-56 T 09-03-2017 RG43_RS05485 063e46f12a56c2cb6f355adeb1da251b 253 SUPERFAMILY SSF51735 9 252 8.57E-77 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS05485 063e46f12a56c2cb6f355adeb1da251b 253 Gene3D G3DSA:3.40.50.720 6 252 4.3E-82 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS05485 063e46f12a56c2cb6f355adeb1da251b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.1E-39 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS05485 063e46f12a56c2cb6f355adeb1da251b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.1E-39 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS05485 063e46f12a56c2cb6f355adeb1da251b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.1E-39 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS05485 063e46f12a56c2cb6f355adeb1da251b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 1.1E-39 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS05485 063e46f12a56c2cb6f355adeb1da251b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.1E-39 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS05485 063e46f12a56c2cb6f355adeb1da251b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.1E-39 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS05485 063e46f12a56c2cb6f355adeb1da251b 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 2.7E-13 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS05485 063e46f12a56c2cb6f355adeb1da251b 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 2.7E-13 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS05485 063e46f12a56c2cb6f355adeb1da251b 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 2.7E-13 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS22670 f74bc78d97e23d8c63bdd44048bd225c 316 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 12 300 7.4E-126 T 09-03-2017 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 RG43_RS22670 f74bc78d97e23d8c63bdd44048bd225c 316 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 12 309 29.926 T 09-03-2017 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 RG43_RS22670 f74bc78d97e23d8c63bdd44048bd225c 316 Gene3D G3DSA:1.10.287.890 207 289 6.8E-35 T 09-03-2017 RG43_RS22670 f74bc78d97e23d8c63bdd44048bd225c 316 SUPERFAMILY SSF52540 13 157 7.56E-18 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS22670 f74bc78d97e23d8c63bdd44048bd225c 316 Gene3D G3DSA:3.40.50.300 10 178 3.8E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS22670 f74bc78d97e23d8c63bdd44048bd225c 316 Pfam PF01715 IPP transferase 46 290 5.9E-86 T 09-03-2017 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 RG43_RS00300 386c2b7285ef7586c0c6190a5ad91325 438 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 140 157 - T 09-03-2017 IPR006061 Solute-binding family 1, conserved site GO:0005215|GO:0006810 RG43_RS00300 386c2b7285ef7586c0c6190a5ad91325 438 Gene3D G3DSA:3.40.190.10 145 345 2.9E-42 T 09-03-2017 RG43_RS00300 386c2b7285ef7586c0c6190a5ad91325 438 SUPERFAMILY SSF53850 25 425 1.49E-77 T 09-03-2017 RG43_RS00300 386c2b7285ef7586c0c6190a5ad91325 438 Pfam PF13416 Bacterial extracellular solute-binding protein 44 367 1.6E-45 T 09-03-2017 RG43_RS15495 7e420c5412bd14d09ee1c823c17ae1f5 382 Pfam PF00296 Luciferase-like monooxygenase 20 339 9.7E-70 T 09-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RG43_RS15495 7e420c5412bd14d09ee1c823c17ae1f5 382 Gene3D G3DSA:3.20.20.30 20 371 8.5E-89 T 09-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RG43_RS15495 7e420c5412bd14d09ee1c823c17ae1f5 382 SUPERFAMILY SSF51679 20 371 3.09E-79 T 09-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RG43_RS15495 7e420c5412bd14d09ee1c823c17ae1f5 382 Hamap MF_01699 Pyrimidine monooxygenase RutA [rutA]. 20 379 70.711 T 09-03-2017 IPR019914 Pyrimidine monooxygenase RutA GO:0004497|GO:0006212|GO:0055114 KEGG: 00240+1.14.99.46 RG43_RS15495 7e420c5412bd14d09ee1c823c17ae1f5 382 TIGRFAM TIGR03612 RutA: pyrimidine utilization protein A 20 373 4.9E-219 T 09-03-2017 IPR019914 Pyrimidine monooxygenase RutA GO:0004497|GO:0006212|GO:0055114 KEGG: 00240+1.14.99.46 RG43_RS07370 b3550340b861a18dbbd2e853824eb6ea 237 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 234 28.976 T 09-03-2017 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RG43_RS07370 b3550340b861a18dbbd2e853824eb6ea 237 Gene3D G3DSA:3.30.470.20 94 219 2.4E-50 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RG43_RS07370 b3550340b861a18dbbd2e853824eb6ea 237 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 235 7.4E-86 T 09-03-2017 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 RG43_RS07370 b3550340b861a18dbbd2e853824eb6ea 237 Pfam PF01259 SAICAR synthetase 6 230 1.5E-57 T 09-03-2017 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RG43_RS07370 b3550340b861a18dbbd2e853824eb6ea 237 SUPERFAMILY SSF56104 3 232 9.81E-76 T 09-03-2017 RG43_RS07370 b3550340b861a18dbbd2e853824eb6ea 237 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 09-03-2017 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RG43_RS07370 b3550340b861a18dbbd2e853824eb6ea 237 Gene3D G3DSA:3.30.200.20 7 93 3.4E-32 T 09-03-2017 RG43_RS07370 b3550340b861a18dbbd2e853824eb6ea 237 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 09-03-2017 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RG43_RS18005 2bf4dbadb6f030f580754e5d6a4776b1 302 PIRSF PIRSF015582 1 302 1.0E-75 T 09-03-2017 IPR011206 Citrate lyase beta subunit-like RG43_RS18005 2bf4dbadb6f030f580754e5d6a4776b1 302 TIGRFAM TIGR01588 citE: citrate (pro-3S)-lyase, beta subunit 12 299 1.7E-136 T 09-03-2017 IPR006475 Citrate lyase, beta subunit, bacteria GO:0005737|GO:0006084|GO:0008816|GO:0009346 KEGG: 00720+4.1.3.34|MetaCyc: PWY-5392|MetaCyc: PWY-6038 RG43_RS18005 2bf4dbadb6f030f580754e5d6a4776b1 302 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 15 234 1.9E-83 T 09-03-2017 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 RG43_RS18005 2bf4dbadb6f030f580754e5d6a4776b1 302 Gene3D G3DSA:3.20.20.60 9 245 1.8E-73 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RG43_RS18005 2bf4dbadb6f030f580754e5d6a4776b1 302 SUPERFAMILY SSF51621 11 244 6.28E-62 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RG43_RS17865 ae1d545cb15875a89b531e484d1aab2d 860 SUPERFAMILY SSF52374 416 668 3.42E-140 T 09-03-2017 RG43_RS17865 ae1d545cb15875a89b531e484d1aab2d 860 SUPERFAMILY SSF52374 5 226 3.42E-140 T 09-03-2017 RG43_RS17865 ae1d545cb15875a89b531e484d1aab2d 860 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 859 23.303 T 09-03-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 RG43_RS17865 ae1d545cb15875a89b531e484d1aab2d 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 4.1E-52 T 09-03-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 RG43_RS17865 ae1d545cb15875a89b531e484d1aab2d 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 4.1E-52 T 09-03-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 RG43_RS17865 ae1d545cb15875a89b531e484d1aab2d 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 4.1E-52 T 09-03-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 RG43_RS17865 ae1d545cb15875a89b531e484d1aab2d 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 557 567 4.1E-52 T 09-03-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 RG43_RS17865 ae1d545cb15875a89b531e484d1aab2d 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 4.1E-52 T 09-03-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 RG43_RS17865 ae1d545cb15875a89b531e484d1aab2d 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 4.1E-52 T 09-03-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 RG43_RS17865 ae1d545cb15875a89b531e484d1aab2d 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 524 546 4.1E-52 T 09-03-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 RG43_RS17865 ae1d545cb15875a89b531e484d1aab2d 860 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 859 0.0 T 09-03-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 RG43_RS17865 ae1d545cb15875a89b531e484d1aab2d 860 Pfam PF08264 Anticodon-binding domain of tRNA 701 821 7.0E-17 T 09-03-2017 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 RG43_RS17865 ae1d545cb15875a89b531e484d1aab2d 860 Gene3D G3DSA:1.10.730.10 648 795 2.5E-45 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS17865 ae1d545cb15875a89b531e484d1aab2d 860 SUPERFAMILY SSF47323 662 859 5.05E-38 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS17865 ae1d545cb15875a89b531e484d1aab2d 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 16 171 6.1E-26 T 09-03-2017 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS17865 ae1d545cb15875a89b531e484d1aab2d 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 417 572 2.2E-7 T 09-03-2017 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS17865 ae1d545cb15875a89b531e484d1aab2d 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 619 651 1.2E-6 T 09-03-2017 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS17865 ae1d545cb15875a89b531e484d1aab2d 860 Gene3D G3DSA:3.90.740.10 223 424 7.8E-62 T 09-03-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 RG43_RS17865 ae1d545cb15875a89b531e484d1aab2d 860 SUPERFAMILY SSF50677 226 415 1.15E-57 T 09-03-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 RG43_RS17865 ae1d545cb15875a89b531e484d1aab2d 860 Gene3D G3DSA:3.40.50.620 618 647 3.5E-151 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS17865 ae1d545cb15875a89b531e484d1aab2d 860 Gene3D G3DSA:3.40.50.620 4 222 3.5E-151 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS17865 ae1d545cb15875a89b531e484d1aab2d 860 Gene3D G3DSA:3.40.50.620 425 573 3.5E-151 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS17865 ae1d545cb15875a89b531e484d1aab2d 860 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 403 4.0E-79 T 09-03-2017 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 RG43_RS17865 ae1d545cb15875a89b531e484d1aab2d 860 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 09-03-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS16900 181513930e447feffa995ebc47a40520 117 ProDom PD031229 PROPHAGE HEAD-TAIL JOINING CAPSID TAIL ATTACHMENT MINOR GIFSY-1 FII CP-933X 1 117 7.0E-62 T 09-03-2017 IPR008018 Bacteriophage tail attachment protein FII GO:0019028|GO:0019068 RG43_RS16900 181513930e447feffa995ebc47a40520 117 Gene3D G3DSA:2.40.10.180 2 116 5.1E-54 T 09-03-2017 IPR008018 Bacteriophage tail attachment protein FII GO:0019028|GO:0019068 RG43_RS16900 181513930e447feffa995ebc47a40520 117 Pfam PF05354 Phage Head-Tail Attachment 2 117 1.6E-67 T 09-03-2017 IPR008018 Bacteriophage tail attachment protein FII GO:0019028|GO:0019068 RG43_RS16900 181513930e447feffa995ebc47a40520 117 SUPERFAMILY SSF69279 2 117 2.3E-57 T 09-03-2017 RG43_RS02200 b10c088164418700fd647512829d2829 183 Pfam PF02525 Flavodoxin-like fold 6 171 2.8E-39 T 09-03-2017 IPR003680 Flavodoxin-like fold RG43_RS02200 b10c088164418700fd647512829d2829 183 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 1 182 48.312 T 09-03-2017 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 RG43_RS02200 b10c088164418700fd647512829d2829 183 Gene3D G3DSA:3.40.50.360 6 176 2.8E-45 T 09-03-2017 IPR029039 Flavoprotein-like domain RG43_RS02200 b10c088164418700fd647512829d2829 183 SUPERFAMILY SSF52218 5 176 1.4E-45 T 09-03-2017 IPR029039 Flavoprotein-like domain RG43_RS08220 ff72e6c4d0b3faf9e08816a9063573e7 189 Gene3D G3DSA:3.40.50.1950 2 188 1.1E-77 T 09-03-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 RG43_RS08220 ff72e6c4d0b3faf9e08816a9063573e7 189 Pfam PF02441 Flavoprotein 2 127 1.6E-26 T 09-03-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 RG43_RS08220 ff72e6c4d0b3faf9e08816a9063573e7 189 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 2 188 37.073 T 09-03-2017 IPR004507 Flavin prenyltransferase UbiX/Pad1 RG43_RS08220 ff72e6c4d0b3faf9e08816a9063573e7 189 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 3 186 2.0E-70 T 09-03-2017 IPR004507 Flavin prenyltransferase UbiX/Pad1 RG43_RS08220 ff72e6c4d0b3faf9e08816a9063573e7 189 SUPERFAMILY SSF52507 2 186 1.83E-59 T 09-03-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 RG43_RS03190 6ee066432ea986d3530ba05476346910 174 Gene3D G3DSA:3.30.1050.10 58 135 3.1E-12 T 09-03-2017 IPR003033 SCP2 sterol-binding domain RG43_RS03190 6ee066432ea986d3530ba05476346910 174 SUPERFAMILY SSF55718 42 137 5.42E-22 T 09-03-2017 IPR003033 SCP2 sterol-binding domain RG43_RS03190 6ee066432ea986d3530ba05476346910 174 PIRSF PIRSF025550 1 173 1.9E-83 T 09-03-2017 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT RG43_RS03190 6ee066432ea986d3530ba05476346910 174 Pfam PF02036 SCP-2 sterol transfer family 45 133 1.4E-17 T 09-03-2017 IPR003033 SCP2 sterol-binding domain RG43_RS03140 85d82584bc67014d3c63ee6ceabd5751 89 Pfam PF00312 Ribosomal protein S15 9 88 2.2E-38 T 09-03-2017 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS03140 85d82584bc67014d3c63ee6ceabd5751 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 22.443 T 09-03-2017 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS03140 85d82584bc67014d3c63ee6ceabd5751 89 Gene3D G3DSA:1.10.287.10 3 89 1.0E-39 T 09-03-2017 IPR009068 S15/NS1, RNA-binding RG43_RS03140 85d82584bc67014d3c63ee6ceabd5751 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 6.0E-40 T 09-03-2017 RG43_RS03140 85d82584bc67014d3c63ee6ceabd5751 89 SMART SM01387 8 88 1.8E-52 T 09-03-2017 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS03140 85d82584bc67014d3c63ee6ceabd5751 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 09-03-2017 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS03140 85d82584bc67014d3c63ee6ceabd5751 89 SUPERFAMILY SSF47060 3 89 1.71E-35 T 09-03-2017 IPR009068 S15/NS1, RNA-binding RG43_RS03140 85d82584bc67014d3c63ee6ceabd5751 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 5.7E-41 T 09-03-2017 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS06585 e8399b5197315d9e2e4d7c45622a097b 422 Gene3D G3DSA:3.30.9.10 86 137 2.8E-11 T 09-03-2017 RG43_RS06585 e8399b5197315d9e2e4d7c45622a097b 422 SUPERFAMILY SSF51905 1 286 7.34E-52 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS06585 e8399b5197315d9e2e4d7c45622a097b 422 Gene3D G3DSA:3.50.50.60 138 246 5.7E-33 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS06585 e8399b5197315d9e2e4d7c45622a097b 422 Gene3D G3DSA:3.50.50.60 1 84 5.7E-33 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS06585 e8399b5197315d9e2e4d7c45622a097b 422 Hamap MF_00990 L-2-hydroxyglutarate oxidase LhgO [lhgO]. 1 422 87.267 T 09-03-2017 IPR030862 L-2-hydroxyglutarate oxidase LhgO GO:0034419 KEGG: 00630+1.1.3.15|MetaCyc: PWY-181 RG43_RS06585 e8399b5197315d9e2e4d7c45622a097b 422 Pfam PF01266 FAD dependent oxidoreductase 3 390 8.5E-75 T 09-03-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RG43_RS23065 896cd7ed0369be192220153b1aff2c72 338 Gene3D G3DSA:3.40.190.10 131 221 1.2E-11 T 09-03-2017 RG43_RS23065 896cd7ed0369be192220153b1aff2c72 338 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 3 254 1.7E-94 T 09-03-2017 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 RG43_RS23065 896cd7ed0369be192220153b1aff2c72 338 SUPERFAMILY SSF53850 54 244 1.68E-44 T 09-03-2017 RG43_RS23065 896cd7ed0369be192220153b1aff2c72 338 Gene3D G3DSA:3.40.190.10 55 130 1.1E-4 T 09-03-2017 RG43_RS23065 896cd7ed0369be192220153b1aff2c72 338 TIGRFAM TIGR03431 PhnD: phosphonate ABC transporter, periplasmic phosphonate binding protein 1 291 2.5E-113 T 09-03-2017 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein GO:0015604|GO:0015716|GO:0043190 RG43_RS23065 896cd7ed0369be192220153b1aff2c72 338 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 35 277 4.7E-71 T 09-03-2017 RG43_RS24470 9e71ef30250506bc1c3f562cf2a01aa6 206 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 89 1.4E-33 T 09-03-2017 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 RG43_RS24470 9e71ef30250506bc1c3f562cf2a01aa6 206 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 96 201 2.0E-40 T 09-03-2017 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 RG43_RS24470 9e71ef30250506bc1c3f562cf2a01aa6 206 Gene3D G3DSA:1.10.287.990 20 90 2.6E-32 T 09-03-2017 RG43_RS24470 9e71ef30250506bc1c3f562cf2a01aa6 206 SUPERFAMILY SSF46609 1 90 7.59E-37 T 09-03-2017 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 RG43_RS24470 9e71ef30250506bc1c3f562cf2a01aa6 206 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 2.7E-27 T 09-03-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 RG43_RS24470 9e71ef30250506bc1c3f562cf2a01aa6 206 PRINTS PR01703 Manganese superoxide dismutase signature 124 132 2.7E-27 T 09-03-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 RG43_RS24470 9e71ef30250506bc1c3f562cf2a01aa6 206 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 2.7E-27 T 09-03-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 RG43_RS24470 9e71ef30250506bc1c3f562cf2a01aa6 206 PRINTS PR01703 Manganese superoxide dismutase signature 73 86 2.7E-27 T 09-03-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 RG43_RS24470 9e71ef30250506bc1c3f562cf2a01aa6 206 PRINTS PR01703 Manganese superoxide dismutase signature 166 178 2.7E-27 T 09-03-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 RG43_RS24470 9e71ef30250506bc1c3f562cf2a01aa6 206 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 168 175 - T 09-03-2017 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 RG43_RS24470 9e71ef30250506bc1c3f562cf2a01aa6 206 PIRSF PIRSF000349 1 206 5.3E-80 T 09-03-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 RG43_RS24470 9e71ef30250506bc1c3f562cf2a01aa6 206 SUPERFAMILY SSF54719 95 204 7.07E-45 T 09-03-2017 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 RG43_RS12985 4140cfc4a63be0b53f2f8e900c6a75b4 59 SUPERFAMILY SSF51126 4 53 7.22E-9 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor RG43_RS12985 4140cfc4a63be0b53f2f8e900c6a75b4 59 Gene3D G3DSA:2.160.20.20 2 51 3.1E-11 T 09-03-2017 IPR012332 P22 tailspike C-terminal domain-like RG43_RS12985 4140cfc4a63be0b53f2f8e900c6a75b4 59 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 6 52 1.8E-10 T 09-03-2017 IPR006315 Outer membrane autotransporter barrel GO:0019867 RG43_RS25495 389ecaf9d90b32d9086f725e7e6ec390 243 Gene3D G3DSA:2.60.40.1070 162 239 3.2E-22 T 09-03-2017 IPR016148 Pili assembly chaperone, C-terminal RG43_RS25495 389ecaf9d90b32d9086f725e7e6ec390 243 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 38 158 7.0E-38 T 09-03-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 RG43_RS25495 389ecaf9d90b32d9086f725e7e6ec390 243 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 181 236 8.3E-10 T 09-03-2017 IPR016148 Pili assembly chaperone, C-terminal RG43_RS25495 389ecaf9d90b32d9086f725e7e6ec390 243 SUPERFAMILY SSF49354 35 158 4.14E-37 T 09-03-2017 IPR008962 PapD-like RG43_RS25495 389ecaf9d90b32d9086f725e7e6ec390 243 SUPERFAMILY SSF49584 152 238 5.89E-21 T 09-03-2017 IPR016148 Pili assembly chaperone, C-terminal RG43_RS25495 389ecaf9d90b32d9086f725e7e6ec390 243 Gene3D G3DSA:2.60.40.360 38 158 1.5E-41 T 09-03-2017 IPR008962 PapD-like RG43_RS25495 389ecaf9d90b32d9086f725e7e6ec390 243 PRINTS PR00969 Pili chaperone signature 39 48 1.5E-32 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS25495 389ecaf9d90b32d9086f725e7e6ec390 243 PRINTS PR00969 Pili chaperone signature 140 155 1.5E-32 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS25495 389ecaf9d90b32d9086f725e7e6ec390 243 PRINTS PR00969 Pili chaperone signature 86 107 1.5E-32 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS25495 389ecaf9d90b32d9086f725e7e6ec390 243 PRINTS PR00969 Pili chaperone signature 115 132 1.5E-32 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS25495 389ecaf9d90b32d9086f725e7e6ec390 243 PRINTS PR00969 Pili chaperone signature 175 190 1.5E-32 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS25495 389ecaf9d90b32d9086f725e7e6ec390 243 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 114 131 - T 09-03-2017 IPR018046 Pili assembly chaperone, conserved site RG43_RS11545 886982ab9d32aa1bcdc7c550fba03497 323 Gene3D G3DSA:3.40.50.510 3 133 1.5E-49 T 09-03-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 RG43_RS11545 886982ab9d32aa1bcdc7c550fba03497 323 Gene3D G3DSA:3.40.35.10 162 321 1.1E-67 T 09-03-2017 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 RG43_RS11545 886982ab9d32aa1bcdc7c550fba03497 323 Pfam PF03830 PTS system sorbose subfamily IIB component 164 310 1.4E-55 T 09-03-2017 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 RG43_RS11545 886982ab9d32aa1bcdc7c550fba03497 323 SUPERFAMILY SSF52728 162 321 9.16E-55 T 09-03-2017 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 RG43_RS11545 886982ab9d32aa1bcdc7c550fba03497 323 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 164 311 1.1E-56 T 09-03-2017 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 RG43_RS11545 886982ab9d32aa1bcdc7c550fba03497 323 Pfam PF03610 PTS system fructose IIA component 5 116 1.9E-35 T 09-03-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 RG43_RS11545 886982ab9d32aa1bcdc7c550fba03497 323 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 2 117 3.7E-52 T 09-03-2017 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 RG43_RS11545 886982ab9d32aa1bcdc7c550fba03497 323 SUPERFAMILY SSF53062 3 128 1.09E-37 T 09-03-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 RG43_RS16665 cacd91d77cf150d30d86fef3b3374a94 453 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 449 52.338 T 09-03-2017 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 RG43_RS16665 cacd91d77cf150d30d86fef3b3374a94 453 Gene3D G3DSA:3.40.50.300 1 213 2.3E-84 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16665 cacd91d77cf150d30d86fef3b3374a94 453 SMART SM00490 259 340 7.6E-32 T 09-03-2017 IPR001650 Helicase, C-terminal RG43_RS16665 cacd91d77cf150d30d86fef3b3374a94 453 SUPERFAMILY SSF52540 75 361 4.65E-74 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16665 cacd91d77cf150d30d86fef3b3374a94 453 SMART SM00487 20 223 9.1E-64 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain RG43_RS16665 cacd91d77cf150d30d86fef3b3374a94 453 Pfam PF00271 Helicase conserved C-terminal domain 237 339 6.7E-26 T 09-03-2017 IPR001650 Helicase, C-terminal RG43_RS16665 cacd91d77cf150d30d86fef3b3374a94 453 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 09-03-2017 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site RG43_RS16665 cacd91d77cf150d30d86fef3b3374a94 453 Pfam PF00270 DEAD/DEAH box helicase 25 196 3.0E-51 T 09-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RG43_RS16665 cacd91d77cf150d30d86fef3b3374a94 453 Gene3D G3DSA:3.40.50.300 214 372 1.9E-52 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS18355 9d48abde8c0c457ef844c2de1212dd7a 355 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 3 325 33.636 T 09-03-2017 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 RG43_RS18355 9d48abde8c0c457ef844c2de1212dd7a 355 Gene3D G3DSA:3.40.50.20 1 69 1.0E-24 T 09-03-2017 IPR016185 Pre-ATP-grasp domain RG43_RS18355 9d48abde8c0c457ef844c2de1212dd7a 355 SUPERFAMILY SSF56059 79 274 1.71E-59 T 09-03-2017 RG43_RS18355 9d48abde8c0c457ef844c2de1212dd7a 355 SUPERFAMILY SSF51246 278 353 5.96E-21 T 09-03-2017 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RG43_RS18355 9d48abde8c0c457ef844c2de1212dd7a 355 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 3 329 2.3E-117 T 09-03-2017 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 RG43_RS18355 9d48abde8c0c457ef844c2de1212dd7a 355 SUPERFAMILY SSF52440 2 76 7.63E-16 T 09-03-2017 IPR016185 Pre-ATP-grasp domain RG43_RS18355 9d48abde8c0c457ef844c2de1212dd7a 355 Gene3D G3DSA:3.30.470.20 156 336 1.6E-60 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RG43_RS18355 9d48abde8c0c457ef844c2de1212dd7a 355 Pfam PF02222 ATP-grasp domain 88 254 1.8E-57 T 09-03-2017 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type RG43_RS18355 9d48abde8c0c457ef844c2de1212dd7a 355 Gene3D G3DSA:3.30.1490.20 94 154 7.6E-23 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RG43_RS21015 3d9fd256ee5ccfe1402fd90fafb00285 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 158 186 1.8E-14 T 09-03-2017 IPR003004 GspF/PilC family RG43_RS21015 3d9fd256ee5ccfe1402fd90fafb00285 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 377 396 1.8E-14 T 09-03-2017 IPR003004 GspF/PilC family RG43_RS21015 3d9fd256ee5ccfe1402fd90fafb00285 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 59 71 1.8E-14 T 09-03-2017 IPR003004 GspF/PilC family RG43_RS21015 3d9fd256ee5ccfe1402fd90fafb00285 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 361 375 1.8E-14 T 09-03-2017 IPR003004 GspF/PilC family RG43_RS21015 3d9fd256ee5ccfe1402fd90fafb00285 400 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 158 186 - T 09-03-2017 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 RG43_RS21015 3d9fd256ee5ccfe1402fd90fafb00285 400 Pfam PF00482 Type II secretion system (T2SS), protein F 269 388 8.3E-24 T 09-03-2017 IPR018076 Type II secretion system F domain RG43_RS21015 3d9fd256ee5ccfe1402fd90fafb00285 400 Pfam PF00482 Type II secretion system (T2SS), protein F 64 186 4.1E-29 T 09-03-2017 IPR018076 Type II secretion system F domain RG43_RS16245 07424baa1e799f9e61e101ce4511b513 550 Gene3D G3DSA:1.20.1270.20 1 158 6.2E-38 T 09-03-2017 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 RG43_RS16245 07424baa1e799f9e61e101ce4511b513 550 PIRSF PIRSF000076 1 550 3.2E-241 T 09-03-2017 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 RG43_RS16245 07424baa1e799f9e61e101ce4511b513 550 Gene3D G3DSA:1.20.1270.20 159 232 4.3E-26 T 09-03-2017 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 RG43_RS16245 07424baa1e799f9e61e101ce4511b513 550 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 548 3.9E-231 T 09-03-2017 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 RG43_RS16245 07424baa1e799f9e61e101ce4511b513 550 SUPERFAMILY SSF56821 1 548 3.79E-190 T 09-03-2017 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 RG43_RS16245 07424baa1e799f9e61e101ce4511b513 550 Gene3D G3DSA:3.40.50.2030 234 379 3.9E-65 T 09-03-2017 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 RG43_RS16245 07424baa1e799f9e61e101ce4511b513 550 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 549 21.654 T 09-03-2017 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 RG43_RS16245 07424baa1e799f9e61e101ce4511b513 550 Pfam PF03063 Prismane/CO dehydrogenase family 1 545 7.3E-157 T 09-03-2017 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 RG43_RS16245 07424baa1e799f9e61e101ce4511b513 550 Gene3D G3DSA:3.40.50.2030 380 547 1.3E-68 T 09-03-2017 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 RG43_RS18830 a762b024477d842a50bf06f5e180268e 491 Gene3D G3DSA:1.20.1250.20 223 405 2.9E-12 T 09-03-2017 RG43_RS18830 a762b024477d842a50bf06f5e180268e 491 Gene3D G3DSA:1.20.1250.20 17 199 2.4E-16 T 09-03-2017 RG43_RS18830 a762b024477d842a50bf06f5e180268e 491 Pfam PF07690 Major Facilitator Superfamily 17 366 2.7E-31 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS18830 a762b024477d842a50bf06f5e180268e 491 SUPERFAMILY SSF103473 15 404 2.62E-43 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS18830 a762b024477d842a50bf06f5e180268e 491 TIGRFAM TIGR00901 2A0125: AmpG-like permease 25 363 3.0E-128 T 09-03-2017 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 GO:0016020 Reactome: R-HSA-425397|Reactome: R-HSA-5619061 RG43_RS12940 bc40d26e6f0eb4747f7ca30cf9c0f29c 96 Hamap MF_02051 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase [lsrG]. 1 96 35.927 T 09-03-2017 IPR033672 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase GO:0016853 RG43_RS12940 bc40d26e6f0eb4747f7ca30cf9c0f29c 96 Gene3D G3DSA:3.30.70.900 1 90 1.3E-27 T 09-03-2017 RG43_RS12940 bc40d26e6f0eb4747f7ca30cf9c0f29c 96 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 1.3E-16 T 09-03-2017 IPR007138 Antibiotic biosynthesis monooxygenase domain RG43_RS12940 bc40d26e6f0eb4747f7ca30cf9c0f29c 96 SUPERFAMILY SSF54909 1 94 2.56E-25 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel RG43_RS22780 642602ef9684aab00daeeae70738fc17 177 PRINTS PR01171 Bacterial lipocalin signature 163 173 2.6E-51 T 09-03-2017 IPR002446 Lipocalin, bacterial GO:0005215 RG43_RS22780 642602ef9684aab00daeeae70738fc17 177 PRINTS PR01171 Bacterial lipocalin signature 104 118 2.6E-51 T 09-03-2017 IPR002446 Lipocalin, bacterial GO:0005215 RG43_RS22780 642602ef9684aab00daeeae70738fc17 177 PRINTS PR01171 Bacterial lipocalin signature 136 147 2.6E-51 T 09-03-2017 IPR002446 Lipocalin, bacterial GO:0005215 RG43_RS22780 642602ef9684aab00daeeae70738fc17 177 PRINTS PR01171 Bacterial lipocalin signature 121 129 2.6E-51 T 09-03-2017 IPR002446 Lipocalin, bacterial GO:0005215 RG43_RS22780 642602ef9684aab00daeeae70738fc17 177 PRINTS PR01171 Bacterial lipocalin signature 51 67 2.6E-51 T 09-03-2017 IPR002446 Lipocalin, bacterial GO:0005215 RG43_RS22780 642602ef9684aab00daeeae70738fc17 177 PRINTS PR01171 Bacterial lipocalin signature 34 48 2.6E-51 T 09-03-2017 IPR002446 Lipocalin, bacterial GO:0005215 RG43_RS22780 642602ef9684aab00daeeae70738fc17 177 PRINTS PR01171 Bacterial lipocalin signature 70 79 2.6E-51 T 09-03-2017 IPR002446 Lipocalin, bacterial GO:0005215 RG43_RS22780 642602ef9684aab00daeeae70738fc17 177 ProSitePatterns PS00213 Lipocalin signature. 33 46 - T 09-03-2017 IPR022272 Lipocalin family conserved site RG43_RS22780 642602ef9684aab00daeeae70738fc17 177 Gene3D G3DSA:2.40.128.20 2 175 9.3E-61 T 09-03-2017 IPR012674 Calycin RG43_RS22780 642602ef9684aab00daeeae70738fc17 177 PIRSF PIRSF036893 1 177 3.2E-52 T 09-03-2017 IPR022271 Lipocalin, ApoD type RG43_RS22780 642602ef9684aab00daeeae70738fc17 177 SUPERFAMILY SSF50814 15 176 9.98E-50 T 09-03-2017 IPR011038 Calycin-like RG43_RS22780 642602ef9684aab00daeeae70738fc17 177 Pfam PF08212 Lipocalin-like domain 34 174 1.5E-50 T 09-03-2017 IPR000566 Lipocalin/cytosolic fatty-acid binding domain RG43_RS20775 2ca31746051e5c91f02254cc982d6d9d 176 SUPERFAMILY SSF55144 6 174 6.28E-45 T 09-03-2017 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase RG43_RS20775 2ca31746051e5c91f02254cc982d6d9d 176 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 6 174 2.0E-44 T 09-03-2017 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 RG43_RS20775 2ca31746051e5c91f02254cc982d6d9d 176 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 5 174 22.43 T 09-03-2017 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 RG43_RS20775 2ca31746051e5c91f02254cc982d6d9d 176 Gene3D G3DSA:3.90.1140.10 5 176 1.8E-50 T 09-03-2017 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase RG43_RS20775 2ca31746051e5c91f02254cc982d6d9d 176 Pfam PF02834 LigT like Phosphoesterase 11 89 1.8E-12 T 09-03-2017 IPR014051 Phosphoesterase, HXTX RG43_RS20775 2ca31746051e5c91f02254cc982d6d9d 176 Pfam PF02834 LigT like Phosphoesterase 92 166 8.0E-8 T 09-03-2017 IPR014051 Phosphoesterase, HXTX RG43_RS17325 029ef8d31b6e4eba21b7bb703a4276ae 142 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 141 2.4E-23 T 09-03-2017 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 RG43_RS17325 029ef8d31b6e4eba21b7bb703a4276ae 142 TIGRFAM TIGR02801 tolR: protein TolR 13 140 1.4E-39 T 09-03-2017 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 RG43_RS22345 ef23aa39d7fa5e452a998421f0e9cd7d 113 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 109 8.5E-25 T 09-03-2017 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like RG43_RS22345 ef23aa39d7fa5e452a998421f0e9cd7d 113 SUPERFAMILY SSF110857 1 110 7.85E-35 T 09-03-2017 IPR013024 Butirosin biosynthesis, BtrG-like RG43_RS22345 ef23aa39d7fa5e452a998421f0e9cd7d 113 Gene3D G3DSA:3.10.490.10 1 111 2.2E-40 T 09-03-2017 IPR013024 Butirosin biosynthesis, BtrG-like RG43_RS22395 bced7d7444c2ff7b7dda4668c2f7d947 246 Pfam PF00459 Inositol monophosphatase family 5 233 5.5E-49 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 RG43_RS22395 bced7d7444c2ff7b7dda4668c2f7d947 246 Gene3D G3DSA:3.40.190.80 148 243 1.5E-41 T 09-03-2017 RG43_RS22395 bced7d7444c2ff7b7dda4668c2f7d947 246 SUPERFAMILY SSF56655 1 243 2.88E-76 T 09-03-2017 RG43_RS22395 bced7d7444c2ff7b7dda4668c2f7d947 246 Gene3D G3DSA:3.30.540.10 1 147 5.8E-45 T 09-03-2017 RG43_RS22395 bced7d7444c2ff7b7dda4668c2f7d947 246 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 1 244 7.2E-114 T 09-03-2017 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 RG43_RS22395 bced7d7444c2ff7b7dda4668c2f7d947 246 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 09-03-2017 IPR020583 Inositol monophosphatase, metal-binding site RG43_RS22395 bced7d7444c2ff7b7dda4668c2f7d947 246 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 204 218 - T 09-03-2017 IPR020550 Inositol monophosphatase, conserved site GO:0046854 RG43_RS25405 3f68597921753db6de1a80dbcc936058 483 Pfam PF05762 VWA domain containing CoxE-like protein 307 458 1.7E-10 T 09-03-2017 IPR008912 Uncharacterised protein family CoxE-like RG43_RS25405 3f68597921753db6de1a80dbcc936058 483 Hamap MF_01626 Protein ViaA [viaA]. 1 483 60.472 T 09-03-2017 IPR023481 Uncharacterised protein family ViaA RG43_RS25405 3f68597921753db6de1a80dbcc936058 483 SMART SM00327 319 483 2.1E-13 T 09-03-2017 IPR002035 von Willebrand factor, type A RG43_RS25405 3f68597921753db6de1a80dbcc936058 483 SUPERFAMILY SSF53300 318 459 4.79E-19 T 09-03-2017 IPR002035 von Willebrand factor, type A RG43_RS01670 73cf2129d481318202345c58426cbd8b 146 ProDom PD059127 YHHA MEMBRANE OUTER PRECURSOR SIGNAL STY4259 ORFQ ECS4294 1 146 2.0E-47 T 09-03-2017 IPR020158 Protein of unknown function DUF2756 RG43_RS01670 73cf2129d481318202345c58426cbd8b 146 Pfam PF10956 Protein of unknown function (DUF2756) 1 105 4.2E-53 T 09-03-2017 IPR020158 Protein of unknown function DUF2756 RG43_RS18405 d24ceb91c600a837526109fe45ddaba8 453 Gene3D G3DSA:3.20.20.140 68 398 3.1E-115 T 09-03-2017 RG43_RS18405 d24ceb91c600a837526109fe45ddaba8 453 Hamap MF_01645 Allantoinase [allB]. 2 450 53.494 T 09-03-2017 IPR017593 Allantoinase GO:0000256|GO:0004038|GO:0008270|GO:0050897 KEGG: 00230+3.5.2.5|MetaCyc: PWY-5697|MetaCyc: PWY-5698 RG43_RS18405 d24ceb91c600a837526109fe45ddaba8 453 Gene3D G3DSA:2.30.40.10 4 67 6.0E-23 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RG43_RS18405 d24ceb91c600a837526109fe45ddaba8 453 SUPERFAMILY SSF51338 378 448 9.47E-30 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RG43_RS18405 d24ceb91c600a837526109fe45ddaba8 453 SUPERFAMILY SSF51338 3 53 9.47E-30 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RG43_RS18405 d24ceb91c600a837526109fe45ddaba8 453 Pfam PF01979 Amidohydrolase family 50 431 1.1E-21 T 09-03-2017 IPR006680 Amidohydrolase-related GO:0016787 RG43_RS18405 d24ceb91c600a837526109fe45ddaba8 453 TIGRFAM TIGR03178 allantoinase: allantoinase 4 449 2.3E-202 T 09-03-2017 IPR017593 Allantoinase GO:0000256|GO:0004038|GO:0008270|GO:0050897 KEGG: 00230+3.5.2.5|MetaCyc: PWY-5697|MetaCyc: PWY-5698 RG43_RS18405 d24ceb91c600a837526109fe45ddaba8 453 SUPERFAMILY SSF51556 54 379 3.15E-98 T 09-03-2017 IPR032466 Metal-dependent hydrolase RG43_RS01645 03154037a96b043c144ea57dbcf5fcb1 438 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 140 157 - T 09-03-2017 IPR006061 Solute-binding family 1, conserved site GO:0005215|GO:0006810 RG43_RS01645 03154037a96b043c144ea57dbcf5fcb1 438 Pfam PF13416 Bacterial extracellular solute-binding protein 44 368 4.2E-45 T 09-03-2017 RG43_RS01645 03154037a96b043c144ea57dbcf5fcb1 438 SUPERFAMILY SSF53850 25 425 2.74E-77 T 09-03-2017 RG43_RS01645 03154037a96b043c144ea57dbcf5fcb1 438 Gene3D G3DSA:3.40.190.10 145 345 1.5E-42 T 09-03-2017 RG43_RS00760 bdf43d94844e8e1113c69c49f67c0e25 202 Pfam PF00043 Glutathione S-transferase, C-terminal domain 97 192 5.2E-11 T 09-03-2017 IPR004046 Glutathione S-transferase, C-terminal RG43_RS00760 bdf43d94844e8e1113c69c49f67c0e25 202 Gene3D G3DSA:3.40.30.10 1 89 1.7E-20 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS00760 bdf43d94844e8e1113c69c49f67c0e25 202 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 71 5.1E-13 T 09-03-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RG43_RS00760 bdf43d94844e8e1113c69c49f67c0e25 202 Gene3D G3DSA:1.20.1050.10 90 197 1.9E-12 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like RG43_RS00760 bdf43d94844e8e1113c69c49f67c0e25 202 SUPERFAMILY SSF52833 1 100 1.28E-18 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS00760 bdf43d94844e8e1113c69c49f67c0e25 202 SUPERFAMILY SSF47616 73 199 3.13E-15 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like RG43_RS09265 3a5efd80dc8fbaa7a0757ad4a1d6d1d5 369 SUPERFAMILY SSF52540 108 355 1.89E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS09265 3a5efd80dc8fbaa7a0757ad4a1d6d1d5 369 Gene3D G3DSA:3.40.50.300 97 349 1.2E-105 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS09265 3a5efd80dc8fbaa7a0757ad4a1d6d1d5 369 SUPERFAMILY SSF117916 15 85 1.05E-5 T 09-03-2017 RG43_RS09265 3a5efd80dc8fbaa7a0757ad4a1d6d1d5 369 ProSitePatterns PS01215 Mrp family signature. 213 229 - T 09-03-2017 IPR000808 Mrp, conserved site GO:0005524 RG43_RS09265 3a5efd80dc8fbaa7a0757ad4a1d6d1d5 369 Hamap MF_02040 Iron-sulfur cluster carrier protein. 101 350 37.76 T 09-03-2017 IPR019591 Mrp/NBP35 ATP-binding protein RG43_RS09265 3a5efd80dc8fbaa7a0757ad4a1d6d1d5 369 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 106 349 1.6E-101 T 09-03-2017 IPR019591 Mrp/NBP35 ATP-binding protein RG43_RS18010 9c2ba84d6d9856c1543a4cd59a4414d1 510 Gene3D G3DSA:3.40.1080.10 29 238 4.8E-108 T 09-03-2017 RG43_RS18010 9c2ba84d6d9856c1543a4cd59a4414d1 510 Pfam PF04223 Citrate lyase, alpha subunit (CitF) 43 508 5.2E-274 T 09-03-2017 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 RG43_RS18010 9c2ba84d6d9856c1543a4cd59a4414d1 510 SUPERFAMILY SSF100950 35 238 2.16E-76 T 09-03-2017 RG43_RS18010 9c2ba84d6d9856c1543a4cd59a4414d1 510 SUPERFAMILY SSF100950 242 508 7.85E-59 T 09-03-2017 RG43_RS18010 9c2ba84d6d9856c1543a4cd59a4414d1 510 TIGRFAM TIGR01584 citF: citrate lyase, alpha subunit 36 510 1.6E-246 T 09-03-2017 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 RG43_RS18010 9c2ba84d6d9856c1543a4cd59a4414d1 510 PIRSF PIRSF009451 1 510 8.6E-273 T 09-03-2017 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 RG43_RS18010 9c2ba84d6d9856c1543a4cd59a4414d1 510 Gene3D G3DSA:3.40.810.20 242 483 2.1E-76 T 09-03-2017 RG43_RS02510 14ae9bf094d37bed1c647b85d7a70d2d 458 SUPERFAMILY SSF116726 390 450 1.57E-6 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RG43_RS02510 14ae9bf094d37bed1c647b85d7a70d2d 458 Pfam PF02254 TrkA-N domain 3 111 5.8E-30 T 09-03-2017 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 RG43_RS02510 14ae9bf094d37bed1c647b85d7a70d2d 458 Pfam PF02254 TrkA-N domain 235 350 3.2E-26 T 09-03-2017 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 RG43_RS02510 14ae9bf094d37bed1c647b85d7a70d2d 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 2.5E-36 T 09-03-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 RG43_RS02510 14ae9bf094d37bed1c647b85d7a70d2d 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 2.5E-36 T 09-03-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 RG43_RS02510 14ae9bf094d37bed1c647b85d7a70d2d 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 2.5E-36 T 09-03-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 RG43_RS02510 14ae9bf094d37bed1c647b85d7a70d2d 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 2.5E-36 T 09-03-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 RG43_RS02510 14ae9bf094d37bed1c647b85d7a70d2d 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 2.5E-36 T 09-03-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 RG43_RS02510 14ae9bf094d37bed1c647b85d7a70d2d 458 SUPERFAMILY SSF51735 1 152 2.99E-36 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS02510 14ae9bf094d37bed1c647b85d7a70d2d 458 SUPERFAMILY SSF51735 232 376 3.83E-33 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS02510 14ae9bf094d37bed1c647b85d7a70d2d 458 SUPERFAMILY SSF116726 148 226 1.26E-8 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RG43_RS02510 14ae9bf094d37bed1c647b85d7a70d2d 458 Gene3D G3DSA:3.40.50.720 1 152 4.6E-50 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS02510 14ae9bf094d37bed1c647b85d7a70d2d 458 Gene3D G3DSA:3.40.50.720 233 376 1.1E-37 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS02510 14ae9bf094d37bed1c647b85d7a70d2d 458 Pfam PF02080 TrkA-C domain 390 451 1.3E-9 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RG43_RS02510 14ae9bf094d37bed1c647b85d7a70d2d 458 Pfam PF02080 TrkA-C domain 157 225 1.6E-10 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RG43_RS07245 55ad6bc1ccf0b98ad931a49b48e9722b 458 Pfam PF02601 Exonuclease VII, large subunit 126 440 3.5E-103 T 09-03-2017 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 RG43_RS07245 55ad6bc1ccf0b98ad931a49b48e9722b 458 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 7 443 30.643 T 09-03-2017 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 RG43_RS07245 55ad6bc1ccf0b98ad931a49b48e9722b 458 Pfam PF13742 OB-fold nucleic acid binding domain 10 103 1.3E-32 T 09-03-2017 IPR025824 OB-fold nucleic acid binding domain GO:0003676 RG43_RS07245 55ad6bc1ccf0b98ad931a49b48e9722b 458 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 359 1.7E-141 T 09-03-2017 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 RG43_RS18140 39499aea133fc9cf6a8d949d7204c68c 330 SUPERFAMILY SSF81345 3 325 1.44E-71 T 09-03-2017 IPR029022 ABC transporter, BtuC-like RG43_RS18140 39499aea133fc9cf6a8d949d7204c68c 330 Pfam PF01032 FecCD transport family 19 324 4.3E-84 T 09-03-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 RG43_RS18140 39499aea133fc9cf6a8d949d7204c68c 330 Gene3D G3DSA:1.10.3470.10 6 329 1.1E-89 T 09-03-2017 IPR029022 ABC transporter, BtuC-like RG43_RS06870 f09e1259fffbbd3903c5f95af717e2be 159 PIRSF PIRSF004923 1 150 6.4E-44 T 09-03-2017 IPR026268 Protein RseC RG43_RS06870 f09e1259fffbbd3903c5f95af717e2be 159 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 139 7.5E-33 T 09-03-2017 IPR007359 Positive regulator of sigma(E), RseC/MucC RG43_RS11075 2743f67b48ad68f4b8bd3b756683bfac 214 Gene3D G3DSA:1.10.287.500 35 167 3.8E-56 T 09-03-2017 RG43_RS11075 2743f67b48ad68f4b8bd3b756683bfac 214 Gene3D G3DSA:1.20.5.590 1 34 2.5E-23 T 09-03-2017 RG43_RS11075 2743f67b48ad68f4b8bd3b756683bfac 214 PIRSF PIRSF002884 2 214 6.6E-89 T 09-03-2017 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 RG43_RS11075 2743f67b48ad68f4b8bd3b756683bfac 214 SUPERFAMILY SSF75708 11 213 1.12E-66 T 09-03-2017 RG43_RS11075 2743f67b48ad68f4b8bd3b756683bfac 214 Pfam PF04344 Chemotaxis phosphatase, CheZ 17 214 2.4E-77 T 09-03-2017 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 RG43_RS15450 bc49572d0ba3ac149553f2e2b3ffca64 423 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 61 410 6.2E-108 T 09-03-2017 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 RG43_RS15450 bc49572d0ba3ac149553f2e2b3ffca64 423 Pfam PF04261 Dyp-type peroxidase family 61 410 7.6E-122 T 09-03-2017 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 RG43_RS15450 bc49572d0ba3ac149553f2e2b3ffca64 423 TIGRFAM TIGR01412 tat_substr_1: Tat-translocated enzyme 6 422 4.5E-186 T 09-03-2017 IPR006313 Deferrochelatase/peroxidase EfeB GO:0004601|GO:0015684|GO:0020037|GO:0033212 RG43_RS15450 bc49572d0ba3ac149553f2e2b3ffca64 423 SUPERFAMILY SSF54909 54 416 2.5E-99 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel RG43_RS05960 be27e644b13994f36f3bfab71de706cc 223 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 3 223 40.34 T 09-03-2017 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 RG43_RS05960 be27e644b13994f36f3bfab71de706cc 223 Gene3D G3DSA:3.20.20.70 29 136 1.3E-7 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS05960 be27e644b13994f36f3bfab71de706cc 223 Pfam PF04055 Radical SAM superfamily 27 132 3.1E-8 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 RG43_RS05960 be27e644b13994f36f3bfab71de706cc 223 PIRSF PIRSF000370 1 223 2.5E-72 T 09-03-2017 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 RG43_RS05960 be27e644b13994f36f3bfab71de706cc 223 SUPERFAMILY SSF102114 24 119 3.79E-7 T 09-03-2017 RG43_RS05960 be27e644b13994f36f3bfab71de706cc 223 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 9 223 2.7E-111 T 09-03-2017 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 RG43_RS05960 be27e644b13994f36f3bfab71de706cc 223 Pfam PF13394 4Fe-4S single cluster domain 24 128 1.1E-13 T 09-03-2017 RG43_RS19880 b41e213f8356b1ab90e8b8954ae02bd5 204 Gene3D G3DSA:1.10.530.10 149 190 6.0E-5 T 09-03-2017 RG43_RS19880 b41e213f8356b1ab90e8b8954ae02bd5 204 Gene3D G3DSA:1.10.530.10 37 52 6.0E-5 T 09-03-2017 RG43_RS19880 b41e213f8356b1ab90e8b8954ae02bd5 204 Gene3D G3DSA:3.30.20.10 111 148 2.8E-12 T 09-03-2017 RG43_RS19880 b41e213f8356b1ab90e8b8954ae02bd5 204 SUPERFAMILY SSF53955 2 202 1.07E-40 T 09-03-2017 IPR023346 Lysozyme-like domain RG43_RS19880 b41e213f8356b1ab90e8b8954ae02bd5 204 Pfam PF00182 Chitinase class I 85 163 2.4E-6 T 09-03-2017 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 RG43_RS16650 5766ac9f1e39226e7ae1f9b4f75ed334 320 Gene3D G3DSA:3.40.1030.10 80 319 1.7E-41 T 09-03-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RG43_RS16650 5766ac9f1e39226e7ae1f9b4f75ed334 320 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 69 1.5E-10 T 09-03-2017 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 RG43_RS16650 5766ac9f1e39226e7ae1f9b4f75ed334 320 Gene3D G3DSA:1.20.970.10 7 69 6.2E-19 T 09-03-2017 RG43_RS16650 5766ac9f1e39226e7ae1f9b4f75ed334 320 SUPERFAMILY SSF47648 7 72 1.7E-14 T 09-03-2017 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 RG43_RS16650 5766ac9f1e39226e7ae1f9b4f75ed334 320 SUPERFAMILY SSF52418 75 319 8.79E-49 T 09-03-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RG43_RS08725 3853a51869c6d24e9c035a20c3a4e981 547 Gene3D G3DSA:3.40.50.300 322 530 9.1E-44 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS08725 3853a51869c6d24e9c035a20c3a4e981 547 Pfam PF00005 ABC transporter 341 477 4.9E-27 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS08725 3853a51869c6d24e9c035a20c3a4e981 547 Pfam PF00664 ABC transporter transmembrane region 47 197 2.8E-5 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RG43_RS08725 3853a51869c6d24e9c035a20c3a4e981 547 Gene3D G3DSA:1.20.1560.10 9 303 3.0E-20 T 09-03-2017 RG43_RS08725 3853a51869c6d24e9c035a20c3a4e981 547 SUPERFAMILY SSF52540 316 530 3.3E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS08725 3853a51869c6d24e9c035a20c3a4e981 547 SUPERFAMILY SSF90123 4 299 2.22E-26 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RG43_RS08725 3853a51869c6d24e9c035a20c3a4e981 547 SMART SM00382 348 526 2.6E-14 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS08725 3853a51869c6d24e9c035a20c3a4e981 547 TIGRFAM TIGR01194 cyc_pep_trnsptr: cyclic peptide transporter 2 527 1.6E-109 T 09-03-2017 IPR005898 Cyclic peptide transporter GO:0005524|GO:0015197|GO:0015833|GO:0016021 RG43_RS08725 3853a51869c6d24e9c035a20c3a4e981 547 ProSitePatterns PS00211 ABC transporters family signature. 450 464 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS20745 fcca46129e2a583d786e10ac7feb6281 660 SUPERFAMILY SSF81345 6 325 3.4E-59 T 09-03-2017 IPR029022 ABC transporter, BtuC-like RG43_RS20745 fcca46129e2a583d786e10ac7feb6281 660 Gene3D G3DSA:1.10.3470.10 7 327 6.2E-74 T 09-03-2017 IPR029022 ABC transporter, BtuC-like RG43_RS20745 fcca46129e2a583d786e10ac7feb6281 660 Pfam PF01032 FecCD transport family 16 323 1.9E-63 T 09-03-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 RG43_RS20745 fcca46129e2a583d786e10ac7feb6281 660 Pfam PF01032 FecCD transport family 359 657 4.9E-75 T 09-03-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 RG43_RS20745 fcca46129e2a583d786e10ac7feb6281 660 Gene3D G3DSA:1.10.3470.10 342 659 5.8E-83 T 09-03-2017 IPR029022 ABC transporter, BtuC-like RG43_RS20745 fcca46129e2a583d786e10ac7feb6281 660 SUPERFAMILY SSF81345 345 657 6.02E-73 T 09-03-2017 IPR029022 ABC transporter, BtuC-like RG43_RS15470 08fd3405ec60b02af2fce993ad7aa698 502 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 6 490 3.0E-234 T 09-03-2017 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 RG43_RS15470 08fd3405ec60b02af2fce993ad7aa698 502 Pfam PF00474 Sodium:solute symporter family 35 437 7.0E-148 T 09-03-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RG43_RS15470 08fd3405ec60b02af2fce993ad7aa698 502 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 437 4.2E-133 T 09-03-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RG43_RS15470 08fd3405ec60b02af2fce993ad7aa698 502 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 419 439 - T 09-03-2017 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 RG43_RS15470 08fd3405ec60b02af2fce993ad7aa698 502 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 157 182 - T 09-03-2017 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 RG43_RS01510 a93e45772153cb3613cc95a3453a1f1a 524 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 68 433 1.5E-91 T 09-03-2017 IPR000914 Solute-binding protein family 5 domain RG43_RS01510 a93e45772153cb3613cc95a3453a1f1a 524 SUPERFAMILY SSF53850 27 517 1.99E-128 T 09-03-2017 RG43_RS01510 a93e45772153cb3613cc95a3453a1f1a 524 Gene3D G3DSA:3.40.190.10 128 281 7.8E-39 T 09-03-2017 RG43_RS01510 a93e45772153cb3613cc95a3453a1f1a 524 PIRSF PIRSF002741 20 520 6.7E-89 T 09-03-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RG43_RS01510 a93e45772153cb3613cc95a3453a1f1a 524 Gene3D G3DSA:3.10.105.10 282 490 2.1E-48 T 09-03-2017 RG43_RS01510 a93e45772153cb3613cc95a3453a1f1a 524 TIGRFAM TIGR02294 nickel_nikA: nickel ABC transporter, nickel/metallophore periplasmic binding protein 22 520 1.9E-251 T 09-03-2017 IPR011980 Periplasmic nickel-binding protein GO:0015675|GO:0016151|GO:0020037 RG43_RS01510 a93e45772153cb3613cc95a3453a1f1a 524 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 73 95 - T 09-03-2017 IPR023765 Solute-binding protein family 5, conserved site RG43_RS03005 1d548dd9d8568695e9de75257f23917a 97 Pfam PF13466 STAS domain 14 90 4.2E-18 T 09-03-2017 IPR002645 STAS domain RG43_RS03005 1d548dd9d8568695e9de75257f23917a 97 Gene3D G3DSA:3.30.750.24 9 90 2.1E-11 T 09-03-2017 IPR002645 STAS domain RG43_RS03005 1d548dd9d8568695e9de75257f23917a 97 SUPERFAMILY SSF52091 6 91 2.75E-14 T 09-03-2017 IPR002645 STAS domain RG43_RS18470 86fa61d4c99fb5b3ba1d451fd413e82d 269 Gene3D G3DSA:3.40.50.720 15 264 6.2E-60 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS18470 86fa61d4c99fb5b3ba1d451fd413e82d 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.8E-17 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS18470 86fa61d4c99fb5b3ba1d451fd413e82d 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 1.8E-17 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS18470 86fa61d4c99fb5b3ba1d451fd413e82d 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 1.8E-17 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS18470 86fa61d4c99fb5b3ba1d451fd413e82d 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 1.8E-17 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS18470 86fa61d4c99fb5b3ba1d451fd413e82d 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.8E-17 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS18470 86fa61d4c99fb5b3ba1d451fd413e82d 269 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RG43_RS18470 86fa61d4c99fb5b3ba1d451fd413e82d 269 SUPERFAMILY SSF51735 15 266 1.89E-55 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS18470 86fa61d4c99fb5b3ba1d451fd413e82d 269 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 16 195 0.0044 T 09-03-2017 RG43_RS18470 86fa61d4c99fb5b3ba1d451fd413e82d 269 Pfam PF00106 short chain dehydrogenase 16 204 3.3E-38 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS12190 5a951fcd7a8b3393a34903de258cfc85 118 SUPERFAMILY SSF47413 1 118 1.12E-48 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS12190 5a951fcd7a8b3393a34903de258cfc85 118 Gene3D G3DSA:1.10.3100.10 1 118 8.4E-63 T 09-03-2017 IPR027910 YdiL-like domain RG43_RS12190 5a951fcd7a8b3393a34903de258cfc85 118 Pfam PF08965 Domain of unknown function (DUF1870) 1 118 3.7E-56 T 09-03-2017 IPR015060 Protein of unknown function DUF1870 RG43_RS18440 f9dad1512fd5ef33bce6be0e77e90267 308 SUPERFAMILY SSF46785 3 88 1.09E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS18440 f9dad1512fd5ef33bce6be0e77e90267 308 Gene3D G3DSA:1.10.10.10 2 88 4.4E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS18440 f9dad1512fd5ef33bce6be0e77e90267 308 Gene3D G3DSA:3.40.190.10 183 256 3.7E-9 T 09-03-2017 RG43_RS18440 f9dad1512fd5ef33bce6be0e77e90267 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 1.3E-19 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS18440 f9dad1512fd5ef33bce6be0e77e90267 308 SUPERFAMILY SSF53850 105 292 4.52E-21 T 09-03-2017 RG43_RS18440 f9dad1512fd5ef33bce6be0e77e90267 308 Pfam PF03466 LysR substrate binding domain 91 290 1.7E-20 T 09-03-2017 IPR005119 LysR, substrate-binding RG43_RS18440 f9dad1512fd5ef33bce6be0e77e90267 308 Gene3D G3DSA:3.40.190.10 105 182 2.0E-4 T 09-03-2017 RG43_RS18420 645303e71121f29df44cd61af9052bec 258 PIRSF PIRSF006241 1 258 1.3E-96 T 09-03-2017 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 RG43_RS18420 645303e71121f29df44cd61af9052bec 258 Gene3D G3DSA:3.20.20.150 1 257 2.5E-89 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain RG43_RS18420 645303e71121f29df44cd61af9052bec 258 TIGRFAM TIGR03234 OH-pyruv-isom: hydroxypyruvate isomerase 3 255 1.6E-125 T 09-03-2017 IPR017643 Hydroxypyruvate isomerase KEGG: 00630+5.3.1.22 RG43_RS18420 645303e71121f29df44cd61af9052bec 258 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 7.6E-34 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain RG43_RS18420 645303e71121f29df44cd61af9052bec 258 SUPERFAMILY SSF51658 1 257 1.8E-83 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain RG43_RS00495 1ffafa2093086d104e22d1c2b9bd6201 561 Gene3D G3DSA:2.40.50.140 312 382 3.0E-20 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS00495 1ffafa2093086d104e22d1c2b9bd6201 561 Gene3D G3DSA:1.10.150.20 413 476 7.7E-4 T 09-03-2017 RG43_RS00495 1ffafa2093086d104e22d1c2b9bd6201 561 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 313 386 1.0E-18 T 09-03-2017 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 RG43_RS00495 1ffafa2093086d104e22d1c2b9bd6201 561 Gene3D G3DSA:3.30.470.30 129 245 5.9E-21 T 09-03-2017 RG43_RS00495 1ffafa2093086d104e22d1c2b9bd6201 561 SUPERFAMILY SSF56091 25 306 1.46E-65 T 09-03-2017 RG43_RS00495 1ffafa2093086d104e22d1c2b9bd6201 561 SUPERFAMILY SSF50249 311 387 5.65E-17 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS00495 1ffafa2093086d104e22d1c2b9bd6201 561 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 125 154 - T 09-03-2017 IPR018239 NAD-dependent DNA ligase, active site RG43_RS00495 1ffafa2093086d104e22d1c2b9bd6201 561 Hamap MF_01587 DNA ligase B [ligB]. 3 559 52.201 T 09-03-2017 IPR020923 DNA ligase B GO:0003911|GO:0006259 RG43_RS00495 1ffafa2093086d104e22d1c2b9bd6201 561 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 322 337 - T 09-03-2017 IPR033136 NAD-dependent DNA ligase, conserved site RG43_RS00495 1ffafa2093086d104e22d1c2b9bd6201 561 Gene3D G3DSA:1.10.287.610 26 71 3.5E-7 T 09-03-2017 RG43_RS00495 1ffafa2093086d104e22d1c2b9bd6201 561 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 101 307 7.3E-24 T 09-03-2017 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 RG43_RS00495 1ffafa2093086d104e22d1c2b9bd6201 561 SUPERFAMILY SSF47781 405 557 3.61E-17 T 09-03-2017 IPR010994 RuvA domain 2-like RG43_RS00495 1ffafa2093086d104e22d1c2b9bd6201 561 SMART SM00532 29 426 4.0E-128 T 09-03-2017 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 RG43_RS10140 82db777da0f780d81eba9d53f6888c59 350 Gene3D G3DSA:3.40.50.2000 205 313 2.3E-15 T 09-03-2017 RG43_RS10140 82db777da0f780d81eba9d53f6888c59 350 SUPERFAMILY SSF53756 30 349 1.99E-32 T 09-03-2017 RG43_RS10140 82db777da0f780d81eba9d53f6888c59 350 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 232 320 9.4E-7 T 09-03-2017 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 RG43_RS00380 23b1eff97c96d845673066502d5f1d82 28 Pfam PF12759 InsA C-terminal domain 3 28 7.5E-16 T 09-03-2017 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain RG43_RS11005 23b1eff97c96d845673066502d5f1d82 28 Pfam PF12759 InsA C-terminal domain 3 28 7.5E-16 T 09-03-2017 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain RG43_RS02875 fe05d91352169ffe5ccda02642b445e3 291 Gene3D G3DSA:3.30.420.40 2 134 1.2E-33 T 09-03-2017 RG43_RS02875 fe05d91352169ffe5ccda02642b445e3 291 Gene3D G3DSA:3.30.420.40 135 260 3.0E-40 T 09-03-2017 RG43_RS02875 fe05d91352169ffe5ccda02642b445e3 291 Pfam PF00480 ROK family 4 288 1.0E-90 T 09-03-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 RG43_RS02875 fe05d91352169ffe5ccda02642b445e3 291 SUPERFAMILY SSF53067 1 287 3.46E-54 T 09-03-2017 RG43_RS02875 fe05d91352169ffe5ccda02642b445e3 291 Hamap MF_01234 N-acetylmannosamine kinase [nanK]. 1 290 48.442 T 09-03-2017 IPR023945 N-acetylmannosamine kinase, bacterial GO:0005524|GO:0008270|GO:0009384|GO:0019262 KEGG: 00520+2.7.1.60|MetaCyc: PWY-6138 RG43_RS02875 fe05d91352169ffe5ccda02642b445e3 291 ProSitePatterns PS01125 ROK family signature. 129 156 - T 09-03-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 RG43_RS10920 ef73db74c6527296f3b44cb46d40a2a0 221 Pfam PF03695 Uncharacterised protein family (UPF0149) 12 183 5.5E-35 T 09-03-2017 IPR011978 Uncharacterised protein family UPF0149 RG43_RS10920 ef73db74c6527296f3b44cb46d40a2a0 221 Gene3D G3DSA:3.10.450.50 187 219 1.7E-12 T 09-03-2017 IPR032710 NTF2-like domain RG43_RS10920 ef73db74c6527296f3b44cb46d40a2a0 221 Pfam PF02810 SEC-C motif 203 220 1.7E-10 T 09-03-2017 IPR004027 SEC-C motif RG43_RS10920 ef73db74c6527296f3b44cb46d40a2a0 221 SUPERFAMILY SSF103642 201 220 1.05E-7 T 09-03-2017 RG43_RS10920 ef73db74c6527296f3b44cb46d40a2a0 221 SUPERFAMILY SSF101327 14 182 6.02E-23 T 09-03-2017 IPR011978 Uncharacterised protein family UPF0149 RG43_RS10920 ef73db74c6527296f3b44cb46d40a2a0 221 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 10 182 6.0E-55 T 09-03-2017 IPR011978 Uncharacterised protein family UPF0149 RG43_RS08060 1de40c116bd26f06f23127c4d2cb796e 94 Pfam PF04175 Protein of unknown function (DUF406) 3 94 6.7E-39 T 09-03-2017 IPR005272 Conserved hypothetical protein CHP00743 RG43_RS08060 1de40c116bd26f06f23127c4d2cb796e 94 TIGRFAM TIGR00743 TIGR00743: conserved hypothetical protein 1 94 3.9E-47 T 09-03-2017 IPR005272 Conserved hypothetical protein CHP00743 RG43_RS08060 1de40c116bd26f06f23127c4d2cb796e 94 Gene3D G3DSA:3.30.70.860 23 94 3.4E-35 T 09-03-2017 RG43_RS01910 0ebe2941f7b973d2acc9fc3c04b89af5 773 Gene3D G3DSA:2.40.50.140 634 720 3.9E-29 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS01910 0ebe2941f7b973d2acc9fc3c04b89af5 773 Pfam PF12836 Helix-hairpin-helix motif 491 555 1.4E-28 T 09-03-2017 RG43_RS01910 0ebe2941f7b973d2acc9fc3c04b89af5 773 SMART SM00316 649 720 1.0E-26 T 09-03-2017 IPR022967 RNA-binding domain, S1 RG43_RS01910 0ebe2941f7b973d2acc9fc3c04b89af5 773 Gene3D G3DSA:1.10.3500.10 111 323 3.9E-105 T 09-03-2017 IPR023323 Tex-like domain RG43_RS01910 0ebe2941f7b973d2acc9fc3c04b89af5 773 Gene3D G3DSA:1.10.3500.10 451 498 3.9E-105 T 09-03-2017 IPR023323 Tex-like domain RG43_RS01910 0ebe2941f7b973d2acc9fc3c04b89af5 773 SMART SM00732 327 424 1.0E-34 T 09-03-2017 IPR006641 YqgF/RNase H-like domain GO:0006139 RG43_RS01910 0ebe2941f7b973d2acc9fc3c04b89af5 773 Pfam PF09371 Tex-like protein N-terminal domain 10 194 2.7E-70 T 09-03-2017 IPR018974 Tex-like protein, N-terminal RG43_RS01910 0ebe2941f7b973d2acc9fc3c04b89af5 773 SUPERFAMILY SSF50249 638 723 3.36E-25 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS01910 0ebe2941f7b973d2acc9fc3c04b89af5 773 SUPERFAMILY SSF47781 560 632 5.56E-20 T 09-03-2017 IPR010994 RuvA domain 2-like RG43_RS01910 0ebe2941f7b973d2acc9fc3c04b89af5 773 Pfam PF00575 S1 RNA binding domain 649 720 4.2E-24 T 09-03-2017 IPR003029 S1 domain GO:0003676 RG43_RS01910 0ebe2941f7b973d2acc9fc3c04b89af5 773 Gene3D G3DSA:1.10.10.650 2 110 1.0E-46 T 09-03-2017 IPR023319 Tex-like protein, HTH domain RG43_RS01910 0ebe2941f7b973d2acc9fc3c04b89af5 773 Gene3D G3DSA:1.10.150.310 499 630 1.6E-48 T 09-03-2017 IPR023097 Tex RuvX-like domain RG43_RS01910 0ebe2941f7b973d2acc9fc3c04b89af5 773 Pfam PF16921 Tex protein YqgF-like domain 328 451 1.7E-50 T 09-03-2017 IPR032639 Tex protein, YqgF-like domain RG43_RS01910 0ebe2941f7b973d2acc9fc3c04b89af5 773 SUPERFAMILY SSF47781 470 558 5.0E-28 T 09-03-2017 IPR010994 RuvA domain 2-like RG43_RS01910 0ebe2941f7b973d2acc9fc3c04b89af5 773 SUPERFAMILY SSF158832 2 322 6.28E-122 T 09-03-2017 RG43_RS01910 0ebe2941f7b973d2acc9fc3c04b89af5 773 SUPERFAMILY SSF53098 323 469 9.36E-49 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS01910 0ebe2941f7b973d2acc9fc3c04b89af5 773 Gene3D G3DSA:3.30.420.140 328 450 7.5E-50 T 09-03-2017 IPR006641 YqgF/RNase H-like domain GO:0006139 RG43_RS15090 10c00c0561de7dcf4030f0d748031d11 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.327 T 09-03-2017 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS15090 10c00c0561de7dcf4030f0d748031d11 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 7.2E-17 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain RG43_RS15090 10c00c0561de7dcf4030f0d748031d11 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 09-03-2017 IPR006162 Phosphopantetheine attachment site RG43_RS15090 10c00c0561de7dcf4030f0d748031d11 78 Gene3D G3DSA:1.10.1200.10 3 77 8.4E-37 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain RG43_RS15090 10c00c0561de7dcf4030f0d748031d11 78 SUPERFAMILY SSF47336 2 77 1.44E-24 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain RG43_RS15090 10c00c0561de7dcf4030f0d748031d11 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 77 1.1E-38 T 09-03-2017 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS15090 10c00c0561de7dcf4030f0d748031d11 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 4.0E-4 T 09-03-2017 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS15835 d4cde8ccefd4aac4b796529242bb3092 55 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 31.965 T 09-03-2017 IPR007040 Ribosome modulation factor RG43_RS15835 d4cde8ccefd4aac4b796529242bb3092 55 Pfam PF04957 Ribosome modulation factor 1 52 1.3E-30 T 09-03-2017 IPR007040 Ribosome modulation factor RG43_RS15835 d4cde8ccefd4aac4b796529242bb3092 55 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 55 7.0E-26 T 09-03-2017 IPR007040 Ribosome modulation factor RG43_RS15835 d4cde8ccefd4aac4b796529242bb3092 55 Gene3D G3DSA:1.10.10.620 1 51 5.2E-28 T 09-03-2017 IPR023200 Ribosome modulation factor-like domain RG43_RS21485 835f433bb97f13fe3d9847357d5c580e 237 Pfam PF13099 Domain of unknown function (DUF3944) 5 39 3.7E-15 T 09-03-2017 IPR025217 Domain of unknown function DUF3944 RG43_RS21485 835f433bb97f13fe3d9847357d5c580e 237 Pfam PF03981 Ubiquinol-cytochrome C chaperone 58 220 1.9E-22 T 09-03-2017 IPR021150 Ubiquinol-cytochrome c chaperone/UPF0174 RG43_RS15400 43f80aa9c42c08085b9e300c22e49970 277 Pfam PF03783 Curli production assembly/transport component CsgG 41 255 1.3E-80 T 09-03-2017 IPR005534 Curli production assembly/transport component CsgG GO:0030288 RG43_RS01860 8924b747df2ef2fc99fc59d93ddb35c8 191 Pfam PF01106 NifU-like domain 111 177 2.6E-20 T 09-03-2017 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 RG43_RS01860 8924b747df2ef2fc99fc59d93ddb35c8 191 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 191 46.432 T 09-03-2017 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 RG43_RS01860 8924b747df2ef2fc99fc59d93ddb35c8 191 SUPERFAMILY SSF89360 1 97 2.16E-20 T 09-03-2017 IPR000361 FeS cluster biogenesis RG43_RS01860 8924b747df2ef2fc99fc59d93ddb35c8 191 SUPERFAMILY SSF117916 95 184 2.14E-25 T 09-03-2017 RG43_RS01860 8924b747df2ef2fc99fc59d93ddb35c8 191 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 2 191 1.7E-100 T 09-03-2017 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 RG43_RS01860 8924b747df2ef2fc99fc59d93ddb35c8 191 Gene3D G3DSA:2.60.300.12 1 97 2.9E-17 T 09-03-2017 IPR000361 FeS cluster biogenesis RG43_RS01860 8924b747df2ef2fc99fc59d93ddb35c8 191 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 119 177 2.0E-28 T 09-03-2017 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 RG43_RS01860 8924b747df2ef2fc99fc59d93ddb35c8 191 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 99 1.4E-12 T 09-03-2017 IPR000361 FeS cluster biogenesis RG43_RS06570 7c9094bba578bb8f20a078e537f8fb0e 466 PIRSF PIRSF006060 1 463 4.4E-74 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RG43_RS06570 7c9094bba578bb8f20a078e537f8fb0e 466 TIGRFAM TIGR01773 GABAperm: GABA permease 1 452 4.7E-258 T 09-03-2017 IPR011265 GABA permease GO:0015185|GO:0015812|GO:0016021 RG43_RS06570 7c9094bba578bb8f20a078e537f8fb0e 466 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 09-03-2017 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 RG43_RS06570 7c9094bba578bb8f20a078e537f8fb0e 466 Pfam PF00324 Amino acid permease 18 453 1.1E-125 T 09-03-2017 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 RG43_RS12080 8387e4d6f973d26cfe25cedc08bdb540 183 Gene3D G3DSA:3.40.30.10 5 182 3.9E-63 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS12080 8387e4d6f973d26cfe25cedc08bdb540 183 PRINTS PR01011 Glutathione peroxidase family signature 58 74 1.3E-19 T 09-03-2017 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 RG43_RS12080 8387e4d6f973d26cfe25cedc08bdb540 183 PRINTS PR01011 Glutathione peroxidase family signature 143 152 1.3E-19 T 09-03-2017 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 RG43_RS12080 8387e4d6f973d26cfe25cedc08bdb540 183 PRINTS PR01011 Glutathione peroxidase family signature 23 40 1.3E-19 T 09-03-2017 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 RG43_RS12080 8387e4d6f973d26cfe25cedc08bdb540 183 ProSitePatterns PS00460 Glutathione peroxidases active site. 25 40 - T 09-03-2017 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 RG43_RS12080 8387e4d6f973d26cfe25cedc08bdb540 183 Hamap MF_02061 Thioredoxin/glutathione peroxidase BtuE [btuE]. 3 183 51.403 T 09-03-2017 IPR033674 Thioredoxin/glutathione peroxidase BtuE RG43_RS12080 8387e4d6f973d26cfe25cedc08bdb540 183 PIRSF PIRSF000303 1 183 3.0E-64 T 09-03-2017 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 RG43_RS12080 8387e4d6f973d26cfe25cedc08bdb540 183 SUPERFAMILY SSF52833 6 182 3.92E-54 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS12080 8387e4d6f973d26cfe25cedc08bdb540 183 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 61 68 - T 09-03-2017 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 RG43_RS12080 8387e4d6f973d26cfe25cedc08bdb540 183 Pfam PF00255 Glutathione peroxidase 7 111 1.9E-46 T 09-03-2017 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 RG43_RS07465 c19304397ac23e2aa387684ae488c741 111 PIRSF PIRSF012296 1 111 2.9E-57 T 09-03-2017 IPR009307 Ethanolamine utilisation EutS GO:0006580 RG43_RS07465 c19304397ac23e2aa387684ae488c741 111 SUPERFAMILY SSF143414 39 107 2.62E-13 T 09-03-2017 RG43_RS07465 c19304397ac23e2aa387684ae488c741 111 SMART SM00877 39 111 7.2E-14 T 09-03-2017 IPR000249 Microcompartment protein, bacteria RG43_RS07465 c19304397ac23e2aa387684ae488c741 111 Pfam PF00936 BMC domain 40 105 1.5E-12 T 09-03-2017 IPR000249 Microcompartment protein, bacteria RG43_RS09740 3844715d11fa8fbb09a454a2846110fa 258 SUPERFAMILY SSF51366 1 257 1.41E-73 T 09-03-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RG43_RS09740 3844715d11fa8fbb09a454a2846110fa 258 Gene3D G3DSA:3.20.20.70 4 257 3.8E-89 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS09740 3844715d11fa8fbb09a454a2846110fa 258 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 45.091 T 09-03-2017 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 RG43_RS09740 3844715d11fa8fbb09a454a2846110fa 258 Pfam PF00977 Histidine biosynthesis protein 5 239 4.4E-79 T 09-03-2017 IPR006062 Histidine biosynthesis GO:0000105 RG43_RS09740 3844715d11fa8fbb09a454a2846110fa 258 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 1.5E-118 T 09-03-2017 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 RG43_RS03010 17762f76e0f81ac376f47293595200a3 84 Gene3D G3DSA:3.30.300.90 1 80 3.1E-27 T 09-03-2017 IPR002634 BolA protein RG43_RS03010 17762f76e0f81ac376f47293595200a3 84 SUPERFAMILY SSF82657 2 82 3.01E-28 T 09-03-2017 IPR002634 BolA protein RG43_RS03010 17762f76e0f81ac376f47293595200a3 84 Pfam PF01722 BolA-like protein 17 74 8.9E-14 T 09-03-2017 IPR002634 BolA protein RG43_RS03010 17762f76e0f81ac376f47293595200a3 84 PIRSF PIRSF003113 1 83 5.6E-21 T 09-03-2017 IPR002634 BolA protein RG43_RS14030 834ea683480cc9af406dc740003b7789 389 SUPERFAMILY SSF48452 105 280 5.6E-17 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS14030 834ea683480cc9af406dc740003b7789 389 SMART SM00028 141 174 470.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 RG43_RS14030 834ea683480cc9af406dc740003b7789 389 SMART SM00028 107 140 390.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 RG43_RS14030 834ea683480cc9af406dc740003b7789 389 SMART SM00028 214 247 1.4 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 RG43_RS14030 834ea683480cc9af406dc740003b7789 389 SMART SM00028 69 102 59.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 RG43_RS14030 834ea683480cc9af406dc740003b7789 389 SMART SM00028 180 213 29.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 RG43_RS14030 834ea683480cc9af406dc740003b7789 389 Gene3D G3DSA:1.25.40.10 41 313 3.8E-28 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS14030 834ea683480cc9af406dc740003b7789 389 SUPERFAMILY SSF48452 39 135 1.57E-5 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS14030 834ea683480cc9af406dc740003b7789 389 Pfam PF14559 Tetratricopeptide repeat 191 246 1.1E-6 T 09-03-2017 RG43_RS14030 834ea683480cc9af406dc740003b7789 389 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 387 37.021 T 09-03-2017 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 RG43_RS20615 a903fc4fe493421cba7148152cf5d580 810 Gene3D G3DSA:2.40.160.50 708 807 6.9E-20 T 09-03-2017 RG43_RS20615 a903fc4fe493421cba7148152cf5d580 810 Gene3D G3DSA:2.40.160.50 392 669 6.9E-20 T 09-03-2017 RG43_RS20615 a903fc4fe493421cba7148152cf5d580 810 Pfam PF01103 Surface antigen 448 810 8.6E-106 T 09-03-2017 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020 RG43_RS20615 a903fc4fe493421cba7148152cf5d580 810 Pfam PF07244 Surface antigen variable number repeat 348 421 4.1E-13 T 09-03-2017 IPR010827 Surface antigen variable number GO:0019867 RG43_RS20615 a903fc4fe493421cba7148152cf5d580 810 Pfam PF07244 Surface antigen variable number repeat 92 172 1.1E-10 T 09-03-2017 IPR010827 Surface antigen variable number GO:0019867 RG43_RS20615 a903fc4fe493421cba7148152cf5d580 810 Pfam PF07244 Surface antigen variable number repeat 266 344 3.6E-11 T 09-03-2017 IPR010827 Surface antigen variable number GO:0019867 RG43_RS20615 a903fc4fe493421cba7148152cf5d580 810 Pfam PF07244 Surface antigen variable number repeat 176 263 5.9E-16 T 09-03-2017 IPR010827 Surface antigen variable number GO:0019867 RG43_RS20615 a903fc4fe493421cba7148152cf5d580 810 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 810 26.299 T 09-03-2017 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 RG43_RS20615 a903fc4fe493421cba7148152cf5d580 810 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 810 1.6E-286 T 09-03-2017 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 RG43_RS20615 a903fc4fe493421cba7148152cf5d580 810 PIRSF PIRSF006076 1 810 1.1E-259 T 09-03-2017 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 RG43_RS04725 283556662778a950659ca0f3b0157a2a 222 SUPERFAMILY SSF46689 32 100 7.7E-15 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS04725 283556662778a950659ca0f3b0157a2a 222 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 56 1.2E-9 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RG43_RS04725 283556662778a950659ca0f3b0157a2a 222 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 64 87 1.2E-9 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RG43_RS04725 283556662778a950659ca0f3b0157a2a 222 Pfam PF00440 Bacterial regulatory proteins, tetR family 44 89 4.0E-16 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RG43_RS04725 283556662778a950659ca0f3b0157a2a 222 ProSitePatterns PS01081 TetR-type HTH domain signature. 55 86 - T 09-03-2017 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RG43_RS04725 283556662778a950659ca0f3b0157a2a 222 Gene3D G3DSA:1.10.357.10 38 205 1.2E-24 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RG43_RS12840 1c2eabae3ddebbbe92996cf364c78f50 130 Pfam PF04076 Bacterial OB fold (BOF) protein 30 130 3.0E-42 T 09-03-2017 IPR005220 Bacterial OB-fold RG43_RS12840 1c2eabae3ddebbbe92996cf364c78f50 130 TIGRFAM TIGR00156 TIGR00156: TIGR00156 family protein 1 130 1.3E-60 T 09-03-2017 IPR016052 Bacteriophage 933W, L0136 RG43_RS12840 1c2eabae3ddebbbe92996cf364c78f50 130 Gene3D G3DSA:2.40.50.200 29 130 2.5E-29 T 09-03-2017 IPR005220 Bacterial OB-fold RG43_RS12840 1c2eabae3ddebbbe92996cf364c78f50 130 SUPERFAMILY SSF101756 30 130 3.01E-27 T 09-03-2017 IPR005220 Bacterial OB-fold RG43_RS11115 9f83343c7d401b23887a4697b5918439 366 SUPERFAMILY SSF48695 18 179 1.17E-47 T 09-03-2017 IPR011031 Multihaem cytochrome RG43_RS11115 9f83343c7d401b23887a4697b5918439 366 Gene3D G3DSA:1.10.3820.10 5 176 3.1E-27 T 09-03-2017 RG43_RS11115 9f83343c7d401b23887a4697b5918439 366 Gene3D G3DSA:1.10.3820.10 312 318 3.1E-27 T 09-03-2017 RG43_RS11115 9f83343c7d401b23887a4697b5918439 366 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 6 174 2.0E-66 T 09-03-2017 IPR005126 NapC/NirT cytochrome c, N-terminal RG43_RS11115 9f83343c7d401b23887a4697b5918439 366 PIRSF PIRSF000014 1 366 2.6E-156 T 09-03-2017 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 RG43_RS00845 a9b5398597a91e8688b456d0832e1a80 328 SUPERFAMILY SSF53850 134 265 2.01E-5 T 09-03-2017 RG43_RS00845 a9b5398597a91e8688b456d0832e1a80 328 PIRSF PIRSF006470 1 328 3.3E-102 T 09-03-2017 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 RG43_RS00845 a9b5398597a91e8688b456d0832e1a80 328 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 30 312 4.1E-104 T 09-03-2017 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 RG43_RS00845 a9b5398597a91e8688b456d0832e1a80 328 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 30 286 1.1E-110 T 09-03-2017 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 RG43_RS11805 1db37a45f5e95b35d6e07511322eb334 651 SMART SM00436 128 223 3.8E-37 T 09-03-2017 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 RG43_RS11805 1db37a45f5e95b35d6e07511322eb334 651 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 317 332 - T 09-03-2017 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 RG43_RS11805 1db37a45f5e95b35d6e07511322eb334 651 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 649 0.0 T 09-03-2017 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 RG43_RS11805 1db37a45f5e95b35d6e07511322eb334 651 Gene3D G3DSA:1.10.460.10 490 607 5.0E-53 T 09-03-2017 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 RG43_RS11805 1db37a45f5e95b35d6e07511322eb334 651 Gene3D G3DSA:1.10.460.10 158 217 5.0E-53 T 09-03-2017 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 RG43_RS11805 1db37a45f5e95b35d6e07511322eb334 651 Pfam PF01751 Toprim domain 3 135 1.3E-17 T 09-03-2017 IPR006171 Toprim domain RG43_RS11805 1db37a45f5e95b35d6e07511322eb334 651 Pfam PF01131 DNA topoisomerase 158 593 3.0E-114 T 09-03-2017 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 RG43_RS11805 1db37a45f5e95b35d6e07511322eb334 651 SUPERFAMILY SSF56712 1 607 2.22E-189 T 09-03-2017 IPR023405 DNA topoisomerase, type IA, core domain RG43_RS11805 1db37a45f5e95b35d6e07511322eb334 651 Hamap MF_00953 DNA topoisomerase 3 [topB]. 1 645 70.836 T 09-03-2017 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 RG43_RS11805 1db37a45f5e95b35d6e07511322eb334 651 Gene3D G3DSA:2.70.20.10 369 488 1.5E-49 T 09-03-2017 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 RG43_RS11805 1db37a45f5e95b35d6e07511322eb334 651 Gene3D G3DSA:2.70.20.10 219 252 1.5E-49 T 09-03-2017 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 RG43_RS11805 1db37a45f5e95b35d6e07511322eb334 651 SMART SM00493 1 124 2.9E-31 T 09-03-2017 IPR006171 Toprim domain RG43_RS11805 1db37a45f5e95b35d6e07511322eb334 651 SMART SM00437 280 558 9.6E-110 T 09-03-2017 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 RG43_RS11805 1db37a45f5e95b35d6e07511322eb334 651 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 193 211 7.6E-26 T 09-03-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RG43_RS11805 1db37a45f5e95b35d6e07511322eb334 651 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 323 332 7.6E-26 T 09-03-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RG43_RS11805 1db37a45f5e95b35d6e07511322eb334 651 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 402 418 7.6E-26 T 09-03-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RG43_RS11805 1db37a45f5e95b35d6e07511322eb334 651 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 521 535 7.6E-26 T 09-03-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RG43_RS11805 1db37a45f5e95b35d6e07511322eb334 651 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 98 111 7.6E-26 T 09-03-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RG43_RS11805 1db37a45f5e95b35d6e07511322eb334 651 Gene3D G3DSA:3.40.50.140 1 154 5.7E-47 T 09-03-2017 IPR006171 Toprim domain RG43_RS23800 d7fac8c3b32b51f5695354313167117d 127 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 69 123 4.1E-17 T 09-03-2017 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 RG43_RS23800 d7fac8c3b32b51f5695354313167117d 127 PRINTS PR01650 Bacterial translocase SecE signature 65 85 1.0E-41 T 09-03-2017 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 RG43_RS23800 d7fac8c3b32b51f5695354313167117d 127 PRINTS PR01650 Bacterial translocase SecE signature 109 125 1.0E-41 T 09-03-2017 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 RG43_RS23800 d7fac8c3b32b51f5695354313167117d 127 PRINTS PR01650 Bacterial translocase SecE signature 89 109 1.0E-41 T 09-03-2017 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 RG43_RS23800 d7fac8c3b32b51f5695354313167117d 127 PRINTS PR01650 Bacterial translocase SecE signature 44 65 1.0E-41 T 09-03-2017 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 RG43_RS23800 d7fac8c3b32b51f5695354313167117d 127 Hamap MF_00422 Protein translocase subunit SecE [secE]. 67 121 13.188 T 09-03-2017 IPR022943 Preprotein translocase subunit SecE Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 RG43_RS23800 d7fac8c3b32b51f5695354313167117d 127 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 70 122 3.5E-20 T 09-03-2017 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 RG43_RS23800 d7fac8c3b32b51f5695354313167117d 127 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 71 99 - T 09-03-2017 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 RG43_RS23800 d7fac8c3b32b51f5695354313167117d 127 Gene3D G3DSA:1.20.5.1030 64 123 3.1E-25 T 09-03-2017 RG43_RS19000 0e45b31dbd48b4685a1831b0524fc60d 229 Pfam PF00072 Response regulator receiver domain 5 117 4.4E-29 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS19000 0e45b31dbd48b4685a1831b0524fc60d 229 SUPERFAMILY SSF52172 3 184 2.57E-43 T 09-03-2017 IPR011006 CheY-like superfamily RG43_RS19000 0e45b31dbd48b4685a1831b0524fc60d 229 SMART SM00448 3 116 6.2E-46 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS19000 0e45b31dbd48b4685a1831b0524fc60d 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 1.3E-28 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RG43_RS19000 0e45b31dbd48b4685a1831b0524fc60d 229 Gene3D G3DSA:3.40.50.2300 3 124 2.8E-41 T 09-03-2017 RG43_RS19000 0e45b31dbd48b4685a1831b0524fc60d 229 SMART SM00862 150 225 1.8E-28 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RG43_RS19000 0e45b31dbd48b4685a1831b0524fc60d 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 5.0E-117 T 09-03-2017 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 RG43_RS19000 0e45b31dbd48b4685a1831b0524fc60d 229 Gene3D G3DSA:1.10.10.10 129 226 1.0E-36 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS26760 a877b45cd5ab13c71ade9f179fbb0c9c 134 Pfam PF03928 Haem-degrading 7 129 1.4E-32 T 09-03-2017 IPR005624 Haem-degrading RG43_RS26760 a877b45cd5ab13c71ade9f179fbb0c9c 134 SUPERFAMILY SSF143744 2 132 1.26E-36 T 09-03-2017 RG43_RS04385 a877b45cd5ab13c71ade9f179fbb0c9c 134 Pfam PF03928 Haem-degrading 7 129 1.4E-32 T 09-03-2017 IPR005624 Haem-degrading RG43_RS04385 a877b45cd5ab13c71ade9f179fbb0c9c 134 SUPERFAMILY SSF143744 2 132 1.26E-36 T 09-03-2017 RG43_RS22255 d14ba95667ec939b3c82f5d87a3b9a28 128 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 126 7.7E-54 T 09-03-2017 IPR006056 RidA family RG43_RS22255 d14ba95667ec939b3c82f5d87a3b9a28 128 Pfam PF01042 Endoribonuclease L-PSP 7 126 2.0E-45 T 09-03-2017 IPR006175 YjgF/YER057c/UK114 family RG43_RS22255 d14ba95667ec939b3c82f5d87a3b9a28 128 SUPERFAMILY SSF55298 4 127 6.28E-44 T 09-03-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RG43_RS22255 d14ba95667ec939b3c82f5d87a3b9a28 128 Gene3D G3DSA:3.30.1330.40 3 127 2.8E-47 T 09-03-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RG43_RS22255 d14ba95667ec939b3c82f5d87a3b9a28 128 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 103 121 - T 09-03-2017 IPR019897 RidA, conserved site RG43_RS25665 00ef9aa376c84f300e0db14f1bbfb3a3 804 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 804 117.009 T 09-03-2017 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RG43_RS25665 00ef9aa376c84f300e0db14f1bbfb3a3 804 SUPERFAMILY SSF56719 730 795 6.02E-87 T 09-03-2017 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 RG43_RS25665 00ef9aa376c84f300e0db14f1bbfb3a3 804 SUPERFAMILY SSF56719 394 560 6.02E-87 T 09-03-2017 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 RG43_RS25665 00ef9aa376c84f300e0db14f1bbfb3a3 804 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 732 793 2.6E-30 T 09-03-2017 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RG43_RS25665 00ef9aa376c84f300e0db14f1bbfb3a3 804 Gene3D G3DSA:3.30.565.10 15 218 1.7E-92 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS25665 00ef9aa376c84f300e0db14f1bbfb3a3 804 SMART SM00433 35 797 1.7E-282 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS25665 00ef9aa376c84f300e0db14f1bbfb3a3 804 Pfam PF00204 DNA gyrase B 221 390 2.8E-59 T 09-03-2017 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS25665 00ef9aa376c84f300e0db14f1bbfb3a3 804 SUPERFAMILY SSF55874 4 220 1.22E-77 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS25665 00ef9aa376c84f300e0db14f1bbfb3a3 804 PRINTS PR00418 DNA topoisomerase II family signature 487 503 5.3E-71 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS25665 00ef9aa376c84f300e0db14f1bbfb3a3 804 PRINTS PR00418 DNA topoisomerase II family signature 525 537 5.3E-71 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS25665 00ef9aa376c84f300e0db14f1bbfb3a3 804 PRINTS PR00418 DNA topoisomerase II family signature 736 752 5.3E-71 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS25665 00ef9aa376c84f300e0db14f1bbfb3a3 804 PRINTS PR00418 DNA topoisomerase II family signature 113 127 5.3E-71 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS25665 00ef9aa376c84f300e0db14f1bbfb3a3 804 PRINTS PR00418 DNA topoisomerase II family signature 268 281 5.3E-71 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS25665 00ef9aa376c84f300e0db14f1bbfb3a3 804 PRINTS PR00418 DNA topoisomerase II family signature 505 522 5.3E-71 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS25665 00ef9aa376c84f300e0db14f1bbfb3a3 804 PRINTS PR00418 DNA topoisomerase II family signature 35 50 5.3E-71 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS25665 00ef9aa376c84f300e0db14f1bbfb3a3 804 PRINTS PR00418 DNA topoisomerase II family signature 70 83 5.3E-71 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS25665 00ef9aa376c84f300e0db14f1bbfb3a3 804 PRINTS PR00418 DNA topoisomerase II family signature 420 434 5.3E-71 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS25665 00ef9aa376c84f300e0db14f1bbfb3a3 804 Pfam PF01751 Toprim domain 419 531 2.3E-18 T 09-03-2017 IPR006171 Toprim domain RG43_RS25665 00ef9aa376c84f300e0db14f1bbfb3a3 804 Gene3D G3DSA:3.40.50.670 404 550 1.1E-101 T 09-03-2017 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS25665 00ef9aa376c84f300e0db14f1bbfb3a3 804 Gene3D G3DSA:3.40.50.670 718 786 1.1E-101 T 09-03-2017 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS25665 00ef9aa376c84f300e0db14f1bbfb3a3 804 Gene3D G3DSA:3.30.230.10 220 392 1.2E-78 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RG43_RS25665 00ef9aa376c84f300e0db14f1bbfb3a3 804 ProSitePatterns PS00177 DNA topoisomerase II signature. 422 430 - T 09-03-2017 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS25665 00ef9aa376c84f300e0db14f1bbfb3a3 804 SMART SM00387 31 175 2.6E-30 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS25665 00ef9aa376c84f300e0db14f1bbfb3a3 804 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 804 0.0 T 09-03-2017 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RG43_RS25665 00ef9aa376c84f300e0db14f1bbfb3a3 804 SUPERFAMILY SSF54211 221 392 5.12E-62 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold RG43_RS25665 00ef9aa376c84f300e0db14f1bbfb3a3 804 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 174 6.7E-24 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS25665 00ef9aa376c84f300e0db14f1bbfb3a3 804 PRINTS PR01159 DNA gyrase subunit B signature 360 374 1.6E-80 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RG43_RS25665 00ef9aa376c84f300e0db14f1bbfb3a3 804 PRINTS PR01159 DNA gyrase subunit B signature 470 479 1.6E-80 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RG43_RS25665 00ef9aa376c84f300e0db14f1bbfb3a3 804 PRINTS PR01159 DNA gyrase subunit B signature 196 209 1.6E-80 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RG43_RS25665 00ef9aa376c84f300e0db14f1bbfb3a3 804 PRINTS PR01159 DNA gyrase subunit B signature 312 328 1.6E-80 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RG43_RS25665 00ef9aa376c84f300e0db14f1bbfb3a3 804 PRINTS PR01159 DNA gyrase subunit B signature 181 196 1.6E-80 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RG43_RS25665 00ef9aa376c84f300e0db14f1bbfb3a3 804 PRINTS PR01159 DNA gyrase subunit B signature 757 769 1.6E-80 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RG43_RS25665 00ef9aa376c84f300e0db14f1bbfb3a3 804 PRINTS PR01159 DNA gyrase subunit B signature 773 789 1.6E-80 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RG43_RS25665 00ef9aa376c84f300e0db14f1bbfb3a3 804 PRINTS PR01159 DNA gyrase subunit B signature 5 15 1.6E-80 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RG43_RS25665 00ef9aa376c84f300e0db14f1bbfb3a3 804 PRINTS PR01159 DNA gyrase subunit B signature 220 242 1.6E-80 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RG43_RS25665 00ef9aa376c84f300e0db14f1bbfb3a3 804 PRINTS PR01159 DNA gyrase subunit B signature 374 394 1.6E-80 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RG43_RS06180 d704b1bbe3e75c57e0615d58afeeec03 212 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 14 190 9.1E-45 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal RG43_RS06180 d704b1bbe3e75c57e0615d58afeeec03 212 SMART SM01007 13 192 5.4E-56 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal RG43_RS06180 d704b1bbe3e75c57e0615d58afeeec03 212 SUPERFAMILY SSF53639 7 211 9.42E-60 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal RG43_RS06180 d704b1bbe3e75c57e0615d58afeeec03 212 Gene3D G3DSA:3.40.225.10 8 211 1.5E-65 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal RG43_RS09390 e804f464afce9f3d406aca29b37b1cd4 259 Gene3D G3DSA:3.40.50.1360 84 231 4.9E-19 T 09-03-2017 RG43_RS09390 e804f464afce9f3d406aca29b37b1cd4 259 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 40 58 3.1E-5 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RG43_RS09390 e804f464afce9f3d406aca29b37b1cd4 259 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 26 40 3.1E-5 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RG43_RS09390 e804f464afce9f3d406aca29b37b1cd4 259 SUPERFAMILY SSF100950 83 245 5.98E-34 T 09-03-2017 RG43_RS09390 e804f464afce9f3d406aca29b37b1cd4 259 SMART SM00420 8 60 2.2E-18 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RG43_RS09390 e804f464afce9f3d406aca29b37b1cd4 259 Pfam PF00455 DeoR C terminal sensor domain 85 238 4.4E-51 T 09-03-2017 IPR014036 DeoR C-terminal sensor domain RG43_RS09390 e804f464afce9f3d406aca29b37b1cd4 259 Gene3D G3DSA:1.10.10.10 7 65 1.3E-8 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS09390 e804f464afce9f3d406aca29b37b1cd4 259 Pfam PF08220 DeoR-like helix-turn-helix domain 8 60 2.8E-16 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RG43_RS09390 e804f464afce9f3d406aca29b37b1cd4 259 SUPERFAMILY SSF46785 7 63 5.88E-13 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS09390 e804f464afce9f3d406aca29b37b1cd4 259 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 09-03-2017 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 RG43_RS09390 e804f464afce9f3d406aca29b37b1cd4 259 SMART SM01134 80 240 2.4E-66 T 09-03-2017 RG43_RS07395 79b6ef71cfaeeedf7a3ceaa532149eec 232 Pfam PF02230 Phospholipase/Carboxylesterase 4 209 3.1E-56 T 09-03-2017 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 RG43_RS07395 79b6ef71cfaeeedf7a3ceaa532149eec 232 Gene3D G3DSA:3.40.50.1820 7 207 5.0E-33 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS07395 79b6ef71cfaeeedf7a3ceaa532149eec 232 SUPERFAMILY SSF53474 5 206 2.04E-31 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS05185 83bddd0a987410c35d7911df4a93d36f 297 Gene3D G3DSA:1.10.10.10 1 73 6.9E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS05185 83bddd0a987410c35d7911df4a93d36f 297 Gene3D G3DSA:3.40.190.10 92 196 1.5E-38 T 09-03-2017 RG43_RS05185 83bddd0a987410c35d7911df4a93d36f 297 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 296 58.997 T 09-03-2017 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria RG43_RS05185 83bddd0a987410c35d7911df4a93d36f 297 SUPERFAMILY SSF46785 4 110 7.37E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS05185 83bddd0a987410c35d7911df4a93d36f 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 9.4E-19 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS05185 83bddd0a987410c35d7911df4a93d36f 297 SUPERFAMILY SSF53850 92 289 1.57E-18 T 09-03-2017 RG43_RS05185 83bddd0a987410c35d7911df4a93d36f 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 5.5E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS05185 83bddd0a987410c35d7911df4a93d36f 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 5.5E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS05185 83bddd0a987410c35d7911df4a93d36f 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 5.5E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS05185 83bddd0a987410c35d7911df4a93d36f 297 Pfam PF03466 LysR substrate binding domain 93 288 1.2E-11 T 09-03-2017 IPR005119 LysR, substrate-binding RG43_RS05185 83bddd0a987410c35d7911df4a93d36f 297 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 5 293 9.4E-113 T 09-03-2017 IPR017685 HTH-type transcriptional regulator ArgP RG43_RS06785 2bd5a8fb134fe9a38d1f20a993c17773 107 PIRSF PIRSF034456 1 106 1.3E-59 T 09-03-2017 IPR017028 Uncharacterised conserved protein UCP034456 RG43_RS06785 2bd5a8fb134fe9a38d1f20a993c17773 107 Pfam PF10043 Predicted periplasmic lipoprotein (DUF2279) 24 100 4.8E-10 T 09-03-2017 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein RG43_RS20560 7d8900ff5e7b7174d3a4414ca7fe7d1b 437 Pfam PF09179 TilS substrate binding domain 241 308 1.9E-19 T 09-03-2017 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RG43_RS20560 7d8900ff5e7b7174d3a4414ca7fe7d1b 437 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 356 401 1.6E-16 T 09-03-2017 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RG43_RS20560 7d8900ff5e7b7174d3a4414ca7fe7d1b 437 SUPERFAMILY SSF56037 319 421 1.96E-31 T 09-03-2017 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 RG43_RS20560 7d8900ff5e7b7174d3a4414ca7fe7d1b 437 Gene3D G3DSA:3.40.50.620 7 173 9.2E-12 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS20560 7d8900ff5e7b7174d3a4414ca7fe7d1b 437 Pfam PF01171 PP-loop family 14 191 8.5E-62 T 09-03-2017 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 RG43_RS20560 7d8900ff5e7b7174d3a4414ca7fe7d1b 437 SUPERFAMILY SSF52402 3 226 8.82E-67 T 09-03-2017 RG43_RS20560 7d8900ff5e7b7174d3a4414ca7fe7d1b 437 SUPERFAMILY SSF82829 227 312 1.31E-26 T 09-03-2017 RG43_RS20560 7d8900ff5e7b7174d3a4414ca7fe7d1b 437 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 5 300 23.984 T 09-03-2017 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RG43_RS20560 7d8900ff5e7b7174d3a4414ca7fe7d1b 437 SMART SM00977 356 427 1.7E-25 T 09-03-2017 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RG43_RS20560 7d8900ff5e7b7174d3a4414ca7fe7d1b 437 Pfam PF11734 TilS substrate C-terminal domain 356 425 1.1E-25 T 09-03-2017 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RG43_RS20560 7d8900ff5e7b7174d3a4414ca7fe7d1b 437 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 14 196 1.6E-53 T 09-03-2017 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RG43_RS14455 04a2ee16744fe2b52290f8ce9c2ab392 76 Pfam PF06150 ChaB 9 75 9.6E-28 T 09-03-2017 IPR009317 ChaB RG43_RS14455 04a2ee16744fe2b52290f8ce9c2ab392 76 SUPERFAMILY SSF140376 2 75 9.29E-29 T 09-03-2017 RG43_RS09095 d323ea80c071d35d195ec7b013d7badc 294 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 09-03-2017 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 RG43_RS09095 d323ea80c071d35d195ec7b013d7badc 294 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 31 286 3.8E-86 T 09-03-2017 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 RG43_RS09095 d323ea80c071d35d195ec7b013d7badc 294 SUPERFAMILY SSF53927 1 148 6.52E-41 T 09-03-2017 IPR016193 Cytidine deaminase-like GO:0003824 RG43_RS09095 d323ea80c071d35d195ec7b013d7badc 294 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 60 139 1.9E-11 T 09-03-2017 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 RG43_RS09095 d323ea80c071d35d195ec7b013d7badc 294 SUPERFAMILY SSF53927 152 293 4.02E-45 T 09-03-2017 IPR016193 Cytidine deaminase-like GO:0003824 RG43_RS09095 d323ea80c071d35d195ec7b013d7badc 294 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 276 4.7E-45 T 09-03-2017 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 RG43_RS09095 d323ea80c071d35d195ec7b013d7badc 294 Gene3D G3DSA:3.40.140.10 34 177 2.9E-43 T 09-03-2017 RG43_RS09095 d323ea80c071d35d195ec7b013d7badc 294 PIRSF PIRSF006334 14 293 1.2E-106 T 09-03-2017 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 RG43_RS09095 d323ea80c071d35d195ec7b013d7badc 294 Gene3D G3DSA:3.40.140.10 189 292 4.2E-25 T 09-03-2017 RG43_RS09095 d323ea80c071d35d195ec7b013d7badc 294 Hamap MF_01558 Cytidine deaminase [cdd]. 1 292 49.766 T 09-03-2017 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 RG43_RS13320 5256d8e6f65bab07da76e9b0662aa95c 700 SUPERFAMILY SSF56935 25 696 2.75E-121 T 09-03-2017 RG43_RS13320 5256d8e6f65bab07da76e9b0662aa95c 700 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 42 694 6.8E-67 T 09-03-2017 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 RG43_RS13320 5256d8e6f65bab07da76e9b0662aa95c 700 Pfam PF00593 TonB dependent receptor 448 695 3.8E-36 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RG43_RS13320 5256d8e6f65bab07da76e9b0662aa95c 700 Gene3D G3DSA:2.170.130.10 28 151 2.5E-28 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RG43_RS13320 5256d8e6f65bab07da76e9b0662aa95c 700 Pfam PF07715 TonB-dependent Receptor Plug Domain 40 151 1.9E-22 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RG43_RS13320 5256d8e6f65bab07da76e9b0662aa95c 700 Gene3D G3DSA:2.40.170.20 152 695 2.8E-110 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RG43_RS11050 db2e3c084006558580720ebb1e4eee96 553 SMART SM00304 214 266 1.5E-11 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RG43_RS11050 db2e3c084006558580720ebb1e4eee96 553 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 326 513 2.3E-68 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RG43_RS11050 db2e3c084006558580720ebb1e4eee96 553 SUPERFAMILY SSF58104 235 522 2.09E-76 T 09-03-2017 RG43_RS11050 db2e3c084006558580720ebb1e4eee96 553 Gene3D G3DSA:1.20.120.30 36 179 1.6E-52 T 09-03-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 RG43_RS11050 db2e3c084006558580720ebb1e4eee96 553 Gene3D G3DSA:1.10.287.950 282 486 1.1E-64 T 09-03-2017 RG43_RS11050 db2e3c084006558580720ebb1e4eee96 553 Pfam PF02203 Tar ligand binding domain homologue 1 169 8.9E-45 T 09-03-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 RG43_RS11050 db2e3c084006558580720ebb1e4eee96 553 SMART SM00319 44 180 1.4E-43 T 09-03-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 RG43_RS11050 db2e3c084006558580720ebb1e4eee96 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 288 317 3.7E-91 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RG43_RS11050 db2e3c084006558580720ebb1e4eee96 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 3.7E-91 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RG43_RS11050 db2e3c084006558580720ebb1e4eee96 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 3.7E-91 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RG43_RS11050 db2e3c084006558580720ebb1e4eee96 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 365 392 3.7E-91 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RG43_RS11050 db2e3c084006558580720ebb1e4eee96 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 189 209 3.7E-91 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RG43_RS11050 db2e3c084006558580720ebb1e4eee96 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 442 471 3.7E-91 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RG43_RS11050 db2e3c084006558580720ebb1e4eee96 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 394 423 3.7E-91 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RG43_RS11050 db2e3c084006558580720ebb1e4eee96 553 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 292 314 - T 09-03-2017 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site RG43_RS11050 db2e3c084006558580720ebb1e4eee96 553 Pfam PF00672 HAMP domain 194 262 1.1E-13 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RG43_RS11050 db2e3c084006558580720ebb1e4eee96 553 SMART SM00283 267 514 7.0E-96 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RG43_RS11050 db2e3c084006558580720ebb1e4eee96 553 SUPERFAMILY SSF47170 39 178 1.23E-47 T 09-03-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 RG43_RS25295 6494d5124a76d6bf0ed4e546c529bb35 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 545 4.2E-216 T 09-03-2017 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 RG43_RS25295 6494d5124a76d6bf0ed4e546c529bb35 548 Gene3D G3DSA:3.40.50.970 335 537 2.4E-72 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS25295 6494d5124a76d6bf0ed4e546c529bb35 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 166 2.8E-57 T 09-03-2017 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 RG43_RS25295 6494d5124a76d6bf0ed4e546c529bb35 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 411 430 - T 09-03-2017 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 RG43_RS25295 6494d5124a76d6bf0ed4e546c529bb35 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 186 321 5.3E-42 T 09-03-2017 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 RG43_RS25295 6494d5124a76d6bf0ed4e546c529bb35 548 SUPERFAMILY SSF52518 357 546 1.59E-65 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS25295 6494d5124a76d6bf0ed4e546c529bb35 548 Gene3D G3DSA:3.40.50.1220 183 334 1.2E-58 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain RG43_RS25295 6494d5124a76d6bf0ed4e546c529bb35 548 Gene3D G3DSA:3.40.50.970 1 171 4.2E-73 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS25295 6494d5124a76d6bf0ed4e546c529bb35 548 SUPERFAMILY SSF52467 181 342 1.9E-58 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain RG43_RS25295 6494d5124a76d6bf0ed4e546c529bb35 548 SUPERFAMILY SSF52518 1 174 2.18E-63 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS25295 6494d5124a76d6bf0ed4e546c529bb35 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 374 522 8.9E-50 T 09-03-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RG43_RS03495 72470d987b5bc23b7fd4e58c788d5b07 495 SMART SM00858 10 81 8.8E-18 T 09-03-2017 IPR013974 SAF domain Reactome: R-HSA-4085001 RG43_RS03495 72470d987b5bc23b7fd4e58c788d5b07 495 Pfam PF08666 SAF domain 10 81 2.0E-16 T 09-03-2017 IPR013974 SAF domain Reactome: R-HSA-4085001 RG43_RS03495 72470d987b5bc23b7fd4e58c788d5b07 495 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 107 494 7.1E-155 T 09-03-2017 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 RG43_RS06795 82e613d7f3698a9d2529bed919ab5abf 886 SUPERFAMILY SSF56059 481 687 1.57E-27 T 09-03-2017 RG43_RS06795 82e613d7f3698a9d2529bed919ab5abf 886 Gene3D G3DSA:3.40.630.30 718 877 4.7E-26 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS06795 82e613d7f3698a9d2529bed919ab5abf 886 Pfam PF00583 Acetyltransferase (GNAT) family 790 863 4.8E-10 T 09-03-2017 IPR000182 GNAT domain GO:0008080 RG43_RS06795 82e613d7f3698a9d2529bed919ab5abf 886 Pfam PF13380 CoA binding domain 13 129 7.0E-21 T 09-03-2017 IPR003781 CoA-binding GO:0048037 RG43_RS06795 82e613d7f3698a9d2529bed919ab5abf 886 Gene3D G3DSA:3.40.50.261 128 279 3.8E-24 T 09-03-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 RG43_RS06795 82e613d7f3698a9d2529bed919ab5abf 886 SUPERFAMILY SSF52210 125 286 9.68E-36 T 09-03-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 RG43_RS06795 82e613d7f3698a9d2529bed919ab5abf 886 Gene3D G3DSA:3.30.470.20 488 589 8.5E-5 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RG43_RS06795 82e613d7f3698a9d2529bed919ab5abf 886 SUPERFAMILY SSF52210 287 447 2.62E-38 T 09-03-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 RG43_RS06795 82e613d7f3698a9d2529bed919ab5abf 886 Pfam PF13549 ATP-grasp domain 472 694 4.3E-75 T 09-03-2017 RG43_RS06795 82e613d7f3698a9d2529bed919ab5abf 886 SUPERFAMILY SSF51735 2 136 7.16E-32 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS06795 82e613d7f3698a9d2529bed919ab5abf 886 Gene3D G3DSA:3.40.50.720 1 127 1.1E-33 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS06795 82e613d7f3698a9d2529bed919ab5abf 886 SMART SM00881 9 104 1.8E-23 T 09-03-2017 IPR003781 CoA-binding GO:0048037 RG43_RS06795 82e613d7f3698a9d2529bed919ab5abf 886 Gene3D G3DSA:3.40.50.261 280 439 8.7E-16 T 09-03-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 RG43_RS06795 82e613d7f3698a9d2529bed919ab5abf 886 SUPERFAMILY SSF55729 707 866 4.88E-22 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS06795 82e613d7f3698a9d2529bed919ab5abf 886 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 147 280 2.8E-46 T 09-03-2017 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain RG43_RS00815 471a995fcc680feb18abed433f5112d6 466 Gene3D G3DSA:1.20.1250.20 244 413 7.9E-4 T 09-03-2017 RG43_RS00815 471a995fcc680feb18abed433f5112d6 466 Gene3D G3DSA:1.20.1250.20 40 221 2.2E-15 T 09-03-2017 RG43_RS00815 471a995fcc680feb18abed433f5112d6 466 Pfam PF13347 MFS/sugar transport protein 27 448 2.8E-81 T 09-03-2017 RG43_RS00815 471a995fcc680feb18abed433f5112d6 466 SUPERFAMILY SSF103473 29 405 1.57E-25 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS00815 471a995fcc680feb18abed433f5112d6 466 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 25 462 1.0E-99 T 09-03-2017 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 RG43_RS01465 4c532c8f2507fa824bd9c5f57e0b4c11 911 Gene3D G3DSA:3.40.50.300 14 241 1.6E-60 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS01465 4c532c8f2507fa824bd9c5f57e0b4c11 911 Gene3D G3DSA:3.40.50.300 268 500 1.6E-71 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS01465 4c532c8f2507fa824bd9c5f57e0b4c11 911 SMART SM00382 37 225 0.024 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS01465 4c532c8f2507fa824bd9c5f57e0b4c11 911 SMART SM00382 301 492 1.3E-9 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS01465 4c532c8f2507fa824bd9c5f57e0b4c11 911 SUPERFAMILY SSF52540 276 498 2.18E-62 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS01465 4c532c8f2507fa824bd9c5f57e0b4c11 911 SUPERFAMILY SSF52540 15 239 1.36E-54 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS01465 4c532c8f2507fa824bd9c5f57e0b4c11 911 Pfam PF12698 ABC-2 family transporter protein 569 903 4.4E-38 T 09-03-2017 RG43_RS01465 4c532c8f2507fa824bd9c5f57e0b4c11 911 Pfam PF00005 ABC transporter 293 436 4.8E-27 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS01465 4c532c8f2507fa824bd9c5f57e0b4c11 911 Pfam PF00005 ABC transporter 28 175 2.4E-25 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS01465 4c532c8f2507fa824bd9c5f57e0b4c11 911 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS13240 9590f9fd1044dc55244d17cf3662bdba 75 Pfam PF01361 Tautomerase enzyme 2 53 4.0E-14 T 09-03-2017 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 RG43_RS13240 9590f9fd1044dc55244d17cf3662bdba 75 SUPERFAMILY SSF55331 2 74 1.55E-17 T 09-03-2017 IPR014347 Tautomerase/MIF superfamily RG43_RS13240 9590f9fd1044dc55244d17cf3662bdba 75 PIRSF PIRSF037799 1 75 1.6E-32 T 09-03-2017 IPR017284 Tautomerase PptA GO:0005737|GO:0016862 RG43_RS13240 9590f9fd1044dc55244d17cf3662bdba 75 Hamap MF_00718 Tautomerase PptA [pptA]. 1 75 30.124 T 09-03-2017 IPR017284 Tautomerase PptA GO:0005737|GO:0016862 RG43_RS13240 9590f9fd1044dc55244d17cf3662bdba 75 Gene3D G3DSA:3.30.429.20 1 53 2.0E-10 T 09-03-2017 RG43_RS14180 a5c9a53ca05f4758196fa49d92b2fb7b 168 Pfam PF05974 Domain of unknown function (DUF892) 5 155 1.4E-47 T 09-03-2017 IPR010287 Domain of unknown function DUF892 RG43_RS14180 a5c9a53ca05f4758196fa49d92b2fb7b 168 SUPERFAMILY SSF47240 5 155 2.65E-44 T 09-03-2017 IPR009078 Ferritin-like superfamily RG43_RS14180 a5c9a53ca05f4758196fa49d92b2fb7b 168 Gene3D G3DSA:1.20.1260.10 5 160 2.7E-52 T 09-03-2017 IPR012347 Ferritin-related RG43_RS04755 3f5ec8c6f27cb65e549aacbdad9b9da4 401 Pfam PF03616 Sodium/glutamate symporter 2 366 6.1E-164 T 09-03-2017 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 RG43_RS04755 3f5ec8c6f27cb65e549aacbdad9b9da4 401 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 3 396 1.6E-155 T 09-03-2017 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 RG43_RS00650 2fb86a03415b32d70f7498c367249289 427 Gene3D G3DSA:2.70.70.10 288 426 5.1E-36 T 09-03-2017 RG43_RS00650 2fb86a03415b32d70f7498c367249289 427 Pfam PF01551 Peptidase family M23 328 421 5.6E-26 T 09-03-2017 IPR016047 Peptidase M23 RG43_RS00650 2fb86a03415b32d70f7498c367249289 427 SUPERFAMILY SSF51261 227 425 3.5E-47 T 09-03-2017 IPR011055 Duplicated hybrid motif RG43_RS27845 440907af77573c3076a80f57c3157477 83 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 41 83 4.1E-12 T 09-03-2017 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RG43_RS27845 440907af77573c3076a80f57c3157477 83 Gene3D G3DSA:3.40.720.10 4 36 3.5E-4 T 09-03-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RG43_RS27845 440907af77573c3076a80f57c3157477 83 Pfam PF01676 Metalloenzyme superfamily 2 57 6.7E-6 T 09-03-2017 IPR006124 Metalloenzyme GO:0003824|GO:0046872 RG43_RS27845 440907af77573c3076a80f57c3157477 83 SUPERFAMILY SSF64158 35 83 1.07E-14 T 09-03-2017 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RG43_RS27845 440907af77573c3076a80f57c3157477 83 Gene3D G3DSA:3.40.1450.10 37 83 6.2E-16 T 09-03-2017 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RG43_RS12245 dc99204c6e5810e9f78af9d17059f883 138 Pfam PF02657 Fe-S metabolism associated domain 12 132 7.0E-44 T 09-03-2017 IPR003808 Fe-S metabolism associated domain, SufE-like RG43_RS12245 dc99204c6e5810e9f78af9d17059f883 138 Gene3D G3DSA:3.90.1010.10 1 137 6.6E-53 T 09-03-2017 RG43_RS12245 dc99204c6e5810e9f78af9d17059f883 138 SUPERFAMILY SSF82649 2 135 3.66E-45 T 09-03-2017 RG43_RS12245 dc99204c6e5810e9f78af9d17059f883 138 Hamap MF_01832 Cysteine desulfuration protein SufE [sufE]. 1 138 42.864 T 09-03-2017 IPR023939 Cysteine desulfuration protein SufE GO:0006790|GO:0016226 RG43_RS17225 d0f8f73d04bc2e3f5a505d63942747da 382 Hamap MF_00246 Galactokinase [galK]. 25 381 45.96 T 09-03-2017 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 RG43_RS17225 d0f8f73d04bc2e3f5a505d63942747da 382 Gene3D G3DSA:3.30.70.890 208 380 5.4E-62 T 09-03-2017 IPR013750 GHMP kinase, C-terminal domain RG43_RS17225 d0f8f73d04bc2e3f5a505d63942747da 382 TIGRFAM TIGR00131 gal_kin: galactokinase 5 382 6.2E-176 T 09-03-2017 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 RG43_RS17225 d0f8f73d04bc2e3f5a505d63942747da 382 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 121 132 - T 09-03-2017 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 RG43_RS17225 d0f8f73d04bc2e3f5a505d63942747da 382 Gene3D G3DSA:3.30.230.10 5 207 2.5E-78 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RG43_RS17225 d0f8f73d04bc2e3f5a505d63942747da 382 Pfam PF10509 Galactokinase galactose-binding signature 11 58 1.8E-21 T 09-03-2017 IPR019539 Galactokinase galactose-binding domain KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 RG43_RS17225 d0f8f73d04bc2e3f5a505d63942747da 382 ProSitePatterns PS00106 Galactokinase signature. 27 38 - T 09-03-2017 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 RG43_RS17225 d0f8f73d04bc2e3f5a505d63942747da 382 PRINTS PR00959 Mevalonate kinase family signature 25 49 2.0E-46 T 09-03-2017 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 RG43_RS17225 d0f8f73d04bc2e3f5a505d63942747da 382 PRINTS PR00959 Mevalonate kinase family signature 162 181 2.0E-46 T 09-03-2017 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 RG43_RS17225 d0f8f73d04bc2e3f5a505d63942747da 382 PRINTS PR00959 Mevalonate kinase family signature 328 345 2.0E-46 T 09-03-2017 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 RG43_RS17225 d0f8f73d04bc2e3f5a505d63942747da 382 PRINTS PR00959 Mevalonate kinase family signature 119 141 2.0E-46 T 09-03-2017 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 RG43_RS17225 d0f8f73d04bc2e3f5a505d63942747da 382 SUPERFAMILY SSF55060 205 380 5.12E-52 T 09-03-2017 IPR013750 GHMP kinase, C-terminal domain RG43_RS17225 d0f8f73d04bc2e3f5a505d63942747da 382 SUPERFAMILY SSF54211 3 202 1.44E-63 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold RG43_RS17225 d0f8f73d04bc2e3f5a505d63942747da 382 PIRSF PIRSF000530 1 382 2.0E-122 T 09-03-2017 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 RG43_RS17225 d0f8f73d04bc2e3f5a505d63942747da 382 PRINTS PR00473 Galactokinase signature 263 277 5.0E-30 T 09-03-2017 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 RG43_RS17225 d0f8f73d04bc2e3f5a505d63942747da 382 PRINTS PR00473 Galactokinase signature 27 45 5.0E-30 T 09-03-2017 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 RG43_RS17225 d0f8f73d04bc2e3f5a505d63942747da 382 PRINTS PR00473 Galactokinase signature 92 103 5.0E-30 T 09-03-2017 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 RG43_RS17225 d0f8f73d04bc2e3f5a505d63942747da 382 PRINTS PR00473 Galactokinase signature 112 130 5.0E-30 T 09-03-2017 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 RG43_RS17225 d0f8f73d04bc2e3f5a505d63942747da 382 Pfam PF00288 GHMP kinases N terminal domain 115 181 3.2E-14 T 09-03-2017 IPR006204 GHMP kinase N-terminal domain GO:0005524 RG43_RS17225 d0f8f73d04bc2e3f5a505d63942747da 382 Pfam PF08544 GHMP kinases C terminal 279 361 4.4E-13 T 09-03-2017 IPR013750 GHMP kinase, C-terminal domain RG43_RS00685 bbe6ea2b622d898979a9501bbe03d452 273 Gene3D G3DSA:2.160.10.10 143 252 1.5E-31 T 09-03-2017 RG43_RS00685 bbe6ea2b622d898979a9501bbe03d452 273 SUPERFAMILY SSF51161 5 260 2.63E-68 T 09-03-2017 IPR011004 Trimeric LpxA-like RG43_RS00685 bbe6ea2b622d898979a9501bbe03d452 273 SMART SM00971 9 113 3.2E-65 T 09-03-2017 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 RG43_RS00685 bbe6ea2b622d898979a9501bbe03d452 273 Gene3D G3DSA:1.10.3130.10 7 142 1.3E-52 T 09-03-2017 RG43_RS00685 bbe6ea2b622d898979a9501bbe03d452 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 6.0E-10 T 09-03-2017 IPR001451 Hexapeptide repeat RG43_RS00685 bbe6ea2b622d898979a9501bbe03d452 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 82 242 2.5E-75 T 09-03-2017 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 RG43_RS00685 bbe6ea2b622d898979a9501bbe03d452 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 09-03-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 RG43_RS00685 bbe6ea2b622d898979a9501bbe03d452 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 113 9.1E-40 T 09-03-2017 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 RG43_RS18965 91ce89c8c196f54ebdda1ef42dfb6aee 375 Gene3D G3DSA:3.20.20.105 1 367 9.2E-171 T 09-03-2017 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 RG43_RS18965 91ce89c8c196f54ebdda1ef42dfb6aee 375 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 359 58.719 T 09-03-2017 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 RG43_RS18965 91ce89c8c196f54ebdda1ef42dfb6aee 375 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 369 5.8E-182 T 09-03-2017 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 RG43_RS18965 91ce89c8c196f54ebdda1ef42dfb6aee 375 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 369 1.7E-192 T 09-03-2017 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 RG43_RS18965 91ce89c8c196f54ebdda1ef42dfb6aee 375 Pfam PF01702 Queuine tRNA-ribosyltransferase 126 361 1.2E-93 T 09-03-2017 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 RG43_RS18965 91ce89c8c196f54ebdda1ef42dfb6aee 375 SUPERFAMILY SSF51713 1 364 9.94E-164 T 09-03-2017 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 RG43_RS03520 3eaa9ee8c4233917cfcb22c60ee5cd98 334 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 8 124 7.5E-28 T 09-03-2017 IPR000683 Oxidoreductase, N-terminal GO:0016491 RG43_RS03520 3eaa9ee8c4233917cfcb22c60ee5cd98 334 SUPERFAMILY SSF55347 132 296 4.25E-23 T 09-03-2017 RG43_RS03520 3eaa9ee8c4233917cfcb22c60ee5cd98 334 SUPERFAMILY SSF51735 7 158 1.45E-43 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS03520 3eaa9ee8c4233917cfcb22c60ee5cd98 334 Gene3D G3DSA:3.40.50.720 7 148 6.7E-43 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS03520 3eaa9ee8c4233917cfcb22c60ee5cd98 334 Gene3D G3DSA:3.30.360.10 149 331 1.8E-66 T 09-03-2017 RG43_RS11880 fd225d778bd13cfcddd79fab357a8717 406 SUPERFAMILY SSF53383 13 395 5.38E-127 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS11880 fd225d778bd13cfcddd79fab357a8717 406 Hamap MF_01173 Succinylornithine transaminase [astC]. 1 406 76.935 T 09-03-2017 IPR026330 Succinylornithine transaminase GO:0006527|GO:0006593|GO:0043825 KEGG: 00330+2.6.1.81 RG43_RS11880 fd225d778bd13cfcddd79fab357a8717 406 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 5 401 9.5E-228 T 09-03-2017 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 RG43_RS11880 fd225d778bd13cfcddd79fab357a8717 406 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 220 257 - T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RG43_RS11880 fd225d778bd13cfcddd79fab357a8717 406 Gene3D G3DSA:3.90.1150.10 304 398 1.2E-34 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RG43_RS11880 fd225d778bd13cfcddd79fab357a8717 406 Gene3D G3DSA:3.90.1150.10 8 57 1.2E-34 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RG43_RS11880 fd225d778bd13cfcddd79fab357a8717 406 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 11 398 45.369 T 09-03-2017 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 RG43_RS11880 fd225d778bd13cfcddd79fab357a8717 406 Gene3D G3DSA:3.40.640.10 58 300 1.9E-92 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS11880 fd225d778bd13cfcddd79fab357a8717 406 Pfam PF00202 Aminotransferase class-III 22 394 2.7E-123 T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RG43_RS11880 fd225d778bd13cfcddd79fab357a8717 406 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 13 397 3.2E-168 T 09-03-2017 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 RG43_RS09065 d9ce11c6f097a5098952debc5adba82c 506 SUPERFAMILY SSF52540 12 236 7.84E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS09065 d9ce11c6f097a5098952debc5adba82c 506 SMART SM00382 38 225 2.0E-7 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS09065 d9ce11c6f097a5098952debc5adba82c 506 SMART SM00382 288 483 0.7 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS09065 d9ce11c6f097a5098952debc5adba82c 506 SUPERFAMILY SSF52540 253 487 2.09E-40 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS09065 d9ce11c6f097a5098952debc5adba82c 506 Gene3D G3DSA:3.40.50.300 11 241 1.5E-61 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS09065 d9ce11c6f097a5098952debc5adba82c 506 Gene3D G3DSA:3.40.50.300 263 497 8.1E-44 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS09065 d9ce11c6f097a5098952debc5adba82c 506 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS09065 d9ce11c6f097a5098952debc5adba82c 506 Pfam PF00005 ABC transporter 280 434 1.9E-17 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS09065 d9ce11c6f097a5098952debc5adba82c 506 Pfam PF00005 ABC transporter 29 178 2.3E-29 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS16295 aae8cb6468b1ea81de275d5cf7823337 243 SMART SM00062 22 243 1.6E-85 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RG43_RS16295 aae8cb6468b1ea81de275d5cf7823337 243 Gene3D G3DSA:3.40.190.10 110 201 4.3E-28 T 09-03-2017 RG43_RS16295 aae8cb6468b1ea81de275d5cf7823337 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 242 9.9E-67 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RG43_RS16295 aae8cb6468b1ea81de275d5cf7823337 243 Gene3D G3DSA:3.40.190.10 20 108 9.3E-45 T 09-03-2017 RG43_RS16295 aae8cb6468b1ea81de275d5cf7823337 243 Gene3D G3DSA:3.40.190.10 203 242 9.3E-45 T 09-03-2017 RG43_RS16295 aae8cb6468b1ea81de275d5cf7823337 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 2 241 1.0E-92 T 09-03-2017 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 RG43_RS16295 aae8cb6468b1ea81de275d5cf7823337 243 SMART SM00079 22 243 3.9E-4 T 09-03-2017 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 RG43_RS16295 aae8cb6468b1ea81de275d5cf7823337 243 SUPERFAMILY SSF53850 1 242 1.87E-71 T 09-03-2017 RG43_RS16295 aae8cb6468b1ea81de275d5cf7823337 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 09-03-2017 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 RG43_RS00700 88b43cd3dc29838dacf51888e31e4d8e 258 SMART SM00345 12 71 1.7E-25 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS00700 88b43cd3dc29838dacf51888e31e4d8e 258 Pfam PF07729 FCD domain 100 222 1.5E-22 T 09-03-2017 IPR011711 GntR, C-terminal RG43_RS00700 88b43cd3dc29838dacf51888e31e4d8e 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 1.4E-10 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS00700 88b43cd3dc29838dacf51888e31e4d8e 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 1.4E-10 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS00700 88b43cd3dc29838dacf51888e31e4d8e 258 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 71 5.0E-22 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS00700 88b43cd3dc29838dacf51888e31e4d8e 258 Gene3D G3DSA:1.10.10.10 6 72 8.2E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS00700 88b43cd3dc29838dacf51888e31e4d8e 258 SUPERFAMILY SSF48008 98 230 2.88E-26 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal RG43_RS00700 88b43cd3dc29838dacf51888e31e4d8e 258 Gene3D G3DSA:1.20.120.530 96 231 1.2E-24 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal RG43_RS00700 88b43cd3dc29838dacf51888e31e4d8e 258 SUPERFAMILY SSF46785 6 75 2.02E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS00700 88b43cd3dc29838dacf51888e31e4d8e 258 SMART SM00895 100 224 4.2E-20 T 09-03-2017 IPR011711 GntR, C-terminal RG43_RS24640 ac9f538e0382c57130d72c7835d5d06d 421 Gene3D G3DSA:1.20.1250.20 212 415 9.3E-17 T 09-03-2017 RG43_RS24640 ac9f538e0382c57130d72c7835d5d06d 421 SUPERFAMILY SSF103473 3 414 2.75E-46 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS24640 ac9f538e0382c57130d72c7835d5d06d 421 Pfam PF07690 Major Facilitator Superfamily 32 365 4.6E-23 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS24640 ac9f538e0382c57130d72c7835d5d06d 421 Gene3D G3DSA:1.20.1250.20 12 202 1.0E-19 T 09-03-2017 RG43_RS06495 4550189a9223f2c0024f6179a19054cc 400 SUPERFAMILY SSF54631 276 394 9.51E-12 T 09-03-2017 RG43_RS06495 4550189a9223f2c0024f6179a19054cc 400 Pfam PF00005 ABC transporter 45 192 2.1E-34 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS06495 4550189a9223f2c0024f6179a19054cc 400 Gene3D G3DSA:3.40.50.300 41 264 1.6E-80 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS06495 4550189a9223f2c0024f6179a19054cc 400 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 36 394 1.5E-192 T 09-03-2017 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 RG43_RS06495 4550189a9223f2c0024f6179a19054cc 400 Pfam PF00571 CBS domain 347 393 1.3E-5 T 09-03-2017 IPR000644 CBS domain RG43_RS06495 4550189a9223f2c0024f6179a19054cc 400 SMART SM00382 53 242 9.1E-19 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS06495 4550189a9223f2c0024f6179a19054cc 400 SUPERFAMILY SSF52540 43 270 3.39E-77 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS06495 4550189a9223f2c0024f6179a19054cc 400 Gene3D G3DSA:3.10.580.10 272 395 8.2E-22 T 09-03-2017 RG43_RS06495 4550189a9223f2c0024f6179a19054cc 400 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS19815 c07f4144b198401c1e55711e38d64674 247 SMART SM00635 160 240 6.0E-18 T 09-03-2017 IPR003343 Bacterial Ig-like, group 2 RG43_RS19815 c07f4144b198401c1e55711e38d64674 247 SUPERFAMILY SSF49373 157 238 1.1E-5 T 09-03-2017 IPR008964 Invasin/intimin cell-adhesion fragments RG43_RS19815 c07f4144b198401c1e55711e38d64674 247 Gene3D G3DSA:2.60.40.1080 159 241 4.0E-8 T 09-03-2017 RG43_RS19815 c07f4144b198401c1e55711e38d64674 247 Pfam PF16461 Lambda phage tail tube protein, TTP 2 154 3.5E-78 T 09-03-2017 IPR032494 Lambda phage tail tube protein RG43_RS19815 c07f4144b198401c1e55711e38d64674 247 Pfam PF02368 Bacterial Ig-like domain (group 2) 161 237 6.0E-11 T 09-03-2017 IPR003343 Bacterial Ig-like, group 2 RG43_RS11120 8dda9aba8baacb1f66dec4dd14e54abd 809 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 493 510 - T 09-03-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 RG43_RS11120 8dda9aba8baacb1f66dec4dd14e54abd 809 Gene3D G3DSA:3.40.50.740 393 494 1.7E-42 T 09-03-2017 RG43_RS11120 8dda9aba8baacb1f66dec4dd14e54abd 809 Gene3D G3DSA:3.40.50.740 77 178 1.7E-42 T 09-03-2017 RG43_RS11120 8dda9aba8baacb1f66dec4dd14e54abd 809 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 709 736 - T 09-03-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 RG43_RS11120 8dda9aba8baacb1f66dec4dd14e54abd 809 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 31 2.1E-6 T 09-03-2017 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RG43_RS11120 8dda9aba8baacb1f66dec4dd14e54abd 809 Gene3D G3DSA:2.40.40.20 646 801 3.3E-54 T 09-03-2017 RG43_RS11120 8dda9aba8baacb1f66dec4dd14e54abd 809 SUPERFAMILY SSF53706 44 657 3.14E-160 T 09-03-2017 RG43_RS11120 8dda9aba8baacb1f66dec4dd14e54abd 809 SUPERFAMILY SSF50692 663 806 2.49E-38 T 09-03-2017 IPR009010 Aspartate decarboxylase-like domain RG43_RS11120 8dda9aba8baacb1f66dec4dd14e54abd 809 Gene3D G3DSA:3.90.55.10 495 601 4.7E-37 T 09-03-2017 RG43_RS11120 8dda9aba8baacb1f66dec4dd14e54abd 809 Pfam PF01568 Molydopterin dinucleotide binding domain 670 779 8.6E-24 T 09-03-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RG43_RS11120 8dda9aba8baacb1f66dec4dd14e54abd 809 Pfam PF00384 Molybdopterin oxidoreductase 84 550 6.1E-102 T 09-03-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS11120 8dda9aba8baacb1f66dec4dd14e54abd 809 Gene3D G3DSA:3.40.228.10 182 392 4.4E-60 T 09-03-2017 RG43_RS11120 8dda9aba8baacb1f66dec4dd14e54abd 809 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 41 808 0.0 T 09-03-2017 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 RG43_RS01170 b1e85b1488761f2c103205a2adc40634 662 Pfam PF17154 Gammaproteobacterial periplasmic sensor domain 36 155 1.1E-50 T 09-03-2017 IPR033419 Gammaproteobacterial periplasmic sensor domain GAPES3 RG43_RS01170 b1e85b1488761f2c103205a2adc40634 662 Gene3D G3DSA:3.30.70.270 247 404 5.6E-17 T 09-03-2017 RG43_RS01170 b1e85b1488761f2c103205a2adc40634 662 Pfam PF00563 EAL domain 415 648 1.4E-60 T 09-03-2017 IPR001633 EAL domain RG43_RS01170 b1e85b1488761f2c103205a2adc40634 662 SUPERFAMILY SSF55073 248 400 1.65E-17 T 09-03-2017 IPR029787 Nucleotide cyclase RG43_RS01170 b1e85b1488761f2c103205a2adc40634 662 SUPERFAMILY SSF141868 413 658 3.53E-73 T 09-03-2017 IPR001633 EAL domain RG43_RS01170 b1e85b1488761f2c103205a2adc40634 662 SMART SM00267 231 398 1.5E-40 T 09-03-2017 IPR000160 GGDEF domain RG43_RS01170 b1e85b1488761f2c103205a2adc40634 662 Gene3D G3DSA:3.20.20.450 413 657 7.1E-77 T 09-03-2017 IPR001633 EAL domain RG43_RS01170 b1e85b1488761f2c103205a2adc40634 662 SMART SM00052 408 653 4.4E-115 T 09-03-2017 IPR001633 EAL domain RG43_RS01170 b1e85b1488761f2c103205a2adc40634 662 Pfam PF00990 Diguanylate cyclase, GGDEF domain 247 394 2.6E-11 T 09-03-2017 IPR000160 GGDEF domain RG43_RS01170 b1e85b1488761f2c103205a2adc40634 662 Pfam PF00672 HAMP domain 162 232 2.4E-12 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RG43_RS01570 5f9644df1500934489c4163527ab52e7 498 SMART SM00962 294 495 4.7E-125 T 09-03-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 RG43_RS01570 5f9644df1500934489c4163527ab52e7 498 SUPERFAMILY SSF47364 195 274 1.7E-22 T 09-03-2017 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 RG43_RS01570 5f9644df1500934489c4163527ab52e7 498 SUPERFAMILY SSF52540 287 494 1.25E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS01570 5f9644df1500934489c4163527ab52e7 498 SMART SM00963 200 280 3.3E-24 T 09-03-2017 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 RG43_RS01570 5f9644df1500934489c4163527ab52e7 498 Gene3D G3DSA:1.20.120.140 185 276 5.2E-36 T 09-03-2017 RG43_RS01570 5f9644df1500934489c4163527ab52e7 498 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 468 481 - T 09-03-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 RG43_RS01570 5f9644df1500934489c4163527ab52e7 498 Gene3D G3DSA:3.40.50.300 288 494 4.1E-84 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS01570 5f9644df1500934489c4163527ab52e7 498 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 223 495 65.982 T 09-03-2017 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 RG43_RS01570 5f9644df1500934489c4163527ab52e7 498 SMART SM00382 293 484 1.1E-10 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS01570 5f9644df1500934489c4163527ab52e7 498 Pfam PF02881 SRP54-type protein, helical bundle domain 211 276 1.9E-13 T 09-03-2017 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 RG43_RS01570 5f9644df1500934489c4163527ab52e7 498 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 223 494 1.8E-116 T 09-03-2017 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 RG43_RS01570 5f9644df1500934489c4163527ab52e7 498 Pfam PF00448 SRP54-type protein, GTPase domain 294 494 9.4E-80 T 09-03-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 RG43_RS13090 c70790b8208f2523c40652c4ec0f02ce 790 Gene3D G3DSA:2.40.170.20 217 790 3.1E-33 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RG43_RS13090 c70790b8208f2523c40652c4ec0f02ce 790 Gene3D G3DSA:2.40.170.20 166 175 3.1E-33 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RG43_RS13090 c70790b8208f2523c40652c4ec0f02ce 790 SUPERFAMILY SSF56935 30 187 4.58E-52 T 09-03-2017 RG43_RS13090 c70790b8208f2523c40652c4ec0f02ce 790 SUPERFAMILY SSF56935 217 790 4.58E-52 T 09-03-2017 RG43_RS13090 c70790b8208f2523c40652c4ec0f02ce 790 Gene3D G3DSA:2.170.130.10 47 165 1.3E-5 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RG43_RS13090 c70790b8208f2523c40652c4ec0f02ce 790 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 165 1.4E-8 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RG43_RS18725 d0c769862885b8c349211f1a241cc92c 190 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 46 150 7.7E-42 T 09-03-2017 RG43_RS14930 95104aecf69580d3b90acc94bd0de3a5 303 Gene3D G3DSA:3.30.420.40 1 132 1.5E-42 T 09-03-2017 RG43_RS14930 95104aecf69580d3b90acc94bd0de3a5 303 Hamap MF_01271 N-acetyl-D-glucosamine kinase [nagK]. 1 303 66.785 T 09-03-2017 IPR023505 N-acetyl-D-glucosamine kinase GO:0045127 KEGG: 00520+2.7.1.59|MetaCyc: PWY-6517|MetaCyc: PWY-6906 RG43_RS14930 95104aecf69580d3b90acc94bd0de3a5 303 SUPERFAMILY SSF53067 1 300 3.85E-61 T 09-03-2017 RG43_RS14930 95104aecf69580d3b90acc94bd0de3a5 303 Gene3D G3DSA:3.30.420.40 133 278 8.6E-49 T 09-03-2017 RG43_RS14930 95104aecf69580d3b90acc94bd0de3a5 303 ProSitePatterns PS01125 ROK family signature. 130 157 - T 09-03-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 RG43_RS14930 95104aecf69580d3b90acc94bd0de3a5 303 Pfam PF00480 ROK family 2 300 2.1E-69 T 09-03-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 RG43_RS09795 e1b90d9cdd851d1aafe09ff98143aef9 452 PIRSF PIRSF006060 2 445 1.8E-71 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RG43_RS09795 e1b90d9cdd851d1aafe09ff98143aef9 452 Pfam PF13520 Amino acid permease 57 409 8.8E-35 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RG43_RS24355 09c3df572bbcb0036915e2694d09b2fc 344 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 52 332 9.4E-75 T 09-03-2017 IPR006430 Phage portal protein PBSX family RG43_RS24355 09c3df572bbcb0036915e2694d09b2fc 344 Pfam PF04860 Phage portal protein 89 322 4.8E-12 T 09-03-2017 IPR006944 Bacteriophage/Gene transfer agent portal protein RG43_RS24355 09c3df572bbcb0036915e2694d09b2fc 344 PIRSF PIRSF018494 1 344 4.1E-155 T 09-03-2017 IPR030935 Phage portal protein PBSX family, Proteobacteria RG43_RS02755 ef080a313b3e9867e6bbe53b4495ced0 1266 Pfam PF13116 Protein of unknown function 505 789 3.5E-97 T 09-03-2017 IPR025263 Domain of unknown function DUF3971 RG43_RS02755 ef080a313b3e9867e6bbe53b4495ced0 1266 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 2 1262 0.0 T 09-03-2017 IPR011836 Conserved hypothetical protein CHP02099 RG43_RS02755 ef080a313b3e9867e6bbe53b4495ced0 1266 Pfam PF13502 AsmA-like C-terminal region 1009 1252 1.6E-68 T 09-03-2017 IPR032712 AsmA-like, C-terminal RG43_RS22800 8a819b1319a310a32369306016a392b8 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 09-03-2017 IPR013852 Translation elongation factor P/YeiP, conserved site RG43_RS22800 8a819b1319a310a32369306016a392b8 188 Gene3D G3DSA:2.40.50.140 66 129 4.5E-26 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS22800 8a819b1319a310a32369306016a392b8 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 72 123 9.7E-23 T 09-03-2017 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 RG43_RS22800 8a819b1319a310a32369306016a392b8 188 SUPERFAMILY SSF50249 70 128 2.31E-18 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS22800 8a819b1319a310a32369306016a392b8 188 PIRSF PIRSF005901 2 188 9.6E-67 T 09-03-2017 IPR020599 Translation elongation factor P/YeiP RG43_RS22800 8a819b1319a310a32369306016a392b8 188 SUPERFAMILY SSF50249 130 187 1.2E-18 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS22800 8a819b1319a310a32369306016a392b8 188 Gene3D G3DSA:2.30.30.30 2 64 6.2E-26 T 09-03-2017 IPR014722 Ribosomal protein L2 domain 2 RG43_RS22800 8a819b1319a310a32369306016a392b8 188 TIGRFAM TIGR00038 efp: translation elongation factor P 6 187 2.5E-76 T 09-03-2017 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 RG43_RS22800 8a819b1319a310a32369306016a392b8 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 4.2E-26 T 09-03-2017 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 RG43_RS22800 8a819b1319a310a32369306016a392b8 188 SUPERFAMILY SSF50104 3 63 2.35E-17 T 09-03-2017 IPR008991 Translation protein SH3-like domain RG43_RS22800 8a819b1319a310a32369306016a392b8 188 Gene3D G3DSA:2.40.50.140 130 187 3.6E-29 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS22800 8a819b1319a310a32369306016a392b8 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 7 61 1.6E-23 T 09-03-2017 IPR013185 Translation elongation factor, KOW-like RG43_RS22800 8a819b1319a310a32369306016a392b8 188 SMART SM00841 131 186 6.9E-33 T 09-03-2017 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 RG43_RS22800 8a819b1319a310a32369306016a392b8 188 SMART SM01185 69 123 1.6E-26 T 09-03-2017 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 RG43_RS22800 8a819b1319a310a32369306016a392b8 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 50.871 T 09-03-2017 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 RG43_RS11035 e3257a074ded8140647994f4c5b67d81 308 Gene3D G3DSA:3.30.1330.60 151 264 2.7E-15 T 09-03-2017 IPR006665 OmpA-like domain RG43_RS11035 e3257a074ded8140647994f4c5b67d81 308 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 13 66 1.4E-19 T 09-03-2017 IPR025713 Motility protein B, N-terminal domain RG43_RS11035 e3257a074ded8140647994f4c5b67d81 308 Pfam PF00691 OmpA family 160 257 6.4E-12 T 09-03-2017 IPR006665 OmpA-like domain RG43_RS11035 e3257a074ded8140647994f4c5b67d81 308 SUPERFAMILY SSF103088 156 264 4.45E-18 T 09-03-2017 IPR006665 OmpA-like domain RG43_RS21390 86c88c69465b16548b2c256009e82f38 131 Pfam PF07180 Protein of unknown function (DUF1401) 8 61 4.8E-6 T 09-03-2017 IPR020357 Transcription regulator CaiF/GrlA GO:0006351 RG43_RS21390 86c88c69465b16548b2c256009e82f38 131 ProDom PD081346 TRANSCRIPTIONAL CAIF OPERON REGULATOR CAI ACTIVATOR TRANSCRIPTION ACTIVATORY FIX REGULATION 1 131 9.0E-73 T 09-03-2017 IPR020357 Transcription regulator CaiF/GrlA GO:0006351 RG43_RS14980 a2aeb475fb4217ebed98893c05dbad80 434 SUPERFAMILY SSF51905 6 345 4.38E-34 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS14980 a2aeb475fb4217ebed98893c05dbad80 434 Gene3D G3DSA:3.50.50.60 6 183 4.0E-25 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS14980 a2aeb475fb4217ebed98893c05dbad80 434 Gene3D G3DSA:3.50.50.60 184 353 8.4E-31 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS14980 a2aeb475fb4217ebed98893c05dbad80 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 115 133 1.6E-15 T 09-03-2017 RG43_RS14980 a2aeb475fb4217ebed98893c05dbad80 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 1.6E-15 T 09-03-2017 RG43_RS14980 a2aeb475fb4217ebed98893c05dbad80 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 295 317 1.6E-15 T 09-03-2017 RG43_RS14980 a2aeb475fb4217ebed98893c05dbad80 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.6E-15 T 09-03-2017 RG43_RS14980 a2aeb475fb4217ebed98893c05dbad80 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 197 2.4E-8 T 09-03-2017 RG43_RS14980 a2aeb475fb4217ebed98893c05dbad80 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 317 2.4E-8 T 09-03-2017 RG43_RS14980 a2aeb475fb4217ebed98893c05dbad80 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.4E-8 T 09-03-2017 RG43_RS14980 a2aeb475fb4217ebed98893c05dbad80 434 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 338 2.2E-72 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS16845 253cbaf00c54bae190a184ed413a3cfb 1165 Gene3D G3DSA:2.60.40.10 618 707 4.1E-4 T 09-03-2017 IPR013783 Immunoglobulin-like fold RG43_RS16845 253cbaf00c54bae190a184ed413a3cfb 1165 Pfam PF13550 Putative phage tail protein 330 497 2.5E-40 T 09-03-2017 IPR032876 Tip attachment protein J RG43_RS16845 253cbaf00c54bae190a184ed413a3cfb 1165 Pfam PF09327 Domain of unknown function (DUF1983) 873 953 1.8E-22 T 09-03-2017 IPR015406 Domain of unknown function DUF1983 RG43_RS16845 253cbaf00c54bae190a184ed413a3cfb 1165 Pfam PF12421 Fibronectin type III protein 977 1127 2.4E-33 T 09-03-2017 IPR021034 Domain of unknown function, DUF3672 RG43_RS16845 253cbaf00c54bae190a184ed413a3cfb 1165 SUPERFAMILY SSF49265 618 713 3.02E-5 T 09-03-2017 IPR003961 Fibronectin type III GO:0005515 RG43_RS25425 4a322e9c133bccec0d2cf7d3cec1e706 629 SUPERFAMILY SSF51905 97 261 2.07E-52 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS25425 4a322e9c133bccec0d2cf7d3cec1e706 629 SUPERFAMILY SSF51905 7 66 2.07E-52 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS25425 4a322e9c133bccec0d2cf7d3cec1e706 629 Pfam PF01134 Glucose inhibited division protein A 8 398 8.0E-171 T 09-03-2017 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 RG43_RS25425 4a322e9c133bccec0d2cf7d3cec1e706 629 Pfam PF13932 GidA associated domain 403 616 2.6E-73 T 09-03-2017 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 RG43_RS25425 4a322e9c133bccec0d2cf7d3cec1e706 629 Gene3D G3DSA:3.50.50.60 7 233 3.1E-56 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS25425 4a322e9c133bccec0d2cf7d3cec1e706 629 SMART SM01228 546 617 9.2E-45 T 09-03-2017 RG43_RS25425 4a322e9c133bccec0d2cf7d3cec1e706 629 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 09-03-2017 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 RG43_RS25425 4a322e9c133bccec0d2cf7d3cec1e706 629 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 0.0 T 09-03-2017 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 RG43_RS25425 4a322e9c133bccec0d2cf7d3cec1e706 629 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 43.099 T 09-03-2017 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 RG43_RS25425 4a322e9c133bccec0d2cf7d3cec1e706 629 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 09-03-2017 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 RG43_RS26510 53304af597cebd1094bb72b4f75bb0f1 752 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 5 738 0.0 T 09-03-2017 RG43_RS26510 53304af597cebd1094bb72b4f75bb0f1 752 Gene3D G3DSA:3.30.1360.40 235 328 1.2E-24 T 09-03-2017 IPR024946 Arginine repressor C-terminal-like domain RG43_RS26510 53304af597cebd1094bb72b4f75bb0f1 752 SUPERFAMILY SSF101904 494 736 1.26E-50 T 09-03-2017 RG43_RS26510 53304af597cebd1094bb72b4f75bb0f1 752 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 641 675 2.8E-8 T 09-03-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RG43_RS26510 53304af597cebd1094bb72b4f75bb0f1 752 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 593 630 5.3E-4 T 09-03-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RG43_RS26510 53304af597cebd1094bb72b4f75bb0f1 752 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 1 738 34.354 T 09-03-2017 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RG43_RS26510 53304af597cebd1094bb72b4f75bb0f1 752 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 29 465 1.5E-134 T 09-03-2017 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS26510 53304af597cebd1094bb72b4f75bb0f1 752 Gene3D G3DSA:3.90.199.10 27 234 1.3E-105 T 09-03-2017 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 RG43_RS26510 53304af597cebd1094bb72b4f75bb0f1 752 Gene3D G3DSA:3.90.199.10 330 395 1.3E-105 T 09-03-2017 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 RG43_RS26510 53304af597cebd1094bb72b4f75bb0f1 752 Gene3D G3DSA:2.120.10.90 493 726 3.0E-27 T 09-03-2017 RG43_RS26510 53304af597cebd1094bb72b4f75bb0f1 752 SUPERFAMILY SSF56719 28 479 5.36E-154 T 09-03-2017 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 RG43_RS26510 53304af597cebd1094bb72b4f75bb0f1 752 SMART SM00434 8 458 1.1E-240 T 09-03-2017 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS04135 53304af597cebd1094bb72b4f75bb0f1 752 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 5 738 0.0 T 09-03-2017 RG43_RS04135 53304af597cebd1094bb72b4f75bb0f1 752 Gene3D G3DSA:3.30.1360.40 235 328 1.2E-24 T 09-03-2017 IPR024946 Arginine repressor C-terminal-like domain RG43_RS04135 53304af597cebd1094bb72b4f75bb0f1 752 SUPERFAMILY SSF101904 494 736 1.26E-50 T 09-03-2017 RG43_RS04135 53304af597cebd1094bb72b4f75bb0f1 752 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 641 675 2.8E-8 T 09-03-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RG43_RS04135 53304af597cebd1094bb72b4f75bb0f1 752 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 593 630 5.3E-4 T 09-03-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RG43_RS04135 53304af597cebd1094bb72b4f75bb0f1 752 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 1 738 34.354 T 09-03-2017 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RG43_RS04135 53304af597cebd1094bb72b4f75bb0f1 752 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 29 465 1.5E-134 T 09-03-2017 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS04135 53304af597cebd1094bb72b4f75bb0f1 752 Gene3D G3DSA:3.90.199.10 27 234 1.3E-105 T 09-03-2017 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 RG43_RS04135 53304af597cebd1094bb72b4f75bb0f1 752 Gene3D G3DSA:3.90.199.10 330 395 1.3E-105 T 09-03-2017 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 RG43_RS04135 53304af597cebd1094bb72b4f75bb0f1 752 Gene3D G3DSA:2.120.10.90 493 726 3.0E-27 T 09-03-2017 RG43_RS04135 53304af597cebd1094bb72b4f75bb0f1 752 SUPERFAMILY SSF56719 28 479 5.36E-154 T 09-03-2017 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 RG43_RS04135 53304af597cebd1094bb72b4f75bb0f1 752 SMART SM00434 8 458 1.1E-240 T 09-03-2017 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RG43_RS26260 d934ed45b581db52707f843f02dee8a9 273 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 5 272 18.781 T 09-03-2017 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 RG43_RS26260 d934ed45b581db52707f843f02dee8a9 273 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 10 265 4.4E-110 T 09-03-2017 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 RG43_RS26260 d934ed45b581db52707f843f02dee8a9 273 Pfam PF02673 Bacitracin resistance protein BacA 10 266 2.9E-83 T 09-03-2017 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 RG43_RS03885 d934ed45b581db52707f843f02dee8a9 273 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 5 272 18.781 T 09-03-2017 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 RG43_RS03885 d934ed45b581db52707f843f02dee8a9 273 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 10 265 4.4E-110 T 09-03-2017 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 RG43_RS03885 d934ed45b581db52707f843f02dee8a9 273 Pfam PF02673 Bacitracin resistance protein BacA 10 266 2.9E-83 T 09-03-2017 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 RG43_RS06960 d48af2e11ab974ee21a3a053ea2c87cf 475 SMART SM00388 249 317 3.5E-18 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS06960 d48af2e11ab974ee21a3a053ea2c87cf 475 SMART SM00387 360 472 2.5E-25 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS06960 d48af2e11ab974ee21a3a053ea2c87cf 475 Gene3D G3DSA:1.10.287.130 241 313 4.9E-16 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS06960 d48af2e11ab974ee21a3a053ea2c87cf 475 Pfam PF00512 His Kinase A (phospho-acceptor) domain 250 316 2.0E-14 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS06960 d48af2e11ab974ee21a3a053ea2c87cf 475 SUPERFAMILY SSF55874 321 469 1.96E-31 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS06960 d48af2e11ab974ee21a3a053ea2c87cf 475 SUPERFAMILY SSF47384 236 316 8.83E-16 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS06960 d48af2e11ab974ee21a3a053ea2c87cf 475 Gene3D G3DSA:3.30.565.10 319 472 8.6E-33 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS06960 d48af2e11ab974ee21a3a053ea2c87cf 475 Pfam PF00672 HAMP domain 176 243 6.8E-8 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RG43_RS06960 d48af2e11ab974ee21a3a053ea2c87cf 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 425 3.8E-11 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS06960 d48af2e11ab974ee21a3a053ea2c87cf 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 450 3.8E-11 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS06960 d48af2e11ab974ee21a3a053ea2c87cf 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 469 3.8E-11 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS06960 d48af2e11ab974ee21a3a053ea2c87cf 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 411 3.8E-11 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS06960 d48af2e11ab974ee21a3a053ea2c87cf 475 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 364 470 1.8E-15 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS13825 fc74a4c82c46bdb715f10f7117efac68 262 Gene3D G3DSA:3.20.20.150 1 260 4.9E-51 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain RG43_RS13825 fc74a4c82c46bdb715f10f7117efac68 262 SUPERFAMILY SSF51658 1 260 5.8E-52 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain RG43_RS13825 fc74a4c82c46bdb715f10f7117efac68 262 Pfam PF01261 Xylose isomerase-like TIM barrel 19 219 7.6E-26 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain RG43_RS25610 c1c007e5cd0f0bdd10897ed8ba9a91b9 471 Gene3D G3DSA:3.40.640.10 63 314 1.6E-87 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS25610 c1c007e5cd0f0bdd10897ed8ba9a91b9 471 Gene3D G3DSA:3.90.1150.10 315 470 1.1E-63 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RG43_RS25610 c1c007e5cd0f0bdd10897ed8ba9a91b9 471 PIRSF PIRSF001386 3 471 5.2E-202 T 09-03-2017 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 RG43_RS25610 c1c007e5cd0f0bdd10897ed8ba9a91b9 471 TIGRFAM TIGR02617 tnaA_trp_ase: tryptophanase 5 471 0.0 T 09-03-2017 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 RG43_RS25610 c1c007e5cd0f0bdd10897ed8ba9a91b9 471 ProSitePatterns PS00853 Beta-eliminating lyases pyridoxal-phosphate attachment site. 260 278 - T 09-03-2017 IPR018176 Tryptophanase, conserved site KEGG: 00380+4.1.99.1 RG43_RS25610 c1c007e5cd0f0bdd10897ed8ba9a91b9 471 Hamap MF_00544 Tryptophanase [tnaA]. 4 471 102.324 T 09-03-2017 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 RG43_RS25610 c1c007e5cd0f0bdd10897ed8ba9a91b9 471 Pfam PF01212 Beta-eliminating lyase 49 437 9.8E-92 T 09-03-2017 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 RG43_RS25610 c1c007e5cd0f0bdd10897ed8ba9a91b9 471 SUPERFAMILY SSF53383 6 471 1.94E-128 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS23150 a5daf4882b3e90dbbe5dbe0350a75a70 296 Gene3D G3DSA:1.10.10.10 20 88 7.9E-11 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS23150 a5daf4882b3e90dbbe5dbe0350a75a70 296 SUPERFAMILY SSF46689 17 89 5.02E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS23150 a5daf4882b3e90dbbe5dbe0350a75a70 296 Pfam PF01418 Helix-turn-helix domain, rpiR family 15 89 3.8E-25 T 09-03-2017 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 RG43_RS23150 a5daf4882b3e90dbbe5dbe0350a75a70 296 Gene3D G3DSA:3.40.50.10490 110 277 6.1E-37 T 09-03-2017 RG43_RS23150 a5daf4882b3e90dbbe5dbe0350a75a70 296 Pfam PF01380 SIS domain 138 266 1.2E-32 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 RG43_RS23150 a5daf4882b3e90dbbe5dbe0350a75a70 296 SUPERFAMILY SSF53697 104 288 1.7E-40 T 09-03-2017 RG43_RS25305 4d8be6677324127dc80b627c16919a74 506 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 400 492 4.0E-30 T 09-03-2017 IPR025158 Mg chelatase-related protein, C-terminal domain RG43_RS25305 4d8be6677324127dc80b627c16919a74 506 Gene3D G3DSA:3.30.230.10 5 166 1.5E-25 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RG43_RS25305 4d8be6677324127dc80b627c16919a74 506 Pfam PF01078 Magnesium chelatase, subunit ChlI 189 386 1.8E-89 T 09-03-2017 IPR000523 Magnesium chelatase ChlI domain RG43_RS25305 4d8be6677324127dc80b627c16919a74 506 SUPERFAMILY SSF52540 188 503 6.54E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25305 4d8be6677324127dc80b627c16919a74 506 SMART SM00382 209 389 3.0E-9 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS25305 4d8be6677324127dc80b627c16919a74 506 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 2.1E-44 T 09-03-2017 RG43_RS25305 4d8be6677324127dc80b627c16919a74 506 Gene3D G3DSA:3.40.50.300 187 384 4.1E-49 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25305 4d8be6677324127dc80b627c16919a74 506 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 492 5.2E-251 T 09-03-2017 IPR004482 Mg chelatase-related protein RG43_RS25305 4d8be6677324127dc80b627c16919a74 506 SUPERFAMILY SSF54211 11 169 8.72E-29 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold RG43_RS19905 171cfe462f17fc9bbd66f27f6c51d1db 329 SMART SM00507 246 295 1.9E-5 T 09-03-2017 IPR003615 HNH nuclease RG43_RS19905 171cfe462f17fc9bbd66f27f6c51d1db 329 Pfam PF06147 Protein of unknown function (DUF968) 129 326 1.1E-88 T 09-03-2017 IPR010373 Protein of unknown function DUF968 RG43_RS18925 1443b816acba3e886d66e048a5825c72 367 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 50 88 - T 09-03-2017 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 RG43_RS18925 1443b816acba3e886d66e048a5825c72 367 PIRSF PIRSF006769 1 367 3.0E-141 T 09-03-2017 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 RG43_RS18925 1443b816acba3e886d66e048a5825c72 367 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 146 364 2.0E-83 T 09-03-2017 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 RG43_RS18925 1443b816acba3e886d66e048a5825c72 367 SUPERFAMILY SSF53597 144 362 5.24E-59 T 09-03-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 RG43_RS18925 1443b816acba3e886d66e048a5825c72 367 Gene3D G3DSA:3.40.140.10 2 128 6.9E-38 T 09-03-2017 RG43_RS18925 1443b816acba3e886d66e048a5825c72 367 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 2 99 8.3E-24 T 09-03-2017 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 RG43_RS18925 1443b816acba3e886d66e048a5825c72 367 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 7 362 7.1E-160 T 09-03-2017 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 RG43_RS18925 1443b816acba3e886d66e048a5825c72 367 Gene3D G3DSA:3.40.430.10 129 363 1.7E-70 T 09-03-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 RG43_RS18925 1443b816acba3e886d66e048a5825c72 367 SUPERFAMILY SSF53927 3 145 2.68E-50 T 09-03-2017 IPR016193 Cytidine deaminase-like GO:0003824 RG43_RS18925 1443b816acba3e886d66e048a5825c72 367 Pfam PF01872 RibD C-terminal domain 147 362 3.8E-64 T 09-03-2017 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 RG43_RS20330 eaf5d8b88862931ff210ab13fa1c2b88 158 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 107 112 - T 09-03-2017 IPR020891 Uncharacterised protein family UPF0758, conserved site RG43_RS20330 eaf5d8b88862931ff210ab13fa1c2b88 158 Pfam PF04002 RadC-like JAB domain 38 157 1.2E-43 T 09-03-2017 IPR025657 RadC-like JAB domain RG43_RS20330 eaf5d8b88862931ff210ab13fa1c2b88 158 SUPERFAMILY SSF102712 83 124 7.06E-5 T 09-03-2017 RG43_RS20330 eaf5d8b88862931ff210ab13fa1c2b88 158 Gene3D G3DSA:3.40.140.10 36 158 1.9E-50 T 09-03-2017 RG43_RS20330 eaf5d8b88862931ff210ab13fa1c2b88 158 TIGRFAM TIGR00608 radc: DNA repair protein RadC 36 158 2.7E-44 T 09-03-2017 IPR001405 RadC protein RG43_RS05630 fc02a2496dd1fd928049756f8259cb38 274 Gene3D G3DSA:1.10.1790.10 170 267 3.5E-13 T 09-03-2017 IPR011608 PRD domain GO:0006355 RG43_RS05630 fc02a2496dd1fd928049756f8259cb38 274 Gene3D G3DSA:1.10.1790.10 63 163 1.0E-25 T 09-03-2017 IPR011608 PRD domain GO:0006355 RG43_RS05630 fc02a2496dd1fd928049756f8259cb38 274 SUPERFAMILY SSF63520 169 267 4.84E-11 T 09-03-2017 IPR011608 PRD domain GO:0006355 RG43_RS05630 fc02a2496dd1fd928049756f8259cb38 274 Pfam PF00874 PRD domain 73 160 1.2E-22 T 09-03-2017 IPR011608 PRD domain GO:0006355 RG43_RS05630 fc02a2496dd1fd928049756f8259cb38 274 SUPERFAMILY SSF63520 55 164 8.89E-27 T 09-03-2017 IPR011608 PRD domain GO:0006355 RG43_RS05630 fc02a2496dd1fd928049756f8259cb38 274 Pfam PF03123 CAT RNA binding domain 1 55 1.7E-14 T 09-03-2017 IPR004341 CAT RNA-binding domain GO:0003723 RG43_RS05630 fc02a2496dd1fd928049756f8259cb38 274 Gene3D G3DSA:2.30.24.10 1 53 3.8E-17 T 09-03-2017 IPR004341 CAT RNA-binding domain GO:0003723 RG43_RS05630 fc02a2496dd1fd928049756f8259cb38 274 SUPERFAMILY SSF50151 1 53 1.44E-13 T 09-03-2017 IPR004341 CAT RNA-binding domain GO:0003723 RG43_RS05630 fc02a2496dd1fd928049756f8259cb38 274 SMART SM01061 1 58 5.0E-19 T 09-03-2017 IPR004341 CAT RNA-binding domain GO:0003723 RG43_RS06385 ff9f96d7f45619daca23a25a01e0c64d 353 Pfam PF00154 recA bacterial DNA recombination protein 9 270 1.9E-142 T 09-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RG43_RS06385 ff9f96d7f45619daca23a25a01e0c64d 353 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 6 326 2.0E-173 T 09-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RG43_RS06385 ff9f96d7f45619daca23a25a01e0c64d 353 Gene3D G3DSA:3.40.50.300 28 269 2.0E-85 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS06385 ff9f96d7f45619daca23a25a01e0c64d 353 SMART SM00382 59 230 4.5E-9 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS06385 ff9f96d7f45619daca23a25a01e0c64d 353 ProSitePatterns PS00321 recA signature. 215 223 - T 09-03-2017 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 RG43_RS06385 ff9f96d7f45619daca23a25a01e0c64d 353 SUPERFAMILY SSF52540 6 269 6.57E-66 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS06385 ff9f96d7f45619daca23a25a01e0c64d 353 Hamap MF_00268 Protein RecA [recA]. 7 331 50.992 T 09-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RG43_RS06385 ff9f96d7f45619daca23a25a01e0c64d 353 SUPERFAMILY SSF54752 272 327 4.58E-21 T 09-03-2017 IPR023400 DNA recombination and repair protein RecA, C-terminal RG43_RS06385 ff9f96d7f45619daca23a25a01e0c64d 353 Gene3D G3DSA:3.30.250.10 272 328 5.4E-28 T 09-03-2017 IPR023400 DNA recombination and repair protein RecA, C-terminal RG43_RS06385 ff9f96d7f45619daca23a25a01e0c64d 353 PRINTS PR00142 RecA protein signature 129 158 4.8E-84 T 09-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RG43_RS06385 ff9f96d7f45619daca23a25a01e0c64d 353 PRINTS PR00142 RecA protein signature 212 240 4.8E-84 T 09-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RG43_RS06385 ff9f96d7f45619daca23a25a01e0c64d 353 PRINTS PR00142 RecA protein signature 299 316 4.8E-84 T 09-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RG43_RS06385 ff9f96d7f45619daca23a25a01e0c64d 353 PRINTS PR00142 RecA protein signature 167 196 4.8E-84 T 09-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RG43_RS06385 ff9f96d7f45619daca23a25a01e0c64d 353 PRINTS PR00142 RecA protein signature 245 274 4.8E-84 T 09-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RG43_RS06385 ff9f96d7f45619daca23a25a01e0c64d 353 PRINTS PR00142 RecA protein signature 95 124 4.8E-84 T 09-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RG43_RS03860 ef4147859851b90c482996acbebca885 303 Pfam PF05681 Fumarate hydratase (Fumerase) 16 284 3.0E-79 T 09-03-2017 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 RG43_RS03860 ef4147859851b90c482996acbebca885 303 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 14 287 1.8E-123 T 09-03-2017 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 RG43_RS26235 ef4147859851b90c482996acbebca885 303 Pfam PF05681 Fumarate hydratase (Fumerase) 16 284 3.0E-79 T 09-03-2017 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 RG43_RS26235 ef4147859851b90c482996acbebca885 303 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 14 287 1.8E-123 T 09-03-2017 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 RG43_RS08925 6960719fc94bc6539219411f3fe4b313 328 Gene3D G3DSA:3.40.50.300 5 189 1.1E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS08925 6960719fc94bc6539219411f3fe4b313 328 SUPERFAMILY SSF52540 6 170 5.88E-26 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS08925 6960719fc94bc6539219411f3fe4b313 328 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 171 2.2E-39 T 09-03-2017 IPR003495 CobW/HypB/UreG, nucleotide-binding domain RG43_RS08925 6960719fc94bc6539219411f3fe4b313 328 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 242 321 8.1E-6 T 09-03-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RG43_RS08925 6960719fc94bc6539219411f3fe4b313 328 SMART SM00833 240 323 3.4E-5 T 09-03-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RG43_RS19395 d2d9801d6758561c96197714da95efa3 146 SUPERFAMILY SSF88697 3 144 1.66E-43 T 09-03-2017 IPR015947 PUA-like domain RG43_RS19395 d2d9801d6758561c96197714da95efa3 146 Pfam PF04266 ASCH domain 37 143 6.0E-21 T 09-03-2017 IPR007374 ASCH domain RG43_RS19395 d2d9801d6758561c96197714da95efa3 146 SMART SM01022 27 144 8.0E-33 T 09-03-2017 IPR007374 ASCH domain RG43_RS19395 d2d9801d6758561c96197714da95efa3 146 Gene3D G3DSA:3.10.400.10 7 145 1.6E-45 T 09-03-2017 RG43_RS19395 d2d9801d6758561c96197714da95efa3 146 PIRSF PIRSF021320 4 146 1.1E-40 T 09-03-2017 IPR009326 Protein of unknown function DUF984 RG43_RS12060 045e0e7d5dff1f700ee6232859e26b64 327 SUPERFAMILY SSF55681 92 327 7.96E-82 T 09-03-2017 RG43_RS12060 045e0e7d5dff1f700ee6232859e26b64 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 50.131 T 09-03-2017 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 RG43_RS12060 045e0e7d5dff1f700ee6232859e26b64 327 Gene3D G3DSA:3.30.930.10 9 327 3.0E-135 T 09-03-2017 RG43_RS12060 045e0e7d5dff1f700ee6232859e26b64 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 1.5E-27 T 09-03-2017 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 RG43_RS12060 045e0e7d5dff1f700ee6232859e26b64 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 327 3.6E-119 T 09-03-2017 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 RG43_RS12060 045e0e7d5dff1f700ee6232859e26b64 327 SUPERFAMILY SSF46589 14 99 8.89E-23 T 09-03-2017 IPR010978 tRNA-binding arm GO:0000166 RG43_RS12060 045e0e7d5dff1f700ee6232859e26b64 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 3.5E-107 T 09-03-2017 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 RG43_RS16875 cfd0b4c13fdfd7c788bbb2290102e61f 144 Pfam PF06223 Minor tail protein T 11 111 5.1E-50 T 09-03-2017 IPR009350 Minor tail T RG43_RS16875 cfd0b4c13fdfd7c788bbb2290102e61f 144 TIGRFAM TIGR01715 phage_lam_T: phage tail assembly protein T 5 110 4.9E-51 T 09-03-2017 IPR009350 Minor tail T RG43_RS10540 9910805d40fe87428336e7bedc59b8f3 211 Hamap MF_01207 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ [msrQ]. 1 203 24.432 T 09-03-2017 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 RG43_RS10540 9910805d40fe87428336e7bedc59b8f3 211 Pfam PF01794 Ferric reductase like transmembrane component 48 161 2.2E-14 T 09-03-2017 IPR013130 Ferric reductase transmembrane component-like domain RG43_RS06005 0ab16843f6ce16f95894dc30fb088be0 86 Gene3D G3DSA:3.30.70.20 32 69 5.3E-6 T 09-03-2017 RG43_RS06005 0ab16843f6ce16f95894dc30fb088be0 86 PIRSF PIRSF036548 1 86 2.9E-26 T 09-03-2017 IPR012206 Ferredoxin-like, FixX GO:0005506 RG43_RS06005 0ab16843f6ce16f95894dc30fb088be0 86 SUPERFAMILY SSF54862 32 84 1.2E-8 T 09-03-2017 RG43_RS23995 e8165087c2a2ee4f20917626ba34d787 359 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 10 335 1.4E-89 T 09-03-2017 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 RG43_RS25270 979d5e02334f25923107ce85cd75b549 297 Gene3D G3DSA:3.40.190.10 197 252 1.2E-8 T 09-03-2017 RG43_RS25270 979d5e02334f25923107ce85cd75b549 297 SUPERFAMILY SSF53850 89 295 2.1E-31 T 09-03-2017 RG43_RS25270 979d5e02334f25923107ce85cd75b549 297 SUPERFAMILY SSF46785 2 111 7.12E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS25270 979d5e02334f25923107ce85cd75b549 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.6E-21 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS25270 979d5e02334f25923107ce85cd75b549 297 Gene3D G3DSA:3.40.190.10 82 196 2.8E-23 T 09-03-2017 RG43_RS25270 979d5e02334f25923107ce85cd75b549 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.7E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS25270 979d5e02334f25923107ce85cd75b549 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.7E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS25270 979d5e02334f25923107ce85cd75b549 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.7E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS25270 979d5e02334f25923107ce85cd75b549 297 Pfam PF03466 LysR substrate binding domain 89 293 4.1E-37 T 09-03-2017 IPR005119 LysR, substrate-binding RG43_RS25270 979d5e02334f25923107ce85cd75b549 297 Gene3D G3DSA:1.10.10.10 2 81 3.9E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS18945 fd4997cdec126b74da978b9de81cec71 115 Pfam PF01844 HNH endonuclease 27 75 6.4E-12 T 09-03-2017 IPR002711 HNH endonuclease GO:0003676|GO:0004519 RG43_RS18945 fd4997cdec126b74da978b9de81cec71 115 SMART SM00507 15 70 3.2E-6 T 09-03-2017 IPR003615 HNH nuclease RG43_RS10595 4d53d5cd403a5bf3bcbb9204389815fd 196 Pfam PF00267 Gram-negative porin 27 181 1.7E-57 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RG43_RS10595 4d53d5cd403a5bf3bcbb9204389815fd 196 SUPERFAMILY SSF56935 22 179 3.92E-37 T 09-03-2017 RG43_RS10595 4d53d5cd403a5bf3bcbb9204389815fd 196 Gene3D G3DSA:2.40.160.10 22 182 2.8E-45 T 09-03-2017 IPR023614 Porin domain RG43_RS10595 4d53d5cd403a5bf3bcbb9204389815fd 196 PRINTS PR00183 E.coli/Salmonella-type porin signature 97 119 1.8E-44 T 09-03-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 RG43_RS10595 4d53d5cd403a5bf3bcbb9204389815fd 196 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 1.8E-44 T 09-03-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 RG43_RS10595 4d53d5cd403a5bf3bcbb9204389815fd 196 PRINTS PR00183 E.coli/Salmonella-type porin signature 56 74 1.8E-44 T 09-03-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 RG43_RS10595 4d53d5cd403a5bf3bcbb9204389815fd 196 PRINTS PR00183 E.coli/Salmonella-type porin signature 152 174 1.8E-44 T 09-03-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 RG43_RS14665 3dce19592a44caa98fa40a9febe42961 422 Gene3D G3DSA:3.30.70.270 67 157 4.2E-26 T 09-03-2017 RG43_RS14665 3dce19592a44caa98fa40a9febe42961 422 Gene3D G3DSA:3.30.1490.100 249 354 4.5E-5 T 09-03-2017 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 RG43_RS14665 3dce19592a44caa98fa40a9febe42961 422 Pfam PF11799 impB/mucB/samB family C-terminal domain 243 351 1.0E-10 T 09-03-2017 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 RG43_RS14665 3dce19592a44caa98fa40a9febe42961 422 Pfam PF11798 IMS family HHH motif 172 200 4.3E-6 T 09-03-2017 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 RG43_RS14665 3dce19592a44caa98fa40a9febe42961 422 SUPERFAMILY SSF100879 250 346 2.09E-5 T 09-03-2017 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 RG43_RS14665 3dce19592a44caa98fa40a9febe42961 422 Gene3D G3DSA:1.10.150.20 170 240 9.0E-23 T 09-03-2017 RG43_RS14665 3dce19592a44caa98fa40a9febe42961 422 Pfam PF00817 impB/mucB/samB family 5 150 5.6E-39 T 09-03-2017 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 RG43_RS14665 3dce19592a44caa98fa40a9febe42961 422 SUPERFAMILY SSF56672 1 237 2.13E-72 T 09-03-2017 RG43_RS14665 3dce19592a44caa98fa40a9febe42961 422 Pfam PF13438 Domain of unknown function (DUF4113) 371 421 5.9E-22 T 09-03-2017 IPR025188 Domain of unknown function DUF4113 RG43_RS14045 b7d9b3a05260c79240e03e6dc0fb6f8c 196 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 196 48.928 T 09-03-2017 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 RG43_RS14045 b7d9b3a05260c79240e03e6dc0fb6f8c 196 SUPERFAMILY SSF142695 3 173 1.44E-67 T 09-03-2017 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 RG43_RS14045 b7d9b3a05260c79240e03e6dc0fb6f8c 196 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 5 194 4.5E-96 T 09-03-2017 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 RG43_RS14045 b7d9b3a05260c79240e03e6dc0fb6f8c 196 Pfam PF00925 GTP cyclohydrolase II 4 170 2.3E-69 T 09-03-2017 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 RG43_RS05475 e93d34169a90a7e1b692e24dfeceabde 393 ProSitePatterns PS00099 Thiolases active site. 373 386 - T 09-03-2017 IPR020610 Thiolase, active site GO:0008152|GO:0016747 RG43_RS05475 e93d34169a90a7e1b692e24dfeceabde 393 PIRSF PIRSF000429 1 393 6.5E-130 T 09-03-2017 IPR002155 Thiolase GO:0008152|GO:0016747 RG43_RS05475 e93d34169a90a7e1b692e24dfeceabde 393 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 09-03-2017 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 RG43_RS05475 e93d34169a90a7e1b692e24dfeceabde 393 Pfam PF00108 Thiolase, N-terminal domain 4 261 1.5E-102 T 09-03-2017 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RG43_RS05475 e93d34169a90a7e1b692e24dfeceabde 393 Gene3D G3DSA:3.40.47.10 3 123 4.7E-73 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 RG43_RS05475 e93d34169a90a7e1b692e24dfeceabde 393 Gene3D G3DSA:3.40.47.10 194 275 4.7E-73 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 RG43_RS05475 e93d34169a90a7e1b692e24dfeceabde 393 ProSitePatterns PS00737 Thiolases signature 2. 338 354 - T 09-03-2017 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 RG43_RS05475 e93d34169a90a7e1b692e24dfeceabde 393 Gene3D G3DSA:3.40.47.10 276 391 3.5E-66 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 RG43_RS05475 e93d34169a90a7e1b692e24dfeceabde 393 Gene3D G3DSA:3.40.47.10 142 193 3.5E-66 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 RG43_RS05475 e93d34169a90a7e1b692e24dfeceabde 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 390 1.4E-141 T 09-03-2017 IPR002155 Thiolase GO:0008152|GO:0016747 RG43_RS05475 e93d34169a90a7e1b692e24dfeceabde 393 Pfam PF02803 Thiolase, C-terminal domain 270 391 3.0E-52 T 09-03-2017 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RG43_RS05475 e93d34169a90a7e1b692e24dfeceabde 393 SUPERFAMILY SSF53901 3 269 1.36E-83 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 RG43_RS05475 e93d34169a90a7e1b692e24dfeceabde 393 SUPERFAMILY SSF53901 271 391 1.04E-42 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 RG43_RS00130 8fdd5ae11c5bb13a69a6e1f31ad6076c 285 Gene3D G3DSA:3.30.420.10 108 267 3.8E-34 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS00130 8fdd5ae11c5bb13a69a6e1f31ad6076c 285 Pfam PF00665 Integrase core domain 114 229 7.8E-29 T 09-03-2017 IPR001584 Integrase, catalytic core GO:0015074 RG43_RS00130 8fdd5ae11c5bb13a69a6e1f31ad6076c 285 Pfam PF13276 HTH-like domain 37 90 5.6E-8 T 09-03-2017 IPR025948 HTH-like domain RG43_RS00130 8fdd5ae11c5bb13a69a6e1f31ad6076c 285 SUPERFAMILY SSF53098 107 269 5.18E-38 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS10095 42afa4a741ddc33f47f045646e6cbbb2 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.5E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS10095 42afa4a741ddc33f47f045646e6cbbb2 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.5E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS10095 42afa4a741ddc33f47f045646e6cbbb2 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.5E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS10095 42afa4a741ddc33f47f045646e6cbbb2 305 Gene3D G3DSA:1.10.10.10 1 85 3.2E-29 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS10095 42afa4a741ddc33f47f045646e6cbbb2 305 Gene3D G3DSA:3.40.190.10 191 245 7.5E-12 T 09-03-2017 RG43_RS10095 42afa4a741ddc33f47f045646e6cbbb2 305 SUPERFAMILY SSF53850 89 295 2.9E-30 T 09-03-2017 RG43_RS10095 42afa4a741ddc33f47f045646e6cbbb2 305 Gene3D G3DSA:3.40.190.10 89 190 1.2E-18 T 09-03-2017 RG43_RS10095 42afa4a741ddc33f47f045646e6cbbb2 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 9.9E-22 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS10095 42afa4a741ddc33f47f045646e6cbbb2 305 SUPERFAMILY SSF46785 1 86 5.3E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS10095 42afa4a741ddc33f47f045646e6cbbb2 305 Pfam PF03466 LysR substrate binding domain 87 289 2.3E-32 T 09-03-2017 IPR005119 LysR, substrate-binding RG43_RS04750 54ce825026acc9847f8866e57b6a380c 106 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 1.3E-13 T 09-03-2017 IPR007138 Antibiotic biosynthesis monooxygenase domain RG43_RS04750 54ce825026acc9847f8866e57b6a380c 106 SUPERFAMILY SSF54909 1 100 3.8E-24 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel RG43_RS04750 54ce825026acc9847f8866e57b6a380c 106 Gene3D G3DSA:3.30.70.900 1 100 5.9E-17 T 09-03-2017 RG43_RS09055 de0f1ba889e0aea20a5e1276d807138c 346 SUPERFAMILY SSF47413 1 59 4.74E-19 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS09055 de0f1ba889e0aea20a5e1276d807138c 346 Gene3D G3DSA:1.10.260.40 2 57 1.6E-26 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS09055 de0f1ba889e0aea20a5e1276d807138c 346 SMART SM00354 1 71 5.4E-36 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS09055 de0f1ba889e0aea20a5e1276d807138c 346 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 5.5E-7 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS09055 de0f1ba889e0aea20a5e1276d807138c 346 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 5.5E-7 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS09055 de0f1ba889e0aea20a5e1276d807138c 346 Gene3D G3DSA:3.40.50.2300 167 330 1.8E-48 T 09-03-2017 RG43_RS09055 de0f1ba889e0aea20a5e1276d807138c 346 SUPERFAMILY SSF53822 61 331 4.35E-78 T 09-03-2017 IPR028082 Periplasmic binding protein-like I RG43_RS09055 de0f1ba889e0aea20a5e1276d807138c 346 Pfam PF13377 Periplasmic binding protein-like domain 169 329 4.5E-33 T 09-03-2017 RG43_RS09055 de0f1ba889e0aea20a5e1276d807138c 346 Gene3D G3DSA:3.40.50.2300 58 166 2.8E-48 T 09-03-2017 RG43_RS09055 de0f1ba889e0aea20a5e1276d807138c 346 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.0E-21 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS09055 de0f1ba889e0aea20a5e1276d807138c 346 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 09-03-2017 RG43_RS14935 35103556100460c48dcb469b073ebf14 414 Pfam PF02687 FtsX-like permease family 274 407 4.4E-20 T 09-03-2017 IPR003838 ABC transporter permease protein domain GO:0016020 RG43_RS14935 35103556100460c48dcb469b073ebf14 414 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 5 414 1.7E-236 T 09-03-2017 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0006810|GO:0009276|GO:0016021 RG43_RS14935 35103556100460c48dcb469b073ebf14 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 413 1.9E-166 T 09-03-2017 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 RG43_RS14935 35103556100460c48dcb469b073ebf14 414 Pfam PF12704 MacB-like periplasmic core domain 27 239 2.0E-15 T 09-03-2017 IPR025857 MacB-like periplasmic core domain RG43_RS08495 f30c6a448695800f77f6c414a4695f65 660 Pfam PF00551 Formyl transferase 53 175 6.1E-24 T 09-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RG43_RS08495 f30c6a448695800f77f6c414a4695f65 660 Gene3D G3DSA:3.40.50.720 306 553 1.1E-44 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS08495 f30c6a448695800f77f6c414a4695f65 660 SUPERFAMILY SSF53328 1 202 9.29E-54 T 09-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RG43_RS08495 f30c6a448695800f77f6c414a4695f65 660 Gene3D G3DSA:3.40.50.170 1 199 1.7E-48 T 09-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RG43_RS08495 f30c6a448695800f77f6c414a4695f65 660 Hamap MF_01166 Bifunctional polymyxin resistance protein ArnA [arnA]. 1 660 66.971 T 09-03-2017 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00072+1.1.1.30|KEGG: 00520+2.1.2.13+1.1.1.305|KEGG: 00650+1.1.1.30 RG43_RS08495 f30c6a448695800f77f6c414a4695f65 660 Pfam PF02911 Formyl transferase, C-terminal domain 202 294 4.5E-19 T 09-03-2017 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RG43_RS08495 f30c6a448695800f77f6c414a4695f65 660 Gene3D G3DSA:3.90.25.10 570 641 7.0E-46 T 09-03-2017 RG43_RS08495 f30c6a448695800f77f6c414a4695f65 660 Gene3D G3DSA:3.10.25.10 204 305 5.3E-24 T 09-03-2017 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RG43_RS08495 f30c6a448695800f77f6c414a4695f65 660 SUPERFAMILY SSF50486 204 304 1.11E-24 T 09-03-2017 IPR011034 Formyl transferase, C-terminal-like GO:0003824 RG43_RS08495 f30c6a448695800f77f6c414a4695f65 660 PIRSF PIRSF036506 1 660 0.0 T 09-03-2017 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00072+1.1.1.30|KEGG: 00520+2.1.2.13+1.1.1.305|KEGG: 00650+1.1.1.30 RG43_RS08495 f30c6a448695800f77f6c414a4695f65 660 SUPERFAMILY SSF51735 317 652 3.14E-76 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS08495 f30c6a448695800f77f6c414a4695f65 660 Pfam PF01370 NAD dependent epimerase/dehydratase family 318 566 1.4E-46 T 09-03-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RG43_RS11210 a877fa7b187036f56868174ce8f61012 590 Gene3D G3DSA:3.30.1360.30 276 414 6.9E-48 T 09-03-2017 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 RG43_RS11210 a877fa7b187036f56868174ce8f61012 590 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 586 3.5E-281 T 09-03-2017 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 Reactome: R-HSA-379726 RG43_RS11210 a877fa7b187036f56868174ce8f61012 590 Pfam PF00152 tRNA synthetases class II (D, K and N) 118 558 1.0E-106 T 09-03-2017 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS11210 a877fa7b187036f56868174ce8f61012 590 Pfam PF02938 GAD domain 307 406 8.0E-32 T 09-03-2017 IPR029351 GAD domain Reactome: R-HSA-379726 RG43_RS11210 a877fa7b187036f56868174ce8f61012 590 SUPERFAMILY SSF55261 288 419 4.8E-47 T 09-03-2017 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 RG43_RS11210 a877fa7b187036f56868174ce8f61012 590 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 1 563 37.172 T 09-03-2017 RG43_RS11210 a877fa7b187036f56868174ce8f61012 590 Gene3D G3DSA:2.40.50.140 1 106 6.6E-40 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS11210 a877fa7b187036f56868174ce8f61012 590 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 6.3E-17 T 09-03-2017 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 RG43_RS11210 a877fa7b187036f56868174ce8f61012 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 1.2E-26 T 09-03-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS11210 a877fa7b187036f56868174ce8f61012 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 1.2E-26 T 09-03-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS11210 a877fa7b187036f56868174ce8f61012 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 1.2E-26 T 09-03-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS11210 a877fa7b187036f56868174ce8f61012 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 1.2E-26 T 09-03-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS11210 a877fa7b187036f56868174ce8f61012 590 Gene3D G3DSA:3.30.930.10 415 585 3.5E-112 T 09-03-2017 RG43_RS11210 a877fa7b187036f56868174ce8f61012 590 Gene3D G3DSA:3.30.930.10 131 275 3.5E-112 T 09-03-2017 RG43_RS11210 a877fa7b187036f56868174ce8f61012 590 SUPERFAMILY SSF55681 108 287 1.7E-106 T 09-03-2017 RG43_RS11210 a877fa7b187036f56868174ce8f61012 590 SUPERFAMILY SSF55681 420 584 1.7E-106 T 09-03-2017 RG43_RS11210 a877fa7b187036f56868174ce8f61012 590 SUPERFAMILY SSF50249 1 105 1.18E-34 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS09805 ac15aa0045fecc85d8b390c1bd5bd020 75 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 6 30 - T 09-03-2017 IPR001455 TusA-like domain RG43_RS09805 ac15aa0045fecc85d8b390c1bd5bd020 75 Pfam PF01206 Sulfurtransferase TusA 4 74 1.9E-18 T 09-03-2017 IPR001455 TusA-like domain RG43_RS09805 ac15aa0045fecc85d8b390c1bd5bd020 75 Gene3D G3DSA:3.30.110.40 3 74 1.1E-22 T 09-03-2017 IPR001455 TusA-like domain RG43_RS09805 ac15aa0045fecc85d8b390c1bd5bd020 75 SUPERFAMILY SSF64307 3 74 6.02E-21 T 09-03-2017 IPR001455 TusA-like domain RG43_RS01850 e9c86b7849bb547492748dd8ddfc69fc 694 Pfam PF02446 4-alpha-glucanotransferase 148 664 5.8E-131 T 09-03-2017 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 RG43_RS01850 e9c86b7849bb547492748dd8ddfc69fc 694 SUPERFAMILY SSF51445 142 570 1.17E-147 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily RG43_RS01850 e9c86b7849bb547492748dd8ddfc69fc 694 SUPERFAMILY SSF51445 608 681 1.17E-147 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily RG43_RS01850 e9c86b7849bb547492748dd8ddfc69fc 694 Gene3D G3DSA:3.20.20.80 140 573 2.7E-164 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RG43_RS01850 e9c86b7849bb547492748dd8ddfc69fc 694 Gene3D G3DSA:3.20.20.80 612 686 2.7E-164 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RG43_RS01850 e9c86b7849bb547492748dd8ddfc69fc 694 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 100 685 3.9E-303 T 09-03-2017 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 RG43_RS10525 30de5ff88631900accaa2d048bc7b428 193 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 72 191 1.0E-38 T 09-03-2017 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly RG43_RS10890 0840d3b44f15a2065e33b59ffeff485f 218 SUPERFAMILY SSF46894 147 210 2.55E-16 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RG43_RS10890 0840d3b44f15a2065e33b59ffeff485f 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 204 2.9E-22 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS10890 0840d3b44f15a2065e33b59ffeff485f 218 Gene3D G3DSA:3.40.50.2300 2 119 5.8E-35 T 09-03-2017 RG43_RS10890 0840d3b44f15a2065e33b59ffeff485f 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS10890 0840d3b44f15a2065e33b59ffeff485f 218 SUPERFAMILY SSF52172 3 161 1.61E-33 T 09-03-2017 IPR011006 CheY-like superfamily RG43_RS10890 0840d3b44f15a2065e33b59ffeff485f 218 Gene3D G3DSA:1.10.10.10 120 211 2.6E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS10890 0840d3b44f15a2065e33b59ffeff485f 218 SMART SM00448 2 115 8.8E-32 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS10890 0840d3b44f15a2065e33b59ffeff485f 218 Pfam PF00072 Response regulator receiver domain 4 115 7.5E-31 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS10890 0840d3b44f15a2065e33b59ffeff485f 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 7.5E-11 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS10890 0840d3b44f15a2065e33b59ffeff485f 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 7.5E-11 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS10890 0840d3b44f15a2065e33b59ffeff485f 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 7.5E-11 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS10890 0840d3b44f15a2065e33b59ffeff485f 218 SMART SM00421 147 204 2.4E-19 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS18315 36dc0ab25d42ce4c63c458fdcad0c089 288 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 37.451 T 09-03-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 RG43_RS18315 36dc0ab25d42ce4c63c458fdcad0c089 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 9.2E-89 T 09-03-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 RG43_RS18315 36dc0ab25d42ce4c63c458fdcad0c089 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 9.2E-89 T 09-03-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 RG43_RS18315 36dc0ab25d42ce4c63c458fdcad0c089 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 9.2E-89 T 09-03-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 RG43_RS18315 36dc0ab25d42ce4c63c458fdcad0c089 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 9.2E-89 T 09-03-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 RG43_RS18315 36dc0ab25d42ce4c63c458fdcad0c089 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 9.2E-89 T 09-03-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 RG43_RS18315 36dc0ab25d42ce4c63c458fdcad0c089 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 9.2E-89 T 09-03-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 RG43_RS18315 36dc0ab25d42ce4c63c458fdcad0c089 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 9.2E-89 T 09-03-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 RG43_RS18315 36dc0ab25d42ce4c63c458fdcad0c089 288 SUPERFAMILY SSF51735 123 281 5.59E-52 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS18315 36dc0ab25d42ce4c63c458fdcad0c089 288 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 6.6E-40 T 09-03-2017 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 RG43_RS18315 36dc0ab25d42ce4c63c458fdcad0c089 288 SUPERFAMILY SSF53223 3 122 7.96E-41 T 09-03-2017 RG43_RS18315 36dc0ab25d42ce4c63c458fdcad0c089 288 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 09-03-2017 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 RG43_RS18315 36dc0ab25d42ce4c63c458fdcad0c089 288 Gene3D G3DSA:3.40.50.720 140 264 6.3E-51 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS18315 36dc0ab25d42ce4c63c458fdcad0c089 288 Gene3D G3DSA:3.40.192.10 7 139 9.2E-52 T 09-03-2017 RG43_RS18315 36dc0ab25d42ce4c63c458fdcad0c089 288 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 279 1.7E-67 T 09-03-2017 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 RG43_RS18315 36dc0ab25d42ce4c63c458fdcad0c089 288 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 09-03-2017 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 RG43_RS17405 753b0fd70db6b7058990018f6ede9e17 115 PIRSF PIRSF000169 1 115 3.9E-42 T 09-03-2017 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 RG43_RS17405 753b0fd70db6b7058990018f6ede9e17 115 Gene3D G3DSA:1.20.1300.10 1 115 4.7E-40 T 09-03-2017 RG43_RS17405 753b0fd70db6b7058990018f6ede9e17 115 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 113 3.2E-37 T 09-03-2017 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 RG43_RS17405 753b0fd70db6b7058990018f6ede9e17 115 SUPERFAMILY SSF81343 5 115 1.96E-31 T 09-03-2017 RG43_RS17405 753b0fd70db6b7058990018f6ede9e17 115 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 11 105 2.0E-6 T 09-03-2017 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 RG43_RS16425 06492c649ddc5b0e81a734de36500f67 208 Gene3D G3DSA:1.20.1050.10 84 203 1.8E-30 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like RG43_RS16425 06492c649ddc5b0e81a734de36500f67 208 SUPERFAMILY SSF52833 1 85 4.35E-23 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS16425 06492c649ddc5b0e81a734de36500f67 208 Gene3D G3DSA:3.40.30.10 1 82 4.5E-24 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS16425 06492c649ddc5b0e81a734de36500f67 208 SUPERFAMILY SSF47616 84 203 2.23E-28 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like RG43_RS16425 06492c649ddc5b0e81a734de36500f67 208 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 76 3.2E-14 T 09-03-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RG43_RS16425 06492c649ddc5b0e81a734de36500f67 208 Pfam PF00043 Glutathione S-transferase, C-terminal domain 121 197 3.3E-11 T 09-03-2017 IPR004046 Glutathione S-transferase, C-terminal RG43_RS18710 ddf54e2a1876bd2de0b1097122664d99 117 Gene3D G3DSA:3.30.70.900 1 116 2.3E-57 T 09-03-2017 RG43_RS18710 ddf54e2a1876bd2de0b1097122664d99 117 PIRSF PIRSF007028 1 117 2.6E-56 T 09-03-2017 IPR009874 Protein of unknown function DUF1428 RG43_RS18710 ddf54e2a1876bd2de0b1097122664d99 117 SUPERFAMILY SSF54909 1 116 1.2E-53 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel RG43_RS18710 ddf54e2a1876bd2de0b1097122664d99 117 Pfam PF07237 Protein of unknown function (DUF1428) 2 103 2.5E-47 T 09-03-2017 IPR009874 Protein of unknown function DUF1428 RG43_RS26845 7cc03ec35f5507fac252246e7ac0d8e4 178 Gene3D G3DSA:3.30.1360.100 101 178 2.3E-32 T 09-03-2017 IPR023229 Type II secretion system protein M, periplasmic domain RG43_RS26845 7cc03ec35f5507fac252246e7ac0d8e4 178 PIRSF PIRSF006291 20 177 1.4E-31 T 09-03-2017 IPR007690 Type II secretion system, protein M GO:0006858 RG43_RS26845 7cc03ec35f5507fac252246e7ac0d8e4 178 SUPERFAMILY SSF103054 102 177 1.7E-20 T 09-03-2017 IPR023229 Type II secretion system protein M, periplasmic domain RG43_RS26845 7cc03ec35f5507fac252246e7ac0d8e4 178 Pfam PF04612 Type II secretion system (T2SS), protein M 24 177 2.7E-42 T 09-03-2017 IPR007690 Type II secretion system, protein M GO:0006858 RG43_RS04470 7cc03ec35f5507fac252246e7ac0d8e4 178 Gene3D G3DSA:3.30.1360.100 101 178 2.3E-32 T 09-03-2017 IPR023229 Type II secretion system protein M, periplasmic domain RG43_RS04470 7cc03ec35f5507fac252246e7ac0d8e4 178 PIRSF PIRSF006291 20 177 1.4E-31 T 09-03-2017 IPR007690 Type II secretion system, protein M GO:0006858 RG43_RS04470 7cc03ec35f5507fac252246e7ac0d8e4 178 SUPERFAMILY SSF103054 102 177 1.7E-20 T 09-03-2017 IPR023229 Type II secretion system protein M, periplasmic domain RG43_RS04470 7cc03ec35f5507fac252246e7ac0d8e4 178 Pfam PF04612 Type II secretion system (T2SS), protein M 24 177 2.7E-42 T 09-03-2017 IPR007690 Type II secretion system, protein M GO:0006858 RG43_RS02400 269efc68924760e54d96bb26e1d8210a 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 4.8E-14 T 09-03-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS02400 269efc68924760e54d96bb26e1d8210a 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 4.8E-14 T 09-03-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS02400 269efc68924760e54d96bb26e1d8210a 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 4.8E-14 T 09-03-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS02400 269efc68924760e54d96bb26e1d8210a 84 SUPERFAMILY SSF50249 5 82 7.28E-34 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS02400 269efc68924760e54d96bb26e1d8210a 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 6 76 7.0E-36 T 09-03-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS02400 269efc68924760e54d96bb26e1d8210a 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 09-03-2017 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02400 269efc68924760e54d96bb26e1d8210a 84 Gene3D G3DSA:2.40.50.140 6 82 4.4E-37 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS02400 269efc68924760e54d96bb26e1d8210a 84 Pfam PF00366 Ribosomal protein S17 10 76 1.7E-34 T 09-03-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS02400 269efc68924760e54d96bb26e1d8210a 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 1.0E-38 T 09-03-2017 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS02400 269efc68924760e54d96bb26e1d8210a 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 3 81 26.39 T 09-03-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS26780 f387fb41933336fa2b256c5aacd833c8 1474 SMART SM01276 1036 1336 2.1E-87 T 09-03-2017 IPR031161 Peptidase family M60 domain RG43_RS26780 f387fb41933336fa2b256c5aacd833c8 1474 Pfam PF13322 Domain of unknown function (DUF4092) 371 539 2.5E-92 T 09-03-2017 IPR025385 Domain of unknown function DUF4092 RG43_RS26780 f387fb41933336fa2b256c5aacd833c8 1474 Pfam PF13402 Peptidase M60, enhancin and enhancin-like 1036 1419 1.1E-69 T 09-03-2017 IPR031161 Peptidase family M60 domain RG43_RS04405 f387fb41933336fa2b256c5aacd833c8 1474 SMART SM01276 1036 1336 2.1E-87 T 09-03-2017 IPR031161 Peptidase family M60 domain RG43_RS04405 f387fb41933336fa2b256c5aacd833c8 1474 Pfam PF13322 Domain of unknown function (DUF4092) 371 539 2.5E-92 T 09-03-2017 IPR025385 Domain of unknown function DUF4092 RG43_RS04405 f387fb41933336fa2b256c5aacd833c8 1474 Pfam PF13402 Peptidase M60, enhancin and enhancin-like 1036 1419 1.1E-69 T 09-03-2017 IPR031161 Peptidase family M60 domain RG43_RS10840 96223980c949d33266ebbdc693b1e3a4 239 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 43 56 - T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS10840 96223980c949d33266ebbdc693b1e3a4 239 Gene3D G3DSA:1.10.10.10 173 238 1.2E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS10840 96223980c949d33266ebbdc693b1e3a4 239 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 16 236 6.7E-88 T 09-03-2017 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RG43_RS10840 96223980c949d33266ebbdc693b1e3a4 239 SUPERFAMILY SSF88659 160 237 1.76E-20 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS10840 96223980c949d33266ebbdc693b1e3a4 239 Pfam PF04545 Sigma-70, region 4 185 233 6.7E-17 T 09-03-2017 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS10840 96223980c949d33266ebbdc693b1e3a4 239 PIRSF PIRSF000770 1 238 1.7E-42 T 09-03-2017 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 RG43_RS10840 96223980c949d33266ebbdc693b1e3a4 239 SUPERFAMILY SSF88946 5 88 3.61E-23 T 09-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS10840 96223980c949d33266ebbdc693b1e3a4 239 Gene3D G3DSA:1.10.10.10 88 135 7.5E-11 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS10840 96223980c949d33266ebbdc693b1e3a4 239 Pfam PF04542 Sigma-70 region 2 16 88 2.1E-16 T 09-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS10840 96223980c949d33266ebbdc693b1e3a4 239 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 5 239 64.488 T 09-03-2017 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RG43_RS10840 96223980c949d33266ebbdc693b1e3a4 239 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 206 232 - T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS10840 96223980c949d33266ebbdc693b1e3a4 239 Gene3D G3DSA:1.10.601.10 11 80 1.1E-14 T 09-03-2017 RG43_RS10840 96223980c949d33266ebbdc693b1e3a4 239 PRINTS PR00046 Major sigma-70 factor signature 67 75 2.6E-13 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS10840 96223980c949d33266ebbdc693b1e3a4 239 PRINTS PR00046 Major sigma-70 factor signature 221 232 2.6E-13 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS10840 96223980c949d33266ebbdc693b1e3a4 239 PRINTS PR00046 Major sigma-70 factor signature 189 201 2.6E-13 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS10840 96223980c949d33266ebbdc693b1e3a4 239 PRINTS PR00046 Major sigma-70 factor signature 43 56 2.6E-13 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS10840 96223980c949d33266ebbdc693b1e3a4 239 PRINTS PR00046 Major sigma-70 factor signature 206 221 2.6E-13 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS10840 96223980c949d33266ebbdc693b1e3a4 239 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 236 1.1E-32 T 09-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS10840 96223980c949d33266ebbdc693b1e3a4 239 SUPERFAMILY SSF88659 89 156 5.67E-17 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS10840 96223980c949d33266ebbdc693b1e3a4 239 Pfam PF04539 Sigma-70 region 3 97 166 5.6E-20 T 09-03-2017 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RG43_RS12030 e002fe3eb82c82181be0c457433a6af7 642 SUPERFAMILY SSF81271 3 61 7.85E-17 T 09-03-2017 IPR012676 TGS-like KEGG: 00970+6.1.1.3 RG43_RS12030 e002fe3eb82c82181be0c457433a6af7 642 Gene3D G3DSA:3.30.54.20 130 187 5.6E-20 T 09-03-2017 RG43_RS12030 e002fe3eb82c82181be0c457433a6af7 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 318 528 6.8E-52 T 09-03-2017 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS12030 e002fe3eb82c82181be0c457433a6af7 642 Gene3D G3DSA:3.30.980.10 65 129 7.0E-42 T 09-03-2017 RG43_RS12030 e002fe3eb82c82181be0c457433a6af7 642 Gene3D G3DSA:3.30.980.10 188 224 7.0E-42 T 09-03-2017 RG43_RS12030 e002fe3eb82c82181be0c457433a6af7 642 Pfam PF03129 Anticodon binding domain 541 630 4.6E-24 T 09-03-2017 IPR004154 Anticodon-binding RG43_RS12030 e002fe3eb82c82181be0c457433a6af7 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 631 1.4E-248 T 09-03-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RG43_RS12030 e002fe3eb82c82181be0c457433a6af7 642 SUPERFAMILY SSF55681 243 525 3.94E-96 T 09-03-2017 RG43_RS12030 e002fe3eb82c82181be0c457433a6af7 642 Pfam PF02824 TGS domain 4 61 9.6E-13 T 09-03-2017 IPR004095 TGS KEGG: 00970+6.1.1.3 RG43_RS12030 e002fe3eb82c82181be0c457433a6af7 642 SMART SM00863 170 219 4.6E-19 T 09-03-2017 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RG43_RS12030 e002fe3eb82c82181be0c457433a6af7 642 Gene3D G3DSA:3.30.930.10 242 529 8.8E-122 T 09-03-2017 RG43_RS12030 e002fe3eb82c82181be0c457433a6af7 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 219 4.7E-14 T 09-03-2017 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RG43_RS12030 e002fe3eb82c82181be0c457433a6af7 642 Gene3D G3DSA:3.40.50.800 532 640 6.5E-40 T 09-03-2017 IPR004154 Anticodon-binding RG43_RS12030 e002fe3eb82c82181be0c457433a6af7 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 1.4E-54 T 09-03-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RG43_RS12030 e002fe3eb82c82181be0c457433a6af7 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 1.4E-54 T 09-03-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RG43_RS12030 e002fe3eb82c82181be0c457433a6af7 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 1.4E-54 T 09-03-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RG43_RS12030 e002fe3eb82c82181be0c457433a6af7 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 1.4E-54 T 09-03-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RG43_RS12030 e002fe3eb82c82181be0c457433a6af7 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 1.4E-54 T 09-03-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RG43_RS12030 e002fe3eb82c82181be0c457433a6af7 642 SUPERFAMILY SSF55186 63 241 1.83E-65 T 09-03-2017 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 RG43_RS12030 e002fe3eb82c82181be0c457433a6af7 642 Gene3D G3DSA:3.10.20.30 1 64 1.6E-24 T 09-03-2017 IPR012675 Beta-grasp domain RG43_RS12030 e002fe3eb82c82181be0c457433a6af7 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 634 34.31 T 09-03-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RG43_RS12030 e002fe3eb82c82181be0c457433a6af7 642 SUPERFAMILY SSF52954 530 636 2.11E-34 T 09-03-2017 IPR004154 Anticodon-binding RG43_RS12640 0dda56a7bb0cd4a3db7e3c87005cdf81 240 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 238 1.8E-22 T 09-03-2017 RG43_RS12640 0dda56a7bb0cd4a3db7e3c87005cdf81 240 Gene3D G3DSA:3.40.50.720 9 239 2.1E-41 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS12640 0dda56a7bb0cd4a3db7e3c87005cdf81 240 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RG43_RS12640 0dda56a7bb0cd4a3db7e3c87005cdf81 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.5E-11 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS12640 0dda56a7bb0cd4a3db7e3c87005cdf81 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 2.5E-11 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS12640 0dda56a7bb0cd4a3db7e3c87005cdf81 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 2.5E-11 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS12640 0dda56a7bb0cd4a3db7e3c87005cdf81 240 SUPERFAMILY SSF51735 9 239 1.9E-36 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS25470 87a0407f808f3b21b2ac263219666221 460 SMART SM00382 142 327 4.5E-4 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS25470 87a0407f808f3b21b2ac263219666221 460 SUPERFAMILY SSF47917 345 459 2.07E-55 T 09-03-2017 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RG43_RS25470 87a0407f808f3b21b2ac263219666221 460 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 342 5.6E-64 T 09-03-2017 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RG43_RS25470 87a0407f808f3b21b2ac263219666221 460 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 460 57.065 T 09-03-2017 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201 RG43_RS25470 87a0407f808f3b21b2ac263219666221 460 Gene3D G3DSA:2.40.10.170 2 75 2.0E-30 T 09-03-2017 RG43_RS25470 87a0407f808f3b21b2ac263219666221 460 SUPERFAMILY SSF52540 77 348 1.44E-90 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25470 87a0407f808f3b21b2ac263219666221 460 Gene3D G3DSA:3.40.50.300 77 343 3.7E-109 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25470 87a0407f808f3b21b2ac263219666221 460 Gene3D G3DSA:1.10.1140.10 345 460 4.1E-58 T 09-03-2017 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RG43_RS25470 87a0407f808f3b21b2ac263219666221 460 SUPERFAMILY SSF50615 3 75 1.99E-24 T 09-03-2017 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RG43_RS25470 87a0407f808f3b21b2ac263219666221 460 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 460 2.3E-264 T 09-03-2017 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201 RG43_RS25470 87a0407f808f3b21b2ac263219666221 460 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 333 342 - T 09-03-2017 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RG43_RS25470 87a0407f808f3b21b2ac263219666221 460 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 72 1.9E-20 T 09-03-2017 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RG43_RS24545 e5a904638cb9b4a8bcc407cc8b46856c 300 Gene3D G3DSA:3.30.70.20 104 137 2.1E-11 T 09-03-2017 RG43_RS24545 e5a904638cb9b4a8bcc407cc8b46856c 300 Gene3D G3DSA:3.30.70.20 138 172 6.6E-15 T 09-03-2017 RG43_RS24545 e5a904638cb9b4a8bcc407cc8b46856c 300 SUPERFAMILY SSF54862 28 271 6.38E-72 T 09-03-2017 RG43_RS24545 e5a904638cb9b4a8bcc407cc8b46856c 300 Gene3D G3DSA:1.20.5.480 247 294 1.9E-26 T 09-03-2017 RG43_RS24545 e5a904638cb9b4a8bcc407cc8b46856c 300 PIRSF PIRSF036298 1 300 7.1E-166 T 09-03-2017 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 RG43_RS24545 e5a904638cb9b4a8bcc407cc8b46856c 300 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 7 289 1.3E-144 T 09-03-2017 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 RG43_RS24545 e5a904638cb9b4a8bcc407cc8b46856c 300 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 133 144 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS24545 e5a904638cb9b4a8bcc407cc8b46856c 300 Gene3D G3DSA:3.30.70.20 30 103 8.5E-37 T 09-03-2017 RG43_RS24545 e5a904638cb9b4a8bcc407cc8b46856c 300 Gene3D G3DSA:3.30.70.20 173 227 8.5E-37 T 09-03-2017 RG43_RS24545 e5a904638cb9b4a8bcc407cc8b46856c 300 Pfam PF13247 4Fe-4S dicluster domain 92 188 8.3E-25 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS24545 e5a904638cb9b4a8bcc407cc8b46856c 300 Pfam PF09163 Formate dehydrogenase N, transmembrane 246 288 4.3E-21 T 09-03-2017 IPR015246 Formate dehydrogenase, transmembrane RG43_RS09545 8c6f9fcfa211f94f399ba09ead8fd379 279 Gene3D G3DSA:3.90.550.10 5 241 1.7E-41 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS09545 8c6f9fcfa211f94f399ba09ead8fd379 279 SUPERFAMILY SSF53448 5 233 2.63E-43 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS09545 8c6f9fcfa211f94f399ba09ead8fd379 279 Pfam PF00535 Glycosyl transferase family 2 8 154 5.6E-29 T 09-03-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RG43_RS09545 8c6f9fcfa211f94f399ba09ead8fd379 279 TIGRFAM TIGR04017 WcaA: colanic acid biosynthesis glycosyltransferase WcaA 1 279 6.6E-195 T 09-03-2017 IPR024009 Colanic acid biosynthesis, glycosyl transferase, WcaA RG43_RS02140 05eaabc0366d5e465a02dfd9e5ef2876 200 Pfam PF02661 Fic/DOC family 58 152 2.4E-14 T 09-03-2017 IPR003812 Fido domain RG43_RS02140 05eaabc0366d5e465a02dfd9e5ef2876 200 SUPERFAMILY SSF140931 41 195 1.19E-29 T 09-03-2017 IPR003812 Fido domain RG43_RS02140 05eaabc0366d5e465a02dfd9e5ef2876 200 Gene3D G3DSA:1.10.3290.10 11 196 2.3E-54 T 09-03-2017 IPR003812 Fido domain RG43_RS08280 53125c9d93bd98e258222dccef54316e 180 Pfam PF00293 NUDIX domain 36 154 3.1E-18 T 09-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 RG43_RS08280 53125c9d93bd98e258222dccef54316e 180 PIRSF PIRSF017340 1 171 6.7E-76 T 09-03-2017 IPR024195 NUDIX hydrolase, YfcD, predicted GO:0016817 RG43_RS08280 53125c9d93bd98e258222dccef54316e 180 SUPERFAMILY SSF55811 9 166 3.93E-36 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 RG43_RS08280 53125c9d93bd98e258222dccef54316e 180 Gene3D G3DSA:3.90.79.10 2 177 2.3E-63 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 RG43_RS04715 557be95d49fd586dc6f97ed03d02e027 402 Pfam PF01609 Transposase DDE domain 91 327 1.2E-26 T 09-03-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 RG43_RS04715 557be95d49fd586dc6f97ed03d02e027 402 Gene3D G3DSA:3.90.350.10 263 300 1.9E-4 T 09-03-2017 IPR014736 Transposase, Tn5-like, core RG43_RS04715 557be95d49fd586dc6f97ed03d02e027 402 SUPERFAMILY SSF53098 1 376 2.73E-70 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS01755 557be95d49fd586dc6f97ed03d02e027 402 Pfam PF01609 Transposase DDE domain 91 327 1.2E-26 T 09-03-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 RG43_RS01755 557be95d49fd586dc6f97ed03d02e027 402 Gene3D G3DSA:3.90.350.10 263 300 1.9E-4 T 09-03-2017 IPR014736 Transposase, Tn5-like, core RG43_RS01755 557be95d49fd586dc6f97ed03d02e027 402 SUPERFAMILY SSF53098 1 376 2.73E-70 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS04765 557be95d49fd586dc6f97ed03d02e027 402 Pfam PF01609 Transposase DDE domain 91 327 1.2E-26 T 09-03-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 RG43_RS04765 557be95d49fd586dc6f97ed03d02e027 402 Gene3D G3DSA:3.90.350.10 263 300 1.9E-4 T 09-03-2017 IPR014736 Transposase, Tn5-like, core RG43_RS04765 557be95d49fd586dc6f97ed03d02e027 402 SUPERFAMILY SSF53098 1 376 2.73E-70 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS18595 f8f4894b2ba9ef23ee23d36a37b7e00f 434 SUPERFAMILY SSF53613 36 305 3.12E-45 T 09-03-2017 IPR029056 Ribokinase-like RG43_RS18595 f8f4894b2ba9ef23ee23d36a37b7e00f 434 SUPERFAMILY SSF53613 338 416 3.12E-45 T 09-03-2017 IPR029056 Ribokinase-like RG43_RS18595 f8f4894b2ba9ef23ee23d36a37b7e00f 434 Gene3D G3DSA:3.30.1110.10 45 94 8.2E-8 T 09-03-2017 RG43_RS18595 f8f4894b2ba9ef23ee23d36a37b7e00f 434 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 352 365 - T 09-03-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RG43_RS18595 f8f4894b2ba9ef23ee23d36a37b7e00f 434 Gene3D G3DSA:3.40.1190.20 95 298 2.2E-48 T 09-03-2017 IPR029056 Ribokinase-like RG43_RS18595 f8f4894b2ba9ef23ee23d36a37b7e00f 434 Gene3D G3DSA:3.40.1190.20 337 433 2.2E-48 T 09-03-2017 IPR029056 Ribokinase-like RG43_RS18595 f8f4894b2ba9ef23ee23d36a37b7e00f 434 Pfam PF00294 pfkB family carbohydrate kinase 79 293 5.5E-9 T 09-03-2017 IPR011611 Carbohydrate kinase PfkB RG43_RS10455 6ec59eda24f7f9eb31a17b38996222b7 112 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 6 108 1.7E-12 T 09-03-2017 IPR008767 Bacteriophage SPP1, head-tail adaptor RG43_RS10455 6ec59eda24f7f9eb31a17b38996222b7 112 Pfam PF05521 Phage head-tail joining protein 7 106 1.0E-17 T 09-03-2017 IPR008767 Bacteriophage SPP1, head-tail adaptor RG43_RS17210 df5304ab4389b0ae623522710047538f 490 SUPERFAMILY SSF52540 252 479 1.13E-40 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS17210 df5304ab4389b0ae623522710047538f 490 Gene3D G3DSA:3.40.50.300 254 467 5.0E-40 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS17210 df5304ab4389b0ae623522710047538f 490 Pfam PF00005 ABC transporter 276 429 5.1E-27 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS17210 df5304ab4389b0ae623522710047538f 490 Pfam PF00005 ABC transporter 23 163 1.6E-16 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS17210 df5304ab4389b0ae623522710047538f 490 Gene3D G3DSA:3.40.50.300 10 228 3.4E-34 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS17210 df5304ab4389b0ae623522710047538f 490 SUPERFAMILY SSF52540 10 225 1.23E-34 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS17210 df5304ab4389b0ae623522710047538f 490 SMART SM00382 285 480 2.2E-8 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS17210 df5304ab4389b0ae623522710047538f 490 SMART SM00382 28 219 1.3E-5 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS20265 0b97cb39badf1cf1330a1289f606ff6d 144 SUPERFAMILY SSF52540 6 92 2.26E-7 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS20265 0b97cb39badf1cf1330a1289f606ff6d 144 Gene3D G3DSA:3.40.50.300 37 67 1.0E-6 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS14195 7e6505cd3b62bd795c957ca416f31030 179 Pfam PF04279 Intracellular septation protein A 1 175 1.1E-72 T 09-03-2017 IPR006008 Intracellular septation protein A GO:0016021 RG43_RS14195 7e6505cd3b62bd795c957ca416f31030 179 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 178 3.3E-75 T 09-03-2017 IPR006008 Intracellular septation protein A GO:0016021 RG43_RS14195 7e6505cd3b62bd795c957ca416f31030 179 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 176 19.531 T 09-03-2017 IPR006008 Intracellular septation protein A GO:0016021 RG43_RS18385 dbf945d85390a345b6c5ebd108d1dba8 411 TIGRFAM TIGR03176 AllC: allantoate amidohydrolase 1 411 5.2E-232 T 09-03-2017 IPR017591 Allantoate amidohydrolase GO:0000256|GO:0009442|GO:0030145|GO:0042803|GO:0047652 RG43_RS18385 dbf945d85390a345b6c5ebd108d1dba8 411 Pfam PF01546 Peptidase family M20/M25/M40 79 405 5.8E-32 T 09-03-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RG43_RS18385 dbf945d85390a345b6c5ebd108d1dba8 411 Gene3D G3DSA:3.30.70.360 225 324 1.0E-39 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain RG43_RS18385 dbf945d85390a345b6c5ebd108d1dba8 411 SUPERFAMILY SSF55031 212 328 1.03E-25 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain RG43_RS18385 dbf945d85390a345b6c5ebd108d1dba8 411 PIRSF PIRSF001235 2 411 1.3E-131 T 09-03-2017 IPR010158 Amidase, carbamoylase-type GO:0008152|GO:0016813 RG43_RS18385 dbf945d85390a345b6c5ebd108d1dba8 411 SUPERFAMILY SSF53187 6 221 4.57E-82 T 09-03-2017 RG43_RS18385 dbf945d85390a345b6c5ebd108d1dba8 411 SUPERFAMILY SSF53187 338 408 4.57E-82 T 09-03-2017 RG43_RS18385 dbf945d85390a345b6c5ebd108d1dba8 411 Gene3D G3DSA:3.40.630.10 5 224 2.4E-98 T 09-03-2017 RG43_RS18385 dbf945d85390a345b6c5ebd108d1dba8 411 Gene3D G3DSA:3.40.630.10 350 408 2.4E-98 T 09-03-2017 RG43_RS18385 dbf945d85390a345b6c5ebd108d1dba8 411 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 7 407 1.5E-197 T 09-03-2017 IPR010158 Amidase, carbamoylase-type GO:0008152|GO:0016813 RG43_RS14185 f0ab805b26c6fb489dca10daeb24cc5d 212 Gene3D G3DSA:2.40.160.20 22 212 4.4E-73 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RG43_RS14185 f0ab805b26c6fb489dca10daeb24cc5d 212 Pfam PF03922 OmpW family 23 212 3.0E-73 T 09-03-2017 IPR005618 Outer membrane protein, OmpW GO:0019867 RG43_RS14185 f0ab805b26c6fb489dca10daeb24cc5d 212 SUPERFAMILY SSF56925 28 212 9.16E-26 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RG43_RS26115 da62216f243feb3b37da21c078a3f888 415 SUPERFAMILY SSF116734 215 407 9.32E-26 T 09-03-2017 RG43_RS26115 da62216f243feb3b37da21c078a3f888 415 Pfam PF01420 Type I restriction modification DNA specificity domain 108 197 3.4E-6 T 09-03-2017 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 RG43_RS26115 da62216f243feb3b37da21c078a3f888 415 Pfam PF01420 Type I restriction modification DNA specificity domain 228 392 4.5E-10 T 09-03-2017 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 RG43_RS26115 da62216f243feb3b37da21c078a3f888 415 SUPERFAMILY SSF116734 12 209 4.74E-30 T 09-03-2017 RG43_RS03740 da62216f243feb3b37da21c078a3f888 415 SUPERFAMILY SSF116734 215 407 9.32E-26 T 09-03-2017 RG43_RS03740 da62216f243feb3b37da21c078a3f888 415 Pfam PF01420 Type I restriction modification DNA specificity domain 108 197 3.4E-6 T 09-03-2017 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 RG43_RS03740 da62216f243feb3b37da21c078a3f888 415 Pfam PF01420 Type I restriction modification DNA specificity domain 228 392 4.5E-10 T 09-03-2017 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 RG43_RS03740 da62216f243feb3b37da21c078a3f888 415 SUPERFAMILY SSF116734 12 209 4.74E-30 T 09-03-2017 RG43_RS01635 329d76b8ff6238881a17711c7f087d5c 73 SUPERFAMILY SSF143120 1 69 1.44E-15 T 09-03-2017 RG43_RS01635 329d76b8ff6238881a17711c7f087d5c 73 Gene3D G3DSA:3.40.1620.10 1 49 7.0E-19 T 09-03-2017 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RG43_RS01635 329d76b8ff6238881a17711c7f087d5c 73 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 53 2.2E-16 T 09-03-2017 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RG43_RS01635 329d76b8ff6238881a17711c7f087d5c 73 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 6 54 2.3E-15 T 09-03-2017 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RG43_RS10685 ad19a7639463b8497f82a7cafc7e6d6c 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 88 4.1E-35 T 09-03-2017 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 RG43_RS10685 ad19a7639463b8497f82a7cafc7e6d6c 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 4.9E-25 T 09-03-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 RG43_RS10685 ad19a7639463b8497f82a7cafc7e6d6c 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 4.9E-25 T 09-03-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 RG43_RS10685 ad19a7639463b8497f82a7cafc7e6d6c 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 4.9E-25 T 09-03-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 RG43_RS10685 ad19a7639463b8497f82a7cafc7e6d6c 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 2.3E-30 T 09-03-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 RG43_RS10685 ad19a7639463b8497f82a7cafc7e6d6c 89 PIRSF PIRSF004669 1 89 6.1E-34 T 09-03-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 RG43_RS15675 e708f2101280a7bb3d02956365052fbb 148 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 9 143 2.2E-45 T 09-03-2017 IPR023485 Phosphotyrosine protein phosphatase I superfamily RG43_RS15675 e708f2101280a7bb3d02956365052fbb 148 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 101 114 8.8E-29 T 09-03-2017 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RG43_RS15675 e708f2101280a7bb3d02956365052fbb 148 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 45 61 8.8E-29 T 09-03-2017 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RG43_RS15675 e708f2101280a7bb3d02956365052fbb 148 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 9 26 8.8E-29 T 09-03-2017 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RG43_RS15675 e708f2101280a7bb3d02956365052fbb 148 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 94 8.8E-29 T 09-03-2017 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RG43_RS15675 e708f2101280a7bb3d02956365052fbb 148 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 117 132 8.8E-29 T 09-03-2017 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RG43_RS15675 e708f2101280a7bb3d02956365052fbb 148 Gene3D G3DSA:3.40.50.270 6 147 1.1E-45 T 09-03-2017 RG43_RS15675 e708f2101280a7bb3d02956365052fbb 148 SUPERFAMILY SSF52788 5 146 9.29E-42 T 09-03-2017 IPR023485 Phosphotyrosine protein phosphatase I superfamily RG43_RS15675 e708f2101280a7bb3d02956365052fbb 148 SMART SM00226 7 145 1.6E-68 T 09-03-2017 IPR023485 Phosphotyrosine protein phosphatase I superfamily RG43_RS05525 5768b8aad464bbb93fd9a61a639e46ea 397 Gene3D G3DSA:1.20.1250.20 18 185 6.3E-10 T 09-03-2017 RG43_RS05525 5768b8aad464bbb93fd9a61a639e46ea 397 Hamap MF_01585 Lysophospholipid transporter LplT [lplT]. 1 397 39.437 T 09-03-2017 IPR023727 Lysophospholipid transporter LplT GO:0005886|GO:0051977|GO:0051978 RG43_RS05525 5768b8aad464bbb93fd9a61a639e46ea 397 SUPERFAMILY SSF103473 16 396 4.58E-21 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS05525 5768b8aad464bbb93fd9a61a639e46ea 397 Pfam PF07690 Major Facilitator Superfamily 20 354 1.5E-13 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS14550 ae548444e85bfdff986bf2c68de12142 356 Pfam PF02733 Dak1 domain 18 351 1.0E-127 T 09-03-2017 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 RG43_RS14550 ae548444e85bfdff986bf2c68de12142 356 SUPERFAMILY SSF82549 10 355 3.14E-127 T 09-03-2017 RG43_RS14550 ae548444e85bfdff986bf2c68de12142 356 Gene3D G3DSA:3.30.1180.20 185 355 1.3E-69 T 09-03-2017 RG43_RS14550 ae548444e85bfdff986bf2c68de12142 356 TIGRFAM TIGR02363 dhaK1: dihydroxyacetone kinase, DhaK subunit 1 352 3.2E-157 T 09-03-2017 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 RG43_RS14550 ae548444e85bfdff986bf2c68de12142 356 Gene3D G3DSA:3.40.50.10440 12 182 4.1E-69 T 09-03-2017 RG43_RS13120 6581b8b951477a5d42ba434f47b8a049 460 SUPERFAMILY SSF46458 5 152 2.04E-23 T 09-03-2017 IPR009050 Globin-like RG43_RS13120 6581b8b951477a5d42ba434f47b8a049 460 SUPERFAMILY SSF55073 300 456 1.18E-46 T 09-03-2017 IPR029787 Nucleotide cyclase RG43_RS13120 6581b8b951477a5d42ba434f47b8a049 460 Pfam PF11563 Protoglobin 25 155 1.6E-9 T 09-03-2017 RG43_RS13120 6581b8b951477a5d42ba434f47b8a049 460 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 297 455 5.7E-53 T 09-03-2017 IPR000160 GGDEF domain RG43_RS13120 6581b8b951477a5d42ba434f47b8a049 460 SMART SM00267 283 456 2.7E-71 T 09-03-2017 IPR000160 GGDEF domain RG43_RS13120 6581b8b951477a5d42ba434f47b8a049 460 Pfam PF00990 Diguanylate cyclase, GGDEF domain 297 452 2.2E-50 T 09-03-2017 IPR000160 GGDEF domain RG43_RS13120 6581b8b951477a5d42ba434f47b8a049 460 Gene3D G3DSA:3.30.70.270 298 458 9.2E-52 T 09-03-2017 RG43_RS13120 6581b8b951477a5d42ba434f47b8a049 460 Gene3D G3DSA:1.10.490.10 19 152 2.2E-15 T 09-03-2017 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 RG43_RS05325 94de208da804ca385f33570c2fb3ac2d 505 Gene3D G3DSA:2.40.50.140 16 154 4.1E-50 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS05325 94de208da804ca385f33570c2fb3ac2d 505 Pfam PF01336 OB-fold nucleic acid binding domain 68 146 5.3E-15 T 09-03-2017 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 RG43_RS05325 94de208da804ca385f33570c2fb3ac2d 505 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 21 505 45.612 T 09-03-2017 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RG43_RS05325 94de208da804ca385f33570c2fb3ac2d 505 Gene3D G3DSA:3.30.930.10 157 500 1.3E-123 T 09-03-2017 RG43_RS05325 94de208da804ca385f33570c2fb3ac2d 505 PIRSF PIRSF039101 1 505 5.4E-206 T 09-03-2017 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RG43_RS05325 94de208da804ca385f33570c2fb3ac2d 505 SUPERFAMILY SSF55681 162 502 2.84E-123 T 09-03-2017 RG43_RS05325 94de208da804ca385f33570c2fb3ac2d 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 215 231 1.1E-39 T 09-03-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RG43_RS05325 94de208da804ca385f33570c2fb3ac2d 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 262 279 1.1E-39 T 09-03-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RG43_RS05325 94de208da804ca385f33570c2fb3ac2d 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 199 209 1.1E-39 T 09-03-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RG43_RS05325 94de208da804ca385f33570c2fb3ac2d 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 244 257 1.1E-39 T 09-03-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RG43_RS05325 94de208da804ca385f33570c2fb3ac2d 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 386 402 1.1E-39 T 09-03-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RG43_RS05325 94de208da804ca385f33570c2fb3ac2d 505 SUPERFAMILY SSF50249 13 155 1.79E-48 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS05325 94de208da804ca385f33570c2fb3ac2d 505 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 14 504 1.4E-239 T 09-03-2017 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RG43_RS05325 94de208da804ca385f33570c2fb3ac2d 505 Pfam PF00152 tRNA synthetases class II (D, K and N) 162 501 2.0E-82 T 09-03-2017 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS02965 e7b335ee1a6eca37cc7ce70d47aeab74 191 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 6 182 8.6E-53 T 09-03-2017 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 RG43_RS02965 e7b335ee1a6eca37cc7ce70d47aeab74 191 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 4 185 27.913 T 09-03-2017 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 RG43_RS02965 e7b335ee1a6eca37cc7ce70d47aeab74 191 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 9 183 1.9E-54 T 09-03-2017 IPR010664 Lipopolysaccharide assembly, LptC-related RG43_RS02965 e7b335ee1a6eca37cc7ce70d47aeab74 191 PIRSF PIRSF028513 1 186 2.8E-41 T 09-03-2017 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 RG43_RS20790 6b24d0e3456c0c421c02774e7b6efc27 308 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 19 284 1.1E-47 T 09-03-2017 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 RG43_RS20790 6b24d0e3456c0c421c02774e7b6efc27 308 SUPERFAMILY SSF52374 16 296 3.56E-88 T 09-03-2017 RG43_RS20790 6b24d0e3456c0c421c02774e7b6efc27 308 Gene3D G3DSA:3.40.50.620 14 158 1.8E-39 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS20790 6b24d0e3456c0c421c02774e7b6efc27 308 Gene3D G3DSA:3.40.50.620 170 299 5.2E-22 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS20790 6b24d0e3456c0c421c02774e7b6efc27 308 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 16 300 42.25 T 09-03-2017 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 RG43_RS20790 6b24d0e3456c0c421c02774e7b6efc27 308 PRINTS PR00987 Glutamyl-tRNA synthetase signature 19 31 6.8E-14 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 RG43_RS20790 6b24d0e3456c0c421c02774e7b6efc27 308 PRINTS PR00987 Glutamyl-tRNA synthetase signature 196 204 6.8E-14 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 RG43_RS20790 6b24d0e3456c0c421c02774e7b6efc27 308 PRINTS PR00987 Glutamyl-tRNA synthetase signature 33 44 6.8E-14 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 RG43_RS20790 6b24d0e3456c0c421c02774e7b6efc27 308 PRINTS PR00987 Glutamyl-tRNA synthetase signature 48 61 6.8E-14 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 RG43_RS20790 6b24d0e3456c0c421c02774e7b6efc27 308 PRINTS PR00987 Glutamyl-tRNA synthetase signature 180 190 6.8E-14 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 RG43_RS20790 6b24d0e3456c0c421c02774e7b6efc27 308 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 16 281 1.8E-114 T 09-03-2017 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 RG43_RS16120 5428c38a6a43a1cd085e19ad69956708 430 Gene3D G3DSA:1.10.287.40 1 104 2.4E-29 T 09-03-2017 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 RG43_RS16120 5428c38a6a43a1cd085e19ad69956708 430 SUPERFAMILY SSF46589 1 112 1.41E-32 T 09-03-2017 IPR010978 tRNA-binding arm GO:0000166 RG43_RS16120 5428c38a6a43a1cd085e19ad69956708 430 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 3.9E-34 T 09-03-2017 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 RG43_RS16120 5428c38a6a43a1cd085e19ad69956708 430 PIRSF PIRSF001529 1 430 6.3E-186 T 09-03-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 RG43_RS16120 5428c38a6a43a1cd085e19ad69956708 430 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 423 2.1E-185 T 09-03-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 RG43_RS16120 5428c38a6a43a1cd085e19ad69956708 430 PRINTS PR00981 Seryl-tRNA synthetase signature 282 295 8.6E-34 T 09-03-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 RG43_RS16120 5428c38a6a43a1cd085e19ad69956708 430 PRINTS PR00981 Seryl-tRNA synthetase signature 339 355 8.6E-34 T 09-03-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 RG43_RS16120 5428c38a6a43a1cd085e19ad69956708 430 PRINTS PR00981 Seryl-tRNA synthetase signature 270 282 8.6E-34 T 09-03-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 RG43_RS16120 5428c38a6a43a1cd085e19ad69956708 430 PRINTS PR00981 Seryl-tRNA synthetase signature 322 335 8.6E-34 T 09-03-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 RG43_RS16120 5428c38a6a43a1cd085e19ad69956708 430 PRINTS PR00981 Seryl-tRNA synthetase signature 357 373 8.6E-34 T 09-03-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 RG43_RS16120 5428c38a6a43a1cd085e19ad69956708 430 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 428 41.817 T 09-03-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 RG43_RS16120 5428c38a6a43a1cd085e19ad69956708 430 Gene3D G3DSA:3.30.930.10 105 427 1.5E-142 T 09-03-2017 RG43_RS16120 5428c38a6a43a1cd085e19ad69956708 430 SUPERFAMILY SSF55681 116 424 1.11E-99 T 09-03-2017 RG43_RS16120 5428c38a6a43a1cd085e19ad69956708 430 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 228 406 8.7E-36 T 09-03-2017 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS01895 607ba5a1ed17f38233cbee4945dc390a 773 SUPERFAMILY SSF52540 4 170 1.23E-40 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS01895 607ba5a1ed17f38233cbee4945dc390a 773 Pfam PF07664 Ferrous iron transport protein B C terminus 455 507 1.9E-20 T 09-03-2017 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 RG43_RS01895 607ba5a1ed17f38233cbee4945dc390a 773 Pfam PF02421 Ferrous iron transport protein B 5 162 3.8E-64 T 09-03-2017 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 RG43_RS01895 607ba5a1ed17f38233cbee4945dc390a 773 Pfam PF07670 Nucleoside recognition 353 443 6.1E-13 T 09-03-2017 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 RG43_RS01895 607ba5a1ed17f38233cbee4945dc390a 773 Pfam PF07670 Nucleoside recognition 512 689 8.9E-37 T 09-03-2017 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 RG43_RS01895 607ba5a1ed17f38233cbee4945dc390a 773 Gene3D G3DSA:3.40.50.300 3 171 4.9E-36 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS01895 607ba5a1ed17f38233cbee4945dc390a 773 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 10 687 5.7E-255 T 09-03-2017 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 RG43_RS15055 2d852cac7e474a97d67178c2d8c6012f 65 Gene3D G3DSA:3.30.70.1290 1 45 7.1E-13 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RG43_RS15055 2d852cac7e474a97d67178c2d8c6012f 65 Pfam PF01797 Transposase IS200 like 4 42 5.3E-6 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RG43_RS15055 2d852cac7e474a97d67178c2d8c6012f 65 SUPERFAMILY SSF143422 1 42 3.14E-8 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RG43_RS06125 5aee8ddda47f47574cc83f4f4ef7428c 349 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 77 90 - T 09-03-2017 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 RG43_RS06125 5aee8ddda47f47574cc83f4f4ef7428c 349 SUPERFAMILY SSF55120 2 340 1.17E-101 T 09-03-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RG43_RS06125 5aee8ddda47f47574cc83f4f4ef7428c 349 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 5 342 28.999 T 09-03-2017 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 RG43_RS06125 5aee8ddda47f47574cc83f4f4ef7428c 349 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 8 167 5.6E-40 T 09-03-2017 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 RG43_RS06125 5aee8ddda47f47574cc83f4f4ef7428c 349 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 188 337 5.1E-19 T 09-03-2017 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 RG43_RS06125 5aee8ddda47f47574cc83f4f4ef7428c 349 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 1 342 3.7E-106 T 09-03-2017 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 RG43_RS03505 656f9ff254f8c9624e8163d2a5c85bb0 414 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 6 407 35.868 T 09-03-2017 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 RG43_RS03505 656f9ff254f8c9624e8163d2a5c85bb0 414 SUPERFAMILY SSF118215 18 400 4.84E-95 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RG43_RS03505 656f9ff254f8c9624e8163d2a5c85bb0 414 Pfam PF00375 Sodium:dicarboxylate symporter family 18 397 5.0E-63 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RG43_RS03505 656f9ff254f8c9624e8163d2a5c85bb0 414 PRINTS PR00173 Glutamate-aspartate symporter signature 18 38 1.5E-10 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RG43_RS03505 656f9ff254f8c9624e8163d2a5c85bb0 414 PRINTS PR00173 Glutamate-aspartate symporter signature 290 316 1.5E-10 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RG43_RS03505 656f9ff254f8c9624e8163d2a5c85bb0 414 PRINTS PR00173 Glutamate-aspartate symporter signature 188 207 1.5E-10 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RG43_RS03505 656f9ff254f8c9624e8163d2a5c85bb0 414 PRINTS PR00173 Glutamate-aspartate symporter signature 325 344 1.5E-10 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RG43_RS03505 656f9ff254f8c9624e8163d2a5c85bb0 414 Gene3D G3DSA:1.10.3860.10 12 404 8.0E-85 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RG43_RS17600 51177a00932ebf33b5c86273e4214bd6 557 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 1 557 1.2E-301 T 09-03-2017 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 RG43_RS17600 51177a00932ebf33b5c86273e4214bd6 557 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 2 557 34.287 T 09-03-2017 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 RG43_RS17600 51177a00932ebf33b5c86273e4214bd6 557 Pfam PF03814 Potassium-transporting ATPase A subunit 11 556 1.2E-236 T 09-03-2017 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 RG43_RS17600 51177a00932ebf33b5c86273e4214bd6 557 PIRSF PIRSF001294 1 557 1.9E-231 T 09-03-2017 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 RG43_RS12465 681af77515750a11db37bcd4ed5ebe76 424 Gene3D G3DSA:1.10.240.10 238 321 2.7E-43 T 09-03-2017 RG43_RS12465 681af77515750a11db37bcd4ed5ebe76 424 SUPERFAMILY SSF52374 4 328 4.41E-111 T 09-03-2017 RG43_RS12465 681af77515750a11db37bcd4ed5ebe76 424 Gene3D G3DSA:3.40.50.620 4 237 3.2E-105 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS12465 681af77515750a11db37bcd4ed5ebe76 424 Pfam PF00579 tRNA synthetases class I (W and Y) 31 328 1.5E-94 T 09-03-2017 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS12465 681af77515750a11db37bcd4ed5ebe76 424 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 09-03-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS12465 681af77515750a11db37bcd4ed5ebe76 424 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 4 423 46.949 T 09-03-2017 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 RG43_RS12465 681af77515750a11db37bcd4ed5ebe76 424 Gene3D G3DSA:3.10.290.10 322 423 2.2E-30 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 RG43_RS12465 681af77515750a11db37bcd4ed5ebe76 424 SUPERFAMILY SSF55174 327 423 1.57E-20 T 09-03-2017 RG43_RS12465 681af77515750a11db37bcd4ed5ebe76 424 Pfam PF01479 S4 domain 359 403 3.9E-6 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 RG43_RS12465 681af77515750a11db37bcd4ed5ebe76 424 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 2 424 2.6E-152 T 09-03-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 RG43_RS12465 681af77515750a11db37bcd4ed5ebe76 424 SMART SM00363 358 419 3.5E-8 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 RG43_RS12465 681af77515750a11db37bcd4ed5ebe76 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 188 210 1.1E-32 T 09-03-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 RG43_RS12465 681af77515750a11db37bcd4ed5ebe76 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 1.1E-32 T 09-03-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 RG43_RS12465 681af77515750a11db37bcd4ed5ebe76 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 167 182 1.1E-32 T 09-03-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 RG43_RS12465 681af77515750a11db37bcd4ed5ebe76 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 221 233 1.1E-32 T 09-03-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 RG43_RS10765 3042fa1e674a5df82451c928d7650686 265 Pfam PF12833 Helix-turn-helix domain 184 261 7.4E-16 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS10765 3042fa1e674a5df82451c928d7650686 265 SUPERFAMILY SSF46689 213 262 2.99E-8 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS10765 3042fa1e674a5df82451c928d7650686 265 SMART SM00342 178 260 1.3E-25 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS10765 3042fa1e674a5df82451c928d7650686 265 Gene3D G3DSA:1.10.10.60 213 262 6.2E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS21890 e52680eab51dfab988f277965e0741b3 388 Pfam PF04471 Restriction endonuclease 243 359 3.9E-29 T 09-03-2017 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 RG43_RS21890 e52680eab51dfab988f277965e0741b3 388 Gene3D G3DSA:3.40.1350.10 239 363 2.4E-18 T 09-03-2017 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 Reactome: R-HSA-6784531 RG43_RS21890 e52680eab51dfab988f277965e0741b3 388 SUPERFAMILY SSF52980 247 362 5.36E-14 T 09-03-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 RG43_RS13220 a1a4f139fccdc536f1f729e63dfa7b4a 225 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 1 225 3.2E-125 T 09-03-2017 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 KEGG: 00910+1.7.99.4 RG43_RS13220 a1a4f139fccdc536f1f729e63dfa7b4a 225 Pfam PF02665 Nitrate reductase gamma subunit 5 224 2.7E-78 T 09-03-2017 IPR023234 NarG-like domain RG43_RS13220 a1a4f139fccdc536f1f729e63dfa7b4a 225 Gene3D G3DSA:1.20.950.20 2 216 2.4E-72 T 09-03-2017 RG43_RS13220 a1a4f139fccdc536f1f729e63dfa7b4a 225 SUPERFAMILY SSF103501 2 224 4.18E-71 T 09-03-2017 IPR023234 NarG-like domain RG43_RS01180 db885011d46d91b8651a954e01f487be 428 Gene3D G3DSA:1.10.3860.10 6 406 3.8E-120 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RG43_RS01180 db885011d46d91b8651a954e01f487be 428 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 2 428 39.237 T 09-03-2017 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 RG43_RS01180 db885011d46d91b8651a954e01f487be 428 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 295 318 - T 09-03-2017 IPR018107 Sodium:dicarboxylate symporter, conserved site RG43_RS01180 db885011d46d91b8651a954e01f487be 428 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 36 51 - T 09-03-2017 IPR018107 Sodium:dicarboxylate symporter, conserved site RG43_RS01180 db885011d46d91b8651a954e01f487be 428 SUPERFAMILY SSF118215 9 401 1.31E-121 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RG43_RS01180 db885011d46d91b8651a954e01f487be 428 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 1.1E-37 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RG43_RS01180 db885011d46d91b8651a954e01f487be 428 PRINTS PR00173 Glutamate-aspartate symporter signature 292 318 1.1E-37 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RG43_RS01180 db885011d46d91b8651a954e01f487be 428 PRINTS PR00173 Glutamate-aspartate symporter signature 145 167 1.1E-37 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RG43_RS01180 db885011d46d91b8651a954e01f487be 428 PRINTS PR00173 Glutamate-aspartate symporter signature 192 211 1.1E-37 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RG43_RS01180 db885011d46d91b8651a954e01f487be 428 PRINTS PR00173 Glutamate-aspartate symporter signature 44 64 1.1E-37 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RG43_RS01180 db885011d46d91b8651a954e01f487be 428 PRINTS PR00173 Glutamate-aspartate symporter signature 74 99 1.1E-37 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RG43_RS01180 db885011d46d91b8651a954e01f487be 428 PRINTS PR00173 Glutamate-aspartate symporter signature 327 346 1.1E-37 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RG43_RS01180 db885011d46d91b8651a954e01f487be 428 Pfam PF00375 Sodium:dicarboxylate symporter family 9 401 1.2E-114 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RG43_RS15610 aa6ba5102fff07eeaf9241d8f0506d7b 342 Gene3D G3DSA:3.40.50.2300 162 306 4.5E-28 T 09-03-2017 RG43_RS15610 aa6ba5102fff07eeaf9241d8f0506d7b 342 TIGRFAM TIGR02955 TMAO_TorT: TMAO reductase system periplasmic protein TorT 46 334 2.6E-131 T 09-03-2017 IPR014301 TMAO reductase system periplasmic, TorT RG43_RS15610 aa6ba5102fff07eeaf9241d8f0506d7b 342 Gene3D G3DSA:3.40.50.2300 45 161 7.1E-14 T 09-03-2017 RG43_RS15610 aa6ba5102fff07eeaf9241d8f0506d7b 342 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 44 337 1.8E-94 T 09-03-2017 IPR001761 Periplasmic binding protein/LacI sugar binding domain RG43_RS15610 aa6ba5102fff07eeaf9241d8f0506d7b 342 SUPERFAMILY SSF53822 45 302 1.27E-38 T 09-03-2017 IPR028082 Periplasmic binding protein-like I RG43_RS01120 2aaac8fdd53cb05ea51408b995112a04 559 TIGRFAM TIGR03368 cellulose_yhjU: cellulose synthase operon protein YhjU 23 557 1.3E-246 T 09-03-2017 IPR017744 Cellulose biosynthesis protein BcsG RG43_RS01120 2aaac8fdd53cb05ea51408b995112a04 559 Pfam PF11658 Cellulose biosynthesis protein BcsG 24 554 1.7E-236 T 09-03-2017 IPR017744 Cellulose biosynthesis protein BcsG RG43_RS24610 a21299ef6585d7f854fb501bd8b11cfd 477 Gene3D G3DSA:1.20.1250.20 34 215 3.1E-21 T 09-03-2017 RG43_RS24610 a21299ef6585d7f854fb501bd8b11cfd 477 Gene3D G3DSA:1.20.1250.20 274 459 3.4E-11 T 09-03-2017 RG43_RS24610 a21299ef6585d7f854fb501bd8b11cfd 477 Pfam PF00083 Sugar (and other) transporter 72 453 1.2E-29 T 09-03-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RG43_RS24610 a21299ef6585d7f854fb501bd8b11cfd 477 SUPERFAMILY SSF103473 30 464 3.92E-51 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS21835 52cdbaf8871c72ed57edfcea4909b7d8 287 Gene3D G3DSA:1.10.10.10 5 80 1.1E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS21835 52cdbaf8871c72ed57edfcea4909b7d8 287 SUPERFAMILY SSF53697 95 277 9.41E-36 T 09-03-2017 RG43_RS21835 52cdbaf8871c72ed57edfcea4909b7d8 287 SUPERFAMILY SSF46689 5 79 1.38E-16 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS21835 52cdbaf8871c72ed57edfcea4909b7d8 287 Pfam PF01418 Helix-turn-helix domain, rpiR family 9 79 6.4E-16 T 09-03-2017 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 RG43_RS21835 52cdbaf8871c72ed57edfcea4909b7d8 287 Gene3D G3DSA:3.40.50.10490 98 264 5.3E-31 T 09-03-2017 RG43_RS21835 52cdbaf8871c72ed57edfcea4909b7d8 287 Pfam PF01380 SIS domain 124 252 2.4E-18 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 RG43_RS01330 40c83b9e5253b13e2fe32bacaad0e13d 660 Gene3D G3DSA:2.40.170.20 148 660 3.9E-75 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RG43_RS01330 40c83b9e5253b13e2fe32bacaad0e13d 660 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 30 660 1.0E-176 T 09-03-2017 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 RG43_RS01330 40c83b9e5253b13e2fe32bacaad0e13d 660 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 30 660 3.4E-135 T 09-03-2017 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 RG43_RS01330 40c83b9e5253b13e2fe32bacaad0e13d 660 Pfam PF00593 TonB dependent receptor 413 658 1.4E-26 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RG43_RS01330 40c83b9e5253b13e2fe32bacaad0e13d 660 Gene3D G3DSA:2.170.130.10 30 147 5.8E-39 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RG43_RS01330 40c83b9e5253b13e2fe32bacaad0e13d 660 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 147 2.7E-25 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RG43_RS01330 40c83b9e5253b13e2fe32bacaad0e13d 660 SUPERFAMILY SSF56935 30 660 2.75E-102 T 09-03-2017 RG43_RS01330 40c83b9e5253b13e2fe32bacaad0e13d 660 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 37 - T 09-03-2017 IPR010916 TonB box, conserved site RG43_RS20280 fec0579378ead21311d011e2850cd191 356 Pfam PF01734 Patatin-like phospholipase 9 238 3.4E-20 T 09-03-2017 IPR002641 Patatin/Phospholipase A2-related GO:0006629 RG43_RS20280 fec0579378ead21311d011e2850cd191 356 SUPERFAMILY SSF52151 4 80 2.62E-33 T 09-03-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RG43_RS20280 fec0579378ead21311d011e2850cd191 356 SUPERFAMILY SSF52151 123 267 2.62E-33 T 09-03-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RG43_RS16015 c65db49a57e491c35a1ef60f0eb6d581 328 Gene3D G3DSA:3.40.50.1000 138 152 3.2E-4 T 09-03-2017 IPR023214 HAD-like domain RG43_RS16015 c65db49a57e491c35a1ef60f0eb6d581 328 Gene3D G3DSA:3.40.50.1000 239 286 3.2E-4 T 09-03-2017 IPR023214 HAD-like domain RG43_RS16015 c65db49a57e491c35a1ef60f0eb6d581 328 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 19 322 2.4E-124 T 09-03-2017 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 RG43_RS16015 c65db49a57e491c35a1ef60f0eb6d581 328 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 326 40.417 T 09-03-2017 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 RG43_RS16015 c65db49a57e491c35a1ef60f0eb6d581 328 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 13 319 3.1E-112 T 09-03-2017 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 RG43_RS16015 c65db49a57e491c35a1ef60f0eb6d581 328 Gene3D G3DSA:3.40.50.300 156 168 1.2E-7 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16015 c65db49a57e491c35a1ef60f0eb6d581 328 Gene3D G3DSA:3.40.50.300 45 108 1.2E-7 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16015 c65db49a57e491c35a1ef60f0eb6d581 328 SUPERFAMILY SSF52540 46 164 2.57E-12 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS19810 37d6efd20ee996072079a48557bfe59d 128 Pfam PF06894 Bacteriophage lambda tail assembly chaperone, TAC, protein G 1 117 1.5E-39 T 09-03-2017 IPR010027 Bacteriophage lambda, GpG, minor tail RG43_RS19810 37d6efd20ee996072079a48557bfe59d 128 TIGRFAM TIGR01674 phage_lambda_G: phage minor tail protein G 1 128 8.2E-57 T 09-03-2017 IPR010027 Bacteriophage lambda, GpG, minor tail RG43_RS17240 b5f663efae34c763a2b353e2e03db631 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 349 2.1E-183 T 09-03-2017 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 RG43_RS17240 b5f663efae34c763a2b353e2e03db631 350 PIRSF PIRSF001361 1 350 1.5E-167 T 09-03-2017 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 RG43_RS17240 b5f663efae34c763a2b353e2e03db631 350 Pfam PF00793 DAHP synthetase I family 38 338 2.7E-112 T 09-03-2017 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 RG43_RS17240 b5f663efae34c763a2b353e2e03db631 350 Gene3D G3DSA:3.20.20.70 9 349 2.0E-163 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS17240 b5f663efae34c763a2b353e2e03db631 350 SUPERFAMILY SSF51569 7 348 1.26E-140 T 09-03-2017 RG43_RS01495 8851cf20a9b6e4e9dc57f3f872e56668 254 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS01495 8851cf20a9b6e4e9dc57f3f872e56668 254 SUPERFAMILY SSF52540 16 243 1.67E-47 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS01495 8851cf20a9b6e4e9dc57f3f872e56668 254 SMART SM00382 28 218 4.4E-7 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS01495 8851cf20a9b6e4e9dc57f3f872e56668 254 Gene3D G3DSA:3.40.50.300 5 242 3.1E-56 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS01495 8851cf20a9b6e4e9dc57f3f872e56668 254 Pfam PF00005 ABC transporter 20 168 2.3E-22 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS01495 8851cf20a9b6e4e9dc57f3f872e56668 254 TIGRFAM TIGR02770 nickel_nikD: nickel import ATP-binding protein NikD 18 245 3.9E-106 T 09-03-2017 IPR014138 Nickel import ATP-binding protein NikD GO:0005886|GO:0015413|GO:0015675|GO:0016151 RG43_RS01530 afa4b644c622adbe38f60ca339173efe 185 Pfam PF08786 Domain of unknown function (DUF1795) 51 181 1.1E-29 T 09-03-2017 IPR014894 Protein DcrB RG43_RS01530 afa4b644c622adbe38f60ca339173efe 185 Gene3D G3DSA:3.40.1000.10 52 183 5.7E-4 T 09-03-2017 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich Reactome: R-HSA-5576892 RG43_RS16750 751127ffb86ac0755893027961d72aaf 329 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 20 31 - T 09-03-2017 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 RG43_RS16750 751127ffb86ac0755893027961d72aaf 329 SUPERFAMILY SSF102114 5 290 3.53E-72 T 09-03-2017 RG43_RS16750 751127ffb86ac0755893027961d72aaf 329 Pfam PF13353 4Fe-4S single cluster domain 23 125 3.3E-7 T 09-03-2017 RG43_RS16750 751127ffb86ac0755893027961d72aaf 329 Pfam PF04055 Radical SAM superfamily 19 181 2.7E-29 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 RG43_RS16750 751127ffb86ac0755893027961d72aaf 329 SMART SM00729 14 222 5.5E-7 T 09-03-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RG43_RS16750 751127ffb86ac0755893027961d72aaf 329 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 5 329 38.024 T 09-03-2017 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 RG43_RS16750 751127ffb86ac0755893027961d72aaf 329 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 5 329 2.5E-111 T 09-03-2017 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 RG43_RS16750 751127ffb86ac0755893027961d72aaf 329 Gene3D G3DSA:3.20.20.70 3 303 1.3E-73 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS16750 751127ffb86ac0755893027961d72aaf 329 Pfam PF06463 Molybdenum Cofactor Synthesis C 186 312 9.6E-40 T 09-03-2017 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 RG43_RS16115 f76b4ce31a6c6931a58fc323491e857b 814 Gene3D G3DSA:2.20.25.90 55 120 5.8E-18 T 09-03-2017 RG43_RS16115 f76b4ce31a6c6931a58fc323491e857b 814 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 14 814 0.0 T 09-03-2017 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 RG43_RS16115 f76b4ce31a6c6931a58fc323491e857b 814 Gene3D G3DSA:2.40.40.20 670 814 2.0E-59 T 09-03-2017 RG43_RS16115 f76b4ce31a6c6931a58fc323491e857b 814 Pfam PF01568 Molydopterin dinucleotide binding domain 695 806 5.0E-29 T 09-03-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RG43_RS16115 f76b4ce31a6c6931a58fc323491e857b 814 Gene3D G3DSA:3.40.50.740 411 654 2.5E-80 T 09-03-2017 RG43_RS16115 f76b4ce31a6c6931a58fc323491e857b 814 Gene3D G3DSA:3.40.50.740 121 206 2.5E-80 T 09-03-2017 RG43_RS16115 f76b4ce31a6c6931a58fc323491e857b 814 SUPERFAMILY SSF53706 57 697 2.62E-182 T 09-03-2017 RG43_RS16115 f76b4ce31a6c6931a58fc323491e857b 814 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 14 45 3.7E-4 T 09-03-2017 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RG43_RS16115 f76b4ce31a6c6931a58fc323491e857b 814 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 517 534 - T 09-03-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 RG43_RS16115 f76b4ce31a6c6931a58fc323491e857b 814 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 61 79 - T 09-03-2017 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 RG43_RS16115 f76b4ce31a6c6931a58fc323491e857b 814 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 56 116 1.0E-17 T 09-03-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS16115 f76b4ce31a6c6931a58fc323491e857b 814 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 731 758 - T 09-03-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 RG43_RS16115 f76b4ce31a6c6931a58fc323491e857b 814 SMART SM00926 56 116 1.8E-9 T 09-03-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS16115 f76b4ce31a6c6931a58fc323491e857b 814 Gene3D G3DSA:3.40.228.10 207 410 1.0E-75 T 09-03-2017 RG43_RS16115 f76b4ce31a6c6931a58fc323491e857b 814 Pfam PF00384 Molybdopterin oxidoreductase 119 576 1.5E-113 T 09-03-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS16115 f76b4ce31a6c6931a58fc323491e857b 814 SUPERFAMILY SSF50692 641 814 5.88E-42 T 09-03-2017 IPR009010 Aspartate decarboxylase-like domain RG43_RS16050 49c629425624e56066677a834e860e89 427 SUPERFAMILY SSF55205 1 423 1.5E-146 T 09-03-2017 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 RG43_RS16050 49c629425624e56066677a834e860e89 427 PIRSF PIRSF000505 1 427 8.4E-158 T 09-03-2017 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 RG43_RS16050 49c629425624e56066677a834e860e89 427 Gene3D G3DSA:3.65.10.10 22 237 2.3E-66 T 09-03-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 RG43_RS16050 49c629425624e56066677a834e860e89 427 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 424 5.5E-140 T 09-03-2017 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 RG43_RS16050 49c629425624e56066677a834e860e89 427 ProSitePatterns PS00885 EPSP synthase signature 2. 338 356 - T 09-03-2017 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 RG43_RS16050 49c629425624e56066677a834e860e89 427 Gene3D G3DSA:3.65.10.10 238 422 6.6E-74 T 09-03-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 RG43_RS16050 49c629425624e56066677a834e860e89 427 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 420 1.3E-154 T 09-03-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 RG43_RS16050 49c629425624e56066677a834e860e89 427 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 426 35.738 T 09-03-2017 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 RG43_RS16050 49c629425624e56066677a834e860e89 427 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 09-03-2017 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 RG43_RS09205 70e035becaca35b0101d7a06420dd380 153 Pfam PF06998 Protein of unknown function (DUF1307) 28 150 1.1E-41 T 09-03-2017 IPR009736 Protein of unknown function DUF1307 RG43_RS09205 70e035becaca35b0101d7a06420dd380 153 Gene3D G3DSA:3.30.1830.10 27 153 9.6E-46 T 09-03-2017 IPR009736 Protein of unknown function DUF1307 RG43_RS09205 70e035becaca35b0101d7a06420dd380 153 PIRSF PIRSF006187 1 153 4.0E-59 T 09-03-2017 IPR009736 Protein of unknown function DUF1307 RG43_RS09205 70e035becaca35b0101d7a06420dd380 153 SUPERFAMILY SSF160704 24 153 4.71E-40 T 09-03-2017 IPR009736 Protein of unknown function DUF1307 RG43_RS14170 ec654bea684d593746da27b5cc2c198e 59 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 32 52 5.0E-9 T 09-03-2017 IPR019626 Stress-induced protein, KGG, repeat RG43_RS14170 ec654bea684d593746da27b5cc2c198e 59 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 10 30 1.5E-9 T 09-03-2017 IPR019626 Stress-induced protein, KGG, repeat RG43_RS06510 1d9352accaccae804999034a4bcef7f1 714 Gene3D G3DSA:3.20.70.20 108 297 2.9E-57 T 09-03-2017 RG43_RS06510 1d9352accaccae804999034a4bcef7f1 714 Gene3D G3DSA:3.20.70.20 350 513 2.9E-57 T 09-03-2017 RG43_RS06510 1d9352accaccae804999034a4bcef7f1 714 Gene3D G3DSA:3.20.70.20 577 691 2.9E-57 T 09-03-2017 RG43_RS06510 1d9352accaccae804999034a4bcef7f1 714 SUPERFAMILY SSF51998 175 698 8.55E-186 T 09-03-2017 RG43_RS06510 1d9352accaccae804999034a4bcef7f1 714 SUPERFAMILY SSF48168 13 174 1.01E-63 T 09-03-2017 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RG43_RS06510 1d9352accaccae804999034a4bcef7f1 714 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 99 171 2.4E-12 T 09-03-2017 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RG43_RS06510 1d9352accaccae804999034a4bcef7f1 714 Pfam PF08343 Ribonucleotide reductase N-terminal 16 97 4.3E-29 T 09-03-2017 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RG43_RS06510 1d9352accaccae804999034a4bcef7f1 714 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 15 714 0.0 T 09-03-2017 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RG43_RS06510 1d9352accaccae804999034a4bcef7f1 714 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 566 588 - T 09-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RG43_RS06510 1d9352accaccae804999034a4bcef7f1 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 382 393 8.2E-34 T 09-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RG43_RS06510 1d9352accaccae804999034a4bcef7f1 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 465 487 8.2E-34 T 09-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RG43_RS06510 1d9352accaccae804999034a4bcef7f1 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 493 516 8.2E-34 T 09-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RG43_RS06510 1d9352accaccae804999034a4bcef7f1 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 426 449 8.2E-34 T 09-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RG43_RS06510 1d9352accaccae804999034a4bcef7f1 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 577 604 8.2E-34 T 09-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RG43_RS06510 1d9352accaccae804999034a4bcef7f1 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 251 270 8.2E-34 T 09-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RG43_RS06510 1d9352accaccae804999034a4bcef7f1 714 Pfam PF02867 Ribonucleotide reductase, barrel domain 176 693 1.7E-142 T 09-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RG43_RS06510 1d9352accaccae804999034a4bcef7f1 714 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 103 696 2.3E-158 T 09-03-2017 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RG43_RS09565 1d1343018740963d6a811269c8648137 248 SUPERFAMILY SSF53448 2 206 2.33E-27 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS09565 1d1343018740963d6a811269c8648137 248 Pfam PF00535 Glycosyl transferase family 2 4 99 1.9E-11 T 09-03-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RG43_RS09565 1d1343018740963d6a811269c8648137 248 Gene3D G3DSA:3.90.550.10 1 195 9.5E-22 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS09565 1d1343018740963d6a811269c8648137 248 TIGRFAM TIGR04009 wcaE: colanic acid biosynthesis glycosyltransferase WcaE 1 248 1.5E-154 T 09-03-2017 IPR024010 Colanic acid biosynthesis, glycosyl transferase, WcaE RG43_RS09610 4347a6336afa8fa1a2c06380bbb0aa50 492 Pfam PF13440 Polysaccharide biosynthesis protein 31 325 3.2E-67 T 09-03-2017 RG43_RS02025 7b82c04901be54ff2c9bd1b9cd489085 428 Gene3D G3DSA:3.30.70.1070 343 407 4.6E-5 T 09-03-2017 IPR007730 Sporulation-related domain GO:0042834 RG43_RS02025 7b82c04901be54ff2c9bd1b9cd489085 428 Hamap MF_02021 Cell division protein DamX [damX]. 1 428 25.175 T 09-03-2017 IPR032899 Cell division protein DamX GO:0030428|GO:0032506 RG43_RS02025 7b82c04901be54ff2c9bd1b9cd489085 428 Pfam PF05036 Sporulation related domain 345 417 1.3E-12 T 09-03-2017 IPR007730 Sporulation-related domain GO:0042834 RG43_RS02025 7b82c04901be54ff2c9bd1b9cd489085 428 SUPERFAMILY SSF110997 344 408 4.45E-7 T 09-03-2017 IPR007730 Sporulation-related domain GO:0042834 RG43_RS23195 10eef39b470182f5e2c6cdf8e5309789 683 Pfam PF04632 Fusaric acid resistance protein family 36 531 1.7E-30 T 09-03-2017 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 RG43_RS12785 e3e01eb4e172d82c6320c4c649b43c2b 404 SMART SM00922 128 259 6.6E-14 T 09-03-2017 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RG43_RS12785 e3e01eb4e172d82c6320c4c649b43c2b 404 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 85 110 - T 09-03-2017 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 RG43_RS12785 e3e01eb4e172d82c6320c4c649b43c2b 404 Gene3D G3DSA:3.30.390.10 1 119 5.5E-52 T 09-03-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RG43_RS12785 e3e01eb4e172d82c6320c4c649b43c2b 404 SUPERFAMILY SSF54826 1 112 8.06E-34 T 09-03-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RG43_RS12785 e3e01eb4e172d82c6320c4c649b43c2b 404 Pfam PF13378 Enolase C-terminal domain-like 194 379 4.0E-42 T 09-03-2017 IPR029065 Enolase C-terminal domain-like RG43_RS12785 e3e01eb4e172d82c6320c4c649b43c2b 404 SUPERFAMILY SSF51604 98 388 6.55E-79 T 09-03-2017 IPR029065 Enolase C-terminal domain-like RG43_RS12785 e3e01eb4e172d82c6320c4c649b43c2b 404 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 13 110 3.4E-35 T 09-03-2017 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain RG43_RS12785 e3e01eb4e172d82c6320c4c649b43c2b 404 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 209 240 - T 09-03-2017 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 RG43_RS12785 e3e01eb4e172d82c6320c4c649b43c2b 404 Gene3D G3DSA:3.20.20.120 120 367 1.7E-86 T 09-03-2017 IPR029065 Enolase C-terminal domain-like RG43_RS21320 ce7c49af8b85e648e2e76cb6d1771f09 159 Gene3D G3DSA:3.40.430.10 1 159 4.4E-59 T 09-03-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 RG43_RS21320 ce7c49af8b85e648e2e76cb6d1771f09 159 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 13 35 - T 09-03-2017 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-113510|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-69205 RG43_RS21320 ce7c49af8b85e648e2e76cb6d1771f09 159 PIRSF PIRSF000194 1 159 5.7E-57 T 09-03-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 RG43_RS21320 ce7c49af8b85e648e2e76cb6d1771f09 159 SUPERFAMILY SSF53597 1 159 1.07E-55 T 09-03-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 RG43_RS21320 ce7c49af8b85e648e2e76cb6d1771f09 159 PRINTS PR00070 Dihydrofolate reductase signature 27 35 8.5E-15 T 09-03-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 RG43_RS21320 ce7c49af8b85e648e2e76cb6d1771f09 159 PRINTS PR00070 Dihydrofolate reductase signature 90 104 8.5E-15 T 09-03-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 RG43_RS21320 ce7c49af8b85e648e2e76cb6d1771f09 159 PRINTS PR00070 Dihydrofolate reductase signature 40 51 8.5E-15 T 09-03-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 RG43_RS21320 ce7c49af8b85e648e2e76cb6d1771f09 159 PRINTS PR00070 Dihydrofolate reductase signature 13 23 8.5E-15 T 09-03-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 RG43_RS21320 ce7c49af8b85e648e2e76cb6d1771f09 159 Pfam PF00186 Dihydrofolate reductase 1 158 3.4E-58 T 09-03-2017 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 RG43_RS20610 00a782218a942c1a99d326d5dc7f41eb 161 Gene3D G3DSA:3.30.910.20 92 161 2.1E-35 T 09-03-2017 RG43_RS20610 00a782218a942c1a99d326d5dc7f41eb 161 Gene3D G3DSA:3.30.910.20 11 57 2.1E-35 T 09-03-2017 RG43_RS20610 00a782218a942c1a99d326d5dc7f41eb 161 Pfam PF03938 Outer membrane protein (OmpH-like) 9 159 1.5E-29 T 09-03-2017 IPR005632 Chaperone protein Skp GO:0051082 RG43_RS20610 00a782218a942c1a99d326d5dc7f41eb 161 SMART SM00935 10 161 2.4E-39 T 09-03-2017 IPR005632 Chaperone protein Skp GO:0051082 RG43_RS20610 00a782218a942c1a99d326d5dc7f41eb 161 SUPERFAMILY SSF111384 20 160 6.41E-32 T 09-03-2017 IPR024930 Skp domain RG43_RS20610 00a782218a942c1a99d326d5dc7f41eb 161 PIRSF PIRSF002094 1 161 1.0E-51 T 09-03-2017 IPR005632 Chaperone protein Skp GO:0051082 RG43_RS12255 45b221a7f65fe18aefeef1bec5704c51 78 PIRSF PIRSF002855 1 78 1.3E-28 T 09-03-2017 IPR016367 Murein-lipoprotein RG43_RS12255 45b221a7f65fe18aefeef1bec5704c51 78 Pfam PF04728 Lipoprotein leucine-zipper 26 78 7.9E-25 T 09-03-2017 IPR006817 Lipoprotein leucine-zipper GO:0019867 RG43_RS12255 45b221a7f65fe18aefeef1bec5704c51 78 SUPERFAMILY SSF58042 24 74 2.49E-23 T 09-03-2017 RG43_RS12255 45b221a7f65fe18aefeef1bec5704c51 78 Gene3D G3DSA:1.20.5.190 22 73 4.9E-25 T 09-03-2017 RG43_RS10295 6aa3022e7f7a21d873210aeca2a5d744 320 Pfam PF13730 Helix-turn-helix domain 25 71 1.5E-6 T 09-03-2017 RG43_RS10295 6aa3022e7f7a21d873210aeca2a5d744 320 Gene3D G3DSA:1.10.10.10 29 77 3.5E-4 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS14810 2a892c7ed4d2cc523872b3a872a47277 243 SMART SM00422 4 73 3.6E-29 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RG43_RS14810 2a892c7ed4d2cc523872b3a872a47277 243 Gene3D G3DSA:1.10.1660.10 4 87 1.3E-22 T 09-03-2017 RG43_RS14810 2a892c7ed4d2cc523872b3a872a47277 243 SUPERFAMILY SSF46955 3 89 1.01E-20 T 09-03-2017 IPR009061 Putative DNA-binding domain RG43_RS14810 2a892c7ed4d2cc523872b3a872a47277 243 Pfam PF13411 MerR HTH family regulatory protein 4 71 4.9E-19 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RG43_RS14810 2a892c7ed4d2cc523872b3a872a47277 243 ProSitePatterns PS00552 MerR-type HTH domain signature. 7 30 - T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RG43_RS14100 a74769af7f164c13eb0a075770b220a1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 9.8E-23 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS14100 a74769af7f164c13eb0a075770b220a1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 9.8E-23 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS14100 a74769af7f164c13eb0a075770b220a1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 9.8E-23 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS14100 a74769af7f164c13eb0a075770b220a1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 9.8E-23 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS14100 a74769af7f164c13eb0a075770b220a1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 9.8E-23 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS14100 a74769af7f164c13eb0a075770b220a1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 9.8E-23 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS14100 a74769af7f164c13eb0a075770b220a1 252 Pfam PF00106 short chain dehydrogenase 14 208 7.5E-55 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS14100 a74769af7f164c13eb0a075770b220a1 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RG43_RS14100 a74769af7f164c13eb0a075770b220a1 252 SUPERFAMILY SSF51735 10 243 2.57E-62 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS14100 a74769af7f164c13eb0a075770b220a1 252 Gene3D G3DSA:3.40.50.720 5 246 4.2E-68 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS14100 a74769af7f164c13eb0a075770b220a1 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 197 0.0017 T 09-03-2017 RG43_RS06970 6594f89b9b4f43bb75e4ab9d10c69c6d 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 349 358 - T 09-03-2017 IPR025944 Sigma-54 interaction domain, conserved site RG43_RS06970 6594f89b9b4f43bb75e4ab9d10c69c6d 444 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 222 237 - T 09-03-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RG43_RS06970 6594f89b9b4f43bb75e4ab9d10c69c6d 444 Pfam PF00072 Response regulator receiver domain 9 117 4.7E-30 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS06970 6594f89b9b4f43bb75e4ab9d10c69c6d 444 Gene3D G3DSA:1.10.8.60 309 385 7.7E-23 T 09-03-2017 RG43_RS06970 6594f89b9b4f43bb75e4ab9d10c69c6d 444 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 160 173 - T 09-03-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RG43_RS06970 6594f89b9b4f43bb75e4ab9d10c69c6d 444 Gene3D G3DSA:1.10.10.60 390 437 8.0E-8 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS06970 6594f89b9b4f43bb75e4ab9d10c69c6d 444 SUPERFAMILY SSF52540 136 380 1.66E-70 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS06970 6594f89b9b4f43bb75e4ab9d10c69c6d 444 SMART SM00382 156 299 7.4E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS06970 6594f89b9b4f43bb75e4ab9d10c69c6d 444 Gene3D G3DSA:3.40.50.2300 3 126 5.6E-37 T 09-03-2017 RG43_RS06970 6594f89b9b4f43bb75e4ab9d10c69c6d 444 SMART SM00448 6 117 3.8E-34 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS06970 6594f89b9b4f43bb75e4ab9d10c69c6d 444 Pfam PF00158 Sigma-54 interaction domain 136 302 1.3E-71 T 09-03-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RG43_RS06970 6594f89b9b4f43bb75e4ab9d10c69c6d 444 Gene3D G3DSA:3.40.50.300 134 307 4.3E-58 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS06970 6594f89b9b4f43bb75e4ab9d10c69c6d 444 SUPERFAMILY SSF52172 4 180 2.85E-43 T 09-03-2017 IPR011006 CheY-like superfamily RG43_RS06970 6594f89b9b4f43bb75e4ab9d10c69c6d 444 SUPERFAMILY SSF46689 387 437 3.17E-7 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS21985 406f2d7b241a9da8192f207ed5c15ab3 390 PIRSF PIRSF001238 8 389 9.0E-159 T 09-03-2017 IPR010229 Peptidase M38, beta-aspartyl dipeptidase GO:0008798 RG43_RS21985 406f2d7b241a9da8192f207ed5c15ab3 390 TIGRFAM TIGR01975 isoAsp_dipep: beta-aspartyl peptidase 9 388 6.6E-188 T 09-03-2017 IPR010229 Peptidase M38, beta-aspartyl dipeptidase GO:0008798 RG43_RS21985 406f2d7b241a9da8192f207ed5c15ab3 390 Pfam PF01979 Amidohydrolase family 264 374 3.1E-6 T 09-03-2017 IPR006680 Amidohydrolase-related GO:0016787 RG43_RS21985 406f2d7b241a9da8192f207ed5c15ab3 390 SUPERFAMILY SSF51338 346 388 8.64E-8 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RG43_RS21985 406f2d7b241a9da8192f207ed5c15ab3 390 SUPERFAMILY SSF51338 3 77 1.63E-18 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RG43_RS21985 406f2d7b241a9da8192f207ed5c15ab3 390 SUPERFAMILY SSF51556 63 346 3.01E-72 T 09-03-2017 IPR032466 Metal-dependent hydrolase RG43_RS21985 406f2d7b241a9da8192f207ed5c15ab3 390 Gene3D G3DSA:3.20.20.140 71 342 2.7E-126 T 09-03-2017 RG43_RS21985 406f2d7b241a9da8192f207ed5c15ab3 390 Gene3D G3DSA:2.30.40.10 10 70 2.7E-15 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RG43_RS08425 addc02e1ad616a84adc9c450b695e82b 305 Gene3D G3DSA:3.60.15.10 1 157 3.5E-84 T 09-03-2017 IPR001279 Metallo-beta-lactamase RG43_RS08425 addc02e1ad616a84adc9c450b695e82b 305 Gene3D G3DSA:3.60.15.10 196 305 3.5E-84 T 09-03-2017 IPR001279 Metallo-beta-lactamase RG43_RS08425 addc02e1ad616a84adc9c450b695e82b 305 SUPERFAMILY SSF56281 1 304 6.94E-88 T 09-03-2017 IPR001279 Metallo-beta-lactamase RG43_RS08425 addc02e1ad616a84adc9c450b695e82b 305 TIGRFAM TIGR02649 true_RNase_BN: ribonuclease BN 2 305 2.4E-206 T 09-03-2017 IPR013469 Ribonuclease BN GO:0016891|GO:0042779 RG43_RS08425 addc02e1ad616a84adc9c450b695e82b 305 Hamap MF_01818 Ribonuclease BN [rbn]. 1 305 40.165 T 09-03-2017 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 RG43_RS08425 addc02e1ad616a84adc9c450b695e82b 305 Pfam PF12706 Beta-lactamase superfamily domain 36 154 2.9E-9 T 09-03-2017 IPR001279 Metallo-beta-lactamase RG43_RS08425 addc02e1ad616a84adc9c450b695e82b 305 Pfam PF12706 Beta-lactamase superfamily domain 203 270 2.3E-6 T 09-03-2017 IPR001279 Metallo-beta-lactamase RG43_RS08425 addc02e1ad616a84adc9c450b695e82b 305 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 2 304 9.3E-104 T 09-03-2017 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 RG43_RS01320 a7a422cd9446116599d338598abd2c08 304 Gene3D G3DSA:3.40.50.1980 172 304 3.3E-26 T 09-03-2017 RG43_RS01320 a7a422cd9446116599d338598abd2c08 304 Gene3D G3DSA:3.40.50.1980 50 170 1.0E-30 T 09-03-2017 RG43_RS01320 a7a422cd9446116599d338598abd2c08 304 Pfam PF01497 Periplasmic binding protein 53 281 9.5E-33 T 09-03-2017 IPR002491 ABC transporter periplasmic binding domain GO:0005488 RG43_RS01320 a7a422cd9446116599d338598abd2c08 304 SUPERFAMILY SSF53807 50 304 3.89E-58 T 09-03-2017 RG43_RS05855 0898791abbc91e671cb48c247eb149ae 455 Pfam PF03315 Serine dehydratase beta chain 3 155 3.3E-56 T 09-03-2017 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 RG43_RS05855 0898791abbc91e671cb48c247eb149ae 455 Gene3D G3DSA:3.30.1330.90 10 158 3.5E-55 T 09-03-2017 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 RG43_RS05855 0898791abbc91e671cb48c247eb149ae 455 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 8.0E-223 T 09-03-2017 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 RG43_RS05855 0898791abbc91e671cb48c247eb149ae 455 SUPERFAMILY SSF143548 16 158 6.54E-46 T 09-03-2017 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 RG43_RS05855 0898791abbc91e671cb48c247eb149ae 455 Pfam PF03313 Serine dehydratase alpha chain 184 448 1.5E-96 T 09-03-2017 IPR005130 Serine dehydratase-like, alpha subunit RG43_RS01370 183fadd73dcbd5dc30fbd41a4be3fa18 98 SMART SM00418 8 88 2.0E-9 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RG43_RS01370 183fadd73dcbd5dc30fbd41a4be3fa18 98 SUPERFAMILY SSF46785 2 93 2.28E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS01370 183fadd73dcbd5dc30fbd41a4be3fa18 98 Gene3D G3DSA:1.10.10.10 1 94 1.5E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS01370 183fadd73dcbd5dc30fbd41a4be3fa18 98 Pfam PF12840 Helix-turn-helix domain 7 69 2.3E-15 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS21340 25c176104b8a298c5e47bbc96315ab21 95 PIRSF PIRSF036548 1 95 6.8E-39 T 09-03-2017 IPR012206 Ferredoxin-like, FixX GO:0005506 RG43_RS21340 25c176104b8a298c5e47bbc96315ab21 95 SUPERFAMILY SSF54862 40 90 2.99E-8 T 09-03-2017 RG43_RS21340 25c176104b8a298c5e47bbc96315ab21 95 Gene3D G3DSA:3.30.70.20 40 69 1.8E-5 T 09-03-2017 RG43_RS13055 59769aa2486ae3b4dbb06fb8e14a0783 304 Pfam PF09160 FimH, mannose binding 27 171 6.1E-64 T 09-03-2017 IPR015243 FimH, mannose-binding domain RG43_RS13055 59769aa2486ae3b4dbb06fb8e14a0783 304 Gene3D G3DSA:2.60.40.1090 23 182 1.3E-68 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS13055 59769aa2486ae3b4dbb06fb8e14a0783 304 SUPERFAMILY SSF49401 184 304 4.23E-23 T 09-03-2017 IPR008966 Adhesion domain RG43_RS13055 59769aa2486ae3b4dbb06fb8e14a0783 304 SUPERFAMILY SSF49401 25 182 9.94E-67 T 09-03-2017 IPR008966 Adhesion domain RG43_RS13055 59769aa2486ae3b4dbb06fb8e14a0783 304 Gene3D G3DSA:2.60.40.1090 183 304 2.1E-31 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS05785 fa83c00d7b05d17aeabadc1680d94e3b 147 Gene3D G3DSA:3.90.1010.10 4 146 8.0E-49 T 09-03-2017 RG43_RS05785 fa83c00d7b05d17aeabadc1680d94e3b 147 Pfam PF02657 Fe-S metabolism associated domain 23 140 2.2E-38 T 09-03-2017 IPR003808 Fe-S metabolism associated domain, SufE-like RG43_RS05785 fa83c00d7b05d17aeabadc1680d94e3b 147 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 7 144 2.0E-73 T 09-03-2017 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE RG43_RS05785 fa83c00d7b05d17aeabadc1680d94e3b 147 SUPERFAMILY SSF82649 3 146 6.8E-44 T 09-03-2017 RG43_RS09445 0a2690ffcaa2a1114d8c8708da0d2087 471 Hamap MF_01577 Putative multidrug resistance protein MdtD [mdtD]. 1 465 54.159 T 09-03-2017 IPR023721 Multidrug resistance protein MdtD, putative RG43_RS09445 0a2690ffcaa2a1114d8c8708da0d2087 471 SUPERFAMILY SSF103473 244 451 4.19E-60 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS09445 0a2690ffcaa2a1114d8c8708da0d2087 471 SUPERFAMILY SSF103473 8 194 4.19E-60 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS09445 0a2690ffcaa2a1114d8c8708da0d2087 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 135 159 4.0E-8 T 09-03-2017 RG43_RS09445 0a2690ffcaa2a1114d8c8708da0d2087 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 199 217 4.0E-8 T 09-03-2017 RG43_RS09445 0a2690ffcaa2a1114d8c8708da0d2087 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 105 125 4.0E-8 T 09-03-2017 RG43_RS09445 0a2690ffcaa2a1114d8c8708da0d2087 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 14 38 4.0E-8 T 09-03-2017 RG43_RS09445 0a2690ffcaa2a1114d8c8708da0d2087 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 396 415 4.0E-8 T 09-03-2017 RG43_RS09445 0a2690ffcaa2a1114d8c8708da0d2087 471 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 16 413 2.0E-70 T 09-03-2017 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 RG43_RS09445 0a2690ffcaa2a1114d8c8708da0d2087 471 Gene3D G3DSA:1.20.1250.20 257 460 5.9E-14 T 09-03-2017 RG43_RS09445 0a2690ffcaa2a1114d8c8708da0d2087 471 Gene3D G3DSA:1.20.1250.20 10 193 4.4E-31 T 09-03-2017 RG43_RS09445 0a2690ffcaa2a1114d8c8708da0d2087 471 Pfam PF07690 Major Facilitator Superfamily 15 405 2.4E-48 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS12025 9c93b82ee45dae218aa45ffed043c732 632 Gene3D G3DSA:1.25.40.20 392 609 1.3E-8 T 09-03-2017 IPR020683 Ankyrin repeat-containing domain RG43_RS12025 9c93b82ee45dae218aa45ffed043c732 632 Pfam PF07906 ShET2 enterotoxin, N-terminal region 122 396 9.7E-94 T 09-03-2017 IPR012927 ShET2 enterotoxin, N-terminal RG43_RS12025 9c93b82ee45dae218aa45ffed043c732 632 SUPERFAMILY SSF48403 363 608 9.32E-11 T 09-03-2017 IPR020683 Ankyrin repeat-containing domain RG43_RS05110 0e8ace3151ce7b57ba27f7848abaf722 237 SUPERFAMILY SSF52540 25 219 2.62E-28 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS05110 0e8ace3151ce7b57ba27f7848abaf722 237 Gene3D G3DSA:3.40.50.300 6 230 6.1E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS17410 2d7357f35ef951f8f9744f25d5213bb8 134 PIRSF PIRSF000178 1 134 2.4E-33 T 09-03-2017 RG43_RS17410 2d7357f35ef951f8f9744f25d5213bb8 134 SUPERFAMILY SSF81343 7 134 4.8E-37 T 09-03-2017 RG43_RS17410 2d7357f35ef951f8f9744f25d5213bb8 134 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 12 131 4.1E-40 T 09-03-2017 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 RG43_RS17410 2d7357f35ef951f8f9744f25d5213bb8 134 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 11 128 4.5E-31 T 09-03-2017 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 RG43_RS17410 2d7357f35ef951f8f9744f25d5213bb8 134 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 14 38 - T 09-03-2017 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 RG43_RS17410 2d7357f35ef951f8f9744f25d5213bb8 134 Gene3D G3DSA:1.20.1300.10 8 134 9.1E-44 T 09-03-2017 RG43_RS17410 2d7357f35ef951f8f9744f25d5213bb8 134 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 89 102 - T 09-03-2017 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 RG43_RS06330 2acb2ae8724c118bd2e6fdbffa29c19d 479 Pfam PF00753 Metallo-beta-lactamase superfamily 34 172 3.5E-11 T 09-03-2017 IPR001279 Metallo-beta-lactamase RG43_RS06330 2acb2ae8724c118bd2e6fdbffa29c19d 479 SMART SM00849 34 210 1.1E-28 T 09-03-2017 IPR001279 Metallo-beta-lactamase RG43_RS06330 2acb2ae8724c118bd2e6fdbffa29c19d 479 PIRSF PIRSF005243 1 399 4.2E-163 T 09-03-2017 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 RG43_RS06330 2acb2ae8724c118bd2e6fdbffa29c19d 479 Gene3D G3DSA:3.40.50.360 249 394 1.9E-51 T 09-03-2017 IPR029039 Flavoprotein-like domain RG43_RS06330 2acb2ae8724c118bd2e6fdbffa29c19d 479 SUPERFAMILY SSF52218 251 396 7.58E-35 T 09-03-2017 IPR029039 Flavoprotein-like domain RG43_RS06330 2acb2ae8724c118bd2e6fdbffa29c19d 479 PRINTS PR00163 Rubredoxin signature 425 441 5.8E-7 T 09-03-2017 IPR024935 Rubredoxin domain GO:0005506 RG43_RS06330 2acb2ae8724c118bd2e6fdbffa29c19d 479 PRINTS PR00163 Rubredoxin signature 455 471 5.8E-7 T 09-03-2017 IPR024935 Rubredoxin domain GO:0005506 RG43_RS06330 2acb2ae8724c118bd2e6fdbffa29c19d 479 Pfam PF00301 Rubredoxin 425 471 1.1E-20 T 09-03-2017 IPR024935 Rubredoxin domain GO:0005506 RG43_RS06330 2acb2ae8724c118bd2e6fdbffa29c19d 479 Hamap MF_01312 Anaerobic nitric oxide reductase flavorubredoxin [norV]. 1 475 93.781 T 09-03-2017 IPR023957 Anaerobic nitric oxide reductase flavorubredoxin GO:0005506|GO:0016966 RG43_RS06330 2acb2ae8724c118bd2e6fdbffa29c19d 479 SUPERFAMILY SSF56281 8 285 2.23E-51 T 09-03-2017 IPR001279 Metallo-beta-lactamase RG43_RS06330 2acb2ae8724c118bd2e6fdbffa29c19d 479 Gene3D G3DSA:3.60.15.10 4 246 6.4E-91 T 09-03-2017 IPR001279 Metallo-beta-lactamase RG43_RS06330 2acb2ae8724c118bd2e6fdbffa29c19d 479 Pfam PF00258 Flavodoxin 256 388 1.7E-12 T 09-03-2017 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 RG43_RS06330 2acb2ae8724c118bd2e6fdbffa29c19d 479 Gene3D G3DSA:2.20.28.10 425 473 6.8E-21 T 09-03-2017 IPR004039 Rubredoxin-type fold RG43_RS06330 2acb2ae8724c118bd2e6fdbffa29c19d 479 SUPERFAMILY SSF57802 425 474 4.04E-18 T 09-03-2017 RG43_RS03095 d43dc972946d05f1db67bc379ec6b4d6 541 SUPERFAMILY SSF53649 226 463 5.98E-22 T 09-03-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RG43_RS03095 d43dc972946d05f1db67bc379ec6b4d6 541 Gene3D G3DSA:3.40.720.10 226 462 3.7E-11 T 09-03-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RG43_RS03095 d43dc972946d05f1db67bc379ec6b4d6 541 Pfam PF00884 Sulfatase 224 462 4.2E-43 T 09-03-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RG43_RS07650 30f33c2d8de065a355696e4e16a20b30 85 SUPERFAMILY SSF55594 1 82 1.44E-27 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like RG43_RS07650 30f33c2d8de065a355696e4e16a20b30 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 09-03-2017 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site RG43_RS07650 30f33c2d8de065a355696e4e16a20b30 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 2.6E-31 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like RG43_RS07650 30f33c2d8de065a355696e4e16a20b30 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.5E-20 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like RG43_RS07650 30f33c2d8de065a355696e4e16a20b30 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.5E-20 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like RG43_RS07650 30f33c2d8de065a355696e4e16a20b30 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.5E-20 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like RG43_RS07650 30f33c2d8de065a355696e4e16a20b30 85 Gene3D G3DSA:3.30.1340.10 1 83 1.8E-33 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like RG43_RS07650 30f33c2d8de065a355696e4e16a20b30 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 7.6E-28 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like RG43_RS07650 30f33c2d8de065a355696e4e16a20b30 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 09-03-2017 IPR002114 Phosphotransferase system, HPr serine phosphorylation site RG43_RS14360 68e4c980d517808ca80ec4f367260864 301 ProSitePatterns PS01237 Uncharacterized protein family UPF0028 signature. 11 43 - T 09-03-2017 IPR001423 Lysophospholipase patatin, conserved site GO:0004622|GO:0046470 Reactome: R-HSA-6814848 RG43_RS14360 68e4c980d517808ca80ec4f367260864 301 Gene3D G3DSA:3.40.1090.10 8 170 2.8E-6 T 09-03-2017 RG43_RS14360 68e4c980d517808ca80ec4f367260864 301 SUPERFAMILY SSF52151 1 295 2.79E-57 T 09-03-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RG43_RS14360 68e4c980d517808ca80ec4f367260864 301 Pfam PF01734 Patatin-like phospholipase 8 165 7.2E-24 T 09-03-2017 IPR002641 Patatin/Phospholipase A2-related GO:0006629 RG43_RS24090 b192fd4ef412955d7af42c8030bc0d58 732 SMART SM00490 492 589 5.3E-10 T 09-03-2017 IPR001650 Helicase, C-terminal RG43_RS24090 b192fd4ef412955d7af42c8030bc0d58 732 Gene3D G3DSA:3.40.50.300 198 380 7.5E-39 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS24090 b192fd4ef412955d7af42c8030bc0d58 732 SUPERFAMILY SSF52540 214 440 1.8E-41 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS24090 b192fd4ef412955d7af42c8030bc0d58 732 SUPERFAMILY SSF52540 503 601 1.8E-41 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS24090 b192fd4ef412955d7af42c8030bc0d58 732 SMART SM00487 195 391 3.2E-20 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain RG43_RS24090 b192fd4ef412955d7af42c8030bc0d58 732 Gene3D G3DSA:3.40.50.300 456 632 1.5E-28 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS24090 b192fd4ef412955d7af42c8030bc0d58 732 TIGRFAM TIGR00595 priA: primosomal protein N' 221 730 1.0E-219 T 09-03-2017 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 RG43_RS24090 b192fd4ef412955d7af42c8030bc0d58 732 Pfam PF00270 DEAD/DEAH box helicase 203 362 6.2E-16 T 09-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RG43_RS24090 b192fd4ef412955d7af42c8030bc0d58 732 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 732 26.224 T 09-03-2017 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 RG43_RS24090 b192fd4ef412955d7af42c8030bc0d58 732 Pfam PF00271 Helicase conserved C-terminal domain 521 589 1.4E-5 T 09-03-2017 IPR001650 Helicase, C-terminal RG43_RS21700 cee5b5fbc189b7414e992e08cb026cee 357 Gene3D G3DSA:3.40.1090.10 27 196 6.1E-7 T 09-03-2017 RG43_RS21700 cee5b5fbc189b7414e992e08cb026cee 357 Pfam PF01734 Patatin-like phospholipase 27 195 4.3E-21 T 09-03-2017 IPR002641 Patatin/Phospholipase A2-related GO:0006629 RG43_RS21700 cee5b5fbc189b7414e992e08cb026cee 357 SUPERFAMILY SSF52151 21 279 2.25E-43 T 09-03-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RG43_RS13660 93dd5dacfaf277696a07ecba0152a9bf 311 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 10 271 57.866 T 09-03-2017 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 Reactome: R-HSA-6782315 RG43_RS13660 93dd5dacfaf277696a07ecba0152a9bf 311 SUPERFAMILY SSF52402 17 235 1.05E-53 T 09-03-2017 RG43_RS13660 93dd5dacfaf277696a07ecba0152a9bf 311 Pfam PF01171 PP-loop family 42 204 1.7E-13 T 09-03-2017 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 RG43_RS13660 93dd5dacfaf277696a07ecba0152a9bf 311 Gene3D G3DSA:3.40.50.620 23 206 3.3E-21 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS13660 93dd5dacfaf277696a07ecba0152a9bf 311 PIRSF PIRSF004976 2 273 1.5E-77 T 09-03-2017 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 Reactome: R-HSA-6782315 RG43_RS12380 9e5e4071a9d1b9e3765784083543f591 115 PIRSF PIRSF005894 1 108 1.0E-52 T 09-03-2017 IPR014434 Monothiol glutaredoxin RG43_RS12380 9e5e4071a9d1b9e3765784083543f591 115 Pfam PF00462 Glutaredoxin 17 81 1.7E-18 T 09-03-2017 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 RG43_RS12380 9e5e4071a9d1b9e3765784083543f591 115 Gene3D G3DSA:3.40.30.10 8 102 2.8E-32 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS12380 9e5e4071a9d1b9e3765784083543f591 115 SUPERFAMILY SSF52833 2 104 1.99E-35 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS12380 9e5e4071a9d1b9e3765784083543f591 115 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 5 101 4.7E-47 T 09-03-2017 IPR004480 Monothiol glutaredoxin-related RG43_RS23190 fcce0c27bc779a92eb5908f2341eb1b4 343 Gene3D G3DSA:2.40.50.100 208 241 3.0E-17 T 09-03-2017 RG43_RS23190 fcce0c27bc779a92eb5908f2341eb1b4 343 Gene3D G3DSA:2.40.50.100 48 81 3.0E-17 T 09-03-2017 RG43_RS23190 fcce0c27bc779a92eb5908f2341eb1b4 343 Pfam PF13533 Biotin-lipoyl like 49 96 1.2E-16 T 09-03-2017 RG43_RS23190 fcce0c27bc779a92eb5908f2341eb1b4 343 SUPERFAMILY SSF111369 182 297 1.7E-9 T 09-03-2017 RG43_RS23190 fcce0c27bc779a92eb5908f2341eb1b4 343 TIGRFAM TIGR00998 8a0101: efflux pump membrane protein 10 340 6.5E-126 T 09-03-2017 IPR005694 Efflux pump membrane protein Emr GO:0006855|GO:0015238 RG43_RS23190 fcce0c27bc779a92eb5908f2341eb1b4 343 Pfam PF13437 HlyD family secretion protein 210 293 1.6E-12 T 09-03-2017 RG43_RS23190 fcce0c27bc779a92eb5908f2341eb1b4 343 SUPERFAMILY SSF111369 45 102 6.93E-13 T 09-03-2017 RG43_RS22135 ba99a0a09550e6e6d7afdb67849573e3 339 SUPERFAMILY SSF50129 2 184 2.89E-44 T 09-03-2017 IPR011032 GroES-like RG43_RS22135 ba99a0a09550e6e6d7afdb67849573e3 339 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 09-03-2017 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 RG43_RS22135 ba99a0a09550e6e6d7afdb67849573e3 339 Gene3D G3DSA:3.40.50.720 189 289 7.4E-15 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS22135 ba99a0a09550e6e6d7afdb67849573e3 339 SUPERFAMILY SSF51735 142 305 7.62E-38 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS22135 ba99a0a09550e6e6d7afdb67849573e3 339 Gene3D G3DSA:3.90.180.10 3 188 3.2E-60 T 09-03-2017 IPR011032 GroES-like RG43_RS22135 ba99a0a09550e6e6d7afdb67849573e3 339 SMART SM00829 13 335 2.1E-6 T 09-03-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RG43_RS22135 ba99a0a09550e6e6d7afdb67849573e3 339 Pfam PF00107 Zinc-binding dehydrogenase 179 301 5.2E-22 T 09-03-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RG43_RS22135 ba99a0a09550e6e6d7afdb67849573e3 339 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 172 199 - T 09-03-2017 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RG43_RS22135 ba99a0a09550e6e6d7afdb67849573e3 339 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 137 2.3E-26 T 09-03-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RG43_RS17350 b9f03a52e78ffa0c5f3d4d4301c34388 379 PIRSF PIRSF000267 2 378 6.5E-137 T 09-03-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 RG43_RS17350 b9f03a52e78ffa0c5f3d4d4301c34388 379 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 362 7.5E-112 T 09-03-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 RG43_RS17350 b9f03a52e78ffa0c5f3d4d4301c34388 379 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 379 3.9E-210 T 09-03-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 RG43_RS12075 ef683e2f8e3892639d244af556c108a4 326 Pfam PF01032 FecCD transport family 22 323 6.0E-87 T 09-03-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 RG43_RS12075 ef683e2f8e3892639d244af556c108a4 326 SUPERFAMILY SSF81345 7 323 7.59E-85 T 09-03-2017 IPR029022 ABC transporter, BtuC-like RG43_RS12075 ef683e2f8e3892639d244af556c108a4 326 Gene3D G3DSA:1.10.3470.10 6 324 3.2E-102 T 09-03-2017 IPR029022 ABC transporter, BtuC-like RG43_RS12075 ef683e2f8e3892639d244af556c108a4 326 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 1 326 32.442 T 09-03-2017 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 RG43_RS04950 d2d848aa75c16d069c08c80aed775742 167 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 25 153 6.0E-29 T 09-03-2017 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component RG43_RS17190 096e580c7c161642efd9b5b72ae84e91 257 Pfam PF13531 Bacterial extracellular solute-binding protein 29 254 7.1E-51 T 09-03-2017 RG43_RS17190 096e580c7c161642efd9b5b72ae84e91 257 PIRSF PIRSF004846 1 257 2.1E-85 T 09-03-2017 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 RG43_RS17190 096e580c7c161642efd9b5b72ae84e91 257 Gene3D G3DSA:3.40.190.10 110 218 2.3E-45 T 09-03-2017 RG43_RS17190 096e580c7c161642efd9b5b72ae84e91 257 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 34 253 1.1E-88 T 09-03-2017 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 RG43_RS17190 096e580c7c161642efd9b5b72ae84e91 257 Gene3D G3DSA:3.40.190.10 28 109 5.6E-17 T 09-03-2017 RG43_RS17190 096e580c7c161642efd9b5b72ae84e91 257 Gene3D G3DSA:3.40.190.10 219 255 5.6E-17 T 09-03-2017 RG43_RS17190 096e580c7c161642efd9b5b72ae84e91 257 SUPERFAMILY SSF53850 28 255 7.06E-71 T 09-03-2017 RG43_RS24985 2ef8dae2082ae3650d2ffd19c7a7060f 340 Pfam PF12146 Serine aminopeptidase, S33 52 312 1.8E-57 T 09-03-2017 IPR022742 Serine aminopeptidase, S33 RG43_RS24985 2ef8dae2082ae3650d2ffd19c7a7060f 340 Gene3D G3DSA:3.40.50.1820 29 329 1.5E-28 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS24985 2ef8dae2082ae3650d2ffd19c7a7060f 340 SUPERFAMILY SSF53474 17 329 2.73E-33 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS05100 b1eec68f1f5a0e012ae83f49e3457022 321 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 321 9.3E-176 T 09-03-2017 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 RG43_RS05100 b1eec68f1f5a0e012ae83f49e3457022 321 Gene3D G3DSA:3.30.540.10 171 321 3.4E-36 T 09-03-2017 RG43_RS05100 b1eec68f1f5a0e012ae83f49e3457022 321 Gene3D G3DSA:3.30.540.10 4 170 1.4E-60 T 09-03-2017 RG43_RS05100 b1eec68f1f5a0e012ae83f49e3457022 321 PIRSF PIRSF004532 1 321 1.0E-134 T 09-03-2017 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 RG43_RS05100 b1eec68f1f5a0e012ae83f49e3457022 321 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 4 321 1.1E-120 T 09-03-2017 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 RG43_RS05100 b1eec68f1f5a0e012ae83f49e3457022 321 SUPERFAMILY SSF56655 2 321 1.59E-99 T 09-03-2017 RG43_RS25550 55cab95e7a52924b310070dbca85962c 538 Pfam PF02264 LamB porin 127 538 2.8E-83 T 09-03-2017 IPR003192 Porin, LamB type GO:0006810|GO:0016020 RG43_RS25550 55cab95e7a52924b310070dbca85962c 538 Pfam PF11471 Maltoporin periplasmic N-terminal extension 3 57 9.0E-15 T 09-03-2017 IPR021570 LamB-type porin N-terminal domain RG43_RS25550 55cab95e7a52924b310070dbca85962c 538 Gene3D G3DSA:2.40.170.10 125 538 1.5E-116 T 09-03-2017 IPR003192 Porin, LamB type GO:0006810|GO:0016020 RG43_RS25550 55cab95e7a52924b310070dbca85962c 538 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 132 533 0.0 T 09-03-2017 IPR003192 Porin, LamB type GO:0006810|GO:0016020 RG43_RS25550 55cab95e7a52924b310070dbca85962c 538 SUPERFAMILY SSF56935 125 538 2.01E-98 T 09-03-2017 RG43_RS23400 2571a8713ea76e34cd74edc2faee1cd4 331 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 8 329 53.1 T 09-03-2017 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 RG43_RS23400 2571a8713ea76e34cd74edc2faee1cd4 331 PIRSF PIRSF006621 3 327 1.0E-71 T 09-03-2017 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RG43_RS23400 2571a8713ea76e34cd74edc2faee1cd4 331 SUPERFAMILY SSF51395 13 321 4.07E-71 T 09-03-2017 RG43_RS23400 2571a8713ea76e34cd74edc2faee1cd4 331 Pfam PF01207 Dihydrouridine synthase (Dus) 16 325 2.3E-100 T 09-03-2017 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RG43_RS23400 2571a8713ea76e34cd74edc2faee1cd4 331 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 09-03-2017 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 RG43_RS23400 2571a8713ea76e34cd74edc2faee1cd4 331 Gene3D G3DSA:3.20.20.70 13 253 8.3E-75 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS23400 2571a8713ea76e34cd74edc2faee1cd4 331 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 13 328 4.6E-175 T 09-03-2017 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 RG43_RS22465 097260eeabd0aff7a7b0c7acf839941f 280 Gene3D G3DSA:3.20.20.150 11 277 5.0E-51 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain RG43_RS22465 097260eeabd0aff7a7b0c7acf839941f 280 SUPERFAMILY SSF51658 1 258 3.27E-51 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain RG43_RS22465 097260eeabd0aff7a7b0c7acf839941f 280 Pfam PF01261 Xylose isomerase-like TIM barrel 29 233 3.9E-26 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain RG43_RS15295 153a143fd6ce37de98555a376599e43c 191 Gene3D G3DSA:2.40.128.110 22 190 4.7E-63 T 09-03-2017 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RG43_RS15295 153a143fd6ce37de98555a376599e43c 191 SMART SM00867 24 188 7.0E-75 T 09-03-2017 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RG43_RS15295 153a143fd6ce37de98555a376599e43c 191 Pfam PF04264 YceI-like domain 25 186 9.9E-44 T 09-03-2017 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RG43_RS15295 153a143fd6ce37de98555a376599e43c 191 SUPERFAMILY SSF101874 22 190 4.97E-58 T 09-03-2017 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RG43_RS15295 153a143fd6ce37de98555a376599e43c 191 Hamap MF_00780 Protein YceI [yceI]. 1 191 49.19 T 09-03-2017 IPR023480 Uncharacterised protein family UPF0312/YceI RG43_RS04985 be115250d0d7f9cff7417c87270ba6c8 326 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 190 204 - T 09-03-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RG43_RS04985 be115250d0d7f9cff7417c87270ba6c8 326 Pfam PF00437 Type II/IV secretion system protein 74 259 7.4E-42 T 09-03-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RG43_RS04985 be115250d0d7f9cff7417c87270ba6c8 326 SMART SM00382 119 271 4.9E-5 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS04985 be115250d0d7f9cff7417c87270ba6c8 326 SUPERFAMILY SSF52540 4 325 2.23E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS04985 be115250d0d7f9cff7417c87270ba6c8 326 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 2 326 4.9E-142 T 09-03-2017 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 RG43_RS04985 be115250d0d7f9cff7417c87270ba6c8 326 Gene3D G3DSA:3.40.50.300 97 325 2.3E-61 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS03000 6aabd3668686f925d297c6ca23963729 211 PIRSF PIRSF004649 1 211 5.4E-64 T 09-03-2017 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC RG43_RS03000 6aabd3668686f925d297c6ca23963729 211 Gene3D G3DSA:3.10.450.50 26 70 4.8E-18 T 09-03-2017 IPR032710 NTF2-like domain RG43_RS03000 6aabd3668686f925d297c6ca23963729 211 Gene3D G3DSA:3.10.450.50 114 172 4.8E-18 T 09-03-2017 IPR032710 NTF2-like domain RG43_RS03000 6aabd3668686f925d297c6ca23963729 211 Gene3D G3DSA:1.10.10.640 71 111 1.2E-21 T 09-03-2017 IPR023094 Toluene tolerance protein, alpha-helical RG43_RS03000 6aabd3668686f925d297c6ca23963729 211 Gene3D G3DSA:1.10.10.640 173 203 1.2E-21 T 09-03-2017 IPR023094 Toluene tolerance protein, alpha-helical RG43_RS03000 6aabd3668686f925d297c6ca23963729 211 Pfam PF05494 MlaC protein 33 198 8.0E-54 T 09-03-2017 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC RG43_RS12365 d02140f644a9784282cd40fdfc56bab2 389 SUPERFAMILY SSF103473 6 379 2.88E-52 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS12365 d02140f644a9784282cd40fdfc56bab2 389 Pfam PF07690 Major Facilitator Superfamily 10 324 1.6E-30 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS12365 d02140f644a9784282cd40fdfc56bab2 389 Gene3D G3DSA:1.20.1250.20 6 192 5.3E-24 T 09-03-2017 RG43_RS12365 d02140f644a9784282cd40fdfc56bab2 389 Gene3D G3DSA:1.20.1250.20 200 380 1.2E-11 T 09-03-2017 RG43_RS23260 b7ff356d8fcb2c0199be8dbb4aa34dfb 478 Pfam PF02335 Cytochrome c552 43 472 3.9E-177 T 09-03-2017 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RG43_RS23260 b7ff356d8fcb2c0199be8dbb4aa34dfb 478 Gene3D G3DSA:1.20.140.10 313 445 1.8E-56 T 09-03-2017 RG43_RS23260 b7ff356d8fcb2c0199be8dbb4aa34dfb 478 Gene3D G3DSA:1.10.710.10 82 312 1.8E-18 T 09-03-2017 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RG43_RS23260 b7ff356d8fcb2c0199be8dbb4aa34dfb 478 TIGRFAM TIGR03152 cyto_c552_HCOOH: formate-dependent cytochrome c nitrite reductase, c552 subunit 38 475 3.8E-249 T 09-03-2017 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RG43_RS23260 b7ff356d8fcb2c0199be8dbb4aa34dfb 478 SUPERFAMILY SSF48695 38 472 2.4E-163 T 09-03-2017 IPR011031 Multihaem cytochrome RG43_RS23260 b7ff356d8fcb2c0199be8dbb4aa34dfb 478 PIRSF PIRSF000243 22 478 3.1E-126 T 09-03-2017 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RG43_RS23260 b7ff356d8fcb2c0199be8dbb4aa34dfb 478 Hamap MF_01182 Cytochrome c-552 [nrfA]. 1 477 59.288 T 09-03-2017 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RG43_RS20525 b527ea8c0ccf829240f2fb26525c38c3 274 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 65 155 8.4E-9 T 09-03-2017 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family RG43_RS20525 b527ea8c0ccf829240f2fb26525c38c3 274 Gene3D G3DSA:2.30.30.330 63 237 1.4E-24 T 09-03-2017 RG43_RS20525 b527ea8c0ccf829240f2fb26525c38c3 274 SUPERFAMILY SSF54001 64 160 3.92E-28 T 09-03-2017 RG43_RS20525 b527ea8c0ccf829240f2fb26525c38c3 274 SUPERFAMILY SSF54001 201 260 3.92E-28 T 09-03-2017 RG43_RS00625 6bf433ad824e5710e9d9ba7cae74ff7a 310 Gene3D G3DSA:3.40.50.720 2 171 1.7E-23 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS00625 6bf433ad824e5710e9d9ba7cae74ff7a 310 SUPERFAMILY SSF51735 1 306 3.69E-63 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS00625 6bf433ad824e5710e9d9ba7cae74ff7a 310 Gene3D G3DSA:3.90.25.10 172 291 5.3E-37 T 09-03-2017 RG43_RS00625 6bf433ad824e5710e9d9ba7cae74ff7a 310 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 236 9.8E-47 T 09-03-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RG43_RS00625 6bf433ad824e5710e9d9ba7cae74ff7a 310 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 309 58.71 T 09-03-2017 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 RG43_RS00625 6bf433ad824e5710e9d9ba7cae74ff7a 310 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 308 5.0E-138 T 09-03-2017 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 RG43_RS01655 d06fa1ec04351e12fd74c1c278faf31f 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 276 1.9E-22 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS01655 d06fa1ec04351e12fd74c1c278faf31f 281 SUPERFAMILY SSF161098 4 277 2.35E-56 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS01655 d06fa1ec04351e12fd74c1c278faf31f 281 Gene3D G3DSA:1.10.3720.10 4 270 1.8E-51 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS02220 00bc8ba7a63c1b8b0b2f031a6c496b49 72 Gene3D G3DSA:1.20.5.300 2 52 2.3E-21 T 09-03-2017 RG43_RS02220 00bc8ba7a63c1b8b0b2f031a6c496b49 72 Hamap MF_00715 Protein SlyX [slyX]. 5 72 17.586 T 09-03-2017 IPR007236 SlyX RG43_RS02220 00bc8ba7a63c1b8b0b2f031a6c496b49 72 Pfam PF04102 SlyX 6 72 4.7E-24 T 09-03-2017 IPR007236 SlyX RG43_RS07550 aa29ab4cded2ed631aed99f1f2a2b899 299 Gene3D G3DSA:3.40.1500.10 3 299 5.9E-139 T 09-03-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 RG43_RS07550 aa29ab4cded2ed631aed99f1f2a2b899 299 Pfam PF01218 Coproporphyrinogen III oxidase 7 299 4.7E-134 T 09-03-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 RG43_RS07550 aa29ab4cded2ed631aed99f1f2a2b899 299 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 164 188 - T 09-03-2017 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 RG43_RS07550 aa29ab4cded2ed631aed99f1f2a2b899 299 PRINTS PR00073 Coprogen oxidase signature 123 145 1.4E-90 T 09-03-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 RG43_RS07550 aa29ab4cded2ed631aed99f1f2a2b899 299 PRINTS PR00073 Coprogen oxidase signature 160 189 1.4E-90 T 09-03-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 RG43_RS07550 aa29ab4cded2ed631aed99f1f2a2b899 299 PRINTS PR00073 Coprogen oxidase signature 260 286 1.4E-90 T 09-03-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 RG43_RS07550 aa29ab4cded2ed631aed99f1f2a2b899 299 PRINTS PR00073 Coprogen oxidase signature 29 45 1.4E-90 T 09-03-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 RG43_RS07550 aa29ab4cded2ed631aed99f1f2a2b899 299 PRINTS PR00073 Coprogen oxidase signature 232 259 1.4E-90 T 09-03-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 RG43_RS07550 aa29ab4cded2ed631aed99f1f2a2b899 299 PRINTS PR00073 Coprogen oxidase signature 46 67 1.4E-90 T 09-03-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 RG43_RS07550 aa29ab4cded2ed631aed99f1f2a2b899 299 PRINTS PR00073 Coprogen oxidase signature 88 112 1.4E-90 T 09-03-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 RG43_RS07550 aa29ab4cded2ed631aed99f1f2a2b899 299 PIRSF PIRSF000166 1 299 3.8E-130 T 09-03-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 RG43_RS07550 aa29ab4cded2ed631aed99f1f2a2b899 299 SUPERFAMILY SSF102886 3 299 1.96E-139 T 09-03-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 RG43_RS07550 aa29ab4cded2ed631aed99f1f2a2b899 299 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 2 275 59.476 T 09-03-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 RG43_RS19760 22f301dc6f51d85ee16588a93c4be3a8 194 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 72 191 4.8E-39 T 09-03-2017 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly RG43_RS08525 56728de3ed1c99e3e9e7ae69fa1c64c4 400 PIRSF PIRSF006728 1 384 4.8E-114 T 09-03-2017 IPR008135 Competence-induced protein CinA RG43_RS08525 56728de3ed1c99e3e9e7ae69fa1c64c4 400 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 2 167 2.1E-38 T 09-03-2017 IPR001453 MoaB/Mog domain RG43_RS08525 56728de3ed1c99e3e9e7ae69fa1c64c4 400 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 400 118.593 T 09-03-2017 IPR008135 Competence-induced protein CinA RG43_RS08525 56728de3ed1c99e3e9e7ae69fa1c64c4 400 Pfam PF00994 Probable molybdopterin binding domain 6 170 5.0E-31 T 09-03-2017 IPR001453 MoaB/Mog domain RG43_RS08525 56728de3ed1c99e3e9e7ae69fa1c64c4 400 Gene3D G3DSA:3.40.980.10 2 202 1.6E-28 T 09-03-2017 IPR001453 MoaB/Mog domain RG43_RS08525 56728de3ed1c99e3e9e7ae69fa1c64c4 400 SUPERFAMILY SSF53218 2 204 1.44E-35 T 09-03-2017 IPR001453 MoaB/Mog domain RG43_RS08525 56728de3ed1c99e3e9e7ae69fa1c64c4 400 SMART SM00852 5 172 2.1E-35 T 09-03-2017 IPR001453 MoaB/Mog domain RG43_RS08525 56728de3ed1c99e3e9e7ae69fa1c64c4 400 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 399 3.1E-192 T 09-03-2017 IPR008135 Competence-induced protein CinA RG43_RS20825 72189ba43e029f2de5f5309bffc921f7 202 Gene3D G3DSA:2.60.40.1090 38 202 6.1E-11 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS20825 72189ba43e029f2de5f5309bffc921f7 202 Pfam PF00419 Fimbrial protein 41 201 1.0E-9 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS20825 72189ba43e029f2de5f5309bffc921f7 202 SUPERFAMILY SSF49401 44 202 4.23E-14 T 09-03-2017 IPR008966 Adhesion domain RG43_RS10515 aad5e28eb1c72e1ecb0eb2dfde466bd4 199 Gene3D G3DSA:2.40.160.20 28 199 8.4E-48 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RG43_RS10515 aad5e28eb1c72e1ecb0eb2dfde466bd4 199 ProSitePatterns PS00694 Enterobacterial virulence outer membrane protein signature 1. 50 58 - T 09-03-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 RG43_RS10515 aad5e28eb1c72e1ecb0eb2dfde466bd4 199 SUPERFAMILY SSF56925 30 199 1.26E-28 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RG43_RS10515 aad5e28eb1c72e1ecb0eb2dfde466bd4 199 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 191 199 - T 09-03-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 RG43_RS10515 aad5e28eb1c72e1ecb0eb2dfde466bd4 199 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 187 198 2.1E-28 T 09-03-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 RG43_RS10515 aad5e28eb1c72e1ecb0eb2dfde466bd4 199 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 96 119 2.1E-28 T 09-03-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 RG43_RS10515 aad5e28eb1c72e1ecb0eb2dfde466bd4 199 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 160 181 2.1E-28 T 09-03-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 RG43_RS10515 aad5e28eb1c72e1ecb0eb2dfde466bd4 199 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 49 61 2.1E-28 T 09-03-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 RG43_RS10515 aad5e28eb1c72e1ecb0eb2dfde466bd4 199 Pfam PF06316 Enterobacterial Ail/Lom protein 1 199 4.2E-125 T 09-03-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 RG43_RS12495 154319f9262673cf733d94b9a0e785bc 231 PIRSF PIRSF006102 1 219 1.9E-79 T 09-03-2017 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 RG43_RS12495 154319f9262673cf733d94b9a0e785bc 231 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 199 6.0E-62 T 09-03-2017 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 RG43_RS12495 154319f9262673cf733d94b9a0e785bc 231 Hamap MF_00478 Electron transport complex subunit RsxE [rsxE]. 1 210 27.355 T 09-03-2017 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 RG43_RS12495 154319f9262673cf733d94b9a0e785bc 231 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 7 208 4.9E-81 T 09-03-2017 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 RG43_RS18465 da53a0b3b0eca15cb69075798996cb4b 208 Gene3D G3DSA:3.40.50.1110 29 205 2.3E-56 T 09-03-2017 IPR013830 SGNH hydrolase-type esterase domain RG43_RS18465 da53a0b3b0eca15cb69075798996cb4b 208 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 30 40 - T 09-03-2017 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 RG43_RS18465 da53a0b3b0eca15cb69075798996cb4b 208 SUPERFAMILY SSF52266 29 204 1.96E-52 T 09-03-2017 IPR013830 SGNH hydrolase-type esterase domain RG43_RS18465 da53a0b3b0eca15cb69075798996cb4b 208 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 33 187 1.2E-25 T 09-03-2017 IPR013830 SGNH hydrolase-type esterase domain RG43_RS24870 4a887fae9ed64240cc88520962dfbd8c 209 Gene3D G3DSA:3.20.20.70 4 206 2.0E-65 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS24870 4a887fae9ed64240cc88520962dfbd8c 209 SUPERFAMILY SSF51569 3 202 1.43E-57 T 09-03-2017 RG43_RS24870 4a887fae9ed64240cc88520962dfbd8c 209 Pfam PF01081 KDPG and KHG aldolase 6 183 6.4E-31 T 09-03-2017 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 RG43_RS15670 d7d8480d41cfc1a2f3db54b71892c0a4 379 Gene3D G3DSA:3.30.1950.10 90 164 1.9E-32 T 09-03-2017 RG43_RS15670 d7d8480d41cfc1a2f3db54b71892c0a4 379 Pfam PF10531 SLBB domain 173 220 1.5E-8 T 09-03-2017 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS15670 d7d8480d41cfc1a2f3db54b71892c0a4 379 Pfam PF10531 SLBB domain 256 305 9.9E-5 T 09-03-2017 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS15670 d7d8480d41cfc1a2f3db54b71892c0a4 379 Gene3D G3DSA:3.10.560.10 245 344 1.7E-34 T 09-03-2017 RG43_RS15670 d7d8480d41cfc1a2f3db54b71892c0a4 379 Gene3D G3DSA:1.20.5.70 345 379 4.2E-19 T 09-03-2017 RG43_RS15670 d7d8480d41cfc1a2f3db54b71892c0a4 379 Pfam PF02563 Polysaccharide biosynthesis/export protein 81 165 3.4E-27 T 09-03-2017 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 RG43_RS15670 d7d8480d41cfc1a2f3db54b71892c0a4 379 Gene3D G3DSA:3.10.560.10 165 244 1.3E-28 T 09-03-2017 RG43_RS10510 76d6edcfdd5ee36f318d8fa53b3fc2df 1131 Pfam PF09327 Domain of unknown function (DUF1983) 846 925 7.3E-27 T 09-03-2017 IPR015406 Domain of unknown function DUF1983 RG43_RS10510 76d6edcfdd5ee36f318d8fa53b3fc2df 1131 SUPERFAMILY SSF49265 617 717 3.02E-6 T 09-03-2017 IPR003961 Fibronectin type III GO:0005515 RG43_RS10510 76d6edcfdd5ee36f318d8fa53b3fc2df 1131 Gene3D G3DSA:2.60.40.10 618 709 6.0E-5 T 09-03-2017 IPR013783 Immunoglobulin-like fold RG43_RS10510 76d6edcfdd5ee36f318d8fa53b3fc2df 1131 SMART SM00060 618 701 0.11 T 09-03-2017 IPR003961 Fibronectin type III GO:0005515 RG43_RS10510 76d6edcfdd5ee36f318d8fa53b3fc2df 1131 SMART SM00060 714 798 54.0 T 09-03-2017 IPR003961 Fibronectin type III GO:0005515 RG43_RS10510 76d6edcfdd5ee36f318d8fa53b3fc2df 1131 Pfam PF13550 Putative phage tail protein 330 497 1.1E-40 T 09-03-2017 IPR032876 Tip attachment protein J RG43_RS10510 76d6edcfdd5ee36f318d8fa53b3fc2df 1131 Pfam PF12421 Fibronectin type III protein 949 1089 7.2E-40 T 09-03-2017 IPR021034 Domain of unknown function, DUF3672 RG43_RS08490 e17b5bc13b8f095c6cf36c60eb831c6d 296 Gene3D G3DSA:3.20.20.370 82 267 1.2E-26 T 09-03-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 RG43_RS08490 e17b5bc13b8f095c6cf36c60eb831c6d 296 Gene3D G3DSA:3.20.20.370 13 38 1.2E-26 T 09-03-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 RG43_RS08490 e17b5bc13b8f095c6cf36c60eb831c6d 296 SUPERFAMILY SSF88713 85 267 1.2E-27 T 09-03-2017 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RG43_RS08490 e17b5bc13b8f095c6cf36c60eb831c6d 296 SUPERFAMILY SSF88713 14 41 1.2E-27 T 09-03-2017 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RG43_RS08490 e17b5bc13b8f095c6cf36c60eb831c6d 296 Pfam PF01522 Polysaccharide deacetylase 15 167 7.0E-13 T 09-03-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 RG43_RS08490 e17b5bc13b8f095c6cf36c60eb831c6d 296 Hamap MF_01870 Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD [arnD]. 1 292 61.424 T 09-03-2017 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable GO:0016811 RG43_RS08405 4e61f4990888ff483eea44f8c378b922 485 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 9 475 6.7E-150 T 09-03-2017 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 RG43_RS08405 4e61f4990888ff483eea44f8c378b922 485 Pfam PF00361 Proton-conducting membrane transporter 122 420 1.1E-91 T 09-03-2017 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08405 4e61f4990888ff483eea44f8c378b922 485 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 475 17.865 T 09-03-2017 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 RG43_RS03230 c0990e6f34e6bacb138fd96ccb372012 196 Hamap MF_01157 DnaA initiator-associating protein DiaA [diaA]. 1 196 62.808 T 09-03-2017 IPR023070 DnaA initiator-associating protein RG43_RS03230 c0990e6f34e6bacb138fd96ccb372012 196 Pfam PF13580 SIS domain 9 144 4.4E-33 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 RG43_RS03230 c0990e6f34e6bacb138fd96ccb372012 196 SUPERFAMILY SSF53697 2 191 1.27E-51 T 09-03-2017 RG43_RS03230 c0990e6f34e6bacb138fd96ccb372012 196 Gene3D G3DSA:3.40.50.10490 2 191 6.4E-56 T 09-03-2017 RG43_RS09625 03c8991a324cd1a9a0d9213da578d708 406 Pfam PF13439 Glycosyltransferase Family 4 15 210 1.5E-7 T 09-03-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 RG43_RS09625 03c8991a324cd1a9a0d9213da578d708 406 SUPERFAMILY SSF53756 14 82 3.26E-59 T 09-03-2017 RG43_RS09625 03c8991a324cd1a9a0d9213da578d708 406 SUPERFAMILY SSF53756 117 404 3.26E-59 T 09-03-2017 RG43_RS09625 03c8991a324cd1a9a0d9213da578d708 406 Gene3D G3DSA:3.40.50.2000 201 384 1.7E-24 T 09-03-2017 RG43_RS09625 03c8991a324cd1a9a0d9213da578d708 406 Pfam PF00534 Glycosyl transferases group 1 217 371 7.3E-39 T 09-03-2017 IPR001296 Glycosyl transferase, family 1 RG43_RS09625 03c8991a324cd1a9a0d9213da578d708 406 TIGRFAM TIGR04005 wcaL: colanic acid biosynthesis glycosyltransferase WcaL 1 406 1.1E-266 T 09-03-2017 IPR023884 Colanic acid biosynthesis, glycosyl transferase, WcaL RG43_RS02920 5f1096254c6bc95307cb06f7ec5b2bfd 242 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 8 233 43.957 T 09-03-2017 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 RG43_RS02920 5f1096254c6bc95307cb06f7ec5b2bfd 242 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 13 231 5.9E-87 T 09-03-2017 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 RG43_RS02920 5f1096254c6bc95307cb06f7ec5b2bfd 242 Gene3D G3DSA:1.10.3810.10 62 231 9.6E-62 T 09-03-2017 RG43_RS02920 5f1096254c6bc95307cb06f7ec5b2bfd 242 Pfam PF00912 Transglycosylase 60 227 5.4E-52 T 09-03-2017 IPR001264 Glycosyl transferase, family 51 RG43_RS02920 5f1096254c6bc95307cb06f7ec5b2bfd 242 SUPERFAMILY SSF53955 53 232 9.84E-63 T 09-03-2017 IPR023346 Lysozyme-like domain RG43_RS06610 d693b6eca751c54da0bd7de3aa2455b6 158 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 23 148 1.7E-31 T 09-03-2017 IPR005031 Coenzyme Q-binding protein COQ10, START domain RG43_RS06610 d693b6eca751c54da0bd7de3aa2455b6 158 SUPERFAMILY SSF55961 14 157 2.54E-34 T 09-03-2017 RG43_RS06610 d693b6eca751c54da0bd7de3aa2455b6 158 Gene3D G3DSA:3.30.530.20 14 155 7.0E-49 T 09-03-2017 IPR023393 START-like domain RG43_RS06040 166d79398dc297af7908df9964585539 50 Pfam PF01848 Hok/gef family 5 46 6.0E-19 T 09-03-2017 IPR000021 Hok/gef cell toxic protein GO:0016020 RG43_RS06040 166d79398dc297af7908df9964585539 50 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 1 49 6.0E-21 T 09-03-2017 IPR000021 Hok/gef cell toxic protein GO:0016020 RG43_RS06040 166d79398dc297af7908df9964585539 50 PRINTS PR00281 Hok/Gef cell toxic protein family signature 5 23 1.3E-10 T 09-03-2017 IPR000021 Hok/gef cell toxic protein GO:0016020 RG43_RS06040 166d79398dc297af7908df9964585539 50 PRINTS PR00281 Hok/Gef cell toxic protein family signature 25 47 1.3E-10 T 09-03-2017 IPR000021 Hok/gef cell toxic protein GO:0016020 RG43_RS23885 d615fc6e18308fe2d15811236c01b28f 614 Gene3D G3DSA:2.40.170.20 150 614 2.2E-97 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RG43_RS23885 d615fc6e18308fe2d15811236c01b28f 614 SUPERFAMILY SSF56935 26 614 3.91E-128 T 09-03-2017 RG43_RS23885 d615fc6e18308fe2d15811236c01b28f 614 TIGRFAM TIGR01779 TonB-B12: TonB-dependent vitamin B12 receptor 2 614 1.3E-263 T 09-03-2017 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 RG43_RS23885 d615fc6e18308fe2d15811236c01b28f 614 Gene3D G3DSA:2.170.130.10 29 149 1.0E-41 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RG43_RS23885 d615fc6e18308fe2d15811236c01b28f 614 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 2 614 35.062 T 09-03-2017 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 RG43_RS23885 d615fc6e18308fe2d15811236c01b28f 614 Pfam PF07715 TonB-dependent Receptor Plug Domain 40 146 8.2E-31 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RG43_RS23885 d615fc6e18308fe2d15811236c01b28f 614 Pfam PF00593 TonB dependent receptor 391 613 2.2E-32 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RG43_RS23885 d615fc6e18308fe2d15811236c01b28f 614 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 33 - T 09-03-2017 IPR010916 TonB box, conserved site RG43_RS23885 d615fc6e18308fe2d15811236c01b28f 614 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 597 614 - T 09-03-2017 IPR010917 TonB-dependent receptor, conserved site RG43_RS17230 b8e913ceb7aa05e04a4f16968c1a6a6a 346 PIRSF PIRSF005096 2 346 1.8E-128 T 09-03-2017 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 RG43_RS17230 b8e913ceb7aa05e04a4f16968c1a6a6a 346 Gene3D G3DSA:2.70.98.10 9 344 8.2E-117 T 09-03-2017 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 RG43_RS17230 b8e913ceb7aa05e04a4f16968c1a6a6a 346 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 12 343 1.9E-149 T 09-03-2017 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 RG43_RS17230 b8e913ceb7aa05e04a4f16968c1a6a6a 346 SUPERFAMILY SSF74650 5 343 1.57E-107 T 09-03-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 RG43_RS17230 b8e913ceb7aa05e04a4f16968c1a6a6a 346 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 171 180 - T 09-03-2017 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 RG43_RS17230 b8e913ceb7aa05e04a4f16968c1a6a6a 346 Pfam PF01263 Aldose 1-epimerase 17 342 1.5E-90 T 09-03-2017 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 RG43_RS02090 1b051d240650862a571f80dc50f7f44c 361 SUPERFAMILY SSF53383 38 352 1.06E-29 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS02090 1b051d240650862a571f80dc50f7f44c 361 Gene3D G3DSA:3.40.640.10 39 238 5.1E-21 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS02090 1b051d240650862a571f80dc50f7f44c 361 Pfam PF00155 Aminotransferase class I and II 54 232 2.0E-8 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RG43_RS11065 b069630143193bc825e4112905fc8139 349 Gene3D G3DSA:3.40.50.2300 2 108 6.4E-28 T 09-03-2017 RG43_RS11065 b069630143193bc825e4112905fc8139 349 SMART SM00448 4 119 8.4E-22 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS11065 b069630143193bc825e4112905fc8139 349 Pfam PF00072 Response regulator receiver domain 6 109 8.8E-25 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS11065 b069630143193bc825e4112905fc8139 349 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 342 41.369 T 09-03-2017 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 RG43_RS11065 b069630143193bc825e4112905fc8139 349 SUPERFAMILY SSF52738 156 342 8.11E-75 T 09-03-2017 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 RG43_RS11065 b069630143193bc825e4112905fc8139 349 Gene3D G3DSA:3.40.50.180 155 341 5.1E-84 T 09-03-2017 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 RG43_RS11065 b069630143193bc825e4112905fc8139 349 SUPERFAMILY SSF52172 1 108 1.01E-27 T 09-03-2017 IPR011006 CheY-like superfamily RG43_RS11065 b069630143193bc825e4112905fc8139 349 Pfam PF01339 CheB methylesterase 159 336 4.7E-62 T 09-03-2017 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 RG43_RS11065 b069630143193bc825e4112905fc8139 349 PIRSF PIRSF000876 1 346 2.5E-137 T 09-03-2017 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 RG43_RS19980 1fa69e4591127de5cd5f0a1b27915693 178 SUPERFAMILY SSF109604 1 173 1.1E-38 T 09-03-2017 RG43_RS19980 1fa69e4591127de5cd5f0a1b27915693 178 Gene3D G3DSA:1.10.3210.10 1 173 1.7E-50 T 09-03-2017 IPR006674 HD domain RG43_RS18070 47b98bb0f6f41f1b6cc02fee783d51c0 406 Pfam PF11922 Domain of unknown function (DUF3440) 352 384 7.5E-8 T 09-03-2017 IPR021845 Protein of unknown function DUF3440 RG43_RS18070 47b98bb0f6f41f1b6cc02fee783d51c0 406 Pfam PF11922 Domain of unknown function (DUF3440) 237 344 7.7E-27 T 09-03-2017 IPR021845 Protein of unknown function DUF3440 RG43_RS18070 47b98bb0f6f41f1b6cc02fee783d51c0 406 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 30 234 2.6E-15 T 09-03-2017 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 RG43_RS18070 47b98bb0f6f41f1b6cc02fee783d51c0 406 Gene3D G3DSA:3.40.50.620 14 235 1.2E-32 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS18070 47b98bb0f6f41f1b6cc02fee783d51c0 406 SUPERFAMILY SSF52402 13 231 1.82E-40 T 09-03-2017 RG43_RS01640 66e3ea07d1da36f4ca53be62088cfe9b 125 Pfam PF02661 Fic/DOC family 26 86 2.3E-7 T 09-03-2017 IPR003812 Fido domain RG43_RS01640 66e3ea07d1da36f4ca53be62088cfe9b 125 SUPERFAMILY SSF140931 6 93 4.05E-8 T 09-03-2017 IPR003812 Fido domain RG43_RS01640 66e3ea07d1da36f4ca53be62088cfe9b 125 TIGRFAM TIGR01550 DOC_P1: death-on-curing family protein 6 120 4.4E-24 T 09-03-2017 IPR006440 Death on curing protein GO:0016301 RG43_RS01640 66e3ea07d1da36f4ca53be62088cfe9b 125 Gene3D G3DSA:1.10.3290.10 31 94 2.3E-5 T 09-03-2017 IPR003812 Fido domain RG43_RS01640 66e3ea07d1da36f4ca53be62088cfe9b 125 PIRSF PIRSF018297 2 125 1.1E-31 T 09-03-2017 IPR006440 Death on curing protein GO:0016301 RG43_RS24665 353ce54225df99b48fd36e432ef18d03 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 2.2E-140 T 09-03-2017 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RG43_RS24665 353ce54225df99b48fd36e432ef18d03 469 Gene3D G3DSA:3.30.590.10 106 455 1.7E-140 T 09-03-2017 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 RG43_RS24665 353ce54225df99b48fd36e432ef18d03 469 SUPERFAMILY SSF54368 3 99 3.01E-36 T 09-03-2017 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RG43_RS24665 353ce54225df99b48fd36e432ef18d03 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 09-03-2017 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 RG43_RS24665 353ce54225df99b48fd36e432ef18d03 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 09-03-2017 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RG43_RS24665 353ce54225df99b48fd36e432ef18d03 469 SMART SM01230 102 379 8.7E-152 T 09-03-2017 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RG43_RS24665 353ce54225df99b48fd36e432ef18d03 469 SUPERFAMILY SSF55931 102 468 4.71E-139 T 09-03-2017 RG43_RS24665 353ce54225df99b48fd36e432ef18d03 469 Gene3D G3DSA:3.10.20.70 3 105 5.0E-40 T 09-03-2017 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RG43_RS24665 353ce54225df99b48fd36e432ef18d03 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 1.1E-220 T 09-03-2017 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RG43_RS24665 353ce54225df99b48fd36e432ef18d03 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 6.8E-32 T 09-03-2017 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RG43_RS24665 353ce54225df99b48fd36e432ef18d03 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 09-03-2017 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 RG43_RS24585 e0597917e9d119cfd9f41705c45f3e94 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 2.4E-77 T 09-03-2017 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 RG43_RS24585 e0597917e9d119cfd9f41705c45f3e94 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 143 7.6E-54 T 09-03-2017 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 RG43_RS24585 e0597917e9d119cfd9f41705c45f3e94 145 SUPERFAMILY SSF69500 1 144 4.05E-57 T 09-03-2017 IPR023509 D-Tyr tRNAtyr deacylase-like domain RG43_RS24585 e0597917e9d119cfd9f41705c45f3e94 145 Gene3D G3DSA:3.50.80.10 1 144 1.8E-57 T 09-03-2017 IPR023509 D-Tyr tRNAtyr deacylase-like domain RG43_RS24585 e0597917e9d119cfd9f41705c45f3e94 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 35.328 T 09-03-2017 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 RG43_RS21915 5e61adec259404de40a0e005989ba3e7 54 Pfam PF06568 Domain of unknown function (DUF1127) 18 54 1.2E-12 T 09-03-2017 IPR009506 Protein of unknown function DUF1127 RG43_RS13835 add297dffa34080fbb54fec910e626cc 280 Gene3D G3DSA:1.10.3720.10 4 266 5.1E-66 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS13835 add297dffa34080fbb54fec910e626cc 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 267 1.0E-16 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS13835 add297dffa34080fbb54fec910e626cc 280 SUPERFAMILY SSF161098 5 280 1.68E-70 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS14600 f27507ae5c911d5be756eca7ae9b0fd7 284 SUPERFAMILY SSF51690 121 276 1.1E-35 T 09-03-2017 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 RG43_RS14600 f27507ae5c911d5be756eca7ae9b0fd7 284 TIGRFAM TIGR01334 modD: modD protein 2 278 5.5E-152 T 09-03-2017 IPR006242 Putative pyrophosphorylase ModD GO:0016763 RG43_RS14600 f27507ae5c911d5be756eca7ae9b0fd7 284 Gene3D G3DSA:3.20.20.70 130 267 2.7E-35 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS14600 f27507ae5c911d5be756eca7ae9b0fd7 284 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 18 103 6.5E-20 T 09-03-2017 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 RG43_RS14600 f27507ae5c911d5be756eca7ae9b0fd7 284 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 111 276 2.2E-30 T 09-03-2017 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 RG43_RS14600 f27507ae5c911d5be756eca7ae9b0fd7 284 SUPERFAMILY SSF54675 2 105 7.85E-22 T 09-03-2017 RG43_RS14600 f27507ae5c911d5be756eca7ae9b0fd7 284 Gene3D G3DSA:3.90.1170.20 5 129 5.8E-28 T 09-03-2017 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 RG43_RS14600 f27507ae5c911d5be756eca7ae9b0fd7 284 PIRSF PIRSF006250 1 280 7.8E-67 T 09-03-2017 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 RG43_RS06535 e7a77fb9949b978c2ae344f32d06fa2d 149 Pfam PF06610 L-alanine exporter 4 141 1.7E-68 T 09-03-2017 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 RG43_RS06535 e7a77fb9949b978c2ae344f32d06fa2d 149 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 1 144 34.923 T 09-03-2017 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 RG43_RS06535 e7a77fb9949b978c2ae344f32d06fa2d 149 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 8 141 2.0E-73 T 09-03-2017 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 RG43_RS13540 7fcc8b2d285bc19cf8936dd15a4d0c89 201 SUPERFAMILY SSF52218 1 199 6.2E-59 T 09-03-2017 IPR029039 Flavoprotein-like domain RG43_RS13540 7fcc8b2d285bc19cf8936dd15a4d0c89 201 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 199 32.51 T 09-03-2017 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 RG43_RS13540 7fcc8b2d285bc19cf8936dd15a4d0c89 201 Pfam PF02525 Flavodoxin-like fold 3 195 8.9E-47 T 09-03-2017 IPR003680 Flavodoxin-like fold RG43_RS13540 7fcc8b2d285bc19cf8936dd15a4d0c89 201 Gene3D G3DSA:3.40.50.360 1 199 1.8E-67 T 09-03-2017 IPR029039 Flavoprotein-like domain RG43_RS10795 3ee66204766ce5067aac3c93ef2e04c6 77 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 10 34 - T 09-03-2017 IPR001455 TusA-like domain RG43_RS10795 3ee66204766ce5067aac3c93ef2e04c6 77 Pfam PF01206 Sulfurtransferase TusA 9 77 1.2E-19 T 09-03-2017 IPR001455 TusA-like domain RG43_RS10795 3ee66204766ce5067aac3c93ef2e04c6 77 SUPERFAMILY SSF64307 2 77 2.75E-24 T 09-03-2017 IPR001455 TusA-like domain RG43_RS10795 3ee66204766ce5067aac3c93ef2e04c6 77 Gene3D G3DSA:3.30.110.40 6 77 2.2E-33 T 09-03-2017 IPR001455 TusA-like domain RG43_RS21180 bf8f91dbe63dce60aaa706b5c37c195e 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 6 354 3.9E-172 T 09-03-2017 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 RG43_RS21180 bf8f91dbe63dce60aaa706b5c37c195e 363 Gene3D G3DSA:3.40.718.10 1 357 3.2E-130 T 09-03-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 RG43_RS21180 bf8f91dbe63dce60aaa706b5c37c195e 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 5 359 51.428 T 09-03-2017 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 RG43_RS21180 bf8f91dbe63dce60aaa706b5c37c195e 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 247 266 - T 09-03-2017 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 RG43_RS21180 bf8f91dbe63dce60aaa706b5c37c195e 363 SMART SM01329 6 355 9.6E-199 T 09-03-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 RG43_RS21180 bf8f91dbe63dce60aaa706b5c37c195e 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 355 2.4E-139 T 09-03-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 RG43_RS21180 bf8f91dbe63dce60aaa706b5c37c195e 363 SUPERFAMILY SSF53659 2 359 2.16E-121 T 09-03-2017 RG43_RS08570 0062f5d6b62aa6f6e3fc74bb26912446 452 Pfam PF07690 Major Facilitator Superfamily 34 400 9.6E-45 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS08570 0062f5d6b62aa6f6e3fc74bb26912446 452 PIRSF PIRSF002808 5 452 2.2E-178 T 09-03-2017 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 RG43_RS08570 0062f5d6b62aa6f6e3fc74bb26912446 452 SUPERFAMILY SSF103473 12 442 5.1E-85 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS08570 0062f5d6b62aa6f6e3fc74bb26912446 452 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 09-03-2017 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-3229133|Reactome: R-HSA-70153 RG43_RS08570 0062f5d6b62aa6f6e3fc74bb26912446 452 Gene3D G3DSA:1.20.1250.20 246 448 4.7E-48 T 09-03-2017 RG43_RS08570 0062f5d6b62aa6f6e3fc74bb26912446 452 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 417 2.8E-170 T 09-03-2017 RG43_RS08570 0062f5d6b62aa6f6e3fc74bb26912446 452 Gene3D G3DSA:1.20.1250.20 21 224 5.9E-55 T 09-03-2017 RG43_RS08570 0062f5d6b62aa6f6e3fc74bb26912446 452 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 440 8.6E-272 T 09-03-2017 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 RG43_RS04415 8e0e93ddc439f967567b2d547dfc8cd2 136 Pfam PF16549 Type II secretion system (T2SS) pilotin, S protein 21 132 7.6E-39 T 09-03-2017 IPR016502 Type II secretion system (T2SS) pilotin, S protein RG43_RS04415 8e0e93ddc439f967567b2d547dfc8cd2 136 PIRSF PIRSF007010 4 135 5.0E-47 T 09-03-2017 IPR016502 Type II secretion system (T2SS) pilotin, S protein RG43_RS26790 8e0e93ddc439f967567b2d547dfc8cd2 136 Pfam PF16549 Type II secretion system (T2SS) pilotin, S protein 21 132 7.6E-39 T 09-03-2017 IPR016502 Type II secretion system (T2SS) pilotin, S protein RG43_RS26790 8e0e93ddc439f967567b2d547dfc8cd2 136 PIRSF PIRSF007010 4 135 5.0E-47 T 09-03-2017 IPR016502 Type II secretion system (T2SS) pilotin, S protein RG43_RS23975 32228ddaaf08de94c62e1ce7bd3de2ae 113 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 5 85 1.3E-25 T 09-03-2017 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 RG43_RS23975 32228ddaaf08de94c62e1ce7bd3de2ae 113 Gene3D G3DSA:3.40.50.2300 3 99 1.3E-31 T 09-03-2017 RG43_RS23975 32228ddaaf08de94c62e1ce7bd3de2ae 113 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 94 2.0E-13 T 09-03-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RG43_RS23975 32228ddaaf08de94c62e1ce7bd3de2ae 113 SUPERFAMILY SSF52794 4 98 2.62E-27 T 09-03-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RG43_RS10630 c22a9d9ba002d137005c268d4fcea1ea 305 PIRSF PIRSF016660 3 305 1.2E-125 T 09-03-2017 IPR008526 Inner membrane protein YedI RG43_RS10630 c22a9d9ba002d137005c268d4fcea1ea 305 Pfam PF05661 Protein of unknown function (DUF808) 6 291 1.3E-113 T 09-03-2017 IPR008526 Inner membrane protein YedI RG43_RS11890 e338f743f41067124aaa520a4b7c8882 492 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 1 486 58.494 T 09-03-2017 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 RG43_RS11890 e338f743f41067124aaa520a4b7c8882 492 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 242 249 - T 09-03-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RG43_RS11890 e338f743f41067124aaa520a4b7c8882 492 Gene3D G3DSA:3.40.309.10 256 443 3.9E-41 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RG43_RS11890 e338f743f41067124aaa520a4b7c8882 492 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 3 486 2.9E-256 T 09-03-2017 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 RG43_RS11890 e338f743f41067124aaa520a4b7c8882 492 SUPERFAMILY SSF53720 3 455 3.27E-120 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RG43_RS11890 e338f743f41067124aaa520a4b7c8882 492 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 270 281 - T 09-03-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RG43_RS11890 e338f743f41067124aaa520a4b7c8882 492 Gene3D G3DSA:3.40.605.10 3 255 3.3E-74 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RG43_RS11890 e338f743f41067124aaa520a4b7c8882 492 Pfam PF00171 Aldehyde dehydrogenase family 9 457 2.1E-114 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RG43_RS25500 ef7077d2a570848dd1ede4122c8ae989 840 Pfam PF13953 PapC C-terminal domain 758 823 2.2E-18 T 09-03-2017 IPR025949 PapC-like, C-terminal domain RG43_RS25500 ef7077d2a570848dd1ede4122c8ae989 840 Pfam PF00577 Outer membrane usher protein 192 749 1.4E-184 T 09-03-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 RG43_RS25500 ef7077d2a570848dd1ede4122c8ae989 840 Pfam PF13954 PapC N-terminal domain 29 175 2.9E-42 T 09-03-2017 IPR025885 PapC, N-terminal domain GO:0005515 RG43_RS25500 ef7077d2a570848dd1ede4122c8ae989 840 SUPERFAMILY SSF141729 51 166 4.45E-30 T 09-03-2017 RG43_RS13715 d3c6945c5e2e125744d750c3b9a991a1 171 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 88 167 3.2E-35 T 09-03-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 RG43_RS13715 d3c6945c5e2e125744d750c3b9a991a1 171 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 4 169 40.228 T 09-03-2017 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 RG43_RS13715 d3c6945c5e2e125744d750c3b9a991a1 171 Gene3D G3DSA:1.10.10.10 86 168 4.0E-37 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS13715 d3c6945c5e2e125744d750c3b9a991a1 171 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 4 83 8.9E-20 T 09-03-2017 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 RG43_RS13715 d3c6945c5e2e125744d750c3b9a991a1 171 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 87 166 1.2E-38 T 09-03-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 RG43_RS13715 d3c6945c5e2e125744d750c3b9a991a1 171 SUPERFAMILY SSF53155 9 91 5.89E-6 T 09-03-2017 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 RG43_RS13715 d3c6945c5e2e125744d750c3b9a991a1 171 SUPERFAMILY SSF46767 86 169 8.5E-34 T 09-03-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 RG43_RS13715 d3c6945c5e2e125744d750c3b9a991a1 171 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 137 143 - T 09-03-2017 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 RG43_RS02695 36871dcfe1571efa43dd6a24b6f8caf0 156 SUPERFAMILY SSF51230 81 156 5.76E-26 T 09-03-2017 IPR011053 Single hybrid motif RG43_RS02695 36871dcfe1571efa43dd6a24b6f8caf0 156 Pfam PF00364 Biotin-requiring enzyme 83 155 9.0E-25 T 09-03-2017 IPR000089 Biotin/lipoyl attachment RG43_RS02695 36871dcfe1571efa43dd6a24b6f8caf0 156 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 112 129 - T 09-03-2017 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RG43_RS02695 36871dcfe1571efa43dd6a24b6f8caf0 156 Gene3D G3DSA:2.40.50.100 80 156 2.2E-32 T 09-03-2017 RG43_RS02695 36871dcfe1571efa43dd6a24b6f8caf0 156 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 156 1.4E-72 T 09-03-2017 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 RG43_RS02695 36871dcfe1571efa43dd6a24b6f8caf0 156 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 117 130 2.0E-18 T 09-03-2017 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 RG43_RS02695 36871dcfe1571efa43dd6a24b6f8caf0 156 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 85 98 2.0E-18 T 09-03-2017 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 RG43_RS02695 36871dcfe1571efa43dd6a24b6f8caf0 156 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 102 116 2.0E-18 T 09-03-2017 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 RG43_RS00830 864e132402a4844f90f279062b040e4f 286 TIGRFAM TIGR00542 hxl6Piso_put: putative hexulose-6-phosphate isomerase 2 286 2.0E-157 T 09-03-2017 IPR004560 L-ribulose-5-phosphate 3-epimerase GO:0005975|GO:0016861 KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961 RG43_RS00830 864e132402a4844f90f279062b040e4f 286 SUPERFAMILY SSF51658 14 277 1.44E-56 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain RG43_RS00830 864e132402a4844f90f279062b040e4f 286 Pfam PF01261 Xylose isomerase-like TIM barrel 25 234 5.6E-37 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain RG43_RS00830 864e132402a4844f90f279062b040e4f 286 Gene3D G3DSA:3.20.20.150 7 276 1.3E-52 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain RG43_RS05935 3a67f2560cdb35d17a6c926a2979a47e 263 TIGRFAM TIGR00444 mazG: MazG family protein 10 257 4.6E-125 T 09-03-2017 IPR011551 NTP pyrophosphohydrolase MazG RG43_RS05935 3a67f2560cdb35d17a6c926a2979a47e 263 Gene3D G3DSA:1.10.287.1080 19 73 6.0E-7 T 09-03-2017 RG43_RS05935 3a67f2560cdb35d17a6c926a2979a47e 263 Gene3D G3DSA:1.10.287.1080 131 222 3.0E-13 T 09-03-2017 RG43_RS05935 3a67f2560cdb35d17a6c926a2979a47e 263 SUPERFAMILY SSF101386 2 105 1.21E-26 T 09-03-2017 RG43_RS05935 3a67f2560cdb35d17a6c926a2979a47e 263 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 169 227 1.4E-7 T 09-03-2017 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core RG43_RS05935 3a67f2560cdb35d17a6c926a2979a47e 263 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 27 100 3.8E-28 T 09-03-2017 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core RG43_RS05935 3a67f2560cdb35d17a6c926a2979a47e 263 SUPERFAMILY SSF101386 136 236 5.23E-24 T 09-03-2017 RG43_RS14885 4d8851c875ae0927bbce7f7a4cfedb12 409 SUPERFAMILY SSF53187 322 406 1.94E-84 T 09-03-2017 RG43_RS14885 4d8851c875ae0927bbce7f7a4cfedb12 409 SUPERFAMILY SSF53187 1 209 1.94E-84 T 09-03-2017 RG43_RS14885 4d8851c875ae0927bbce7f7a4cfedb12 409 TIGRFAM TIGR01882 peptidase-T: peptidase T 2 406 8.8E-158 T 09-03-2017 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 RG43_RS14885 4d8851c875ae0927bbce7f7a4cfedb12 409 SUPERFAMILY SSF55031 208 320 2.62E-43 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain RG43_RS14885 4d8851c875ae0927bbce7f7a4cfedb12 409 Pfam PF01546 Peptidase family M20/M25/M40 139 402 9.4E-17 T 09-03-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RG43_RS14885 4d8851c875ae0927bbce7f7a4cfedb12 409 Gene3D G3DSA:3.40.630.10 322 407 2.5E-119 T 09-03-2017 RG43_RS14885 4d8851c875ae0927bbce7f7a4cfedb12 409 Gene3D G3DSA:3.40.630.10 1 208 2.5E-119 T 09-03-2017 RG43_RS14885 4d8851c875ae0927bbce7f7a4cfedb12 409 PIRSF PIRSF037215 1 408 1.4E-182 T 09-03-2017 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 RG43_RS14885 4d8851c875ae0927bbce7f7a4cfedb12 409 Pfam PF07687 Peptidase dimerisation domain 206 303 1.4E-11 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain RG43_RS14885 4d8851c875ae0927bbce7f7a4cfedb12 409 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 09-03-2017 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 RG43_RS14885 4d8851c875ae0927bbce7f7a4cfedb12 409 Hamap MF_00550 Peptidase T [pepT]. 1 404 56.59 T 09-03-2017 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 RG43_RS14885 4d8851c875ae0927bbce7f7a4cfedb12 409 Gene3D G3DSA:3.30.70.360 209 319 2.4E-44 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain RG43_RS14885 4d8851c875ae0927bbce7f7a4cfedb12 409 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 176 - T 09-03-2017 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 RG43_RS07745 1195d00a35f8e38c22b8789a1cbe3aa8 471 Gene3D G3DSA:3.90.800.10 69 180 1.1E-39 T 09-03-2017 RG43_RS07745 1195d00a35f8e38c22b8789a1cbe3aa8 471 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 09-03-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS07745 1195d00a35f8e38c22b8789a1cbe3aa8 471 Gene3D G3DSA:1.10.10.350 363 462 1.2E-31 T 09-03-2017 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 RG43_RS07745 1195d00a35f8e38c22b8789a1cbe3aa8 471 SUPERFAMILY SSF52374 3 298 4.56E-114 T 09-03-2017 RG43_RS07745 1195d00a35f8e38c22b8789a1cbe3aa8 471 Gene3D G3DSA:1.10.1160.10 233 314 1.2E-36 T 09-03-2017 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 RG43_RS07745 1195d00a35f8e38c22b8789a1cbe3aa8 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 5.9E-28 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 RG43_RS07745 1195d00a35f8e38c22b8789a1cbe3aa8 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 5.9E-28 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 RG43_RS07745 1195d00a35f8e38c22b8789a1cbe3aa8 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 5.9E-28 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 RG43_RS07745 1195d00a35f8e38c22b8789a1cbe3aa8 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 5.9E-28 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 RG43_RS07745 1195d00a35f8e38c22b8789a1cbe3aa8 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 5.9E-28 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 RG43_RS07745 1195d00a35f8e38c22b8789a1cbe3aa8 471 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 305 1.1E-124 T 09-03-2017 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 RG43_RS07745 1195d00a35f8e38c22b8789a1cbe3aa8 471 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 3 461 34.142 T 09-03-2017 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 RG43_RS07745 1195d00a35f8e38c22b8789a1cbe3aa8 471 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 463 2.1E-212 T 09-03-2017 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 RG43_RS07745 1195d00a35f8e38c22b8789a1cbe3aa8 471 Gene3D G3DSA:3.40.50.620 2 68 4.7E-54 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS07745 1195d00a35f8e38c22b8789a1cbe3aa8 471 Gene3D G3DSA:3.40.50.620 181 231 4.7E-54 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS07745 1195d00a35f8e38c22b8789a1cbe3aa8 471 SUPERFAMILY SSF48163 299 461 8.76E-46 T 09-03-2017 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 RG43_RS10305 cc509b43c8f32f000c871f4b452ede27 223 Pfam PF07789 Protein of unknown function (DUF1627) 58 212 1.4E-90 T 09-03-2017 IPR012432 Protein of unknown function DUF1627 RG43_RS13685 64dcd82ae7e0150cd28b34b57f1a041a 187 Pfam PF01713 Smr domain 89 169 2.8E-18 T 09-03-2017 IPR002625 Smr domain RG43_RS13685 64dcd82ae7e0150cd28b34b57f1a041a 187 SMART SM00463 85 169 2.3E-17 T 09-03-2017 IPR002625 Smr domain RG43_RS13685 64dcd82ae7e0150cd28b34b57f1a041a 187 SUPERFAMILY SSF160443 86 169 4.58E-12 T 09-03-2017 IPR002625 Smr domain RG43_RS26430 9358cd9f15f4530002d084a887a155f6 250 SMART SM00345 17 76 9.6E-14 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS26430 9358cd9f15f4530002d084a887a155f6 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 1.2E-7 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS26430 9358cd9f15f4530002d084a887a155f6 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 1.2E-7 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS26430 9358cd9f15f4530002d084a887a155f6 250 Pfam PF07702 UTRA domain 97 237 2.5E-24 T 09-03-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RG43_RS26430 9358cd9f15f4530002d084a887a155f6 250 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 76 2.2E-16 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS26430 9358cd9f15f4530002d084a887a155f6 250 SUPERFAMILY SSF64288 64 243 2.51E-35 T 09-03-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RG43_RS26430 9358cd9f15f4530002d084a887a155f6 250 SUPERFAMILY SSF46785 8 86 1.94E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS26430 9358cd9f15f4530002d084a887a155f6 250 SMART SM00866 96 238 1.0E-22 T 09-03-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RG43_RS26430 9358cd9f15f4530002d084a887a155f6 250 Gene3D G3DSA:3.40.1410.10 73 244 1.6E-37 T 09-03-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RG43_RS26430 9358cd9f15f4530002d084a887a155f6 250 Gene3D G3DSA:1.10.10.10 9 72 2.1E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS04055 9358cd9f15f4530002d084a887a155f6 250 SMART SM00345 17 76 9.6E-14 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS04055 9358cd9f15f4530002d084a887a155f6 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 1.2E-7 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS04055 9358cd9f15f4530002d084a887a155f6 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 1.2E-7 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS04055 9358cd9f15f4530002d084a887a155f6 250 Pfam PF07702 UTRA domain 97 237 2.5E-24 T 09-03-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RG43_RS04055 9358cd9f15f4530002d084a887a155f6 250 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 76 2.2E-16 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS04055 9358cd9f15f4530002d084a887a155f6 250 SUPERFAMILY SSF64288 64 243 2.51E-35 T 09-03-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RG43_RS04055 9358cd9f15f4530002d084a887a155f6 250 SUPERFAMILY SSF46785 8 86 1.94E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS04055 9358cd9f15f4530002d084a887a155f6 250 SMART SM00866 96 238 1.0E-22 T 09-03-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RG43_RS04055 9358cd9f15f4530002d084a887a155f6 250 Gene3D G3DSA:3.40.1410.10 73 244 1.6E-37 T 09-03-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RG43_RS04055 9358cd9f15f4530002d084a887a155f6 250 Gene3D G3DSA:1.10.10.10 9 72 2.1E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS14570 fdf526c397c0174254128e63033d99b5 565 PRINTS PR00744 Glycosyl hydrolase family 37 signature 191 209 9.0E-50 T 09-03-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 RG43_RS14570 fdf526c397c0174254128e63033d99b5 565 PRINTS PR00744 Glycosyl hydrolase family 37 signature 266 283 9.0E-50 T 09-03-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 RG43_RS14570 fdf526c397c0174254128e63033d99b5 565 PRINTS PR00744 Glycosyl hydrolase family 37 signature 332 349 9.0E-50 T 09-03-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 RG43_RS14570 fdf526c397c0174254128e63033d99b5 565 PRINTS PR00744 Glycosyl hydrolase family 37 signature 439 455 9.0E-50 T 09-03-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 RG43_RS14570 fdf526c397c0174254128e63033d99b5 565 PRINTS PR00744 Glycosyl hydrolase family 37 signature 375 391 9.0E-50 T 09-03-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 RG43_RS14570 fdf526c397c0174254128e63033d99b5 565 PRINTS PR00744 Glycosyl hydrolase family 37 signature 516 529 9.0E-50 T 09-03-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 RG43_RS14570 fdf526c397c0174254128e63033d99b5 565 PRINTS PR00744 Glycosyl hydrolase family 37 signature 300 317 9.0E-50 T 09-03-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 RG43_RS14570 fdf526c397c0174254128e63033d99b5 565 Hamap MF_01060 Periplasmic trehalase [treA]. 3 534 83.961 T 09-03-2017 IPR023720 Trehalase, periplasmic GO:0004555|GO:0005993|GO:0042597|GO:0071474 KEGG: 00500+3.2.1.28 RG43_RS14570 fdf526c397c0174254128e63033d99b5 565 ProSitePatterns PS00928 Trehalase signature 2. 446 455 - T 09-03-2017 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 RG43_RS14570 fdf526c397c0174254128e63033d99b5 565 Pfam PF01204 Trehalase 55 532 7.9E-177 T 09-03-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 RG43_RS14570 fdf526c397c0174254128e63033d99b5 565 SUPERFAMILY SSF48208 39 539 1.7E-174 T 09-03-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 RG43_RS14570 fdf526c397c0174254128e63033d99b5 565 ProSitePatterns PS00927 Trehalase signature 1. 149 162 - T 09-03-2017 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 RG43_RS01385 f664e3649807d5c66672086f071d822c 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 30 41 2.9E-26 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RG43_RS01385 f664e3649807d5c66672086f071d822c 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 43 58 2.9E-26 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RG43_RS01385 f664e3649807d5c66672086f071d822c 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 58 73 2.9E-26 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RG43_RS01385 f664e3649807d5c66672086f071d822c 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 2.9E-26 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RG43_RS01385 f664e3649807d5c66672086f071d822c 117 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 32 50 - T 09-03-2017 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 RG43_RS01385 f664e3649807d5c66672086f071d822c 117 SMART SM00418 8 86 4.0E-31 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RG43_RS01385 f664e3649807d5c66672086f071d822c 117 Pfam PF01022 Bacterial regulatory protein, arsR family 15 60 3.6E-17 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RG43_RS01385 f664e3649807d5c66672086f071d822c 117 SUPERFAMILY SSF46785 7 102 1.11E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS01385 f664e3649807d5c66672086f071d822c 117 Gene3D G3DSA:1.10.10.10 8 87 4.1E-29 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS01205 5ae9a916488bb61280800ab9a4087592 691 Pfam PF05170 AsmA family 6 587 3.2E-186 T 09-03-2017 IPR007844 AsmA RG43_RS08500 0099960130c6f896af1b5711b75274ca 322 Pfam PF00535 Glycosyl transferase family 2 11 171 8.6E-34 T 09-03-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RG43_RS08500 0099960130c6f896af1b5711b75274ca 322 Hamap MF_01164 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [arnC]. 2 322 61.008 T 09-03-2017 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase GO:0016780 KEGG: 00520+2.4.2.53 RG43_RS08500 0099960130c6f896af1b5711b75274ca 322 Gene3D G3DSA:3.90.550.10 8 147 3.5E-25 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS08500 0099960130c6f896af1b5711b75274ca 322 SUPERFAMILY SSF53448 8 230 1.69E-38 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS22160 1625658a253b5186be42c7ef744eb07e 503 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 350 357 - T 09-03-2017 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 RG43_RS22160 1625658a253b5186be42c7ef744eb07e 503 PRINTS PR00481 Cytosol aminopeptidase signature 287 308 6.0E-54 T 09-03-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RG43_RS22160 1625658a253b5186be42c7ef744eb07e 503 PRINTS PR00481 Cytosol aminopeptidase signature 374 389 6.0E-54 T 09-03-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RG43_RS22160 1625658a253b5186be42c7ef744eb07e 503 PRINTS PR00481 Cytosol aminopeptidase signature 324 345 6.0E-54 T 09-03-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RG43_RS22160 1625658a253b5186be42c7ef744eb07e 503 PRINTS PR00481 Cytosol aminopeptidase signature 346 366 6.0E-54 T 09-03-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RG43_RS22160 1625658a253b5186be42c7ef744eb07e 503 PRINTS PR00481 Cytosol aminopeptidase signature 265 282 6.0E-54 T 09-03-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RG43_RS22160 1625658a253b5186be42c7ef744eb07e 503 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 489 6.7E-120 T 09-03-2017 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 RG43_RS22160 1625658a253b5186be42c7ef744eb07e 503 Gene3D G3DSA:3.40.220.10 1 161 6.9E-66 T 09-03-2017 RG43_RS22160 1625658a253b5186be42c7ef744eb07e 503 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 4.1E-33 T 09-03-2017 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 RG43_RS22160 1625658a253b5186be42c7ef744eb07e 503 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 498 41.528 T 09-03-2017 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 RG43_RS22160 1625658a253b5186be42c7ef744eb07e 503 SUPERFAMILY SSF53187 180 496 5.65E-126 T 09-03-2017 RG43_RS22160 1625658a253b5186be42c7ef744eb07e 503 SUPERFAMILY SSF52949 1 184 1.82E-51 T 09-03-2017 RG43_RS22160 1625658a253b5186be42c7ef744eb07e 503 Gene3D G3DSA:3.40.630.10 171 496 1.6E-139 T 09-03-2017 RG43_RS19910 2933163cd3246066f10f9ff9ffe449ba 265 SMART SM01252 8 107 3.5E-40 T 09-03-2017 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding RG43_RS19910 2933163cd3246066f10f9ff9ffe449ba 265 Pfam PF04383 KilA-N domain 8 104 8.4E-24 T 09-03-2017 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding RG43_RS20735 cc50097b245098fa32ff05d39746678f 473 PRINTS PR00762 Chloride channel signature 387 403 3.1E-28 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 RG43_RS20735 cc50097b245098fa32ff05d39746678f 473 PRINTS PR00762 Chloride channel signature 183 202 3.1E-28 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 RG43_RS20735 cc50097b245098fa32ff05d39746678f 473 PRINTS PR00762 Chloride channel signature 102 119 3.1E-28 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 RG43_RS20735 cc50097b245098fa32ff05d39746678f 473 PRINTS PR00762 Chloride channel signature 405 424 3.1E-28 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 RG43_RS20735 cc50097b245098fa32ff05d39746678f 473 PRINTS PR00762 Chloride channel signature 352 372 3.1E-28 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 RG43_RS20735 cc50097b245098fa32ff05d39746678f 473 SUPERFAMILY SSF81340 15 453 1.96E-111 T 09-03-2017 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 RG43_RS20735 cc50097b245098fa32ff05d39746678f 473 Hamap MF_01128 H(+)/Cl(-) exchange transporter ClcA [clcA]. 3 469 47.995 T 09-03-2017 IPR023861 Chloride channel, ClcA GO:0005887|GO:0006821|GO:0015108 RG43_RS20735 cc50097b245098fa32ff05d39746678f 473 Pfam PF00654 Voltage gated chloride channel 89 437 3.4E-89 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 RG43_RS20735 cc50097b245098fa32ff05d39746678f 473 Gene3D G3DSA:1.10.3080.10 26 452 4.5E-101 T 09-03-2017 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 RG43_RS06845 f53411ee7b1451467bc206f0aa5f94dd 540 SUPERFAMILY SSF56425 238 353 2.24E-40 T 09-03-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 RG43_RS06845 f53411ee7b1451467bc206f0aa5f94dd 540 SUPERFAMILY SSF46977 425 522 1.14E-31 T 09-03-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 RG43_RS06845 f53411ee7b1451467bc206f0aa5f94dd 540 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 370 377 6.7E-5 T 09-03-2017 RG43_RS06845 f53411ee7b1451467bc206f0aa5f94dd 540 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 6.7E-5 T 09-03-2017 RG43_RS06845 f53411ee7b1451467bc206f0aa5f94dd 540 Pfam PF00890 FAD binding domain 10 392 2.8E-106 T 09-03-2017 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 RG43_RS06845 f53411ee7b1451467bc206f0aa5f94dd 540 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 7 520 6.5E-239 T 09-03-2017 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 RG43_RS06845 f53411ee7b1451467bc206f0aa5f94dd 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 7.9E-11 T 09-03-2017 RG43_RS06845 f53411ee7b1451467bc206f0aa5f94dd 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 7.9E-11 T 09-03-2017 RG43_RS06845 f53411ee7b1451467bc206f0aa5f94dd 540 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 521 3.7E-14 T 09-03-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 RG43_RS06845 f53411ee7b1451467bc206f0aa5f94dd 540 SUPERFAMILY SSF51905 356 447 4.57E-75 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS06845 f53411ee7b1451467bc206f0aa5f94dd 540 SUPERFAMILY SSF51905 4 255 4.57E-75 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS06845 f53411ee7b1451467bc206f0aa5f94dd 540 Gene3D G3DSA:3.90.700.10 244 348 9.6E-37 T 09-03-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 RG43_RS06845 f53411ee7b1451467bc206f0aa5f94dd 540 Gene3D G3DSA:1.20.58.100 420 521 8.4E-35 T 09-03-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 RG43_RS06845 f53411ee7b1451467bc206f0aa5f94dd 540 Gene3D G3DSA:3.50.50.60 3 243 2.0E-102 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS06845 f53411ee7b1451467bc206f0aa5f94dd 540 Gene3D G3DSA:3.50.50.60 349 408 2.0E-102 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS17675 3228546a66922e9a39fd3840f32d1a39 254 Pfam PF12697 Alpha/beta hydrolase family 19 246 3.7E-19 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 RG43_RS17675 3228546a66922e9a39fd3840f32d1a39 254 Gene3D G3DSA:3.40.50.1820 4 253 1.4E-48 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS17675 3228546a66922e9a39fd3840f32d1a39 254 SUPERFAMILY SSF53474 12 253 2.53E-51 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS11870 3f217d7cc945ed61d496e910779d205b 268 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 223 234 - T 09-03-2017 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 RG43_RS11870 3f217d7cc945ed61d496e910779d205b 268 Gene3D G3DSA:3.60.10.10 1 267 4.5E-87 T 09-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase RG43_RS11870 3f217d7cc945ed61d496e910779d205b 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 259 7.7E-29 T 09-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase RG43_RS11870 3f217d7cc945ed61d496e910779d205b 268 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 197 213 - T 09-03-2017 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 RG43_RS11870 3f217d7cc945ed61d496e910779d205b 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 266 4.6E-94 T 09-03-2017 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 RG43_RS11870 3f217d7cc945ed61d496e910779d205b 268 SUPERFAMILY SSF56219 1 267 3.93E-87 T 09-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase RG43_RS11870 3f217d7cc945ed61d496e910779d205b 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 09-03-2017 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 RG43_RS11870 3f217d7cc945ed61d496e910779d205b 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 266 1.2E-110 T 09-03-2017 RG43_RS23910 58ca1ae055f52a8dcc0e54c2540d8c43 466 Gene3D G3DSA:3.50.50.60 279 338 4.6E-57 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS23910 58ca1ae055f52a8dcc0e54c2540d8c43 466 Gene3D G3DSA:3.50.50.60 5 150 4.6E-57 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS23910 58ca1ae055f52a8dcc0e54c2540d8c43 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 457 1.7E-30 T 09-03-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RG43_RS23910 58ca1ae055f52a8dcc0e54c2540d8c43 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 5.9E-58 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS23910 58ca1ae055f52a8dcc0e54c2540d8c43 466 SUPERFAMILY SSF55424 345 463 1.05E-30 T 09-03-2017 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RG43_RS23910 58ca1ae055f52a8dcc0e54c2540d8c43 466 SUPERFAMILY SSF51905 2 335 2.75E-54 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS23910 58ca1ae055f52a8dcc0e54c2540d8c43 466 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 2 466 70.327 T 09-03-2017 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 RG43_RS23910 58ca1ae055f52a8dcc0e54c2540d8c43 466 PIRSF PIRSF000350 2 463 1.2E-69 T 09-03-2017 RG43_RS23910 58ca1ae055f52a8dcc0e54c2540d8c43 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 9.4E-25 T 09-03-2017 RG43_RS23910 58ca1ae055f52a8dcc0e54c2540d8c43 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 9.4E-25 T 09-03-2017 RG43_RS23910 58ca1ae055f52a8dcc0e54c2540d8c43 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 9.4E-25 T 09-03-2017 RG43_RS23910 58ca1ae055f52a8dcc0e54c2540d8c43 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 9.4E-25 T 09-03-2017 RG43_RS23910 58ca1ae055f52a8dcc0e54c2540d8c43 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 9.4E-25 T 09-03-2017 RG43_RS23910 58ca1ae055f52a8dcc0e54c2540d8c43 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 1.1E-49 T 09-03-2017 RG43_RS23910 58ca1ae055f52a8dcc0e54c2540d8c43 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 1.1E-49 T 09-03-2017 RG43_RS23910 58ca1ae055f52a8dcc0e54c2540d8c43 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.1E-49 T 09-03-2017 RG43_RS23910 58ca1ae055f52a8dcc0e54c2540d8c43 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 1.1E-49 T 09-03-2017 RG43_RS23910 58ca1ae055f52a8dcc0e54c2540d8c43 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 1.1E-49 T 09-03-2017 RG43_RS23910 58ca1ae055f52a8dcc0e54c2540d8c43 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 1.1E-49 T 09-03-2017 RG43_RS23910 58ca1ae055f52a8dcc0e54c2540d8c43 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 1.1E-49 T 09-03-2017 RG43_RS23910 58ca1ae055f52a8dcc0e54c2540d8c43 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 1.1E-49 T 09-03-2017 RG43_RS23910 58ca1ae055f52a8dcc0e54c2540d8c43 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 1.1E-49 T 09-03-2017 RG43_RS23910 58ca1ae055f52a8dcc0e54c2540d8c43 466 Gene3D G3DSA:3.50.50.60 157 278 1.7E-25 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS23910 58ca1ae055f52a8dcc0e54c2540d8c43 466 Gene3D G3DSA:3.30.390.30 345 460 2.7E-33 T 09-03-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RG43_RS22205 70f77515ae5152721aa409d06a96278c 337 Gene3D G3DSA:3.40.50.1370 144 319 4.1E-74 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RG43_RS22205 70f77515ae5152721aa409d06a96278c 337 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 7 332 3.0E-140 T 09-03-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RG43_RS22205 70f77515ae5152721aa409d06a96278c 337 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 7 147 1.6E-47 T 09-03-2017 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 RG43_RS22205 70f77515ae5152721aa409d06a96278c 337 Gene3D G3DSA:3.40.50.1370 4 143 4.4E-58 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RG43_RS22205 70f77515ae5152721aa409d06a96278c 337 PRINTS PR00102 Ornithine carbamoyltransferase signature 50 64 6.1E-32 T 09-03-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RG43_RS22205 70f77515ae5152721aa409d06a96278c 337 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 6.1E-32 T 09-03-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RG43_RS22205 70f77515ae5152721aa409d06a96278c 337 PRINTS PR00102 Ornithine carbamoyltransferase signature 83 96 6.1E-32 T 09-03-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RG43_RS22205 70f77515ae5152721aa409d06a96278c 337 PRINTS PR00102 Ornithine carbamoyltransferase signature 123 137 6.1E-32 T 09-03-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RG43_RS22205 70f77515ae5152721aa409d06a96278c 337 PRINTS PR00102 Ornithine carbamoyltransferase signature 229 239 6.1E-32 T 09-03-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RG43_RS22205 70f77515ae5152721aa409d06a96278c 337 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 1.0E-25 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RG43_RS22205 70f77515ae5152721aa409d06a96278c 337 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 1.0E-25 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RG43_RS22205 70f77515ae5152721aa409d06a96278c 337 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 267 276 1.0E-25 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RG43_RS22205 70f77515ae5152721aa409d06a96278c 337 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 134 145 1.0E-25 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RG43_RS22205 70f77515ae5152721aa409d06a96278c 337 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 52 59 - T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RG43_RS22205 70f77515ae5152721aa409d06a96278c 337 SUPERFAMILY SSF53671 2 334 8.64E-99 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RG43_RS22205 70f77515ae5152721aa409d06a96278c 337 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 156 330 1.3E-54 T 09-03-2017 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 RG43_RS22205 70f77515ae5152721aa409d06a96278c 337 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 6 333 82.722 T 09-03-2017 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RG43_RS11990 0ada40492a8e217bf2a543a0b8382041 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 88 191 2.2E-11 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RG43_RS11990 0ada40492a8e217bf2a543a0b8382041 222 Gene3D G3DSA:3.40.50.1000 83 216 2.4E-36 T 09-03-2017 IPR023214 HAD-like domain RG43_RS11990 0ada40492a8e217bf2a543a0b8382041 222 SUPERFAMILY SSF56784 7 216 6.43E-48 T 09-03-2017 IPR023214 HAD-like domain RG43_RS11990 0ada40492a8e217bf2a543a0b8382041 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 104 117 7.8E-5 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RG43_RS11990 0ada40492a8e217bf2a543a0b8382041 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 135 151 7.8E-5 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RG43_RS11990 0ada40492a8e217bf2a543a0b8382041 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 7.8E-5 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RG43_RS11990 0ada40492a8e217bf2a543a0b8382041 222 Gene3D G3DSA:1.10.150.240 20 82 2.8E-37 T 09-03-2017 IPR023198 Phosphoglycolate phosphatase, domain 2 RG43_RS11990 0ada40492a8e217bf2a543a0b8382041 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 191 4.1E-22 T 09-03-2017 IPR023214 HAD-like domain RG43_RS13340 5cff207395f3b0ed9ab6486088baddb1 171 SUPERFAMILY SSF55729 3 165 2.4E-35 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS13340 5cff207395f3b0ed9ab6486088baddb1 171 Pfam PF13420 Acetyltransferase (GNAT) domain 3 154 2.3E-18 T 09-03-2017 RG43_RS13340 5cff207395f3b0ed9ab6486088baddb1 171 Gene3D G3DSA:3.40.630.30 1 166 1.5E-42 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS05045 73340d20313520da6931f65a511eadf0 43 ProDom PD050163 YQGB INNER MEMBRANE STY3241 1 39 2.0E-16 T 09-03-2017 IPR020196 Uncharacterised protein family YqgB RG43_RS05045 73340d20313520da6931f65a511eadf0 43 Pfam PF11036 Virulence promoting factor 1 43 2.8E-33 T 09-03-2017 IPR020196 Uncharacterised protein family YqgB RG43_RS22585 e86a0f05b60baea10a429af38be5b6dc 546 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 403 422 - T 09-03-2017 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RG43_RS22585 e86a0f05b60baea10a429af38be5b6dc 546 Gene3D G3DSA:2.40.110.10 186 281 2.0E-23 T 09-03-2017 RG43_RS22585 e86a0f05b60baea10a429af38be5b6dc 546 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 290 444 1.2E-30 T 09-03-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RG43_RS22585 e86a0f05b60baea10a429af38be5b6dc 546 SUPERFAMILY SSF56645 65 287 1.0E-34 T 09-03-2017 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RG43_RS22585 e86a0f05b60baea10a429af38be5b6dc 546 Gene3D G3DSA:1.20.140.10 282 448 3.3E-43 T 09-03-2017 RG43_RS22585 e86a0f05b60baea10a429af38be5b6dc 546 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 186 280 7.9E-18 T 09-03-2017 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RG43_RS22585 e86a0f05b60baea10a429af38be5b6dc 546 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 188 200 - T 09-03-2017 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RG43_RS22585 e86a0f05b60baea10a429af38be5b6dc 546 SUPERFAMILY SSF47203 296 447 5.32E-41 T 09-03-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RG43_RS17540 6c6e2a19f1d7d020e2e532369171e8c8 214 PRINTS PR00394 RHS protein signature 12 27 4.7E-15 T 09-03-2017 IPR001826 RHS protein RG43_RS17540 6c6e2a19f1d7d020e2e532369171e8c8 214 PRINTS PR00394 RHS protein signature 59 78 4.7E-15 T 09-03-2017 IPR001826 RHS protein RG43_RS17540 6c6e2a19f1d7d020e2e532369171e8c8 214 PRINTS PR00394 RHS protein signature 36 56 4.7E-15 T 09-03-2017 IPR001826 RHS protein RG43_RS17540 6c6e2a19f1d7d020e2e532369171e8c8 214 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 14 91 2.8E-30 T 09-03-2017 IPR022385 Rhs repeat-associated core GO:0097264 RG43_RS04185 010835c0dc87b9d78a3ec2f75321ba62 318 Gene3D G3DSA:1.10.10.60 207 262 1.4E-14 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS04185 010835c0dc87b9d78a3ec2f75321ba62 318 SUPERFAMILY SSF46689 262 312 4.48E-11 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS04185 010835c0dc87b9d78a3ec2f75321ba62 318 Pfam PF06719 AraC-type transcriptional regulator N-terminus 47 197 5.9E-38 T 09-03-2017 IPR009594 Transcription regulator HTH, AraC, N-terminal RG43_RS04185 010835c0dc87b9d78a3ec2f75321ba62 318 Pfam PF12833 Helix-turn-helix domain 232 307 1.8E-21 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS04185 010835c0dc87b9d78a3ec2f75321ba62 318 SMART SM00342 226 309 2.4E-30 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS04185 010835c0dc87b9d78a3ec2f75321ba62 318 SUPERFAMILY SSF46689 210 260 1.24E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS04185 010835c0dc87b9d78a3ec2f75321ba62 318 Gene3D G3DSA:1.10.10.60 263 307 1.7E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS26560 010835c0dc87b9d78a3ec2f75321ba62 318 Gene3D G3DSA:1.10.10.60 207 262 1.4E-14 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS26560 010835c0dc87b9d78a3ec2f75321ba62 318 SUPERFAMILY SSF46689 262 312 4.48E-11 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS26560 010835c0dc87b9d78a3ec2f75321ba62 318 Pfam PF06719 AraC-type transcriptional regulator N-terminus 47 197 5.9E-38 T 09-03-2017 IPR009594 Transcription regulator HTH, AraC, N-terminal RG43_RS26560 010835c0dc87b9d78a3ec2f75321ba62 318 Pfam PF12833 Helix-turn-helix domain 232 307 1.8E-21 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS26560 010835c0dc87b9d78a3ec2f75321ba62 318 SMART SM00342 226 309 2.4E-30 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS26560 010835c0dc87b9d78a3ec2f75321ba62 318 SUPERFAMILY SSF46689 210 260 1.24E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS26560 010835c0dc87b9d78a3ec2f75321ba62 318 Gene3D G3DSA:1.10.10.60 263 307 1.7E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS05980 2c44c48e30071084964d23b783dcdd30 484 Pfam PF02913 FAD linked oxidases, C-terminal domain 228 478 5.7E-19 T 09-03-2017 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RG43_RS05980 2c44c48e30071084964d23b783dcdd30 484 Pfam PF01565 FAD binding domain 51 190 2.1E-34 T 09-03-2017 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RG43_RS05980 2c44c48e30071084964d23b783dcdd30 484 SUPERFAMILY SSF56176 6 225 1.78E-47 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RG43_RS05980 2c44c48e30071084964d23b783dcdd30 484 Gene3D G3DSA:3.30.43.10 6 107 5.4E-16 T 09-03-2017 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RG43_RS05980 2c44c48e30071084964d23b783dcdd30 484 Gene3D G3DSA:3.30.465.10 108 225 9.4E-30 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RG43_RS05980 2c44c48e30071084964d23b783dcdd30 484 Gene3D G3DSA:1.10.45.10 454 477 4.1E-4 T 09-03-2017 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RG43_RS05980 2c44c48e30071084964d23b783dcdd30 484 SUPERFAMILY SSF55103 204 481 2.62E-25 T 09-03-2017 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RG43_RS20555 b5e192ef60dfcf62ed21e2b5de4364e0 86 SUPERFAMILY SSF101744 1 85 1.57E-29 T 09-03-2017 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 RG43_RS20555 b5e192ef60dfcf62ed21e2b5de4364e0 86 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 9 83 6.0E-29 T 09-03-2017 IPR009778 Modulator of Rho-dependent transcription termination RG43_RS08645 5985caac83c99f5860f353ce1dd97faa 394 Gene3D G3DSA:3.40.47.10 277 392 2.7E-68 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 RG43_RS08645 5985caac83c99f5860f353ce1dd97faa 394 Gene3D G3DSA:3.40.47.10 144 194 2.7E-68 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 RG43_RS08645 5985caac83c99f5860f353ce1dd97faa 394 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 09-03-2017 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 RG43_RS08645 5985caac83c99f5860f353ce1dd97faa 394 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 09-03-2017 IPR020610 Thiolase, active site GO:0008152|GO:0016747 RG43_RS08645 5985caac83c99f5860f353ce1dd97faa 394 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 09-03-2017 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 RG43_RS08645 5985caac83c99f5860f353ce1dd97faa 394 Pfam PF00108 Thiolase, N-terminal domain 4 263 1.2E-103 T 09-03-2017 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RG43_RS08645 5985caac83c99f5860f353ce1dd97faa 394 SUPERFAMILY SSF53901 272 392 6.45E-46 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 RG43_RS08645 5985caac83c99f5860f353ce1dd97faa 394 Pfam PF02803 Thiolase, C-terminal domain 271 392 2.5E-53 T 09-03-2017 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RG43_RS08645 5985caac83c99f5860f353ce1dd97faa 394 PIRSF PIRSF000429 1 394 8.3E-134 T 09-03-2017 IPR002155 Thiolase GO:0008152|GO:0016747 RG43_RS08645 5985caac83c99f5860f353ce1dd97faa 394 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 1.6E-148 T 09-03-2017 IPR002155 Thiolase GO:0008152|GO:0016747 RG43_RS08645 5985caac83c99f5860f353ce1dd97faa 394 Gene3D G3DSA:3.40.47.10 5 123 3.4E-74 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 RG43_RS08645 5985caac83c99f5860f353ce1dd97faa 394 Gene3D G3DSA:3.40.47.10 195 276 3.4E-74 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 RG43_RS08645 5985caac83c99f5860f353ce1dd97faa 394 SUPERFAMILY SSF53901 4 267 5.62E-83 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 RG43_RS18040 e12fa98a49523be028e9ff30aee67f2c 136 Pfam PF14760 Rnk N-terminus 4 42 1.7E-10 T 09-03-2017 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain RG43_RS18040 e12fa98a49523be028e9ff30aee67f2c 136 SUPERFAMILY SSF54534 49 127 1.96E-18 T 09-03-2017 RG43_RS18040 e12fa98a49523be028e9ff30aee67f2c 136 Gene3D G3DSA:3.10.50.30 46 135 4.4E-30 T 09-03-2017 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 RG43_RS18040 e12fa98a49523be028e9ff30aee67f2c 136 Gene3D G3DSA:1.10.286.20 1 44 1.7E-22 T 09-03-2017 RG43_RS18040 e12fa98a49523be028e9ff30aee67f2c 136 Hamap MF_00954 Regulator of nucleoside diphosphate kinase [rnk]. 1 136 43.797 T 09-03-2017 IPR028625 Regulator of nucleoside diphosphate kinase GO:0065007|GO:0070063 RG43_RS18040 e12fa98a49523be028e9ff30aee67f2c 136 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 50 126 1.9E-20 T 09-03-2017 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 RG43_RS24370 fe4f2a755e7bbaee9aab225e96336011 371 SUPERFAMILY SSF110849 47 98 2.62E-8 T 09-03-2017 IPR003115 ParB/Sulfiredoxin RG43_RS24370 fe4f2a755e7bbaee9aab225e96336011 371 Pfam PF02195 ParB-like nuclease domain 43 110 3.5E-8 T 09-03-2017 IPR003115 ParB/Sulfiredoxin RG43_RS24370 fe4f2a755e7bbaee9aab225e96336011 371 Gene3D G3DSA:3.90.1530.10 49 102 8.6E-10 T 09-03-2017 RG43_RS25385 23707f97023e8f1b82c6afef143a8cb8 501 Gene3D G3DSA:3.40.50.300 267 490 1.5E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25385 23707f97023e8f1b82c6afef143a8cb8 501 Gene3D G3DSA:3.40.50.300 2 235 8.7E-60 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25385 23707f97023e8f1b82c6afef143a8cb8 501 SMART SM00382 277 472 2.6E-9 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS25385 23707f97023e8f1b82c6afef143a8cb8 501 SMART SM00382 29 219 1.7E-6 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS25385 23707f97023e8f1b82c6afef143a8cb8 501 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS25385 23707f97023e8f1b82c6afef143a8cb8 501 SUPERFAMILY SSF52540 249 483 7.99E-50 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25385 23707f97023e8f1b82c6afef143a8cb8 501 SUPERFAMILY SSF52540 4 231 1.81E-54 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25385 23707f97023e8f1b82c6afef143a8cb8 501 Pfam PF00005 ABC transporter 269 423 1.2E-24 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS25385 23707f97023e8f1b82c6afef143a8cb8 501 Pfam PF00005 ABC transporter 22 169 1.2E-28 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS17855 b7977d403d7f38e30574a25db055bf43 311 Gene3D G3DSA:3.90.245.10 4 308 3.9E-115 T 09-03-2017 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain RG43_RS17855 b7977d403d7f38e30574a25db055bf43 311 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 4 300 1.6E-77 T 09-03-2017 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain RG43_RS17855 b7977d403d7f38e30574a25db055bf43 311 Hamap MF_01431 Pyrimidine-specific ribonucleoside hydrolase RihA [rihA]. 1 311 82.407 T 09-03-2017 IPR022975 Pyrimidine-specific ribonucleoside hydrolase RihA GO:0005737|GO:0006206|GO:0008152|GO:0015949|GO:0016787|GO:0016798|GO:0045437 RG43_RS17855 b7977d403d7f38e30574a25db055bf43 311 SUPERFAMILY SSF53590 4 308 1.44E-107 T 09-03-2017 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain RG43_RS17855 b7977d403d7f38e30574a25db055bf43 311 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 8 18 - T 09-03-2017 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 RG43_RS13765 a235e41286a7eb789939a244922ffe69 242 Gene3D G3DSA:3.40.630.10 18 223 3.1E-43 T 09-03-2017 RG43_RS13765 a235e41286a7eb789939a244922ffe69 242 Pfam PF00246 Zinc carboxypeptidase 73 157 1.3E-12 T 09-03-2017 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 RG43_RS13765 a235e41286a7eb789939a244922ffe69 242 SUPERFAMILY SSF53187 129 234 3.31E-33 T 09-03-2017 RG43_RS13765 a235e41286a7eb789939a244922ffe69 242 SUPERFAMILY SSF53187 16 102 3.31E-33 T 09-03-2017 RG43_RS00530 a6015a08e7758fb401b9a24c230d7154 152 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 7 151 34.516 T 09-03-2017 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|Reactome: R-HSA-500753 RG43_RS00530 a6015a08e7758fb401b9a24c230d7154 152 TIGRFAM TIGR00576 dut: dUTP diphosphatase 11 151 2.2E-50 T 09-03-2017 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|Reactome: R-HSA-500753 RG43_RS00530 a6015a08e7758fb401b9a24c230d7154 152 Gene3D G3DSA:2.70.40.10 6 151 2.6E-53 T 09-03-2017 IPR029054 dUTPase-like RG43_RS00530 a6015a08e7758fb401b9a24c230d7154 152 SUPERFAMILY SSF51283 1 151 2.75E-56 T 09-03-2017 IPR029054 dUTPase-like RG43_RS00530 a6015a08e7758fb401b9a24c230d7154 152 Pfam PF00692 dUTPase 17 150 3.6E-45 T 09-03-2017 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 RG43_RS20975 46a9878e5f5f0a1f25c26a908baa14ab 254 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 1.5E-25 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS20975 46a9878e5f5f0a1f25c26a908baa14ab 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 2.9E-11 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS20975 46a9878e5f5f0a1f25c26a908baa14ab 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 2.9E-11 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS20975 46a9878e5f5f0a1f25c26a908baa14ab 254 Gene3D G3DSA:1.20.120.530 97 238 5.3E-18 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal RG43_RS20975 46a9878e5f5f0a1f25c26a908baa14ab 254 SUPERFAMILY SSF46785 6 76 4.2E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS20975 46a9878e5f5f0a1f25c26a908baa14ab 254 Gene3D G3DSA:1.10.10.10 7 76 2.4E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS20975 46a9878e5f5f0a1f25c26a908baa14ab 254 SUPERFAMILY SSF48008 95 234 3.4E-20 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal RG43_RS20975 46a9878e5f5f0a1f25c26a908baa14ab 254 Pfam PF07729 FCD domain 99 226 2.4E-17 T 09-03-2017 IPR011711 GntR, C-terminal RG43_RS20975 46a9878e5f5f0a1f25c26a908baa14ab 254 SMART SM00895 99 227 9.2E-17 T 09-03-2017 IPR011711 GntR, C-terminal RG43_RS20975 46a9878e5f5f0a1f25c26a908baa14ab 254 SMART SM00345 15 74 3.0E-29 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS24845 adda86f7fcb0788b86d7c7f03920464e 201 SUPERFAMILY SSF55718 12 111 4.41E-7 T 09-03-2017 IPR003033 SCP2 sterol-binding domain RG43_RS24845 adda86f7fcb0788b86d7c7f03920464e 201 Pfam PF02036 SCP-2 sterol transfer family 15 112 2.1E-20 T 09-03-2017 IPR003033 SCP2 sterol-binding domain RG43_RS21255 a8a43d96b24639836a067bc81fb701b0 231 Hamap MF_00989 L-ribulose-5-phosphate 4-epimerase [araD]. 1 231 76.885 T 09-03-2017 RG43_RS21255 a8a43d96b24639836a067bc81fb701b0 231 SUPERFAMILY SSF53639 1 223 5.89E-71 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal RG43_RS21255 a8a43d96b24639836a067bc81fb701b0 231 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 196 4.4E-48 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal RG43_RS21255 a8a43d96b24639836a067bc81fb701b0 231 Gene3D G3DSA:3.40.225.10 2 231 2.7E-74 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal RG43_RS21255 a8a43d96b24639836a067bc81fb701b0 231 SMART SM01007 7 198 5.5E-70 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal RG43_RS21255 a8a43d96b24639836a067bc81fb701b0 231 TIGRFAM TIGR00760 araD: L-ribulose-5-phosphate 4-epimerase 1 231 8.5E-135 T 09-03-2017 IPR004661 L-ribulose-5-phosphate 4-epimerase GO:0008270|GO:0008742|GO:0019572 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 RG43_RS13035 e6d3b79eb4015d39462db5469fa3c5bd 96 Pfam PF13683 Integrase core domain 11 76 1.9E-18 T 09-03-2017 IPR001584 Integrase, catalytic core GO:0015074 RG43_RS13035 e6d3b79eb4015d39462db5469fa3c5bd 96 Gene3D G3DSA:3.30.420.10 10 86 4.4E-13 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS13035 e6d3b79eb4015d39462db5469fa3c5bd 96 SUPERFAMILY SSF53098 10 86 1.11E-13 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS17045 9b4175cd3e2622b148e01123c6a3115a 237 SUPERFAMILY SSF47413 4 95 5.07E-20 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS17045 9b4175cd3e2622b148e01123c6a3115a 237 Pfam PF01381 Helix-turn-helix 24 77 1.1E-10 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RG43_RS17045 9b4175cd3e2622b148e01123c6a3115a 237 SUPERFAMILY SSF51306 138 232 9.24E-30 T 09-03-2017 IPR015927 Peptidase S24/S26A/S26B/S26C RG43_RS17045 9b4175cd3e2622b148e01123c6a3115a 237 Gene3D G3DSA:1.10.260.40 7 85 6.8E-37 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS17045 9b4175cd3e2622b148e01123c6a3115a 237 Pfam PF00717 Peptidase S24-like 145 218 4.4E-17 T 09-03-2017 IPR019759 Peptidase S24/S26A/S26B RG43_RS17045 9b4175cd3e2622b148e01123c6a3115a 237 SMART SM00530 18 77 8.3E-10 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RG43_RS17045 9b4175cd3e2622b148e01123c6a3115a 237 Gene3D G3DSA:2.10.109.10 138 232 4.3E-36 T 09-03-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain RG43_RS11900 40238e118d2cf8c8336ac5ef71cb2ea7 322 PIRSF PIRSF017020 1 322 2.6E-118 T 09-03-2017 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 RG43_RS11900 40238e118d2cf8c8336ac5ef71cb2ea7 322 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 45 320 1.7E-72 T 09-03-2017 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 RG43_RS11900 40238e118d2cf8c8336ac5ef71cb2ea7 322 TIGRFAM TIGR03242 arg_catab_astE: succinylglutamate desuccinylase 3 318 4.2E-145 T 09-03-2017 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 RG43_RS11900 40238e118d2cf8c8336ac5ef71cb2ea7 322 SUPERFAMILY SSF53187 1 319 2.88E-92 T 09-03-2017 RG43_RS11900 40238e118d2cf8c8336ac5ef71cb2ea7 322 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 322 152.422 T 09-03-2017 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 RG43_RS11900 40238e118d2cf8c8336ac5ef71cb2ea7 322 Gene3D G3DSA:3.40.630.10 45 235 4.3E-14 T 09-03-2017 RG43_RS17315 5506f1e2c28b9da3d0e59cb3d8ba2457 430 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 15 427 4.4E-157 T 09-03-2017 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 RG43_RS17315 5506f1e2c28b9da3d0e59cb3d8ba2457 430 Hamap MF_00671 Protein TolB [tolB]. 5 426 34.523 T 09-03-2017 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 RG43_RS17315 5506f1e2c28b9da3d0e59cb3d8ba2457 430 SUPERFAMILY SSF52964 29 161 4.84E-40 T 09-03-2017 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 RG43_RS17315 5506f1e2c28b9da3d0e59cb3d8ba2457 430 Gene3D G3DSA:2.130.10.10 155 428 9.0E-75 T 09-03-2017 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RG43_RS17315 5506f1e2c28b9da3d0e59cb3d8ba2457 430 Gene3D G3DSA:3.40.50.10070 22 154 4.0E-51 T 09-03-2017 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 RG43_RS17315 5506f1e2c28b9da3d0e59cb3d8ba2457 430 Pfam PF07676 WD40-like Beta Propeller Repeat 281 315 4.3E-10 T 09-03-2017 IPR011659 WD40-like Beta Propeller RG43_RS17315 5506f1e2c28b9da3d0e59cb3d8ba2457 430 Pfam PF07676 WD40-like Beta Propeller Repeat 199 223 4.2E-5 T 09-03-2017 IPR011659 WD40-like Beta Propeller RG43_RS17315 5506f1e2c28b9da3d0e59cb3d8ba2457 430 Pfam PF07676 WD40-like Beta Propeller Repeat 369 396 0.0031 T 09-03-2017 IPR011659 WD40-like Beta Propeller RG43_RS17315 5506f1e2c28b9da3d0e59cb3d8ba2457 430 Pfam PF07676 WD40-like Beta Propeller Repeat 237 272 1.8E-9 T 09-03-2017 IPR011659 WD40-like Beta Propeller RG43_RS17315 5506f1e2c28b9da3d0e59cb3d8ba2457 430 SUPERFAMILY SSF69304 155 428 7.98E-56 T 09-03-2017 RG43_RS17315 5506f1e2c28b9da3d0e59cb3d8ba2457 430 Pfam PF04052 TolB amino-terminal domain 23 121 4.5E-31 T 09-03-2017 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 RG43_RS09425 333881755834af746a09dcb8f81fd6b2 110 Gene3D G3DSA:3.30.160.160 3 49 5.0E-23 T 09-03-2017 IPR010879 Domain of unknown function DUF1508 RG43_RS09425 333881755834af746a09dcb8f81fd6b2 110 Gene3D G3DSA:3.30.160.160 55 100 2.1E-21 T 09-03-2017 IPR010879 Domain of unknown function DUF1508 RG43_RS09425 333881755834af746a09dcb8f81fd6b2 110 SUPERFAMILY SSF160113 61 108 3.53E-16 T 09-03-2017 IPR010879 Domain of unknown function DUF1508 RG43_RS09425 333881755834af746a09dcb8f81fd6b2 110 Pfam PF07411 Domain of unknown function (DUF1508) 61 108 3.2E-21 T 09-03-2017 IPR010879 Domain of unknown function DUF1508 RG43_RS09425 333881755834af746a09dcb8f81fd6b2 110 Pfam PF07411 Domain of unknown function (DUF1508) 11 57 4.4E-22 T 09-03-2017 IPR010879 Domain of unknown function DUF1508 RG43_RS09425 333881755834af746a09dcb8f81fd6b2 110 SUPERFAMILY SSF160113 1 57 9.94E-20 T 09-03-2017 IPR010879 Domain of unknown function DUF1508 RG43_RS05265 75abfef7a48540ad9ec4e305a2c4eb40 479 Gene3D G3DSA:3.20.20.80 7 477 1.4E-153 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RG43_RS05265 75abfef7a48540ad9ec4e305a2c4eb40 479 Pfam PF00232 Glycosyl hydrolase family 1 7 476 1.2E-131 T 09-03-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 RG43_RS05265 75abfef7a48540ad9ec4e305a2c4eb40 479 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 12 26 - T 09-03-2017 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site RG43_RS05265 75abfef7a48540ad9ec4e305a2c4eb40 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 416 433 2.1E-16 T 09-03-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 RG43_RS05265 75abfef7a48540ad9ec4e305a2c4eb40 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 441 453 2.1E-16 T 09-03-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 RG43_RS05265 75abfef7a48540ad9ec4e305a2c4eb40 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 394 405 2.1E-16 T 09-03-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 RG43_RS05265 75abfef7a48540ad9ec4e305a2c4eb40 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 308 322 2.1E-16 T 09-03-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 RG43_RS05265 75abfef7a48540ad9ec4e305a2c4eb40 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 373 381 2.1E-16 T 09-03-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 RG43_RS05265 75abfef7a48540ad9ec4e305a2c4eb40 479 SUPERFAMILY SSF51445 4 472 2.84E-167 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily RG43_RS05265 75abfef7a48540ad9ec4e305a2c4eb40 479 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 373 381 - T 09-03-2017 IPR018120 Glycoside hydrolase family 1, active site RG43_RS05615 7a14aabf6d052d3b41df1931ccefc3c5 608 SUPERFAMILY SSF52540 281 378 7.97E-67 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS05615 7a14aabf6d052d3b41df1931ccefc3c5 608 SUPERFAMILY SSF52540 434 602 7.97E-67 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS05615 7a14aabf6d052d3b41df1931ccefc3c5 608 Gene3D G3DSA:3.40.50.300 153 296 1.8E-16 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS05615 7a14aabf6d052d3b41df1931ccefc3c5 608 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 9 602 2.6E-197 T 09-03-2017 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 RG43_RS05615 7a14aabf6d052d3b41df1931ccefc3c5 608 SUPERFAMILY SSF52540 6 360 1.28E-62 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS05615 7a14aabf6d052d3b41df1931ccefc3c5 608 Pfam PF13538 UvrD-like helicase C-terminal domain 534 579 1.0E-14 T 09-03-2017 IPR027785 UvrD-like helicase C-terminal domain RG43_RS05615 7a14aabf6d052d3b41df1931ccefc3c5 608 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 16 602 55.469 T 09-03-2017 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 RG43_RS05615 7a14aabf6d052d3b41df1931ccefc3c5 608 Gene3D G3DSA:3.40.50.300 354 380 3.8E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS05615 7a14aabf6d052d3b41df1931ccefc3c5 608 Gene3D G3DSA:3.40.50.300 418 464 3.8E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS05615 7a14aabf6d052d3b41df1931ccefc3c5 608 Gene3D G3DSA:3.40.50.300 297 310 3.8E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS05615 7a14aabf6d052d3b41df1931ccefc3c5 608 Gene3D G3DSA:3.40.50.300 521 592 3.8E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS05615 7a14aabf6d052d3b41df1931ccefc3c5 608 SMART SM00382 163 320 0.0093 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS05615 7a14aabf6d052d3b41df1931ccefc3c5 608 Pfam PF13604 AAA domain 155 318 2.3E-32 T 09-03-2017 RG43_RS16215 62118b7f21ab3c9957defb7bff19a886 330 Pfam PF04393 Protein of unknown function (DUF535) 48 325 2.6E-100 T 09-03-2017 IPR007488 Protein of unknown function DUF535 RG43_RS06310 f317dc5d088a9fdd15453fbd33493c8e 337 SUPERFAMILY SSF53822 61 332 2.16E-68 T 09-03-2017 IPR028082 Periplasmic binding protein-like I RG43_RS06310 f317dc5d088a9fdd15453fbd33493c8e 337 Gene3D G3DSA:3.40.50.2300 59 169 2.2E-34 T 09-03-2017 RG43_RS06310 f317dc5d088a9fdd15453fbd33493c8e 337 Gene3D G3DSA:1.10.260.40 3 58 1.2E-25 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS06310 f317dc5d088a9fdd15453fbd33493c8e 337 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 09-03-2017 RG43_RS06310 f317dc5d088a9fdd15453fbd33493c8e 337 Gene3D G3DSA:3.40.50.2300 170 331 3.0E-50 T 09-03-2017 RG43_RS06310 f317dc5d088a9fdd15453fbd33493c8e 337 SUPERFAMILY SSF47413 2 60 3.1E-19 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS06310 f317dc5d088a9fdd15453fbd33493c8e 337 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 1.3E-21 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS06310 f317dc5d088a9fdd15453fbd33493c8e 337 Pfam PF13377 Periplasmic binding protein-like domain 172 331 2.4E-33 T 09-03-2017 RG43_RS06310 f317dc5d088a9fdd15453fbd33493c8e 337 SMART SM00354 2 72 9.1E-36 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS03980 57e0a11356ce3ca0dc086400937f1a7e 386 SUPERFAMILY SSF56059 1 168 1.94E-95 T 09-03-2017 RG43_RS03980 57e0a11356ce3ca0dc086400937f1a7e 386 SUPERFAMILY SSF56059 266 383 1.94E-95 T 09-03-2017 RG43_RS03980 57e0a11356ce3ca0dc086400937f1a7e 386 SUPERFAMILY SSF52440 174 279 3.16E-39 T 09-03-2017 IPR016185 Pre-ATP-grasp domain RG43_RS03980 57e0a11356ce3ca0dc086400937f1a7e 386 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 384 1.9E-162 T 09-03-2017 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain RG43_RS26355 57e0a11356ce3ca0dc086400937f1a7e 386 SUPERFAMILY SSF56059 1 168 1.94E-95 T 09-03-2017 RG43_RS26355 57e0a11356ce3ca0dc086400937f1a7e 386 SUPERFAMILY SSF56059 266 383 1.94E-95 T 09-03-2017 RG43_RS26355 57e0a11356ce3ca0dc086400937f1a7e 386 SUPERFAMILY SSF52440 174 279 3.16E-39 T 09-03-2017 IPR016185 Pre-ATP-grasp domain RG43_RS26355 57e0a11356ce3ca0dc086400937f1a7e 386 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 384 1.9E-162 T 09-03-2017 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain RG43_RS05205 b86c0a462f4ebd00d9d7ce4a4a33e97a 19 Pfam PF13956 Toxin Ibs, type I toxin-antitoxin system 1 19 1.0E-12 T 09-03-2017 IPR025881 Toxin Ibs RG43_RS10725 6b83302f620c4a9aedf46505490d2c81 457 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 162 373 2.1E-70 T 09-03-2017 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RG43_RS10725 6b83302f620c4a9aedf46505490d2c81 457 SMART SM00382 174 357 7.6E-8 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS10725 6b83302f620c4a9aedf46505490d2c81 457 SUPERFAMILY SSF52540 109 379 1.69E-92 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS10725 6b83302f620c4a9aedf46505490d2c81 457 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 29 451 6.9E-196 T 09-03-2017 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RG43_RS10725 6b83302f620c4a9aedf46505490d2c81 457 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 364 373 - T 09-03-2017 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RG43_RS10725 6b83302f620c4a9aedf46505490d2c81 457 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 6 453 2.7E-201 T 09-03-2017 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RG43_RS10725 6b83302f620c4a9aedf46505490d2c81 457 Gene3D G3DSA:3.40.50.300 138 421 3.1E-89 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS09660 c20254bc97f3e6100e66ad606515c2a5 148 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 95 129 4.3E-6 T 09-03-2017 IPR001451 Hexapeptide repeat RG43_RS09660 c20254bc97f3e6100e66ad606515c2a5 148 Gene3D G3DSA:2.160.10.10 16 148 4.6E-31 T 09-03-2017 RG43_RS09660 c20254bc97f3e6100e66ad606515c2a5 148 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 58 75 0.076 T 09-03-2017 IPR001451 Hexapeptide repeat RG43_RS09660 c20254bc97f3e6100e66ad606515c2a5 148 SUPERFAMILY SSF51161 11 146 7.49E-30 T 09-03-2017 IPR011004 Trimeric LpxA-like RG43_RS12085 cdfea428da3ddfef589eeea2d2d511a1 249 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 4 248 46.231 T 09-03-2017 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 RG43_RS12085 cdfea428da3ddfef589eeea2d2d511a1 249 Pfam PF00005 ABC transporter 18 162 2.0E-21 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS12085 cdfea428da3ddfef589eeea2d2d511a1 249 Gene3D G3DSA:3.40.50.300 16 231 1.9E-47 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS12085 cdfea428da3ddfef589eeea2d2d511a1 249 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS12085 cdfea428da3ddfef589eeea2d2d511a1 249 SUPERFAMILY SSF52540 14 226 4.3E-46 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS12085 cdfea428da3ddfef589eeea2d2d511a1 249 SMART SM00382 25 224 5.1E-8 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS25465 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 Gene3D G3DSA:1.10.287.80 19 60 5.2E-40 T 09-03-2017 RG43_RS25465 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 Gene3D G3DSA:1.10.287.80 202 235 5.2E-40 T 09-03-2017 RG43_RS25465 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 Gene3D G3DSA:3.40.1380.10 63 191 5.0E-44 T 09-03-2017 RG43_RS25465 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 SUPERFAMILY SSF52943 2 287 5.1E-97 T 09-03-2017 IPR023633 ATPase, F1 complex, gamma subunit domain Reactome: R-HSA-163210 RG43_RS25465 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 Gene3D G3DSA:1.10.287.80 236 282 4.6E-30 T 09-03-2017 RG43_RS25465 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 287 1.9E-113 T 09-03-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 RG43_RS25465 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 287 36.385 T 09-03-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 RG43_RS25465 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 PRINTS PR00126 ATP synthase gamma subunit signature 234 253 1.9E-37 T 09-03-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 RG43_RS25465 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.9E-37 T 09-03-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 RG43_RS25465 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 PRINTS PR00126 ATP synthase gamma subunit signature 265 286 1.9E-37 T 09-03-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 RG43_RS25465 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 1.9E-37 T 09-03-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 RG43_RS25465 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 Pfam PF00231 ATP synthase 5 286 9.5E-92 T 09-03-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 RG43_RS25465 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 273 286 - T 09-03-2017 IPR023632 ATPase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210 RG43_RS07955 b6561f19bd7f1d3cbf90e386b3f5525d 79 Pfam PF13708 Domain of unknown function (DUF4942) 17 74 3.1E-7 T 09-03-2017 IPR031339 Domain of unknown function DUF4942 RG43_RS01305 ba46fd4bc7a3d5c86e2b96b824111242 318 Pfam PF01032 FecCD transport family 6 313 9.0E-95 T 09-03-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 RG43_RS01305 ba46fd4bc7a3d5c86e2b96b824111242 318 Gene3D G3DSA:1.10.3470.10 2 316 6.5E-106 T 09-03-2017 IPR029022 ABC transporter, BtuC-like RG43_RS01305 ba46fd4bc7a3d5c86e2b96b824111242 318 SUPERFAMILY SSF81345 3 314 4.71E-85 T 09-03-2017 IPR029022 ABC transporter, BtuC-like RG43_RS17680 0782f6f252c33425908184b0f367952b 97 SUPERFAMILY SSF47598 51 86 5.78E-5 T 09-03-2017 IPR010985 Ribbon-helix-helix GO:0006355 RG43_RS17680 0782f6f252c33425908184b0f367952b 97 Pfam PF01402 Ribbon-helix-helix protein, copG family 52 88 4.7E-10 T 09-03-2017 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 RG43_RS00810 6d4641e5d364b36d33887e896a5d6657 656 Pfam PF07944 Beta-L-arabinofuranosidase, GH127 12 560 4.1E-171 T 09-03-2017 IPR012878 Beta-L-arabinofuranosidase, GH127 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 RG43_RS00810 6d4641e5d364b36d33887e896a5d6657 656 SUPERFAMILY SSF48208 15 426 1.5E-39 T 09-03-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 RG43_RS00810 6d4641e5d364b36d33887e896a5d6657 656 Gene3D G3DSA:1.50.10.10 69 303 6.4E-20 T 09-03-2017 IPR012341 Six-hairpin glycosidase GO:0003824 RG43_RS26660 61345669abd940bb8727be49ddedca63 288 SUPERFAMILY SSF47616 133 279 9.33E-32 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like RG43_RS26660 61345669abd940bb8727be49ddedca63 288 Pfam PF13410 Glutathione S-transferase, C-terminal domain 175 244 1.2E-8 T 09-03-2017 RG43_RS26660 61345669abd940bb8727be49ddedca63 288 Gene3D G3DSA:1.20.1050.10 131 254 6.5E-43 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like RG43_RS26660 61345669abd940bb8727be49ddedca63 288 Gene3D G3DSA:3.40.30.10 33 130 4.5E-27 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS26660 61345669abd940bb8727be49ddedca63 288 Pfam PF02798 Glutathione S-transferase, N-terminal domain 65 127 6.2E-6 T 09-03-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RG43_RS26660 61345669abd940bb8727be49ddedca63 288 SUPERFAMILY SSF52833 37 130 6.34E-17 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS04285 61345669abd940bb8727be49ddedca63 288 SUPERFAMILY SSF47616 133 279 9.33E-32 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like RG43_RS04285 61345669abd940bb8727be49ddedca63 288 Pfam PF13410 Glutathione S-transferase, C-terminal domain 175 244 1.2E-8 T 09-03-2017 RG43_RS04285 61345669abd940bb8727be49ddedca63 288 Gene3D G3DSA:1.20.1050.10 131 254 6.5E-43 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like RG43_RS04285 61345669abd940bb8727be49ddedca63 288 Gene3D G3DSA:3.40.30.10 33 130 4.5E-27 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS04285 61345669abd940bb8727be49ddedca63 288 Pfam PF02798 Glutathione S-transferase, N-terminal domain 65 127 6.2E-6 T 09-03-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RG43_RS04285 61345669abd940bb8727be49ddedca63 288 SUPERFAMILY SSF52833 37 130 6.34E-17 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS05355 5adc6fcf1733482f402d80c2551253f9 162 Gene3D G3DSA:3.30.70.20 94 152 3.1E-16 T 09-03-2017 RG43_RS05355 5adc6fcf1733482f402d80c2551253f9 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 86 97 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS05355 5adc6fcf1733482f402d80c2551253f9 162 Pfam PF13247 4Fe-4S dicluster domain 51 140 3.9E-13 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS05355 5adc6fcf1733482f402d80c2551253f9 162 SUPERFAMILY SSF54862 4 155 2.41E-41 T 09-03-2017 RG43_RS05355 5adc6fcf1733482f402d80c2551253f9 162 Gene3D G3DSA:3.30.70.20 5 63 4.5E-7 T 09-03-2017 RG43_RS05355 5adc6fcf1733482f402d80c2551253f9 162 Gene3D G3DSA:3.30.70.20 64 93 1.1E-15 T 09-03-2017 RG43_RS08450 97bf100b88179d0f78049fd18383e388 252 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 4 251 32.665 T 09-03-2017 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 RG43_RS08450 97bf100b88179d0f78049fd18383e388 252 Gene3D G3DSA:3.40.50.1820 8 251 1.9E-55 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS08450 97bf100b88179d0f78049fd18383e388 252 Pfam PF12697 Alpha/beta hydrolase family 17 244 1.5E-18 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 RG43_RS08450 97bf100b88179d0f78049fd18383e388 252 SUPERFAMILY SSF53474 9 250 2.04E-39 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS08450 97bf100b88179d0f78049fd18383e388 252 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 15 250 7.8E-80 T 09-03-2017 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 RG43_RS23725 008d79e35bd2270915d40e060cca3867 158 Hamap MF_01181 Regulator of sigma D [rsd]. 1 151 41.283 T 09-03-2017 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd RG43_RS23725 008d79e35bd2270915d40e060cca3867 158 PIRSF PIRSF016548 1 158 4.4E-63 T 09-03-2017 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 RG43_RS23725 008d79e35bd2270915d40e060cca3867 158 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1 147 8.1E-53 T 09-03-2017 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 RG43_RS07915 0585f51b3e22941591ca55e0f0c27d96 387 TIGRFAM TIGR00998 8a0101: efflux pump membrane protein 14 338 4.9E-147 T 09-03-2017 IPR005694 Efflux pump membrane protein Emr GO:0006855|GO:0015238 RG43_RS07915 0585f51b3e22941591ca55e0f0c27d96 387 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 57 285 1.0E-13 T 09-03-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RG43_RS07915 0585f51b3e22941591ca55e0f0c27d96 387 Pfam PF00529 HlyD membrane-fusion protein of T1SS 30 340 1.7E-16 T 09-03-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RG43_RS07915 0585f51b3e22941591ca55e0f0c27d96 387 SUPERFAMILY SSF111369 187 260 1.7E-8 T 09-03-2017 RG43_RS07915 0585f51b3e22941591ca55e0f0c27d96 387 SUPERFAMILY SSF111369 105 154 1.7E-8 T 09-03-2017 RG43_RS07915 0585f51b3e22941591ca55e0f0c27d96 387 Gene3D G3DSA:2.40.50.100 57 87 1.6E-16 T 09-03-2017 RG43_RS07915 0585f51b3e22941591ca55e0f0c27d96 387 Gene3D G3DSA:2.40.50.100 208 241 1.6E-16 T 09-03-2017 RG43_RS08745 e76f0980c0d95bfa6053de9f226f7748 164 Gene3D G3DSA:3.30.70.20 36 72 2.0E-10 T 09-03-2017 RG43_RS08745 e76f0980c0d95bfa6053de9f226f7748 164 Pfam PF00037 4Fe-4S binding domain 136 157 4.9E-7 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS08745 e76f0980c0d95bfa6053de9f226f7748 164 Gene3D G3DSA:3.30.70.20 73 159 1.9E-13 T 09-03-2017 RG43_RS08745 e76f0980c0d95bfa6053de9f226f7748 164 Pfam PF13187 4Fe-4S dicluster domain 37 82 2.8E-7 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS08745 e76f0980c0d95bfa6053de9f226f7748 164 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 69 80 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS08745 e76f0980c0d95bfa6053de9f226f7748 164 Pfam PF12800 4Fe-4S binding domain 101 118 0.6 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS08745 e76f0980c0d95bfa6053de9f226f7748 164 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 141 152 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS08745 e76f0980c0d95bfa6053de9f226f7748 164 SUPERFAMILY SSF54862 33 158 2.65E-17 T 09-03-2017 RG43_RS08745 e76f0980c0d95bfa6053de9f226f7748 164 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 7 157 2.7E-74 T 09-03-2017 IPR004496 Ferredoxin-type protein NapF GO:0005506|GO:0009055 RG43_RS08745 e76f0980c0d95bfa6053de9f226f7748 164 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 37 48 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS25480 17be33986353f1d5490ae097345f8a99 456 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 6 455 5.2E-208 T 09-03-2017 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 RG43_RS25480 17be33986353f1d5490ae097345f8a99 456 Gene3D G3DSA:2.160.10.10 245 324 8.1E-19 T 09-03-2017 RG43_RS25480 17be33986353f1d5490ae097345f8a99 456 SUPERFAMILY SSF53448 5 252 9.6E-67 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS25480 17be33986353f1d5490ae097345f8a99 456 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 5 452 43.135 T 09-03-2017 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 RG43_RS25480 17be33986353f1d5490ae097345f8a99 456 Gene3D G3DSA:3.90.550.10 3 244 4.2E-71 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS25480 17be33986353f1d5490ae097345f8a99 456 Gene3D G3DSA:2.160.10.10 325 455 6.8E-34 T 09-03-2017 RG43_RS25480 17be33986353f1d5490ae097345f8a99 456 SUPERFAMILY SSF51161 255 438 2.62E-51 T 09-03-2017 IPR011004 Trimeric LpxA-like RG43_RS25480 17be33986353f1d5490ae097345f8a99 456 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 403 431 - T 09-03-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 RG43_RS25480 17be33986353f1d5490ae097345f8a99 456 Pfam PF12804 MobA-like NTP transferase domain 8 122 3.2E-20 T 09-03-2017 IPR025877 MobA-like NTP transferase RG43_RS25480 17be33986353f1d5490ae097345f8a99 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 395 429 1.2E-7 T 09-03-2017 IPR001451 Hexapeptide repeat RG43_RS25480 17be33986353f1d5490ae097345f8a99 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 353 382 0.0029 T 09-03-2017 IPR001451 Hexapeptide repeat RG43_RS25480 17be33986353f1d5490ae097345f8a99 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 267 300 5.9E-6 T 09-03-2017 IPR001451 Hexapeptide repeat RG43_RS01420 8675347fe47de67ba6ab1aa2438107e8 489 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 9 483 2.3E-183 T 09-03-2017 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 RG43_RS01420 8675347fe47de67ba6ab1aa2438107e8 489 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 145 157 - T 09-03-2017 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 RG43_RS01420 8675347fe47de67ba6ab1aa2438107e8 489 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 70 94 - T 09-03-2017 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 RG43_RS01420 8675347fe47de67ba6ab1aa2438107e8 489 Hamap MF_01879 Dipeptide and tripeptide permease B [dtpB]. 3 486 45.477 T 09-03-2017 IPR023778 Amino acid/peptide transporter family, dipeptide/tripeptide permease B RG43_RS01420 8675347fe47de67ba6ab1aa2438107e8 489 Gene3D G3DSA:1.20.1250.20 279 477 4.7E-6 T 09-03-2017 RG43_RS01420 8675347fe47de67ba6ab1aa2438107e8 489 SUPERFAMILY SSF103473 244 481 8.37E-27 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS01420 8675347fe47de67ba6ab1aa2438107e8 489 SUPERFAMILY SSF103473 8 200 8.37E-27 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS01420 8675347fe47de67ba6ab1aa2438107e8 489 Gene3D G3DSA:1.20.1250.20 14 192 1.6E-15 T 09-03-2017 RG43_RS01420 8675347fe47de67ba6ab1aa2438107e8 489 Pfam PF00854 POT family 82 443 6.5E-99 T 09-03-2017 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 RG43_RS00680 1a8711b9d137a136af7ca5a23ee78b64 339 SUPERFAMILY SSF51735 8 182 4.4E-53 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS00680 1a8711b9d137a136af7ca5a23ee78b64 339 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 6 326 38.955 T 09-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 RG43_RS00680 1a8711b9d137a136af7ca5a23ee78b64 339 Gene3D G3DSA:1.10.1040.10 184 330 2.3E-58 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RG43_RS00680 1a8711b9d137a136af7ca5a23ee78b64 339 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 192 213 - T 09-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 RG43_RS00680 1a8711b9d137a136af7ca5a23ee78b64 339 SUPERFAMILY SSF48179 184 335 8.16E-58 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RG43_RS00680 1a8711b9d137a136af7ca5a23ee78b64 339 PIRSF PIRSF000114 1 336 1.8E-101 T 09-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 RG43_RS00680 1a8711b9d137a136af7ca5a23ee78b64 339 Gene3D G3DSA:3.40.50.720 9 182 6.7E-58 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS00680 1a8711b9d137a136af7ca5a23ee78b64 339 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 184 323 1.4E-52 T 09-03-2017 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 RG43_RS00680 1a8711b9d137a136af7ca5a23ee78b64 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 136 156 8.7E-42 T 09-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 RG43_RS00680 1a8711b9d137a136af7ca5a23ee78b64 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 202 226 8.7E-42 T 09-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 RG43_RS00680 1a8711b9d137a136af7ca5a23ee78b64 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 60 87 8.7E-42 T 09-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 RG43_RS00680 1a8711b9d137a136af7ca5a23ee78b64 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 10 27 8.7E-42 T 09-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 RG43_RS00680 1a8711b9d137a136af7ca5a23ee78b64 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 177 201 8.7E-42 T 09-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 RG43_RS00680 1a8711b9d137a136af7ca5a23ee78b64 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 242 259 8.7E-42 T 09-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 RG43_RS00680 1a8711b9d137a136af7ca5a23ee78b64 339 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 8 163 5.9E-52 T 09-03-2017 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 RG43_RS10825 f0de9cfb96ccf7ba4fb36e41e06ea852 136 Pfam PF02561 Flagellar protein FliS 8 124 2.6E-34 T 09-03-2017 IPR003713 Flagellar protein FliS GO:0044780 RG43_RS10825 f0de9cfb96ccf7ba4fb36e41e06ea852 136 PIRSF PIRSF039090 1 135 2.3E-44 T 09-03-2017 IPR003713 Flagellar protein FliS GO:0044780 RG43_RS10825 f0de9cfb96ccf7ba4fb36e41e06ea852 136 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 129 8.6E-59 T 09-03-2017 IPR003713 Flagellar protein FliS GO:0044780 RG43_RS10825 f0de9cfb96ccf7ba4fb36e41e06ea852 136 SUPERFAMILY SSF101116 8 124 5.49E-34 T 09-03-2017 IPR003713 Flagellar protein FliS GO:0044780 RG43_RS10825 f0de9cfb96ccf7ba4fb36e41e06ea852 136 Gene3D G3DSA:1.20.120.340 8 124 5.0E-38 T 09-03-2017 IPR003713 Flagellar protein FliS GO:0044780 RG43_RS02125 e5f05b7413c1a418d324c8a0490323e1 393 Gene3D G3DSA:1.20.1250.20 208 381 7.6E-13 T 09-03-2017 RG43_RS02125 e5f05b7413c1a418d324c8a0490323e1 393 Gene3D G3DSA:1.20.1250.20 6 183 1.7E-16 T 09-03-2017 RG43_RS02125 e5f05b7413c1a418d324c8a0490323e1 393 Pfam PF07690 Major Facilitator Superfamily 14 319 4.8E-22 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS02125 e5f05b7413c1a418d324c8a0490323e1 393 Hamap MF_01044 Protein TsgA [tsgA]. 1 388 31.166 T 09-03-2017 IPR023528 Major facilitator superfamily transporter, TsgA RG43_RS02125 e5f05b7413c1a418d324c8a0490323e1 393 SUPERFAMILY SSF103473 4 385 6.15E-40 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS16980 ea6effe23b82c9a670bc4d4a01174cd1 127 Pfam PF06530 Phage antitermination protein Q 2 123 4.1E-30 T 09-03-2017 IPR010534 Bacteriophage 933W, GpQ GO:0003677|GO:0060567 RG43_RS06095 510fabad807e781841e74cb44211aea1 475 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 28 434 1.3E-212 T 09-03-2017 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 RG43_RS06095 510fabad807e781841e74cb44211aea1 475 SUPERFAMILY SSF52540 23 236 1.48E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS06095 510fabad807e781841e74cb44211aea1 475 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 19 475 53.816 T 09-03-2017 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 RG43_RS06095 510fabad807e781841e74cb44211aea1 475 Gene3D G3DSA:2.40.30.10 244 359 2.7E-16 T 09-03-2017 RG43_RS06095 510fabad807e781841e74cb44211aea1 475 Pfam PF00009 Elongation factor Tu GTP binding domain 27 231 1.7E-42 T 09-03-2017 RG43_RS06095 510fabad807e781841e74cb44211aea1 475 Gene3D G3DSA:3.40.50.300 21 236 9.4E-67 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS06095 510fabad807e781841e74cb44211aea1 475 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 34 214 1.6E-13 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 RG43_RS06095 510fabad807e781841e74cb44211aea1 475 PRINTS PR00315 GTP-binding elongation factor signature 126 137 6.2E-13 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RG43_RS06095 510fabad807e781841e74cb44211aea1 475 PRINTS PR00315 GTP-binding elongation factor signature 163 172 6.2E-13 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RG43_RS06095 510fabad807e781841e74cb44211aea1 475 PRINTS PR00315 GTP-binding elongation factor signature 110 120 6.2E-13 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RG43_RS06095 510fabad807e781841e74cb44211aea1 475 PRINTS PR00315 GTP-binding elongation factor signature 29 42 6.2E-13 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RG43_RS06095 510fabad807e781841e74cb44211aea1 475 PRINTS PR00315 GTP-binding elongation factor signature 90 98 6.2E-13 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RG43_RS06095 510fabad807e781841e74cb44211aea1 475 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 83 98 - T 09-03-2017 IPR031157 Tr-type G domain, conserved site RG43_RS06095 510fabad807e781841e74cb44211aea1 475 SUPERFAMILY SSF50465 336 435 7.19E-30 T 09-03-2017 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RG43_RS06095 510fabad807e781841e74cb44211aea1 475 SUPERFAMILY SSF50447 244 328 9.5E-22 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain RG43_RS22770 b715da47d04f9735194c841a1b3d28d5 119 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 1 106 8.0E-47 T 09-03-2017 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 RG43_RS22770 b715da47d04f9735194c841a1b3d28d5 119 Pfam PF02313 Fumarate reductase subunit D 6 116 6.5E-52 T 09-03-2017 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 RG43_RS22770 b715da47d04f9735194c841a1b3d28d5 119 Gene3D G3DSA:1.20.1300.10 1 119 1.5E-55 T 09-03-2017 RG43_RS22770 b715da47d04f9735194c841a1b3d28d5 119 SUPERFAMILY SSF81343 1 119 2.62E-53 T 09-03-2017 RG43_RS22770 b715da47d04f9735194c841a1b3d28d5 119 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 2 119 27.602 T 09-03-2017 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 RG43_RS22770 b715da47d04f9735194c841a1b3d28d5 119 PIRSF PIRSF000179 1 119 3.4E-53 T 09-03-2017 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 RG43_RS03685 b563bdd4032fdc0165977f2931914329 175 Pfam PF02794 RTX toxin acyltransferase family 23 149 2.7E-44 T 09-03-2017 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 RG43_RS03685 b563bdd4032fdc0165977f2931914329 175 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 145 166 3.5E-11 T 09-03-2017 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 RG43_RS03685 b563bdd4032fdc0165977f2931914329 175 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 90 112 3.5E-11 T 09-03-2017 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 RG43_RS03685 b563bdd4032fdc0165977f2931914329 175 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 25 41 3.5E-11 T 09-03-2017 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 RG43_RS20235 76a1be5e9252e3f9dd1ae8a911e34570 721 Gene3D G3DSA:2.170.130.10 22 176 6.2E-23 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RG43_RS20235 76a1be5e9252e3f9dd1ae8a911e34570 721 Gene3D G3DSA:2.40.170.20 180 721 8.2E-100 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RG43_RS20235 76a1be5e9252e3f9dd1ae8a911e34570 721 Pfam PF07715 TonB-dependent Receptor Plug Domain 68 164 3.8E-13 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RG43_RS20235 76a1be5e9252e3f9dd1ae8a911e34570 721 SUPERFAMILY SSF56935 26 721 6.0E-98 T 09-03-2017 RG43_RS20235 76a1be5e9252e3f9dd1ae8a911e34570 721 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 69 721 4.9E-86 T 09-03-2017 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 RG43_RS20235 76a1be5e9252e3f9dd1ae8a911e34570 721 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 704 721 - T 09-03-2017 IPR010917 TonB-dependent receptor, conserved site RG43_RS20235 76a1be5e9252e3f9dd1ae8a911e34570 721 Pfam PF00593 TonB dependent receptor 476 719 1.6E-22 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RG43_RS10835 9ef3b002b464b4259e59b3bec288c7a8 349 PRINTS PR00207 Flagellin signature 76 95 8.0E-32 T 09-03-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 RG43_RS10835 9ef3b002b464b4259e59b3bec288c7a8 349 PRINTS PR00207 Flagellin signature 37 54 8.0E-32 T 09-03-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 RG43_RS10835 9ef3b002b464b4259e59b3bec288c7a8 349 PRINTS PR00207 Flagellin signature 111 134 8.0E-32 T 09-03-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 RG43_RS10835 9ef3b002b464b4259e59b3bec288c7a8 349 Pfam PF00700 Bacterial flagellin C-terminal helical region 263 347 3.1E-30 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 RG43_RS10835 9ef3b002b464b4259e59b3bec288c7a8 349 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.1E-45 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 RG43_RS10835 9ef3b002b464b4259e59b3bec288c7a8 349 SUPERFAMILY SSF64518 1 348 1.12E-104 T 09-03-2017 RG43_RS10835 9ef3b002b464b4259e59b3bec288c7a8 349 Gene3D G3DSA:1.20.1330.10 54 170 7.2E-59 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 RG43_RS10835 9ef3b002b464b4259e59b3bec288c7a8 349 Gene3D G3DSA:1.20.1330.10 250 304 7.2E-59 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 RG43_RS16520 1ccbe310f2db88337c9ebcba6f80bc28 419 Pfam PF07350 Protein of unknown function (DUF1479) 13 417 4.4E-141 T 09-03-2017 IPR010856 Protein of unknown function DUF1479 RG43_RS16520 1ccbe310f2db88337c9ebcba6f80bc28 419 Gene3D G3DSA:2.60.120.330 4 418 1.8E-159 T 09-03-2017 IPR027443 Isopenicillin N synthase-like RG43_RS16520 1ccbe310f2db88337c9ebcba6f80bc28 419 SUPERFAMILY SSF51197 3 417 1.46E-150 T 09-03-2017 RG43_RS14805 d10142192cc7f0617f3889232fd37ba3 403 SMART SM01034 2 94 1.1E-37 T 09-03-2017 IPR007024 BLUF domain GO:0009882|GO:0071949 RG43_RS14805 d10142192cc7f0617f3889232fd37ba3 403 Pfam PF04940 Sensors of blue-light using FAD 2 92 1.4E-24 T 09-03-2017 IPR007024 BLUF domain GO:0009882|GO:0071949 RG43_RS14805 d10142192cc7f0617f3889232fd37ba3 403 SMART SM00052 145 394 9.3E-61 T 09-03-2017 IPR001633 EAL domain RG43_RS14805 d10142192cc7f0617f3889232fd37ba3 403 Gene3D G3DSA:3.20.20.450 175 389 6.1E-41 T 09-03-2017 IPR001633 EAL domain RG43_RS14805 d10142192cc7f0617f3889232fd37ba3 403 Pfam PF00563 EAL domain 173 388 1.8E-48 T 09-03-2017 IPR001633 EAL domain RG43_RS14805 d10142192cc7f0617f3889232fd37ba3 403 SUPERFAMILY SSF54975 1 132 5.89E-36 T 09-03-2017 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RG43_RS14805 d10142192cc7f0617f3889232fd37ba3 403 SUPERFAMILY SSF141868 173 389 7.59E-44 T 09-03-2017 IPR001633 EAL domain RG43_RS17990 78ecdf84eb35f5434c3112bafd3fa4f9 552 SUPERFAMILY SSF55785 223 277 3.84E-8 T 09-03-2017 IPR000014 PAS domain RG43_RS17990 78ecdf84eb35f5434c3112bafd3fa4f9 552 SUPERFAMILY SSF55874 409 546 9.95E-25 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS17990 78ecdf84eb35f5434c3112bafd3fa4f9 552 Pfam PF17203 Single cache domain 3 67 173 1.4E-21 T 09-03-2017 IPR033463 Single cache domain 3 RG43_RS17990 78ecdf84eb35f5434c3112bafd3fa4f9 552 SMART SM00387 428 541 3.7E-22 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS17990 78ecdf84eb35f5434c3112bafd3fa4f9 552 SUPERFAMILY SSF103190 52 178 3.14E-33 T 09-03-2017 IPR029151 Periplasmic sensor domain-like RG43_RS17990 78ecdf84eb35f5434c3112bafd3fa4f9 552 Gene3D G3DSA:1.10.287.130 318 387 6.5E-25 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS17990 78ecdf84eb35f5434c3112bafd3fa4f9 552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 501 519 9.9E-9 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS17990 78ecdf84eb35f5434c3112bafd3fa4f9 552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 497 9.9E-9 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS17990 78ecdf84eb35f5434c3112bafd3fa4f9 552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 483 9.9E-9 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS17990 78ecdf84eb35f5434c3112bafd3fa4f9 552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 525 538 9.9E-9 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS17990 78ecdf84eb35f5434c3112bafd3fa4f9 552 SMART SM00091 222 292 9.6E-9 T 09-03-2017 IPR000014 PAS domain RG43_RS17990 78ecdf84eb35f5434c3112bafd3fa4f9 552 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 429 539 1.2E-14 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS17990 78ecdf84eb35f5434c3112bafd3fa4f9 552 Pfam PF00989 PAS fold 225 285 3.9E-5 T 09-03-2017 IPR013767 PAS fold GO:0006355 RG43_RS17990 78ecdf84eb35f5434c3112bafd3fa4f9 552 Gene3D G3DSA:3.30.450.20 223 288 2.0E-7 T 09-03-2017 RG43_RS17990 78ecdf84eb35f5434c3112bafd3fa4f9 552 Gene3D G3DSA:3.30.565.10 423 542 8.2E-24 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS17990 78ecdf84eb35f5434c3112bafd3fa4f9 552 SUPERFAMILY SSF55890 332 376 3.4E-8 T 09-03-2017 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 RG43_RS17990 78ecdf84eb35f5434c3112bafd3fa4f9 552 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 330 373 8.1E-8 T 09-03-2017 RG43_RS17990 78ecdf84eb35f5434c3112bafd3fa4f9 552 Gene3D G3DSA:3.30.450.20 43 179 1.8E-46 T 09-03-2017 RG43_RS06225 b547137867e42eca27872a20626616b7 336 SUPERFAMILY SSF56042 163 331 1.5E-39 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain RG43_RS06225 b547137867e42eca27872a20626616b7 336 PIRSF PIRSF005644 1 336 6.4E-123 T 09-03-2017 IPR011854 Hydrogenase expression/formation protein HypE RG43_RS06225 b547137867e42eca27872a20626616b7 336 SUPERFAMILY SSF55326 3 156 1.24E-32 T 09-03-2017 RG43_RS06225 b547137867e42eca27872a20626616b7 336 Pfam PF00586 AIR synthase related protein, N-terminal domain 53 152 1.4E-15 T 09-03-2017 IPR016188 PurM-like, N-terminal domain RG43_RS06225 b547137867e42eca27872a20626616b7 336 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 3 336 4.4E-141 T 09-03-2017 IPR011854 Hydrogenase expression/formation protein HypE RG43_RS06225 b547137867e42eca27872a20626616b7 336 Gene3D G3DSA:3.90.650.10 165 316 2.6E-24 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain RG43_RS06225 b547137867e42eca27872a20626616b7 336 Gene3D G3DSA:3.30.1330.10 15 155 1.6E-24 T 09-03-2017 IPR016188 PurM-like, N-terminal domain RG43_RS06225 b547137867e42eca27872a20626616b7 336 Pfam PF02769 AIR synthase related protein, C-terminal domain 166 313 8.9E-26 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain RG43_RS24085 091bb03c9d1e8734ac0da1ad6ed169e2 70 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 09-03-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS24085 091bb03c9d1e8734ac0da1ad6ed169e2 70 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.0E-22 T 09-03-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS24085 091bb03c9d1e8734ac0da1ad6ed169e2 70 PRINTS PR01249 Ribosomal protein L31 signature 31 46 1.0E-22 T 09-03-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS24085 091bb03c9d1e8734ac0da1ad6ed169e2 70 PRINTS PR01249 Ribosomal protein L31 signature 46 64 1.0E-22 T 09-03-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS24085 091bb03c9d1e8734ac0da1ad6ed169e2 70 Pfam PF01197 Ribosomal protein L31 1 65 6.2E-31 T 09-03-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS24085 091bb03c9d1e8734ac0da1ad6ed169e2 70 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 32.097 T 09-03-2017 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS24085 091bb03c9d1e8734ac0da1ad6ed169e2 70 SUPERFAMILY SSF143800 1 66 1.02E-27 T 09-03-2017 RG43_RS24085 091bb03c9d1e8734ac0da1ad6ed169e2 70 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 66 6.9E-35 T 09-03-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS11540 4c553198e7900ab1cdf0390884503954 266 Pfam PF03609 PTS system sorbose-specific iic component 6 237 3.8E-76 T 09-03-2017 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 RG43_RS11540 4c553198e7900ab1cdf0390884503954 266 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 1 266 1.9E-132 T 09-03-2017 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 RG43_RS24435 dfa9e01deeb9b70c1ffa4b789a91d914 166 Pfam PF07813 LTXXQ motif family protein 41 135 7.4E-22 T 09-03-2017 IPR012899 LTXXQ motif family protein GO:0042597 RG43_RS24435 dfa9e01deeb9b70c1ffa4b789a91d914 166 PIRSF PIRSF034445 2 146 5.5E-31 T 09-03-2017 IPR012899 LTXXQ motif family protein GO:0042597 RG43_RS00135 b1ade2605e67e22438e2153096871ef3 334 Pfam PF03050 Transposase IS66 family 187 328 7.4E-46 T 09-03-2017 IPR004291 Transposase, IS66 RG43_RS00135 b1ade2605e67e22438e2153096871ef3 334 Pfam PF13007 Transposase C of IS166 homeodomain 46 121 2.4E-12 T 09-03-2017 IPR024463 Transposase TnpC, homeodomain RG43_RS00135 b1ade2605e67e22438e2153096871ef3 334 Pfam PF13005 zinc-finger binding domain of transposase IS66 128 172 3.7E-14 T 09-03-2017 IPR024474 Zinc-finger binding domain of transposase IS66 RG43_RS09840 235cc153b4c4907c56acacf47acf3e16 38 Pfam PF13817 IS66 C-terminal element 1 31 3.5E-12 T 09-03-2017 RG43_RS12290 bcedc48909225e30e7162029faf75eb5 261 Gene3D G3DSA:1.20.950.20 62 258 3.5E-36 T 09-03-2017 RG43_RS12290 bcedc48909225e30e7162029faf75eb5 261 Pfam PF01292 Prokaryotic cytochrome b561 69 257 3.4E-28 T 09-03-2017 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 RG43_RS12290 bcedc48909225e30e7162029faf75eb5 261 SUPERFAMILY SSF81342 62 259 1.57E-25 T 09-03-2017 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 RG43_RS07555 1faaf5a6deca2bb28fdefd56b45dd097 289 SMART SM00646 118 273 4.0E-66 T 09-03-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 RG43_RS07555 1faaf5a6deca2bb28fdefd56b45dd097 289 SUPERFAMILY SSF53187 200 277 7.85E-55 T 09-03-2017 RG43_RS07555 1faaf5a6deca2bb28fdefd56b45dd097 289 SUPERFAMILY SSF53187 57 152 7.85E-55 T 09-03-2017 RG43_RS07555 1faaf5a6deca2bb28fdefd56b45dd097 289 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 59 273 1.6E-51 T 09-03-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 RG43_RS07555 1faaf5a6deca2bb28fdefd56b45dd097 289 Gene3D G3DSA:3.40.630.40 201 277 4.0E-59 T 09-03-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 RG43_RS07555 1faaf5a6deca2bb28fdefd56b45dd097 289 Gene3D G3DSA:3.40.630.40 57 153 4.0E-59 T 09-03-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 RG43_RS24635 6b8eab3a4fdbe90ba7aaac3a500254e2 262 Gene3D G3DSA:1.10.10.10 8 88 2.4E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS24635 6b8eab3a4fdbe90ba7aaac3a500254e2 262 SMART SM00420 11 63 1.7E-24 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RG43_RS24635 6b8eab3a4fdbe90ba7aaac3a500254e2 262 ProSitePatterns PS00894 DeoR-type HTH domain signature. 11 45 - T 09-03-2017 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 RG43_RS24635 6b8eab3a4fdbe90ba7aaac3a500254e2 262 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 43 61 7.2E-13 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RG43_RS24635 6b8eab3a4fdbe90ba7aaac3a500254e2 262 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 29 43 7.2E-13 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RG43_RS24635 6b8eab3a4fdbe90ba7aaac3a500254e2 262 Gene3D G3DSA:3.40.50.1360 89 218 3.0E-13 T 09-03-2017 RG43_RS24635 6b8eab3a4fdbe90ba7aaac3a500254e2 262 Pfam PF08220 DeoR-like helix-turn-helix domain 11 66 1.8E-23 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RG43_RS24635 6b8eab3a4fdbe90ba7aaac3a500254e2 262 SMART SM01134 77 238 8.6E-58 T 09-03-2017 RG43_RS24635 6b8eab3a4fdbe90ba7aaac3a500254e2 262 SUPERFAMILY SSF46785 9 73 2.93E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS24635 6b8eab3a4fdbe90ba7aaac3a500254e2 262 SUPERFAMILY SSF100950 80 238 1.02E-25 T 09-03-2017 RG43_RS24635 6b8eab3a4fdbe90ba7aaac3a500254e2 262 Pfam PF00455 DeoR C terminal sensor domain 80 236 6.7E-46 T 09-03-2017 IPR014036 DeoR C-terminal sensor domain RG43_RS07405 95e4d0fb0ddf599184fdc7eab0747d5e 375 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 3 375 52.262 T 09-03-2017 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 RG43_RS07405 95e4d0fb0ddf599184fdc7eab0747d5e 375 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 61 70 - T 09-03-2017 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 RG43_RS07405 95e4d0fb0ddf599184fdc7eab0747d5e 375 SUPERFAMILY SSF53187 292 373 1.23E-64 T 09-03-2017 RG43_RS07405 95e4d0fb0ddf599184fdc7eab0747d5e 375 SUPERFAMILY SSF53187 5 178 1.23E-64 T 09-03-2017 RG43_RS07405 95e4d0fb0ddf599184fdc7eab0747d5e 375 Gene3D G3DSA:3.40.630.10 316 373 6.5E-75 T 09-03-2017 RG43_RS07405 95e4d0fb0ddf599184fdc7eab0747d5e 375 Gene3D G3DSA:3.40.630.10 5 187 6.5E-75 T 09-03-2017 RG43_RS07405 95e4d0fb0ddf599184fdc7eab0747d5e 375 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 97 136 - T 09-03-2017 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 RG43_RS07405 95e4d0fb0ddf599184fdc7eab0747d5e 375 Pfam PF07687 Peptidase dimerisation domain 175 282 3.6E-25 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain RG43_RS07405 95e4d0fb0ddf599184fdc7eab0747d5e 375 Pfam PF01546 Peptidase family M20/M25/M40 62 371 6.4E-43 T 09-03-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RG43_RS07405 95e4d0fb0ddf599184fdc7eab0747d5e 375 SUPERFAMILY SSF55031 179 286 2.84E-29 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain RG43_RS07405 95e4d0fb0ddf599184fdc7eab0747d5e 375 Gene3D G3DSA:3.30.70.360 188 288 1.4E-34 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain RG43_RS07405 95e4d0fb0ddf599184fdc7eab0747d5e 375 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 6 373 4.5E-173 T 09-03-2017 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 RG43_RS03025 336b4f05a160e5cc79e6d8ece23f9828 323 Gene3D G3DSA:1.10.600.10 3 322 1.6E-104 T 09-03-2017 IPR008949 Isoprenoid synthase domain RG43_RS03025 336b4f05a160e5cc79e6d8ece23f9828 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 09-03-2017 IPR000092 Polyprenyl synthetase GO:0008299 RG43_RS03025 336b4f05a160e5cc79e6d8ece23f9828 323 SUPERFAMILY SSF48576 6 322 5.76E-101 T 09-03-2017 IPR008949 Isoprenoid synthase domain RG43_RS03025 336b4f05a160e5cc79e6d8ece23f9828 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 09-03-2017 IPR000092 Polyprenyl synthetase GO:0008299 RG43_RS03025 336b4f05a160e5cc79e6d8ece23f9828 323 Pfam PF00348 Polyprenyl synthetase 30 263 9.5E-76 T 09-03-2017 IPR000092 Polyprenyl synthetase GO:0008299 RG43_RS23140 069542d10ca377d3c2d70c55cb722232 149 SUPERFAMILY SSF89623 2 145 1.18E-57 T 09-03-2017 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 RG43_RS23140 069542d10ca377d3c2d70c55cb722232 149 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 3 145 2.9E-77 T 09-03-2017 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 RG43_RS23140 069542d10ca377d3c2d70c55cb722232 149 PIRSF PIRSF005384 2 148 6.1E-61 T 09-03-2017 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 RG43_RS23140 069542d10ca377d3c2d70c55cb722232 149 Pfam PF02502 Ribose/Galactose Isomerase 4 141 2.5E-54 T 09-03-2017 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 RG43_RS23140 069542d10ca377d3c2d70c55cb722232 149 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 4 146 1.3E-63 T 09-03-2017 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 RG43_RS23140 069542d10ca377d3c2d70c55cb722232 149 Gene3D G3DSA:3.40.1400.10 2 148 1.0E-62 T 09-03-2017 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 RG43_RS08065 52ed95ec25452e50b8421f67465c9dc0 436 SUPERFAMILY SSF53901 15 295 2.99E-62 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 RG43_RS08065 52ed95ec25452e50b8421f67465c9dc0 436 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 95 113 - T 09-03-2017 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 RG43_RS08065 52ed95ec25452e50b8421f67465c9dc0 436 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 2 436 75.296 T 09-03-2017 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0005737|GO:0006631|GO:0016042|GO:0016740|GO:0016746 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 RG43_RS08065 52ed95ec25452e50b8421f67465c9dc0 436 Pfam PF02803 Thiolase, C-terminal domain 297 434 3.3E-36 T 09-03-2017 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RG43_RS08065 52ed95ec25452e50b8421f67465c9dc0 436 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 8 436 1.0E-271 T 09-03-2017 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0005737|GO:0006631|GO:0016042|GO:0016740|GO:0016746 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 RG43_RS08065 52ed95ec25452e50b8421f67465c9dc0 436 SUPERFAMILY SSF53901 297 434 9.77E-33 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 RG43_RS08065 52ed95ec25452e50b8421f67465c9dc0 436 ProSitePatterns PS00737 Thiolases signature 2. 382 398 - T 09-03-2017 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 RG43_RS08065 52ed95ec25452e50b8421f67465c9dc0 436 Gene3D G3DSA:3.40.47.10 302 435 7.9E-49 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 RG43_RS08065 52ed95ec25452e50b8421f67465c9dc0 436 Gene3D G3DSA:3.40.47.10 175 220 7.9E-49 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 RG43_RS08065 52ed95ec25452e50b8421f67465c9dc0 436 ProSitePatterns PS00099 Thiolases active site. 417 430 - T 09-03-2017 IPR020610 Thiolase, active site GO:0008152|GO:0016747 RG43_RS08065 52ed95ec25452e50b8421f67465c9dc0 436 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 17 434 6.5E-135 T 09-03-2017 IPR002155 Thiolase GO:0008152|GO:0016747 RG43_RS08065 52ed95ec25452e50b8421f67465c9dc0 436 Pfam PF00108 Thiolase, N-terminal domain 15 288 2.4E-59 T 09-03-2017 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RG43_RS08065 52ed95ec25452e50b8421f67465c9dc0 436 PIRSF PIRSF000429 9 436 1.6E-126 T 09-03-2017 IPR002155 Thiolase GO:0008152|GO:0016747 RG43_RS08065 52ed95ec25452e50b8421f67465c9dc0 436 Gene3D G3DSA:3.40.47.10 221 299 7.6E-50 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 RG43_RS08065 52ed95ec25452e50b8421f67465c9dc0 436 Gene3D G3DSA:3.40.47.10 15 134 7.6E-50 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 RG43_RS18390 2fa638040153f678896c9a3735bf93ce 261 SUPERFAMILY SSF51182 11 261 1.25E-67 T 09-03-2017 IPR011051 RmlC-like cupin domain RG43_RS18390 2fa638040153f678896c9a3735bf93ce 261 Gene3D G3DSA:2.60.120.10 2 260 5.4E-101 T 09-03-2017 IPR014710 RmlC-like jelly roll fold RG43_RS18390 2fa638040153f678896c9a3735bf93ce 261 TIGRFAM TIGR03214 ura-cupin: putative allantoin catabolism protein 3 260 5.2E-116 T 09-03-2017 IPR017627 Conserved hypothetical protein CHP03214, putative allantoin-urate catabolism protein KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 RG43_RS18390 2fa638040153f678896c9a3735bf93ce 261 Pfam PF05899 Protein of unknown function (DUF861) 56 130 4.6E-10 T 09-03-2017 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 RG43_RS18390 2fa638040153f678896c9a3735bf93ce 261 Pfam PF07883 Cupin domain 184 230 2.7E-7 T 09-03-2017 IPR013096 Cupin 2, conserved barrel RG43_RS03420 a6784213cd17fa79c58dda7d61e626b3 298 Gene3D G3DSA:1.10.10.10 7 92 3.1E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS03420 a6784213cd17fa79c58dda7d61e626b3 298 Pfam PF03466 LysR substrate binding domain 96 280 2.2E-18 T 09-03-2017 IPR005119 LysR, substrate-binding RG43_RS03420 a6784213cd17fa79c58dda7d61e626b3 298 SUPERFAMILY SSF46785 8 91 1.69E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS03420 a6784213cd17fa79c58dda7d61e626b3 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 5.0E-16 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS03420 a6784213cd17fa79c58dda7d61e626b3 298 Gene3D G3DSA:3.40.190.10 178 264 5.0E-10 T 09-03-2017 RG43_RS03420 a6784213cd17fa79c58dda7d61e626b3 298 Gene3D G3DSA:3.40.190.10 94 177 4.8E-9 T 09-03-2017 RG43_RS03420 a6784213cd17fa79c58dda7d61e626b3 298 SUPERFAMILY SSF53850 93 288 1.38E-23 T 09-03-2017 RG43_RS17220 325cb7c5269d14c0d53593362b5dfad8 348 SUPERFAMILY SSF54197 179 345 2.38E-59 T 09-03-2017 IPR011146 HIT-like domain GO:0003824 RG43_RS17220 325cb7c5269d14c0d53593362b5dfad8 348 Gene3D G3DSA:3.30.428.10 45 175 1.5E-57 T 09-03-2017 IPR011146 HIT-like domain GO:0003824 RG43_RS17220 325cb7c5269d14c0d53593362b5dfad8 348 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 183 345 7.3E-73 T 09-03-2017 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 RG43_RS17220 325cb7c5269d14c0d53593362b5dfad8 348 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 1 347 1.3E-215 T 09-03-2017 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 RG43_RS17220 325cb7c5269d14c0d53593362b5dfad8 348 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 3 176 5.2E-70 T 09-03-2017 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 RG43_RS17220 325cb7c5269d14c0d53593362b5dfad8 348 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 151 168 - T 09-03-2017 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 RG43_RS17220 325cb7c5269d14c0d53593362b5dfad8 348 SUPERFAMILY SSF54197 3 177 5.27E-73 T 09-03-2017 IPR011146 HIT-like domain GO:0003824 RG43_RS17220 325cb7c5269d14c0d53593362b5dfad8 348 PIRSF PIRSF000808 1 341 2.5E-129 T 09-03-2017 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 RG43_RS17220 325cb7c5269d14c0d53593362b5dfad8 348 Gene3D G3DSA:3.30.428.10 176 345 2.3E-80 T 09-03-2017 IPR011146 HIT-like domain GO:0003824 RG43_RS09635 d87414c34b91c7cfbeeb29ffe3ace45d 297 Pfam PF00483 Nucleotidyl transferase 5 274 3.9E-21 T 09-03-2017 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 RG43_RS09635 d87414c34b91c7cfbeeb29ffe3ace45d 297 Gene3D G3DSA:3.90.550.10 4 276 5.7E-65 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS09635 d87414c34b91c7cfbeeb29ffe3ace45d 297 TIGRFAM TIGR01105 galF: regulatory protein GalF 1 297 4.3E-208 T 09-03-2017 IPR005774 UTP-glucose pyrophosphorylase, regulatory subunit GO:0006011|GO:0030234 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 RG43_RS09635 d87414c34b91c7cfbeeb29ffe3ace45d 297 SUPERFAMILY SSF53448 2 283 1.13E-57 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS11935 e50988174a047faa057f9a6d0fa0d53b 106 Gene3D G3DSA:3.40.50.270 1 103 1.7E-35 T 09-03-2017 RG43_RS11935 e50988174a047faa057f9a6d0fa0d53b 106 TIGRFAM TIGR00853 pts-lac: PTS system, lactose/cellobiose family IIB component 1 94 1.5E-34 T 09-03-2017 IPR013012 Phosphotransferase system, EIIB component, type 3 GO:0008982|GO:0009401 RG43_RS11935 e50988174a047faa057f9a6d0fa0d53b 106 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 94 8.6E-16 T 09-03-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RG43_RS11935 e50988174a047faa057f9a6d0fa0d53b 106 SUPERFAMILY SSF52794 4 102 1.33E-32 T 09-03-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RG43_RS19245 4e1d2ac897ffaefbf436d8f6fc6ea517 293 PRINTS PR00111 Alpha/beta hydrolase fold signature 129 142 2.8E-24 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 RG43_RS19245 4e1d2ac897ffaefbf436d8f6fc6ea517 293 PRINTS PR00111 Alpha/beta hydrolase fold signature 236 250 2.8E-24 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 RG43_RS19245 4e1d2ac897ffaefbf436d8f6fc6ea517 293 PRINTS PR00111 Alpha/beta hydrolase fold signature 70 85 2.8E-24 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 RG43_RS19245 4e1d2ac897ffaefbf436d8f6fc6ea517 293 PRINTS PR00111 Alpha/beta hydrolase fold signature 115 128 2.8E-24 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 RG43_RS19245 4e1d2ac897ffaefbf436d8f6fc6ea517 293 Gene3D G3DSA:3.40.50.1820 13 291 1.9E-61 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS19245 4e1d2ac897ffaefbf436d8f6fc6ea517 293 PRINTS PR00412 Epoxide hydrolase signature 129 142 4.1E-6 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 RG43_RS19245 4e1d2ac897ffaefbf436d8f6fc6ea517 293 PRINTS PR00412 Epoxide hydrolase signature 70 85 4.1E-6 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 RG43_RS19245 4e1d2ac897ffaefbf436d8f6fc6ea517 293 PRINTS PR00412 Epoxide hydrolase signature 267 289 4.1E-6 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 RG43_RS19245 4e1d2ac897ffaefbf436d8f6fc6ea517 293 Pfam PF12697 Alpha/beta hydrolase family 43 284 2.1E-21 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 RG43_RS19245 4e1d2ac897ffaefbf436d8f6fc6ea517 293 Hamap MF_01654 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase [mhpC]. 7 292 70.995 T 09-03-2017 IPR023791 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase GO:0005737|GO:0016787|GO:0018771|GO:0019439|GO:0042803 KEGG: 00360+3.7.1.14|MetaCyc: PWY-6690 RG43_RS19245 4e1d2ac897ffaefbf436d8f6fc6ea517 293 SUPERFAMILY SSF53474 27 291 3.72E-60 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS02035 ad64cec4eb7f19a532f05cb4e3f501d8 225 SUPERFAMILY SSF51366 3 218 1.04E-76 T 09-03-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RG43_RS02035 ad64cec4eb7f19a532f05cb4e3f501d8 225 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 09-03-2017 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RG43_RS02035 ad64cec4eb7f19a532f05cb4e3f501d8 225 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 1.9E-96 T 09-03-2017 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RG43_RS02035 ad64cec4eb7f19a532f05cb4e3f501d8 225 Gene3D G3DSA:3.20.20.70 1 221 6.3E-95 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS02035 ad64cec4eb7f19a532f05cb4e3f501d8 225 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 7.5E-92 T 09-03-2017 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RG43_RS02035 ad64cec4eb7f19a532f05cb4e3f501d8 225 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 09-03-2017 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RG43_RS02035 ad64cec4eb7f19a532f05cb4e3f501d8 225 PIRSF PIRSF001461 1 225 7.8E-107 T 09-03-2017 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RG43_RS21640 b5048c27e5d8b626f4dd320a5d519954 214 Pfam PF10144 Bacterial virulence factor haemolysin 1 160 5.2E-67 T 09-03-2017 IPR019305 Uncharacterised protein family Smp RG43_RS07585 fd3b2a42eb3f4f5cb24d1aac145f7514 474 Gene3D G3DSA:3.30.1360.60 7 84 9.2E-21 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RG43_RS07585 fd3b2a42eb3f4f5cb24d1aac145f7514 474 SUPERFAMILY SSF55604 9 82 8.24E-17 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RG43_RS07585 fd3b2a42eb3f4f5cb24d1aac145f7514 474 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 22 39 - T 09-03-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 RG43_RS07585 fd3b2a42eb3f4f5cb24d1aac145f7514 474 Pfam PF00367 phosphotransferase system, EIIB 13 44 1.5E-12 T 09-03-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 RG43_RS07585 fd3b2a42eb3f4f5cb24d1aac145f7514 474 Pfam PF02378 Phosphotransferase system, EIIC 120 401 3.5E-41 T 09-03-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 RG43_RS19230 8327fcf97e09d7b546b42d829604c610 337 Gene3D G3DSA:3.20.20.70 4 262 1.5E-58 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS19230 8327fcf97e09d7b546b42d829604c610 337 ProDom PD005364 ALDOLASE 4-HYDROXY-2-OXOVALERATE LYASE PYRUVATE 4.1.3.- PLASMID HMG-COA LYASE-LIKE TRANSFERASE HOA 272 335 4.0E-30 T 09-03-2017 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 RG43_RS19230 8327fcf97e09d7b546b42d829604c610 337 TIGRFAM TIGR03217 4OH_2_O_val_ald: 4-hydroxy-2-oxovalerate aldolase 4 336 1.6E-181 T 09-03-2017 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 RG43_RS19230 8327fcf97e09d7b546b42d829604c610 337 Gene3D G3DSA:1.10.8.60 275 336 1.6E-33 T 09-03-2017 RG43_RS19230 8327fcf97e09d7b546b42d829604c610 337 Pfam PF00682 HMGL-like 6 262 1.6E-76 T 09-03-2017 IPR000891 Pyruvate carboxyltransferase GO:0003824 RG43_RS19230 8327fcf97e09d7b546b42d829604c610 337 SUPERFAMILY SSF89000 288 335 3.49E-18 T 09-03-2017 RG43_RS19230 8327fcf97e09d7b546b42d829604c610 337 Hamap MF_01656 4-hydroxy-2-oxovalerate aldolase [mhpE]. 1 337 226.118 T 09-03-2017 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 RG43_RS19230 8327fcf97e09d7b546b42d829604c610 337 Pfam PF07836 DmpG-like communication domain 274 334 9.8E-31 T 09-03-2017 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 RG43_RS19230 8327fcf97e09d7b546b42d829604c610 337 SUPERFAMILY SSF51569 3 276 3.66E-69 T 09-03-2017 RG43_RS24315 7fc84d19c520e1955a27e224b6779800 513 Gene3D G3DSA:3.30.420.10 146 305 1.1E-9 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS24315 7fc84d19c520e1955a27e224b6779800 513 SUPERFAMILY SSF53098 166 309 5.31E-8 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS24315 7fc84d19c520e1955a27e224b6779800 513 Pfam PF00665 Integrase core domain 138 268 6.6E-19 T 09-03-2017 IPR001584 Integrase, catalytic core GO:0015074 RG43_RS26100 7fc84d19c520e1955a27e224b6779800 513 Gene3D G3DSA:3.30.420.10 146 305 1.1E-9 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS26100 7fc84d19c520e1955a27e224b6779800 513 SUPERFAMILY SSF53098 166 309 5.31E-8 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS26100 7fc84d19c520e1955a27e224b6779800 513 Pfam PF00665 Integrase core domain 138 268 6.6E-19 T 09-03-2017 IPR001584 Integrase, catalytic core GO:0015074 RG43_RS03725 7fc84d19c520e1955a27e224b6779800 513 Gene3D G3DSA:3.30.420.10 146 305 1.1E-9 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS03725 7fc84d19c520e1955a27e224b6779800 513 SUPERFAMILY SSF53098 166 309 5.31E-8 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS03725 7fc84d19c520e1955a27e224b6779800 513 Pfam PF00665 Integrase core domain 138 268 6.6E-19 T 09-03-2017 IPR001584 Integrase, catalytic core GO:0015074 RG43_RS11845 3ef16ee5292c76a8851815c0f508a08f 388 Pfam PF13416 Bacterial extracellular solute-binding protein 62 340 1.5E-22 T 09-03-2017 RG43_RS11845 3ef16ee5292c76a8851815c0f508a08f 388 PIRSF PIRSF029172 1 388 4.8E-185 T 09-03-2017 IPR027020 Protein ynjB RG43_RS11845 3ef16ee5292c76a8851815c0f508a08f 388 Gene3D G3DSA:3.40.190.10 155 313 3.1E-6 T 09-03-2017 RG43_RS11845 3ef16ee5292c76a8851815c0f508a08f 388 SUPERFAMILY SSF53850 32 385 4.29E-33 T 09-03-2017 RG43_RS11845 3ef16ee5292c76a8851815c0f508a08f 388 Gene3D G3DSA:3.40.190.10 31 151 2.5E-16 T 09-03-2017 RG43_RS11845 3ef16ee5292c76a8851815c0f508a08f 388 Gene3D G3DSA:3.40.190.10 314 352 2.5E-16 T 09-03-2017 RG43_RS04410 b6e2254344ca0b9edf1789245b9734e5 269 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 220 235 1.5E-12 T 09-03-2017 IPR014032 Peptidase A24A, prepilin type IV, bacterial RG43_RS04410 b6e2254344ca0b9edf1789245b9734e5 269 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 139 156 1.5E-12 T 09-03-2017 IPR014032 Peptidase A24A, prepilin type IV, bacterial RG43_RS04410 b6e2254344ca0b9edf1789245b9734e5 269 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 197 207 1.5E-12 T 09-03-2017 IPR014032 Peptidase A24A, prepilin type IV, bacterial RG43_RS04410 b6e2254344ca0b9edf1789245b9734e5 269 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 208 219 1.5E-12 T 09-03-2017 IPR014032 Peptidase A24A, prepilin type IV, bacterial RG43_RS04410 b6e2254344ca0b9edf1789245b9734e5 269 Pfam PF01478 Type IV leader peptidase family 130 239 1.5E-18 T 09-03-2017 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 RG43_RS04410 b6e2254344ca0b9edf1789245b9734e5 269 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 20 118 2.2E-34 T 09-03-2017 IPR010627 Peptidase A24A, N-terminal RG43_RS26785 b6e2254344ca0b9edf1789245b9734e5 269 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 220 235 1.5E-12 T 09-03-2017 IPR014032 Peptidase A24A, prepilin type IV, bacterial RG43_RS26785 b6e2254344ca0b9edf1789245b9734e5 269 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 139 156 1.5E-12 T 09-03-2017 IPR014032 Peptidase A24A, prepilin type IV, bacterial RG43_RS26785 b6e2254344ca0b9edf1789245b9734e5 269 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 197 207 1.5E-12 T 09-03-2017 IPR014032 Peptidase A24A, prepilin type IV, bacterial RG43_RS26785 b6e2254344ca0b9edf1789245b9734e5 269 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 208 219 1.5E-12 T 09-03-2017 IPR014032 Peptidase A24A, prepilin type IV, bacterial RG43_RS26785 b6e2254344ca0b9edf1789245b9734e5 269 Pfam PF01478 Type IV leader peptidase family 130 239 1.5E-18 T 09-03-2017 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 RG43_RS26785 b6e2254344ca0b9edf1789245b9734e5 269 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 20 118 2.2E-34 T 09-03-2017 IPR010627 Peptidase A24A, N-terminal RG43_RS21035 389a5dad656b70da31de26225cbe2bab 65 Pfam PF03884 Domain of unknown function (DUF329) 7 56 3.6E-25 T 09-03-2017 IPR005584 DNA gyrase inhibitor YacG GO:0008270 RG43_RS21035 389a5dad656b70da31de26225cbe2bab 65 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 3 59 19.691 T 09-03-2017 IPR005584 DNA gyrase inhibitor YacG GO:0008270 RG43_RS21035 389a5dad656b70da31de26225cbe2bab 65 Gene3D G3DSA:3.30.50.10 1 62 8.2E-28 T 09-03-2017 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 RG43_RS21035 389a5dad656b70da31de26225cbe2bab 65 SUPERFAMILY SSF57716 2 62 2.14E-23 T 09-03-2017 RG43_RS26345 44cf9e47574bb9d2d7fda6aff994792b 222 PIRSF PIRSF001488 1 222 1.8E-27 T 09-03-2017 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL RG43_RS26345 44cf9e47574bb9d2d7fda6aff994792b 222 Hamap MF_00932 Thiol:disulfide interchange protein DsbL [dsbL]. 1 222 67.626 T 09-03-2017 IPR028588 Thiol:disulfide interchange protein DsbL RG43_RS26345 44cf9e47574bb9d2d7fda6aff994792b 222 Gene3D G3DSA:3.40.30.10 142 220 1.1E-19 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS26345 44cf9e47574bb9d2d7fda6aff994792b 222 Gene3D G3DSA:3.40.30.10 8 136 8.8E-28 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS26345 44cf9e47574bb9d2d7fda6aff994792b 222 Pfam PF01323 DSBA-like thioredoxin domain 48 201 1.9E-11 T 09-03-2017 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 RG43_RS26345 44cf9e47574bb9d2d7fda6aff994792b 222 SUPERFAMILY SSF52833 28 220 2.24E-26 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS03970 44cf9e47574bb9d2d7fda6aff994792b 222 PIRSF PIRSF001488 1 222 1.8E-27 T 09-03-2017 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL RG43_RS03970 44cf9e47574bb9d2d7fda6aff994792b 222 Hamap MF_00932 Thiol:disulfide interchange protein DsbL [dsbL]. 1 222 67.626 T 09-03-2017 IPR028588 Thiol:disulfide interchange protein DsbL RG43_RS03970 44cf9e47574bb9d2d7fda6aff994792b 222 Gene3D G3DSA:3.40.30.10 142 220 1.1E-19 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS03970 44cf9e47574bb9d2d7fda6aff994792b 222 Gene3D G3DSA:3.40.30.10 8 136 8.8E-28 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS03970 44cf9e47574bb9d2d7fda6aff994792b 222 Pfam PF01323 DSBA-like thioredoxin domain 48 201 1.9E-11 T 09-03-2017 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 RG43_RS03970 44cf9e47574bb9d2d7fda6aff994792b 222 SUPERFAMILY SSF52833 28 220 2.24E-26 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS03055 f95204fe2fc7c5121ae469e673ef6f03 158 PIRSF PIRSF006092 1 158 5.6E-56 T 09-03-2017 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 RG43_RS03055 f95204fe2fc7c5121ae469e673ef6f03 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 156 7.7E-61 T 09-03-2017 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 RG43_RS03055 f95204fe2fc7c5121ae469e673ef6f03 158 Gene3D G3DSA:3.10.50.30 80 157 5.0E-33 T 09-03-2017 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 RG43_RS03055 f95204fe2fc7c5121ae469e673ef6f03 158 SUPERFAMILY SSF46557 3 78 2.35E-29 T 09-03-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RG43_RS03055 f95204fe2fc7c5121ae469e673ef6f03 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 09-03-2017 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 RG43_RS03055 f95204fe2fc7c5121ae469e673ef6f03 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 3.9E-32 T 09-03-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RG43_RS03055 f95204fe2fc7c5121ae469e673ef6f03 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 34.312 T 09-03-2017 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 RG43_RS03055 f95204fe2fc7c5121ae469e673ef6f03 158 SUPERFAMILY SSF54534 81 157 4.05E-25 T 09-03-2017 RG43_RS03055 f95204fe2fc7c5121ae469e673ef6f03 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 09-03-2017 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 RG43_RS03055 f95204fe2fc7c5121ae469e673ef6f03 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 1.2E-29 T 09-03-2017 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 RG43_RS03055 f95204fe2fc7c5121ae469e673ef6f03 158 Gene3D G3DSA:1.10.287.180 1 75 8.8E-36 T 09-03-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RG43_RS06245 e0ef488a5fde62cb45115f4e5aaf1c66 116 PIRSF PIRSF004761 1 116 1.7E-36 T 09-03-2017 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 RG43_RS06245 e0ef488a5fde62cb45115f4e5aaf1c66 116 Hamap MF_00213 Probable hydrogenase nickel incorporation protein HypA [hypA]. 1 114 22.726 T 09-03-2017 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 RG43_RS06245 e0ef488a5fde62cb45115f4e5aaf1c66 116 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 113 8.4E-30 T 09-03-2017 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 RG43_RS06245 e0ef488a5fde62cb45115f4e5aaf1c66 116 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 34 76 - T 09-03-2017 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site RG43_RS06245 e0ef488a5fde62cb45115f4e5aaf1c66 116 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 116 3.0E-44 T 09-03-2017 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 RG43_RS03620 89743da0e8d34386567f46ec472079d8 254 Pfam PF08021 Siderophore-interacting FAD-binding domain 22 132 1.5E-34 T 09-03-2017 IPR013113 FAD-binding 9, siderophore-interacting RG43_RS03620 89743da0e8d34386567f46ec472079d8 254 Gene3D G3DSA:2.40.30.10 11 131 3.3E-34 T 09-03-2017 RG43_RS03620 89743da0e8d34386567f46ec472079d8 254 SUPERFAMILY SSF63380 2 137 1.68E-16 T 09-03-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RG43_RS03620 89743da0e8d34386567f46ec472079d8 254 Pfam PF04954 Siderophore-interacting protein 142 253 6.9E-21 T 09-03-2017 IPR007037 Siderophore-interacting protein RG43_RS03620 89743da0e8d34386567f46ec472079d8 254 Gene3D G3DSA:3.40.50.80 135 252 5.4E-21 T 09-03-2017 RG43_RS21345 7daa81b61497827b5a962d0dce6332dd 428 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 152 167 4.8E-8 T 09-03-2017 RG43_RS21345 7daa81b61497827b5a962d0dce6332dd 428 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 294 309 4.8E-8 T 09-03-2017 RG43_RS21345 7daa81b61497827b5a962d0dce6332dd 428 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 4.8E-8 T 09-03-2017 RG43_RS21345 7daa81b61497827b5a962d0dce6332dd 428 Gene3D G3DSA:3.50.50.60 6 257 9.3E-39 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS21345 7daa81b61497827b5a962d0dce6332dd 428 SUPERFAMILY SSF54373 181 283 6.67E-23 T 09-03-2017 RG43_RS21345 7daa81b61497827b5a962d0dce6332dd 428 Pfam PF01494 FAD binding domain 7 189 3.9E-11 T 09-03-2017 IPR002938 FAD-binding domain GO:0071949 RG43_RS21345 7daa81b61497827b5a962d0dce6332dd 428 SUPERFAMILY SSF51905 4 183 8.44E-43 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS21345 7daa81b61497827b5a962d0dce6332dd 428 SUPERFAMILY SSF51905 283 365 8.44E-43 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS11110 64ce570acdc701b11ad53c308facb500 248 Pfam PF03932 CutC family 3 200 4.2E-85 T 09-03-2017 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 RG43_RS11110 64ce570acdc701b11ad53c308facb500 248 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 2 243 38.875 T 09-03-2017 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 RG43_RS11110 64ce570acdc701b11ad53c308facb500 248 SUPERFAMILY SSF110395 3 245 1.96E-77 T 09-03-2017 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 RG43_RS11110 64ce570acdc701b11ad53c308facb500 248 Gene3D G3DSA:3.20.20.380 1 244 2.8E-94 T 09-03-2017 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 RG43_RS11250 61139b4a5e3cb7e607dfa117fbd5a700 261 Gene3D G3DSA:1.10.3470.10 60 259 3.0E-11 T 09-03-2017 IPR029022 ABC transporter, BtuC-like RG43_RS11250 61139b4a5e3cb7e607dfa117fbd5a700 261 Pfam PF00950 ABC 3 transport family 2 257 1.2E-88 T 09-03-2017 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 RG43_RS11250 61139b4a5e3cb7e607dfa117fbd5a700 261 SUPERFAMILY SSF81345 3 257 7.19E-42 T 09-03-2017 IPR029022 ABC transporter, BtuC-like RG43_RS21540 13fe4258b37e32edda386faa50ec5fdf 21 TIGRFAM TIGR02077 thr_lead_pep: thr operon leader peptide 1 21 2.2E-9 T 09-03-2017 IPR011720 Thr operon leader peptide GO:0009088|GO:0031554|GO:0031556 RG43_RS21540 13fe4258b37e32edda386faa50ec5fdf 21 Pfam PF08254 Threonine leader peptide 1 21 4.9E-10 T 09-03-2017 IPR011720 Thr operon leader peptide GO:0009088|GO:0031554|GO:0031556 RG43_RS21540 13fe4258b37e32edda386faa50ec5fdf 21 Hamap MF_01907 Thr operon leader peptide [thrL]. 1 21 11.934 T 09-03-2017 IPR011720 Thr operon leader peptide GO:0009088|GO:0031554|GO:0031556 RG43_RS20020 a87f0f6823c3dd54440b1dc5bf723897 351 PRINTS PR00183 E.coli/Salmonella-type porin signature 234 251 1.6E-73 T 09-03-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 RG43_RS20020 a87f0f6823c3dd54440b1dc5bf723897 351 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 1.6E-73 T 09-03-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 RG43_RS20020 a87f0f6823c3dd54440b1dc5bf723897 351 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 1.6E-73 T 09-03-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 RG43_RS20020 a87f0f6823c3dd54440b1dc5bf723897 351 PRINTS PR00183 E.coli/Salmonella-type porin signature 262 281 1.6E-73 T 09-03-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 RG43_RS20020 a87f0f6823c3dd54440b1dc5bf723897 351 PRINTS PR00183 E.coli/Salmonella-type porin signature 95 117 1.6E-73 T 09-03-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 RG43_RS20020 a87f0f6823c3dd54440b1dc5bf723897 351 PRINTS PR00183 E.coli/Salmonella-type porin signature 150 172 1.6E-73 T 09-03-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 RG43_RS20020 a87f0f6823c3dd54440b1dc5bf723897 351 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 1.4E-18 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RG43_RS20020 a87f0f6823c3dd54440b1dc5bf723897 351 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 152 163 1.4E-18 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RG43_RS20020 a87f0f6823c3dd54440b1dc5bf723897 351 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 228 240 1.4E-18 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RG43_RS20020 a87f0f6823c3dd54440b1dc5bf723897 351 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 306 323 1.4E-18 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RG43_RS20020 a87f0f6823c3dd54440b1dc5bf723897 351 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 95 105 1.4E-18 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RG43_RS20020 a87f0f6823c3dd54440b1dc5bf723897 351 Pfam PF00267 Gram-negative porin 27 351 5.4E-151 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RG43_RS20020 a87f0f6823c3dd54440b1dc5bf723897 351 SUPERFAMILY SSF56935 22 351 2.78E-80 T 09-03-2017 RG43_RS20020 a87f0f6823c3dd54440b1dc5bf723897 351 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 306 322 - T 09-03-2017 IPR013793 Porin, Gram-negative type, conserved site RG43_RS20020 a87f0f6823c3dd54440b1dc5bf723897 351 Gene3D G3DSA:2.40.160.10 22 351 2.9E-107 T 09-03-2017 IPR023614 Porin domain RG43_RS06335 6073ada7905631237f6a77027f05fb2b 504 SMART SM00382 207 350 1.0E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS06335 6073ada7905631237f6a77027f05fb2b 504 Gene3D G3DSA:3.40.50.300 184 359 4.7E-58 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS06335 6073ada7905631237f6a77027f05fb2b 504 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 211 224 - T 09-03-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RG43_RS06335 6073ada7905631237f6a77027f05fb2b 504 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 400 409 - T 09-03-2017 IPR025944 Sigma-54 interaction domain, conserved site RG43_RS06335 6073ada7905631237f6a77027f05fb2b 504 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 273 288 - T 09-03-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RG43_RS06335 6073ada7905631237f6a77027f05fb2b 504 Gene3D G3DSA:1.10.10.60 411 502 5.3E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS06335 6073ada7905631237f6a77027f05fb2b 504 Gene3D G3DSA:1.10.8.60 360 410 5.0E-18 T 09-03-2017 RG43_RS06335 6073ada7905631237f6a77027f05fb2b 504 Pfam PF01590 GAF domain 23 154 2.0E-9 T 09-03-2017 IPR003018 GAF domain GO:0005515 RG43_RS06335 6073ada7905631237f6a77027f05fb2b 504 SUPERFAMILY SSF46689 451 502 6.72E-7 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS06335 6073ada7905631237f6a77027f05fb2b 504 Gene3D G3DSA:3.30.450.40 7 167 2.1E-16 T 09-03-2017 IPR029016 GAF domain-like RG43_RS06335 6073ada7905631237f6a77027f05fb2b 504 Pfam PF00158 Sigma-54 interaction domain 187 353 4.8E-67 T 09-03-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RG43_RS06335 6073ada7905631237f6a77027f05fb2b 504 SUPERFAMILY SSF55781 22 170 1.37E-17 T 09-03-2017 IPR029016 GAF domain-like RG43_RS06335 6073ada7905631237f6a77027f05fb2b 504 Hamap MF_01314 Anaerobic nitric oxide reductase transcription regulator NorR [norR]. 1 503 61.685 T 09-03-2017 IPR023944 Anaerobic nitric oxide reductase transcription regulator GO:0003700|GO:0006355 RG43_RS06335 6073ada7905631237f6a77027f05fb2b 504 SUPERFAMILY SSF52540 187 421 2.11E-66 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS06335 6073ada7905631237f6a77027f05fb2b 504 SMART SM00065 20 167 1.3E-20 T 09-03-2017 IPR003018 GAF domain GO:0005515 RG43_RS22030 a06650e927bc25906d798a06abf3df0c 447 PIRSF PIRSF002746 1 447 5.9E-146 T 09-03-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 RG43_RS22030 a06650e927bc25906d798a06abf3df0c 447 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 5 446 1.7E-182 T 09-03-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 RG43_RS22030 a06650e927bc25906d798a06abf3df0c 447 Pfam PF02447 GntP family permease 5 446 3.2E-167 T 09-03-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 RG43_RS18175 48f590ad4ac50e318922a98735ffef95 209 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 106 201 3.7E-13 T 09-03-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 RG43_RS18175 48f590ad4ac50e318922a98735ffef95 209 Gene3D G3DSA:3.90.470.20 90 111 4.9E-4 T 09-03-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 RG43_RS18175 48f590ad4ac50e318922a98735ffef95 209 Gene3D G3DSA:3.90.470.20 112 194 5.3E-8 T 09-03-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 RG43_RS18175 48f590ad4ac50e318922a98735ffef95 209 SUPERFAMILY SSF56214 105 207 1.73E-14 T 09-03-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 RG43_RS18175 48f590ad4ac50e318922a98735ffef95 209 PRINTS PR01399 Enterobactin synthetase component D signature 149 165 2.8E-21 T 09-03-2017 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 RG43_RS18175 48f590ad4ac50e318922a98735ffef95 209 PRINTS PR01399 Enterobactin synthetase component D signature 47 67 2.8E-21 T 09-03-2017 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 RG43_RS18175 48f590ad4ac50e318922a98735ffef95 209 PRINTS PR01399 Enterobactin synthetase component D signature 76 94 2.8E-21 T 09-03-2017 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 RG43_RS06450 03cb9b0c58ab382f20aeb9f032942f80 171 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 36.398 T 09-03-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 RG43_RS06450 03cb9b0c58ab382f20aeb9f032942f80 171 SUPERFAMILY SSF63411 4 162 2.38E-67 T 09-03-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RG43_RS06450 03cb9b0c58ab382f20aeb9f032942f80 171 Gene3D G3DSA:3.30.1360.80 1 170 1.9E-76 T 09-03-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 RG43_RS06450 03cb9b0c58ab382f20aeb9f032942f80 171 PIRSF PIRSF006160 1 162 2.5E-66 T 09-03-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 RG43_RS06450 03cb9b0c58ab382f20aeb9f032942f80 171 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 155 5.0E-85 T 09-03-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 RG43_RS06450 03cb9b0c58ab382f20aeb9f032942f80 171 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 152 1.2E-62 T 09-03-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 RG43_RS06450 03cb9b0c58ab382f20aeb9f032942f80 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 1.6E-50 T 09-03-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 RG43_RS06450 03cb9b0c58ab382f20aeb9f032942f80 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 1.6E-50 T 09-03-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 RG43_RS06450 03cb9b0c58ab382f20aeb9f032942f80 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 1.6E-50 T 09-03-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 RG43_RS06450 03cb9b0c58ab382f20aeb9f032942f80 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 1.6E-50 T 09-03-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 RG43_RS06450 03cb9b0c58ab382f20aeb9f032942f80 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 1.6E-50 T 09-03-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 RG43_RS13200 8101cafda242989f4221b62e43e9f610 462 TIGRFAM TIGR00886 2A0108: nitrite transporter 34 415 2.8E-102 T 09-03-2017 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 RG43_RS13200 8101cafda242989f4221b62e43e9f610 462 Pfam PF07690 Major Facilitator Superfamily 43 419 6.9E-9 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS13200 8101cafda242989f4221b62e43e9f610 462 Gene3D G3DSA:1.20.1250.20 29 229 9.4E-16 T 09-03-2017 RG43_RS13200 8101cafda242989f4221b62e43e9f610 462 Gene3D G3DSA:1.20.1250.20 254 455 1.9E-10 T 09-03-2017 RG43_RS13200 8101cafda242989f4221b62e43e9f610 462 SUPERFAMILY SSF103473 17 457 6.28E-37 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS05570 9e23702219d06826b81dbc87632ba4fd 291 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 280 5.9E-77 T 09-03-2017 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 RG43_RS05570 9e23702219d06826b81dbc87632ba4fd 291 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 1 287 1.4E-113 T 09-03-2017 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 RG43_RS05570 9e23702219d06826b81dbc87632ba4fd 291 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 09-03-2017 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 RG43_RS05570 9e23702219d06826b81dbc87632ba4fd 291 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 285 20.632 T 09-03-2017 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 RG43_RS08845 36e730ae4c428e9a0ba546ba875139de 75 SUPERFAMILY SSF158651 1 75 9.29E-33 T 09-03-2017 RG43_RS08845 36e730ae4c428e9a0ba546ba875139de 75 Gene3D G3DSA:1.10.3390.10 1 75 2.0E-39 T 09-03-2017 IPR023202 YejL-like domain RG43_RS08845 36e730ae4c428e9a0ba546ba875139de 75 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 2.0E-33 T 09-03-2017 IPR009857 Uncharacterised protein family UPF0352 RG43_RS08845 36e730ae4c428e9a0ba546ba875139de 75 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 25.006 T 09-03-2017 IPR009857 Uncharacterised protein family UPF0352 RG43_RS08845 36e730ae4c428e9a0ba546ba875139de 75 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 5.8E-25 T 09-03-2017 IPR009857 Uncharacterised protein family UPF0352 RG43_RS08845 36e730ae4c428e9a0ba546ba875139de 75 PIRSF PIRSF006188 1 72 5.0E-39 T 09-03-2017 IPR009857 Uncharacterised protein family UPF0352 RG43_RS20565 a3120a6aa5e4b528e4f2e1ca513e549c 129 Gene3D G3DSA:3.10.180.10 3 128 3.4E-36 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RG43_RS20565 a3120a6aa5e4b528e4f2e1ca513e549c 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 126 4.5E-23 T 09-03-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RG43_RS20565 a3120a6aa5e4b528e4f2e1ca513e549c 129 SUPERFAMILY SSF54593 3 128 4.83E-32 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RG43_RS21490 f8cecc10df7ed11bb9a851ffecbbd625 188 Pfam PF01184 GPR1/FUN34/yaaH family 4 177 3.7E-41 T 09-03-2017 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 RG43_RS21490 f8cecc10df7ed11bb9a851ffecbbd625 188 ProSitePatterns PS01114 GPR1/FUN34/yaaH family signature. 8 17 - T 09-03-2017 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 RG43_RS08470 a89f1cd669b476f07bf9ab2fd6e9a53a 88 ProDom PD028730 PMRD RESISTANCE POLYMYXIN B ANTIBIOTIC 1 82 9.0E-42 T 09-03-2017 IPR020146 Signal transduction protein PmrD RG43_RS08470 a89f1cd669b476f07bf9ab2fd6e9a53a 88 Pfam PF11183 Polymyxin resistance protein PmrD 1 82 5.5E-41 T 09-03-2017 RG43_RS21060 bf027aecde1ae723b927b94a26fa4936 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 301 2.6E-164 T 09-03-2017 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 RG43_RS21060 bf027aecde1ae723b927b94a26fa4936 305 SUPERFAMILY SSF54211 134 278 3.34E-54 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold RG43_RS21060 bf027aecde1ae723b927b94a26fa4936 305 SUPERFAMILY SSF54211 3 124 1.29E-41 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold RG43_RS21060 bf027aecde1ae723b927b94a26fa4936 305 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 46.002 T 09-03-2017 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 RG43_RS21060 bf027aecde1ae723b927b94a26fa4936 305 Gene3D G3DSA:3.30.1700.10 129 283 3.0E-63 T 09-03-2017 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 RG43_RS21060 bf027aecde1ae723b927b94a26fa4936 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 8.1E-109 T 09-03-2017 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 RG43_RS21060 bf027aecde1ae723b927b94a26fa4936 305 Gene3D G3DSA:3.30.230.20 3 124 1.7E-45 T 09-03-2017 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 RG43_RS14200 e95dcf69c366ac7c00165adc12060f86 132 SUPERFAMILY SSF54637 7 130 2.9E-36 T 09-03-2017 IPR029069 HotDog domain RG43_RS14200 e95dcf69c366ac7c00165adc12060f86 132 Gene3D G3DSA:3.10.129.10 5 130 3.3E-41 T 09-03-2017 IPR029069 HotDog domain RG43_RS14200 e95dcf69c366ac7c00165adc12060f86 132 Pfam PF03061 Thioesterase superfamily 26 97 6.9E-18 T 09-03-2017 IPR006683 Thioesterase domain Reactome: R-HSA-75105 RG43_RS19710 ef0b08475548e0efa19da7706997bd9f 164 SMART SM00347 45 147 1.4E-20 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RG43_RS19710 ef0b08475548e0efa19da7706997bd9f 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 87 2.5E-18 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RG43_RS19710 ef0b08475548e0efa19da7706997bd9f 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 107 123 2.5E-18 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RG43_RS19710 ef0b08475548e0efa19da7706997bd9f 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 137 157 2.5E-18 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RG43_RS19710 ef0b08475548e0efa19da7706997bd9f 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 103 2.5E-18 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RG43_RS19710 ef0b08475548e0efa19da7706997bd9f 164 Pfam PF01047 MarR family 53 111 3.7E-9 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RG43_RS19710 ef0b08475548e0efa19da7706997bd9f 164 Gene3D G3DSA:1.10.10.10 18 162 1.6E-31 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS19710 ef0b08475548e0efa19da7706997bd9f 164 SUPERFAMILY SSF46785 11 161 5.71E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS16275 45b8f4239660337dc4a0050045f942ba 276 SUPERFAMILY SSF55846 24 194 3.4E-52 T 09-03-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 RG43_RS16275 45b8f4239660337dc4a0050045f942ba 276 SUPERFAMILY SSF47090 198 273 2.35E-21 T 09-03-2017 IPR002477 Peptidoglycan binding-like RG43_RS16275 45b8f4239660337dc4a0050045f942ba 276 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 43 179 5.8E-20 T 09-03-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 RG43_RS16275 45b8f4239660337dc4a0050045f942ba 276 Gene3D G3DSA:3.40.80.10 40 197 9.3E-57 T 09-03-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 RG43_RS16275 45b8f4239660337dc4a0050045f942ba 276 SMART SM00644 32 178 1.2E-42 T 09-03-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 RG43_RS22980 428d77a812b0fa90008d58cb25c5609c 451 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 198 421 7.3E-63 T 09-03-2017 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 RG43_RS22980 428d77a812b0fa90008d58cb25c5609c 451 SUPERFAMILY SSF56327 172 449 7.2E-75 T 09-03-2017 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 RG43_RS22980 428d77a812b0fa90008d58cb25c5609c 451 SUPERFAMILY SSF51735 5 171 2.63E-53 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS22980 428d77a812b0fa90008d58cb25c5609c 451 Gene3D G3DSA:3.40.50.720 3 168 1.7E-63 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS22980 428d77a812b0fa90008d58cb25c5609c 451 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 142 173 - T 09-03-2017 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 RG43_RS22980 428d77a812b0fa90008d58cb25c5609c 451 Pfam PF02056 Family 4 glycosyl hydrolase 6 188 2.0E-81 T 09-03-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 RG43_RS22980 428d77a812b0fa90008d58cb25c5609c 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 194 206 6.4E-42 T 09-03-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 RG43_RS22980 428d77a812b0fa90008d58cb25c5609c 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 113 133 6.4E-42 T 09-03-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 RG43_RS22980 428d77a812b0fa90008d58cb25c5609c 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 142 159 6.4E-42 T 09-03-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 RG43_RS22980 428d77a812b0fa90008d58cb25c5609c 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 97 110 6.4E-42 T 09-03-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 RG43_RS22980 428d77a812b0fa90008d58cb25c5609c 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 168 179 6.4E-42 T 09-03-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 RG43_RS22980 428d77a812b0fa90008d58cb25c5609c 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 6 21 6.4E-42 T 09-03-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 RG43_RS22980 428d77a812b0fa90008d58cb25c5609c 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 75 91 6.4E-42 T 09-03-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 RG43_RS22980 428d77a812b0fa90008d58cb25c5609c 451 Gene3D G3DSA:3.90.110.10 171 449 1.6E-84 T 09-03-2017 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 RG43_RS17815 1bc1abec4cdd9bfda2cc56666581251f 292 SUPERFAMILY SSF56176 204 289 2.73E-24 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RG43_RS17815 1bc1abec4cdd9bfda2cc56666581251f 292 Gene3D G3DSA:3.10.580.10 55 196 1.1E-22 T 09-03-2017 RG43_RS17815 1bc1abec4cdd9bfda2cc56666581251f 292 Pfam PF00571 CBS domain 69 124 6.1E-8 T 09-03-2017 IPR000644 CBS domain RG43_RS17815 1bc1abec4cdd9bfda2cc56666581251f 292 Pfam PF00571 CBS domain 141 189 5.8E-5 T 09-03-2017 IPR000644 CBS domain RG43_RS17815 1bc1abec4cdd9bfda2cc56666581251f 292 Pfam PF03471 Transporter associated domain 206 281 2.1E-23 T 09-03-2017 IPR005170 Transporter-associated domain RG43_RS17815 1bc1abec4cdd9bfda2cc56666581251f 292 SMART SM00116 78 127 4.2 T 09-03-2017 IPR000644 CBS domain RG43_RS17815 1bc1abec4cdd9bfda2cc56666581251f 292 SMART SM00116 141 189 1.6 T 09-03-2017 IPR000644 CBS domain RG43_RS17815 1bc1abec4cdd9bfda2cc56666581251f 292 Gene3D G3DSA:3.30.465.10 197 283 4.7E-31 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RG43_RS17815 1bc1abec4cdd9bfda2cc56666581251f 292 SUPERFAMILY SSF54631 66 202 4.67E-32 T 09-03-2017 RG43_RS17815 1bc1abec4cdd9bfda2cc56666581251f 292 SMART SM01091 205 283 1.1E-31 T 09-03-2017 IPR005170 Transporter-associated domain RG43_RS15825 cae96e5f2f56e1e2e9cbe7903978b42c 586 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 435 538 9.9E-10 T 09-03-2017 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 RG43_RS15825 cae96e5f2f56e1e2e9cbe7903978b42c 586 Pfam PF13654 AAA domain 140 295 8.9E-20 T 09-03-2017 RG43_RS15825 cae96e5f2f56e1e2e9cbe7903978b42c 586 Gene3D G3DSA:3.30.230.10 340 541 1.0E-30 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RG43_RS15825 cae96e5f2f56e1e2e9cbe7903978b42c 586 SUPERFAMILY SSF54211 349 540 3.68E-33 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold RG43_RS15825 cae96e5f2f56e1e2e9cbe7903978b42c 586 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 462 481 1.9E-9 T 09-03-2017 RG43_RS15825 cae96e5f2f56e1e2e9cbe7903978b42c 586 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 492 510 1.9E-9 T 09-03-2017 RG43_RS15825 cae96e5f2f56e1e2e9cbe7903978b42c 586 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 432 451 1.9E-9 T 09-03-2017 RG43_RS04270 0f9258ff60cd3d6ce4623c7d398503a4 162 ProDom PD008308 HUPJ HYDROGENASE EXPRESSION/FORMATION HYDROGENASE-2 HYBE COMPONENT OPERON ELECTRON METAL-BINDING IRON 16 157 2.0E-67 T 09-03-2017 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE RG43_RS04270 0f9258ff60cd3d6ce4623c7d398503a4 162 TIGRFAM TIGR03993 hydrog_HybE: [NiFe] hydrogenase assembly chaperone, HybE family 16 153 4.9E-48 T 09-03-2017 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE RG43_RS04270 0f9258ff60cd3d6ce4623c7d398503a4 162 Pfam PF11939 Protein of unknown function (DUF3457) 12 155 5.7E-43 T 09-03-2017 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE RG43_RS26645 0f9258ff60cd3d6ce4623c7d398503a4 162 ProDom PD008308 HUPJ HYDROGENASE EXPRESSION/FORMATION HYDROGENASE-2 HYBE COMPONENT OPERON ELECTRON METAL-BINDING IRON 16 157 2.0E-67 T 09-03-2017 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE RG43_RS26645 0f9258ff60cd3d6ce4623c7d398503a4 162 TIGRFAM TIGR03993 hydrog_HybE: [NiFe] hydrogenase assembly chaperone, HybE family 16 153 4.9E-48 T 09-03-2017 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE RG43_RS26645 0f9258ff60cd3d6ce4623c7d398503a4 162 Pfam PF11939 Protein of unknown function (DUF3457) 12 155 5.7E-43 T 09-03-2017 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE RG43_RS23850 9672bb3573965f2fc0eae8261eaffbd5 342 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 5 330 9.9E-133 T 09-03-2017 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RG43_RS23850 9672bb3573965f2fc0eae8261eaffbd5 342 SUPERFAMILY SSF56194 202 339 5.1E-52 T 09-03-2017 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RG43_RS23850 9672bb3573965f2fc0eae8261eaffbd5 342 SUPERFAMILY SSF56176 3 197 1.14E-50 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RG43_RS23850 9672bb3573965f2fc0eae8261eaffbd5 342 Gene3D G3DSA:3.30.465.10 73 229 7.0E-53 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RG43_RS23850 9672bb3573965f2fc0eae8261eaffbd5 342 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 342 92.091 T 09-03-2017 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RG43_RS23850 9672bb3573965f2fc0eae8261eaffbd5 342 Gene3D G3DSA:3.30.43.10 3 68 7.1E-28 T 09-03-2017 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RG43_RS23850 9672bb3573965f2fc0eae8261eaffbd5 342 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 205 329 5.4E-35 T 09-03-2017 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RG43_RS23850 9672bb3573965f2fc0eae8261eaffbd5 342 Pfam PF01565 FAD binding domain 18 149 3.1E-27 T 09-03-2017 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RG43_RS23850 9672bb3573965f2fc0eae8261eaffbd5 342 Gene3D G3DSA:3.90.78.10 230 341 9.1E-48 T 09-03-2017 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RG43_RS19195 42aa88b8937af3dbc7154b9a93528a6f 91 Pfam PF02583 Metal-sensitive transcriptional repressor 7 87 4.5E-22 T 09-03-2017 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 RG43_RS11240 6dea786b6f8d6b227aab6944d807fc31 203 SMART SM00278 73 92 1.3 T 09-03-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RG43_RS11240 6dea786b6f8d6b227aab6944d807fc31 203 SMART SM00278 108 127 0.05 T 09-03-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RG43_RS11240 6dea786b6f8d6b227aab6944d807fc31 203 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 203 5.0E-74 T 09-03-2017 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 RG43_RS11240 6dea786b6f8d6b227aab6944d807fc31 203 SUPERFAMILY SSF50249 2 63 7.42E-19 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS11240 6dea786b6f8d6b227aab6944d807fc31 203 SUPERFAMILY SSF46929 157 201 7.59E-11 T 09-03-2017 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 RG43_RS11240 6dea786b6f8d6b227aab6944d807fc31 203 Gene3D G3DSA:2.40.50.140 2 64 1.5E-27 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS11240 6dea786b6f8d6b227aab6944d807fc31 203 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 203 32.86 T 09-03-2017 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 RG43_RS11240 6dea786b6f8d6b227aab6944d807fc31 203 SUPERFAMILY SSF47781 66 137 9.18E-22 T 09-03-2017 IPR010994 RuvA domain 2-like RG43_RS11240 6dea786b6f8d6b227aab6944d807fc31 203 Pfam PF01330 RuvA N terminal domain 2 62 4.3E-20 T 09-03-2017 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 RG43_RS11240 6dea786b6f8d6b227aab6944d807fc31 203 Gene3D G3DSA:1.10.150.20 67 138 3.2E-31 T 09-03-2017 RG43_RS11240 6dea786b6f8d6b227aab6944d807fc31 203 Gene3D G3DSA:1.10.8.10 157 200 2.4E-23 T 09-03-2017 RG43_RS11240 6dea786b6f8d6b227aab6944d807fc31 203 Pfam PF14520 Helix-hairpin-helix domain 72 130 3.4E-16 T 09-03-2017 RG43_RS11240 6dea786b6f8d6b227aab6944d807fc31 203 Pfam PF07499 RuvA, C-terminal domain 159 201 2.3E-15 T 09-03-2017 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 RG43_RS23360 62380669769c4e6c31a7044d018e1087 237 PIRSF PIRSF017818 1 237 2.6E-123 T 09-03-2017 IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 RG43_RS23360 62380669769c4e6c31a7044d018e1087 237 TIGRFAM TIGR01672 AphA: HAD phosphatase, family IIIB 1 237 2.0E-127 T 09-03-2017 IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 RG43_RS23360 62380669769c4e6c31a7044d018e1087 237 Gene3D G3DSA:3.40.50.1000 31 236 6.0E-82 T 09-03-2017 IPR023214 HAD-like domain RG43_RS23360 62380669769c4e6c31a7044d018e1087 237 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 11 220 5.8E-50 T 09-03-2017 IPR005519 Acid phosphatase, class B-like RG43_RS23360 62380669769c4e6c31a7044d018e1087 237 SUPERFAMILY SSF56784 31 237 3.6E-76 T 09-03-2017 IPR023214 HAD-like domain RG43_RS25740 17a7eb03d32997b9467690cc65ef38f8 553 Gene3D G3DSA:3.30.70.1450 213 278 1.0E-4 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RG43_RS25740 17a7eb03d32997b9467690cc65ef38f8 553 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 379 533 4.5E-52 T 09-03-2017 IPR006512 YidE/YbjL duplication RG43_RS25740 17a7eb03d32997b9467690cc65ef38f8 553 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 16 166 5.5E-38 T 09-03-2017 IPR006512 YidE/YbjL duplication RG43_RS25740 17a7eb03d32997b9467690cc65ef38f8 553 Hamap MF_01016 Putative transport protein YidE [yidE]. 1 553 58.486 T 09-03-2017 IPR023018 Transport protein YidE, putative RG43_RS25740 17a7eb03d32997b9467690cc65ef38f8 553 Pfam PF02080 TrkA-C domain 291 360 2.9E-10 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RG43_RS25740 17a7eb03d32997b9467690cc65ef38f8 553 Pfam PF02080 TrkA-C domain 212 270 5.3E-7 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RG43_RS25740 17a7eb03d32997b9467690cc65ef38f8 553 SUPERFAMILY SSF116726 286 360 2.09E-13 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RG43_RS25740 17a7eb03d32997b9467690cc65ef38f8 553 Gene3D G3DSA:3.30.70.1450 288 360 5.5E-11 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RG43_RS25740 17a7eb03d32997b9467690cc65ef38f8 553 Pfam PF06826 Predicted Permease Membrane Region 374 546 4.3E-47 T 09-03-2017 IPR006512 YidE/YbjL duplication RG43_RS25740 17a7eb03d32997b9467690cc65ef38f8 553 Pfam PF06826 Predicted Permease Membrane Region 11 179 4.5E-41 T 09-03-2017 IPR006512 YidE/YbjL duplication RG43_RS25740 17a7eb03d32997b9467690cc65ef38f8 553 SUPERFAMILY SSF116726 206 271 2.09E-8 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RG43_RS19560 fcf91c70968ec3cd7f4d493befd66c7a 285 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 1.1E-5 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RG43_RS19560 fcf91c70968ec3cd7f4d493befd66c7a 285 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 1.1E-5 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RG43_RS19560 fcf91c70968ec3cd7f4d493befd66c7a 285 SUPERFAMILY SSF55136 127 283 3.31E-35 T 09-03-2017 IPR011256 Regulatory factor, effector binding domain RG43_RS19560 fcf91c70968ec3cd7f4d493befd66c7a 285 SUPERFAMILY SSF46689 57 110 4.03E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS19560 fcf91c70968ec3cd7f4d493befd66c7a 285 Pfam PF12833 Helix-turn-helix domain 27 106 1.8E-20 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS19560 fcf91c70968ec3cd7f4d493befd66c7a 285 Pfam PF06445 GyrI-like small molecule binding domain 127 283 4.4E-11 T 09-03-2017 IPR029442 GyrI-like small molecule binding domain RG43_RS19560 fcf91c70968ec3cd7f4d493befd66c7a 285 Gene3D G3DSA:1.10.10.60 58 119 2.0E-21 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS19560 fcf91c70968ec3cd7f4d493befd66c7a 285 Gene3D G3DSA:1.10.10.60 3 57 9.1E-18 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS19560 fcf91c70968ec3cd7f4d493befd66c7a 285 SUPERFAMILY SSF46689 5 55 5.27E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS19560 fcf91c70968ec3cd7f4d493befd66c7a 285 SMART SM00342 21 104 4.3E-31 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS19560 fcf91c70968ec3cd7f4d493befd66c7a 285 SMART SM00871 126 283 9.4E-10 T 09-03-2017 IPR010499 Bacterial transcription activator, effector binding RG43_RS19560 fcf91c70968ec3cd7f4d493befd66c7a 285 Gene3D G3DSA:3.20.80.10 127 284 4.9E-43 T 09-03-2017 IPR011256 Regulatory factor, effector binding domain RG43_RS01565 6b217f4d5af8d85ecdd645e88f396cda 198 SUPERFAMILY SSF53335 11 189 4.43E-53 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS01565 6b217f4d5af8d85ecdd645e88f396cda 198 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 124 130 - T 09-03-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RG43_RS01565 6b217f4d5af8d85ecdd645e88f396cda 198 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 1 190 1.4E-79 T 09-03-2017 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RG43_RS01565 6b217f4d5af8d85ecdd645e88f396cda 198 PIRSF PIRSF004553 11 191 4.1E-62 T 09-03-2017 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RG43_RS01565 6b217f4d5af8d85ecdd645e88f396cda 198 Pfam PF03602 Conserved hypothetical protein 95 12 188 8.0E-63 T 09-03-2017 RG43_RS01565 6b217f4d5af8d85ecdd645e88f396cda 198 Gene3D G3DSA:3.40.50.150 5 194 5.7E-70 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS19335 0633e610b50472fcefb0cbe36053cb53 389 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 21 388 1.5E-168 T 09-03-2017 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 RG43_RS19335 0633e610b50472fcefb0cbe36053cb53 389 Pfam PF00285 Citrate synthase, C-terminal domain 22 370 5.6E-116 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 RG43_RS19335 0633e610b50472fcefb0cbe36053cb53 389 Gene3D G3DSA:1.10.230.10 251 335 5.6E-28 T 09-03-2017 IPR016143 Citrate synthase-like, small alpha subdomain Reactome: R-HSA-163765|Reactome: R-HSA-75105 RG43_RS19335 0633e610b50472fcefb0cbe36053cb53 389 ProSitePatterns PS00480 Citrate synthase signature. 271 283 - T 09-03-2017 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 RG43_RS19335 0633e610b50472fcefb0cbe36053cb53 389 PRINTS PR00143 Citrate synthase signature 139 152 1.8E-37 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 RG43_RS19335 0633e610b50472fcefb0cbe36053cb53 389 PRINTS PR00143 Citrate synthase signature 211 239 1.8E-37 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 RG43_RS19335 0633e610b50472fcefb0cbe36053cb53 389 PRINTS PR00143 Citrate synthase signature 341 355 1.8E-37 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 RG43_RS19335 0633e610b50472fcefb0cbe36053cb53 389 PRINTS PR00143 Citrate synthase signature 264 284 1.8E-37 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 RG43_RS19335 0633e610b50472fcefb0cbe36053cb53 389 PRINTS PR00143 Citrate synthase signature 321 337 1.8E-37 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 RG43_RS19335 0633e610b50472fcefb0cbe36053cb53 389 PRINTS PR00143 Citrate synthase signature 189 204 1.8E-37 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 RG43_RS19335 0633e610b50472fcefb0cbe36053cb53 389 Gene3D G3DSA:1.10.580.10 26 250 6.2E-79 T 09-03-2017 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 RG43_RS19335 0633e610b50472fcefb0cbe36053cb53 389 SUPERFAMILY SSF48256 22 382 1.7E-124 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 RG43_RS19335 0633e610b50472fcefb0cbe36053cb53 389 PIRSF PIRSF001369 15 389 1.5E-111 T 09-03-2017 IPR024176 Citrate synthase, bacterial-type RG43_RS12910 c5bb5ff20ad716f4e0d80c4e2adada28 472 Pfam PF00990 Diguanylate cyclase, GGDEF domain 303 461 1.4E-42 T 09-03-2017 IPR000160 GGDEF domain RG43_RS12910 c5bb5ff20ad716f4e0d80c4e2adada28 472 SUPERFAMILY SSF55073 308 463 8.16E-38 T 09-03-2017 IPR029787 Nucleotide cyclase RG43_RS12910 c5bb5ff20ad716f4e0d80c4e2adada28 472 Gene3D G3DSA:3.30.70.270 305 464 3.4E-41 T 09-03-2017 RG43_RS12910 c5bb5ff20ad716f4e0d80c4e2adada28 472 SMART SM00267 292 465 7.3E-58 T 09-03-2017 IPR000160 GGDEF domain RG43_RS12910 c5bb5ff20ad716f4e0d80c4e2adada28 472 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 303 463 1.6E-38 T 09-03-2017 IPR000160 GGDEF domain RG43_RS12760 075b81bc1672c3be76a4e8836e5d429c 236 Hamap MF_01065 UPF0257 lipoprotein YnfC [ynfC]. 1 236 68.798 T 09-03-2017 IPR010646 Uncharacterised protein family UPF0257 GO:0005886 RG43_RS12760 075b81bc1672c3be76a4e8836e5d429c 236 ProDom PD120112 LIPOPROTEIN YNFC MEMBRANE UPF0257 PRECURSOR PALMITATE SIGNAL INNER 1 236 7.0E-137 T 09-03-2017 IPR010646 Uncharacterised protein family UPF0257 GO:0005886 RG43_RS12760 075b81bc1672c3be76a4e8836e5d429c 236 Pfam PF06788 Uncharacterised protein family (UPF0257) 1 236 1.0E-127 T 09-03-2017 IPR010646 Uncharacterised protein family UPF0257 GO:0005886 RG43_RS01045 f97d47cebb76536fd88808c84d9d6e6d 535 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 73 453 3.7E-108 T 09-03-2017 IPR000914 Solute-binding protein family 5 domain RG43_RS01045 f97d47cebb76536fd88808c84d9d6e6d 535 PIRSF PIRSF002741 21 535 1.2E-121 T 09-03-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RG43_RS01045 f97d47cebb76536fd88808c84d9d6e6d 535 SUPERFAMILY SSF53850 29 534 5.07E-163 T 09-03-2017 RG43_RS01045 f97d47cebb76536fd88808c84d9d6e6d 535 Gene3D G3DSA:3.10.105.10 288 505 6.0E-69 T 09-03-2017 RG43_RS01045 f97d47cebb76536fd88808c84d9d6e6d 535 Gene3D G3DSA:3.90.76.10 39 219 4.1E-50 T 09-03-2017 RG43_RS01045 f97d47cebb76536fd88808c84d9d6e6d 535 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 79 101 - T 09-03-2017 IPR023765 Solute-binding protein family 5, conserved site RG43_RS18415 1789572b041dafe54ac987870d68db11 292 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 160 2.8E-47 T 09-03-2017 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 RG43_RS18415 1789572b041dafe54ac987870d68db11 292 PIRSF PIRSF000103 1 291 1.9E-71 T 09-03-2017 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 RG43_RS18415 1789572b041dafe54ac987870d68db11 292 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 2 291 5.5E-156 T 09-03-2017 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 RG43_RS18415 1789572b041dafe54ac987870d68db11 292 Gene3D G3DSA:3.40.50.720 1 161 1.0E-55 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS18415 1789572b041dafe54ac987870d68db11 292 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 09-03-2017 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 RG43_RS18415 1789572b041dafe54ac987870d68db11 292 SUPERFAMILY SSF51735 1 160 3.29E-46 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS18415 1789572b041dafe54ac987870d68db11 292 Gene3D G3DSA:1.10.1040.10 163 290 4.8E-39 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RG43_RS18415 1789572b041dafe54ac987870d68db11 292 SUPERFAMILY SSF48179 162 289 3.51E-34 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RG43_RS18415 1789572b041dafe54ac987870d68db11 292 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 163 283 1.5E-36 T 09-03-2017 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 RG43_RS14545 03ef5594c7ddc01ba92d42d4ff09b151 639 SUPERFAMILY SSF46689 536 631 8.96E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS14545 03ef5594c7ddc01ba92d42d4ff09b151 639 Gene3D G3DSA:1.10.10.60 580 631 6.5E-14 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS14545 03ef5594c7ddc01ba92d42d4ff09b151 639 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 410 425 - T 09-03-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RG43_RS14545 03ef5594c7ddc01ba92d42d4ff09b151 639 Gene3D G3DSA:1.10.8.60 498 569 8.3E-13 T 09-03-2017 RG43_RS14545 03ef5594c7ddc01ba92d42d4ff09b151 639 SMART SM00382 347 488 0.0016 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS14545 03ef5594c7ddc01ba92d42d4ff09b151 639 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 351 364 - T 09-03-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RG43_RS14545 03ef5594c7ddc01ba92d42d4ff09b151 639 SMART SM00091 203 267 1.0E-5 T 09-03-2017 IPR000014 PAS domain RG43_RS14545 03ef5594c7ddc01ba92d42d4ff09b151 639 Pfam PF00989 PAS fold 204 306 1.9E-13 T 09-03-2017 IPR013767 PAS fold GO:0006355 RG43_RS14545 03ef5594c7ddc01ba92d42d4ff09b151 639 SUPERFAMILY SSF52540 331 567 2.35E-42 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS14545 03ef5594c7ddc01ba92d42d4ff09b151 639 Pfam PF00158 Sigma-54 interaction domain 331 490 2.7E-35 T 09-03-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RG43_RS14545 03ef5594c7ddc01ba92d42d4ff09b151 639 Pfam PF02954 Bacterial regulatory protein, Fis family 589 628 3.4E-14 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RG43_RS14545 03ef5594c7ddc01ba92d42d4ff09b151 639 Gene3D G3DSA:3.30.450.20 203 304 2.7E-11 T 09-03-2017 RG43_RS14545 03ef5594c7ddc01ba92d42d4ff09b151 639 SUPERFAMILY SSF55785 198 297 7.85E-8 T 09-03-2017 IPR000014 PAS domain RG43_RS14545 03ef5594c7ddc01ba92d42d4ff09b151 639 Gene3D G3DSA:3.40.50.300 324 496 1.0E-37 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS06280 860858327148ec93a2d3de1c8c06c054 180 SUPERFAMILY SSF54862 18 116 6.7E-23 T 09-03-2017 RG43_RS06280 860858327148ec93a2d3de1c8c06c054 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS06280 860858327148ec93a2d3de1c8c06c054 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS06280 860858327148ec93a2d3de1c8c06c054 180 Pfam PF12838 4Fe-4S dicluster domain 39 89 5.7E-13 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS06280 860858327148ec93a2d3de1c8c06c054 180 Gene3D G3DSA:3.30.70.20 3 93 7.6E-21 T 09-03-2017 RG43_RS16445 d62cf3daab5be2ea575c757ea9238087 128 PIRSF PIRSF018634 1 128 4.9E-49 T 09-03-2017 IPR009387 Toxin HigB-2 RG43_RS16445 d62cf3daab5be2ea575c757ea9238087 128 Pfam PF06296 RelE toxin of RelE / RelB toxin-antitoxin system 1 124 3.1E-34 T 09-03-2017 IPR009387 Toxin HigB-2 RG43_RS23160 27a7c854415008b9094dd665d75abc41 510 SMART SM00382 288 491 0.01 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS23160 27a7c854415008b9094dd665d75abc41 510 SMART SM00382 30 222 1.1E-5 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS23160 27a7c854415008b9094dd665d75abc41 510 ProSitePatterns PS00211 ABC transporters family signature. 410 424 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS23160 27a7c854415008b9094dd665d75abc41 510 Gene3D G3DSA:3.40.50.300 3 240 4.6E-63 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS23160 27a7c854415008b9094dd665d75abc41 510 Gene3D G3DSA:3.40.50.300 265 498 2.7E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS23160 27a7c854415008b9094dd665d75abc41 510 SUPERFAMILY SSF52540 257 503 1.36E-46 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS23160 27a7c854415008b9094dd665d75abc41 510 SUPERFAMILY SSF52540 4 235 1.03E-58 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS23160 27a7c854415008b9094dd665d75abc41 510 Pfam PF00005 ABC transporter 280 437 6.1E-21 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS23160 27a7c854415008b9094dd665d75abc41 510 Pfam PF00005 ABC transporter 21 174 1.5E-30 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS04740 165c0ccc428101deea85182207f0898b 228 SMART SM00418 17 96 9.1E-15 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RG43_RS04740 165c0ccc428101deea85182207f0898b 228 Pfam PF12840 Helix-turn-helix domain 18 75 3.6E-9 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS04740 165c0ccc428101deea85182207f0898b 228 SUPERFAMILY SSF46785 12 96 1.36E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS04740 165c0ccc428101deea85182207f0898b 228 Gene3D G3DSA:1.10.10.10 13 96 7.6E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS08040 3494f31de47f5362e8fac7399662292c 310 Gene3D G3DSA:1.20.1080.10 54 281 5.8E-47 T 09-03-2017 IPR023271 Aquaporin-like Reactome: R-HSA-432047 RG43_RS08040 3494f31de47f5362e8fac7399662292c 310 Pfam PF01226 Formate/nitrite transporter 40 276 2.4E-40 T 09-03-2017 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 RG43_RS24920 682abd675554dcf79ce6c0637b875cc2 474 Gene3D G3DSA:3.90.1710.10 153 300 4.2E-74 T 09-03-2017 RG43_RS24920 682abd675554dcf79ce6c0637b875cc2 474 Gene3D G3DSA:3.90.1700.10 302 467 4.5E-75 T 09-03-2017 RG43_RS24920 682abd675554dcf79ce6c0637b875cc2 474 Pfam PF06545 Protein of unknown function (DUF1116) 140 354 1.6E-99 T 09-03-2017 IPR009499 Protein of unknown function DUF1116 RG43_RS24920 682abd675554dcf79ce6c0637b875cc2 474 Gene3D G3DSA:1.10.10.660 91 152 4.7E-37 T 09-03-2017 IPR024033 Uncharacterised domain, YlbE RG43_RS10960 60dc0244e61b9d9d23b4a68998386248 167 Gene3D G3DSA:1.20.1260.10 3 162 6.4E-37 T 09-03-2017 IPR012347 Ferritin-related RG43_RS10960 60dc0244e61b9d9d23b4a68998386248 167 SUPERFAMILY SSF47240 9 158 3.95E-35 T 09-03-2017 IPR009078 Ferritin-like superfamily RG43_RS10960 60dc0244e61b9d9d23b4a68998386248 167 Pfam PF00210 Ferritin-like domain 9 142 1.6E-25 T 09-03-2017 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 RG43_RS24135 5209eac880717d0df7e3e72045ac99b9 502 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 253 4.1E-96 T 09-03-2017 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 RG43_RS24135 5209eac880717d0df7e3e72045ac99b9 502 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 5 497 3.7E-231 T 09-03-2017 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 RG43_RS24135 5209eac880717d0df7e3e72045ac99b9 502 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 363 383 - T 09-03-2017 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 RG43_RS24135 5209eac880717d0df7e3e72045ac99b9 502 Hamap MF_00186 Glycerol kinase [glpK]. 4 498 60.299 T 09-03-2017 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 RG43_RS24135 5209eac880717d0df7e3e72045ac99b9 502 PIRSF PIRSF000538 4 502 2.9E-178 T 09-03-2017 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 RG43_RS24135 5209eac880717d0df7e3e72045ac99b9 502 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 136 148 - T 09-03-2017 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 RG43_RS24135 5209eac880717d0df7e3e72045ac99b9 502 SUPERFAMILY SSF53067 256 498 1.73E-87 T 09-03-2017 RG43_RS24135 5209eac880717d0df7e3e72045ac99b9 502 SUPERFAMILY SSF53067 5 256 1.76E-96 T 09-03-2017 RG43_RS24135 5209eac880717d0df7e3e72045ac99b9 502 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 451 5.3E-62 T 09-03-2017 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 RG43_RS24135 5209eac880717d0df7e3e72045ac99b9 502 Gene3D G3DSA:3.30.420.40 2 254 1.1E-108 T 09-03-2017 RG43_RS24135 5209eac880717d0df7e3e72045ac99b9 502 Gene3D G3DSA:3.30.420.40 256 498 4.5E-105 T 09-03-2017 RG43_RS15690 ba88ee2c8ffa535d78ee61ad5a098427 30 Pfam PF08173 Membrane bound YbgT-like protein 1 25 2.7E-11 T 09-03-2017 IPR012994 Membrane bound YbgT-like RG43_RS16920 da058540adf0bbbafe010f4d58f4d7de 439 Gene3D G3DSA:3.90.226.10 258 300 1.2E-32 T 09-03-2017 IPR029045 ClpP/crotonase-like domain RG43_RS16920 da058540adf0bbbafe010f4d58f4d7de 439 Gene3D G3DSA:3.90.226.10 80 193 1.2E-32 T 09-03-2017 IPR029045 ClpP/crotonase-like domain RG43_RS16920 da058540adf0bbbafe010f4d58f4d7de 439 Pfam PF01343 Peptidase family S49 150 297 5.2E-44 T 09-03-2017 IPR002142 Peptidase S49 GO:0006508|GO:0008233 RG43_RS16920 da058540adf0bbbafe010f4d58f4d7de 439 SUPERFAMILY SSF52096 73 197 3.83E-32 T 09-03-2017 IPR029045 ClpP/crotonase-like domain RG43_RS16920 da058540adf0bbbafe010f4d58f4d7de 439 SUPERFAMILY SSF52096 228 287 3.83E-32 T 09-03-2017 IPR029045 ClpP/crotonase-like domain RG43_RS09365 a7650f1e759d17bba5660e1029994a22 420 Hamap MF_01296 D-tagatose-1,6-bisphosphate aldolase subunit GatZ [gatZ]. 1 420 91.214 T 09-03-2017 IPR023436 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit GatZ GO:0019402 RG43_RS09365 a7650f1e759d17bba5660e1029994a22 420 Gene3D G3DSA:3.20.20.70 1 289 4.5E-144 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS09365 a7650f1e759d17bba5660e1029994a22 420 Gene3D G3DSA:1.10.400.20 290 405 5.3E-52 T 09-03-2017 RG43_RS09365 a7650f1e759d17bba5660e1029994a22 420 SUPERFAMILY SSF51569 1 418 7.51E-167 T 09-03-2017 RG43_RS09365 a7650f1e759d17bba5660e1029994a22 420 PIRSF PIRSF009264 1 420 1.2E-199 T 09-03-2017 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 RG43_RS09365 a7650f1e759d17bba5660e1029994a22 420 Pfam PF08013 Tagatose 6 phosphate kinase 1 418 7.7E-190 T 09-03-2017 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 RG43_RS09365 a7650f1e759d17bba5660e1029994a22 420 TIGRFAM TIGR02810 agaZ_gatZ: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit 3 418 9.4E-211 T 09-03-2017 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 RG43_RS02065 8de9bdc6a8701f4dcf10f00f7b9c43dd 387 Gene3D G3DSA:3.20.20.10 117 265 1.9E-8 T 09-03-2017 IPR029066 PLP-binding barrel RG43_RS02065 8de9bdc6a8701f4dcf10f00f7b9c43dd 387 SUPERFAMILY SSF51419 34 268 3.05E-23 T 09-03-2017 IPR029066 PLP-binding barrel RG43_RS02065 8de9bdc6a8701f4dcf10f00f7b9c43dd 387 Pfam PF01168 Alanine racemase, N-terminal domain 33 264 1.9E-21 T 09-03-2017 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RG43_RS20225 84fdf25ea3e139433434fe0e444a38d3 352 SUPERFAMILY SSF81345 13 346 8.5E-79 T 09-03-2017 IPR029022 ABC transporter, BtuC-like RG43_RS20225 84fdf25ea3e139433434fe0e444a38d3 352 Gene3D G3DSA:1.10.3470.10 13 348 4.9E-97 T 09-03-2017 IPR029022 ABC transporter, BtuC-like RG43_RS20225 84fdf25ea3e139433434fe0e444a38d3 352 Pfam PF01032 FecCD transport family 32 346 1.9E-83 T 09-03-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 RG43_RS22265 e300e389c92535b2ab4d64bd780f0a09 315 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 5.3E-21 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS22265 e300e389c92535b2ab4d64bd780f0a09 315 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 6 16 6.2E-6 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS22265 e300e389c92535b2ab4d64bd780f0a09 315 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 16 26 6.2E-6 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS22265 e300e389c92535b2ab4d64bd780f0a09 315 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 09-03-2017 RG43_RS22265 e300e389c92535b2ab4d64bd780f0a09 315 SUPERFAMILY SSF47413 3 60 2.13E-16 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS22265 e300e389c92535b2ab4d64bd780f0a09 315 SUPERFAMILY SSF53822 63 314 2.72E-60 T 09-03-2017 IPR028082 Periplasmic binding protein-like I RG43_RS22265 e300e389c92535b2ab4d64bd780f0a09 315 Gene3D G3DSA:3.40.50.2300 54 174 2.8E-19 T 09-03-2017 RG43_RS22265 e300e389c92535b2ab4d64bd780f0a09 315 SMART SM00354 4 74 5.3E-33 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS22265 e300e389c92535b2ab4d64bd780f0a09 315 Pfam PF13377 Periplasmic binding protein-like domain 168 312 2.7E-19 T 09-03-2017 RG43_RS22265 e300e389c92535b2ab4d64bd780f0a09 315 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 314 1.8E-178 T 09-03-2017 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 RG43_RS22265 e300e389c92535b2ab4d64bd780f0a09 315 Gene3D G3DSA:3.40.50.2300 175 279 4.5E-42 T 09-03-2017 RG43_RS22265 e300e389c92535b2ab4d64bd780f0a09 315 Gene3D G3DSA:1.10.260.40 3 53 4.3E-23 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS05415 a854d8efa437749e691a43d2cdb0baf8 461 Hamap MF_01644 D-phenylhydantoinase [hyuA]. 1 461 100.032 T 09-03-2017 IPR023766 D-phenylhydantoinase GO:0005737|GO:0006208|GO:0016812 RG43_RS05415 a854d8efa437749e691a43d2cdb0baf8 461 Gene3D G3DSA:3.20.20.140 69 375 7.2E-103 T 09-03-2017 RG43_RS05415 a854d8efa437749e691a43d2cdb0baf8 461 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 3 453 1.5E-203 T 09-03-2017 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: R-HSA-399956 RG43_RS05415 a854d8efa437749e691a43d2cdb0baf8 461 SUPERFAMILY SSF51338 349 456 2.7E-36 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RG43_RS05415 a854d8efa437749e691a43d2cdb0baf8 461 Gene3D G3DSA:2.30.40.10 376 460 2.0E-14 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RG43_RS05415 a854d8efa437749e691a43d2cdb0baf8 461 SUPERFAMILY SSF51556 54 382 3.6E-95 T 09-03-2017 IPR032466 Metal-dependent hydrolase RG43_RS05415 a854d8efa437749e691a43d2cdb0baf8 461 SUPERFAMILY SSF51338 1 64 2.96E-14 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RG43_RS05415 a854d8efa437749e691a43d2cdb0baf8 461 Gene3D G3DSA:2.30.40.10 2 68 4.4E-27 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RG43_RS05415 a854d8efa437749e691a43d2cdb0baf8 461 Pfam PF01979 Amidohydrolase family 50 434 6.2E-21 T 09-03-2017 IPR006680 Amidohydrolase-related GO:0016787 RG43_RS05560 453121ae4e1098a84bfe62fd567d28b8 176 SUPERFAMILY SSF55811 5 159 6.77E-33 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 RG43_RS05560 453121ae4e1098a84bfe62fd567d28b8 176 Gene3D G3DSA:3.90.79.10 3 151 7.1E-33 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 RG43_RS05560 453121ae4e1098a84bfe62fd567d28b8 176 PRINTS PR00502 NUDIX hydrolase family signature 33 47 2.5E-7 T 09-03-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 RG43_RS05560 453121ae4e1098a84bfe62fd567d28b8 176 PRINTS PR00502 NUDIX hydrolase family signature 47 62 2.5E-7 T 09-03-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 RG43_RS05560 453121ae4e1098a84bfe62fd567d28b8 176 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.961 T 09-03-2017 IPR022927 RNA pyrophosphohydrolase RppH RG43_RS05560 453121ae4e1098a84bfe62fd567d28b8 176 Pfam PF00293 NUDIX domain 7 146 5.1E-27 T 09-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 RG43_RS05560 453121ae4e1098a84bfe62fd567d28b8 176 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 09-03-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RG43_RS15190 37f8f3a29064757046eb346eab37a8ed 401 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 323 400 2.5E-20 T 09-03-2017 IPR010930 Flagellar basal-body/hook protein, C-terminal domain RG43_RS15190 37f8f3a29064757046eb346eab37a8ed 401 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 383 4.8E-97 T 09-03-2017 IPR020013 Fagellar hook-basal body protein, FlgE/F/G RG43_RS15190 37f8f3a29064757046eb346eab37a8ed 401 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 09-03-2017 IPR019776 Flagellar basal body rod protein, conserved site RG43_RS15190 37f8f3a29064757046eb346eab37a8ed 401 Pfam PF00460 Flagella basal body rod protein 4 33 1.1E-11 T 09-03-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 RG43_RS15190 37f8f3a29064757046eb346eab37a8ed 401 Pfam PF07559 Flagellar basal body protein FlaE 173 282 1.2E-21 T 09-03-2017 IPR011491 Flagellar hook protein FlgE RG43_RS15190 37f8f3a29064757046eb346eab37a8ed 401 SUPERFAMILY SSF117143 73 362 6.28E-85 T 09-03-2017 RG43_RS16735 86f03c20a2b8c6f9b7b5b3148d07c278 81 SUPERFAMILY SSF54285 1 81 9.16E-24 T 09-03-2017 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RG43_RS16735 86f03c20a2b8c6f9b7b5b3148d07c278 81 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 81 4.1E-24 T 09-03-2017 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 Reactome: R-HSA-947581 RG43_RS16735 86f03c20a2b8c6f9b7b5b3148d07c278 81 Gene3D G3DSA:3.10.20.30 1 81 6.9E-26 T 09-03-2017 IPR012675 Beta-grasp domain RG43_RS16735 86f03c20a2b8c6f9b7b5b3148d07c278 81 Pfam PF02597 ThiS family 4 81 4.8E-22 T 09-03-2017 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 RG43_RS19345 d466f1c18a19a6a7c1bbbdd7e864463e 528 SMART SM00382 238 401 1.7E-10 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS19345 d466f1c18a19a6a7c1bbbdd7e864463e 528 Gene3D G3DSA:1.10.8.60 400 451 1.5E-15 T 09-03-2017 RG43_RS19345 d466f1c18a19a6a7c1bbbdd7e864463e 528 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 444 453 - T 09-03-2017 IPR025944 Sigma-54 interaction domain, conserved site RG43_RS19345 d466f1c18a19a6a7c1bbbdd7e864463e 528 Pfam PF06506 Propionate catabolism activator 36 196 5.5E-51 T 09-03-2017 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal GO:0000156|GO:0000160|GO:0003677|GO:0005524 RG43_RS19345 d466f1c18a19a6a7c1bbbdd7e864463e 528 SUPERFAMILY SSF52540 217 461 4.28E-61 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS19345 d466f1c18a19a6a7c1bbbdd7e864463e 528 Gene3D G3DSA:3.40.50.10660 100 176 5.8E-37 T 09-03-2017 RG43_RS19345 d466f1c18a19a6a7c1bbbdd7e864463e 528 SUPERFAMILY SSF159800 12 195 6.28E-54 T 09-03-2017 RG43_RS19345 d466f1c18a19a6a7c1bbbdd7e864463e 528 Gene3D G3DSA:3.40.50.2300 1 99 9.7E-47 T 09-03-2017 RG43_RS19345 d466f1c18a19a6a7c1bbbdd7e864463e 528 Pfam PF02954 Bacterial regulatory protein, Fis family 498 527 2.5E-10 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RG43_RS19345 d466f1c18a19a6a7c1bbbdd7e864463e 528 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 313 328 - T 09-03-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RG43_RS19345 d466f1c18a19a6a7c1bbbdd7e864463e 528 Pfam PF00158 Sigma-54 interaction domain 219 393 9.0E-65 T 09-03-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RG43_RS19345 d466f1c18a19a6a7c1bbbdd7e864463e 528 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 495 512 4.1E-5 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RG43_RS19345 d466f1c18a19a6a7c1bbbdd7e864463e 528 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 512 528 4.1E-5 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RG43_RS19345 d466f1c18a19a6a7c1bbbdd7e864463e 528 Gene3D G3DSA:3.40.50.300 221 399 2.0E-54 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS19345 d466f1c18a19a6a7c1bbbdd7e864463e 528 TIGRFAM TIGR02329 propionate_PrpR: propionate catabolism operon regulatory protein PrpR 8 528 1.4E-265 T 09-03-2017 IPR012704 Signal transduction response regulator, propionate catabolism, transcriptional regulator PrpR GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0005737|GO:0019629 RG43_RS19345 d466f1c18a19a6a7c1bbbdd7e864463e 528 SUPERFAMILY SSF46689 444 527 9.68E-7 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS19345 d466f1c18a19a6a7c1bbbdd7e864463e 528 Gene3D G3DSA:1.10.10.60 452 527 2.8E-14 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS19345 d466f1c18a19a6a7c1bbbdd7e864463e 528 Gene3D G3DSA:1.20.5.170 178 220 2.9E-28 T 09-03-2017 RG43_RS09820 98209c5c075015f3cf629be65c200818 157 SMART SM00871 1 153 2.9E-33 T 09-03-2017 IPR010499 Bacterial transcription activator, effector binding RG43_RS09820 98209c5c075015f3cf629be65c200818 157 Pfam PF06445 GyrI-like small molecule binding domain 1 152 1.7E-29 T 09-03-2017 IPR029442 GyrI-like small molecule binding domain RG43_RS09820 98209c5c075015f3cf629be65c200818 157 SUPERFAMILY SSF55136 1 155 1.57E-44 T 09-03-2017 IPR011256 Regulatory factor, effector binding domain RG43_RS09820 98209c5c075015f3cf629be65c200818 157 Gene3D G3DSA:3.20.80.10 1 155 7.0E-55 T 09-03-2017 IPR011256 Regulatory factor, effector binding domain RG43_RS09820 98209c5c075015f3cf629be65c200818 157 Hamap MF_01896 DNA gyrase inhibitor [sbmC]. 1 155 39.519 T 09-03-2017 IPR024911 DNA gyrase inhibitor GyrI GO:0008657 RG43_RS18075 36ce5b68420ae485f364f1c4cd23ec1b 209 SUPERFAMILY SSF110849 49 179 4.88E-26 T 09-03-2017 IPR003115 ParB/Sulfiredoxin RG43_RS18075 36ce5b68420ae485f364f1c4cd23ec1b 209 Gene3D G3DSA:3.90.1530.10 48 150 5.3E-12 T 09-03-2017 RG43_RS18075 36ce5b68420ae485f364f1c4cd23ec1b 209 SMART SM00470 51 146 1.1E-16 T 09-03-2017 IPR003115 ParB/Sulfiredoxin RG43_RS18075 36ce5b68420ae485f364f1c4cd23ec1b 209 Pfam PF02195 ParB-like nuclease domain 52 145 2.7E-17 T 09-03-2017 IPR003115 ParB/Sulfiredoxin RG43_RS19645 ad031c52c7783320de1af8dfd1aa1122 236 SUPERFAMILY SSF49354 26 127 9.42E-8 T 09-03-2017 IPR008962 PapD-like RG43_RS12510 a0e96084fa44c0a611d709c966c65d3f 676 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 139 283 2.3E-47 T 09-03-2017 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS12510 a0e96084fa44c0a611d709c966c65d3f 676 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 445 5.4E-180 T 09-03-2017 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 RG43_RS12510 a0e96084fa44c0a611d709c966c65d3f 676 SUPERFAMILY SSF46548 336 444 3.31E-20 T 09-03-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 RG43_RS12510 a0e96084fa44c0a611d709c966c65d3f 676 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 377 388 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS12510 a0e96084fa44c0a611d709c966c65d3f 676 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 416 427 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS12510 a0e96084fa44c0a611d709c966c65d3f 676 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 115 1.6E-33 T 09-03-2017 IPR026902 RnfC Barrel sandwich hybrid domain RG43_RS12510 a0e96084fa44c0a611d709c966c65d3f 676 Pfam PF12838 4Fe-4S dicluster domain 377 430 1.4E-8 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS12510 a0e96084fa44c0a611d709c966c65d3f 676 Gene3D G3DSA:1.10.1060.10 333 449 6.8E-18 T 09-03-2017 RG43_RS12510 a0e96084fa44c0a611d709c966c65d3f 676 SUPERFAMILY SSF142019 94 303 3.66E-61 T 09-03-2017 RG43_RS12510 a0e96084fa44c0a611d709c966c65d3f 676 Pfam PF10531 SLBB domain 296 344 3.1E-12 T 09-03-2017 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS12510 a0e96084fa44c0a611d709c966c65d3f 676 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 676 260.163 T 09-03-2017 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 RG43_RS15210 1ccf4b8bb0f2472bec86e9fa739b84f3 219 Pfam PF13144 Chaperone for flagella basal body P-ring formation 26 215 9.9E-37 T 09-03-2017 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal RG43_RS15210 1ccf4b8bb0f2472bec86e9fa739b84f3 219 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 84 217 2.1E-36 T 09-03-2017 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal RG43_RS15210 1ccf4b8bb0f2472bec86e9fa739b84f3 219 SMART SM00858 95 157 2.1E-8 T 09-03-2017 IPR013974 SAF domain Reactome: R-HSA-4085001 RG43_RS23575 a75e87dc5ef286eb60952a02543cf380 409 SUPERFAMILY SSF50129 3 189 2.44E-24 T 09-03-2017 IPR011032 GroES-like RG43_RS23575 a75e87dc5ef286eb60952a02543cf380 409 Gene3D G3DSA:3.90.180.10 1 184 1.6E-21 T 09-03-2017 IPR011032 GroES-like RG43_RS23575 a75e87dc5ef286eb60952a02543cf380 409 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 98 2.5E-5 T 09-03-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RG43_RS23575 a75e87dc5ef286eb60952a02543cf380 409 SUPERFAMILY SSF51735 169 330 7.0E-15 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS23575 a75e87dc5ef286eb60952a02543cf380 409 Pfam PF00107 Zinc-binding dehydrogenase 187 325 3.2E-10 T 09-03-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RG43_RS23575 a75e87dc5ef286eb60952a02543cf380 409 Gene3D G3DSA:3.40.50.720 185 301 4.7E-13 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS01145 a90843e50fad6f856802e45df98c071c 223 SUPERFAMILY SSF52540 2 208 1.9E-15 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS01145 a90843e50fad6f856802e45df98c071c 223 TIGRFAM TIGR03371 cellulose_yhjQ: cellulose synthase operon protein YhjQ 2 212 4.7E-73 T 09-03-2017 IPR017746 Cellulose synthase operon protein BcsQ RG43_RS01145 a90843e50fad6f856802e45df98c071c 223 Gene3D G3DSA:3.40.50.300 2 209 3.0E-16 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS01145 a90843e50fad6f856802e45df98c071c 223 Pfam PF06564 Cellulose biosynthesis protein BcsQ 2 209 2.6E-91 T 09-03-2017 IPR017746 Cellulose synthase operon protein BcsQ RG43_RS02905 533ca8a6480f4ec60cbed031254eb8d2 309 SMART SM00729 23 247 4.9E-43 T 09-03-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RG43_RS02905 533ca8a6480f4ec60cbed031254eb8d2 309 Pfam PF04055 Radical SAM superfamily 43 202 1.1E-15 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 RG43_RS02905 533ca8a6480f4ec60cbed031254eb8d2 309 Pfam PF16199 Radical_SAM C-terminal domain 208 283 2.9E-17 T 09-03-2017 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 RG43_RS02905 533ca8a6480f4ec60cbed031254eb8d2 309 Gene3D G3DSA:3.80.30.20 22 231 2.7E-34 T 09-03-2017 IPR023404 Radical SAM, alpha/beta horseshoe RG43_RS02905 533ca8a6480f4ec60cbed031254eb8d2 309 SUPERFAMILY SSF102114 13 254 1.31E-45 T 09-03-2017 RG43_RS02905 533ca8a6480f4ec60cbed031254eb8d2 309 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 301 1.9E-142 T 09-03-2017 IPR005911 Protein YhcC-like GO:0051536 RG43_RS09335 12e9d012b92b9dbf28364b7f638bf670 321 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 53 77 - T 09-03-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RG43_RS09335 12e9d012b92b9dbf28364b7f638bf670 321 Gene3D G3DSA:3.40.1190.20 18 314 1.3E-55 T 09-03-2017 IPR029056 Ribokinase-like RG43_RS09335 12e9d012b92b9dbf28364b7f638bf670 321 SUPERFAMILY SSF53613 18 312 1.37E-52 T 09-03-2017 IPR029056 Ribokinase-like RG43_RS09335 12e9d012b92b9dbf28364b7f638bf670 321 PRINTS PR00990 Ribokinase signature 21 42 2.4E-5 T 09-03-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 RG43_RS09335 12e9d012b92b9dbf28364b7f638bf670 321 PRINTS PR00990 Ribokinase signature 48 67 2.4E-5 T 09-03-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 RG43_RS09335 12e9d012b92b9dbf28364b7f638bf670 321 PRINTS PR00990 Ribokinase signature 234 245 2.4E-5 T 09-03-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 RG43_RS09335 12e9d012b92b9dbf28364b7f638bf670 321 PRINTS PR00990 Ribokinase signature 191 206 2.4E-5 T 09-03-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 RG43_RS09335 12e9d012b92b9dbf28364b7f638bf670 321 Pfam PF00294 pfkB family carbohydrate kinase 19 306 4.3E-53 T 09-03-2017 IPR011611 Carbohydrate kinase PfkB RG43_RS09335 12e9d012b92b9dbf28364b7f638bf670 321 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 263 276 - T 09-03-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RG43_RS08075 bc7bf55eca457e7f3382f1100b079077 161 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 71 1.4E-7 T 09-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 RG43_RS08075 bc7bf55eca457e7f3382f1100b079077 161 SUPERFAMILY SSF53254 1 143 1.41E-18 T 09-03-2017 IPR029033 Histidine phosphatase superfamily RG43_RS08075 bc7bf55eca457e7f3382f1100b079077 161 Gene3D G3DSA:3.40.50.1240 1 157 5.1E-43 T 09-03-2017 IPR029033 Histidine phosphatase superfamily RG43_RS08075 bc7bf55eca457e7f3382f1100b079077 161 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 152 5.6E-66 T 09-03-2017 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0008969 RG43_RS16990 a36de01a0f2ffbf6ce303135e19690d3 120 SUPERFAMILY SSF103084 2 117 6.02E-37 T 09-03-2017 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 RG43_RS16990 a36de01a0f2ffbf6ce303135e19690d3 120 PIRSF PIRSF001007 1 120 4.2E-50 T 09-03-2017 IPR016281 Crossover junction endodeoxyribonuclease, RusA GO:0008821 RG43_RS16990 a36de01a0f2ffbf6ce303135e19690d3 120 Gene3D G3DSA:3.30.1330.70 2 118 1.4E-42 T 09-03-2017 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 RG43_RS16990 a36de01a0f2ffbf6ce303135e19690d3 120 Pfam PF05866 Endodeoxyribonuclease RusA 9 115 1.5E-21 T 09-03-2017 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 RG43_RS25700 20f489df41748a3a8ac5f92d8bccfd75 382 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 180 211 - T 09-03-2017 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 RG43_RS25700 20f489df41748a3a8ac5f92d8bccfd75 382 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 15 107 8.3E-31 T 09-03-2017 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain RG43_RS25700 20f489df41748a3a8ac5f92d8bccfd75 382 SUPERFAMILY SSF51604 95 359 4.85E-72 T 09-03-2017 IPR029065 Enolase C-terminal domain-like RG43_RS25700 20f489df41748a3a8ac5f92d8bccfd75 382 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 82 107 - T 09-03-2017 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 RG43_RS25700 20f489df41748a3a8ac5f92d8bccfd75 382 SUPERFAMILY SSF54826 1 112 1.41E-32 T 09-03-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RG43_RS25700 20f489df41748a3a8ac5f92d8bccfd75 382 Gene3D G3DSA:3.20.20.120 117 341 1.5E-76 T 09-03-2017 IPR029065 Enolase C-terminal domain-like RG43_RS25700 20f489df41748a3a8ac5f92d8bccfd75 382 Hamap MF_01289 D-galactonate dehydratase [dgoD]. 1 382 76.497 T 09-03-2017 IPR023592 D-galactonate dehydratase GO:0008869|GO:0034194 KEGG: 00052+4.2.1.6 RG43_RS25700 20f489df41748a3a8ac5f92d8bccfd75 382 Gene3D G3DSA:3.30.390.10 1 116 4.2E-54 T 09-03-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RG43_RS25700 20f489df41748a3a8ac5f92d8bccfd75 382 SMART SM00922 125 230 1.0E-17 T 09-03-2017 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RG43_RS25700 20f489df41748a3a8ac5f92d8bccfd75 382 Pfam PF13378 Enolase C-terminal domain-like 135 355 2.3E-53 T 09-03-2017 IPR029065 Enolase C-terminal domain-like RG43_RS24875 a98377287f2eb0ce98dd38d43dc63644 324 PIRSF PIRSF017082 1 324 3.2E-105 T 09-03-2017 IPR005064 Bordetella uptake gene GO:0030288 RG43_RS24875 a98377287f2eb0ce98dd38d43dc63644 324 SUPERFAMILY SSF53850 120 289 2.1E-9 T 09-03-2017 RG43_RS24875 a98377287f2eb0ce98dd38d43dc63644 324 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 52 321 8.1E-59 T 09-03-2017 IPR005064 Bordetella uptake gene GO:0030288 RG43_RS09245 e5574e484f3d902008b2e988716e167c 1210 Pfam PF13569 Domain of unknown function (DUF4132) 954 1138 1.1E-42 T 09-03-2017 IPR025406 Domain of unknown function DUF4132 RG43_RS23540 adb57e3f44480e5363ebc53e1669672b 290 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 73 226 4.9E-54 T 09-03-2017 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 RG43_RS23540 adb57e3f44480e5363ebc53e1669672b 290 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 104 118 - T 09-03-2017 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 RG43_RS23540 adb57e3f44480e5363ebc53e1669672b 290 SMART SM00363 7 68 1.3E-13 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 RG43_RS23540 adb57e3f44480e5363ebc53e1669672b 290 Gene3D G3DSA:3.10.290.10 6 60 6.0E-21 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 RG43_RS23540 adb57e3f44480e5363ebc53e1669672b 290 SUPERFAMILY SSF55174 7 62 5.72E-14 T 09-03-2017 RG43_RS23540 adb57e3f44480e5363ebc53e1669672b 290 Pfam PF00849 RNA pseudouridylate synthase 69 195 5.1E-14 T 09-03-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RG43_RS23540 adb57e3f44480e5363ebc53e1669672b 290 SUPERFAMILY SSF55120 69 229 2.37E-38 T 09-03-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RG43_RS23540 adb57e3f44480e5363ebc53e1669672b 290 Pfam PF01479 S4 domain 7 52 5.5E-14 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 RG43_RS18635 6d41a83e06643bdacab599c5dd5ed77c 183 Pfam PF00156 Phosphoribosyl transferase domain 31 156 2.1E-15 T 09-03-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 RG43_RS18635 6d41a83e06643bdacab599c5dd5ed77c 183 Gene3D G3DSA:3.40.50.2020 7 179 8.4E-71 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like RG43_RS18635 6d41a83e06643bdacab599c5dd5ed77c 183 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 11 180 39.352 T 09-03-2017 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|Reactome: R-HSA-74217 RG43_RS18635 6d41a83e06643bdacab599c5dd5ed77c 183 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 11 178 2.8E-75 T 09-03-2017 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|Reactome: R-HSA-74217 RG43_RS18635 6d41a83e06643bdacab599c5dd5ed77c 183 SUPERFAMILY SSF53271 12 180 7.1E-53 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like RG43_RS22050 72874d66eb669efe6341c69a291f86ee 878 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 325 335 - T 09-03-2017 IPR018030 Fimbrial membrane usher, conserved site RG43_RS22050 72874d66eb669efe6341c69a291f86ee 878 Pfam PF00577 Outer membrane usher protein 208 790 3.0E-229 T 09-03-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 RG43_RS22050 72874d66eb669efe6341c69a291f86ee 878 Pfam PF13954 PapC N-terminal domain 48 193 6.5E-51 T 09-03-2017 IPR025885 PapC, N-terminal domain GO:0005515 RG43_RS22050 72874d66eb669efe6341c69a291f86ee 878 SUPERFAMILY SSF141729 46 170 1.44E-37 T 09-03-2017 RG43_RS22050 72874d66eb669efe6341c69a291f86ee 878 Pfam PF13953 PapC C-terminal domain 799 863 1.7E-25 T 09-03-2017 IPR025949 PapC-like, C-terminal domain RG43_RS06965 6cf2c2a0b2821cc99d1c7ad09f5b78ec 237 ProDom PD117379 LIPOPROTEIN YFHG HELIX ALPHA REGULATOR MEMBRANE TRANSCRIPTIONAL FAMILIIY EBP TWO-COMPONENT 27 218 1.0E-92 T 09-03-2017 RG43_RS06965 6cf2c2a0b2821cc99d1c7ad09f5b78ec 237 Pfam PF13942 YfhG lipoprotein 45 217 5.4E-76 T 09-03-2017 IPR025262 Quorum-sensing regulator protein G RG43_RS03960 079b777395af2edabff83f6e9be53ba2 271 Gene3D G3DSA:3.40.830.10 6 271 3.8E-100 T 09-03-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 RG43_RS03960 079b777395af2edabff83f6e9be53ba2 271 SUPERFAMILY SSF53213 14 271 1.57E-90 T 09-03-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 RG43_RS03960 079b777395af2edabff83f6e9be53ba2 271 PIRSF PIRSF006157 10 271 6.5E-94 T 09-03-2017 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type GO:0008270|GO:0016701|GO:0055114 RG43_RS03960 079b777395af2edabff83f6e9be53ba2 271 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 18 266 2.6E-24 T 09-03-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 RG43_RS26335 079b777395af2edabff83f6e9be53ba2 271 Gene3D G3DSA:3.40.830.10 6 271 3.8E-100 T 09-03-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 RG43_RS26335 079b777395af2edabff83f6e9be53ba2 271 SUPERFAMILY SSF53213 14 271 1.57E-90 T 09-03-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 RG43_RS26335 079b777395af2edabff83f6e9be53ba2 271 PIRSF PIRSF006157 10 271 6.5E-94 T 09-03-2017 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type GO:0008270|GO:0016701|GO:0055114 RG43_RS26335 079b777395af2edabff83f6e9be53ba2 271 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 18 266 2.6E-24 T 09-03-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 RG43_RS01280 b06069eed9d51d080555c57448ff8e0a 190 Pfam PF03729 Short repeat of unknown function (DUF308) 27 97 5.7E-12 T 09-03-2017 IPR005325 Protein of unknown function DUF308, membrane RG43_RS01280 b06069eed9d51d080555c57448ff8e0a 190 Pfam PF03729 Short repeat of unknown function (DUF308) 84 153 4.9E-8 T 09-03-2017 IPR005325 Protein of unknown function DUF308, membrane RG43_RS26060 5dee3d24b8bd1c0d3078866b970b2eb6 147 Pfam PF10881 Protein of unknown function (DUF2726) 10 120 6.7E-24 T 09-03-2017 IPR024402 Domain of unknown function DUF2726 RG43_RS09580 83237e40a365a0ed58f5aadb45a0e55a 321 Gene3D G3DSA:3.90.25.10 300 318 5.1E-13 T 09-03-2017 RG43_RS09580 83237e40a365a0ed58f5aadb45a0e55a 321 Gene3D G3DSA:3.90.25.10 205 219 5.1E-13 T 09-03-2017 RG43_RS09580 83237e40a365a0ed58f5aadb45a0e55a 321 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 228 5.6E-73 T 09-03-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RG43_RS09580 83237e40a365a0ed58f5aadb45a0e55a 321 SUPERFAMILY SSF51735 1 318 2.25E-73 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS09580 83237e40a365a0ed58f5aadb45a0e55a 321 Gene3D G3DSA:3.90.25.10 259 299 1.6E-39 T 09-03-2017 RG43_RS09580 83237e40a365a0ed58f5aadb45a0e55a 321 Gene3D G3DSA:3.90.25.10 169 204 1.6E-39 T 09-03-2017 RG43_RS09580 83237e40a365a0ed58f5aadb45a0e55a 321 Gene3D G3DSA:3.40.50.720 220 258 2.5E-45 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS09580 83237e40a365a0ed58f5aadb45a0e55a 321 Gene3D G3DSA:3.40.50.720 1 168 2.5E-45 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS09580 83237e40a365a0ed58f5aadb45a0e55a 321 Hamap MF_00956 GDP-L-fucose synthase [fcl]. 3 314 49.395 T 09-03-2017 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase GO:0009226|GO:0016491 KEGG: 00010+1.1.1.27|KEGG: 00051+1.1.1.271|KEGG: 00270+1.1.1.27|KEGG: 00520+1.1.1.271|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-66|MetaCyc: PWY-6901|Reactome: R-HSA-6787639 RG43_RS08820 157a1dffc1c88c9cf3998d3a1bc58475 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 207 2.3E-24 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS08820 157a1dffc1c88c9cf3998d3a1bc58475 215 SUPERFAMILY SSF52172 7 137 2.7E-34 T 09-03-2017 IPR011006 CheY-like superfamily RG43_RS08820 157a1dffc1c88c9cf3998d3a1bc58475 215 SUPERFAMILY SSF46894 137 210 7.48E-22 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RG43_RS08820 157a1dffc1c88c9cf3998d3a1bc58475 215 Pfam PF00072 Response regulator receiver domain 9 121 5.2E-31 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS08820 157a1dffc1c88c9cf3998d3a1bc58475 215 SMART SM00421 151 208 3.4E-24 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS08820 157a1dffc1c88c9cf3998d3a1bc58475 215 ProSitePatterns PS00622 LuxR-type HTH domain signature. 168 195 - T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS08820 157a1dffc1c88c9cf3998d3a1bc58475 215 SMART SM00448 7 120 1.6E-33 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS08820 157a1dffc1c88c9cf3998d3a1bc58475 215 Gene3D G3DSA:1.10.10.10 155 211 4.9E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS08820 157a1dffc1c88c9cf3998d3a1bc58475 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 2.7E-15 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS08820 157a1dffc1c88c9cf3998d3a1bc58475 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 2.7E-15 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS08820 157a1dffc1c88c9cf3998d3a1bc58475 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 2.7E-15 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS08820 157a1dffc1c88c9cf3998d3a1bc58475 215 Gene3D G3DSA:3.40.50.2300 6 154 2.4E-38 T 09-03-2017 RG43_RS12095 de8546a0bb2ecabc0b79aeeb06cc0e06 237 Gene3D G3DSA:3.20.20.450 13 236 5.2E-8 T 09-03-2017 IPR001633 EAL domain RG43_RS12095 de8546a0bb2ecabc0b79aeeb06cc0e06 237 SUPERFAMILY SSF141868 13 230 8.89E-12 T 09-03-2017 IPR001633 EAL domain RG43_RS12095 de8546a0bb2ecabc0b79aeeb06cc0e06 237 Pfam PF00563 EAL domain 13 222 2.0E-9 T 09-03-2017 IPR001633 EAL domain RG43_RS15905 3d48ae8a9644d294444bcc3a84ba44bd 255 SMART SM00382 36 210 2.4E-14 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS15905 3d48ae8a9644d294444bcc3a84ba44bd 255 SUPERFAMILY SSF52540 13 213 8.36E-64 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS15905 3d48ae8a9644d294444bcc3a84ba44bd 255 Gene3D G3DSA:3.40.50.300 12 212 3.1E-62 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS15905 3d48ae8a9644d294444bcc3a84ba44bd 255 Pfam PF00005 ABC transporter 27 160 2.9E-29 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS15905 3d48ae8a9644d294444bcc3a84ba44bd 255 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS12990 58693d84a17299a7d62f80be6ca573a0 88 Gene3D G3DSA:1.10.260.40 10 76 3.0E-15 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS12990 58693d84a17299a7d62f80be6ca573a0 88 Pfam PF01381 Helix-turn-helix 18 69 1.2E-14 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RG43_RS12990 58693d84a17299a7d62f80be6ca573a0 88 SUPERFAMILY SSF47413 5 71 2.47E-17 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS12990 58693d84a17299a7d62f80be6ca573a0 88 SMART SM00530 16 71 2.1E-10 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RG43_RS06730 701135522c3012a8c59eacc963f57edb 245 Pfam PF13525 Outer membrane lipoprotein 28 236 5.9E-85 T 09-03-2017 RG43_RS06730 701135522c3012a8c59eacc963f57edb 245 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 4 242 39.413 T 09-03-2017 IPR017689 Outer membrane protein assembly factor BamD RG43_RS06730 701135522c3012a8c59eacc963f57edb 245 SUPERFAMILY SSF48452 27 121 2.34E-9 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS06730 701135522c3012a8c59eacc963f57edb 245 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 5 243 2.0E-88 T 09-03-2017 IPR017689 Outer membrane protein assembly factor BamD RG43_RS06730 701135522c3012a8c59eacc963f57edb 245 Gene3D G3DSA:1.25.40.10 29 234 7.2E-6 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS15695 2604795b96b4bfcd897590422134b767 378 PIRSF PIRSF000267 2 377 2.1E-117 T 09-03-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 RG43_RS15695 2604795b96b4bfcd897590422134b767 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 361 1.5E-97 T 09-03-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 RG43_RS15695 2604795b96b4bfcd897590422134b767 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 5.9E-199 T 09-03-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 RG43_RS26720 e285b8f667e13c1b5eca1fd2abd2b03a 82 Pfam PF00550 Phosphopantetheine attachment site 10 74 5.3E-13 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain RG43_RS26720 e285b8f667e13c1b5eca1fd2abd2b03a 82 ProSitePatterns PS00012 Phosphopantetheine attachment site. 34 49 - T 09-03-2017 IPR006162 Phosphopantetheine attachment site RG43_RS26720 e285b8f667e13c1b5eca1fd2abd2b03a 82 Gene3D G3DSA:1.10.1200.10 3 74 1.6E-14 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain RG43_RS26720 e285b8f667e13c1b5eca1fd2abd2b03a 82 SUPERFAMILY SSF47336 3 79 5.1E-16 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain RG43_RS04345 e285b8f667e13c1b5eca1fd2abd2b03a 82 Pfam PF00550 Phosphopantetheine attachment site 10 74 5.3E-13 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain RG43_RS04345 e285b8f667e13c1b5eca1fd2abd2b03a 82 ProSitePatterns PS00012 Phosphopantetheine attachment site. 34 49 - T 09-03-2017 IPR006162 Phosphopantetheine attachment site RG43_RS04345 e285b8f667e13c1b5eca1fd2abd2b03a 82 Gene3D G3DSA:1.10.1200.10 3 74 1.6E-14 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain RG43_RS04345 e285b8f667e13c1b5eca1fd2abd2b03a 82 SUPERFAMILY SSF47336 3 79 5.1E-16 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain RG43_RS15950 679f9d441d38637cd2f65af2dc47cc11 182 Gene3D G3DSA:3.30.1380.10 67 182 4.1E-29 T 09-03-2017 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 RG43_RS15950 679f9d441d38637cd2f65af2dc47cc11 182 Pfam PF05951 Bacterial protein of unknown function (DUF882) 34 182 1.2E-61 T 09-03-2017 IPR010275 Protein of unknown function DUF882 RG43_RS15950 679f9d441d38637cd2f65af2dc47cc11 182 SUPERFAMILY SSF55166 68 182 1.33E-31 T 09-03-2017 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 RG43_RS03335 9d0bcd0fd0837fdb501400c28e0dff64 444 PIRSF PIRSF002808 2 444 4.0E-36 T 09-03-2017 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 RG43_RS03335 9d0bcd0fd0837fdb501400c28e0dff64 444 Gene3D G3DSA:1.20.1250.20 243 441 5.3E-35 T 09-03-2017 RG43_RS03335 9d0bcd0fd0837fdb501400c28e0dff64 444 Gene3D G3DSA:1.20.1250.20 15 214 2.8E-45 T 09-03-2017 RG43_RS03335 9d0bcd0fd0837fdb501400c28e0dff64 444 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 25 434 1.7E-137 T 09-03-2017 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 RG43_RS03335 9d0bcd0fd0837fdb501400c28e0dff64 444 Pfam PF07690 Major Facilitator Superfamily 23 365 3.5E-47 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS03335 9d0bcd0fd0837fdb501400c28e0dff64 444 SUPERFAMILY SSF103473 6 443 1.24E-78 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS04935 b8c3da781e2f6c9b1e0521bcfdb22691 348 Gene3D G3DSA:3.40.50.1170 23 231 3.0E-76 T 09-03-2017 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 RG43_RS04935 b8c3da781e2f6c9b1e0521bcfdb22691 348 PRINTS PR00139 Asparaginase/glutaminase family signature 26 37 3.0E-23 T 09-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 RG43_RS04935 b8c3da781e2f6c9b1e0521bcfdb22691 348 PRINTS PR00139 Asparaginase/glutaminase family signature 282 300 3.0E-23 T 09-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 RG43_RS04935 b8c3da781e2f6c9b1e0521bcfdb22691 348 PRINTS PR00139 Asparaginase/glutaminase family signature 103 121 3.0E-23 T 09-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 RG43_RS04935 b8c3da781e2f6c9b1e0521bcfdb22691 348 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 1 348 2.7E-170 T 09-03-2017 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 RG43_RS04935 b8c3da781e2f6c9b1e0521bcfdb22691 348 Pfam PF00710 Asparaginase, N-terminal 25 216 2.0E-63 T 09-03-2017 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 RG43_RS04935 b8c3da781e2f6c9b1e0521bcfdb22691 348 SMART SM00870 25 342 4.5E-147 T 09-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 RG43_RS04935 b8c3da781e2f6c9b1e0521bcfdb22691 348 Gene3D G3DSA:3.40.50.40 235 346 1.9E-41 T 09-03-2017 IPR027473 L-asparaginase, C-terminal domain Reactome: R-HSA-70614 RG43_RS04935 b8c3da781e2f6c9b1e0521bcfdb22691 348 SUPERFAMILY SSF53774 23 347 1.13E-109 T 09-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 RG43_RS04935 b8c3da781e2f6c9b1e0521bcfdb22691 348 PIRSF PIRSF500176 22 348 1.1E-82 T 09-03-2017 RG43_RS04935 b8c3da781e2f6c9b1e0521bcfdb22691 348 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 104 114 - T 09-03-2017 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 RG43_RS04935 b8c3da781e2f6c9b1e0521bcfdb22691 348 PIRSF PIRSF001220 20 348 7.3E-94 T 09-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 RG43_RS04935 b8c3da781e2f6c9b1e0521bcfdb22691 348 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 28 36 - T 09-03-2017 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 RG43_RS15665 7e05355a2f9a6bb99123a7f5ea8a519d 698 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 33 690 2.3E-266 T 09-03-2017 IPR010344 Exopolysaccharide biosynthesis protein YbjH RG43_RS25200 8b0baa764b3fa8a206ea1f652074a514 355 Gene3D G3DSA:3.90.25.10 193 344 1.2E-56 T 09-03-2017 RG43_RS25200 8b0baa764b3fa8a206ea1f652074a514 355 SUPERFAMILY SSF51735 1 338 2.66E-96 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS25200 8b0baa764b3fa8a206ea1f652074a514 355 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 327 2.3E-99 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS25200 8b0baa764b3fa8a206ea1f652074a514 355 Gene3D G3DSA:3.40.50.720 1 192 1.4E-65 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS25200 8b0baa764b3fa8a206ea1f652074a514 355 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 3 341 1.1E-163 T 09-03-2017 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 RG43_RS22515 e5627408e2fc40eb9c6a1116a2708f64 104 PIRSF PIRSF003135 1 101 2.1E-50 T 09-03-2017 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 RG43_RS22515 e5627408e2fc40eb9c6a1116a2708f64 104 Gene3D G3DSA:2.40.50.140 1 103 2.1E-43 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS22515 e5627408e2fc40eb9c6a1116a2708f64 104 Pfam PF00436 Single-strand binding protein family 3 87 5.4E-13 T 09-03-2017 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 RG43_RS22515 e5627408e2fc40eb9c6a1116a2708f64 104 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 3 99 1.6E-36 T 09-03-2017 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 RG43_RS22515 e5627408e2fc40eb9c6a1116a2708f64 104 Hamap MF_00720 Primosomal replication protein n [priB]. 1 100 30.683 T 09-03-2017 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 RG43_RS22515 e5627408e2fc40eb9c6a1116a2708f64 104 SUPERFAMILY SSF50249 1 103 1.75E-29 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS05600 09a2866f0f49c6617e03e29ff8ecc127 1122 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1087 0.0 T 09-03-2017 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 RG43_RS05600 09a2866f0f49c6617e03e29ff8ecc127 1122 SUPERFAMILY SSF52540 1 347 1.59E-129 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS05600 09a2866f0f49c6617e03e29ff8ecc127 1122 SUPERFAMILY SSF52980 820 1120 1.77E-99 T 09-03-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 RG43_RS05600 09a2866f0f49c6617e03e29ff8ecc127 1122 SUPERFAMILY SSF52540 359 813 5.1E-109 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS05600 09a2866f0f49c6617e03e29ff8ecc127 1122 PIRSF PIRSF000980 1 1122 0.0 T 09-03-2017 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 RG43_RS05600 09a2866f0f49c6617e03e29ff8ecc127 1122 Gene3D G3DSA:3.40.50.300 342 455 6.7E-8 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS05600 09a2866f0f49c6617e03e29ff8ecc127 1122 Gene3D G3DSA:3.40.50.300 657 752 6.7E-8 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS05600 09a2866f0f49c6617e03e29ff8ecc127 1122 Gene3D G3DSA:1.10.10.160 86 183 4.7E-33 T 09-03-2017 IPR013986 DExx box DNA helicase domain RG43_RS05600 09a2866f0f49c6617e03e29ff8ecc127 1122 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1122 21.251 T 09-03-2017 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 RG43_RS05600 09a2866f0f49c6617e03e29ff8ecc127 1122 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 1 806 0.0 T 09-03-2017 RG43_RS13005 fb852f04b02731bfdc7a3014df59b316 187 Pfam PF00419 Fimbrial protein 39 186 1.3E-20 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS13005 fb852f04b02731bfdc7a3014df59b316 187 SUPERFAMILY SSF49401 39 186 2.04E-36 T 09-03-2017 IPR008966 Adhesion domain RG43_RS13005 fb852f04b02731bfdc7a3014df59b316 187 Gene3D G3DSA:2.60.40.1090 37 186 3.8E-43 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS19135 1e6da13a61253c7b8ef7419923aedeca 222 Pfam PF15977 Winged helix-turn-helix DNA binding 153 220 1.7E-29 T 09-03-2017 RG43_RS19135 1e6da13a61253c7b8ef7419923aedeca 222 SUPERFAMILY SSF51206 39 138 2.63E-5 T 09-03-2017 IPR018490 Cyclic nucleotide-binding-like RG43_RS19135 1e6da13a61253c7b8ef7419923aedeca 222 Gene3D G3DSA:1.10.10.10 153 218 3.5E-4 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS22200 c1ce4550f2fd26228902b5e45090e656 138 Pfam PF06877 Regulator of ribonuclease activity B 12 113 1.5E-33 T 09-03-2017 IPR009671 Regulator of ribonuclease activity B domain RG43_RS22200 c1ce4550f2fd26228902b5e45090e656 138 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 4 117 31.689 T 09-03-2017 IPR016716 Regulator of ribonuclease activity B RG43_RS22200 c1ce4550f2fd26228902b5e45090e656 138 PIRSF PIRSF018193 1 138 1.4E-67 T 09-03-2017 IPR016716 Regulator of ribonuclease activity B RG43_RS22200 c1ce4550f2fd26228902b5e45090e656 138 Gene3D G3DSA:3.30.70.970 1 124 1.7E-55 T 09-03-2017 IPR009671 Regulator of ribonuclease activity B domain RG43_RS22200 c1ce4550f2fd26228902b5e45090e656 138 SUPERFAMILY SSF89946 2 122 7.45E-43 T 09-03-2017 IPR009671 Regulator of ribonuclease activity B domain RG43_RS01630 37548f635b68dea3138128a61e47bfbc 237 PIRSF PIRSF039137 1 237 4.3E-104 T 09-03-2017 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 RG43_RS01630 37548f635b68dea3138128a61e47bfbc 237 SMART SM00382 30 216 6.7E-4 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS01630 37548f635b68dea3138128a61e47bfbc 237 Gene3D G3DSA:3.40.50.300 2 232 1.7E-63 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS01630 37548f635b68dea3138128a61e47bfbc 237 Pfam PF00005 ABC transporter 21 165 2.4E-33 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS01630 37548f635b68dea3138128a61e47bfbc 237 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS01630 37548f635b68dea3138128a61e47bfbc 237 SUPERFAMILY SSF52540 4 234 8.31E-61 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS19600 9515c84ce0e80ff58be67c618687cc3d 46 SUPERFAMILY SSF57840 1 41 6.15E-14 T 09-03-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS19600 9515c84ce0e80ff58be67c618687cc3d 46 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 16.791 T 09-03-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS19600 9515c84ce0e80ff58be67c618687cc3d 46 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 09-03-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS19600 9515c84ce0e80ff58be67c618687cc3d 46 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 41 1.7E-8 T 09-03-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS19600 9515c84ce0e80ff58be67c618687cc3d 46 Pfam PF00444 Ribosomal protein L36 1 41 2.2E-17 T 09-03-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS15925 2d207fb81116741552eeb7ee964cf312 466 SUPERFAMILY SSF50249 16 101 1.82E-17 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS15925 2d207fb81116741552eeb7ee964cf312 466 Gene3D G3DSA:3.30.930.10 109 462 2.4E-111 T 09-03-2017 RG43_RS15925 2d207fb81116741552eeb7ee964cf312 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 46.355 T 09-03-2017 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 RG43_RS15925 2d207fb81116741552eeb7ee964cf312 466 Gene3D G3DSA:2.40.50.140 16 103 2.0E-16 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS15925 2d207fb81116741552eeb7ee964cf312 466 SUPERFAMILY SSF55681 98 464 1.06E-95 T 09-03-2017 RG43_RS15925 2d207fb81116741552eeb7ee964cf312 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 3.8E-14 T 09-03-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS15925 2d207fb81116741552eeb7ee964cf312 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 3.8E-14 T 09-03-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS15925 2d207fb81116741552eeb7ee964cf312 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 3.8E-14 T 09-03-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS15925 2d207fb81116741552eeb7ee964cf312 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 3.8E-14 T 09-03-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS15925 2d207fb81116741552eeb7ee964cf312 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 3.7E-82 T 09-03-2017 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS15925 2d207fb81116741552eeb7ee964cf312 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 1.6E-212 T 09-03-2017 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 RG43_RS15925 2d207fb81116741552eeb7ee964cf312 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 1.8E-12 T 09-03-2017 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 RG43_RS12615 c128f9469c8d39ee264829028513067c 467 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 09-03-2017 IPR020557 Fumarate lyase, conserved site GO:0003824 RG43_RS12615 c128f9469c8d39ee264829028513067c 467 Gene3D G3DSA:1.10.275.10 3 138 3.2E-61 T 09-03-2017 IPR024083 Fumarase/histidase, N-terminal RG43_RS12615 c128f9469c8d39ee264829028513067c 467 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 462 91.845 T 09-03-2017 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 RG43_RS12615 c128f9469c8d39ee264829028513067c 467 Gene3D G3DSA:1.20.200.10 139 416 9.5E-105 T 09-03-2017 RG43_RS12615 c128f9469c8d39ee264829028513067c 467 SUPERFAMILY SSF48557 5 459 4.56E-159 T 09-03-2017 IPR008948 L-Aspartase-like GO:0003824 RG43_RS12615 c128f9469c8d39ee264829028513067c 467 PRINTS PR00149 Fumarate lyase superfamily signature 134 152 1.3E-34 T 09-03-2017 IPR000362 Fumarate lyase family RG43_RS12615 c128f9469c8d39ee264829028513067c 467 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 1.3E-34 T 09-03-2017 IPR000362 Fumarate lyase family RG43_RS12615 c128f9469c8d39ee264829028513067c 467 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 1.3E-34 T 09-03-2017 IPR000362 Fumarate lyase family RG43_RS12615 c128f9469c8d39ee264829028513067c 467 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 1.3E-34 T 09-03-2017 IPR000362 Fumarate lyase family RG43_RS12615 c128f9469c8d39ee264829028513067c 467 Pfam PF00206 Lyase 12 342 1.6E-124 T 09-03-2017 IPR022761 Fumarate lyase, N-terminal RG43_RS12615 c128f9469c8d39ee264829028513067c 467 Pfam PF10415 Fumarase C C-terminus 408 461 1.5E-25 T 09-03-2017 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 RG43_RS12615 c128f9469c8d39ee264829028513067c 467 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 4 461 1.1E-254 T 09-03-2017 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 RG43_RS12615 c128f9469c8d39ee264829028513067c 467 Gene3D G3DSA:1.10.40.30 417 462 5.8E-33 T 09-03-2017 RG43_RS00545 79ee4cfd255906487645a5993f85b1d1 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 1.2E-27 T 09-03-2017 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS00545 79ee4cfd255906487645a5993f85b1d1 78 SUPERFAMILY SSF143800 2 77 6.28E-30 T 09-03-2017 RG43_RS00545 79ee4cfd255906487645a5993f85b1d1 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.212 T 09-03-2017 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS00545 79ee4cfd255906487645a5993f85b1d1 78 Gene3D G3DSA:2.30.170.40 2 77 7.8E-36 T 09-03-2017 RG43_RS00545 79ee4cfd255906487645a5993f85b1d1 78 Pfam PF00830 Ribosomal L28 family 3 62 1.6E-25 T 09-03-2017 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS00835 6bd095a384800e10f6dbd1918830239d 220 SMART SM00934 5 207 9.9E-35 T 09-03-2017 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RG43_RS00835 6bd095a384800e10f6dbd1918830239d 220 SUPERFAMILY SSF51366 2 215 2.77E-36 T 09-03-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RG43_RS00835 6bd095a384800e10f6dbd1918830239d 220 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 204 7.3E-29 T 09-03-2017 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RG43_RS00835 6bd095a384800e10f6dbd1918830239d 220 Gene3D G3DSA:3.20.20.70 1 215 6.9E-79 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS15890 7d1892717fe251cf95743c7f235f7330 319 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 29 309 2.9E-87 T 09-03-2017 IPR010067 Aliphatic sulfonates-binding protein GO:0006790|GO:0006810|GO:0016020 RG43_RS15890 7d1892717fe251cf95743c7f235f7330 319 SUPERFAMILY SSF53850 26 258 6.58E-51 T 09-03-2017 RG43_RS15890 7d1892717fe251cf95743c7f235f7330 319 Pfam PF09084 NMT1/THI5 like 67 183 1.2E-12 T 09-03-2017 IPR015168 SsuA/THI5-like RG43_RS15890 7d1892717fe251cf95743c7f235f7330 319 SMART SM00062 28 249 3.5E-37 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RG43_RS15890 7d1892717fe251cf95743c7f235f7330 319 Gene3D G3DSA:3.40.190.10 30 80 9.3E-4 T 09-03-2017 RG43_RS15890 7d1892717fe251cf95743c7f235f7330 319 Gene3D G3DSA:3.40.190.10 110 229 9.4E-32 T 09-03-2017 RG43_RS14190 ce82713da2763efb1eadd41790172833 247 Hamap MF_01067 UPF0259 membrane protein YciC [yciC]. 1 247 24.199 T 09-03-2017 IPR009627 Uncharacterised protein family UPF0259 RG43_RS14190 ce82713da2763efb1eadd41790172833 247 Pfam PF06790 Uncharacterised protein family (UPF0259) 1 244 2.6E-104 T 09-03-2017 IPR009627 Uncharacterised protein family UPF0259 RG43_RS20110 f668b1332cd34a71a5ba404826e187b0 256 Pfam PF00795 Carbon-nitrogen hydrolase 6 241 4.6E-32 T 09-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RG43_RS20110 f668b1332cd34a71a5ba404826e187b0 256 SUPERFAMILY SSF56317 4 249 3.4E-61 T 09-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RG43_RS20110 f668b1332cd34a71a5ba404826e187b0 256 Gene3D G3DSA:3.60.110.10 4 251 1.0E-59 T 09-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RG43_RS20110 f668b1332cd34a71a5ba404826e187b0 256 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 137 157 - T 09-03-2017 IPR001110 Uncharacterised protein family UPF0012, conserved site RG43_RS05900 f2603744fde33f57a35b72612c21b015 450 Gene3D G3DSA:1.20.1250.20 245 442 6.0E-33 T 09-03-2017 RG43_RS05900 f2603744fde33f57a35b72612c21b015 450 Gene3D G3DSA:1.20.1250.20 14 214 3.2E-46 T 09-03-2017 RG43_RS05900 f2603744fde33f57a35b72612c21b015 450 Pfam PF07690 Major Facilitator Superfamily 25 318 1.4E-47 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS05900 f2603744fde33f57a35b72612c21b015 450 SUPERFAMILY SSF103473 13 444 1.96E-81 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS05900 f2603744fde33f57a35b72612c21b015 450 PIRSF PIRSF002808 2 448 1.2E-43 T 09-03-2017 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 RG43_RS05900 f2603744fde33f57a35b72612c21b015 450 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 27 436 2.4E-162 T 09-03-2017 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 RG43_RS16410 fc75888a032d59ad0ef8f5c7c9716233 198 SUPERFAMILY SSF48317 1 196 1.07E-42 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RG43_RS16410 fc75888a032d59ad0ef8f5c7c9716233 198 SMART SM00014 57 165 6.0E-32 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RG43_RS16410 fc75888a032d59ad0ef8f5c7c9716233 198 Pfam PF01569 PAP2 superfamily 58 166 2.2E-13 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RG43_RS16410 fc75888a032d59ad0ef8f5c7c9716233 198 Gene3D G3DSA:1.20.144.10 3 165 3.8E-27 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RG43_RS05850 5d153e737e3c195de6d3431fe1c1af1e 281 SUPERFAMILY SSF88723 34 189 4.91E-37 T 09-03-2017 IPR029060 PIN domain-like RG43_RS05850 5d153e737e3c195de6d3431fe1c1af1e 281 Gene3D G3DSA:1.10.150.20 205 265 3.1E-24 T 09-03-2017 RG43_RS05850 5d153e737e3c195de6d3431fe1c1af1e 281 SMART SM00279 192 227 4.2E-11 T 09-03-2017 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 RG43_RS05850 5d153e737e3c195de6d3431fe1c1af1e 281 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 190 279 3.1E-25 T 09-03-2017 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 RG43_RS05850 5d153e737e3c195de6d3431fe1c1af1e 281 SUPERFAMILY SSF47807 190 273 5.83E-23 T 09-03-2017 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 RG43_RS05850 5d153e737e3c195de6d3431fe1c1af1e 281 SMART SM00475 33 280 1.9E-108 T 09-03-2017 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 RG43_RS05850 5d153e737e3c195de6d3431fe1c1af1e 281 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 35 176 3.0E-28 T 09-03-2017 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 RG43_RS05850 5d153e737e3c195de6d3431fe1c1af1e 281 Hamap MF_01192 Flap endonuclease Xni [xni]. 32 281 45.775 T 09-03-2017 IPR022895 Flap endonuclease Xni GO:0048256 RG43_RS05850 5d153e737e3c195de6d3431fe1c1af1e 281 Gene3D G3DSA:3.40.50.1010 34 204 1.2E-48 T 09-03-2017 IPR029060 PIN domain-like RG43_RS20515 b5abe0e4ba43c7022706e51a01de9d6d 235 Pfam PF01980 Uncharacterised protein family UPF0066 21 142 1.2E-41 T 09-03-2017 IPR023370 TsaA-like domain RG43_RS20515 b5abe0e4ba43c7022706e51a01de9d6d 235 SUPERFAMILY SSF118196 1 229 8.63E-85 T 09-03-2017 IPR023370 TsaA-like domain RG43_RS20515 b5abe0e4ba43c7022706e51a01de9d6d 235 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 1 149 3.4E-62 T 09-03-2017 IPR023370 TsaA-like domain RG43_RS20515 b5abe0e4ba43c7022706e51a01de9d6d 235 ProSitePatterns PS01318 TsaA-like domain signature. 87 98 - T 09-03-2017 IPR023368 Uncharacterised protein family UPF0066, conserved site RG43_RS20515 b5abe0e4ba43c7022706e51a01de9d6d 235 Gene3D G3DSA:2.40.30.70 4 157 1.1E-52 T 09-03-2017 IPR023370 TsaA-like domain RG43_RS01190 1e1678abeaec7dbf7fa76947709f28c3 309 Pfam PF00294 pfkB family carbohydrate kinase 3 305 1.1E-74 T 09-03-2017 IPR011611 Carbohydrate kinase PfkB RG43_RS01190 1e1678abeaec7dbf7fa76947709f28c3 309 SUPERFAMILY SSF53613 2 302 6.39E-74 T 09-03-2017 IPR029056 Ribokinase-like RG43_RS01190 1e1678abeaec7dbf7fa76947709f28c3 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 258 271 - T 09-03-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RG43_RS01190 1e1678abeaec7dbf7fa76947709f28c3 309 Gene3D G3DSA:3.40.1190.20 2 304 2.6E-77 T 09-03-2017 IPR029056 Ribokinase-like RG43_RS01070 d03839ac745ddbaf94d5a9a460a0aa79 327 Pfam PF00005 ABC transporter 24 181 3.7E-28 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS01070 d03839ac745ddbaf94d5a9a460a0aa79 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 317 5.4E-28 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RG43_RS01070 d03839ac745ddbaf94d5a9a460a0aa79 327 SMART SM00382 32 231 6.1E-13 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS01070 d03839ac745ddbaf94d5a9a460a0aa79 327 SUPERFAMILY SSF52540 31 307 1.18E-64 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS01070 d03839ac745ddbaf94d5a9a460a0aa79 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 2.2E-18 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RG43_RS01070 d03839ac745ddbaf94d5a9a460a0aa79 327 Gene3D G3DSA:3.40.50.300 2 255 1.8E-70 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS01070 d03839ac745ddbaf94d5a9a460a0aa79 327 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS09250 f4f3d6b4ff4affa35b12336516486cef 1010 SMART SM00773 1 71 1.9E-15 T 09-03-2017 IPR008893 WGR domain RG43_RS09250 f4f3d6b4ff4affa35b12336516486cef 1010 Pfam PF13569 Domain of unknown function (DUF4132) 734 919 4.3E-47 T 09-03-2017 IPR025406 Domain of unknown function DUF4132 RG43_RS09250 f4f3d6b4ff4affa35b12336516486cef 1010 Pfam PF05406 WGR domain 8 69 4.2E-16 T 09-03-2017 IPR008893 WGR domain RG43_RS09250 f4f3d6b4ff4affa35b12336516486cef 1010 Gene3D G3DSA:2.20.140.10 1 72 9.6E-31 T 09-03-2017 IPR008893 WGR domain RG43_RS09250 f4f3d6b4ff4affa35b12336516486cef 1010 SUPERFAMILY SSF142921 11 67 2.09E-8 T 09-03-2017 IPR008893 WGR domain RG43_RS25590 853fe4147ab788ba685c6f9176db40c5 319 SUPERFAMILY SSF53850 98 314 3.12E-27 T 09-03-2017 RG43_RS25590 853fe4147ab788ba685c6f9176db40c5 319 Pfam PF03466 LysR substrate binding domain 106 313 3.1E-16 T 09-03-2017 IPR005119 LysR, substrate-binding RG43_RS25590 853fe4147ab788ba685c6f9176db40c5 319 Gene3D G3DSA:3.40.190.10 290 318 3.1E-16 T 09-03-2017 RG43_RS25590 853fe4147ab788ba685c6f9176db40c5 319 Gene3D G3DSA:3.40.190.10 98 181 3.1E-16 T 09-03-2017 RG43_RS25590 853fe4147ab788ba685c6f9176db40c5 319 SUPERFAMILY SSF46785 7 81 3.77E-14 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS25590 853fe4147ab788ba685c6f9176db40c5 319 Gene3D G3DSA:3.40.190.10 182 279 4.7E-28 T 09-03-2017 RG43_RS25590 853fe4147ab788ba685c6f9176db40c5 319 Hamap MF_01607 HTH-type transcriptional regulator YidZ [yidZ]. 1 319 73.326 T 09-03-2017 IPR023746 Transcription regulator HTH, YidZ GO:0003700|GO:0006355 RG43_RS25590 853fe4147ab788ba685c6f9176db40c5 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 1.8E-13 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS25590 853fe4147ab788ba685c6f9176db40c5 319 Gene3D G3DSA:1.10.10.10 2 87 2.6E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS13790 e486afb379e75f72565865724e783205 465 PIRSF PIRSF019381 1 465 5.6E-216 T 09-03-2017 IPR007413 Protein of unknown function DUF463, YcjX-like protein RG43_RS13790 e486afb379e75f72565865724e783205 465 Pfam PF04317 YcjX-like family, DUF463 20 464 1.3E-184 T 09-03-2017 IPR007413 Protein of unknown function DUF463, YcjX-like protein RG43_RS08190 3c53da59a6c7493907e842d6172012f5 219 Pfam PF09335 SNARE associated Golgi protein 49 176 4.5E-27 T 09-03-2017 IPR032816 SNARE associated Golgi protein RG43_RS21120 74b8bb8a0b87bc1bcfef926b01b7f284 588 Pfam PF00905 Penicillin binding protein transpeptidase domain 260 554 2.6E-82 T 09-03-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RG43_RS21120 74b8bb8a0b87bc1bcfef926b01b7f284 588 SUPERFAMILY SSF56519 63 233 1.23E-46 T 09-03-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 RG43_RS21120 74b8bb8a0b87bc1bcfef926b01b7f284 588 SUPERFAMILY SSF56601 235 563 1.61E-86 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like RG43_RS21120 74b8bb8a0b87bc1bcfef926b01b7f284 588 Gene3D G3DSA:3.40.710.10 242 560 3.2E-85 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like RG43_RS21120 74b8bb8a0b87bc1bcfef926b01b7f284 588 Gene3D G3DSA:3.90.1310.10 142 241 3.7E-33 T 09-03-2017 RG43_RS21120 74b8bb8a0b87bc1bcfef926b01b7f284 588 Pfam PF03717 Penicillin-binding Protein dimerisation domain 70 220 1.3E-21 T 09-03-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 RG43_RS13060 1a7b01cc9105207f1ba4be6a3538cc2b 759 Gene3D G3DSA:3.40.228.10 182 393 1.1E-61 T 09-03-2017 RG43_RS13060 1a7b01cc9105207f1ba4be6a3538cc2b 759 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 12 758 0.0 T 09-03-2017 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 RG43_RS13060 1a7b01cc9105207f1ba4be6a3538cc2b 759 Gene3D G3DSA:2.40.40.20 641 757 3.3E-8 T 09-03-2017 RG43_RS13060 1a7b01cc9105207f1ba4be6a3538cc2b 759 Pfam PF01568 Molydopterin dinucleotide binding domain 642 751 4.9E-6 T 09-03-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RG43_RS13060 1a7b01cc9105207f1ba4be6a3538cc2b 759 Pfam PF00384 Molybdopterin oxidoreductase 108 421 1.5E-28 T 09-03-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS13060 1a7b01cc9105207f1ba4be6a3538cc2b 759 SUPERFAMILY SSF50692 641 758 1.42E-12 T 09-03-2017 IPR009010 Aspartate decarboxylase-like domain RG43_RS13060 1a7b01cc9105207f1ba4be6a3538cc2b 759 Gene3D G3DSA:3.40.50.740 108 181 1.1E-50 T 09-03-2017 RG43_RS13060 1a7b01cc9105207f1ba4be6a3538cc2b 759 Gene3D G3DSA:3.40.50.740 394 625 1.1E-50 T 09-03-2017 RG43_RS13060 1a7b01cc9105207f1ba4be6a3538cc2b 759 SUPERFAMILY SSF53706 46 625 8.9E-147 T 09-03-2017 RG43_RS13060 1a7b01cc9105207f1ba4be6a3538cc2b 759 PIRSF PIRSF000144 1 759 0.0 T 09-03-2017 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 RG43_RS01750 2c49215039eae5a7c880a2c1bee77d6b 233 Gene3D G3DSA:2.60.40.1090 60 211 6.6E-22 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS01750 2c49215039eae5a7c880a2c1bee77d6b 233 SUPERFAMILY SSF49401 61 211 4.62E-18 T 09-03-2017 IPR008966 Adhesion domain RG43_RS01750 2c49215039eae5a7c880a2c1bee77d6b 233 Pfam PF00419 Fimbrial protein 63 211 7.4E-14 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS18350 23739e0d7ba81c082008c3a9a94bcc78 169 Pfam PF00731 AIR carboxylase 9 157 7.5E-64 T 09-03-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 RG43_RS18350 23739e0d7ba81c082008c3a9a94bcc78 169 SMART SM01001 8 159 1.3E-103 T 09-03-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 RG43_RS18350 23739e0d7ba81c082008c3a9a94bcc78 169 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 10 163 32.41 T 09-03-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 RG43_RS18350 23739e0d7ba81c082008c3a9a94bcc78 169 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 10 163 2.2E-66 T 09-03-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 RG43_RS18350 23739e0d7ba81c082008c3a9a94bcc78 169 Gene3D G3DSA:3.40.50.7700 4 163 4.2E-75 T 09-03-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 RG43_RS18350 23739e0d7ba81c082008c3a9a94bcc78 169 SUPERFAMILY SSF52255 7 165 3.4E-67 T 09-03-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 RG43_RS18350 23739e0d7ba81c082008c3a9a94bcc78 169 PIRSF PIRSF001338 5 166 2.0E-67 T 09-03-2017 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 RG43_RS07520 8e01db600798e8679eb42a947c528f99 467 Gene3D G3DSA:3.30.420.40 229 264 4.2E-6 T 09-03-2017 RG43_RS07520 8e01db600798e8679eb42a947c528f99 467 Gene3D G3DSA:3.30.420.40 148 178 4.2E-6 T 09-03-2017 RG43_RS07520 8e01db600798e8679eb42a947c528f99 467 PIRSF PIRSF012293 2 467 2.8E-213 T 09-03-2017 IPR009377 Ethanolamine utilisation EutA RG43_RS07520 8e01db600798e8679eb42a947c528f99 467 Pfam PF06277 Ethanolamine utilisation protein EutA 5 465 7.9E-179 T 09-03-2017 IPR009377 Ethanolamine utilisation EutA RG43_RS07520 8e01db600798e8679eb42a947c528f99 467 SUPERFAMILY SSF53067 8 266 1.02E-8 T 09-03-2017 RG43_RS19250 2932d3b4e9fdac8bc4bfe81ba6c920bd 314 SUPERFAMILY SSF53213 5 185 9.42E-71 T 09-03-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 RG43_RS19250 2932d3b4e9fdac8bc4bfe81ba6c920bd 314 SUPERFAMILY SSF53213 230 310 9.42E-71 T 09-03-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 RG43_RS19250 2932d3b4e9fdac8bc4bfe81ba6c920bd 314 Hamap MF_01653 2,3-dihydroxyphenylpropionate/2,3-dihydroxicinnamic acid 1,2-dioxygenase [mhpB]. 1 313 54.711 T 09-03-2017 IPR023789 2,3-dihydroxyphenylpropionate/2,3-dihydroxicinnamic acid 1,2-dioxygenase GO:0005506|GO:0019439|GO:0047070|GO:0055114 KEGG: 00360+1.13.11.16|MetaCyc: PWY-6690 RG43_RS19250 2932d3b4e9fdac8bc4bfe81ba6c920bd 314 Gene3D G3DSA:3.40.830.10 7 187 4.1E-86 T 09-03-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 RG43_RS19250 2932d3b4e9fdac8bc4bfe81ba6c920bd 314 Gene3D G3DSA:3.40.830.10 232 312 4.1E-86 T 09-03-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 RG43_RS19250 2932d3b4e9fdac8bc4bfe81ba6c920bd 314 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 4 306 3.4E-90 T 09-03-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 RG43_RS17055 5d959fc5dc1ea35ce3c9656228e8e46e 107 Pfam PF11438 36-mer N-terminal peptide of the N protein (N36) 2 36 2.4E-26 T 09-03-2017 IPR020952 Antitermination protein N, arginine-rich motif RG43_RS22640 c75382fff9ecc0ede3bf989eaa3734cf 432 Pfam PF00709 Adenylosuccinate synthetase 5 423 1.0E-176 T 09-03-2017 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 RG43_RS22640 c75382fff9ecc0ede3bf989eaa3734cf 432 Gene3D G3DSA:3.90.170.10 268 426 9.0E-66 T 09-03-2017 RG43_RS22640 c75382fff9ecc0ede3bf989eaa3734cf 432 SMART SM00788 4 425 6.7E-302 T 09-03-2017 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 RG43_RS22640 c75382fff9ecc0ede3bf989eaa3734cf 432 SUPERFAMILY SSF52540 3 431 1.49E-180 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS22640 c75382fff9ecc0ede3bf989eaa3734cf 432 Gene3D G3DSA:1.10.300.10 103 195 1.6E-38 T 09-03-2017 RG43_RS22640 c75382fff9ecc0ede3bf989eaa3734cf 432 Gene3D G3DSA:3.40.440.10 4 94 1.3E-71 T 09-03-2017 RG43_RS22640 c75382fff9ecc0ede3bf989eaa3734cf 432 Gene3D G3DSA:3.40.440.10 196 266 1.3E-71 T 09-03-2017 RG43_RS22640 c75382fff9ecc0ede3bf989eaa3734cf 432 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 09-03-2017 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 RG43_RS22640 c75382fff9ecc0ede3bf989eaa3734cf 432 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 432 218.673 T 09-03-2017 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 RG43_RS22640 c75382fff9ecc0ede3bf989eaa3734cf 432 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 430 2.2E-210 T 09-03-2017 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 RG43_RS22640 c75382fff9ecc0ede3bf989eaa3734cf 432 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 09-03-2017 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 RG43_RS12340 f9ff8061ff7ebce94f840c0574b0bbb5 403 Pfam PF07690 Major Facilitator Superfamily 14 341 9.4E-43 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS12340 f9ff8061ff7ebce94f840c0574b0bbb5 403 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 3 382 3.5E-148 T 09-03-2017 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 RG43_RS12340 f9ff8061ff7ebce94f840c0574b0bbb5 403 Gene3D G3DSA:1.20.1250.20 7 189 4.7E-30 T 09-03-2017 RG43_RS12340 f9ff8061ff7ebce94f840c0574b0bbb5 403 Gene3D G3DSA:1.20.1250.20 200 377 3.5E-14 T 09-03-2017 RG43_RS12340 f9ff8061ff7ebce94f840c0574b0bbb5 403 SUPERFAMILY SSF103473 5 379 4.71E-60 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS18765 7f8cd76f44c85087005cb9c34e1ef77c 566 Gene3D G3DSA:3.90.76.10 133 274 8.2E-21 T 09-03-2017 RG43_RS18765 7f8cd76f44c85087005cb9c34e1ef77c 566 Pfam PF12793 Sugar transport-related sRNA regulator N-term 6 118 3.0E-39 T 09-03-2017 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain RG43_RS18765 7f8cd76f44c85087005cb9c34e1ef77c 566 SUPERFAMILY SSF53850 115 561 2.17E-56 T 09-03-2017 RG43_RS18765 7f8cd76f44c85087005cb9c34e1ef77c 566 Gene3D G3DSA:3.10.105.10 405 533 9.1E-5 T 09-03-2017 RG43_RS18765 7f8cd76f44c85087005cb9c34e1ef77c 566 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 165 303 2.4E-15 T 09-03-2017 IPR000914 Solute-binding protein family 5 domain RG43_RS15930 4deb859ea0c3c687e228a6c7674bceb6 361 Gene3D G3DSA:2.40.160.10 22 361 3.7E-106 T 09-03-2017 IPR023614 Porin domain RG43_RS15930 4deb859ea0c3c687e228a6c7674bceb6 361 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 232 244 4.0E-17 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RG43_RS15930 4deb859ea0c3c687e228a6c7674bceb6 361 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 316 333 4.0E-17 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RG43_RS15930 4deb859ea0c3c687e228a6c7674bceb6 361 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 102 112 4.0E-17 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RG43_RS15930 4deb859ea0c3c687e228a6c7674bceb6 361 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 158 169 4.0E-17 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RG43_RS15930 4deb859ea0c3c687e228a6c7674bceb6 361 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 57 68 4.0E-17 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RG43_RS15930 4deb859ea0c3c687e228a6c7674bceb6 361 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 316 332 - T 09-03-2017 IPR013793 Porin, Gram-negative type, conserved site RG43_RS15930 4deb859ea0c3c687e228a6c7674bceb6 361 PRINTS PR00183 E.coli/Salmonella-type porin signature 238 255 2.0E-67 T 09-03-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 RG43_RS15930 4deb859ea0c3c687e228a6c7674bceb6 361 PRINTS PR00183 E.coli/Salmonella-type porin signature 56 74 2.0E-67 T 09-03-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 RG43_RS15930 4deb859ea0c3c687e228a6c7674bceb6 361 PRINTS PR00183 E.coli/Salmonella-type porin signature 102 124 2.0E-67 T 09-03-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 RG43_RS15930 4deb859ea0c3c687e228a6c7674bceb6 361 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 2.0E-67 T 09-03-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 RG43_RS15930 4deb859ea0c3c687e228a6c7674bceb6 361 PRINTS PR00183 E.coli/Salmonella-type porin signature 156 178 2.0E-67 T 09-03-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 RG43_RS15930 4deb859ea0c3c687e228a6c7674bceb6 361 PRINTS PR00183 E.coli/Salmonella-type porin signature 272 291 2.0E-67 T 09-03-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 RG43_RS15930 4deb859ea0c3c687e228a6c7674bceb6 361 SUPERFAMILY SSF56935 22 361 2.46E-81 T 09-03-2017 RG43_RS15930 4deb859ea0c3c687e228a6c7674bceb6 361 Pfam PF00267 Gram-negative porin 27 361 1.0E-138 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RG43_RS19235 176623507de234b955b5a9e1ebed82af 316 PIRSF PIRSF015689 1 315 1.4E-136 T 09-03-2017 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 RG43_RS19235 176623507de234b955b5a9e1ebed82af 316 Pfam PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation 131 284 2.2E-63 T 09-03-2017 IPR015426 Acetaldehyde dehydrogenase, C-terminal GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 RG43_RS19235 176623507de234b955b5a9e1ebed82af 316 SMART SM00859 5 123 1.7E-15 T 09-03-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RG43_RS19235 176623507de234b955b5a9e1ebed82af 316 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 119 1.3E-13 T 09-03-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RG43_RS19235 176623507de234b955b5a9e1ebed82af 316 SUPERFAMILY SSF51735 1 155 4.49E-29 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS19235 176623507de234b955b5a9e1ebed82af 316 Hamap MF_01657 Acetaldehyde dehydrogenase [mhpF]. 1 316 145.708 T 09-03-2017 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 RG43_RS19235 176623507de234b955b5a9e1ebed82af 316 Gene3D G3DSA:3.30.360.10 144 284 1.0E-74 T 09-03-2017 RG43_RS19235 176623507de234b955b5a9e1ebed82af 316 Gene3D G3DSA:3.40.50.720 1 143 3.7E-75 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS19235 176623507de234b955b5a9e1ebed82af 316 TIGRFAM TIGR03215 ac_ald_DH_ac: acetaldehyde dehydrogenase (acetylating) 3 308 2.4E-142 T 09-03-2017 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 RG43_RS19235 176623507de234b955b5a9e1ebed82af 316 SUPERFAMILY SSF55347 131 284 8.5E-68 T 09-03-2017 RG43_RS21295 8e50c1173b2d8b1b9aae7ef9d73960e6 273 SMART SM00650 25 198 1.3E-84 T 09-03-2017 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 RG43_RS21295 8e50c1173b2d8b1b9aae7ef9d73960e6 273 Gene3D G3DSA:1.10.8.100 201 266 1.5E-25 T 09-03-2017 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201 RG43_RS21295 8e50c1173b2d8b1b9aae7ef9d73960e6 273 SUPERFAMILY SSF53335 17 266 3.2E-76 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS21295 8e50c1173b2d8b1b9aae7ef9d73960e6 273 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 09-03-2017 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 RG43_RS21295 8e50c1173b2d8b1b9aae7ef9d73960e6 273 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 11 264 4.2E-90 T 09-03-2017 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 RG43_RS21295 8e50c1173b2d8b1b9aae7ef9d73960e6 273 Gene3D G3DSA:3.40.50.150 6 198 1.1E-66 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS21295 8e50c1173b2d8b1b9aae7ef9d73960e6 273 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 265 54.865 T 09-03-2017 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 RG43_RS21295 8e50c1173b2d8b1b9aae7ef9d73960e6 273 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 265 5.6E-89 T 09-03-2017 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm RG43_RS02490 ea0c3bd4c95fbf3ce71c7d63789f4663 122 Pfam PF09350 Domain of unknown function (DUF1992) 7 73 3.4E-23 T 09-03-2017 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain RG43_RS10675 182bde268a9f2399df633c218dee2818 207 Hamap MF_00982 Transcriptional regulatory protein RcsA [rcsA]. 1 207 49.238 T 09-03-2017 IPR030866 Transcriptional regulatory protein RcsA GO:0006355 RG43_RS10675 182bde268a9f2399df633c218dee2818 207 SMART SM00421 135 192 5.6E-11 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS10675 182bde268a9f2399df633c218dee2818 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 168 1.2E-7 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS10675 182bde268a9f2399df633c218dee2818 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 180 1.2E-7 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS10675 182bde268a9f2399df633c218dee2818 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 152 1.2E-7 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS10675 182bde268a9f2399df633c218dee2818 207 SUPERFAMILY SSF46894 126 186 8.5E-11 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RG43_RS10675 182bde268a9f2399df633c218dee2818 207 Gene3D G3DSA:1.10.10.10 134 189 8.3E-10 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS10675 182bde268a9f2399df633c218dee2818 207 ProSitePatterns PS00622 LuxR-type HTH domain signature. 152 179 - T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS10675 182bde268a9f2399df633c218dee2818 207 Pfam PF00196 Bacterial regulatory proteins, luxR family 137 191 3.4E-19 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS03455 3fa7e8669f303c3b972b1d59e67a7154 134 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 19 127 1.1E-22 T 09-03-2017 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III RG43_RS09865 fd630ad54cb3c191efa332f02f1ebd06 122 Pfam PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A 19 117 2.5E-51 T 09-03-2017 IPR009320 YagB/YeeU/YfjZ RG43_RS09865 fd630ad54cb3c191efa332f02f1ebd06 122 Gene3D G3DSA:3.30.450.20 27 119 1.2E-58 T 09-03-2017 RG43_RS09865 fd630ad54cb3c191efa332f02f1ebd06 122 SUPERFAMILY SSF143737 8 118 6.54E-55 T 09-03-2017 RG43_RS14720 9d5029004b702bc54723daa4db8308a8 270 SUPERFAMILY SSF52540 1 268 2.75E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS14720 9d5029004b702bc54723daa4db8308a8 270 PIRSF PIRSF003092 1 270 3.6E-100 T 09-03-2017 IPR025501 ATP binding protein MinD RG43_RS14720 9d5029004b702bc54723daa4db8308a8 270 Gene3D G3DSA:3.40.50.300 1 248 1.5E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS14720 9d5029004b702bc54723daa4db8308a8 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 1.3E-110 T 09-03-2017 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 RG43_RS14720 9d5029004b702bc54723daa4db8308a8 270 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 217 3.1E-28 T 09-03-2017 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RG43_RS12810 a4dfab7f4e7a90318b2f292efa00baff 228 Gene3D G3DSA:1.20.120.530 79 221 1.6E-25 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal RG43_RS12810 a4dfab7f4e7a90318b2f292efa00baff 228 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 8.0E-5 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS12810 a4dfab7f4e7a90318b2f292efa00baff 228 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 8.0E-5 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS12810 a4dfab7f4e7a90318b2f292efa00baff 228 SUPERFAMILY SSF48008 87 216 6.54E-26 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal RG43_RS12810 a4dfab7f4e7a90318b2f292efa00baff 228 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 75 2.9E-17 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS12810 a4dfab7f4e7a90318b2f292efa00baff 228 SMART SM00895 85 209 5.5E-17 T 09-03-2017 IPR011711 GntR, C-terminal RG43_RS12810 a4dfab7f4e7a90318b2f292efa00baff 228 Gene3D G3DSA:1.10.10.10 4 76 5.8E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS12810 a4dfab7f4e7a90318b2f292efa00baff 228 SMART SM00345 17 75 2.6E-22 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS12810 a4dfab7f4e7a90318b2f292efa00baff 228 SUPERFAMILY SSF46785 7 104 7.69E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS12810 a4dfab7f4e7a90318b2f292efa00baff 228 Pfam PF07729 FCD domain 89 208 2.2E-25 T 09-03-2017 IPR011711 GntR, C-terminal RG43_RS05645 e99daa20c37f853ba04e9236929918a5 198 SUPERFAMILY SSF53697 7 195 1.96E-44 T 09-03-2017 RG43_RS05645 e99daa20c37f853ba04e9236929918a5 198 Gene3D G3DSA:3.40.50.10490 15 190 1.1E-40 T 09-03-2017 RG43_RS05645 e99daa20c37f853ba04e9236929918a5 198 Pfam PF01380 SIS domain 42 170 2.3E-25 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 RG43_RS20595 e410512694c5bfde8a02684be2b1b62a 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 4.0E-113 T 09-03-2017 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 RG43_RS20595 e410512694c5bfde8a02684be2b1b62a 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 20 48 - T 09-03-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 RG43_RS20595 e410512694c5bfde8a02684be2b1b62a 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 45 3.7E-8 T 09-03-2017 IPR001451 Hexapeptide repeat RG43_RS20595 e410512694c5bfde8a02684be2b1b62a 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 5.0E-9 T 09-03-2017 IPR001451 Hexapeptide repeat RG43_RS20595 e410512694c5bfde8a02684be2b1b62a 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 3.5E-29 T 09-03-2017 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 RG43_RS20595 e410512694c5bfde8a02684be2b1b62a 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 49.046 T 09-03-2017 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 RG43_RS20595 e410512694c5bfde8a02684be2b1b62a 262 SUPERFAMILY SSF51161 2 262 7.54E-81 T 09-03-2017 IPR011004 Trimeric LpxA-like RG43_RS20595 e410512694c5bfde8a02684be2b1b62a 262 PIRSF PIRSF000456 5 262 1.5E-107 T 09-03-2017 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 RG43_RS20595 e410512694c5bfde8a02684be2b1b62a 262 Gene3D G3DSA:2.160.10.10 4 194 5.4E-51 T 09-03-2017 RG43_RS20595 e410512694c5bfde8a02684be2b1b62a 262 Gene3D G3DSA:1.20.1180.10 197 262 6.1E-28 T 09-03-2017 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 RG43_RS20595 e410512694c5bfde8a02684be2b1b62a 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 153 181 - T 09-03-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 RG43_RS17970 e53ab744988e1e2f5a5d90cc7f10a9ef 186 SUPERFAMILY SSF56925 26 186 4.87E-83 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RG43_RS17970 e53ab744988e1e2f5a5d90cc7f10a9ef 186 Gene3D G3DSA:2.40.160.20 26 186 1.0E-89 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RG43_RS17970 e53ab744988e1e2f5a5d90cc7f10a9ef 186 ProDom PD103779 CRCA ANTIMICROBIAL RESISTANCE LIPOPROTEIN RCP A PEPTIDE ACYLATION LIPID EXPORTED 33 174 7.0E-81 T 09-03-2017 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 RG43_RS17970 e53ab744988e1e2f5a5d90cc7f10a9ef 186 Hamap MF_00837 Lipid A palmitoyltransferase PagP [pagP]. 3 186 43.484 T 09-03-2017 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 RG43_RS17970 e53ab744988e1e2f5a5d90cc7f10a9ef 186 Pfam PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP 37 183 7.4E-67 T 09-03-2017 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 RG43_RS24505 175e0304e562d58c9c1566d1b677fa2d 274 Gene3D G3DSA:3.40.225.10 1 271 5.4E-109 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal RG43_RS24505 175e0304e562d58c9c1566d1b677fa2d 274 SMART SM01007 11 239 4.6E-31 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal RG43_RS24505 175e0304e562d58c9c1566d1b677fa2d 274 TIGRFAM TIGR02624 rhamnu_1P_ald: rhamnulose-1-phosphate aldolase 1 272 1.9E-140 T 09-03-2017 IPR013447 Rhamnulose-1-phosphate aldolase GO:0008994|GO:0019301 KEGG: 00040+4.1.2.19|KEGG: 00051+4.1.2.19 RG43_RS24505 175e0304e562d58c9c1566d1b677fa2d 274 Hamap MF_00770 Rhamnulose-1-phosphate aldolase [rhaD]. 1 272 57.945 T 09-03-2017 IPR013447 Rhamnulose-1-phosphate aldolase GO:0008994|GO:0019301 KEGG: 00040+4.1.2.19|KEGG: 00051+4.1.2.19 RG43_RS24505 175e0304e562d58c9c1566d1b677fa2d 274 SUPERFAMILY SSF53639 1 271 2.35E-77 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal RG43_RS24505 175e0304e562d58c9c1566d1b677fa2d 274 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 12 238 2.1E-34 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal RG43_RS13535 49c48ea58b8b69ec2117508a0b3b0615 1300 SMART SM00487 75 259 5.0E-27 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain RG43_RS13535 49c48ea58b8b69ec2117508a0b3b0615 1300 SMART SM00490 304 404 1.0E-15 T 09-03-2017 IPR001650 Helicase, C-terminal RG43_RS13535 49c48ea58b8b69ec2117508a0b3b0615 1300 Pfam PF00270 DEAD/DEAH box helicase 85 233 6.9E-6 T 09-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RG43_RS13535 49c48ea58b8b69ec2117508a0b3b0615 1300 Gene3D G3DSA:3.40.50.300 493 612 1.6E-4 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS13535 49c48ea58b8b69ec2117508a0b3b0615 1300 SUPERFAMILY SSF52540 74 601 5.28E-111 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS13535 49c48ea58b8b69ec2117508a0b3b0615 1300 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 13 1297 0.0 T 09-03-2017 IPR010222 RNA helicase HrpA GO:0004004 RG43_RS13535 49c48ea58b8b69ec2117508a0b3b0615 1300 Pfam PF04408 Helicase associated domain (HA2) 466 557 4.5E-17 T 09-03-2017 IPR007502 Helicase-associated domain GO:0004386 RG43_RS13535 49c48ea58b8b69ec2117508a0b3b0615 1300 Gene3D G3DSA:3.40.50.300 77 233 3.8E-47 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS13535 49c48ea58b8b69ec2117508a0b3b0615 1300 SMART SM00847 464 559 1.1E-37 T 09-03-2017 IPR007502 Helicase-associated domain GO:0004386 RG43_RS13535 49c48ea58b8b69ec2117508a0b3b0615 1300 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 599 698 1.2E-16 T 09-03-2017 IPR011709 Domain of unknown function DUF1605 RG43_RS13535 49c48ea58b8b69ec2117508a0b3b0615 1300 Pfam PF11898 Domain of unknown function (DUF3418) 713 1297 1.4E-237 T 09-03-2017 IPR024590 RNA helicase HrpA, C-terminal RG43_RS13535 49c48ea58b8b69ec2117508a0b3b0615 1300 Pfam PF00271 Helicase conserved C-terminal domain 284 403 6.0E-11 T 09-03-2017 IPR001650 Helicase, C-terminal RG43_RS13535 49c48ea58b8b69ec2117508a0b3b0615 1300 Gene3D G3DSA:3.40.50.300 271 416 7.8E-13 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS13535 49c48ea58b8b69ec2117508a0b3b0615 1300 SMART SM00382 92 384 5.7E-5 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS21725 8c23dcd724defdfc273aaee51bbabc62 148 Pfam PF00583 Acetyltransferase (GNAT) family 47 120 7.0E-19 T 09-03-2017 IPR000182 GNAT domain GO:0008080 RG43_RS21725 8c23dcd724defdfc273aaee51bbabc62 148 Gene3D G3DSA:3.40.630.30 3 147 1.6E-36 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS21725 8c23dcd724defdfc273aaee51bbabc62 148 SUPERFAMILY SSF55729 3 146 3.49E-34 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS21725 8c23dcd724defdfc273aaee51bbabc62 148 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 11 142 4.3E-48 T 09-03-2017 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 RG43_RS04435 9f54439eb5673af37382fc6a7a5c7905 407 Pfam PF00482 Type II secretion system (T2SS), protein F 72 195 1.0E-31 T 09-03-2017 IPR018076 Type II secretion system F domain RG43_RS04435 9f54439eb5673af37382fc6a7a5c7905 407 Pfam PF00482 Type II secretion system (T2SS), protein F 275 395 1.0E-23 T 09-03-2017 IPR018076 Type II secretion system F domain RG43_RS04435 9f54439eb5673af37382fc6a7a5c7905 407 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 405 7.1E-148 T 09-03-2017 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 RG43_RS04435 9f54439eb5673af37382fc6a7a5c7905 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 167 195 1.0E-40 T 09-03-2017 IPR003004 GspF/PilC family RG43_RS04435 9f54439eb5673af37382fc6a7a5c7905 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 370 384 1.0E-40 T 09-03-2017 IPR003004 GspF/PilC family RG43_RS04435 9f54439eb5673af37382fc6a7a5c7905 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 386 405 1.0E-40 T 09-03-2017 IPR003004 GspF/PilC family RG43_RS04435 9f54439eb5673af37382fc6a7a5c7905 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 68 80 1.0E-40 T 09-03-2017 IPR003004 GspF/PilC family RG43_RS04435 9f54439eb5673af37382fc6a7a5c7905 407 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 167 195 - T 09-03-2017 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 RG43_RS26810 9f54439eb5673af37382fc6a7a5c7905 407 Pfam PF00482 Type II secretion system (T2SS), protein F 72 195 1.0E-31 T 09-03-2017 IPR018076 Type II secretion system F domain RG43_RS26810 9f54439eb5673af37382fc6a7a5c7905 407 Pfam PF00482 Type II secretion system (T2SS), protein F 275 395 1.0E-23 T 09-03-2017 IPR018076 Type II secretion system F domain RG43_RS26810 9f54439eb5673af37382fc6a7a5c7905 407 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 405 7.1E-148 T 09-03-2017 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 RG43_RS26810 9f54439eb5673af37382fc6a7a5c7905 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 167 195 1.0E-40 T 09-03-2017 IPR003004 GspF/PilC family RG43_RS26810 9f54439eb5673af37382fc6a7a5c7905 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 370 384 1.0E-40 T 09-03-2017 IPR003004 GspF/PilC family RG43_RS26810 9f54439eb5673af37382fc6a7a5c7905 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 386 405 1.0E-40 T 09-03-2017 IPR003004 GspF/PilC family RG43_RS26810 9f54439eb5673af37382fc6a7a5c7905 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 68 80 1.0E-40 T 09-03-2017 IPR003004 GspF/PilC family RG43_RS26810 9f54439eb5673af37382fc6a7a5c7905 407 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 167 195 - T 09-03-2017 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 RG43_RS05810 cf263bc6440a4d61df51f2a700d06fc6 366 Gene3D G3DSA:3.40.50.150 184 316 5.2E-15 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS05810 cf263bc6440a4d61df51f2a700d06fc6 366 SUPERFAMILY SSF53335 184 296 3.09E-13 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS05810 cf263bc6440a4d61df51f2a700d06fc6 366 PIRSF PIRSF028774 1 360 8.6E-193 T 09-03-2017 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 RG43_RS05810 cf263bc6440a4d61df51f2a700d06fc6 366 Pfam PF01728 FtsJ-like methyltransferase 186 279 3.2E-8 T 09-03-2017 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 RG43_RS05810 cf263bc6440a4d61df51f2a700d06fc6 366 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 355 87.539 T 09-03-2017 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 RG43_RS12000 5c9e9fcaf450e96d87a02972c30b517c 286 Pfam PF03881 Fructosamine kinase 1 285 4.2E-114 T 09-03-2017 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 RG43_RS12000 5c9e9fcaf450e96d87a02972c30b517c 286 Gene3D G3DSA:3.90.1200.10 96 259 3.5E-13 T 09-03-2017 RG43_RS12000 5c9e9fcaf450e96d87a02972c30b517c 286 SUPERFAMILY SSF56112 4 280 2.89E-41 T 09-03-2017 IPR011009 Protein kinase-like domain RG43_RS12000 5c9e9fcaf450e96d87a02972c30b517c 286 Gene3D G3DSA:3.30.200.20 32 90 8.5E-5 T 09-03-2017 RG43_RS12000 5c9e9fcaf450e96d87a02972c30b517c 286 PIRSF PIRSF006221 1 286 2.4E-95 T 09-03-2017 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 RG43_RS03415 87659aeb1a09c9985ff0d0515b89479c 233 SUPERFAMILY SSF51182 1 231 1.39E-45 T 09-03-2017 IPR011051 RmlC-like cupin domain RG43_RS03415 87659aeb1a09c9985ff0d0515b89479c 233 Pfam PF02678 Pirin 4 119 3.0E-23 T 09-03-2017 IPR003829 Pirin, N-terminal domain RG43_RS03415 87659aeb1a09c9985ff0d0515b89479c 233 PIRSF PIRSF006232 1 230 4.7E-33 T 09-03-2017 IPR012093 Pirin RG43_RS03415 87659aeb1a09c9985ff0d0515b89479c 233 Gene3D G3DSA:2.60.120.10 3 231 6.9E-32 T 09-03-2017 IPR014710 RmlC-like jelly roll fold RG43_RS05660 834e5fbd50d921dbd8c5462acc4267a5 142 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 3 113 1.9E-25 T 09-03-2017 IPR017737 Type VI secretion system, lysozyme-related protein RG43_RS05660 834e5fbd50d921dbd8c5462acc4267a5 142 SUPERFAMILY SSF160719 29 117 2.48E-19 T 09-03-2017 RG43_RS05660 834e5fbd50d921dbd8c5462acc4267a5 142 Gene3D G3DSA:3.10.450.40 32 116 1.1E-11 T 09-03-2017 RG43_RS05660 834e5fbd50d921dbd8c5462acc4267a5 142 Pfam PF04965 Gene 25-like lysozyme 30 112 6.4E-12 T 09-03-2017 IPR007048 GpW/Gp25/anti-adapter protein IraD RG43_RS24675 44143f34bdd1a9c10372a791489b2f91 469 SUPERFAMILY SSF52540 139 382 9.46E-75 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS24675 44143f34bdd1a9c10372a791489b2f91 469 Gene3D G3DSA:3.40.50.2300 6 132 1.2E-39 T 09-03-2017 RG43_RS24675 44143f34bdd1a9c10372a791489b2f91 469 Pfam PF00158 Sigma-54 interaction domain 140 306 1.4E-70 T 09-03-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RG43_RS24675 44143f34bdd1a9c10372a791489b2f91 469 SMART SM00448 4 115 1.1E-38 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS24675 44143f34bdd1a9c10372a791489b2f91 469 Gene3D G3DSA:3.40.50.300 138 312 2.7E-62 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS24675 44143f34bdd1a9c10372a791489b2f91 469 SUPERFAMILY SSF46689 380 469 3.94E-24 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS24675 44143f34bdd1a9c10372a791489b2f91 469 SUPERFAMILY SSF52172 6 185 7.26E-49 T 09-03-2017 IPR011006 CheY-like superfamily RG43_RS24675 44143f34bdd1a9c10372a791489b2f91 469 Gene3D G3DSA:1.10.8.60 313 391 2.0E-24 T 09-03-2017 RG43_RS24675 44143f34bdd1a9c10372a791489b2f91 469 SMART SM00382 160 311 5.6E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS24675 44143f34bdd1a9c10372a791489b2f91 469 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 466 2.2E-249 T 09-03-2017 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 RG43_RS24675 44143f34bdd1a9c10372a791489b2f91 469 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 353 362 - T 09-03-2017 IPR025944 Sigma-54 interaction domain, conserved site RG43_RS24675 44143f34bdd1a9c10372a791489b2f91 469 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 449 8.0E-11 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RG43_RS24675 44143f34bdd1a9c10372a791489b2f91 469 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 469 8.0E-11 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RG43_RS24675 44143f34bdd1a9c10372a791489b2f91 469 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 164 177 - T 09-03-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RG43_RS24675 44143f34bdd1a9c10372a791489b2f91 469 Pfam PF00072 Response regulator receiver domain 6 115 5.9E-31 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS24675 44143f34bdd1a9c10372a791489b2f91 469 Pfam PF02954 Bacterial regulatory protein, Fis family 427 466 1.9E-15 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RG43_RS24675 44143f34bdd1a9c10372a791489b2f91 469 Gene3D G3DSA:1.10.10.60 399 469 4.4E-24 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS24675 44143f34bdd1a9c10372a791489b2f91 469 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 226 241 - T 09-03-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RG43_RS09885 0480074a3b62eb053a1cf6ec954b220e 272 Pfam PF06067 Domain of unknown function (DUF932) 37 261 1.4E-54 T 09-03-2017 IPR026325 Protein of unknown function DUF932 RG43_RS09380 702c6f1aed8f0a0c103508cd8ac66215 451 PIRSF PIRSF006304 2 451 4.5E-170 T 09-03-2017 IPR013853 Galactitol permease IIC component GO:0015577|GO:0015796 RG43_RS09380 702c6f1aed8f0a0c103508cd8ac66215 451 Pfam PF03611 PTS system sugar-specific permease component 8 385 1.1E-78 T 09-03-2017 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 RG43_RS09380 702c6f1aed8f0a0c103508cd8ac66215 451 TIGRFAM TIGR00827 EIIC-GAT: PTS system, galactitol-specific IIC component 9 413 9.1E-215 T 09-03-2017 IPR013853 Galactitol permease IIC component GO:0015577|GO:0015796 RG43_RS13495 1352a56223e46fb36e5ff06407933c9e 307 Gene3D G3DSA:1.10.10.10 10 91 3.9E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS13495 1352a56223e46fb36e5ff06407933c9e 307 SUPERFAMILY SSF46785 10 121 7.35E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS13495 1352a56223e46fb36e5ff06407933c9e 307 Pfam PF03466 LysR substrate binding domain 101 304 7.3E-33 T 09-03-2017 IPR005119 LysR, substrate-binding RG43_RS13495 1352a56223e46fb36e5ff06407933c9e 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 1.4E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS13495 1352a56223e46fb36e5ff06407933c9e 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 1.4E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS13495 1352a56223e46fb36e5ff06407933c9e 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 1.4E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS13495 1352a56223e46fb36e5ff06407933c9e 307 Gene3D G3DSA:3.40.190.10 186 272 5.3E-10 T 09-03-2017 RG43_RS13495 1352a56223e46fb36e5ff06407933c9e 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 72 4.1E-19 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS13495 1352a56223e46fb36e5ff06407933c9e 307 SUPERFAMILY SSF53850 102 305 4.75E-31 T 09-03-2017 RG43_RS13495 1352a56223e46fb36e5ff06407933c9e 307 Gene3D G3DSA:3.40.190.10 103 185 3.8E-18 T 09-03-2017 RG43_RS05060 3ba845c9be72bc9c13e72f5f445d2750 306 ProSitePatterns PS01053 Arginase family signature. 228 249 - T 09-03-2017 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 RG43_RS05060 3ba845c9be72bc9c13e72f5f445d2750 306 SUPERFAMILY SSF52768 13 301 2.88E-91 T 09-03-2017 RG43_RS05060 3ba845c9be72bc9c13e72f5f445d2750 306 Pfam PF00491 Arginase family 34 297 7.7E-86 T 09-03-2017 IPR006035 Ureohydrolase GO:0046872 RG43_RS05060 3ba845c9be72bc9c13e72f5f445d2750 306 PIRSF PIRSF036979 12 304 1.1E-101 T 09-03-2017 IPR006035 Ureohydrolase GO:0046872 RG43_RS05060 3ba845c9be72bc9c13e72f5f445d2750 306 Gene3D G3DSA:3.40.800.10 11 302 3.5E-97 T 09-03-2017 IPR023696 Ureohydrolase domain RG43_RS05060 3ba845c9be72bc9c13e72f5f445d2750 306 TIGRFAM TIGR01230 agmatinase: agmatinase 22 299 3.9E-119 T 09-03-2017 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 RG43_RS05060 3ba845c9be72bc9c13e72f5f445d2750 306 Hamap MF_01418 Agmatinase [speB]. 1 304 70.587 T 09-03-2017 IPR023694 Agmatinase GO:0008783|GO:0009446|GO:0030145 KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305 RG43_RS03210 c8305418f36e9d1481288ce5403c7a73 172 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 4 171 8.8E-70 T 09-03-2017 IPR006286 Peptidase C56, PfpI RG43_RS03210 c8305418f36e9d1481288ce5403c7a73 172 SUPERFAMILY SSF52317 3 170 1.95E-46 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like RG43_RS03210 c8305418f36e9d1481288ce5403c7a73 172 Gene3D G3DSA:3.40.50.880 1 170 3.8E-52 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like RG43_RS03210 c8305418f36e9d1481288ce5403c7a73 172 Pfam PF01965 DJ-1/PfpI family 3 167 1.6E-55 T 09-03-2017 IPR002818 DJ-1/PfpI RG43_RS16500 fb5e21c175bb1218cf7baa37ed000f7c 220 ProSitePatterns PS00958 Transaldolase active site. 82 99 - T 09-03-2017 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 RG43_RS16500 fb5e21c175bb1218cf7baa37ed000f7c 220 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 214 3.0E-85 T 09-03-2017 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RG43_RS16500 fb5e21c175bb1218cf7baa37ed000f7c 220 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 09-03-2017 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 RG43_RS16500 fb5e21c175bb1218cf7baa37ed000f7c 220 Hamap MF_00496 Fructose-6-phosphate aldolase [fsa]. 1 220 51.174 T 09-03-2017 IPR023001 Fructose-6-phosphate aldolase GO:0016832 RG43_RS16500 fb5e21c175bb1218cf7baa37ed000f7c 220 SUPERFAMILY SSF51569 1 216 1.55E-62 T 09-03-2017 RG43_RS16500 fb5e21c175bb1218cf7baa37ed000f7c 220 Gene3D G3DSA:3.20.20.70 1 213 7.3E-61 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS16500 fb5e21c175bb1218cf7baa37ed000f7c 220 Pfam PF00923 Transaldolase 3 205 1.9E-44 T 09-03-2017 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 RG43_RS19770 c4dc485bbfe6b26f2ce739e74b8f6a67 199 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 187 198 2.9E-28 T 09-03-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 RG43_RS19770 c4dc485bbfe6b26f2ce739e74b8f6a67 199 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 96 119 2.9E-28 T 09-03-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 RG43_RS19770 c4dc485bbfe6b26f2ce739e74b8f6a67 199 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 160 181 2.9E-28 T 09-03-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 RG43_RS19770 c4dc485bbfe6b26f2ce739e74b8f6a67 199 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 49 61 2.9E-28 T 09-03-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 RG43_RS19770 c4dc485bbfe6b26f2ce739e74b8f6a67 199 ProSitePatterns PS00694 Enterobacterial virulence outer membrane protein signature 1. 50 58 - T 09-03-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 RG43_RS19770 c4dc485bbfe6b26f2ce739e74b8f6a67 199 SUPERFAMILY SSF56925 30 199 2.62E-28 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RG43_RS19770 c4dc485bbfe6b26f2ce739e74b8f6a67 199 Gene3D G3DSA:2.40.160.20 28 199 3.3E-48 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RG43_RS19770 c4dc485bbfe6b26f2ce739e74b8f6a67 199 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 191 199 - T 09-03-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 RG43_RS19770 c4dc485bbfe6b26f2ce739e74b8f6a67 199 Pfam PF06316 Enterobacterial Ail/Lom protein 1 199 7.1E-123 T 09-03-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 RG43_RS11785 bfd766861ddd7e9dfb7827490929583e 618 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 335 541 7.8E-53 T 09-03-2017 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 RG43_RS11785 bfd766861ddd7e9dfb7827490929583e 618 PIRSF PIRSF001217 8 618 3.0E-232 T 09-03-2017 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 RG43_RS11785 bfd766861ddd7e9dfb7827490929583e 618 Gene3D G3DSA:3.90.226.10 220 316 1.3E-70 T 09-03-2017 IPR029045 ClpP/crotonase-like domain RG43_RS11785 bfd766861ddd7e9dfb7827490929583e 618 Gene3D G3DSA:3.90.226.10 469 559 2.3E-69 T 09-03-2017 IPR029045 ClpP/crotonase-like domain RG43_RS11785 bfd766861ddd7e9dfb7827490929583e 618 Gene3D G3DSA:3.90.226.10 30 177 1.3E-70 T 09-03-2017 IPR029045 ClpP/crotonase-like domain RG43_RS11785 bfd766861ddd7e9dfb7827490929583e 618 Gene3D G3DSA:3.90.226.10 323 432 2.3E-69 T 09-03-2017 IPR029045 ClpP/crotonase-like domain RG43_RS11785 bfd766861ddd7e9dfb7827490929583e 618 Pfam PF01343 Peptidase family S49 392 543 3.1E-54 T 09-03-2017 IPR002142 Peptidase S49 GO:0006508|GO:0008233 RG43_RS11785 bfd766861ddd7e9dfb7827490929583e 618 Pfam PF01343 Peptidase family S49 141 295 2.7E-47 T 09-03-2017 IPR002142 Peptidase S49 GO:0006508|GO:0008233 RG43_RS11785 bfd766861ddd7e9dfb7827490929583e 618 SUPERFAMILY SSF52096 321 440 7.69E-43 T 09-03-2017 IPR029045 ClpP/crotonase-like domain RG43_RS11785 bfd766861ddd7e9dfb7827490929583e 618 SUPERFAMILY SSF52096 468 530 7.69E-43 T 09-03-2017 IPR029045 ClpP/crotonase-like domain RG43_RS11785 bfd766861ddd7e9dfb7827490929583e 618 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 609 3.1E-286 T 09-03-2017 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 RG43_RS11785 bfd766861ddd7e9dfb7827490929583e 618 SUPERFAMILY SSF52096 30 181 1.99E-31 T 09-03-2017 IPR029045 ClpP/crotonase-like domain RG43_RS11785 bfd766861ddd7e9dfb7827490929583e 618 SUPERFAMILY SSF52096 212 287 1.99E-31 T 09-03-2017 IPR029045 ClpP/crotonase-like domain RG43_RS21950 ea74da635c6d6a963fd8b520c2ce4012 255 SUPERFAMILY SSF53067 3 246 1.94E-32 T 09-03-2017 RG43_RS21950 ea74da635c6d6a963fd8b520c2ce4012 255 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 5 247 4.7E-68 T 09-03-2017 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 RG43_RS21950 ea74da635c6d6a963fd8b520c2ce4012 255 Gene3D G3DSA:3.30.420.40 92 230 4.7E-46 T 09-03-2017 RG43_RS21950 ea74da635c6d6a963fd8b520c2ce4012 255 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 3 247 2.0E-109 T 09-03-2017 IPR008275 CoA enzyme activase RG43_RS10970 5eb631449474249fef59c1cc7c1a1b9f 329 SUPERFAMILY SSF53822 26 325 5.3E-71 T 09-03-2017 IPR028082 Periplasmic binding protein-like I RG43_RS10970 5eb631449474249fef59c1cc7c1a1b9f 329 Gene3D G3DSA:3.40.50.2300 25 147 1.4E-44 T 09-03-2017 RG43_RS10970 5eb631449474249fef59c1cc7c1a1b9f 329 PIRSF PIRSF002816 3 326 4.8E-151 T 09-03-2017 IPR026266 L-arabinose-binding periplasmic protein GO:0042882 RG43_RS10970 5eb631449474249fef59c1cc7c1a1b9f 329 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 26 319 2.4E-96 T 09-03-2017 IPR001761 Periplasmic binding protein/LacI sugar binding domain RG43_RS10970 5eb631449474249fef59c1cc7c1a1b9f 329 Gene3D G3DSA:3.40.50.2300 148 296 7.8E-56 T 09-03-2017 RG43_RS15940 d7c84ddf4aadf36fcf278f3657c81b94 396 Pfam PF00155 Aminotransferase class I and II 28 392 4.1E-96 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RG43_RS15940 d7c84ddf4aadf36fcf278f3657c81b94 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 09-03-2017 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 RG43_RS15940 d7c84ddf4aadf36fcf278f3657c81b94 396 SUPERFAMILY SSF53383 1 396 3.66E-118 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS15940 d7c84ddf4aadf36fcf278f3657c81b94 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 7.3E-40 T 09-03-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RG43_RS15940 d7c84ddf4aadf36fcf278f3657c81b94 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 7.3E-40 T 09-03-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RG43_RS15940 d7c84ddf4aadf36fcf278f3657c81b94 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 7.3E-40 T 09-03-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RG43_RS15940 d7c84ddf4aadf36fcf278f3657c81b94 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 7.3E-40 T 09-03-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RG43_RS15940 d7c84ddf4aadf36fcf278f3657c81b94 396 Gene3D G3DSA:3.40.640.10 45 315 3.6E-108 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS12755 244ec3fb15d6d07ad62f03f67b5e8b80 101 Pfam PF06649 Protein of unknown function (DUF1161) 26 79 3.2E-22 T 09-03-2017 IPR010595 Protein of unknown function DUF1161 RG43_RS12755 244ec3fb15d6d07ad62f03f67b5e8b80 101 ProDom PD336997 PRECURSOR SIGNAL MEMBRANE OUTER YNFD ESCHERICHIA EXPORTED PP0087 COLI PP0090 1 79 6.0E-31 T 09-03-2017 IPR010595 Protein of unknown function DUF1161 RG43_RS25065 0502d96ea5fa6ff0d12c076b79161401 235 Pfam PF04340 Protein of unknown function, DUF484 11 232 5.8E-89 T 09-03-2017 IPR007435 Protein of unknown function DUF484 RG43_RS21905 ee8993a32a2d87a1d5038d80e0d9c9f4 1087 SMART SM00487 289 505 5.2E-9 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain RG43_RS21905 ee8993a32a2d87a1d5038d80e0d9c9f4 1087 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 5 236 5.1E-50 T 09-03-2017 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 RG43_RS21905 ee8993a32a2d87a1d5038d80e0d9c9f4 1087 Gene3D G3DSA:3.40.50.300 560 615 1.5E-5 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS21905 ee8993a32a2d87a1d5038d80e0d9c9f4 1087 Gene3D G3DSA:3.40.50.300 651 727 1.5E-5 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS21905 ee8993a32a2d87a1d5038d80e0d9c9f4 1087 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 142 745 1.9E-135 T 09-03-2017 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 RG43_RS21905 ee8993a32a2d87a1d5038d80e0d9c9f4 1087 Pfam PF04851 Type III restriction enzyme, res subunit 294 478 4.1E-13 T 09-03-2017 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 RG43_RS21905 ee8993a32a2d87a1d5038d80e0d9c9f4 1087 SUPERFAMILY SSF52540 248 524 5.43E-22 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS21905 ee8993a32a2d87a1d5038d80e0d9c9f4 1087 SUPERFAMILY SSF52540 318 373 7.85E-9 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS21905 ee8993a32a2d87a1d5038d80e0d9c9f4 1087 SUPERFAMILY SSF52540 648 739 7.85E-9 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS21905 ee8993a32a2d87a1d5038d80e0d9c9f4 1087 Pfam PF11867 Domain of unknown function (DUF3387) 749 1080 8.0E-94 T 09-03-2017 IPR021810 Protein of unknown function DUF3387 RG43_RS21905 ee8993a32a2d87a1d5038d80e0d9c9f4 1087 Gene3D G3DSA:3.40.50.300 284 481 1.1E-11 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS22040 94541318ff07bb2471ecb9209bd9e31a 167 SUPERFAMILY SSF49401 27 166 8.45E-25 T 09-03-2017 IPR008966 Adhesion domain RG43_RS22040 94541318ff07bb2471ecb9209bd9e31a 167 Gene3D G3DSA:2.60.40.1090 27 166 3.3E-24 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS06065 78339e6795b36b63b067dd4cb213c3ad 248 TIGRFAM TIGR01868 casD_Cas5e: CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI 3 233 2.6E-47 T 09-03-2017 IPR010147 CRISPR-associated protein, CasD GO:0003723|GO:0051607 RG43_RS06065 78339e6795b36b63b067dd4cb213c3ad 248 Pfam PF09704 CRISPR-associated protein (Cas_Cas5) 4 232 3.0E-33 T 09-03-2017 IPR021124 CRISPR-associated protein, Cas5 GO:0043571 RG43_RS06065 78339e6795b36b63b067dd4cb213c3ad 248 TIGRFAM TIGR02593 CRISPR_cas5: CRISPR-associated protein Cas5 4 46 3.4E-12 T 09-03-2017 IPR013422 CRISPR-associated protein Cas5, N-terminal RG43_RS16600 235c90fa10047625d6d1f6b499a59403 240 SUPERFAMILY SSF52540 1 235 2.1E-80 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16600 235c90fa10047625d6d1f6b499a59403 240 PIRSF PIRSF039085 1 240 2.3E-109 T 09-03-2017 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 RG43_RS16600 235c90fa10047625d6d1f6b499a59403 240 SMART SM00382 26 213 1.7E-16 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS16600 235c90fa10047625d6d1f6b499a59403 240 Pfam PF00005 ABC transporter 17 165 1.0E-36 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS16600 235c90fa10047625d6d1f6b499a59403 240 Gene3D G3DSA:3.40.50.300 1 237 4.7E-85 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16600 235c90fa10047625d6d1f6b499a59403 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS13045 544c6be5df02a4efb6d41182aadbaa32 176 SUPERFAMILY SSF49401 33 176 1.44E-33 T 09-03-2017 IPR008966 Adhesion domain RG43_RS13045 544c6be5df02a4efb6d41182aadbaa32 176 Gene3D G3DSA:2.60.40.1090 27 176 2.0E-39 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS13045 544c6be5df02a4efb6d41182aadbaa32 176 Pfam PF00419 Fimbrial protein 29 176 9.4E-19 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS25360 45309887d9ab5959943b9cff8ac0bdc7 475 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 18 433 2.6E-79 T 09-03-2017 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 RG43_RS25360 45309887d9ab5959943b9cff8ac0bdc7 475 Gene3D G3DSA:1.20.1250.20 261 459 2.0E-15 T 09-03-2017 RG43_RS25360 45309887d9ab5959943b9cff8ac0bdc7 475 Gene3D G3DSA:1.20.1250.20 14 183 1.8E-25 T 09-03-2017 RG43_RS25360 45309887d9ab5959943b9cff8ac0bdc7 475 Pfam PF07690 Major Facilitator Superfamily 17 406 4.4E-46 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS25360 45309887d9ab5959943b9cff8ac0bdc7 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 136 160 2.2E-9 T 09-03-2017 RG43_RS25360 45309887d9ab5959943b9cff8ac0bdc7 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 106 126 2.2E-9 T 09-03-2017 RG43_RS25360 45309887d9ab5959943b9cff8ac0bdc7 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 397 416 2.2E-9 T 09-03-2017 RG43_RS25360 45309887d9ab5959943b9cff8ac0bdc7 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 15 39 2.2E-9 T 09-03-2017 RG43_RS25360 45309887d9ab5959943b9cff8ac0bdc7 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 200 218 2.2E-9 T 09-03-2017 RG43_RS25360 45309887d9ab5959943b9cff8ac0bdc7 475 SUPERFAMILY SSF103473 245 457 1.44E-58 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS25360 45309887d9ab5959943b9cff8ac0bdc7 475 SUPERFAMILY SSF103473 13 195 1.44E-58 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS22825 b8fbd7e971e10d4cb10475b0eb1206c3 117 Pfam PF13698 Domain of unknown function (DUF4156) 23 115 3.7E-33 T 09-03-2017 IPR025294 Protein of unknown function DUF4156 RG43_RS22825 b8fbd7e971e10d4cb10475b0eb1206c3 117 Gene3D G3DSA:3.50.50.60 16 89 8.4E-4 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS06380 7b2ac6818f57078c1087def2c187a208 165 Gene3D G3DSA:3.90.950.20 3 163 8.1E-63 T 09-03-2017 IPR008136 CinA, C-terminal RG43_RS06380 7b2ac6818f57078c1087def2c187a208 165 SUPERFAMILY SSF142433 3 161 6.41E-60 T 09-03-2017 IPR008136 CinA, C-terminal RG43_RS06380 7b2ac6818f57078c1087def2c187a208 165 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 13 158 2.1E-64 T 09-03-2017 IPR008136 CinA, C-terminal RG43_RS06380 7b2ac6818f57078c1087def2c187a208 165 Pfam PF02464 Competence-damaged protein 8 160 9.3E-61 T 09-03-2017 IPR008136 CinA, C-terminal RG43_RS25240 850143d49315e8891aad60bd107000ef 109 Gene3D G3DSA:3.40.30.10 2 108 3.5E-43 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS25240 850143d49315e8891aad60bd107000ef 109 PIRSF PIRSF000077 2 108 4.8E-45 T 09-03-2017 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RG43_RS25240 850143d49315e8891aad60bd107000ef 109 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 2.1E-39 T 09-03-2017 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RG43_RS25240 850143d49315e8891aad60bd107000ef 109 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 09-03-2017 IPR017937 Thioredoxin, conserved site GO:0045454 RG43_RS25240 850143d49315e8891aad60bd107000ef 109 Pfam PF00085 Thioredoxin 5 106 2.0E-34 T 09-03-2017 IPR013766 Thioredoxin domain GO:0045454 RG43_RS25240 850143d49315e8891aad60bd107000ef 109 SUPERFAMILY SSF52833 2 108 1.04E-41 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS25240 850143d49315e8891aad60bd107000ef 109 PRINTS PR00421 Thioredoxin family signature 24 32 3.8E-10 T 09-03-2017 RG43_RS25240 850143d49315e8891aad60bd107000ef 109 PRINTS PR00421 Thioredoxin family signature 72 83 3.8E-10 T 09-03-2017 RG43_RS25240 850143d49315e8891aad60bd107000ef 109 PRINTS PR00421 Thioredoxin family signature 32 41 3.8E-10 T 09-03-2017 RG43_RS03550 bc39f3e5374710d3f1a79e88b5b2c975 672 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 376 398 3.9E-6 T 09-03-2017 RG43_RS03550 bc39f3e5374710d3f1a79e88b5b2c975 672 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 619 633 3.9E-6 T 09-03-2017 RG43_RS03550 bc39f3e5374710d3f1a79e88b5b2c975 672 Gene3D G3DSA:3.20.20.70 3 360 1.1E-119 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS03550 bc39f3e5374710d3f1a79e88b5b2c975 672 SUPERFAMILY SSF51395 1 362 3.95E-109 T 09-03-2017 RG43_RS03550 bc39f3e5374710d3f1a79e88b5b2c975 672 SUPERFAMILY SSF51971 333 519 1.17E-41 T 09-03-2017 RG43_RS03550 bc39f3e5374710d3f1a79e88b5b2c975 672 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 376 635 2.1E-24 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS03550 bc39f3e5374710d3f1a79e88b5b2c975 672 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 497 515 7.9E-12 T 09-03-2017 RG43_RS03550 bc39f3e5374710d3f1a79e88b5b2c975 672 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 377 396 7.9E-12 T 09-03-2017 RG43_RS03550 bc39f3e5374710d3f1a79e88b5b2c975 672 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 618 634 7.9E-12 T 09-03-2017 RG43_RS03550 bc39f3e5374710d3f1a79e88b5b2c975 672 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 331 1.7E-105 T 09-03-2017 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 RG43_RS03550 bc39f3e5374710d3f1a79e88b5b2c975 672 Gene3D G3DSA:3.50.50.60 361 463 4.0E-25 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS03550 bc39f3e5374710d3f1a79e88b5b2c975 672 Gene3D G3DSA:3.50.50.60 469 625 2.6E-52 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS03550 bc39f3e5374710d3f1a79e88b5b2c975 672 SUPERFAMILY SSF51905 467 627 6.89E-27 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS18395 a22ec26a448e5fd7b7719c8adba4bf3a 381 Pfam PF02595 Glycerate kinase family 3 373 1.2E-145 T 09-03-2017 IPR004381 Glycerate kinase GO:0008887|GO:0031388 RG43_RS18395 a22ec26a448e5fd7b7719c8adba4bf3a 381 SUPERFAMILY SSF110738 1 375 1.44E-135 T 09-03-2017 IPR004381 Glycerate kinase GO:0008887|GO:0031388 RG43_RS18395 a22ec26a448e5fd7b7719c8adba4bf3a 381 PIRSF PIRSF006078 1 376 4.8E-133 T 09-03-2017 IPR004381 Glycerate kinase GO:0008887|GO:0031388 RG43_RS18395 a22ec26a448e5fd7b7719c8adba4bf3a 381 Gene3D G3DSA:3.90.1510.10 42 275 9.0E-99 T 09-03-2017 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 RG43_RS18395 a22ec26a448e5fd7b7719c8adba4bf3a 381 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 1.2E-169 T 09-03-2017 IPR004381 Glycerate kinase GO:0008887|GO:0031388 RG43_RS03320 10b5668980808f63c3f5f2330727d08c 154 Pfam PF11663 Toxin with endonuclease activity, of toxin-antitoxin system 12 150 5.1E-55 T 09-03-2017 IPR021679 Toxin endonuclease, YhaV RG43_RS14780 1fec7ccf6911162e957a2758e15f6524 507 Gene3D G3DSA:3.20.20.450 251 496 1.7E-77 T 09-03-2017 IPR001633 EAL domain RG43_RS14780 1fec7ccf6911162e957a2758e15f6524 507 SUPERFAMILY SSF141868 251 499 1.16E-76 T 09-03-2017 IPR001633 EAL domain RG43_RS14780 1fec7ccf6911162e957a2758e15f6524 507 Pfam PF00563 EAL domain 251 486 4.4E-65 T 09-03-2017 IPR001633 EAL domain RG43_RS14780 1fec7ccf6911162e957a2758e15f6524 507 Pfam PF12792 CSS motif domain associated with EAL 33 217 1.1E-25 T 09-03-2017 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain RG43_RS14780 1fec7ccf6911162e957a2758e15f6524 507 SMART SM00052 245 491 1.1E-115 T 09-03-2017 IPR001633 EAL domain RG43_RS07040 b0881e0acd697bfc3c9d8436f7a85216 332 Pfam PF02653 Branched-chain amino acid transport system / permease component 54 317 2.2E-42 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RG43_RS13915 b04842eab7943bed53406effe5908606 461 Pfam PF00324 Amino acid permease 27 408 7.5E-40 T 09-03-2017 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 RG43_RS13915 b04842eab7943bed53406effe5908606 461 PIRSF PIRSF006060 2 458 1.4E-78 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RG43_RS12475 b7863080f4dd562c0384e62c02f9cbfd 201 Gene3D G3DSA:3.40.30.10 1 88 1.4E-25 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS12475 b7863080f4dd562c0384e62c02f9cbfd 201 SUPERFAMILY SSF52833 1 79 1.97E-18 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS12475 b7863080f4dd562c0384e62c02f9cbfd 201 Pfam PF00043 Glutathione S-transferase, C-terminal domain 102 189 9.7E-18 T 09-03-2017 IPR004046 Glutathione S-transferase, C-terminal RG43_RS12475 b7863080f4dd562c0384e62c02f9cbfd 201 Gene3D G3DSA:1.20.1050.10 89 188 9.3E-41 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like RG43_RS12475 b7863080f4dd562c0384e62c02f9cbfd 201 SUPERFAMILY SSF47616 83 199 6.82E-30 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like RG43_RS12475 b7863080f4dd562c0384e62c02f9cbfd 201 Pfam PF13409 Glutathione S-transferase, N-terminal domain 14 75 3.5E-9 T 09-03-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RG43_RS15685 ca1d5680e759d25e247aa6567e6dc7fd 432 Gene3D G3DSA:3.40.50.1240 282 431 9.0E-78 T 09-03-2017 IPR029033 Histidine phosphatase superfamily RG43_RS15685 ca1d5680e759d25e247aa6567e6dc7fd 432 Gene3D G3DSA:3.40.50.1240 27 139 9.0E-78 T 09-03-2017 IPR029033 Histidine phosphatase superfamily RG43_RS15685 ca1d5680e759d25e247aa6567e6dc7fd 432 ProSitePatterns PS00616 Histidine acid phosphatases phosphohistidine signature. 30 44 - T 09-03-2017 IPR033379 Histidine acid phosphatase active site RG43_RS15685 ca1d5680e759d25e247aa6567e6dc7fd 432 Gene3D G3DSA:3.40.50.1240 140 280 2.4E-53 T 09-03-2017 IPR029033 Histidine phosphatase superfamily RG43_RS15685 ca1d5680e759d25e247aa6567e6dc7fd 432 SUPERFAMILY SSF53254 26 429 8.07E-81 T 09-03-2017 IPR029033 Histidine phosphatase superfamily RG43_RS15685 ca1d5680e759d25e247aa6567e6dc7fd 432 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 29 374 1.3E-32 T 09-03-2017 IPR000560 Histidine phosphatase superfamily, clade-2 GO:0003993 RG43_RS15685 ca1d5680e759d25e247aa6567e6dc7fd 432 ProSitePatterns PS00778 Histidine acid phosphatases active site signature. 319 335 - T 09-03-2017 IPR033379 Histidine acid phosphatase active site RG43_RS08550 6b5f380e7276b5f1aeef204dfdedcf93 319 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 9 315 3.8E-50 T 09-03-2017 IPR010106 Conserved hypothetical protein CHP01784 RG43_RS08550 6b5f380e7276b5f1aeef204dfdedcf93 319 Pfam PF04754 Putative transposase, YhgA-like 8 209 9.8E-86 T 09-03-2017 IPR006842 Transposase (putative), YhgA-like RG43_RS15895 7a97bda3a7741f9f53313d5fbe2e8e4c 381 Gene3D G3DSA:3.20.20.30 287 350 3.6E-104 T 09-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RG43_RS15895 7a97bda3a7741f9f53313d5fbe2e8e4c 381 Gene3D G3DSA:3.20.20.30 3 253 3.6E-104 T 09-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RG43_RS15895 7a97bda3a7741f9f53313d5fbe2e8e4c 381 SUPERFAMILY SSF51679 3 349 1.13E-98 T 09-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RG43_RS15895 7a97bda3a7741f9f53313d5fbe2e8e4c 381 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 4 349 5.4E-191 T 09-03-2017 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 RG43_RS15895 7a97bda3a7741f9f53313d5fbe2e8e4c 381 Pfam PF00296 Luciferase-like monooxygenase 5 326 1.2E-86 T 09-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RG43_RS15895 7a97bda3a7741f9f53313d5fbe2e8e4c 381 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 4 379 71.161 T 09-03-2017 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 RG43_RS26955 ceee6aaadebbddf1053891866b40fc3f 301 Pfam PF00665 Integrase core domain 124 243 2.3E-24 T 09-03-2017 IPR001584 Integrase, catalytic core GO:0015074 RG43_RS26955 ceee6aaadebbddf1053891866b40fc3f 301 Gene3D G3DSA:3.30.420.10 119 282 6.4E-33 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS26955 ceee6aaadebbddf1053891866b40fc3f 301 SUPERFAMILY SSF53098 125 291 1.13E-29 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS26955 ceee6aaadebbddf1053891866b40fc3f 301 Pfam PF13276 HTH-like domain 62 104 1.6E-11 T 09-03-2017 IPR025948 HTH-like domain RG43_RS02760 c638711cbdded3bee890efdd9a8123be 481 Pfam PF01523 Putative modulator of DNA gyrase 36 332 2.0E-63 T 09-03-2017 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 RG43_RS02760 c638711cbdded3bee890efdd9a8123be 481 PIRSF PIRSF004919 14 481 1.9E-158 T 09-03-2017 IPR025502 TldD RG43_RS02760 c638711cbdded3bee890efdd9a8123be 481 SUPERFAMILY SSF111283 22 480 1.57E-132 T 09-03-2017 RG43_RS14320 c0bc856d0f42ef561031c7160922c310 543 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 87 108 - T 09-03-2017 IPR023765 Solute-binding protein family 5, conserved site RG43_RS14320 c0bc856d0f42ef561031c7160922c310 543 Gene3D G3DSA:3.40.190.10 160 309 6.4E-56 T 09-03-2017 RG43_RS14320 c0bc856d0f42ef561031c7160922c310 543 SUPERFAMILY SSF53850 35 525 4.71E-147 T 09-03-2017 RG43_RS14320 c0bc856d0f42ef561031c7160922c310 543 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 463 1.8E-88 T 09-03-2017 IPR000914 Solute-binding protein family 5 domain RG43_RS14320 c0bc856d0f42ef561031c7160922c310 543 Gene3D G3DSA:3.10.105.10 310 511 6.8E-62 T 09-03-2017 RG43_RS14320 c0bc856d0f42ef561031c7160922c310 543 PIRSF PIRSF002741 1 543 2.2E-111 T 09-03-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RG43_RS08775 e7e732f195c2b45b50d9be60c9a66db8 200 SUPERFAMILY SSF48695 17 196 1.09E-64 T 09-03-2017 IPR011031 Multihaem cytochrome RG43_RS08775 e7e732f195c2b45b50d9be60c9a66db8 200 PIRSF PIRSF000013 1 200 4.7E-108 T 09-03-2017 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 RG43_RS08775 e7e732f195c2b45b50d9be60c9a66db8 200 TIGRFAM TIGR02161 napC_nirT: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 11 194 5.7E-106 T 09-03-2017 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT GO:0016021|GO:0019333|GO:0020037 RG43_RS08775 e7e732f195c2b45b50d9be60c9a66db8 200 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 22 193 2.0E-77 T 09-03-2017 IPR005126 NapC/NirT cytochrome c, N-terminal RG43_RS08775 e7e732f195c2b45b50d9be60c9a66db8 200 Gene3D G3DSA:1.10.3820.10 21 193 5.2E-28 T 09-03-2017 RG43_RS05090 1836d2a7dcdaeb204df3c468b1e68aa7 462 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 372 454 3.5E-12 T 09-03-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RG43_RS05090 1836d2a7dcdaeb204df3c468b1e68aa7 462 Gene3D G3DSA:3.40.50.10370 369 461 2.0E-32 T 09-03-2017 IPR029503 Phosphotransferase system EIIB component, mannitol-specific GO:0009401|GO:0022872 RG43_RS05090 1836d2a7dcdaeb204df3c468b1e68aa7 462 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 9 344 4.2E-144 T 09-03-2017 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 RG43_RS05090 1836d2a7dcdaeb204df3c468b1e68aa7 462 Pfam PF02378 Phosphotransferase system, EIIC 20 277 1.9E-22 T 09-03-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 RG43_RS05090 1836d2a7dcdaeb204df3c468b1e68aa7 462 SUPERFAMILY SSF52794 369 459 1.96E-22 T 09-03-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RG43_RS09500 4ed5676e1b1bfa82b39a8a407f81fffd 213 PRINTS PR00988 Uridine kinase signature 87 102 4.1E-39 T 09-03-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 RG43_RS09500 4ed5676e1b1bfa82b39a8a407f81fffd 213 PRINTS PR00988 Uridine kinase signature 157 168 4.1E-39 T 09-03-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 RG43_RS09500 4ed5676e1b1bfa82b39a8a407f81fffd 213 PRINTS PR00988 Uridine kinase signature 8 25 4.1E-39 T 09-03-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 RG43_RS09500 4ed5676e1b1bfa82b39a8a407f81fffd 213 PRINTS PR00988 Uridine kinase signature 143 153 4.1E-39 T 09-03-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 RG43_RS09500 4ed5676e1b1bfa82b39a8a407f81fffd 213 PRINTS PR00988 Uridine kinase signature 179 192 4.1E-39 T 09-03-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 RG43_RS09500 4ed5676e1b1bfa82b39a8a407f81fffd 213 PRINTS PR00988 Uridine kinase signature 42 53 4.1E-39 T 09-03-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 RG43_RS09500 4ed5676e1b1bfa82b39a8a407f81fffd 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 10 199 9.6E-45 T 09-03-2017 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 RG43_RS09500 4ed5676e1b1bfa82b39a8a407f81fffd 213 SUPERFAMILY SSF52540 8 205 2.58E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS09500 4ed5676e1b1bfa82b39a8a407f81fffd 213 TIGRFAM TIGR00235 udk: uridine kinase 5 213 1.9E-98 T 09-03-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 RG43_RS09500 4ed5676e1b1bfa82b39a8a407f81fffd 213 Hamap MF_00551 Uridine kinase [udk]. 5 213 42.04 T 09-03-2017 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 RG43_RS09500 4ed5676e1b1bfa82b39a8a407f81fffd 213 Gene3D G3DSA:3.40.50.300 3 205 6.3E-71 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS04925 3dcb56a3ba72355f20ddb0aa0d6d5989 108 Pfam PF04320 Protein with unknown function (DUF469) 7 107 2.7E-43 T 09-03-2017 IPR007416 Protein of unknown function DUF469 RG43_RS07615 ded884cbdc1ad9162fd1f7548b7f6267 291 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 2 275 7.3E-116 T 09-03-2017 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 RG43_RS07615 ded884cbdc1ad9162fd1f7548b7f6267 291 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 19 276 4.2E-112 T 09-03-2017 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 RG43_RS07615 ded884cbdc1ad9162fd1f7548b7f6267 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 275 1.9E-16 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS07615 ded884cbdc1ad9162fd1f7548b7f6267 291 Gene3D G3DSA:1.10.3720.10 19 281 1.7E-48 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS07615 ded884cbdc1ad9162fd1f7548b7f6267 291 SUPERFAMILY SSF161098 16 268 3.92E-52 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS16315 49c4d9bfb27dbc4f8534d093314f4013 375 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 307 338 - T 09-03-2017 IPR030390 RNA methyltransferase TrmA, active site RG43_RS16315 49c4d9bfb27dbc4f8534d093314f4013 375 Gene3D G3DSA:3.40.50.150 180 373 1.4E-50 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS16315 49c4d9bfb27dbc4f8534d093314f4013 375 SUPERFAMILY SSF53335 3 374 1.24E-54 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS16315 49c4d9bfb27dbc4f8534d093314f4013 375 Hamap MF_01012 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC [rlmC]. 1 375 79.752 T 09-03-2017 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 RG43_RS16315 49c4d9bfb27dbc4f8534d093314f4013 375 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 357 367 - T 09-03-2017 IPR030391 RNA methyltransferase TrmA, conserved site RG43_RS16315 49c4d9bfb27dbc4f8534d093314f4013 375 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 208 374 3.0E-16 T 09-03-2017 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 RG43_RS16315 49c4d9bfb27dbc4f8534d093314f4013 375 TIGRFAM TIGR02085 meth_trns_rumB: 23S rRNA (uracil-5-)-methyltransferase RumB 2 374 4.2E-221 T 09-03-2017 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 RG43_RS07065 0b6682edff766cebb254fefa56a2152c 270 Pfam PF00106 short chain dehydrogenase 9 194 2.0E-39 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS07065 0b6682edff766cebb254fefa56a2152c 270 SUPERFAMILY SSF51735 2 258 8.06E-53 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS07065 0b6682edff766cebb254fefa56a2152c 270 Hamap MF_01647 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase [hcaB]. 1 270 63.882 T 09-03-2017 IPR023643 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase HcaB GO:0016491|GO:0055114 KEGG: 00360+1.3.1.87|MetaCyc: PWY-6690 RG43_RS07065 0b6682edff766cebb254fefa56a2152c 270 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RG43_RS07065 0b6682edff766cebb254fefa56a2152c 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.0E-28 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS07065 0b6682edff766cebb254fefa56a2152c 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 4.0E-28 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS07065 0b6682edff766cebb254fefa56a2152c 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 4.0E-28 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS07065 0b6682edff766cebb254fefa56a2152c 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 4.0E-28 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS07065 0b6682edff766cebb254fefa56a2152c 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 4.0E-28 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS07065 0b6682edff766cebb254fefa56a2152c 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 4.0E-28 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS07065 0b6682edff766cebb254fefa56a2152c 270 Gene3D G3DSA:3.40.50.720 3 258 4.0E-54 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS07065 0b6682edff766cebb254fefa56a2152c 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 4.9E-5 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS07065 0b6682edff766cebb254fefa56a2152c 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 4.9E-5 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS07755 a7fe226b092d7ff2a24ab657ed7f93e0 114 ProDom PD060594 TRANSCRIPTION YFED YFEC DNA-BINDING REGULATION NEGATIVE REGULATOR STY2653 ECS3274 STY2652 1 114 1.0E-59 T 09-03-2017 IPR010749 Protein of unknown function DUF1323 RG43_RS07755 a7fe226b092d7ff2a24ab657ed7f93e0 114 Pfam PF07037 Putative transcription regulator (DUF1323) 1 113 9.8E-50 T 09-03-2017 IPR010749 Protein of unknown function DUF1323 RG43_RS07755 a7fe226b092d7ff2a24ab657ed7f93e0 114 SUPERFAMILY SSF46955 1 57 1.65E-12 T 09-03-2017 IPR009061 Putative DNA-binding domain RG43_RS07755 a7fe226b092d7ff2a24ab657ed7f93e0 114 Gene3D G3DSA:1.10.10.10 1 63 1.3E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS09915 a2e05cfa48b0c122fe2ec30e9819b0c7 290 Pfam PF01926 50S ribosome-binding GTPase 40 132 3.8E-13 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 RG43_RS09915 a2e05cfa48b0c122fe2ec30e9819b0c7 290 SUPERFAMILY SSF52540 21 234 2.56E-27 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS09915 a2e05cfa48b0c122fe2ec30e9819b0c7 290 Gene3D G3DSA:3.40.50.300 38 218 7.7E-29 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS14620 7824372d7f0663836214d60bff969c6b 203 Hamap MF_01381 Endo-type membrane-bound lytic murein transglycosylase A [emtA]. 1 203 68.048 T 09-03-2017 IPR023946 Endo-type membrane-bound lytic murein transglycosylase A GO:0008932|GO:0009279|GO:0016837|GO:0016998 RG43_RS14620 7824372d7f0663836214d60bff969c6b 203 Gene3D G3DSA:1.10.530.10 34 198 2.5E-30 T 09-03-2017 RG43_RS14620 7824372d7f0663836214d60bff969c6b 203 Pfam PF01464 Transglycosylase SLT domain 43 168 5.7E-29 T 09-03-2017 IPR008258 Transglycosylase SLT domain 1 RG43_RS14620 7824372d7f0663836214d60bff969c6b 203 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 60 88 - T 09-03-2017 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 RG43_RS14620 7824372d7f0663836214d60bff969c6b 203 SUPERFAMILY SSF53955 37 195 2.25E-26 T 09-03-2017 IPR023346 Lysozyme-like domain RG43_RS24625 5ec3575d9b14eee931b698244d283591 292 SUPERFAMILY SSF48179 164 291 2.15E-29 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RG43_RS24625 5ec3575d9b14eee931b698244d283591 292 Gene3D G3DSA:3.40.50.720 2 163 2.8E-53 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS24625 5ec3575d9b14eee931b698244d283591 292 PIRSF PIRSF000103 1 292 1.6E-113 T 09-03-2017 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 RG43_RS24625 5ec3575d9b14eee931b698244d283591 292 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 09-03-2017 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 RG43_RS24625 5ec3575d9b14eee931b698244d283591 292 Gene3D G3DSA:1.10.1040.10 164 291 2.2E-34 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RG43_RS24625 5ec3575d9b14eee931b698244d283591 292 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 160 2.5E-44 T 09-03-2017 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 RG43_RS24625 5ec3575d9b14eee931b698244d283591 292 Hamap MF_01913 3-sulfolactaldehyde reductase. 1 292 56.151 T 09-03-2017 IPR030876 3-sulfolactaldehyde reductase GO:0061596|GO:1902777 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|MetaCyc: PWY-7446 RG43_RS24625 5ec3575d9b14eee931b698244d283591 292 SUPERFAMILY SSF51735 1 162 1.97E-41 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS24625 5ec3575d9b14eee931b698244d283591 292 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 284 2.6E-25 T 09-03-2017 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 RG43_RS20810 7f7d0ac30172199cc2c67256f8c5fb7e 246 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 104 121 - T 09-03-2017 IPR018046 Pili assembly chaperone, conserved site RG43_RS20810 7f7d0ac30172199cc2c67256f8c5fb7e 246 Gene3D G3DSA:2.60.40.1070 155 242 1.6E-19 T 09-03-2017 IPR016148 Pili assembly chaperone, C-terminal RG43_RS20810 7f7d0ac30172199cc2c67256f8c5fb7e 246 Gene3D G3DSA:2.60.40.360 27 151 7.4E-46 T 09-03-2017 IPR008962 PapD-like RG43_RS20810 7f7d0ac30172199cc2c67256f8c5fb7e 246 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 27 151 2.8E-43 T 09-03-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 RG43_RS20810 7f7d0ac30172199cc2c67256f8c5fb7e 246 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 177 239 5.3E-17 T 09-03-2017 IPR016148 Pili assembly chaperone, C-terminal RG43_RS20810 7f7d0ac30172199cc2c67256f8c5fb7e 246 SUPERFAMILY SSF49584 155 244 5.76E-19 T 09-03-2017 IPR016148 Pili assembly chaperone, C-terminal RG43_RS20810 7f7d0ac30172199cc2c67256f8c5fb7e 246 SUPERFAMILY SSF49354 21 151 9.16E-42 T 09-03-2017 IPR008962 PapD-like RG43_RS20810 7f7d0ac30172199cc2c67256f8c5fb7e 246 PRINTS PR00969 Pili chaperone signature 172 187 3.0E-35 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS20810 7f7d0ac30172199cc2c67256f8c5fb7e 246 PRINTS PR00969 Pili chaperone signature 76 97 3.0E-35 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS20810 7f7d0ac30172199cc2c67256f8c5fb7e 246 PRINTS PR00969 Pili chaperone signature 27 36 3.0E-35 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS20810 7f7d0ac30172199cc2c67256f8c5fb7e 246 PRINTS PR00969 Pili chaperone signature 105 122 3.0E-35 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS20810 7f7d0ac30172199cc2c67256f8c5fb7e 246 PRINTS PR00969 Pili chaperone signature 133 148 3.0E-35 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS10415 661a33181b2df2073b2b7f36ba2d666b 160 Pfam PF05119 Phage terminase, small subunit 49 146 1.2E-24 T 09-03-2017 IPR006448 Putative phage terminase, small subunit, P27 family RG43_RS10415 661a33181b2df2073b2b7f36ba2d666b 160 TIGRFAM TIGR01558 sm_term_P27: putative phage terminase, small subunit, P27 family 40 150 1.6E-32 T 09-03-2017 IPR006448 Putative phage terminase, small subunit, P27 family RG43_RS18810 be175fae90c64d4e251742b3a98a8abe 432 Gene3D G3DSA:3.10.50.40 151 215 1.3E-9 T 09-03-2017 RG43_RS18810 be175fae90c64d4e251742b3a98a8abe 432 PIRSF PIRSF003095 1 432 1.3E-131 T 09-03-2017 IPR005215 Trigger factor GO:0015031 RG43_RS18810 be175fae90c64d4e251742b3a98a8abe 432 Hamap MF_00303 Trigger factor [tig]. 1 418 22.209 T 09-03-2017 IPR005215 Trigger factor GO:0015031 RG43_RS18810 be175fae90c64d4e251742b3a98a8abe 432 Gene3D G3DSA:3.30.70.1050 1 117 1.4E-39 T 09-03-2017 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 RG43_RS18810 be175fae90c64d4e251742b3a98a8abe 432 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 262 412 8.6E-41 T 09-03-2017 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 RG43_RS18810 be175fae90c64d4e251742b3a98a8abe 432 SUPERFAMILY SSF102735 1 131 5.62E-39 T 09-03-2017 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 RG43_RS18810 be175fae90c64d4e251742b3a98a8abe 432 SUPERFAMILY SSF54534 97 241 2.16E-37 T 09-03-2017 RG43_RS18810 be175fae90c64d4e251742b3a98a8abe 432 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 2.0E-41 T 09-03-2017 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 RG43_RS18810 be175fae90c64d4e251742b3a98a8abe 432 TIGRFAM TIGR00115 tig: trigger factor 13 412 1.1E-143 T 09-03-2017 IPR005215 Trigger factor GO:0015031 RG43_RS18810 be175fae90c64d4e251742b3a98a8abe 432 SUPERFAMILY SSF109998 248 429 1.09E-47 T 09-03-2017 IPR027304 Trigger factor/SurA domain RG43_RS18810 be175fae90c64d4e251742b3a98a8abe 432 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 158 236 2.6E-14 T 09-03-2017 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 RG43_RS18810 be175fae90c64d4e251742b3a98a8abe 432 Gene3D G3DSA:1.10.3120.10 216 388 1.4E-62 T 09-03-2017 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 RG43_RS11445 ac6550df35d76a4f981336f112386fd3 232 SMART SM00945 5 119 6.6E-60 T 09-03-2017 IPR016103 ProQ/FinO domain RG43_RS11445 ac6550df35d76a4f981336f112386fd3 232 Gene3D G3DSA:1.10.1710.10 4 118 3.3E-36 T 09-03-2017 IPR016103 ProQ/FinO domain RG43_RS11445 ac6550df35d76a4f981336f112386fd3 232 Hamap MF_00749 RNA chaperone ProQ [proQ]. 3 231 30.419 T 09-03-2017 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 RG43_RS11445 ac6550df35d76a4f981336f112386fd3 232 SUPERFAMILY SSF48657 5 119 5.23E-40 T 09-03-2017 IPR016103 ProQ/FinO domain RG43_RS11445 ac6550df35d76a4f981336f112386fd3 232 Pfam PF04352 ProQ/FINO family 8 115 5.0E-42 T 09-03-2017 IPR016103 ProQ/FinO domain RG43_RS25055 cd9da0cb6e8b5fa40b63fb915baf0b61 238 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 207 8.8E-14 T 09-03-2017 IPR023214 HAD-like domain RG43_RS25055 cd9da0cb6e8b5fa40b63fb915baf0b61 238 Gene3D G3DSA:3.40.50.1000 10 236 7.9E-29 T 09-03-2017 IPR023214 HAD-like domain RG43_RS25055 cd9da0cb6e8b5fa40b63fb915baf0b61 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 104 199 3.6E-11 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RG43_RS25055 cd9da0cb6e8b5fa40b63fb915baf0b61 238 SUPERFAMILY SSF56784 10 238 1.53E-39 T 09-03-2017 IPR023214 HAD-like domain RG43_RS21795 3a20811860fd83fc5985fe52fc54224b 245 Gene3D G3DSA:3.40.50.300 51 222 4.5E-34 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS21795 3a20811860fd83fc5985fe52fc54224b 245 Pfam PF01695 IstB-like ATP binding protein 93 218 1.6E-17 T 09-03-2017 IPR002611 IstB-like ATP-binding protein GO:0005524 RG43_RS21795 3a20811860fd83fc5985fe52fc54224b 245 PIRSF PIRSF003073 1 245 1.0E-35 T 09-03-2017 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein RG43_RS21795 3a20811860fd83fc5985fe52fc54224b 245 SMART SM00382 98 227 2.3E-5 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS21795 3a20811860fd83fc5985fe52fc54224b 245 SUPERFAMILY SSF52540 64 226 7.04E-22 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS00945 2455e392b06fb0d63a60f5dde5dbac53 303 Gene3D G3DSA:1.20.58.180 215 298 5.4E-37 T 09-03-2017 RG43_RS00945 2455e392b06fb0d63a60f5dde5dbac53 303 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 8 301 2.3E-178 T 09-03-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RG43_RS00945 2455e392b06fb0d63a60f5dde5dbac53 303 SUPERFAMILY SSF55681 8 292 2.61E-134 T 09-03-2017 RG43_RS00945 2455e392b06fb0d63a60f5dde5dbac53 303 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 293 62.833 T 09-03-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RG43_RS00945 2455e392b06fb0d63a60f5dde5dbac53 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 4.1E-71 T 09-03-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RG43_RS00945 2455e392b06fb0d63a60f5dde5dbac53 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 4.1E-71 T 09-03-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RG43_RS00945 2455e392b06fb0d63a60f5dde5dbac53 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 4.1E-71 T 09-03-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RG43_RS00945 2455e392b06fb0d63a60f5dde5dbac53 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 4.1E-71 T 09-03-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RG43_RS00945 2455e392b06fb0d63a60f5dde5dbac53 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 4.1E-71 T 09-03-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RG43_RS00945 2455e392b06fb0d63a60f5dde5dbac53 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 4.1E-71 T 09-03-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RG43_RS00945 2455e392b06fb0d63a60f5dde5dbac53 303 Gene3D G3DSA:3.30.930.10 4 213 9.5E-107 T 09-03-2017 RG43_RS00945 2455e392b06fb0d63a60f5dde5dbac53 303 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 291 5.5E-150 T 09-03-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RG43_RS23735 590187720a9b36add72d79d3329696a1 211 Pfam PF02581 Thiamine monophosphate synthase/TENI 20 189 1.9E-55 T 09-03-2017 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RG43_RS23735 590187720a9b36add72d79d3329696a1 211 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 10 207 19.879 T 09-03-2017 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RG43_RS23735 590187720a9b36add72d79d3329696a1 211 Gene3D G3DSA:3.20.20.70 6 204 3.4E-67 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS23735 590187720a9b36add72d79d3329696a1 211 SUPERFAMILY SSF51391 6 205 6.41E-64 T 09-03-2017 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RG43_RS23735 590187720a9b36add72d79d3329696a1 211 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 20 202 1.4E-58 T 09-03-2017 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RG43_RS12610 62bb5a54ff5f9abd62e28494f23f6c75 548 SUPERFAMILY SSF117457 361 536 6.67E-62 T 09-03-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 RG43_RS12610 62bb5a54ff5f9abd62e28494f23f6c75 548 ProSitePatterns PS00163 Fumarate lyases signature. 456 465 - T 09-03-2017 IPR020557 Fumarate lyase, conserved site GO:0003824 RG43_RS12610 62bb5a54ff5f9abd62e28494f23f6c75 548 Gene3D G3DSA:3.20.130.10 348 537 4.8E-76 T 09-03-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 RG43_RS12610 62bb5a54ff5f9abd62e28494f23f6c75 548 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 74 325 6.7E-31 T 09-03-2017 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 RG43_RS12610 62bb5a54ff5f9abd62e28494f23f6c75 548 Pfam PF05681 Fumarate hydratase (Fumerase) 51 326 2.1E-86 T 09-03-2017 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 RG43_RS12610 62bb5a54ff5f9abd62e28494f23f6c75 548 PIRSF PIRSF001394 30 548 7.7E-239 T 09-03-2017 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 RG43_RS12610 62bb5a54ff5f9abd62e28494f23f6c75 548 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 373 537 2.6E-62 T 09-03-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 RG43_RS12610 62bb5a54ff5f9abd62e28494f23f6c75 548 Pfam PF05683 Fumarase C-terminus 332 537 2.3E-94 T 09-03-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 RG43_RS26145 256491c492eeef40329c17d67818e66e 161 ProDom PD012854 PLASMID KLCA ANTIRESTRICTION YFJX YCIB ARDB STABLE YFEB Z1216 C0275 64 161 7.0E-51 T 09-03-2017 IPR004914 Antirestriction protein RG43_RS26145 256491c492eeef40329c17d67818e66e 161 Pfam PF03230 Antirestriction protein 66 161 5.9E-36 T 09-03-2017 IPR004914 Antirestriction protein RG43_RS03770 256491c492eeef40329c17d67818e66e 161 ProDom PD012854 PLASMID KLCA ANTIRESTRICTION YFJX YCIB ARDB STABLE YFEB Z1216 C0275 64 161 7.0E-51 T 09-03-2017 IPR004914 Antirestriction protein RG43_RS03770 256491c492eeef40329c17d67818e66e 161 Pfam PF03230 Antirestriction protein 66 161 5.9E-36 T 09-03-2017 IPR004914 Antirestriction protein RG43_RS10550 d2746611cc5570bac58fe123700fa606 137 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 27 137 5.9E-45 T 09-03-2017 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394 RG43_RS10550 d2746611cc5570bac58fe123700fa606 137 Pfam PF00576 HIUase/Transthyretin family 29 136 4.2E-38 T 09-03-2017 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 RG43_RS10550 d2746611cc5570bac58fe123700fa606 137 PRINTS PR00189 Transthyretin signature 115 137 1.1E-13 T 09-03-2017 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 RG43_RS10550 d2746611cc5570bac58fe123700fa606 137 PRINTS PR00189 Transthyretin signature 28 48 1.1E-13 T 09-03-2017 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 RG43_RS10550 d2746611cc5570bac58fe123700fa606 137 PRINTS PR00189 Transthyretin signature 60 85 1.1E-13 T 09-03-2017 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 RG43_RS10550 d2746611cc5570bac58fe123700fa606 137 SMART SM00095 24 136 8.1E-4 T 09-03-2017 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 RG43_RS10550 d2746611cc5570bac58fe123700fa606 137 ProSitePatterns PS00769 Transthyretin signature 2. 120 132 - T 09-03-2017 IPR023419 Transthyretin, conserved site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 RG43_RS10550 d2746611cc5570bac58fe123700fa606 137 SUPERFAMILY SSF49472 26 137 3.66E-43 T 09-03-2017 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 RG43_RS10550 d2746611cc5570bac58fe123700fa606 137 ProSitePatterns PS00768 Transthyretin signature 1. 32 47 - T 09-03-2017 IPR023418 Transthyretin, thyroxine binding site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 RG43_RS10550 d2746611cc5570bac58fe123700fa606 137 Gene3D G3DSA:2.60.40.180 25 137 5.1E-44 T 09-03-2017 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 RG43_RS23845 88695c786a249fdf871be093ee90d405 321 Gene3D G3DSA:2.30.30.100 271 320 2.8E-24 T 09-03-2017 RG43_RS23845 88695c786a249fdf871be093ee90d405 321 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 7 317 33.072 T 09-03-2017 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 RG43_RS23845 88695c786a249fdf871be093ee90d405 321 Pfam PF02237 Biotin protein ligase C terminal domain 271 317 1.2E-11 T 09-03-2017 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RG43_RS23845 88695c786a249fdf871be093ee90d405 321 Pfam PF03099 Biotin/lipoate A/B protein ligase family 84 208 3.4E-26 T 09-03-2017 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 RG43_RS23845 88695c786a249fdf871be093ee90d405 321 TIGRFAM TIGR00122 birA_repr_reg: biotin operon repressor 6 76 3.3E-31 T 09-03-2017 IPR004409 Biotin operon repressor, helix-turn-helix domain GO:0006355 KEGG: 00780+6.3.4.15 RG43_RS23845 88695c786a249fdf871be093ee90d405 321 Gene3D G3DSA:3.30.930.10 71 269 5.6E-59 T 09-03-2017 RG43_RS23845 88695c786a249fdf871be093ee90d405 321 SUPERFAMILY SSF55681 69 268 3.85E-59 T 09-03-2017 RG43_RS23845 88695c786a249fdf871be093ee90d405 321 Pfam PF08279 HTH domain 9 58 9.0E-13 T 09-03-2017 IPR013196 Helix-turn-helix, type 11 RG43_RS23845 88695c786a249fdf871be093ee90d405 321 SUPERFAMILY SSF46785 3 60 5.56E-14 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS23845 88695c786a249fdf871be093ee90d405 321 SUPERFAMILY SSF50037 271 317 7.32E-11 T 09-03-2017 IPR008988 Transcriptional repressor, C-terminal RG43_RS23845 88695c786a249fdf871be093ee90d405 321 Gene3D G3DSA:1.10.10.10 1 63 9.3E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS23845 88695c786a249fdf871be093ee90d405 321 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 81 317 2.2E-87 T 09-03-2017 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RG43_RS25050 2d8cb0d1593dada736404297fa854c25 720 SUPERFAMILY SSF52540 7 642 1.72E-182 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25050 2d8cb0d1593dada736404297fa854c25 720 Pfam PF13361 UvrD-like helicase C-terminal domain 277 616 1.2E-75 T 09-03-2017 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RG43_RS25050 2d8cb0d1593dada736404297fa854c25 720 Gene3D G3DSA:1.10.486.10 388 541 1.5E-52 T 09-03-2017 RG43_RS25050 2d8cb0d1593dada736404297fa854c25 720 Gene3D G3DSA:3.40.50.300 191 285 1.5E-69 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25050 2d8cb0d1593dada736404297fa854c25 720 Gene3D G3DSA:3.40.50.300 5 110 1.5E-69 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25050 2d8cb0d1593dada736404297fa854c25 720 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 271 6.8E-76 T 09-03-2017 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RG43_RS25050 2d8cb0d1593dada736404297fa854c25 720 Gene3D G3DSA:3.40.50.300 286 387 5.7E-73 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25050 2d8cb0d1593dada736404297fa854c25 720 Gene3D G3DSA:3.40.50.300 552 642 5.7E-73 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25050 2d8cb0d1593dada736404297fa854c25 720 Gene3D G3DSA:1.10.10.160 114 190 1.0E-26 T 09-03-2017 IPR013986 DExx box DNA helicase domain RG43_RS25050 2d8cb0d1593dada736404297fa854c25 720 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 718 0.0 T 09-03-2017 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 RG43_RS08560 d54cf1007c357679b434b12a70b11a81 419 PIRSF PIRSF000141 1 418 2.7E-173 T 09-03-2017 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RG43_RS08560 d54cf1007c357679b434b12a70b11a81 419 SUPERFAMILY SSF51905 249 416 4.8E-20 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS08560 d54cf1007c357679b434b12a70b11a81 419 SUPERFAMILY SSF51905 1 74 4.8E-20 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS08560 d54cf1007c357679b434b12a70b11a81 419 Pfam PF00890 FAD binding domain 4 399 1.2E-61 T 09-03-2017 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 RG43_RS08560 d54cf1007c357679b434b12a70b11a81 419 TIGRFAM TIGR03378 glycerol3P_GlpB: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit 3 411 2.6E-178 T 09-03-2017 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RG43_RS08560 d54cf1007c357679b434b12a70b11a81 419 Gene3D G3DSA:3.50.50.60 1 53 8.6E-22 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS08560 d54cf1007c357679b434b12a70b11a81 419 Gene3D G3DSA:3.50.50.60 254 415 8.6E-22 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS08560 d54cf1007c357679b434b12a70b11a81 419 Hamap MF_00753 Anaerobic glycerol-3-phosphate dehydrogenase subunit B [glpB]. 1 415 50.126 T 09-03-2017 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RG43_RS18485 c4754d09ae14ec5e7424f68cc36e0bf9 225 Gene3D G3DSA:3.40.50.300 5 219 7.9E-59 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS18485 c4754d09ae14ec5e7424f68cc36e0bf9 225 SMART SM00382 32 213 6.5E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS18485 c4754d09ae14ec5e7424f68cc36e0bf9 225 Pfam PF00005 ABC transporter 23 166 4.5E-31 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS18485 c4754d09ae14ec5e7424f68cc36e0bf9 225 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS18485 c4754d09ae14ec5e7424f68cc36e0bf9 225 SUPERFAMILY SSF52540 5 211 3.03E-54 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS00865 784c0640d8be6636ea44c4b03c3a54d7 332 Pfam PF02615 Malate/L-lactate dehydrogenase 3 330 5.4E-102 T 09-03-2017 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 RG43_RS00865 784c0640d8be6636ea44c4b03c3a54d7 332 SUPERFAMILY SSF89733 1 332 5.49E-94 T 09-03-2017 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 RG43_RS00865 784c0640d8be6636ea44c4b03c3a54d7 332 Gene3D G3DSA:3.30.60.50 181 219 5.6E-25 T 09-03-2017 RG43_RS00865 784c0640d8be6636ea44c4b03c3a54d7 332 Hamap MF_00820 2,3-diketo-L-gulonate reductase [dlgD]. 1 332 89.219 T 09-03-2017 IPR023689 2,3-diketo-L-gulonate reductase GO:0016616|GO:0047559|GO:0055114|GO:0070403 KEGG: 00040+1.1.1.13+1.1.1.130|KEGG: 00053+1.1.1.130|MetaCyc: PWY-6961 RG43_RS00865 784c0640d8be6636ea44c4b03c3a54d7 332 Gene3D G3DSA:1.10.1530.10 1 73 3.4E-27 T 09-03-2017 RG43_RS00865 784c0640d8be6636ea44c4b03c3a54d7 332 Gene3D G3DSA:3.30.1370.60 74 170 9.5E-57 T 09-03-2017 RG43_RS00865 784c0640d8be6636ea44c4b03c3a54d7 332 Gene3D G3DSA:3.30.1370.60 220 269 9.5E-57 T 09-03-2017 RG43_RS21190 9d96343c1723b184bd38ee8656d1b463 201 Gene3D G3DSA:3.20.19.10 6 196 1.9E-48 T 09-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RG43_RS21190 9d96343c1723b184bd38ee8656d1b463 201 SUPERFAMILY SSF52016 4 193 1.24E-59 T 09-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RG43_RS21190 9d96343c1723b184bd38ee8656d1b463 201 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 2 200 44.663 T 09-03-2017 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 RG43_RS21190 9d96343c1723b184bd38ee8656d1b463 201 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 3 189 7.4E-104 T 09-03-2017 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 RG43_RS21190 9d96343c1723b184bd38ee8656d1b463 201 Pfam PF00694 Aconitase C-terminal domain 3 126 5.1E-40 T 09-03-2017 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 RG43_RS16375 8a51f12ff0ff6f351a5087b594abfae7 125 Pfam PF11045 Putative inner membrane protein of Enterobacteriaceae 3 117 2.5E-46 T 09-03-2017 IPR020368 Uncharacterised protein family YbjM GO:0016021 RG43_RS16375 8a51f12ff0ff6f351a5087b594abfae7 125 ProDom PD079046 MEMBRANE INNER YBJM TRANSMEMBRANE 1 118 7.0E-61 T 09-03-2017 IPR020368 Uncharacterised protein family YbjM GO:0016021 RG43_RS03755 277b859346ad0d02a09e9a6a8cb54779 290 Pfam PF01926 50S ribosome-binding GTPase 39 134 3.3E-14 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 RG43_RS03755 277b859346ad0d02a09e9a6a8cb54779 290 Gene3D G3DSA:3.40.50.300 33 218 8.6E-32 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS03755 277b859346ad0d02a09e9a6a8cb54779 290 SUPERFAMILY SSF52540 25 246 1.36E-31 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS26130 277b859346ad0d02a09e9a6a8cb54779 290 Pfam PF01926 50S ribosome-binding GTPase 39 134 3.3E-14 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 RG43_RS26130 277b859346ad0d02a09e9a6a8cb54779 290 Gene3D G3DSA:3.40.50.300 33 218 8.6E-32 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS26130 277b859346ad0d02a09e9a6a8cb54779 290 SUPERFAMILY SSF52540 25 246 1.36E-31 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25690 bc3819132600b6e5b8c4193e9c3bb8d4 292 Pfam PF05035 2-keto-3-deoxy-galactonokinase 9 286 5.2E-97 T 09-03-2017 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130 RG43_RS16385 65646c01bd712f5483197e9bb4866a7b 178 SUPERFAMILY SSF48498 98 175 2.13E-7 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RG43_RS16385 65646c01bd712f5483197e9bb4866a7b 178 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 1.8E-8 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RG43_RS16385 65646c01bd712f5483197e9bb4866a7b 178 SUPERFAMILY SSF46689 2 81 5.13E-14 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS16385 65646c01bd712f5483197e9bb4866a7b 178 Gene3D G3DSA:1.10.357.10 8 176 1.2E-32 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RG43_RS17495 f8c761a69817b9b0f9f928a036966725 169 Pfam PF08349 Protein of unknown function (DUF1722) 41 158 5.2E-35 T 09-03-2017 IPR013560 Domain of unknown function DUF1722 RG43_RS04565 03d21dd27beace45e602cc6b20095267 301 Pfam PF13276 HTH-like domain 62 104 5.6E-12 T 09-03-2017 IPR025948 HTH-like domain RG43_RS04565 03d21dd27beace45e602cc6b20095267 301 Gene3D G3DSA:3.30.420.10 120 282 2.8E-33 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS04565 03d21dd27beace45e602cc6b20095267 301 Pfam PF00665 Integrase core domain 124 243 5.5E-25 T 09-03-2017 IPR001584 Integrase, catalytic core GO:0015074 RG43_RS04565 03d21dd27beace45e602cc6b20095267 301 SUPERFAMILY SSF53098 121 292 1.26E-29 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS25980 03d21dd27beace45e602cc6b20095267 301 Pfam PF13276 HTH-like domain 62 104 5.6E-12 T 09-03-2017 IPR025948 HTH-like domain RG43_RS25980 03d21dd27beace45e602cc6b20095267 301 Gene3D G3DSA:3.30.420.10 120 282 2.8E-33 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS25980 03d21dd27beace45e602cc6b20095267 301 Pfam PF00665 Integrase core domain 124 243 5.5E-25 T 09-03-2017 IPR001584 Integrase, catalytic core GO:0015074 RG43_RS25980 03d21dd27beace45e602cc6b20095267 301 SUPERFAMILY SSF53098 121 292 1.26E-29 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS03345 5314430e8fff97a81c2d038c348ad1b4 296 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 166 283 6.7E-38 T 09-03-2017 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 RG43_RS03345 5314430e8fff97a81c2d038c348ad1b4 296 SUPERFAMILY SSF51735 2 164 1.41E-49 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS03345 5314430e8fff97a81c2d038c348ad1b4 296 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 4 294 7.7E-157 T 09-03-2017 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 RG43_RS03345 5314430e8fff97a81c2d038c348ad1b4 296 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 163 4.2E-51 T 09-03-2017 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 RG43_RS03345 5314430e8fff97a81c2d038c348ad1b4 296 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 7 20 - T 09-03-2017 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 RG43_RS03345 5314430e8fff97a81c2d038c348ad1b4 296 PIRSF PIRSF000103 1 295 1.5E-96 T 09-03-2017 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 RG43_RS03345 5314430e8fff97a81c2d038c348ad1b4 296 SUPERFAMILY SSF48179 164 293 5.44E-37 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RG43_RS03345 5314430e8fff97a81c2d038c348ad1b4 296 Hamap MF_02032 2-hydroxy-3-oxopropionate reductase [garR]. 3 296 61.888 T 09-03-2017 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 RG43_RS03345 5314430e8fff97a81c2d038c348ad1b4 296 Gene3D G3DSA:1.10.1040.10 166 294 1.3E-43 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RG43_RS03345 5314430e8fff97a81c2d038c348ad1b4 296 Gene3D G3DSA:3.40.50.720 1 164 2.1E-62 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS18980 7ed156598f56304141f45c97a3f53492 605 Gene3D G3DSA:3.20.20.80 118 523 1.2E-106 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RG43_RS18980 7ed156598f56304141f45c97a3f53492 605 SUPERFAMILY SSF81296 13 104 7.0E-9 T 09-03-2017 IPR014756 Immunoglobulin E-set RG43_RS18980 7ed156598f56304141f45c97a3f53492 605 Pfam PF00128 Alpha amylase, catalytic domain 178 494 1.5E-87 T 09-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RG43_RS18980 7ed156598f56304141f45c97a3f53492 605 SMART SM00642 128 522 3.2E-90 T 09-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RG43_RS18980 7ed156598f56304141f45c97a3f53492 605 PIRSF PIRSF036918 1 604 7.2E-245 T 09-03-2017 IPR017069 Maltodextrin glucosidase GO:0004558|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.20|KEGG: 00500+3.2.1.20|MetaCyc: PWY-842 RG43_RS18980 7ed156598f56304141f45c97a3f53492 605 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 2 106 4.6E-9 T 09-03-2017 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 RG43_RS18980 7ed156598f56304141f45c97a3f53492 605 SUPERFAMILY SSF51011 531 604 1.96E-8 T 09-03-2017 RG43_RS18980 7ed156598f56304141f45c97a3f53492 605 Gene3D G3DSA:2.60.40.1180 526 569 1.9E-7 T 09-03-2017 IPR013780 Glycosyl hydrolase, all-beta RG43_RS18980 7ed156598f56304141f45c97a3f53492 605 SUPERFAMILY SSF51445 118 531 7.48E-89 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily RG43_RS21215 c95e35f87d216104be453b8844de3760 232 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS21215 c95e35f87d216104be453b8844de3760 232 Pfam PF00005 ABC transporter 18 157 1.1E-36 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS21215 c95e35f87d216104be453b8844de3760 232 SMART SM00382 24 209 2.4E-19 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS21215 c95e35f87d216104be453b8844de3760 232 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 214 1.2E-118 T 09-03-2017 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0006810|GO:0016021|GO:0042626 RG43_RS21215 c95e35f87d216104be453b8844de3760 232 Gene3D G3DSA:3.40.50.300 17 224 5.2E-66 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS21215 c95e35f87d216104be453b8844de3760 232 SUPERFAMILY SSF52540 1 222 8.75E-66 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS22645 50ba39a5e7587e96d30d0fca5fd4db4b 65 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 60 1.4E-21 T 09-03-2017 IPR019201 Protein of unknown function DUF2065 RG43_RS08390 26e88bb20aa45666ba298fd045b8a027 100 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 100 19.378 T 09-03-2017 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 RG43_RS08390 26e88bb20aa45666ba298fd045b8a027 100 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 95 5.0E-21 T 09-03-2017 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 RG43_RS01825 7460d3137df034824a0bf2bde846903b 532 Gene3D G3DSA:3.40.50.300 184 359 2.5E-39 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS01825 7460d3137df034824a0bf2bde846903b 532 Gene3D G3DSA:1.10.8.60 363 440 3.6E-12 T 09-03-2017 RG43_RS01825 7460d3137df034824a0bf2bde846903b 532 SUPERFAMILY SSF52540 187 438 1.3E-49 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS01825 7460d3137df034824a0bf2bde846903b 532 Pfam PF06956 Regulator of RNA terminal phosphate cyclase 2 185 3.6E-81 T 09-03-2017 IPR009715 Regulator of RNA terminal phosphate cyclase RG43_RS01825 7460d3137df034824a0bf2bde846903b 532 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 276 291 - T 09-03-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RG43_RS01825 7460d3137df034824a0bf2bde846903b 532 PIRSF PIRSF037354 1 527 3.6E-294 T 09-03-2017 IPR017183 Sigma54-dependent transcriptional activator, RtcR GO:0003700|GO:0006355 RG43_RS01825 7460d3137df034824a0bf2bde846903b 532 Pfam PF00158 Sigma-54 interaction domain 188 354 1.0E-50 T 09-03-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RG43_RS01825 7460d3137df034824a0bf2bde846903b 532 SMART SM00382 207 353 2.4E-6 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS22840 e02443b354bd6a7db3f57d3662700850 418 PIRSF PIRSF006060 1 412 4.2E-58 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RG43_RS22840 e02443b354bd6a7db3f57d3662700850 418 Pfam PF13520 Amino acid permease 8 370 9.5E-30 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RG43_RS09770 ade076102156db772f5271aaa33a8a32 299 Pfam PF08029 HisG, C-terminal domain 223 296 1.4E-24 T 09-03-2017 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 RG43_RS09770 ade076102156db772f5271aaa33a8a32 299 SUPERFAMILY SSF54913 226 298 7.11E-22 T 09-03-2017 IPR011322 Nitrogen regulatory PII-like, alpha/beta RG43_RS09770 ade076102156db772f5271aaa33a8a32 299 Gene3D G3DSA:3.40.190.10 2 139 2.0E-54 T 09-03-2017 RG43_RS09770 ade076102156db772f5271aaa33a8a32 299 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 156 177 - T 09-03-2017 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 RG43_RS09770 ade076102156db772f5271aaa33a8a32 299 Pfam PF01634 ATP phosphoribosyltransferase 54 219 2.7E-48 T 09-03-2017 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 RG43_RS09770 ade076102156db772f5271aaa33a8a32 299 Gene3D G3DSA:3.30.70.120 226 299 1.7E-31 T 09-03-2017 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RG43_RS09770 ade076102156db772f5271aaa33a8a32 299 SUPERFAMILY SSF53850 6 224 3.48E-70 T 09-03-2017 RG43_RS09770 ade076102156db772f5271aaa33a8a32 299 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 6 299 36.028 T 09-03-2017 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 RG43_RS09770 ade076102156db772f5271aaa33a8a32 299 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 200 298 1.1E-33 T 09-03-2017 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 RG43_RS09770 ade076102156db772f5271aaa33a8a32 299 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 7 197 1.1E-57 T 09-03-2017 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 RG43_RS25840 18dec49612fa54a0d45fbb468989c30c 444 Pfam PF00860 Permease family 32 405 1.2E-45 T 09-03-2017 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RG43_RS25840 18dec49612fa54a0d45fbb468989c30c 444 PIRSF PIRSF005353 6 444 1.3E-170 T 09-03-2017 IPR026033 Purine permease PbuG-like RG43_RS18285 24ba5cd13c1cd4a1dce58d0658d54095 317 SUPERFAMILY SSF69917 23 317 2.88E-117 T 09-03-2017 IPR020080 Outer membrane adhesin/peptidase omptin GO:0004190 RG43_RS18285 24ba5cd13c1cd4a1dce58d0658d54095 317 ProSitePatterns PS00834 Aspartyl proteases, omptin family signature 1. 115 124 - T 09-03-2017 IPR020079 Peptidase A26, omptin, conserved site GO:0004175|GO:0006508|GO:0009279 RG43_RS18285 24ba5cd13c1cd4a1dce58d0658d54095 317 Gene3D G3DSA:2.40.128.90 24 317 3.0E-124 T 09-03-2017 IPR023619 Peptidase A26 GO:0004190 RG43_RS18285 24ba5cd13c1cd4a1dce58d0658d54095 317 PRINTS PR00482 Omptin serine protease signature 36 50 4.2E-115 T 09-03-2017 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 RG43_RS18285 24ba5cd13c1cd4a1dce58d0658d54095 317 PRINTS PR00482 Omptin serine protease signature 56 81 4.2E-115 T 09-03-2017 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 RG43_RS18285 24ba5cd13c1cd4a1dce58d0658d54095 317 PRINTS PR00482 Omptin serine protease signature 82 107 4.2E-115 T 09-03-2017 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 RG43_RS18285 24ba5cd13c1cd4a1dce58d0658d54095 317 PRINTS PR00482 Omptin serine protease signature 115 142 4.2E-115 T 09-03-2017 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 RG43_RS18285 24ba5cd13c1cd4a1dce58d0658d54095 317 PRINTS PR00482 Omptin serine protease signature 240 260 4.2E-115 T 09-03-2017 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 RG43_RS18285 24ba5cd13c1cd4a1dce58d0658d54095 317 PRINTS PR00482 Omptin serine protease signature 261 281 4.2E-115 T 09-03-2017 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 RG43_RS18285 24ba5cd13c1cd4a1dce58d0658d54095 317 PRINTS PR00482 Omptin serine protease signature 212 233 4.2E-115 T 09-03-2017 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 RG43_RS18285 24ba5cd13c1cd4a1dce58d0658d54095 317 PRINTS PR00482 Omptin serine protease signature 143 170 4.2E-115 T 09-03-2017 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 RG43_RS18285 24ba5cd13c1cd4a1dce58d0658d54095 317 PRINTS PR00482 Omptin serine protease signature 190 211 4.2E-115 T 09-03-2017 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 RG43_RS18285 24ba5cd13c1cd4a1dce58d0658d54095 317 ProSitePatterns PS00835 Aspartyl proteases, omptin family signature 2. 152 168 - T 09-03-2017 IPR020079 Peptidase A26, omptin, conserved site GO:0004175|GO:0006508|GO:0009279 RG43_RS18285 24ba5cd13c1cd4a1dce58d0658d54095 317 PIRSF PIRSF001522 1 317 2.3E-138 T 09-03-2017 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 RG43_RS18285 24ba5cd13c1cd4a1dce58d0658d54095 317 Pfam PF01278 Omptin family 28 317 1.8E-121 T 09-03-2017 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 RG43_RS23115 c49b400a139ae7c3e602a6413adb819f 378 SUPERFAMILY SSF51556 50 345 2.04E-22 T 09-03-2017 IPR032466 Metal-dependent hydrolase RG43_RS23115 c49b400a139ae7c3e602a6413adb819f 378 PIRSF PIRSF038971 1 378 1.2E-154 T 09-03-2017 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399 RG43_RS23115 c49b400a139ae7c3e602a6413adb819f 378 TIGRFAM TIGR02318 phosphono_phnM: phosphonate metabolism protein PhnM 2 378 4.2E-167 T 09-03-2017 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399 RG43_RS23115 c49b400a139ae7c3e602a6413adb819f 378 Gene3D G3DSA:3.20.20.140 89 376 3.3E-9 T 09-03-2017 RG43_RS23115 c49b400a139ae7c3e602a6413adb819f 378 SUPERFAMILY SSF51338 1 50 1.32E-11 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RG43_RS23115 c49b400a139ae7c3e602a6413adb819f 378 SUPERFAMILY SSF51338 345 377 1.32E-11 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RG43_RS23115 c49b400a139ae7c3e602a6413adb819f 378 Pfam PF07969 Amidohydrolase family 166 378 2.2E-12 T 09-03-2017 IPR013108 Amidohydrolase 3 RG43_RS23115 c49b400a139ae7c3e602a6413adb819f 378 Gene3D G3DSA:2.30.40.10 1 88 2.5E-11 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RG43_RS24140 94a3eaf73454c249034860575bc1b891 336 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 322 4.0E-133 T 09-03-2017 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 RG43_RS24140 94a3eaf73454c249034860575bc1b891 336 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 335 5.4E-189 T 09-03-2017 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 RG43_RS24140 94a3eaf73454c249034860575bc1b891 336 Gene3D G3DSA:3.30.540.10 171 332 6.1E-49 T 09-03-2017 RG43_RS24140 94a3eaf73454c249034860575bc1b891 336 Gene3D G3DSA:3.30.540.10 1 170 1.5E-70 T 09-03-2017 RG43_RS24140 94a3eaf73454c249034860575bc1b891 336 SUPERFAMILY SSF56655 2 325 3.48E-112 T 09-03-2017 RG43_RS24140 94a3eaf73454c249034860575bc1b891 336 PIRSF PIRSF004532 1 333 4.4E-143 T 09-03-2017 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 RG43_RS01785 e6bbf73926fd540dbd6f289101ce2d42 373 Pfam PF00419 Fimbrial protein 217 373 5.2E-16 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS01785 e6bbf73926fd540dbd6f289101ce2d42 373 Gene3D G3DSA:2.60.40.1090 220 373 8.9E-12 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS01785 e6bbf73926fd540dbd6f289101ce2d42 373 SUPERFAMILY SSF49401 219 373 7.95E-14 T 09-03-2017 IPR008966 Adhesion domain RG43_RS14860 f8f7718782c9cd0df309d3e97c3ba3d1 213 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 207 36.339 T 09-03-2017 IPR007451 Uncharacterised protein family UPF0274 RG43_RS14860 f8f7718782c9cd0df309d3e97c3ba3d1 213 Gene3D G3DSA:1.10.3890.10 2 209 1.3E-88 T 09-03-2017 IPR007451 Uncharacterised protein family UPF0274 RG43_RS14860 f8f7718782c9cd0df309d3e97c3ba3d1 213 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 205 1.0E-108 T 09-03-2017 IPR007451 Uncharacterised protein family UPF0274 RG43_RS14860 f8f7718782c9cd0df309d3e97c3ba3d1 213 Pfam PF04356 Protein of unknown function (DUF489) 7 199 5.5E-75 T 09-03-2017 IPR007451 Uncharacterised protein family UPF0274 RG43_RS14860 f8f7718782c9cd0df309d3e97c3ba3d1 213 SUPERFAMILY SSF101322 2 210 6.15E-82 T 09-03-2017 IPR007451 Uncharacterised protein family UPF0274 RG43_RS11810 ee572cb4202207749c31ae7a00d68cb5 447 SMART SM00839 204 445 1.4E-93 T 09-03-2017 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 RG43_RS11810 ee572cb4202207749c31ae7a00d68cb5 447 PIRSF PIRSF000185 22 447 1.6E-114 T 09-03-2017 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 RG43_RS11810 ee572cb4202207749c31ae7a00d68cb5 447 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 202 445 2.5E-87 T 09-03-2017 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 RG43_RS11810 ee572cb4202207749c31ae7a00d68cb5 447 Gene3D G3DSA:1.10.285.10 373 446 6.6E-26 T 09-03-2017 RG43_RS11810 ee572cb4202207749c31ae7a00d68cb5 447 Gene3D G3DSA:1.10.285.10 7 67 5.2E-28 T 09-03-2017 RG43_RS11810 ee572cb4202207749c31ae7a00d68cb5 447 Gene3D G3DSA:3.40.50.720 209 372 1.5E-63 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS11810 ee572cb4202207749c31ae7a00d68cb5 447 SUPERFAMILY SSF53223 6 196 6.4E-74 T 09-03-2017 RG43_RS11810 ee572cb4202207749c31ae7a00d68cb5 447 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 57 184 7.1E-49 T 09-03-2017 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 RG43_RS11810 ee572cb4202207749c31ae7a00d68cb5 447 Gene3D G3DSA:3.40.192.10 68 188 8.2E-61 T 09-03-2017 RG43_RS11810 ee572cb4202207749c31ae7a00d68cb5 447 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 122 135 - T 09-03-2017 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-70614 RG43_RS11810 ee572cb4202207749c31ae7a00d68cb5 447 SUPERFAMILY SSF51735 202 446 7.67E-77 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS11810 ee572cb4202207749c31ae7a00d68cb5 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 235 255 2.5E-33 T 09-03-2017 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 RG43_RS11810 ee572cb4202207749c31ae7a00d68cb5 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 114 128 2.5E-33 T 09-03-2017 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 RG43_RS11810 ee572cb4202207749c31ae7a00d68cb5 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 372 383 2.5E-33 T 09-03-2017 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 RG43_RS11810 ee572cb4202207749c31ae7a00d68cb5 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 193 215 2.5E-33 T 09-03-2017 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 RG43_RS21590 bb1f374437e3094649892593cd21fbe7 171 Gene3D G3DSA:3.90.950.10 2 168 1.0E-63 T 09-03-2017 IPR029001 Inosine triphosphate pyrophosphatase-like RG43_RS21590 bb1f374437e3094649892593cd21fbe7 171 Hamap MF_00648 Non-canonical purine NTP phosphatase. 2 171 30.21 T 09-03-2017 IPR002786 Non-canonical purine NTP phosphatase RG43_RS21590 bb1f374437e3094649892593cd21fbe7 171 SUPERFAMILY SSF52972 1 167 2.7E-58 T 09-03-2017 IPR029001 Inosine triphosphate pyrophosphatase-like RG43_RS21590 bb1f374437e3094649892593cd21fbe7 171 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 6 170 1.9E-72 T 09-03-2017 IPR002786 Non-canonical purine NTP phosphatase RG43_RS21590 bb1f374437e3094649892593cd21fbe7 171 Pfam PF01931 Protein of unknown function DUF84 7 166 6.8E-53 T 09-03-2017 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 RG43_RS15570 b6410f5a19d84b437a4db1366c9fb559 848 Gene3D G3DSA:3.90.55.10 517 620 7.1E-34 T 09-03-2017 RG43_RS15570 b6410f5a19d84b437a4db1366c9fb559 848 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 730 757 - T 09-03-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 RG43_RS15570 b6410f5a19d84b437a4db1366c9fb559 848 Pfam PF01568 Molydopterin dinucleotide binding domain 690 811 6.2E-25 T 09-03-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RG43_RS15570 b6410f5a19d84b437a4db1366c9fb559 848 SUPERFAMILY SSF50692 684 832 1.56E-45 T 09-03-2017 IPR009010 Aspartate decarboxylase-like domain RG43_RS15570 b6410f5a19d84b437a4db1366c9fb559 848 Gene3D G3DSA:3.40.50.740 92 193 6.5E-47 T 09-03-2017 RG43_RS15570 b6410f5a19d84b437a4db1366c9fb559 848 Gene3D G3DSA:3.40.50.740 408 516 6.5E-47 T 09-03-2017 RG43_RS15570 b6410f5a19d84b437a4db1366c9fb559 848 Pfam PF00384 Molybdopterin oxidoreductase 99 572 1.1E-105 T 09-03-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS15570 b6410f5a19d84b437a4db1366c9fb559 848 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 515 532 - T 09-03-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 RG43_RS15570 b6410f5a19d84b437a4db1366c9fb559 848 TIGRFAM TIGR02164 torA: trimethylamine-N-oxide reductase TorA 7 835 0.0 T 09-03-2017 IPR011887 Trimethylamine-N-oxide reductase TorA GO:0030151|GO:0042597|GO:0050626 RG43_RS15570 b6410f5a19d84b437a4db1366c9fb559 848 Gene3D G3DSA:2.40.40.20 663 827 1.3E-60 T 09-03-2017 RG43_RS15570 b6410f5a19d84b437a4db1366c9fb559 848 SUPERFAMILY SSF53706 57 674 3.27E-160 T 09-03-2017 RG43_RS15570 b6410f5a19d84b437a4db1366c9fb559 848 Gene3D G3DSA:3.40.228.10 197 407 6.0E-52 T 09-03-2017 RG43_RS15570 b6410f5a19d84b437a4db1366c9fb559 848 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 56 835 0.0 T 09-03-2017 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 RG43_RS18960 71affcd52404a53dba2f3b6f1bfef285 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 59 77 3.1E-17 T 09-03-2017 IPR003849 Preprotein translocase YajC RG43_RS18960 71affcd52404a53dba2f3b6f1bfef285 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 21 41 3.1E-17 T 09-03-2017 IPR003849 Preprotein translocase YajC RG43_RS18960 71affcd52404a53dba2f3b6f1bfef285 110 SMART SM01323 19 102 4.0E-37 T 09-03-2017 IPR003849 Preprotein translocase YajC RG43_RS18960 71affcd52404a53dba2f3b6f1bfef285 110 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 19 102 3.0E-35 T 09-03-2017 IPR003849 Preprotein translocase YajC RG43_RS18960 71affcd52404a53dba2f3b6f1bfef285 110 Pfam PF02699 Preprotein translocase subunit 22 99 2.4E-26 T 09-03-2017 IPR003849 Preprotein translocase YajC RG43_RS14070 14303662561815729cd506cb95d39cd6 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.6E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS14070 14303662561815729cd506cb95d39cd6 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.6E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS14070 14303662561815729cd506cb95d39cd6 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.6E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS14070 14303662561815729cd506cb95d39cd6 324 SUPERFAMILY SSF53850 91 322 1.47E-46 T 09-03-2017 RG43_RS14070 14303662561815729cd506cb95d39cd6 324 Gene3D G3DSA:3.40.190.10 185 261 6.9E-32 T 09-03-2017 RG43_RS14070 14303662561815729cd506cb95d39cd6 324 Gene3D G3DSA:3.40.190.10 92 184 6.7E-21 T 09-03-2017 RG43_RS14070 14303662561815729cd506cb95d39cd6 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 5.4E-15 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS14070 14303662561815729cd506cb95d39cd6 324 SUPERFAMILY SSF46785 1 85 3.16E-13 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS14070 14303662561815729cd506cb95d39cd6 324 Gene3D G3DSA:1.10.10.10 1 81 9.9E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS14070 14303662561815729cd506cb95d39cd6 324 Pfam PF03466 LysR substrate binding domain 92 292 8.0E-43 T 09-03-2017 IPR005119 LysR, substrate-binding RG43_RS16610 d962aea9b7b9c38ce1279676995871e7 741 Pfam PF00924 Mechanosensitive ion channel 515 714 1.1E-43 T 09-03-2017 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 RG43_RS16610 d962aea9b7b9c38ce1279676995871e7 741 SUPERFAMILY SSF82861 477 556 3.66E-12 T 09-03-2017 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 RG43_RS16610 d962aea9b7b9c38ce1279676995871e7 741 SUPERFAMILY SSF82689 627 722 2.62E-8 T 09-03-2017 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 RG43_RS16610 d962aea9b7b9c38ce1279676995871e7 741 SUPERFAMILY SSF50182 558 616 1.28E-9 T 09-03-2017 IPR010920 LSM domain RG43_RS16610 d962aea9b7b9c38ce1279676995871e7 741 Gene3D G3DSA:2.30.30.60 576 616 3.3E-8 T 09-03-2017 RG43_RS18020 04377931ed81f7d86f78bf954acdc363 292 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 26 290 1.7E-82 T 09-03-2017 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 RG43_RS18020 04377931ed81f7d86f78bf954acdc363 292 Hamap MF_00397 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [citG]. 3 292 183.435 T 09-03-2017 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 RG43_RS18020 04377931ed81f7d86f78bf954acdc363 292 TIGRFAM TIGR03125 citrate_citG: triphosphoribosyl-dephospho-CoA synthase CitG 21 291 4.7E-109 T 09-03-2017 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 RG43_RS17870 195e3eebb8f0043dc7198a619ee16f5c 193 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 4 164 26.199 T 09-03-2017 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 RG43_RS17870 195e3eebb8f0043dc7198a619ee16f5c 193 Pfam PF04390 Lipopolysaccharide-assembly 11 159 5.2E-22 T 09-03-2017 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 RG43_RS17870 195e3eebb8f0043dc7198a619ee16f5c 193 Gene3D G3DSA:3.30.160.150 19 171 1.5E-58 T 09-03-2017 RG43_RS17925 c5537f0fb5d70cd67aa8beeb54656c33 213 Pfam PF03099 Biotin/lipoate A/B protein ligase family 62 159 4.8E-7 T 09-03-2017 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 RG43_RS17925 c5537f0fb5d70cd67aa8beeb54656c33 213 SUPERFAMILY SSF55681 4 204 2.57E-68 T 09-03-2017 RG43_RS17925 c5537f0fb5d70cd67aa8beeb54656c33 213 Gene3D G3DSA:3.90.1550.10 4 202 1.4E-70 T 09-03-2017 RG43_RS17925 c5537f0fb5d70cd67aa8beeb54656c33 213 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 26 204 4.9E-84 T 09-03-2017 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 RG43_RS17925 c5537f0fb5d70cd67aa8beeb54656c33 213 PIRSF PIRSF016262 2 210 4.5E-57 T 09-03-2017 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 RG43_RS17925 c5537f0fb5d70cd67aa8beeb54656c33 213 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 71 86 - T 09-03-2017 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 RG43_RS17925 c5537f0fb5d70cd67aa8beeb54656c33 213 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 75 128 9.0E-24 T 09-03-2017 RG43_RS17925 c5537f0fb5d70cd67aa8beeb54656c33 213 Hamap MF_00013 Octanoyltransferase [lipB]. 5 206 37.643 T 09-03-2017 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 RG43_RS25375 19be1fe83a694bc8fcd9e001003ab5fe 296 Gene3D G3DSA:3.40.50.2300 27 144 4.1E-44 T 09-03-2017 RG43_RS25375 19be1fe83a694bc8fcd9e001003ab5fe 296 Pfam PF13407 Periplasmic binding protein domain 29 281 2.2E-58 T 09-03-2017 IPR025997 Periplasmic binding protein RG43_RS25375 19be1fe83a694bc8fcd9e001003ab5fe 296 SUPERFAMILY SSF53822 26 295 1.1E-88 T 09-03-2017 IPR028082 Periplasmic binding protein-like I RG43_RS25375 19be1fe83a694bc8fcd9e001003ab5fe 296 Gene3D G3DSA:3.40.50.2300 145 295 6.8E-55 T 09-03-2017 RG43_RS12210 64c850bb918a31acbefa8a5c44437e7f 136 SUPERFAMILY SSF54637 1 133 1.94E-29 T 09-03-2017 IPR029069 HotDog domain RG43_RS12210 64c850bb918a31acbefa8a5c44437e7f 136 Gene3D G3DSA:3.10.129.10 1 136 8.9E-52 T 09-03-2017 IPR029069 HotDog domain RG43_RS12210 64c850bb918a31acbefa8a5c44437e7f 136 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 20 134 2.2E-47 T 09-03-2017 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-75105 RG43_RS12210 64c850bb918a31acbefa8a5c44437e7f 136 Hamap MF_01936 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [menI]. 1 136 48.703 T 09-03-2017 IPR030863 1,4-dihydroxy-2-naphthoyl-CoA hydrolase, MenI GO:0009234|GO:0061522 KEGG: 00130+3.1.2.28|MetaCyc: PWY-5837 RG43_RS12210 64c850bb918a31acbefa8a5c44437e7f 136 Pfam PF03061 Thioesterase superfamily 50 127 9.6E-17 T 09-03-2017 IPR006683 Thioesterase domain Reactome: R-HSA-75105 RG43_RS23720 3205b547df4f8ce2cc8d2b2018bfda56 257 SUPERFAMILY SSF55811 3 96 2.03E-31 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 RG43_RS23720 3205b547df4f8ce2cc8d2b2018bfda56 257 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 93 124 4.9E-10 T 09-03-2017 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 RG43_RS23720 3205b547df4f8ce2cc8d2b2018bfda56 257 ProSitePatterns PS00893 Nudix box signature. 159 180 - T 09-03-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RG43_RS23720 3205b547df4f8ce2cc8d2b2018bfda56 257 Gene3D G3DSA:3.90.79.10 93 246 2.4E-42 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 RG43_RS23720 3205b547df4f8ce2cc8d2b2018bfda56 257 Pfam PF00293 NUDIX domain 132 234 1.6E-17 T 09-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 RG43_RS23720 3205b547df4f8ce2cc8d2b2018bfda56 257 SUPERFAMILY SSF55811 79 241 1.62E-40 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 RG43_RS23720 3205b547df4f8ce2cc8d2b2018bfda56 257 Hamap MF_00297 NADH pyrophosphatase [nudC]. 1 257 47.915 T 09-03-2017 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 RG43_RS01830 2fc038321908602f51f2949adf3fcc55 408 SUPERFAMILY SSF103365 7 408 5.36E-142 T 09-03-2017 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 RG43_RS01830 2fc038321908602f51f2949adf3fcc55 408 ProSitePatterns PS01288 Uncharacterized protein family UPF0027 signature. 29 58 - T 09-03-2017 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 RG43_RS01830 2fc038321908602f51f2949adf3fcc55 408 Pfam PF01139 tRNA-splicing ligase RtcB 29 408 1.6E-138 T 09-03-2017 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 RG43_RS22005 ba1465bb0a10492e54b37d0353273c73 257 Gene3D G3DSA:1.10.10.10 6 76 9.6E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS22005 ba1465bb0a10492e54b37d0353273c73 257 Gene3D G3DSA:1.20.120.530 94 234 1.6E-32 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal RG43_RS22005 ba1465bb0a10492e54b37d0353273c73 257 SUPERFAMILY SSF46785 2 77 5.57E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS22005 ba1465bb0a10492e54b37d0353273c73 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 4.9E-9 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS22005 ba1465bb0a10492e54b37d0353273c73 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 4.9E-9 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS22005 ba1465bb0a10492e54b37d0353273c73 257 SUPERFAMILY SSF48008 95 234 3.4E-28 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal RG43_RS22005 ba1465bb0a10492e54b37d0353273c73 257 SMART SM00895 97 226 6.6E-22 T 09-03-2017 IPR011711 GntR, C-terminal RG43_RS22005 ba1465bb0a10492e54b37d0353273c73 257 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 73 3.8E-23 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS22005 ba1465bb0a10492e54b37d0353273c73 257 SMART SM00345 14 73 9.6E-26 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS22005 ba1465bb0a10492e54b37d0353273c73 257 Pfam PF07729 FCD domain 97 225 1.9E-20 T 09-03-2017 IPR011711 GntR, C-terminal RG43_RS06130 0856dc608b1d4b7dbbc35dee969c97f8 253 Gene3D G3DSA:3.40.1210.10 1 246 7.1E-85 T 09-03-2017 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 RG43_RS06130 0856dc608b1d4b7dbbc35dee969c97f8 253 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 249 40.359 T 09-03-2017 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 RG43_RS06130 0856dc608b1d4b7dbbc35dee969c97f8 253 SUPERFAMILY SSF64167 1 246 3.4E-83 T 09-03-2017 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 RG43_RS06130 0856dc608b1d4b7dbbc35dee969c97f8 253 Pfam PF01975 Survival protein SurE 3 180 4.9E-56 T 09-03-2017 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 RG43_RS06130 0856dc608b1d4b7dbbc35dee969c97f8 253 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 232 2.3E-80 T 09-03-2017 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 RG43_RS05930 49ff6fc65ed111112ee76be427a82132 744 Pfam PF02824 TGS domain 406 465 2.6E-21 T 09-03-2017 IPR004095 TGS KEGG: 00970+6.1.1.3 RG43_RS05930 49ff6fc65ed111112ee76be427a82132 744 Gene3D G3DSA:3.30.460.10 194 340 4.4E-50 T 09-03-2017 RG43_RS05930 49ff6fc65ed111112ee76be427a82132 744 SMART SM00954 251 361 8.7E-66 T 09-03-2017 IPR007685 RelA/SpoT GO:0015969 RG43_RS05930 49ff6fc65ed111112ee76be427a82132 744 SUPERFAMILY SSF81301 196 410 1.41E-63 T 09-03-2017 RG43_RS05930 49ff6fc65ed111112ee76be427a82132 744 Pfam PF13328 HD domain 44 191 3.6E-40 T 09-03-2017 IPR003607 HD/PDEase domain RG43_RS05930 49ff6fc65ed111112ee76be427a82132 744 Pfam PF04607 Region found in RelA / SpoT proteins 251 360 1.8E-36 T 09-03-2017 IPR007685 RelA/SpoT GO:0015969 RG43_RS05930 49ff6fc65ed111112ee76be427a82132 744 SUPERFAMILY SSF109604 27 207 3.77E-45 T 09-03-2017 RG43_RS05930 49ff6fc65ed111112ee76be427a82132 744 Gene3D G3DSA:3.10.20.30 406 467 5.9E-26 T 09-03-2017 IPR012675 Beta-grasp domain RG43_RS05930 49ff6fc65ed111112ee76be427a82132 744 Gene3D G3DSA:3.30.70.260 664 739 8.2E-29 T 09-03-2017 RG43_RS05930 49ff6fc65ed111112ee76be427a82132 744 Pfam PF13291 ACT domain 664 740 6.7E-18 T 09-03-2017 IPR002912 ACT domain GO:0008152|GO:0016597 RG43_RS05930 49ff6fc65ed111112ee76be427a82132 744 SUPERFAMILY SSF81271 399 465 5.07E-22 T 09-03-2017 IPR012676 TGS-like KEGG: 00970+6.1.1.3 RG43_RS05930 49ff6fc65ed111112ee76be427a82132 744 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 63 739 2.1E-186 T 09-03-2017 IPR004811 RelA/SpoT family GO:0015969 RG43_RS05930 49ff6fc65ed111112ee76be427a82132 744 SUPERFAMILY SSF55021 665 741 1.76E-14 T 09-03-2017 RG43_RS02780 46501f726a4e8f005e5215f3755163e9 655 Hamap MF_01545 p-hydroxybenzoic acid efflux pump subunit AaeB [aaeB]. 3 653 54.89 T 09-03-2017 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB GO:0005886|GO:0006810 RG43_RS02780 46501f726a4e8f005e5215f3755163e9 655 Pfam PF04632 Fusaric acid resistance protein family 11 651 3.5E-166 T 09-03-2017 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 RG43_RS18920 726e62e250bbd136faca4fd18d794103 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.65 T 09-03-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RG43_RS18920 726e62e250bbd136faca4fd18d794103 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 3.3E-60 T 09-03-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RG43_RS18920 726e62e250bbd136faca4fd18d794103 156 SUPERFAMILY SSF52121 4 154 7.85E-59 T 09-03-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RG43_RS18920 726e62e250bbd136faca4fd18d794103 156 Gene3D G3DSA:3.40.50.960 2 152 3.0E-63 T 09-03-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RG43_RS18920 726e62e250bbd136faca4fd18d794103 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 2.1E-54 T 09-03-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RG43_RS14725 48e12cecac761e9a37f181be663a4bfe 88 Gene3D G3DSA:3.30.1070.10 31 85 6.0E-26 T 09-03-2017 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 RG43_RS14725 48e12cecac761e9a37f181be663a4bfe 88 SUPERFAMILY SSF55229 32 85 1.22E-18 T 09-03-2017 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 RG43_RS14725 48e12cecac761e9a37f181be663a4bfe 88 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 86 19.958 T 09-03-2017 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 RG43_RS14725 48e12cecac761e9a37f181be663a4bfe 88 Pfam PF03776 Septum formation topological specificity factor MinE 14 82 4.0E-25 T 09-03-2017 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 RG43_RS14725 48e12cecac761e9a37f181be663a4bfe 88 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 83 3.4E-37 T 09-03-2017 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 RG43_RS23110 348d0688886d5d5dbf929b3bb4eb8d39 226 TIGRFAM TIGR02324 CP_lyasePhnL: phosphonate C-P lyase system protein PhnL 1 218 3.2E-112 T 09-03-2017 IPR012701 Phosphonate C-P lyase system, PhnL KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 RG43_RS23110 348d0688886d5d5dbf929b3bb4eb8d39 226 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS23110 348d0688886d5d5dbf929b3bb4eb8d39 226 Gene3D G3DSA:3.40.50.300 1 220 3.5E-50 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS23110 348d0688886d5d5dbf929b3bb4eb8d39 226 SMART SM00382 33 226 2.4E-7 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS23110 348d0688886d5d5dbf929b3bb4eb8d39 226 SUPERFAMILY SSF52540 2 222 2.4E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS23110 348d0688886d5d5dbf929b3bb4eb8d39 226 Pfam PF00005 ABC transporter 24 178 1.5E-29 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS08455 fee40d4ca185e3eaf50add88f5e77e13 285 SUPERFAMILY SSF52096 16 280 7.54E-79 T 09-03-2017 IPR029045 ClpP/crotonase-like domain RG43_RS08455 fee40d4ca185e3eaf50add88f5e77e13 285 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 15 284 55.624 T 09-03-2017 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 RG43_RS08455 fee40d4ca185e3eaf50add88f5e77e13 285 Gene3D G3DSA:3.90.226.10 22 222 1.7E-70 T 09-03-2017 IPR029045 ClpP/crotonase-like domain RG43_RS08455 fee40d4ca185e3eaf50add88f5e77e13 285 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 123 143 - T 09-03-2017 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 RG43_RS08455 fee40d4ca185e3eaf50add88f5e77e13 285 Pfam PF00378 Enoyl-CoA hydratase/isomerase 31 279 8.5E-79 T 09-03-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RG43_RS08455 fee40d4ca185e3eaf50add88f5e77e13 285 Gene3D G3DSA:1.10.12.10 223 273 2.3E-30 T 09-03-2017 IPR014748 Crontonase, C-terminal RG43_RS08455 fee40d4ca185e3eaf50add88f5e77e13 285 TIGRFAM TIGR01929 menB: naphthoate synthase 22 281 7.6E-152 T 09-03-2017 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 RG43_RS10730 691a3d59b279bebb2ddd108b16cca226 228 Pfam PF02108 Flagellar assembly protein FliH 96 219 1.2E-40 T 09-03-2017 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE RG43_RS10730 691a3d59b279bebb2ddd108b16cca226 228 PRINTS PR01003 Flagellar assembly protein FliH signature 133 155 1.9E-119 T 09-03-2017 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 RG43_RS10730 691a3d59b279bebb2ddd108b16cca226 228 PRINTS PR01003 Flagellar assembly protein FliH signature 184 200 1.9E-119 T 09-03-2017 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 RG43_RS10730 691a3d59b279bebb2ddd108b16cca226 228 PRINTS PR01003 Flagellar assembly protein FliH signature 53 75 1.9E-119 T 09-03-2017 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 RG43_RS10730 691a3d59b279bebb2ddd108b16cca226 228 PRINTS PR01003 Flagellar assembly protein FliH signature 76 94 1.9E-119 T 09-03-2017 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 RG43_RS10730 691a3d59b279bebb2ddd108b16cca226 228 PRINTS PR01003 Flagellar assembly protein FliH signature 5 24 1.9E-119 T 09-03-2017 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 RG43_RS10730 691a3d59b279bebb2ddd108b16cca226 228 PRINTS PR01003 Flagellar assembly protein FliH signature 156 183 1.9E-119 T 09-03-2017 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 RG43_RS10730 691a3d59b279bebb2ddd108b16cca226 228 PRINTS PR01003 Flagellar assembly protein FliH signature 201 226 1.9E-119 T 09-03-2017 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 RG43_RS10730 691a3d59b279bebb2ddd108b16cca226 228 PRINTS PR01003 Flagellar assembly protein FliH signature 115 132 1.9E-119 T 09-03-2017 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 RG43_RS10730 691a3d59b279bebb2ddd108b16cca226 228 PRINTS PR01003 Flagellar assembly protein FliH signature 95 114 1.9E-119 T 09-03-2017 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 RG43_RS23180 ef71ca4e519a3f8917a56c06af77af42 661 Pfam PF00753 Metallo-beta-lactamase superfamily 129 355 1.3E-49 T 09-03-2017 IPR001279 Metallo-beta-lactamase RG43_RS23180 ef71ca4e519a3f8917a56c06af77af42 661 Pfam PF14863 Alkyl sulfatase dimerisation 392 530 2.2E-55 T 09-03-2017 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 RG43_RS23180 ef71ca4e519a3f8917a56c06af77af42 661 Gene3D G3DSA:3.30.1050.10 546 643 1.3E-5 T 09-03-2017 IPR003033 SCP2 sterol-binding domain RG43_RS23180 ef71ca4e519a3f8917a56c06af77af42 661 Pfam PF14864 Alkyl sulfatase C-terminal 539 660 2.2E-33 T 09-03-2017 IPR029229 Alkyl sulfatase, C-terminal RG43_RS23180 ef71ca4e519a3f8917a56c06af77af42 661 Gene3D G3DSA:3.60.15.10 118 219 1.2E-46 T 09-03-2017 IPR001279 Metallo-beta-lactamase RG43_RS23180 ef71ca4e519a3f8917a56c06af77af42 661 Gene3D G3DSA:3.60.15.10 262 385 1.2E-46 T 09-03-2017 IPR001279 Metallo-beta-lactamase RG43_RS23180 ef71ca4e519a3f8917a56c06af77af42 661 SUPERFAMILY SSF55718 541 660 8.71E-30 T 09-03-2017 IPR003033 SCP2 sterol-binding domain RG43_RS23180 ef71ca4e519a3f8917a56c06af77af42 661 SUPERFAMILY SSF56281 33 533 1.2E-148 T 09-03-2017 IPR001279 Metallo-beta-lactamase RG43_RS23180 ef71ca4e519a3f8917a56c06af77af42 661 SMART SM00849 133 355 4.0E-27 T 09-03-2017 IPR001279 Metallo-beta-lactamase RG43_RS07890 64ea4b5f39a66a4a98302aa591ee6d8b 564 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 402 540 1.4E-24 T 09-03-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RG43_RS07890 64ea4b5f39a66a4a98302aa591ee6d8b 564 Gene3D G3DSA:3.40.50.970 8 180 4.4E-51 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS07890 64ea4b5f39a66a4a98302aa591ee6d8b 564 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 10 178 1.3E-47 T 09-03-2017 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 RG43_RS07890 64ea4b5f39a66a4a98302aa591ee6d8b 564 SUPERFAMILY SSF52518 369 547 6.07E-40 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS07890 64ea4b5f39a66a4a98302aa591ee6d8b 564 Gene3D G3DSA:3.40.50.1220 195 337 8.0E-41 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain RG43_RS07890 64ea4b5f39a66a4a98302aa591ee6d8b 564 SUPERFAMILY SSF52467 195 353 6.34E-37 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain RG43_RS07890 64ea4b5f39a66a4a98302aa591ee6d8b 564 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 202 327 8.9E-33 T 09-03-2017 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 RG43_RS07890 64ea4b5f39a66a4a98302aa591ee6d8b 564 TIGRFAM TIGR03254 oxalate_oxc: oxalyl-CoA decarboxylase 6 559 0.0 T 09-03-2017 IPR017660 Oxalyl-CoA decarboxylase GO:0008949|GO:0030976|GO:0033611|GO:0046872 KEGG: 00630+4.1.1.8|MetaCyc: PWY-6695|MetaCyc: PWY-6696 RG43_RS07890 64ea4b5f39a66a4a98302aa591ee6d8b 564 Gene3D G3DSA:3.40.50.970 362 549 1.0E-51 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS07890 64ea4b5f39a66a4a98302aa591ee6d8b 564 SUPERFAMILY SSF52518 7 182 3.65E-48 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS15235 9a2508c16b43a7b2ad4c6f749a13e8aa 215 Gene3D G3DSA:1.10.10.10 3 87 1.3E-39 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS15235 9a2508c16b43a7b2ad4c6f749a13e8aa 215 Pfam PF04337 Protein of unknown function, DUF480 5 158 7.3E-64 T 09-03-2017 IPR007432 Protein of unknown function DUF480 RG43_RS15235 9a2508c16b43a7b2ad4c6f749a13e8aa 215 SUPERFAMILY SSF46785 2 84 1.68E-32 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS15235 9a2508c16b43a7b2ad4c6f749a13e8aa 215 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 211 34.739 T 09-03-2017 IPR007432 Protein of unknown function DUF480 RG43_RS15235 9a2508c16b43a7b2ad4c6f749a13e8aa 215 Gene3D G3DSA:1.10.10.10 95 172 1.1E-36 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS15235 9a2508c16b43a7b2ad4c6f749a13e8aa 215 SUPERFAMILY SSF46785 90 172 2.72E-29 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS00965 f482944325ae85c7e9a4624ec771d036 96 Gene3D G3DSA:1.10.260.40 37 88 1.0E-11 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS00965 f482944325ae85c7e9a4624ec771d036 96 SMART SM00530 37 91 9.5E-5 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RG43_RS00965 f482944325ae85c7e9a4624ec771d036 96 SUPERFAMILY SSF47413 38 82 3.22E-7 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS00965 f482944325ae85c7e9a4624ec771d036 96 Pfam PF01381 Helix-turn-helix 38 80 1.4E-5 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RG43_RS13735 c317a908d3a6324c71b48757bc316dc3 343 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 194 228 - T 09-03-2017 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 RG43_RS13735 c317a908d3a6324c71b48757bc316dc3 343 SUPERFAMILY SSF82861 80 160 2.09E-10 T 09-03-2017 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 RG43_RS13735 c317a908d3a6324c71b48757bc316dc3 343 SUPERFAMILY SSF50182 162 228 1.37E-17 T 09-03-2017 IPR010920 LSM domain RG43_RS13735 c317a908d3a6324c71b48757bc316dc3 343 Gene3D G3DSA:2.30.30.60 178 228 4.5E-15 T 09-03-2017 RG43_RS13735 c317a908d3a6324c71b48757bc316dc3 343 Gene3D G3DSA:3.30.70.100 233 321 2.7E-16 T 09-03-2017 RG43_RS13735 c317a908d3a6324c71b48757bc316dc3 343 SUPERFAMILY SSF82689 231 335 8.37E-22 T 09-03-2017 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 RG43_RS13735 c317a908d3a6324c71b48757bc316dc3 343 Pfam PF00924 Mechanosensitive ion channel 120 323 1.2E-63 T 09-03-2017 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 RG43_RS23730 3e8d6820e530ed2b2d2e9794bb156751 631 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 147 599 5.7E-225 T 09-03-2017 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 RG43_RS23730 3e8d6820e530ed2b2d2e9794bb156751 631 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 147 601 56.161 T 09-03-2017 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 RG43_RS23730 3e8d6820e530ed2b2d2e9794bb156751 631 Pfam PF13667 ThiC-associated domain 27 108 9.4E-33 T 09-03-2017 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 RG43_RS23730 3e8d6820e530ed2b2d2e9794bb156751 631 Pfam PF01964 Radical SAM ThiC family 148 596 1.5E-199 T 09-03-2017 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 RG43_RS07880 3d080a7b9b1e5e66ff97ae2ca4aacfa1 210 Pfam PF10938 YfdX protein 55 205 2.5E-46 T 09-03-2017 IPR021236 Uncharacterised protein family YfdX RG43_RS24780 26c37380d6b7a5bc969d70bec5d24d67 483 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 84 466 5.7E-129 T 09-03-2017 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 RG43_RS24780 26c37380d6b7a5bc969d70bec5d24d67 483 PIRSF PIRSF006247 1 483 2.2E-185 T 09-03-2017 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 RG43_RS24780 26c37380d6b7a5bc969d70bec5d24d67 483 Pfam PF02386 Cation transport protein 37 477 4.9E-93 T 09-03-2017 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 RG43_RS10815 fe1b14c88eee1debee777c19c3f0e1eb 495 SUPERFAMILY SSF51445 7 404 3.15E-88 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily RG43_RS10815 fe1b14c88eee1debee777c19c3f0e1eb 495 Gene3D G3DSA:3.20.20.80 2 406 4.5E-69 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RG43_RS10815 fe1b14c88eee1debee777c19c3f0e1eb 495 SUPERFAMILY SSF51011 405 491 1.03E-29 T 09-03-2017 RG43_RS10815 fe1b14c88eee1debee777c19c3f0e1eb 495 PIRSF PIRSF001021 1 494 7.5E-209 T 09-03-2017 IPR013776 Alpha-amylase, thermostable GO:0004553|GO:0005509|GO:0005975 KEGG: 00500+3.2.1.1 RG43_RS10815 fe1b14c88eee1debee777c19c3f0e1eb 495 Gene3D G3DSA:2.60.40.1180 408 491 6.0E-31 T 09-03-2017 IPR013780 Glycosyl hydrolase, all-beta RG43_RS10815 fe1b14c88eee1debee777c19c3f0e1eb 495 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 416 491 6.4E-6 T 09-03-2017 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 RG43_RS10815 fe1b14c88eee1debee777c19c3f0e1eb 495 Pfam PF00128 Alpha amylase, catalytic domain 28 367 9.4E-21 T 09-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RG43_RS10815 fe1b14c88eee1debee777c19c3f0e1eb 495 SMART SM00642 4 402 5.0E-60 T 09-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RG43_RS20425 689d88b686145dfa1ae813a2c0d2a774 240 Pfam PF08241 Methyltransferase domain 71 125 3.7E-11 T 09-03-2017 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 RG43_RS20425 689d88b686145dfa1ae813a2c0d2a774 240 Gene3D G3DSA:3.40.50.150 77 206 5.6E-19 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS20425 689d88b686145dfa1ae813a2c0d2a774 240 SUPERFAMILY SSF53335 77 203 3.96E-18 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS21935 5f0ca12173b5ed9b4b502a709573e196 410 SUPERFAMILY SSF103473 17 401 1.12E-46 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS21935 5f0ca12173b5ed9b4b502a709573e196 410 Pfam PF07690 Major Facilitator Superfamily 23 354 3.9E-32 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS21935 5f0ca12173b5ed9b4b502a709573e196 410 Gene3D G3DSA:1.20.1250.20 18 193 8.9E-24 T 09-03-2017 RG43_RS21935 5f0ca12173b5ed9b4b502a709573e196 410 Gene3D G3DSA:1.20.1250.20 214 408 6.2E-5 T 09-03-2017 RG43_RS21935 5f0ca12173b5ed9b4b502a709573e196 410 ProSitePatterns PS00216 Sugar transport proteins signature 1. 68 85 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RG43_RS18100 e9b407cd402ef39d77772a144291a64a 137 Gene3D G3DSA:3.10.129.10 1 136 1.7E-49 T 09-03-2017 IPR029069 HotDog domain RG43_RS18100 e9b407cd402ef39d77772a144291a64a 137 Hamap MF_00907 Proofreading thioesterase EntH [entH]. 1 137 53.774 T 09-03-2017 IPR026576 Proofreading thioesterase EntH GO:0009239|GO:0016790 RG43_RS18100 e9b407cd402ef39d77772a144291a64a 137 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 19 134 1.3E-47 T 09-03-2017 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-75105 RG43_RS18100 e9b407cd402ef39d77772a144291a64a 137 SUPERFAMILY SSF54637 1 136 2.86E-31 T 09-03-2017 IPR029069 HotDog domain RG43_RS18100 e9b407cd402ef39d77772a144291a64a 137 Pfam PF03061 Thioesterase superfamily 50 127 7.0E-17 T 09-03-2017 IPR006683 Thioesterase domain Reactome: R-HSA-75105 RG43_RS14035 8d2e41dbcc7d36ecc3d3a944fb7b8202 102 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 94 22.558 T 09-03-2017 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 RG43_RS14035 8d2e41dbcc7d36ecc3d3a944fb7b8202 102 Pfam PF06305 Protein of unknown function (DUF1049) 23 85 2.6E-21 T 09-03-2017 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 RG43_RS07375 8ca1e14741318e0bce0427464aa8f097 75 SUPERFAMILY SSF89447 1 59 3.03E-6 T 09-03-2017 RG43_RS07375 8ca1e14741318e0bce0427464aa8f097 75 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 7 52 6.8E-7 T 09-03-2017 IPR007159 SpoVT-AbrB domain GO:0003677 RG43_RS00585 58300ca4cc565fa46434bfa7aefb5e97 338 Gene3D G3DSA:3.90.550.10 30 300 1.7E-67 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS00585 58300ca4cc565fa46434bfa7aefb5e97 338 Pfam PF01501 Glycosyl transferase family 8 31 277 2.6E-69 T 09-03-2017 IPR002495 Glycosyl transferase, family 8 GO:0016757 RG43_RS00585 58300ca4cc565fa46434bfa7aefb5e97 338 Pfam PF08437 Glycosyl transferase family 8 C-terminal 279 335 3.0E-23 T 09-03-2017 IPR013645 Glycosyl transferase, family 8, C-terminal GO:0008918|GO:0009103 RG43_RS00585 58300ca4cc565fa46434bfa7aefb5e97 338 SUPERFAMILY SSF53448 31 300 4.78E-65 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS12390 44e2f12c68536cf070d148220513b9fb 215 Pfam PF00929 Exonuclease 20 194 3.3E-39 T 09-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III RG43_RS12390 44e2f12c68536cf070d148220513b9fb 215 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 208 6.5E-116 T 09-03-2017 IPR005987 Ribonuclease T GO:0004540|GO:0006396 RG43_RS12390 44e2f12c68536cf070d148220513b9fb 215 SMART SM00479 18 203 3.9E-42 T 09-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III RG43_RS12390 44e2f12c68536cf070d148220513b9fb 215 Gene3D G3DSA:3.30.420.10 12 209 2.8E-58 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS12390 44e2f12c68536cf070d148220513b9fb 215 Hamap MF_00157 Ribonuclease T [rnt]. 1 215 118.112 T 09-03-2017 IPR005987 Ribonuclease T GO:0004540|GO:0006396 RG43_RS12390 44e2f12c68536cf070d148220513b9fb 215 SUPERFAMILY SSF53098 13 207 1.08E-56 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS24105 ca63a4328404c8e6cbec8523b84f1d95 176 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 4.5E-87 T 09-03-2017 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 RG43_RS24105 ca63a4328404c8e6cbec8523b84f1d95 176 SUPERFAMILY SSF56235 2 172 1.08E-58 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal RG43_RS24105 ca63a4328404c8e6cbec8523b84f1d95 176 Pfam PF00227 Proteasome subunit 2 167 1.3E-23 T 09-03-2017 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5687128|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-983168 RG43_RS24105 ca63a4328404c8e6cbec8523b84f1d95 176 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 42.149 T 09-03-2017 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 RG43_RS24105 ca63a4328404c8e6cbec8523b84f1d95 176 Gene3D G3DSA:3.60.20.10 2 172 3.7E-85 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal RG43_RS24105 ca63a4328404c8e6cbec8523b84f1d95 176 PIRSF PIRSF039093 1 175 3.1E-88 T 09-03-2017 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 RG43_RS14895 8298de0c0cef9ebec11bfe5447380d15 378 Gene3D G3DSA:3.40.50.300 9 253 2.3E-81 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS14895 8298de0c0cef9ebec11bfe5447380d15 378 SMART SM00382 42 225 5.2E-17 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS14895 8298de0c0cef9ebec11bfe5447380d15 378 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 48 372 5.1E-169 T 09-03-2017 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 RG43_RS14895 8298de0c0cef9ebec11bfe5447380d15 378 SUPERFAMILY SSF50331 250 364 1.36E-7 T 09-03-2017 IPR008995 Molybdate/tungstate binding, C-terminal RG43_RS14895 8298de0c0cef9ebec11bfe5447380d15 378 Pfam PF00005 ABC transporter 35 174 3.1E-34 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS14895 8298de0c0cef9ebec11bfe5447380d15 378 Pfam PF08402 TOBE domain 292 372 2.2E-8 T 09-03-2017 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 RG43_RS14895 8298de0c0cef9ebec11bfe5447380d15 378 SUPERFAMILY SSF52540 17 258 3.08E-88 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS14895 8298de0c0cef9ebec11bfe5447380d15 378 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS01705 c3743f0681d3b0b94531fb6cc8318aaf 175 SUPERFAMILY SSF52540 4 172 2.93E-25 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS01705 c3743f0681d3b0b94531fb6cc8318aaf 175 Gene3D G3DSA:3.40.50.300 4 172 4.0E-70 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS01705 c3743f0681d3b0b94531fb6cc8318aaf 175 Pfam PF01202 Shikimate kinase 17 171 1.1E-11 T 09-03-2017 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 RG43_RS01705 c3743f0681d3b0b94531fb6cc8318aaf 175 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 11 173 6.2E-72 T 09-03-2017 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 RG43_RS22285 fad440e39d3e4aa424e4a0cdf07dbc10 712 Gene3D G3DSA:3.20.70.20 124 685 9.6E-190 T 09-03-2017 RG43_RS22285 fad440e39d3e4aa424e4a0cdf07dbc10 712 Pfam PF03477 ATP cone domain 4 89 2.9E-21 T 09-03-2017 IPR005144 ATP-cone domain Reactome: R-HSA-499943 RG43_RS22285 fad440e39d3e4aa424e4a0cdf07dbc10 712 ProSitePatterns PS00850 Glycine radical domain signature. 676 684 - T 09-03-2017 IPR019777 Formate C-acetyltransferase glycine radical, conserved site RG43_RS22285 fad440e39d3e4aa424e4a0cdf07dbc10 712 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 115 705 1.3E-213 T 09-03-2017 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 RG43_RS22285 fad440e39d3e4aa424e4a0cdf07dbc10 712 SUPERFAMILY SSF51998 121 687 2.26E-200 T 09-03-2017 RG43_RS22285 fad440e39d3e4aa424e4a0cdf07dbc10 712 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 116 705 4.8E-185 T 09-03-2017 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 RG43_RS11415 89fe64aee4f687517ea8987321af948d 91 Pfam PF07358 Protein of unknown function (DUF1482) 29 85 1.7E-34 T 09-03-2017 IPR009954 Protein of unknown function DUF1482 RG43_RS00975 fb0bb975dff34767ee1ed6fdf763a3e2 324 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 319 8.3E-31 T 09-03-2017 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 RG43_RS00975 fb0bb975dff34767ee1ed6fdf763a3e2 324 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 287 6.6E-62 T 09-03-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RG43_RS00975 fb0bb975dff34767ee1ed6fdf763a3e2 324 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 197 219 - T 09-03-2017 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RG43_RS00975 fb0bb975dff34767ee1ed6fdf763a3e2 324 SUPERFAMILY SSF51735 100 288 1.29E-57 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS00975 fb0bb975dff34767ee1ed6fdf763a3e2 324 SUPERFAMILY SSF52283 1 133 1.06E-28 T 09-03-2017 RG43_RS00975 fb0bb975dff34767ee1ed6fdf763a3e2 324 Hamap MF_01667 Glyoxylate/hydroxypyruvate reductase B [ghrB]. 1 324 75.737 T 09-03-2017 IPR023756 Glyoxylate/hydroxypyruvate reductase B GO:0016618|GO:0030267|GO:0055114 KEGG: 00260+1.1.1.81|KEGG: 00620+1.1.1.79|KEGG: 00630+1.1.1.79+1.1.1.81|MetaCyc: PWY-1622 RG43_RS00975 fb0bb975dff34767ee1ed6fdf763a3e2 324 Gene3D G3DSA:3.40.50.720 2 113 2.2E-31 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS00975 fb0bb975dff34767ee1ed6fdf763a3e2 324 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 226 242 - T 09-03-2017 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RG43_RS00975 fb0bb975dff34767ee1ed6fdf763a3e2 324 Gene3D G3DSA:3.40.50.720 114 287 2.7E-65 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS14530 1acea1fd8e0a35126912722cba9822e3 194 SUPERFAMILY SSF53178 3 192 8.11E-71 T 09-03-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RG43_RS14530 1acea1fd8e0a35126912722cba9822e3 194 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 16 29 - T 09-03-2017 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 RG43_RS14530 1acea1fd8e0a35126912722cba9822e3 194 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 3 182 36.382 T 09-03-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RG43_RS14530 1acea1fd8e0a35126912722cba9822e3 194 Pfam PF01195 Peptidyl-tRNA hydrolase 5 187 9.7E-54 T 09-03-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RG43_RS14530 1acea1fd8e0a35126912722cba9822e3 194 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 3 189 2.6E-74 T 09-03-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RG43_RS14530 1acea1fd8e0a35126912722cba9822e3 194 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 110 120 - T 09-03-2017 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 RG43_RS14530 1acea1fd8e0a35126912722cba9822e3 194 Gene3D G3DSA:3.40.50.1470 3 192 4.1E-72 T 09-03-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RG43_RS09650 2b1b02d2cd5ff1f606800d9a3b85f27b 227 SUPERFAMILY SSF56784 4 212 2.44E-18 T 09-03-2017 IPR023214 HAD-like domain RG43_RS09650 2b1b02d2cd5ff1f606800d9a3b85f27b 227 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 7 201 3.6E-20 T 09-03-2017 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 RG43_RS09650 2b1b02d2cd5ff1f606800d9a3b85f27b 227 Pfam PF12710 haloacid dehalogenase-like hydrolase 7 200 1.1E-18 T 09-03-2017 RG43_RS09650 2b1b02d2cd5ff1f606800d9a3b85f27b 227 Gene3D G3DSA:3.40.50.1000 87 210 1.5E-23 T 09-03-2017 IPR023214 HAD-like domain RG43_RS16165 2457f4abafd37feb90a801064461ee69 234 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 35 203 1.6E-70 T 09-03-2017 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 RG43_RS16165 2457f4abafd37feb90a801064461ee69 234 SUPERFAMILY SSF55729 2 228 1.17E-93 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS16165 2457f4abafd37feb90a801064461ee69 234 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 32 231 3.7E-95 T 09-03-2017 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 RG43_RS16165 2457f4abafd37feb90a801064461ee69 234 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 234 97.301 T 09-03-2017 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 RG43_RS16415 b87bbbdf42a11da101de37375d000619 252 SUPERFAMILY SSF100950 74 236 8.16E-31 T 09-03-2017 RG43_RS16415 b87bbbdf42a11da101de37375d000619 252 SMART SM00420 8 57 7.0E-15 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RG43_RS16415 b87bbbdf42a11da101de37375d000619 252 Gene3D G3DSA:3.40.50.1360 77 215 4.5E-9 T 09-03-2017 RG43_RS16415 b87bbbdf42a11da101de37375d000619 252 Gene3D G3DSA:1.10.10.10 3 43 1.1E-4 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS16415 b87bbbdf42a11da101de37375d000619 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 09-03-2017 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 RG43_RS16415 b87bbbdf42a11da101de37375d000619 252 SMART SM01134 73 234 8.4E-57 T 09-03-2017 RG43_RS16415 b87bbbdf42a11da101de37375d000619 252 Pfam PF08220 DeoR-like helix-turn-helix domain 8 59 9.7E-15 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RG43_RS16415 b87bbbdf42a11da101de37375d000619 252 Pfam PF00455 DeoR C terminal sensor domain 76 232 1.1E-45 T 09-03-2017 IPR014036 DeoR C-terminal sensor domain RG43_RS15170 67fb099c2e90e37fdbfe05d9d8b550b2 365 PRINTS PR01010 Flagellar P-ring protein signature 161 179 7.8E-94 T 09-03-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 RG43_RS15170 67fb099c2e90e37fdbfe05d9d8b550b2 365 PRINTS PR01010 Flagellar P-ring protein signature 36 51 7.8E-94 T 09-03-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 RG43_RS15170 67fb099c2e90e37fdbfe05d9d8b550b2 365 PRINTS PR01010 Flagellar P-ring protein signature 21 36 7.8E-94 T 09-03-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 RG43_RS15170 67fb099c2e90e37fdbfe05d9d8b550b2 365 PRINTS PR01010 Flagellar P-ring protein signature 251 263 7.8E-94 T 09-03-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 RG43_RS15170 67fb099c2e90e37fdbfe05d9d8b550b2 365 PRINTS PR01010 Flagellar P-ring protein signature 121 139 7.8E-94 T 09-03-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 RG43_RS15170 67fb099c2e90e37fdbfe05d9d8b550b2 365 PRINTS PR01010 Flagellar P-ring protein signature 82 101 7.8E-94 T 09-03-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 RG43_RS15170 67fb099c2e90e37fdbfe05d9d8b550b2 365 PRINTS PR01010 Flagellar P-ring protein signature 187 205 7.8E-94 T 09-03-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 RG43_RS15170 67fb099c2e90e37fdbfe05d9d8b550b2 365 PRINTS PR01010 Flagellar P-ring protein signature 56 71 7.8E-94 T 09-03-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 RG43_RS15170 67fb099c2e90e37fdbfe05d9d8b550b2 365 PRINTS PR01010 Flagellar P-ring protein signature 104 121 7.8E-94 T 09-03-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 RG43_RS15170 67fb099c2e90e37fdbfe05d9d8b550b2 365 Pfam PF02119 Flagellar P-ring protein 21 364 6.0E-138 T 09-03-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 RG43_RS15170 67fb099c2e90e37fdbfe05d9d8b550b2 365 Hamap MF_00416 Flagellar P-ring protein [flgI]. 4 365 40.239 T 09-03-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 RG43_RS02835 b07f5eb7a050c52d00c36de294a6ba3f 212 Pfam PF00043 Glutathione S-transferase, C-terminal domain 102 194 1.7E-13 T 09-03-2017 IPR004046 Glutathione S-transferase, C-terminal RG43_RS02835 b07f5eb7a050c52d00c36de294a6ba3f 212 Gene3D G3DSA:3.40.30.10 7 101 1.8E-29 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS02835 b07f5eb7a050c52d00c36de294a6ba3f 212 Pfam PF02798 Glutathione S-transferase, N-terminal domain 10 81 5.5E-20 T 09-03-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RG43_RS02835 b07f5eb7a050c52d00c36de294a6ba3f 212 SUPERFAMILY SSF47616 82 208 1.42E-27 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like RG43_RS02835 b07f5eb7a050c52d00c36de294a6ba3f 212 Gene3D G3DSA:1.20.1050.10 102 208 1.3E-17 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like RG43_RS02835 b07f5eb7a050c52d00c36de294a6ba3f 212 SUPERFAMILY SSF52833 7 90 2.76E-23 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS26020 723373148f344b4086794700cf9f8a78 95 SUPERFAMILY SSF143011 1 82 7.19E-23 T 09-03-2017 RG43_RS26020 723373148f344b4086794700cf9f8a78 95 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 5 86 3.1E-9 T 09-03-2017 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family RG43_RS26020 723373148f344b4086794700cf9f8a78 95 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 83 8.0E-14 T 09-03-2017 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family RG43_RS18125 57a975e47ae93ec09cc9a8ac21dc7ebe 318 SUPERFAMILY SSF53807 31 317 4.71E-50 T 09-03-2017 RG43_RS18125 57a975e47ae93ec09cc9a8ac21dc7ebe 318 Gene3D G3DSA:3.40.50.1980 158 318 1.1E-44 T 09-03-2017 RG43_RS18125 57a975e47ae93ec09cc9a8ac21dc7ebe 318 Gene3D G3DSA:3.40.50.1980 29 157 7.9E-26 T 09-03-2017 RG43_RS18125 57a975e47ae93ec09cc9a8ac21dc7ebe 318 Pfam PF01497 Periplasmic binding protein 49 297 3.3E-32 T 09-03-2017 IPR002491 ABC transporter periplasmic binding domain GO:0005488 RG43_RS24035 f5bc8551f1c30af54664b6773efcb11d 296 SUPERFAMILY SSF51730 22 294 2.75E-97 T 09-03-2017 IPR029041 FAD-linked oxidoreductase-like RG43_RS24035 f5bc8551f1c30af54664b6773efcb11d 296 Pfam PF02219 Methylenetetrahydrofolate reductase 16 291 2.2E-108 T 09-03-2017 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 RG43_RS24035 f5bc8551f1c30af54664b6773efcb11d 296 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 25 290 2.9E-106 T 09-03-2017 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 RG43_RS24035 f5bc8551f1c30af54664b6773efcb11d 296 Gene3D G3DSA:3.20.20.220 13 293 1.8E-108 T 09-03-2017 IPR029041 FAD-linked oxidoreductase-like RG43_RS20590 009b981acb9ddf0a9dd6996be35184c1 382 Gene3D G3DSA:3.40.50.2000 172 358 6.6E-6 T 09-03-2017 RG43_RS20590 009b981acb9ddf0a9dd6996be35184c1 382 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 6 382 43.644 T 09-03-2017 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 RG43_RS20590 009b981acb9ddf0a9dd6996be35184c1 382 SUPERFAMILY SSF53756 9 361 4.71E-29 T 09-03-2017 RG43_RS20590 009b981acb9ddf0a9dd6996be35184c1 382 Pfam PF02684 Lipid-A-disaccharide synthetase 9 377 1.9E-156 T 09-03-2017 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 RG43_RS20590 009b981acb9ddf0a9dd6996be35184c1 382 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 1 380 3.2E-191 T 09-03-2017 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 RG43_RS06880 a54b8e4c2fafdbc49fb848c0b3564b5f 324 Gene3D G3DSA:2.170.230.10 155 263 8.8E-49 T 09-03-2017 IPR019766 Peptidase S26A, all-beta subdomain RG43_RS06880 a54b8e4c2fafdbc49fb848c0b3564b5f 324 Pfam PF00717 Peptidase S24-like 86 160 1.2E-20 T 09-03-2017 IPR019759 Peptidase S24/S26A/S26B RG43_RS06880 a54b8e4c2fafdbc49fb848c0b3564b5f 324 ProSitePatterns PS00501 Signal peptidases I serine active site. 89 96 - T 09-03-2017 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 RG43_RS06880 a54b8e4c2fafdbc49fb848c0b3564b5f 324 ProSitePatterns PS00760 Signal peptidases I lysine active site. 146 158 - T 09-03-2017 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 RG43_RS06880 a54b8e4c2fafdbc49fb848c0b3564b5f 324 Gene3D G3DSA:2.10.109.10 264 309 7.2E-57 T 09-03-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain RG43_RS06880 a54b8e4c2fafdbc49fb848c0b3564b5f 324 Gene3D G3DSA:2.10.109.10 76 154 7.2E-57 T 09-03-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain RG43_RS06880 a54b8e4c2fafdbc49fb848c0b3564b5f 324 SUPERFAMILY SSF51306 78 323 1.33E-84 T 09-03-2017 IPR015927 Peptidase S24/S26A/S26B/S26C RG43_RS06880 a54b8e4c2fafdbc49fb848c0b3564b5f 324 Pfam PF10502 Signal peptidase, peptidase S26 261 302 2.5E-7 T 09-03-2017 IPR019533 Peptidase S26 RG43_RS06880 a54b8e4c2fafdbc49fb848c0b3564b5f 324 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 66 305 4.1E-43 T 09-03-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RG43_RS06880 a54b8e4c2fafdbc49fb848c0b3564b5f 324 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 144 156 2.9E-25 T 09-03-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RG43_RS06880 a54b8e4c2fafdbc49fb848c0b3564b5f 324 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 80 96 2.9E-25 T 09-03-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RG43_RS06880 a54b8e4c2fafdbc49fb848c0b3564b5f 324 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 264 283 2.9E-25 T 09-03-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RG43_RS06880 a54b8e4c2fafdbc49fb848c0b3564b5f 324 ProSitePatterns PS00761 Signal peptidases I signature 3. 269 282 - T 09-03-2017 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 RG43_RS17030 c11b0af3e388d1b04283d96e19af7f61 299 TIGRFAM TIGR01610 phage_O_Nterm: phage replication protein O, N-terminal domain 23 115 2.3E-39 T 09-03-2017 IPR006497 Bacteriophage lambda, GpO, N-terminal GO:0006260 RG43_RS17030 c11b0af3e388d1b04283d96e19af7f61 299 Pfam PF04492 Bacteriophage replication protein O 22 115 2.7E-33 T 09-03-2017 IPR006497 Bacteriophage lambda, GpO, N-terminal GO:0006260 RG43_RS20815 a5870c43f5fdfb0a7999895596d62aa1 866 Pfam PF13953 PapC C-terminal domain 781 844 2.7E-15 T 09-03-2017 IPR025949 PapC-like, C-terminal domain RG43_RS20815 a5870c43f5fdfb0a7999895596d62aa1 866 SUPERFAMILY SSF141729 34 160 1.96E-30 T 09-03-2017 RG43_RS20815 a5870c43f5fdfb0a7999895596d62aa1 866 Pfam PF00577 Outer membrane usher protein 200 772 2.5E-159 T 09-03-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 RG43_RS20815 a5870c43f5fdfb0a7999895596d62aa1 866 Pfam PF13954 PapC N-terminal domain 35 186 1.4E-42 T 09-03-2017 IPR025885 PapC, N-terminal domain GO:0005515 RG43_RS20815 a5870c43f5fdfb0a7999895596d62aa1 866 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 312 322 - T 09-03-2017 IPR018030 Fimbrial membrane usher, conserved site RG43_RS18495 80966b2a5555e0131c71e79e07022fea 152 Pfam PF01957 NfeD-like C-terminal, partner-binding 13 148 7.2E-24 T 09-03-2017 IPR002810 NfeD-like, C-terminal domain RG43_RS18495 80966b2a5555e0131c71e79e07022fea 152 Gene3D G3DSA:1.20.1250.20 34 84 8.0E-4 T 09-03-2017 RG43_RS18495 80966b2a5555e0131c71e79e07022fea 152 SUPERFAMILY SSF141322 95 149 2.75E-5 T 09-03-2017 RG43_RS18495 80966b2a5555e0131c71e79e07022fea 152 Gene3D G3DSA:2.40.50.140 94 148 3.9E-11 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS03340 7fc82bb2a87af639adc6313eb10fa614 256 TIGRFAM TIGR03239 GarL: 2-dehydro-3-deoxyglucarate aldolase 8 256 5.9E-149 T 09-03-2017 IPR017648 5-keto-4-deoxy-D-glucarate aldolase GO:0008672|GO:0019394 KEGG: 00053+4.1.2.20 RG43_RS03340 7fc82bb2a87af639adc6313eb10fa614 256 SUPERFAMILY SSF51621 4 255 1.6E-82 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RG43_RS03340 7fc82bb2a87af639adc6313eb10fa614 256 Gene3D G3DSA:3.20.20.60 6 255 1.8E-79 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RG43_RS03340 7fc82bb2a87af639adc6313eb10fa614 256 Hamap MF_01291 5-keto-4-deoxy-D-glucarate aldolase [garL]. 1 256 69.085 T 09-03-2017 IPR017648 5-keto-4-deoxy-D-glucarate aldolase GO:0008672|GO:0019394 KEGG: 00053+4.1.2.20 RG43_RS03340 7fc82bb2a87af639adc6313eb10fa614 256 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 20 245 3.7E-63 T 09-03-2017 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 RG43_RS09005 c004b46ac0d958685cc3dfd0e52110c7 349 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 14 348 1.8E-171 T 09-03-2017 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 RG43_RS09005 c004b46ac0d958685cc3dfd0e52110c7 349 Pfam PF03601 Conserved hypothetical protein 698 18 326 1.3E-117 T 09-03-2017 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 RG43_RS22295 0f688f8597bcd4a5ea7208bedf04c11c 128 SUPERFAMILY SSF47175 23 128 1.83E-35 T 09-03-2017 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 RG43_RS22295 0f688f8597bcd4a5ea7208bedf04c11c 128 Gene3D G3DSA:1.20.120.10 23 128 1.8E-46 T 09-03-2017 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 RG43_RS22295 0f688f8597bcd4a5ea7208bedf04c11c 128 PIRSF PIRSF000029 1 128 5.8E-64 T 09-03-2017 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 RG43_RS22295 0f688f8597bcd4a5ea7208bedf04c11c 128 Pfam PF07361 Cytochrome b562 24 128 2.1E-32 T 09-03-2017 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 RG43_RS16590 91e1fc09c4c0571f784e7272bf3d625a 248 SMART SM00079 26 245 1.3E-7 T 09-03-2017 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 RG43_RS16590 91e1fc09c4c0571f784e7272bf3d625a 248 SMART SM00062 26 246 5.7E-74 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RG43_RS16590 91e1fc09c4c0571f784e7272bf3d625a 248 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 48 61 - T 09-03-2017 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 RG43_RS16590 91e1fc09c4c0571f784e7272bf3d625a 248 Gene3D G3DSA:3.40.190.10 24 102 2.8E-48 T 09-03-2017 RG43_RS16590 91e1fc09c4c0571f784e7272bf3d625a 248 Gene3D G3DSA:3.40.190.10 207 246 2.8E-48 T 09-03-2017 RG43_RS16590 91e1fc09c4c0571f784e7272bf3d625a 248 Gene3D G3DSA:3.40.190.10 103 206 8.8E-33 T 09-03-2017 RG43_RS16590 91e1fc09c4c0571f784e7272bf3d625a 248 SUPERFAMILY SSF53850 7 245 8.25E-75 T 09-03-2017 RG43_RS16590 91e1fc09c4c0571f784e7272bf3d625a 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 244 1.1E-70 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RG43_RS16985 e474d6a4056ba8e81b16a89fca954676 46 ProDom PD026569 PROPHAGE GIFSY-1 3'REGION ORF45 C1558 RUSA LAMBDOID YLCG DLP12 2 46 6.0E-20 T 09-03-2017 RG43_RS19295 ac891e42edb21ac1a03d93a8d72d8ee6 156 SUPERFAMILY SSF55234 88 155 2.09E-29 T 09-03-2017 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 RG43_RS19295 ac891e42edb21ac1a03d93a8d72d8ee6 156 Pfam PF02560 Cyanate lyase C-terminal domain 87 154 3.9E-32 T 09-03-2017 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 RG43_RS19295 ac891e42edb21ac1a03d93a8d72d8ee6 156 Gene3D G3DSA:3.30.1160.10 89 156 4.6E-36 T 09-03-2017 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 RG43_RS19295 ac891e42edb21ac1a03d93a8d72d8ee6 156 TIGRFAM TIGR00673 cynS: cyanase 1 156 2.5E-73 T 09-03-2017 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 RG43_RS19295 ac891e42edb21ac1a03d93a8d72d8ee6 156 SUPERFAMILY SSF47413 1 85 1.21E-20 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS19295 ac891e42edb21ac1a03d93a8d72d8ee6 156 PRINTS PR01693 Cyanase signature 91 105 1.1E-35 T 09-03-2017 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 RG43_RS19295 ac891e42edb21ac1a03d93a8d72d8ee6 156 PRINTS PR01693 Cyanase signature 109 125 1.1E-35 T 09-03-2017 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 RG43_RS19295 ac891e42edb21ac1a03d93a8d72d8ee6 156 PRINTS PR01693 Cyanase signature 141 151 1.1E-35 T 09-03-2017 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 RG43_RS19295 ac891e42edb21ac1a03d93a8d72d8ee6 156 PRINTS PR01693 Cyanase signature 42 59 1.1E-35 T 09-03-2017 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 RG43_RS19295 ac891e42edb21ac1a03d93a8d72d8ee6 156 PRINTS PR01693 Cyanase signature 22 37 1.1E-35 T 09-03-2017 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 RG43_RS19295 ac891e42edb21ac1a03d93a8d72d8ee6 156 SMART SM01116 83 156 6.1E-45 T 09-03-2017 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 RG43_RS19295 ac891e42edb21ac1a03d93a8d72d8ee6 156 Hamap MF_00535 Cyanate hydratase [cynS]. 1 156 75.12 T 09-03-2017 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 RG43_RS19295 ac891e42edb21ac1a03d93a8d72d8ee6 156 Gene3D G3DSA:1.10.260.40 1 86 1.7E-29 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS19295 ac891e42edb21ac1a03d93a8d72d8ee6 156 PIRSF PIRSF001263 3 156 1.3E-67 T 09-03-2017 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 RG43_RS19440 daf38516bb2e8163c258aafb6e715c60 310 SUPERFAMILY SSF53850 91 293 4.34E-19 T 09-03-2017 RG43_RS19440 daf38516bb2e8163c258aafb6e715c60 310 SUPERFAMILY SSF46785 8 91 6.24E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS19440 daf38516bb2e8163c258aafb6e715c60 310 Gene3D G3DSA:3.40.190.10 107 182 2.2E-6 T 09-03-2017 RG43_RS19440 daf38516bb2e8163c258aafb6e715c60 310 Gene3D G3DSA:3.40.190.10 183 259 8.7E-4 T 09-03-2017 RG43_RS19440 daf38516bb2e8163c258aafb6e715c60 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 4.2E-17 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS19440 daf38516bb2e8163c258aafb6e715c60 310 Gene3D G3DSA:1.10.10.10 9 89 9.8E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS19440 daf38516bb2e8163c258aafb6e715c60 310 Pfam PF03466 LysR substrate binding domain 91 280 1.2E-19 T 09-03-2017 IPR005119 LysR, substrate-binding RG43_RS21500 13f3c35a9df55b8e0032f2564af2a00c 317 Gene3D G3DSA:3.20.20.70 3 315 1.9E-134 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS21500 13f3c35a9df55b8e0032f2564af2a00c 317 Hamap MF_00492 Transaldolase [tal]. 2 317 52.598 T 09-03-2017 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 RG43_RS21500 13f3c35a9df55b8e0032f2564af2a00c 317 TIGRFAM TIGR00874 talAB: transaldolase 4 316 1.5E-167 T 09-03-2017 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 RG43_RS21500 13f3c35a9df55b8e0032f2564af2a00c 317 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 09-03-2017 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 RG43_RS21500 13f3c35a9df55b8e0032f2564af2a00c 317 SUPERFAMILY SSF51569 1 316 5.05E-118 T 09-03-2017 RG43_RS21500 13f3c35a9df55b8e0032f2564af2a00c 317 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 09-03-2017 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 RG43_RS21500 13f3c35a9df55b8e0032f2564af2a00c 317 Pfam PF00923 Transaldolase 14 313 7.1E-103 T 09-03-2017 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 RG43_RS09225 23c2ef605f145aad563e2c1360351898 362 SMART SM00382 75 230 2.5E-4 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS09225 23c2ef605f145aad563e2c1360351898 362 SUPERFAMILY SSF52540 56 333 4.79E-23 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS09225 23c2ef605f145aad563e2c1360351898 362 Pfam PF07728 AAA domain (dynein-related subfamily) 79 220 3.7E-33 T 09-03-2017 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 RG43_RS09225 23c2ef605f145aad563e2c1360351898 362 Gene3D G3DSA:3.40.50.300 65 236 3.1E-19 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS21510 4575c30f00de3a47f4bb61ef72e36ac9 258 Pfam PF03883 Protein of unknown function (DUF328) 1 243 1.6E-91 T 09-03-2017 IPR005583 Peroxide stress protein YaaA RG43_RS21510 4575c30f00de3a47f4bb61ef72e36ac9 258 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 38.399 T 09-03-2017 IPR005583 Peroxide stress protein YaaA RG43_RS01690 d64ae5a8785cc521063d1cd1cab2ffc8 345 Gene3D G3DSA:3.30.360.10 146 336 3.3E-27 T 09-03-2017 RG43_RS01690 d64ae5a8785cc521063d1cd1cab2ffc8 345 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 120 7.9E-28 T 09-03-2017 IPR000683 Oxidoreductase, N-terminal GO:0016491 RG43_RS01690 d64ae5a8785cc521063d1cd1cab2ffc8 345 SUPERFAMILY SSF55347 130 271 1.55E-20 T 09-03-2017 RG43_RS01690 d64ae5a8785cc521063d1cd1cab2ffc8 345 SUPERFAMILY SSF51735 3 158 1.4E-44 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS01690 d64ae5a8785cc521063d1cd1cab2ffc8 345 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 239 4.2E-16 T 09-03-2017 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 RG43_RS01690 d64ae5a8785cc521063d1cd1cab2ffc8 345 Gene3D G3DSA:3.40.50.720 3 145 4.7E-42 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS13740 950dcc99a642b59c26d7f6d648728313 537 SUPERFAMILY SSF53850 32 528 2.46E-139 T 09-03-2017 RG43_RS13740 950dcc99a642b59c26d7f6d648728313 537 PIRSF PIRSF002741 2 537 6.5E-112 T 09-03-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RG43_RS13740 950dcc99a642b59c26d7f6d648728313 537 Gene3D G3DSA:3.10.105.10 291 505 3.3E-64 T 09-03-2017 RG43_RS13740 950dcc99a642b59c26d7f6d648728313 537 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 77 453 4.0E-87 T 09-03-2017 IPR000914 Solute-binding protein family 5 domain RG43_RS13740 950dcc99a642b59c26d7f6d648728313 537 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 83 104 - T 09-03-2017 IPR023765 Solute-binding protein family 5, conserved site RG43_RS13740 950dcc99a642b59c26d7f6d648728313 537 Gene3D G3DSA:3.90.76.10 44 216 5.8E-48 T 09-03-2017 RG43_RS02145 c89fc73ed2c2de592a61ca3a65a4ddcd 187 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 6.1E-6 T 09-03-2017 RG43_RS02145 c89fc73ed2c2de592a61ca3a65a4ddcd 187 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 6.1E-6 T 09-03-2017 RG43_RS02145 c89fc73ed2c2de592a61ca3a65a4ddcd 187 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 187 4.3E-99 T 09-03-2017 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 RG43_RS02145 c89fc73ed2c2de592a61ca3a65a4ddcd 187 Gene3D G3DSA:3.40.50.880 1 186 1.2E-69 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like RG43_RS02145 c89fc73ed2c2de592a61ca3a65a4ddcd 187 SUPERFAMILY SSF52317 1 186 1.07E-57 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like RG43_RS02145 c89fc73ed2c2de592a61ca3a65a4ddcd 187 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 6.9E-14 T 09-03-2017 RG43_RS02145 c89fc73ed2c2de592a61ca3a65a4ddcd 187 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 6.9E-14 T 09-03-2017 RG43_RS02145 c89fc73ed2c2de592a61ca3a65a4ddcd 187 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 6.9E-14 T 09-03-2017 RG43_RS02145 c89fc73ed2c2de592a61ca3a65a4ddcd 187 PRINTS PR00097 Anthranilate synthase component II signature 47 56 1.8E-37 T 09-03-2017 RG43_RS02145 c89fc73ed2c2de592a61ca3a65a4ddcd 187 PRINTS PR00097 Anthranilate synthase component II signature 119 131 1.8E-37 T 09-03-2017 RG43_RS02145 c89fc73ed2c2de592a61ca3a65a4ddcd 187 PRINTS PR00097 Anthranilate synthase component II signature 164 177 1.8E-37 T 09-03-2017 RG43_RS02145 c89fc73ed2c2de592a61ca3a65a4ddcd 187 PRINTS PR00097 Anthranilate synthase component II signature 2 16 1.8E-37 T 09-03-2017 RG43_RS02145 c89fc73ed2c2de592a61ca3a65a4ddcd 187 PRINTS PR00097 Anthranilate synthase component II signature 74 85 1.8E-37 T 09-03-2017 RG43_RS02145 c89fc73ed2c2de592a61ca3a65a4ddcd 187 PRINTS PR00097 Anthranilate synthase component II signature 99 107 1.8E-37 T 09-03-2017 RG43_RS02145 c89fc73ed2c2de592a61ca3a65a4ddcd 187 Pfam PF00117 Glutamine amidotransferase class-I 3 186 2.4E-57 T 09-03-2017 IPR017926 Glutamine amidotransferase RG43_RS25215 b63e4245d160fcc7f6b7312b4a6d5e51 348 Gene3D G3DSA:3.30.1890.10 54 221 1.4E-93 T 09-03-2017 RG43_RS25215 b63e4245d160fcc7f6b7312b4a6d5e51 348 Gene3D G3DSA:3.30.1890.10 257 318 1.4E-93 T 09-03-2017 RG43_RS25215 b63e4245d160fcc7f6b7312b4a6d5e51 348 Hamap MF_02025 ECA polysaccharide chain length modulation protein [wzzE]. 8 347 57.637 T 09-03-2017 IPR032895 ECA polysaccharide chain length modulation protein WzzE GO:0009246|GO:0016021 RG43_RS25215 b63e4245d160fcc7f6b7312b4a6d5e51 348 SUPERFAMILY SSF160355 54 318 7.59E-88 T 09-03-2017 RG43_RS25215 b63e4245d160fcc7f6b7312b4a6d5e51 348 Pfam PF02706 Chain length determinant protein 15 180 1.2E-14 T 09-03-2017 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 RG43_RS05500 f41308d630a1856fc245c85cd236fcee 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.2E-16 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS05500 f41308d630a1856fc245c85cd236fcee 311 Gene3D G3DSA:3.40.190.10 93 179 1.3E-16 T 09-03-2017 RG43_RS05500 f41308d630a1856fc245c85cd236fcee 311 SUPERFAMILY SSF46785 4 114 2.81E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS05500 f41308d630a1856fc245c85cd236fcee 311 SUPERFAMILY SSF53850 93 294 9.77E-44 T 09-03-2017 RG43_RS05500 f41308d630a1856fc245c85cd236fcee 311 Gene3D G3DSA:1.10.10.10 5 89 2.0E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS05500 f41308d630a1856fc245c85cd236fcee 311 Gene3D G3DSA:3.40.190.10 180 262 1.5E-22 T 09-03-2017 RG43_RS05500 f41308d630a1856fc245c85cd236fcee 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.5E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS05500 f41308d630a1856fc245c85cd236fcee 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.5E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS05500 f41308d630a1856fc245c85cd236fcee 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.5E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS05500 f41308d630a1856fc245c85cd236fcee 311 Pfam PF03466 LysR substrate binding domain 92 293 3.6E-43 T 09-03-2017 IPR005119 LysR, substrate-binding RG43_RS20335 d307dbf8ab74b8cbc04cd8131342be5a 73 ProDom PD056719 YEET C0272 C4574 AEC74 ECS1404 C1284 INTERGENIC-REGION YKFH YPJJ 10 73 3.0E-33 T 09-03-2017 IPR009329 Protein of unknown function DUF987 RG43_RS20335 d307dbf8ab74b8cbc04cd8131342be5a 73 Pfam PF06174 Protein of unknown function (DUF987) 1 65 3.9E-37 T 09-03-2017 IPR009329 Protein of unknown function DUF987 RG43_RS24080 6046f21be98e2b9bed596d454a4eec48 202 SUPERFAMILY SSF54001 19 195 9.42E-51 T 09-03-2017 RG43_RS24080 6046f21be98e2b9bed596d454a4eec48 202 Gene3D G3DSA:2.30.30.330 19 197 6.1E-63 T 09-03-2017 RG43_RS24080 6046f21be98e2b9bed596d454a4eec48 202 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 21 193 1.1E-52 T 09-03-2017 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family RG43_RS06105 e2b987a10d0bacc61f47994a9bbc71b2 107 ProDom PD070788 MEMBRANE OXIDASE SUBUNIT CYTOCHROME YGBE INNER STY3057 TRANSMEMBRANE 6 107 3.0E-52 T 09-03-2017 IPR022721 Protein of unknown function DUF3561 RG43_RS06105 e2b987a10d0bacc61f47994a9bbc71b2 107 Pfam PF12084 Protein of unknown function (DUF3561) 1 107 6.0E-48 T 09-03-2017 IPR022721 Protein of unknown function DUF3561 RG43_RS21325 efb4e41cf366de96bcf8cf65f4624b1d 620 Pfam PF00999 Sodium/hydrogen exchanger family 11 374 8.2E-62 T 09-03-2017 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 RG43_RS21325 efb4e41cf366de96bcf8cf65f4624b1d 620 PRINTS PR00335 TrkA potassium uptake protein signature 458 468 2.0E-8 T 09-03-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 RG43_RS21325 efb4e41cf366de96bcf8cf65f4624b1d 620 PRINTS PR00335 TrkA potassium uptake protein signature 418 432 2.0E-8 T 09-03-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 RG43_RS21325 efb4e41cf366de96bcf8cf65f4624b1d 620 PRINTS PR00335 TrkA potassium uptake protein signature 401 415 2.0E-8 T 09-03-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 RG43_RS21325 efb4e41cf366de96bcf8cf65f4624b1d 620 PRINTS PR00335 TrkA potassium uptake protein signature 447 457 2.0E-8 T 09-03-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 RG43_RS21325 efb4e41cf366de96bcf8cf65f4624b1d 620 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 285 1.0E-93 T 09-03-2017 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 RG43_RS21325 efb4e41cf366de96bcf8cf65f4624b1d 620 Hamap MF_01413 Glutathione-regulated potassium-efflux system protein KefC [kefC]. 1 607 55.551 T 09-03-2017 IPR023941 Glutathione-regulated potassium-efflux system protein KefC GO:0005887|GO:0006813|GO:0015503|GO:0015643|GO:0019899|GO:0051595 RG43_RS21325 efb4e41cf366de96bcf8cf65f4624b1d 620 Gene3D G3DSA:3.40.50.720 395 530 2.4E-36 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS21325 efb4e41cf366de96bcf8cf65f4624b1d 620 Pfam PF02254 TrkA-N domain 402 512 3.5E-26 T 09-03-2017 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 RG43_RS21325 efb4e41cf366de96bcf8cf65f4624b1d 620 SUPERFAMILY SSF51735 401 530 1.05E-33 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS12875 6f749eb022a676f64f3d6c1a46e2c37a 144 Gene3D G3DSA:1.10.10.10 13 142 9.5E-36 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS12875 6f749eb022a676f64f3d6c1a46e2c37a 144 ProSitePatterns PS01117 MarR-type HTH domain signature. 70 104 - T 09-03-2017 IPR023187 Transcriptional regulator MarR-type, conserved site RG43_RS12875 6f749eb022a676f64f3d6c1a46e2c37a 144 SUPERFAMILY SSF46785 5 143 2.73E-30 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS12875 6f749eb022a676f64f3d6c1a46e2c37a 144 Pfam PF01047 MarR family 38 96 4.1E-18 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RG43_RS12875 6f749eb022a676f64f3d6c1a46e2c37a 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 3.2E-25 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RG43_RS12875 6f749eb022a676f64f3d6c1a46e2c37a 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 122 142 3.2E-25 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RG43_RS12875 6f749eb022a676f64f3d6c1a46e2c37a 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 3.2E-25 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RG43_RS12875 6f749eb022a676f64f3d6c1a46e2c37a 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 55 71 3.2E-25 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RG43_RS12875 6f749eb022a676f64f3d6c1a46e2c37a 144 SMART SM00347 31 132 3.9E-34 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RG43_RS00720 acf1c175b982a03ecd877fb3c8e5bb5b 120 Pfam PF10928 Protein of unknown function (DUF2810) 66 117 5.9E-33 T 09-03-2017 IPR021230 Protein of unknown function DUF2810 RG43_RS22720 9ff5eaf3b5e90373d264af3cbbf03243 350 Pfam PF03193 Protein of unknown function, DUF258 100 276 4.6E-57 T 09-03-2017 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 RG43_RS22720 9ff5eaf3b5e90373d264af3cbbf03243 350 Gene3D G3DSA:3.40.50.300 115 275 2.3E-49 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS22720 9ff5eaf3b5e90373d264af3cbbf03243 350 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 40 340 37.989 T 09-03-2017 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 RG43_RS22720 9ff5eaf3b5e90373d264af3cbbf03243 350 Gene3D G3DSA:1.10.40.50 276 345 5.5E-26 T 09-03-2017 RG43_RS22720 9ff5eaf3b5e90373d264af3cbbf03243 350 SUPERFAMILY SSF52540 114 340 5.55E-59 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS22720 9ff5eaf3b5e90373d264af3cbbf03243 350 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 73 334 1.4E-101 T 09-03-2017 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 RG43_RS05985 26564a10044085dcb60b7d93b1e94cbc 469 Gene3D G3DSA:1.20.1250.20 46 225 1.1E-27 T 09-03-2017 RG43_RS05985 26564a10044085dcb60b7d93b1e94cbc 469 SUPERFAMILY SSF103473 32 452 4.32E-69 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS05985 26564a10044085dcb60b7d93b1e94cbc 469 Gene3D G3DSA:1.20.1250.20 270 449 3.9E-15 T 09-03-2017 RG43_RS05985 26564a10044085dcb60b7d93b1e94cbc 469 ProSitePatterns PS00217 Sugar transport proteins signature 2. 140 165 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RG43_RS05985 26564a10044085dcb60b7d93b1e94cbc 469 Pfam PF00083 Sugar (and other) transporter 53 453 1.1E-51 T 09-03-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RG43_RS16645 44f84615b4495ce0ded6e05e4791d37d 361 Gene3D G3DSA:1.20.5.460 282 309 4.2E-21 T 09-03-2017 RG43_RS16645 44f84615b4495ce0ded6e05e4791d37d 361 Gene3D G3DSA:1.10.1530.10 6 75 2.0E-21 T 09-03-2017 RG43_RS16645 44f84615b4495ce0ded6e05e4791d37d 361 Pfam PF02615 Malate/L-lactate dehydrogenase 8 338 4.4E-114 T 09-03-2017 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 RG43_RS16645 44f84615b4495ce0ded6e05e4791d37d 361 Gene3D G3DSA:3.30.1370.60 76 280 1.1E-81 T 09-03-2017 RG43_RS16645 44f84615b4495ce0ded6e05e4791d37d 361 SUPERFAMILY SSF89733 6 349 2.75E-107 T 09-03-2017 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 RG43_RS10655 77a1127473535d6ffbe20b8e26f1a67a 271 Gene3D G3DSA:3.40.50.1000 9 89 2.7E-39 T 09-03-2017 IPR023214 HAD-like domain RG43_RS10655 77a1127473535d6ffbe20b8e26f1a67a 271 Gene3D G3DSA:3.40.50.1000 180 264 2.7E-39 T 09-03-2017 IPR023214 HAD-like domain RG43_RS10655 77a1127473535d6ffbe20b8e26f1a67a 271 Hamap MF_00617 Mannosyl-3-phosphoglycerate phosphatase [mngB]. 6 253 41.586 T 09-03-2017 IPR012815 Mannosyl-3-phosphoglycerate phosphatase GO:0005737|GO:0050531|GO:0051479 KEGG: 00051+3.1.3.70|MetaCyc: PWY-5656 RG43_RS10655 77a1127473535d6ffbe20b8e26f1a67a 271 TIGRFAM TIGR02463 MPGP_rel: mannosyl-3-phosphoglycerate phosphatase homolog 9 232 1.5E-101 T 09-03-2017 RG43_RS10655 77a1127473535d6ffbe20b8e26f1a67a 271 SUPERFAMILY SSF56784 6 232 1.27E-47 T 09-03-2017 IPR023214 HAD-like domain RG43_RS10655 77a1127473535d6ffbe20b8e26f1a67a 271 TIGRFAM TIGR01486 HAD-SF-IIB-MPGP: mannosyl-3-phosphoglycerate phosphatase family 9 268 1.1E-103 T 09-03-2017 IPR006381 HAD-superfamily hydrolase, superfamily IIB, MPGP GO:0005737|GO:0050531|GO:0051479 KEGG: 00051+3.1.3.70|MetaCyc: PWY-5656 RG43_RS10655 77a1127473535d6ffbe20b8e26f1a67a 271 Pfam PF08282 haloacid dehalogenase-like hydrolase 10 232 1.4E-13 T 09-03-2017 IPR023214 HAD-like domain RG43_RS10655 77a1127473535d6ffbe20b8e26f1a67a 271 Gene3D G3DSA:3.30.980.20 94 179 1.9E-38 T 09-03-2017 RG43_RS10655 77a1127473535d6ffbe20b8e26f1a67a 271 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 9 231 3.6E-48 T 09-03-2017 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 RG43_RS20270 fafbca36c96fda832f329b977ec4bcd2 798 Gene3D G3DSA:3.40.50.300 182 334 6.7E-27 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS20270 fafbca36c96fda832f329b977ec4bcd2 798 Gene3D G3DSA:3.40.50.300 48 126 6.7E-27 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS20270 fafbca36c96fda832f329b977ec4bcd2 798 Pfam PF00350 Dynamin family 71 299 3.1E-18 T 09-03-2017 IPR022812 Dynamin superfamily RG43_RS20270 fafbca36c96fda832f329b977ec4bcd2 798 SUPERFAMILY SSF52540 50 122 1.12E-26 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS20270 fafbca36c96fda832f329b977ec4bcd2 798 SUPERFAMILY SSF52540 200 338 1.12E-26 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS23660 d08dcd82758dc29434657b395b160c91 529 SMART SM00851 19 132 1.4E-64 T 09-03-2017 IPR011607 Methylglyoxal synthase-like domain RG43_RS23660 d08dcd82758dc29434657b395b160c91 529 Pfam PF02142 MGS-like domain 19 132 6.9E-32 T 09-03-2017 IPR011607 Methylglyoxal synthase-like domain RG43_RS23660 d08dcd82758dc29434657b395b160c91 529 SMART SM00798 137 461 3.0E-218 T 09-03-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RG43_RS23660 d08dcd82758dc29434657b395b160c91 529 Gene3D G3DSA:3.40.50.1380 5 190 8.8E-88 T 09-03-2017 IPR011607 Methylglyoxal synthase-like domain RG43_RS23660 d08dcd82758dc29434657b395b160c91 529 PIRSF PIRSF000414 1 529 2.4E-229 T 09-03-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RG43_RS23660 d08dcd82758dc29434657b395b160c91 529 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 460 3.6E-121 T 09-03-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RG43_RS23660 d08dcd82758dc29434657b395b160c91 529 Gene3D G3DSA:3.40.140.20 377 519 9.1E-61 T 09-03-2017 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RG43_RS23660 d08dcd82758dc29434657b395b160c91 529 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 529 45.739 T 09-03-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RG43_RS23660 d08dcd82758dc29434657b395b160c91 529 SUPERFAMILY SSF52335 7 197 4.97E-73 T 09-03-2017 IPR011607 Methylglyoxal synthase-like domain RG43_RS23660 d08dcd82758dc29434657b395b160c91 529 SUPERFAMILY SSF53927 221 529 4.31E-131 T 09-03-2017 IPR016193 Cytidine deaminase-like GO:0003824 RG43_RS23660 d08dcd82758dc29434657b395b160c91 529 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 529 8.6E-274 T 09-03-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RG43_RS23660 d08dcd82758dc29434657b395b160c91 529 Gene3D G3DSA:3.40.140.20 253 371 1.7E-50 T 09-03-2017 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RG43_RS24005 0c24c67af69fb8d800edcaddd8db39ec 220 ProSitePatterns PS00958 Transaldolase active site. 82 99 - T 09-03-2017 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 RG43_RS24005 0c24c67af69fb8d800edcaddd8db39ec 220 SUPERFAMILY SSF51569 1 216 4.08E-65 T 09-03-2017 RG43_RS24005 0c24c67af69fb8d800edcaddd8db39ec 220 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 09-03-2017 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 RG43_RS24005 0c24c67af69fb8d800edcaddd8db39ec 220 Gene3D G3DSA:3.20.20.70 1 214 7.8E-65 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS24005 0c24c67af69fb8d800edcaddd8db39ec 220 Hamap MF_00496 Fructose-6-phosphate aldolase [fsa]. 1 220 52.425 T 09-03-2017 IPR023001 Fructose-6-phosphate aldolase GO:0016832 RG43_RS24005 0c24c67af69fb8d800edcaddd8db39ec 220 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 215 3.6E-106 T 09-03-2017 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RG43_RS24005 0c24c67af69fb8d800edcaddd8db39ec 220 Pfam PF00923 Transaldolase 3 206 8.3E-48 T 09-03-2017 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 RG43_RS11060 da02627f4336a0d66369c4a5a6f3d4fd 286 SUPERFAMILY SSF53335 92 281 2.84E-60 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS11060 da02627f4336a0d66369c4a5a6f3d4fd 286 Pfam PF01739 CheR methyltransferase, SAM binding domain 92 280 4.4E-62 T 09-03-2017 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal RG43_RS11060 da02627f4336a0d66369c4a5a6f3d4fd 286 Gene3D G3DSA:3.40.50.150 91 282 1.0E-69 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS11060 da02627f4336a0d66369c4a5a6f3d4fd 286 PRINTS PR00996 Glutamate methyltransferase family signature 224 238 6.0E-48 T 09-03-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 RG43_RS11060 da02627f4336a0d66369c4a5a6f3d4fd 286 PRINTS PR00996 Glutamate methyltransferase family signature 85 97 6.0E-48 T 09-03-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 RG43_RS11060 da02627f4336a0d66369c4a5a6f3d4fd 286 PRINTS PR00996 Glutamate methyltransferase family signature 243 266 6.0E-48 T 09-03-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 RG43_RS11060 da02627f4336a0d66369c4a5a6f3d4fd 286 PRINTS PR00996 Glutamate methyltransferase family signature 118 138 6.0E-48 T 09-03-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 RG43_RS11060 da02627f4336a0d66369c4a5a6f3d4fd 286 PRINTS PR00996 Glutamate methyltransferase family signature 46 59 6.0E-48 T 09-03-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 RG43_RS11060 da02627f4336a0d66369c4a5a6f3d4fd 286 PRINTS PR00996 Glutamate methyltransferase family signature 152 168 6.0E-48 T 09-03-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 RG43_RS11060 da02627f4336a0d66369c4a5a6f3d4fd 286 Pfam PF03705 CheR methyltransferase, all-alpha domain 26 77 3.3E-18 T 09-03-2017 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal RG43_RS11060 da02627f4336a0d66369c4a5a6f3d4fd 286 PIRSF PIRSF000410 10 285 2.6E-104 T 09-03-2017 IPR026024 Chemotaxis protein methyltransferase CheR RG43_RS11060 da02627f4336a0d66369c4a5a6f3d4fd 286 SMART SM00138 24 284 6.0E-141 T 09-03-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 RG43_RS11060 da02627f4336a0d66369c4a5a6f3d4fd 286 Gene3D G3DSA:1.10.155.10 14 90 1.7E-33 T 09-03-2017 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal RG43_RS11060 da02627f4336a0d66369c4a5a6f3d4fd 286 SUPERFAMILY SSF47757 15 91 1.07E-23 T 09-03-2017 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal RG43_RS22440 70d716e72e21ffc79d5aeaf73bac2f60 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 117 203 3.5E-28 T 09-03-2017 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 RG43_RS22440 70d716e72e21ffc79d5aeaf73bac2f60 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 3 108 7.4E-23 T 09-03-2017 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 RG43_RS22440 70d716e72e21ffc79d5aeaf73bac2f60 206 SUPERFAMILY SSF54534 8 205 2.95E-56 T 09-03-2017 RG43_RS22440 70d716e72e21ffc79d5aeaf73bac2f60 206 Gene3D G3DSA:3.10.50.40 89 205 4.3E-51 T 09-03-2017 RG43_RS22440 70d716e72e21ffc79d5aeaf73bac2f60 206 Gene3D G3DSA:1.10.287.460 2 88 1.3E-25 T 09-03-2017 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 RG43_RS11200 faac83e5e9b1465984f40dcf910d5f39 164 Pfam PF01904 Protein of unknown function DUF72 21 159 1.6E-38 T 09-03-2017 IPR002763 Protein of unknown function DUF72 RG43_RS11200 faac83e5e9b1465984f40dcf910d5f39 164 Gene3D G3DSA:3.20.20.410 1 160 1.7E-54 T 09-03-2017 IPR002763 Protein of unknown function DUF72 RG43_RS11200 faac83e5e9b1465984f40dcf910d5f39 164 SUPERFAMILY SSF117396 1 159 4.71E-51 T 09-03-2017 IPR002763 Protein of unknown function DUF72 RG43_RS09350 4fb159bd103dbaf0e750ffb1d7efc7c4 350 Gene3D G3DSA:3.20.20.70 52 345 8.8E-101 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS09350 4fb159bd103dbaf0e750ffb1d7efc7c4 350 Pfam PF01791 DeoC/LacD family aldolase 69 326 4.0E-75 T 09-03-2017 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-71336 RG43_RS09350 4fb159bd103dbaf0e750ffb1d7efc7c4 350 SMART SM01133 68 326 5.5E-42 T 09-03-2017 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-71336 RG43_RS09350 4fb159bd103dbaf0e750ffb1d7efc7c4 350 SUPERFAMILY SSF51569 56 242 5.13E-66 T 09-03-2017 RG43_RS09350 4fb159bd103dbaf0e750ffb1d7efc7c4 350 SUPERFAMILY SSF51569 270 344 5.13E-66 T 09-03-2017 RG43_RS11030 48c640993214bdae296ba7c2bf30318e 295 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 09-03-2017 IPR000540 Flagellar motor protein MotA, conserved site RG43_RS11030 48c640993214bdae296ba7c2bf30318e 295 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 2 281 1.3E-115 T 09-03-2017 IPR022522 Flagellar motor stator, MotA RG43_RS11030 48c640993214bdae296ba7c2bf30318e 295 Pfam PF01618 MotA/TolQ/ExbB proton channel family 140 239 4.0E-11 T 09-03-2017 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 RG43_RS25135 5078212cf1af31cdd9f63f65d113c609 411 Pfam PF13186 Iron-sulfur cluster-binding domain 283 343 1.2E-9 T 09-03-2017 IPR023885 4Fe4S-binding SPASM domain RG43_RS25135 5078212cf1af31cdd9f63f65d113c609 411 SUPERFAMILY SSF102114 20 352 2.09E-39 T 09-03-2017 RG43_RS25135 5078212cf1af31cdd9f63f65d113c609 411 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 141 402 2.0E-18 T 09-03-2017 RG43_RS25135 5078212cf1af31cdd9f63f65d113c609 411 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 282 371 1.2E-18 T 09-03-2017 IPR023885 4Fe4S-binding SPASM domain RG43_RS25135 5078212cf1af31cdd9f63f65d113c609 411 Pfam PF13353 4Fe-4S single cluster domain 19 126 1.0E-4 T 09-03-2017 RG43_RS25135 5078212cf1af31cdd9f63f65d113c609 411 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 11 390 2.5E-155 T 09-03-2017 IPR023867 Anaerobic sulphatase maturase, radical SAM GO:0016491 RG43_RS25135 5078212cf1af31cdd9f63f65d113c609 411 Pfam PF04055 Radical SAM superfamily 20 169 5.1E-13 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 RG43_RS25135 5078212cf1af31cdd9f63f65d113c609 411 Gene3D G3DSA:3.20.20.70 19 358 2.4E-44 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS01725 f868da067ce0f99d1d72d1be97c610bd 728 SUPERFAMILY SSF51445 228 621 7.65E-111 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily RG43_RS01725 f868da067ce0f99d1d72d1be97c610bd 728 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 125 207 7.6E-26 T 09-03-2017 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 RG43_RS01725 f868da067ce0f99d1d72d1be97c610bd 728 SMART SM00642 247 596 2.5E-6 T 09-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RG43_RS01725 f868da067ce0f99d1d72d1be97c610bd 728 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 101 726 43.832 T 09-03-2017 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 RG43_RS01725 f868da067ce0f99d1d72d1be97c610bd 728 SUPERFAMILY SSF81296 117 223 2.62E-35 T 09-03-2017 IPR014756 Immunoglobulin E-set RG43_RS01725 f868da067ce0f99d1d72d1be97c610bd 728 Pfam PF00128 Alpha amylase, catalytic domain 273 344 3.0E-8 T 09-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RG43_RS01725 f868da067ce0f99d1d72d1be97c610bd 728 Gene3D G3DSA:2.60.40.1180 624 725 4.5E-37 T 09-03-2017 IPR013780 Glycosyl hydrolase, all-beta RG43_RS01725 f868da067ce0f99d1d72d1be97c610bd 728 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 109 723 0.0 T 09-03-2017 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 RG43_RS01725 f868da067ce0f99d1d72d1be97c610bd 728 SUPERFAMILY SSF81296 16 115 1.22E-18 T 09-03-2017 IPR014756 Immunoglobulin E-set RG43_RS01725 f868da067ce0f99d1d72d1be97c610bd 728 Gene3D G3DSA:3.20.20.80 242 610 2.8E-90 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RG43_RS01725 f868da067ce0f99d1d72d1be97c610bd 728 Gene3D G3DSA:2.60.40.10 113 220 1.3E-41 T 09-03-2017 IPR013783 Immunoglobulin-like fold RG43_RS01725 f868da067ce0f99d1d72d1be97c610bd 728 Gene3D G3DSA:2.60.40.10 14 104 1.4E-20 T 09-03-2017 IPR013783 Immunoglobulin-like fold RG43_RS01725 f868da067ce0f99d1d72d1be97c610bd 728 SUPERFAMILY SSF51011 623 726 3.51E-35 T 09-03-2017 RG43_RS01725 f868da067ce0f99d1d72d1be97c610bd 728 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 628 725 7.8E-24 T 09-03-2017 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 RG43_RS01725 f868da067ce0f99d1d72d1be97c610bd 728 PIRSF PIRSF000463 6 728 1.2E-284 T 09-03-2017 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 RG43_RS16950 b622b22df3909116837f14822fe2c19f 97 Pfam PF06291 Bor protein 1 97 5.0E-60 T 09-03-2017 IPR010438 Bor GO:0009279 RG43_RS16950 b622b22df3909116837f14822fe2c19f 97 ProDom PD020173 BOR LIPOPROTEIN PLASMID ISS HOMOLOG MEMBRANE FROM PRECURSOR PALMITATE DLP12 1 96 1.0E-49 T 09-03-2017 IPR010438 Bor GO:0009279 RG43_RS21670 9b90291244a6893c80b1298e3e5413e7 259 SMART SM01133 10 246 6.8E-81 T 09-03-2017 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-71336 RG43_RS21670 9b90291244a6893c80b1298e3e5413e7 259 Gene3D G3DSA:3.20.20.70 3 254 7.4E-94 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS21670 9b90291244a6893c80b1298e3e5413e7 259 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 259 55.255 T 09-03-2017 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 RG43_RS21670 9b90291244a6893c80b1298e3e5413e7 259 PIRSF PIRSF001357 5 255 2.6E-78 T 09-03-2017 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-71336 RG43_RS21670 9b90291244a6893c80b1298e3e5413e7 259 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 232 8.8E-89 T 09-03-2017 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-71336 RG43_RS21670 9b90291244a6893c80b1298e3e5413e7 259 SUPERFAMILY SSF51569 6 246 2.2E-82 T 09-03-2017 RG43_RS21670 9b90291244a6893c80b1298e3e5413e7 259 Pfam PF01791 DeoC/LacD family aldolase 11 245 6.3E-54 T 09-03-2017 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-71336 RG43_RS13390 80ec67440322ff6ee8b600432f9debf6 381 SUPERFAMILY SSF53850 33 357 3.17E-55 T 09-03-2017 RG43_RS13390 80ec67440322ff6ee8b600432f9debf6 381 Pfam PF13416 Bacterial extracellular solute-binding protein 56 326 9.2E-26 T 09-03-2017 RG43_RS13390 80ec67440322ff6ee8b600432f9debf6 381 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 136 152 1.9E-6 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 RG43_RS13390 80ec67440322ff6ee8b600432f9debf6 381 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 276 295 1.9E-6 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 RG43_RS13390 80ec67440322ff6ee8b600432f9debf6 381 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 62 83 1.9E-6 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 RG43_RS13390 80ec67440322ff6ee8b600432f9debf6 381 Gene3D G3DSA:3.40.190.10 35 145 7.7E-29 T 09-03-2017 RG43_RS13390 80ec67440322ff6ee8b600432f9debf6 381 Gene3D G3DSA:3.40.190.10 300 327 7.7E-29 T 09-03-2017 RG43_RS13390 80ec67440322ff6ee8b600432f9debf6 381 Gene3D G3DSA:3.40.190.10 147 299 1.8E-28 T 09-03-2017 RG43_RS05015 6862497f09c4b541edc9fcd545f4a5cf 165 Pfam PF10263 SprT-like family 19 163 2.0E-27 T 09-03-2017 IPR006640 SprT-like RG43_RS05015 6862497f09c4b541edc9fcd545f4a5cf 165 Hamap MF_00746 Protein SprT [sprT]. 12 165 41.469 T 09-03-2017 IPR023483 Uncharacterised protein family SprT RG43_RS05015 6862497f09c4b541edc9fcd545f4a5cf 165 SMART SM00731 16 165 2.9E-62 T 09-03-2017 IPR006640 SprT-like RG43_RS17010 f1cb94ba3723a01ec0aef0460d1cbee4 175 Pfam PF05869 DNA N-6-adenine-methyltransferase (Dam) 4 170 1.9E-63 T 09-03-2017 IPR008593 DNA N-6-adenine-methyltransferase GO:0003677|GO:0009007|GO:0032775 RG43_RS17010 f1cb94ba3723a01ec0aef0460d1cbee4 175 TIGRFAM TIGR01712 phage_N6A_met: phage N-6-adenine-methyltransferase 2 168 2.6E-80 T 09-03-2017 IPR008593 DNA N-6-adenine-methyltransferase GO:0003677|GO:0009007|GO:0032775 RG43_RS15140 431c29d12572b3e84a383c49aa1bc4b8 1061 SMART SM00316 37 119 9.5E-12 T 09-03-2017 IPR022967 RNA-binding domain, S1 RG43_RS15140 431c29d12572b3e84a383c49aa1bc4b8 1061 Hamap MF_00970 Ribonuclease E [rne]. 1 1047 40.913 T 09-03-2017 IPR028878 Ribonuclease E GO:0006396|GO:0008995 RG43_RS15140 431c29d12572b3e84a383c49aa1bc4b8 1061 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 425 6.2E-172 T 09-03-2017 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 RG43_RS15140 431c29d12572b3e84a383c49aa1bc4b8 1061 Gene3D G3DSA:2.40.50.140 31 124 8.1E-36 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS15140 431c29d12572b3e84a383c49aa1bc4b8 1061 Pfam PF10150 Ribonuclease E/G family 121 391 1.9E-93 T 09-03-2017 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 RG43_RS15140 431c29d12572b3e84a383c49aa1bc4b8 1061 Pfam PF12111 Polyribonucleotide phosphorylase C terminal 1022 1058 1.8E-16 T 09-03-2017 IPR021968 Polyribonucleotide phosphorylase C-terminal RG43_RS15140 431c29d12572b3e84a383c49aa1bc4b8 1061 SUPERFAMILY SSF50249 40 124 1.82E-20 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS15140 431c29d12572b3e84a383c49aa1bc4b8 1061 Pfam PF00575 S1 RNA binding domain 36 118 3.5E-16 T 09-03-2017 IPR003029 S1 domain GO:0003676 RG43_RS11520 eb018e169cbdc2b55397b440c2326260 206 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 19 203 25.746 T 09-03-2017 IPR022929 Putative manganese efflux pump MntP RG43_RS11520 eb018e169cbdc2b55397b440c2326260 206 Pfam PF02659 Putative manganese efflux pump 49 200 1.4E-53 T 09-03-2017 IPR003810 Putative manganese efflux pump RG43_RS13110 728d7d0d2beb7c8f331af63a49460976 511 Pfam PF13520 Amino acid permease 13 451 1.5E-55 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RG43_RS13110 728d7d0d2beb7c8f331af63a49460976 511 PIRSF PIRSF006060 6 485 1.5E-67 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RG43_RS13110 728d7d0d2beb7c8f331af63a49460976 511 TIGRFAM TIGR00910 2A0307_GadC: glutamate:gamma-aminobutyrate antiporter 1 511 0.0 T 09-03-2017 IPR004759 Glutamate:g-aminobutyrate antiporter GO:0006865|GO:0016021 RG43_RS25975 9cbf26b4e42e1388f06973a134f61473 150 SUPERFAMILY SSF51161 10 150 4.71E-30 T 09-03-2017 IPR011004 Trimeric LpxA-like RG43_RS25975 9cbf26b4e42e1388f06973a134f61473 150 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 100 131 4.9E-4 T 09-03-2017 IPR001451 Hexapeptide repeat RG43_RS25975 9cbf26b4e42e1388f06973a134f61473 150 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 28 60 1.6E-8 T 09-03-2017 IPR001451 Hexapeptide repeat RG43_RS25975 9cbf26b4e42e1388f06973a134f61473 150 Gene3D G3DSA:2.160.10.10 10 149 8.8E-31 T 09-03-2017 RG43_RS04560 9cbf26b4e42e1388f06973a134f61473 150 SUPERFAMILY SSF51161 10 150 4.71E-30 T 09-03-2017 IPR011004 Trimeric LpxA-like RG43_RS04560 9cbf26b4e42e1388f06973a134f61473 150 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 100 131 4.9E-4 T 09-03-2017 IPR001451 Hexapeptide repeat RG43_RS04560 9cbf26b4e42e1388f06973a134f61473 150 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 28 60 1.6E-8 T 09-03-2017 IPR001451 Hexapeptide repeat RG43_RS04560 9cbf26b4e42e1388f06973a134f61473 150 Gene3D G3DSA:2.160.10.10 10 149 8.8E-31 T 09-03-2017 RG43_RS08520 150f78098512aec8d6c9503e9dd5f5db 180 SUPERFAMILY SSF56925 56 177 1.73E-8 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RG43_RS08520 150f78098512aec8d6c9503e9dd5f5db 180 Pfam PF07437 YfaZ precursor 1 180 1.6E-91 T 09-03-2017 IPR009998 YfaZ RG43_RS08520 150f78098512aec8d6c9503e9dd5f5db 180 Gene3D G3DSA:2.40.160.10 13 180 3.0E-9 T 09-03-2017 IPR023614 Porin domain RG43_RS07695 02045c8860c0255d9d2188a3e78911c0 254 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 34 254 3.6E-38 T 09-03-2017 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 RG43_RS07695 02045c8860c0255d9d2188a3e78911c0 254 SUPERFAMILY SSF111364 26 254 3.79E-43 T 09-03-2017 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 RG43_RS15205 3e8d86b7a557f5f3957a7efcc60aeb06 138 PIRSF PIRSF002889 1 137 3.4E-44 T 09-03-2017 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 RG43_RS15205 3e8d86b7a557f5f3957a7efcc60aeb06 138 Pfam PF00460 Flagella basal body rod protein 9 39 2.2E-12 T 09-03-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 RG43_RS15205 3e8d86b7a557f5f3957a7efcc60aeb06 138 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 09-03-2017 IPR019776 Flagellar basal body rod protein, conserved site RG43_RS15205 3e8d86b7a557f5f3957a7efcc60aeb06 138 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 6 135 7.6E-50 T 09-03-2017 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 RG43_RS09790 8c57d125eea7c833820eb8b92c26002a 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.2E-12 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS09790 8c57d125eea7c833820eb8b92c26002a 309 Gene3D G3DSA:1.10.10.10 6 86 2.7E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS09790 8c57d125eea7c833820eb8b92c26002a 309 Gene3D G3DSA:3.40.190.10 90 199 7.7E-16 T 09-03-2017 RG43_RS09790 8c57d125eea7c833820eb8b92c26002a 309 SUPERFAMILY SSF53850 90 292 1.17E-25 T 09-03-2017 RG43_RS09790 8c57d125eea7c833820eb8b92c26002a 309 Pfam PF03466 LysR substrate binding domain 89 291 2.4E-23 T 09-03-2017 IPR005119 LysR, substrate-binding RG43_RS09790 8c57d125eea7c833820eb8b92c26002a 309 SUPERFAMILY SSF46785 5 88 4.08E-14 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS20095 327c877d6f5c7e3c5044d7e2ffeb1d4e 192 Pfam PF13580 SIS domain 12 146 2.6E-32 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 RG43_RS20095 327c877d6f5c7e3c5044d7e2ffeb1d4e 192 Gene3D G3DSA:3.40.50.10490 1 190 6.7E-64 T 09-03-2017 RG43_RS20095 327c877d6f5c7e3c5044d7e2ffeb1d4e 192 SUPERFAMILY SSF53697 1 189 2.6E-52 T 09-03-2017 RG43_RS20095 327c877d6f5c7e3c5044d7e2ffeb1d4e 192 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 38.958 T 09-03-2017 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 RG43_RS20095 327c877d6f5c7e3c5044d7e2ffeb1d4e 192 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 1.4E-84 T 09-03-2017 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 RG43_RS13325 b58e095c83b2a68e4ccf7e50f64fa994 221 Gene3D G3DSA:1.20.120.530 80 219 2.8E-23 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal RG43_RS13325 b58e095c83b2a68e4ccf7e50f64fa994 221 Gene3D G3DSA:1.10.10.10 3 74 1.3E-14 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS13325 b58e095c83b2a68e4ccf7e50f64fa994 221 SMART SM00895 84 210 3.1E-14 T 09-03-2017 IPR011711 GntR, C-terminal RG43_RS13325 b58e095c83b2a68e4ccf7e50f64fa994 221 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 74 3.2E-11 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS13325 b58e095c83b2a68e4ccf7e50f64fa994 221 SMART SM00345 16 74 3.3E-17 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS13325 b58e095c83b2a68e4ccf7e50f64fa994 221 SUPERFAMILY SSF48008 81 216 4.71E-21 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal RG43_RS13325 b58e095c83b2a68e4ccf7e50f64fa994 221 SUPERFAMILY SSF46785 6 78 4.28E-12 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS13325 b58e095c83b2a68e4ccf7e50f64fa994 221 Pfam PF07729 FCD domain 85 209 2.5E-24 T 09-03-2017 IPR011711 GntR, C-terminal RG43_RS12350 8772cb040f2b5d7253f583d2f328de82 341 Gene3D G3DSA:3.40.50.2300 171 332 8.9E-63 T 09-03-2017 RG43_RS12350 8772cb040f2b5d7253f583d2f328de82 341 SMART SM00354 1 71 3.0E-37 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS12350 8772cb040f2b5d7253f583d2f328de82 341 SUPERFAMILY SSF47413 1 59 1.29E-16 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS12350 8772cb040f2b5d7253f583d2f328de82 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 6.4E-19 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS12350 8772cb040f2b5d7253f583d2f328de82 341 Gene3D G3DSA:1.10.260.40 2 60 7.9E-24 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS12350 8772cb040f2b5d7253f583d2f328de82 341 Gene3D G3DSA:3.40.50.2300 61 170 1.4E-33 T 09-03-2017 RG43_RS12350 8772cb040f2b5d7253f583d2f328de82 341 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 335 58.896 T 09-03-2017 IPR023588 Transcription regulator HTH, PurR GO:0006355 RG43_RS12350 8772cb040f2b5d7253f583d2f328de82 341 Pfam PF13377 Periplasmic binding protein-like domain 171 331 9.4E-41 T 09-03-2017 RG43_RS12350 8772cb040f2b5d7253f583d2f328de82 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 1.7E-5 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS12350 8772cb040f2b5d7253f583d2f328de82 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 1.7E-5 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS12350 8772cb040f2b5d7253f583d2f328de82 341 SUPERFAMILY SSF53822 60 340 9.82E-95 T 09-03-2017 IPR028082 Periplasmic binding protein-like I RG43_RS12350 8772cb040f2b5d7253f583d2f328de82 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 09-03-2017 RG43_RS14800 1bdcb466f3ccc4d7c80bac3f872332e0 78 Pfam PF10798 Biofilm development protein YmgB/AriR 27 63 1.1E-5 T 09-03-2017 IPR024753 Regulatory protein AriR GO:0042710|GO:0071229 RG43_RS14800 1bdcb466f3ccc4d7c80bac3f872332e0 78 ProDom PD865043 PLASMID SPA-ORF10 3'REGION CYTOPLASMIC ORF-10 SPAS STY1854 25 76 0.006 T 09-03-2017 IPR024753 Regulatory protein AriR GO:0042710|GO:0071229 RG43_RS13460 cc3b64b440045a5e7ead209366df250a 326 SUPERFAMILY SSF51161 4 318 2.64E-59 T 09-03-2017 IPR011004 Trimeric LpxA-like RG43_RS13460 cc3b64b440045a5e7ead209366df250a 326 Gene3D G3DSA:2.160.10.10 46 132 1.7E-27 T 09-03-2017 RG43_RS13460 cc3b64b440045a5e7ead209366df250a 326 Gene3D G3DSA:2.160.10.10 242 302 1.7E-27 T 09-03-2017 RG43_RS05030 6e54240b246735d5a285824d43665226 384 SUPERFAMILY SSF55973 112 232 7.46E-52 T 09-03-2017 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 RG43_RS05030 6e54240b246735d5a285824d43665226 384 Gene3D G3DSA:3.30.300.10 244 381 4.2E-72 T 09-03-2017 RG43_RS05030 6e54240b246735d5a285824d43665226 384 SUPERFAMILY SSF55973 233 382 9.03E-72 T 09-03-2017 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 RG43_RS05030 6e54240b246735d5a285824d43665226 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 09-03-2017 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 RG43_RS05030 6e54240b246735d5a285824d43665226 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 380 1.5E-201 T 09-03-2017 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 RG43_RS05030 6e54240b246735d5a285824d43665226 384 SUPERFAMILY SSF55973 3 109 1.29E-47 T 09-03-2017 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 RG43_RS05030 6e54240b246735d5a285824d43665226 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 5.6E-43 T 09-03-2017 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 RG43_RS05030 6e54240b246735d5a285824d43665226 384 Gene3D G3DSA:3.30.300.10 136 233 4.4E-44 T 09-03-2017 RG43_RS05030 6e54240b246735d5a285824d43665226 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 60.288 T 09-03-2017 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 RG43_RS05030 6e54240b246735d5a285824d43665226 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 370 5.7E-70 T 09-03-2017 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 RG43_RS05030 6e54240b246735d5a285824d43665226 384 Gene3D G3DSA:3.30.300.10 11 135 1.3E-50 T 09-03-2017 RG43_RS05030 6e54240b246735d5a285824d43665226 384 PIRSF PIRSF000497 1 382 2.4E-176 T 09-03-2017 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 RG43_RS05030 6e54240b246735d5a285824d43665226 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 09-03-2017 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 RG43_RS05030 6e54240b246735d5a285824d43665226 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 1.2E-45 T 09-03-2017 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 RG43_RS25410 dfc2b4a3f3b43c8ba9564d8a53e155e1 330 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 1 330 46.216 T 09-03-2017 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 RG43_RS25410 dfc2b4a3f3b43c8ba9564d8a53e155e1 330 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 1 330 4.9E-201 T 09-03-2017 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 RG43_RS25410 dfc2b4a3f3b43c8ba9564d8a53e155e1 330 Pfam PF03590 Aspartate-ammonia ligase 9 244 1.3E-93 T 09-03-2017 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 RG43_RS25410 dfc2b4a3f3b43c8ba9564d8a53e155e1 330 SUPERFAMILY SSF55681 7 329 1.88E-98 T 09-03-2017 RG43_RS25410 dfc2b4a3f3b43c8ba9564d8a53e155e1 330 Gene3D G3DSA:3.30.930.10 2 326 5.5E-153 T 09-03-2017 RG43_RS25410 dfc2b4a3f3b43c8ba9564d8a53e155e1 330 PIRSF PIRSF001555 1 329 2.9E-151 T 09-03-2017 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 RG43_RS02380 d44845a02f8ee59d1e9b327b0534f8f6 110 Pfam PF00237 Ribosomal protein L22p/L17e 8 107 7.3E-34 T 09-03-2017 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 RG43_RS02380 d44845a02f8ee59d1e9b327b0534f8f6 110 Gene3D G3DSA:3.90.470.10 1 109 3.1E-43 T 09-03-2017 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 RG43_RS02380 d44845a02f8ee59d1e9b327b0534f8f6 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 09-03-2017 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02380 d44845a02f8ee59d1e9b327b0534f8f6 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 4.1E-51 T 09-03-2017 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS02380 d44845a02f8ee59d1e9b327b0534f8f6 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.067 T 09-03-2017 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS02380 d44845a02f8ee59d1e9b327b0534f8f6 110 SUPERFAMILY SSF54843 1 109 4.06E-43 T 09-03-2017 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 RG43_RS15840 23087ccec267696b61879e8f64990421 187 Gene3D G3DSA:3.40.50.10610 14 181 5.2E-14 T 09-03-2017 IPR005586 ABC-type transport auxiliary lipoprotein component RG43_RS15840 23087ccec267696b61879e8f64990421 187 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 26 180 7.7E-40 T 09-03-2017 IPR005586 ABC-type transport auxiliary lipoprotein component RG43_RS15840 23087ccec267696b61879e8f64990421 187 SUPERFAMILY SSF159594 24 184 4.18E-28 T 09-03-2017 RG43_RS05905 3adb2dea275594b7a7cb05cfd70a4205 446 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 39 136 9.2E-8 T 09-03-2017 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain RG43_RS05905 3adb2dea275594b7a7cb05cfd70a4205 446 SUPERFAMILY SSF51604 138 415 1.77E-84 T 09-03-2017 IPR029065 Enolase C-terminal domain-like RG43_RS05905 3adb2dea275594b7a7cb05cfd70a4205 446 Pfam PF13378 Enolase C-terminal domain-like 187 404 7.4E-40 T 09-03-2017 IPR029065 Enolase C-terminal domain-like RG43_RS05905 3adb2dea275594b7a7cb05cfd70a4205 446 SMART SM00922 184 284 2.8E-15 T 09-03-2017 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RG43_RS05905 3adb2dea275594b7a7cb05cfd70a4205 446 Gene3D G3DSA:3.30.390.10 8 123 5.0E-17 T 09-03-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RG43_RS05905 3adb2dea275594b7a7cb05cfd70a4205 446 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 111 136 - T 09-03-2017 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 RG43_RS05905 3adb2dea275594b7a7cb05cfd70a4205 446 Gene3D G3DSA:3.20.20.120 124 397 1.6E-104 T 09-03-2017 IPR029065 Enolase C-terminal domain-like RG43_RS05905 3adb2dea275594b7a7cb05cfd70a4205 446 SUPERFAMILY SSF54826 7 136 1.77E-31 T 09-03-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RG43_RS09900 c75f97c40585a3dd452b29db47482bb5 356 Pfam PF01734 Patatin-like phospholipase 9 238 3.7E-19 T 09-03-2017 IPR002641 Patatin/Phospholipase A2-related GO:0006629 RG43_RS09900 c75f97c40585a3dd452b29db47482bb5 356 SUPERFAMILY SSF52151 4 80 1.27E-34 T 09-03-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RG43_RS09900 c75f97c40585a3dd452b29db47482bb5 356 SUPERFAMILY SSF52151 123 273 1.27E-34 T 09-03-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RG43_RS18645 bc54172278741905cd4b02571125d3ec 125 Pfam PF04304 Protein of unknown function (DUF454) 3 116 4.3E-41 T 09-03-2017 IPR007401 Protein of unknown function DUF454 RG43_RS18645 bc54172278741905cd4b02571125d3ec 125 PIRSF PIRSF016789 2 123 5.3E-51 T 09-03-2017 IPR007401 Protein of unknown function DUF454 RG43_RS22330 ac8737d47b9e34b7c4d5c6cbda1b1479 500 Pfam PF00005 ABC transporter 25 174 1.0E-30 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS22330 ac8737d47b9e34b7c4d5c6cbda1b1479 500 Pfam PF00005 ABC transporter 279 430 2.5E-17 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS22330 ac8737d47b9e34b7c4d5c6cbda1b1479 500 Gene3D G3DSA:3.40.50.300 7 235 5.4E-64 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS22330 ac8737d47b9e34b7c4d5c6cbda1b1479 500 SMART SM00382 34 222 2.0E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS22330 ac8737d47b9e34b7c4d5c6cbda1b1479 500 SMART SM00382 285 479 0.38 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS22330 ac8737d47b9e34b7c4d5c6cbda1b1479 500 Gene3D G3DSA:3.40.50.300 268 490 1.5E-46 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS22330 ac8737d47b9e34b7c4d5c6cbda1b1479 500 ProSitePatterns PS00211 ABC transporters family signature. 403 417 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS22330 ac8737d47b9e34b7c4d5c6cbda1b1479 500 SUPERFAMILY SSF52540 9 232 3.82E-60 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS22330 ac8737d47b9e34b7c4d5c6cbda1b1479 500 SUPERFAMILY SSF52540 268 489 3.97E-44 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS15280 211a27cb3f34b054f0b4865a49917e49 46 ProDom PD049682 YCEO INNER MEMBRANE STY1197 10 46 9.0E-13 T 09-03-2017 IPR024494 Protein of unknown function DUF2770 RG43_RS15280 211a27cb3f34b054f0b4865a49917e49 46 Pfam PF10968 Protein of unknown function (DUF2770) 10 45 1.7E-19 T 09-03-2017 IPR024494 Protein of unknown function DUF2770 RG43_RS10745 733023ee8d49c18e4233cf83efa534ed 104 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 68 84 2.6E-22 T 09-03-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 RG43_RS10745 733023ee8d49c18e4233cf83efa534ed 104 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 89 102 2.6E-22 T 09-03-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 RG43_RS10745 733023ee8d49c18e4233cf83efa534ed 104 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 33 49 2.6E-22 T 09-03-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 RG43_RS10745 733023ee8d49c18e4233cf83efa534ed 104 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 2 104 18.014 T 09-03-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 RG43_RS10745 733023ee8d49c18e4233cf83efa534ed 104 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 2 104 1.1E-42 T 09-03-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 RG43_RS10745 733023ee8d49c18e4233cf83efa534ed 104 Pfam PF02049 Flagellar hook-basal body complex protein FliE 18 104 6.8E-28 T 09-03-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 RG43_RS14245 77451768055b63cdca575a9faa3383a1 90 SUPERFAMILY SSF54060 18 87 2.12E-6 T 09-03-2017 RG43_RS14245 77451768055b63cdca575a9faa3383a1 90 Pfam PF13392 HNH endonuclease 52 88 1.4E-6 T 09-03-2017 IPR003615 HNH nuclease RG43_RS05605 c165f71559f8ba0a4f0bd555fe34c680 962 Gene3D G3DSA:3.30.830.10 274 506 9.9E-65 T 09-03-2017 IPR011237 Peptidase M16 domain GO:0046872 RG43_RS05605 c165f71559f8ba0a4f0bd555fe34c680 962 SUPERFAMILY SSF63411 33 261 7.14E-51 T 09-03-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RG43_RS05605 c165f71559f8ba0a4f0bd555fe34c680 962 Gene3D G3DSA:3.30.830.10 30 266 1.4E-63 T 09-03-2017 IPR011237 Peptidase M16 domain GO:0046872 RG43_RS05605 c165f71559f8ba0a4f0bd555fe34c680 962 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 75 98 - T 09-03-2017 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 RG43_RS05605 c165f71559f8ba0a4f0bd555fe34c680 962 SUPERFAMILY SSF63411 265 502 4.02E-66 T 09-03-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RG43_RS05605 c165f71559f8ba0a4f0bd555fe34c680 962 SUPERFAMILY SSF63411 735 957 4.19E-45 T 09-03-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RG43_RS05605 c165f71559f8ba0a4f0bd555fe34c680 962 Pfam PF05193 Peptidase M16 inactive domain 216 394 5.0E-21 T 09-03-2017 IPR007863 Peptidase M16, C-terminal RG43_RS05605 c165f71559f8ba0a4f0bd555fe34c680 962 Pfam PF05193 Peptidase M16 inactive domain 681 856 1.4E-14 T 09-03-2017 IPR007863 Peptidase M16, C-terminal RG43_RS05605 c165f71559f8ba0a4f0bd555fe34c680 962 Gene3D G3DSA:3.30.830.10 507 729 5.9E-67 T 09-03-2017 IPR011237 Peptidase M16 domain GO:0046872 RG43_RS05605 c165f71559f8ba0a4f0bd555fe34c680 962 Pfam PF00675 Insulinase (Peptidase family M16) 54 191 9.5E-39 T 09-03-2017 IPR011765 Peptidase M16, N-terminal RG43_RS05605 c165f71559f8ba0a4f0bd555fe34c680 962 Gene3D G3DSA:3.30.830.10 730 959 5.5E-61 T 09-03-2017 IPR011237 Peptidase M16 domain GO:0046872 RG43_RS05605 c165f71559f8ba0a4f0bd555fe34c680 962 Pfam PF16187 Middle or third domain of peptidase_M16 400 676 2.7E-54 T 09-03-2017 IPR032632 Peptidase M16, middle/third domain RG43_RS05605 c165f71559f8ba0a4f0bd555fe34c680 962 SUPERFAMILY SSF63411 504 728 2.79E-48 T 09-03-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RG43_RS19820 6a91a9d34b56bb51e1e98d0c3e9f65e8 133 SUPERFAMILY SSF143749 3 132 2.62E-51 T 09-03-2017 IPR009312 Minor tail protein U-like RG43_RS19820 6a91a9d34b56bb51e1e98d0c3e9f65e8 133 Pfam PF06141 Phage minor tail protein U 3 131 1.2E-48 T 09-03-2017 IPR009312 Minor tail protein U-like RG43_RS06185 4cbee0fbb692af5500d9bbdb486d45c8 420 SUPERFAMILY SSF142764 4 418 1.7E-130 T 09-03-2017 RG43_RS06185 4cbee0fbb692af5500d9bbdb486d45c8 420 Pfam PF07005 Putative sugar-binding N-terminal domain 4 227 1.7E-69 T 09-03-2017 IPR010737 Putative sugar-binding, N-terminal domain RG43_RS06185 4cbee0fbb692af5500d9bbdb486d45c8 420 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 253 411 6.1E-41 T 09-03-2017 IPR031475 Putative nucleotide-binding C-terminal domain RG43_RS09910 5c1ca08772fec1b8394f76687dcfd1bf 798 Gene3D G3DSA:3.40.50.300 48 126 9.1E-27 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS09910 5c1ca08772fec1b8394f76687dcfd1bf 798 Gene3D G3DSA:3.40.50.300 182 328 9.1E-27 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS09910 5c1ca08772fec1b8394f76687dcfd1bf 798 SUPERFAMILY SSF52540 50 122 1.4E-26 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS09910 5c1ca08772fec1b8394f76687dcfd1bf 798 SUPERFAMILY SSF52540 200 336 1.4E-26 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS09910 5c1ca08772fec1b8394f76687dcfd1bf 798 Pfam PF00350 Dynamin family 71 299 3.2E-18 T 09-03-2017 IPR022812 Dynamin superfamily RG43_RS16395 4fb854c5c2ec90452ef1710bbcd86acf 271 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 232 1.2E-19 T 09-03-2017 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 RG43_RS16395 4fb854c5c2ec90452ef1710bbcd86acf 271 ProSitePatterns PS01229 Hypothetical cof family signature 2. 213 235 - T 09-03-2017 RG43_RS16395 4fb854c5c2ec90452ef1710bbcd86acf 271 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 259 2.4E-57 T 09-03-2017 IPR000150 Cof protein GO:0016787 RG43_RS16395 4fb854c5c2ec90452ef1710bbcd86acf 271 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 259 1.0E-54 T 09-03-2017 IPR023214 HAD-like domain RG43_RS16395 4fb854c5c2ec90452ef1710bbcd86acf 271 SUPERFAMILY SSF56784 1 264 2.24E-63 T 09-03-2017 IPR023214 HAD-like domain RG43_RS16395 4fb854c5c2ec90452ef1710bbcd86acf 271 Gene3D G3DSA:3.40.50.1000 1 74 5.5E-47 T 09-03-2017 IPR023214 HAD-like domain RG43_RS16395 4fb854c5c2ec90452ef1710bbcd86acf 271 Gene3D G3DSA:3.40.50.1000 179 265 5.5E-47 T 09-03-2017 IPR023214 HAD-like domain RG43_RS16395 4fb854c5c2ec90452ef1710bbcd86acf 271 Gene3D G3DSA:3.30.1240.10 84 178 2.6E-33 T 09-03-2017 RG43_RS19240 d25d46a52067fa6a36817304f9da4f57 269 SUPERFAMILY SSF56529 1 259 8.9E-82 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RG43_RS19240 d25d46a52067fa6a36817304f9da4f57 269 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 77 259 2.3E-22 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RG43_RS19240 d25d46a52067fa6a36817304f9da4f57 269 Gene3D G3DSA:3.90.850.10 1 260 7.5E-95 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RG43_RS19240 d25d46a52067fa6a36817304f9da4f57 269 Hamap MF_01655 2-keto-4-pentenoate hydratase [mhpD]. 1 260 57.192 T 09-03-2017 IPR023793 2-keto-4-pentenoate hydratase GO:0008684|GO:0019439|GO:0030145 KEGG: 00360+4.2.1.80|KEGG: 00362+4.2.1.80|KEGG: 00621+4.2.1.80|KEGG: 00622+4.2.1.80|MetaCyc: PWY-5162 RG43_RS04945 4d99a4359439603bbf6b1db7ce7ddd38 433 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 20 427 4.3E-142 T 09-03-2017 IPR004681 TRAP transporter permease protein GO:0016021 RG43_RS04945 4d99a4359439603bbf6b1db7ce7ddd38 433 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 422 1.1E-113 T 09-03-2017 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RG43_RS04945 4d99a4359439603bbf6b1db7ce7ddd38 433 PIRSF PIRSF006066 4 433 2.8E-164 T 09-03-2017 IPR004681 TRAP transporter permease protein GO:0016021 RG43_RS26250 6eef03657d134c52e9725ddeea8523f6 205 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 184 4.7E-50 T 09-03-2017 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 RG43_RS26250 6eef03657d134c52e9725ddeea8523f6 205 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 18.447 T 09-03-2017 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 RG43_RS26250 6eef03657d134c52e9725ddeea8523f6 205 SMART SM01207 10 185 1.9E-86 T 09-03-2017 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 RG43_RS26250 6eef03657d134c52e9725ddeea8523f6 205 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 1 195 8.0E-83 T 09-03-2017 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 RG43_RS03875 6eef03657d134c52e9725ddeea8523f6 205 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 184 4.7E-50 T 09-03-2017 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 RG43_RS03875 6eef03657d134c52e9725ddeea8523f6 205 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 18.447 T 09-03-2017 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 RG43_RS03875 6eef03657d134c52e9725ddeea8523f6 205 SMART SM01207 10 185 1.9E-86 T 09-03-2017 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 RG43_RS03875 6eef03657d134c52e9725ddeea8523f6 205 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 1 195 8.0E-83 T 09-03-2017 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 RG43_RS03625 a8888950de5106b4e4a2e688ffba6fc1 438 Pfam PF00589 Phage integrase family 232 391 1.4E-9 T 09-03-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RG43_RS03625 a8888950de5106b4e4a2e688ffba6fc1 438 Gene3D G3DSA:1.10.150.130 114 217 6.5E-7 T 09-03-2017 IPR023109 Integrase/recombinase, N-terminal RG43_RS03625 a8888950de5106b4e4a2e688ffba6fc1 438 Pfam PF13356 Domain of unknown function (DUF4102) 5 97 7.3E-14 T 09-03-2017 IPR025166 Domain of unknown function DUF4102 RG43_RS03625 a8888950de5106b4e4a2e688ffba6fc1 438 SUPERFAMILY SSF56349 114 412 1.0E-36 T 09-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RG43_RS03625 a8888950de5106b4e4a2e688ffba6fc1 438 Gene3D G3DSA:1.10.443.10 232 405 2.9E-19 T 09-03-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RG43_RS04790 98dca645d3512b1a25327d0bf2084e92 523 Pfam PF13007 Transposase C of IS166 homeodomain 46 121 5.0E-12 T 09-03-2017 IPR024463 Transposase TnpC, homeodomain RG43_RS04790 98dca645d3512b1a25327d0bf2084e92 523 Pfam PF13005 zinc-finger binding domain of transposase IS66 128 172 1.2E-12 T 09-03-2017 IPR024474 Zinc-finger binding domain of transposase IS66 RG43_RS04790 98dca645d3512b1a25327d0bf2084e92 523 Pfam PF03050 Transposase IS66 family 187 472 2.7E-99 T 09-03-2017 IPR004291 Transposase, IS66 RG43_RS04790 98dca645d3512b1a25327d0bf2084e92 523 Pfam PF13817 IS66 C-terminal element 479 516 2.2E-16 T 09-03-2017 RG43_RS22795 812912794cc80a1be6472a871e11a1e4 41 Pfam PF08085 Entericidin EcnA/B family 20 40 1.8E-7 T 09-03-2017 IPR012556 Entericidin A/B GO:0009636|GO:0016020 RG43_RS16040 0f7490d45baddf54e20237a41e546b97 227 Gene3D G3DSA:3.40.50.300 6 221 2.4E-77 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16040 0f7490d45baddf54e20237a41e546b97 227 Pfam PF02224 Cytidylate kinase 8 221 4.1E-85 T 09-03-2017 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 RG43_RS16040 0f7490d45baddf54e20237a41e546b97 227 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 1.5E-97 T 09-03-2017 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 RG43_RS16040 0f7490d45baddf54e20237a41e546b97 227 SUPERFAMILY SSF52540 6 224 5.98E-49 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16040 0f7490d45baddf54e20237a41e546b97 227 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 34.523 T 09-03-2017 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 RG43_RS00675 82d218d455a27c5acdf11662265cd47e 155 Pfam PF02556 Preprotein translocase subunit SecB 5 144 6.3E-58 T 09-03-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RG43_RS00675 82d218d455a27c5acdf11662265cd47e 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 73 93 1.1E-41 T 09-03-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RG43_RS00675 82d218d455a27c5acdf11662265cd47e 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 13 30 1.1E-41 T 09-03-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RG43_RS00675 82d218d455a27c5acdf11662265cd47e 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 97 119 1.1E-41 T 09-03-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RG43_RS00675 82d218d455a27c5acdf11662265cd47e 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 123 141 1.1E-41 T 09-03-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RG43_RS00675 82d218d455a27c5acdf11662265cd47e 155 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 5 147 1.4E-71 T 09-03-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RG43_RS00675 82d218d455a27c5acdf11662265cd47e 155 Hamap MF_00821 Protein-export protein SecB [secB]. 1 145 33.552 T 09-03-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RG43_RS00675 82d218d455a27c5acdf11662265cd47e 155 Gene3D G3DSA:3.10.420.10 2 151 3.6E-65 T 09-03-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RG43_RS00675 82d218d455a27c5acdf11662265cd47e 155 SUPERFAMILY SSF54611 10 142 1.2E-53 T 09-03-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RG43_RS13800 16cd9453124bda0b3bee08cc0defe188 301 SUPERFAMILY SSF56935 247 301 8.97E-7 T 09-03-2017 RG43_RS13800 16cd9453124bda0b3bee08cc0defe188 301 SUPERFAMILY SSF56935 47 201 8.97E-7 T 09-03-2017 RG43_RS13800 16cd9453124bda0b3bee08cc0defe188 301 Gene3D G3DSA:2.40.160.40 22 301 3.1E-130 T 09-03-2017 RG43_RS13800 16cd9453124bda0b3bee08cc0defe188 301 Pfam PF09381 Outer membrane protein G (OmpG) 1 301 1.4E-219 T 09-03-2017 IPR018981 Outer membrane protein G RG43_RS21375 3881ad5b7c2165fb4a71b24003166e85 522 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 09-03-2017 IPR020845 AMP-binding, conserved site RG43_RS21375 3881ad5b7c2165fb4a71b24003166e85 522 Gene3D G3DSA:3.40.50.980 189 347 4.9E-33 T 09-03-2017 RG43_RS21375 3881ad5b7c2165fb4a71b24003166e85 522 Hamap MF_01524 Probable crotonobetaine/carnitine-CoA ligase [caiC]. 6 522 85.616 T 09-03-2017 IPR023456 Crotonobetaine/carnitine-CoA ligase CaiC GO:0009437|GO:0016878|GO:0051108|GO:0051109 RG43_RS21375 3881ad5b7c2165fb4a71b24003166e85 522 Gene3D G3DSA:3.30.300.30 428 522 1.3E-26 T 09-03-2017 RG43_RS21375 3881ad5b7c2165fb4a71b24003166e85 522 SUPERFAMILY SSF56801 14 522 6.67E-133 T 09-03-2017 RG43_RS21375 3881ad5b7c2165fb4a71b24003166e85 522 Pfam PF13193 AMP-binding enzyme C-terminal domain 440 515 7.8E-15 T 09-03-2017 IPR025110 AMP-binding enzyme C-terminal domain RG43_RS21375 3881ad5b7c2165fb4a71b24003166e85 522 Gene3D G3DSA:2.30.38.10 348 422 4.8E-23 T 09-03-2017 RG43_RS21375 3881ad5b7c2165fb4a71b24003166e85 522 Gene3D G3DSA:3.40.50.980 14 188 8.6E-39 T 09-03-2017 RG43_RS21375 3881ad5b7c2165fb4a71b24003166e85 522 Pfam PF00501 AMP-binding enzyme 22 431 1.8E-88 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RG43_RS17260 508cfe11b3004a702745c5bc8926ffb0 239 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 22 231 7.0E-75 T 09-03-2017 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 RG43_RS17260 508cfe11b3004a702745c5bc8926ffb0 239 Pfam PF04973 Nicotinamide mononucleotide transporter 23 226 5.8E-51 T 09-03-2017 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 RG43_RS03710 6a98ca3c7feefa434bdd22a97ce93f5b 92 Gene3D G3DSA:3.30.420.10 2 74 3.1E-13 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS03710 6a98ca3c7feefa434bdd22a97ce93f5b 92 Pfam PF00665 Integrase core domain 2 74 1.4E-8 T 09-03-2017 IPR001584 Integrase, catalytic core GO:0015074 RG43_RS03710 6a98ca3c7feefa434bdd22a97ce93f5b 92 SUPERFAMILY SSF53098 2 74 7.89E-13 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS02620 83478d1bc3b60323c554ded2589d0fda 341 SMART SM00062 36 265 2.3E-62 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RG43_RS02620 83478d1bc3b60323c554ded2589d0fda 341 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 253 2.0E-32 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RG43_RS02620 83478d1bc3b60323c554ded2589d0fda 341 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 59 72 - T 09-03-2017 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 RG43_RS02620 83478d1bc3b60323c554ded2589d0fda 341 SUPERFAMILY SSF53850 27 256 3.21E-49 T 09-03-2017 RG43_RS02620 83478d1bc3b60323c554ded2589d0fda 341 Gene3D G3DSA:3.40.190.10 225 251 4.1E-20 T 09-03-2017 RG43_RS02620 83478d1bc3b60323c554ded2589d0fda 341 Gene3D G3DSA:3.40.190.10 33 127 4.1E-20 T 09-03-2017 RG43_RS02620 83478d1bc3b60323c554ded2589d0fda 341 Gene3D G3DSA:3.40.190.10 128 224 7.5E-16 T 09-03-2017 RG43_RS01845 59172a2518464149c806e0e5a9e0d584 797 Gene3D G3DSA:3.40.50.2000 463 780 4.9E-136 T 09-03-2017 RG43_RS01845 59172a2518464149c806e0e5a9e0d584 797 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 638 650 - T 09-03-2017 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 RG43_RS01845 59172a2518464149c806e0e5a9e0d584 797 SUPERFAMILY SSF53756 8 795 1.88E-296 T 09-03-2017 RG43_RS01845 59172a2518464149c806e0e5a9e0d584 797 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 9 794 0.0 T 09-03-2017 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 RG43_RS01845 59172a2518464149c806e0e5a9e0d584 797 Gene3D G3DSA:3.40.50.2000 7 462 6.6E-184 T 09-03-2017 RG43_RS01845 59172a2518464149c806e0e5a9e0d584 797 Pfam PF00343 Carbohydrate phosphorylase 93 794 0.0 T 09-03-2017 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 RG43_RS01845 59172a2518464149c806e0e5a9e0d584 797 PIRSF PIRSF000460 1 797 7.3E-206 T 09-03-2017 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 RG43_RS23840 6f36873c25db9e71df1d9647fd80743a 316 Hamap MF_00215 Pantothenate kinase [coaA]. 1 316 191.095 T 09-03-2017 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 RG43_RS23840 6f36873c25db9e71df1d9647fd80743a 316 PIRSF PIRSF000545 1 316 7.1E-150 T 09-03-2017 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 RG43_RS23840 6f36873c25db9e71df1d9647fd80743a 316 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 10 316 5.5E-183 T 09-03-2017 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 RG43_RS23840 6f36873c25db9e71df1d9647fd80743a 316 Gene3D G3DSA:3.40.50.300 10 316 6.4E-112 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS23840 6f36873c25db9e71df1d9647fd80743a 316 SUPERFAMILY SSF52540 10 315 1.02E-79 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS23840 6f36873c25db9e71df1d9647fd80743a 316 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 90 245 2.2E-14 T 09-03-2017 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 RG43_RS02210 04826ee02de2e8ea82315341ca3f5b4e 66 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 3 60 6.1E-32 T 09-03-2017 IPR012658 Conserved hypothetical protein CHP02443 RG43_RS02210 04826ee02de2e8ea82315341ca3f5b4e 66 Pfam PF09526 Probable metal-binding protein (DUF2387) 4 54 2.5E-18 T 09-03-2017 IPR012658 Conserved hypothetical protein CHP02443 RG43_RS15145 597ff3bfb57e6e764bf6ec6b32d26dbb 112 SUPERFAMILY SSF47598 25 102 3.48E-22 T 09-03-2017 IPR010985 Ribbon-helix-helix GO:0006355 RG43_RS15145 597ff3bfb57e6e764bf6ec6b32d26dbb 112 Pfam PF08681 Protein of unknown function (DUF1778) 29 103 1.6E-25 T 09-03-2017 IPR014795 Vibrio phage ICP1, Orf50 RG43_RS15145 597ff3bfb57e6e764bf6ec6b32d26dbb 112 Gene3D G3DSA:1.20.5.780 26 103 2.8E-19 T 09-03-2017 RG43_RS21530 76c455e312bbc25a609543bc830a44a2 310 SUPERFAMILY SSF54211 1 162 2.2E-32 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold RG43_RS21530 76c455e312bbc25a609543bc830a44a2 310 PRINTS PR00958 Homoserine kinase signature 97 112 3.7E-34 T 09-03-2017 RG43_RS21530 76c455e312bbc25a609543bc830a44a2 310 PRINTS PR00958 Homoserine kinase signature 254 269 3.7E-34 T 09-03-2017 RG43_RS21530 76c455e312bbc25a609543bc830a44a2 310 PRINTS PR00958 Homoserine kinase signature 9 24 3.7E-34 T 09-03-2017 RG43_RS21530 76c455e312bbc25a609543bc830a44a2 310 PRINTS PR00958 Homoserine kinase signature 137 150 3.7E-34 T 09-03-2017 RG43_RS21530 76c455e312bbc25a609543bc830a44a2 310 PRINTS PR00958 Homoserine kinase signature 175 192 3.7E-34 T 09-03-2017 RG43_RS21530 76c455e312bbc25a609543bc830a44a2 310 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 90 101 - T 09-03-2017 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 RG43_RS21530 76c455e312bbc25a609543bc830a44a2 310 Hamap MF_00384 Homoserine kinase [thrB]. 2 307 31.0 T 09-03-2017 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 RG43_RS21530 76c455e312bbc25a609543bc830a44a2 310 Pfam PF00288 GHMP kinases N terminal domain 85 150 7.1E-14 T 09-03-2017 IPR006204 GHMP kinase N-terminal domain GO:0005524 RG43_RS21530 76c455e312bbc25a609543bc830a44a2 310 TIGRFAM TIGR00191 thrB: homoserine kinase 2 309 1.3E-122 T 09-03-2017 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 RG43_RS21530 76c455e312bbc25a609543bc830a44a2 310 Gene3D G3DSA:3.30.70.890 169 298 6.3E-41 T 09-03-2017 IPR013750 GHMP kinase, C-terminal domain RG43_RS21530 76c455e312bbc25a609543bc830a44a2 310 SUPERFAMILY SSF55060 172 289 2.88E-33 T 09-03-2017 IPR013750 GHMP kinase, C-terminal domain RG43_RS21530 76c455e312bbc25a609543bc830a44a2 310 Pfam PF08544 GHMP kinases C terminal 212 281 6.6E-10 T 09-03-2017 IPR013750 GHMP kinase, C-terminal domain RG43_RS21530 76c455e312bbc25a609543bc830a44a2 310 PIRSF PIRSF000676 1 310 4.1E-87 T 09-03-2017 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 RG43_RS21530 76c455e312bbc25a609543bc830a44a2 310 Gene3D G3DSA:3.30.230.10 1 164 2.6E-51 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RG43_RS21080 54e611311e0e2a239edc3e7c5749607a 306 Gene3D G3DSA:3.40.50.20 3 84 7.3E-28 T 09-03-2017 IPR016185 Pre-ATP-grasp domain RG43_RS21080 54e611311e0e2a239edc3e7c5749607a 306 SUPERFAMILY SSF56059 97 302 4.38E-57 T 09-03-2017 RG43_RS21080 54e611311e0e2a239edc3e7c5749607a 306 PIRSF PIRSF039102 37 306 5.9E-100 T 09-03-2017 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RG43_RS21080 54e611311e0e2a239edc3e7c5749607a 306 Pfam PF01820 D-ala D-ala ligase N-terminus 4 86 6.4E-21 T 09-03-2017 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RG43_RS21080 54e611311e0e2a239edc3e7c5749607a 306 Gene3D G3DSA:3.30.470.20 85 103 7.7E-53 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RG43_RS21080 54e611311e0e2a239edc3e7c5749607a 306 Gene3D G3DSA:3.30.470.20 181 305 7.7E-53 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RG43_RS21080 54e611311e0e2a239edc3e7c5749607a 306 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 4 305 1.5E-112 T 09-03-2017 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RG43_RS21080 54e611311e0e2a239edc3e7c5749607a 306 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 63 74 - T 09-03-2017 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RG43_RS21080 54e611311e0e2a239edc3e7c5749607a 306 Gene3D G3DSA:3.30.1490.20 107 180 2.1E-26 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RG43_RS21080 54e611311e0e2a239edc3e7c5749607a 306 SUPERFAMILY SSF52440 3 96 1.63E-29 T 09-03-2017 IPR016185 Pre-ATP-grasp domain RG43_RS21080 54e611311e0e2a239edc3e7c5749607a 306 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 248 276 - T 09-03-2017 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RG43_RS21080 54e611311e0e2a239edc3e7c5749607a 306 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 306 36.485 T 09-03-2017 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RG43_RS21080 54e611311e0e2a239edc3e7c5749607a 306 Pfam PF07478 D-ala D-ala ligase C-terminus 103 303 1.5E-72 T 09-03-2017 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RG43_RS11980 768623cc27d38be0e8b09220925af0b7 463 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 2.1E-27 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RG43_RS11980 768623cc27d38be0e8b09220925af0b7 463 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 2.1E-27 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RG43_RS11980 768623cc27d38be0e8b09220925af0b7 463 PRINTS PR00173 Glutamate-aspartate symporter signature 182 204 2.1E-27 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RG43_RS11980 768623cc27d38be0e8b09220925af0b7 463 PRINTS PR00173 Glutamate-aspartate symporter signature 397 417 2.1E-27 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RG43_RS11980 768623cc27d38be0e8b09220925af0b7 463 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 2.1E-27 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RG43_RS11980 768623cc27d38be0e8b09220925af0b7 463 PRINTS PR00173 Glutamate-aspartate symporter signature 370 389 2.1E-27 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RG43_RS11980 768623cc27d38be0e8b09220925af0b7 463 Gene3D G3DSA:1.10.3860.10 23 449 8.8E-103 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RG43_RS11980 768623cc27d38be0e8b09220925af0b7 463 SUPERFAMILY SSF118215 29 443 3.14E-98 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RG43_RS11980 768623cc27d38be0e8b09220925af0b7 463 Pfam PF00375 Sodium:dicarboxylate symporter family 29 443 3.8E-104 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RG43_RS18185 b3b2f21bbaaa1f30392c4a23ac5311b9 62 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 13 61 1.0E-20 T 09-03-2017 IPR000021 Hok/gef cell toxic protein GO:0016020 RG43_RS18185 b3b2f21bbaaa1f30392c4a23ac5311b9 62 Pfam PF01848 Hok/gef family 17 58 8.2E-17 T 09-03-2017 IPR000021 Hok/gef cell toxic protein GO:0016020 RG43_RS18185 b3b2f21bbaaa1f30392c4a23ac5311b9 62 ProSitePatterns PS00556 Hok/gef family cell toxic proteins signature. 22 41 - T 09-03-2017 IPR018084 Hok/gef cell toxic protein, conserved site GO:0016020 RG43_RS18185 b3b2f21bbaaa1f30392c4a23ac5311b9 62 PRINTS PR00281 Hok/Gef cell toxic protein family signature 37 59 3.7E-11 T 09-03-2017 IPR000021 Hok/gef cell toxic protein GO:0016020 RG43_RS18185 b3b2f21bbaaa1f30392c4a23ac5311b9 62 PRINTS PR00281 Hok/Gef cell toxic protein family signature 17 35 3.7E-11 T 09-03-2017 IPR000021 Hok/gef cell toxic protein GO:0016020 RG43_RS24230 c959585f6260088ae6486013d5b0e215 172 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 3 172 3.5E-50 T 09-03-2017 IPR006498 Tail tube protein RG43_RS24230 c959585f6260088ae6486013d5b0e215 172 Pfam PF04985 Phage tail tube protein FII 4 171 7.5E-63 T 09-03-2017 IPR006498 Tail tube protein RG43_RS17170 5adfc32c620373e38308e89f4358b1d3 331 Gene3D G3DSA:2.130.10.10 2 328 1.1E-80 T 09-03-2017 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RG43_RS17170 5adfc32c620373e38308e89f4358b1d3 331 Hamap MF_01605 6-phosphogluconolactonase [pgl]. 1 331 56.289 T 09-03-2017 IPR022528 6-phosphogluconolactonase, YbhE-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 RG43_RS17170 5adfc32c620373e38308e89f4358b1d3 331 SUPERFAMILY SSF50974 3 292 9.94E-53 T 09-03-2017 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 RG43_RS17170 5adfc32c620373e38308e89f4358b1d3 331 Pfam PF10282 Lactonase, 7-bladed beta-propeller 5 327 1.2E-87 T 09-03-2017 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31 RG43_RS00540 a0b650a69e48f30eb13ab1c5341358bb 222 SUPERFAMILY SSF47781 17 85 4.0E-8 T 09-03-2017 IPR010994 RuvA domain 2-like RG43_RS00540 a0b650a69e48f30eb13ab1c5341358bb 222 Pfam PF04002 RadC-like JAB domain 103 220 1.6E-43 T 09-03-2017 IPR025657 RadC-like JAB domain RG43_RS00540 a0b650a69e48f30eb13ab1c5341358bb 222 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 171 176 - T 09-03-2017 IPR020891 Uncharacterised protein family UPF0758, conserved site RG43_RS00540 a0b650a69e48f30eb13ab1c5341358bb 222 TIGRFAM TIGR00608 radc: DNA repair protein RadC 9 222 1.8E-96 T 09-03-2017 IPR001405 RadC protein RG43_RS00540 a0b650a69e48f30eb13ab1c5341358bb 222 Gene3D G3DSA:3.40.140.10 99 222 3.3E-49 T 09-03-2017 RG43_RS00540 a0b650a69e48f30eb13ab1c5341358bb 222 Hamap MF_00018 UPF0758 protein YicR [yicR]. 2 222 53.548 T 09-03-2017 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily RG43_RS03260 135508bea4e52908ac79bdb356013219 267 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 2 267 5.0E-124 T 09-03-2017 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 RG43_RS03260 135508bea4e52908ac79bdb356013219 267 Pfam PF03609 PTS system sorbose-specific iic component 7 238 3.1E-65 T 09-03-2017 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 RG43_RS21465 6f115f83682d28c28310227aa33a57c8 69 ProSitePatterns PS00556 Hok/gef family cell toxic proteins signature. 30 49 - T 09-03-2017 IPR018084 Hok/gef cell toxic protein, conserved site GO:0016020 RG43_RS21465 6f115f83682d28c28310227aa33a57c8 69 PRINTS PR00281 Hok/Gef cell toxic protein family signature 45 67 1.2E-13 T 09-03-2017 IPR000021 Hok/gef cell toxic protein GO:0016020 RG43_RS21465 6f115f83682d28c28310227aa33a57c8 69 PRINTS PR00281 Hok/Gef cell toxic protein family signature 25 43 1.2E-13 T 09-03-2017 IPR000021 Hok/gef cell toxic protein GO:0016020 RG43_RS21465 6f115f83682d28c28310227aa33a57c8 69 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 24 68 1.0E-5 T 09-03-2017 IPR000021 Hok/gef cell toxic protein GO:0016020 RG43_RS21465 6f115f83682d28c28310227aa33a57c8 69 Pfam PF01848 Hok/gef family 25 66 1.0E-20 T 09-03-2017 IPR000021 Hok/gef cell toxic protein GO:0016020 RG43_RS23960 199f31ee75f7faf6bf698d13c3594995 883 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 883 3.2E-295 T 09-03-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RG43_RS23960 199f31ee75f7faf6bf698d13c3594995 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 709 735 1.3E-68 T 09-03-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RG43_RS23960 199f31ee75f7faf6bf698d13c3594995 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 577 606 1.3E-68 T 09-03-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RG43_RS23960 199f31ee75f7faf6bf698d13c3594995 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 245 260 1.3E-68 T 09-03-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RG43_RS23960 199f31ee75f7faf6bf698d13c3594995 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 386 406 1.3E-68 T 09-03-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RG43_RS23960 199f31ee75f7faf6bf698d13c3594995 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 535 555 1.3E-68 T 09-03-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RG43_RS23960 199f31ee75f7faf6bf698d13c3594995 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 1.3E-68 T 09-03-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RG43_RS23960 199f31ee75f7faf6bf698d13c3594995 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 1.3E-68 T 09-03-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RG43_RS23960 199f31ee75f7faf6bf698d13c3594995 883 SUPERFAMILY SSF51621 6 883 0.0 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RG43_RS23960 199f31ee75f7faf6bf698d13c3594995 883 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 883 18.495 T 09-03-2017 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RG43_RS23960 199f31ee75f7faf6bf698d13c3594995 883 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 09-03-2017 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RG43_RS23960 199f31ee75f7faf6bf698d13c3594995 883 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 537 549 - T 09-03-2017 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RG43_RS23960 199f31ee75f7faf6bf698d13c3594995 883 Gene3D G3DSA:1.20.1440.90 273 388 1.3E-32 T 09-03-2017 RG43_RS13395 2265bdcd548fb27e94f53532d6e0c6c3 468 SUPERFAMILY SSF53383 91 466 1.61E-92 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS13395 2265bdcd548fb27e94f53532d6e0c6c3 468 SUPERFAMILY SSF46785 2 70 4.45E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS13395 2265bdcd548fb27e94f53532d6e0c6c3 468 SMART SM00345 7 66 1.4E-14 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS13395 2265bdcd548fb27e94f53532d6e0c6c3 468 Pfam PF00155 Aminotransferase class I and II 145 445 3.9E-31 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RG43_RS13395 2265bdcd548fb27e94f53532d6e0c6c3 468 Gene3D G3DSA:1.10.10.10 1 67 1.6E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS13395 2265bdcd548fb27e94f53532d6e0c6c3 468 Gene3D G3DSA:3.40.640.10 144 356 2.0E-70 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS13395 2265bdcd548fb27e94f53532d6e0c6c3 468 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 7.8E-14 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RG43_RS19740 03ddb941ec5f7556890ce78365da94d2 99 Pfam PF01527 Transposase 12 78 5.6E-9 T 09-03-2017 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RG43_RS19740 03ddb941ec5f7556890ce78365da94d2 99 SUPERFAMILY SSF46689 11 96 6.45E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS19740 03ddb941ec5f7556890ce78365da94d2 99 Gene3D G3DSA:1.10.10.60 16 93 5.2E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS18990 bab745c09ee80710ad1f5407e19f9037 439 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 415 1.5E-165 T 09-03-2017 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 RG43_RS18990 bab745c09ee80710ad1f5407e19f9037 439 Pfam PF05525 Branched-chain amino acid transport protein 8 429 9.2E-161 T 09-03-2017 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 RG43_RS10610 3dc9d6727dc81f6da74c464ca442714a 231 SUPERFAMILY SSF109604 1 214 1.54E-62 T 09-03-2017 RG43_RS10610 3dc9d6727dc81f6da74c464ca442714a 231 SMART SM00471 22 141 1.4E-9 T 09-03-2017 IPR003607 HD/PDEase domain RG43_RS10610 3dc9d6727dc81f6da74c464ca442714a 231 Pfam PF01966 HD domain 28 131 1.6E-15 T 09-03-2017 IPR006674 HD domain RG43_RS10610 3dc9d6727dc81f6da74c464ca442714a 231 Gene3D G3DSA:1.10.3210.10 184 214 2.2E-45 T 09-03-2017 IPR006674 HD domain RG43_RS10610 3dc9d6727dc81f6da74c464ca442714a 231 Gene3D G3DSA:1.10.3210.10 2 145 2.2E-45 T 09-03-2017 IPR006674 HD domain RG43_RS00895 c4c09f6a7f36ed0dff06ea0d21b0c7cb 392 Gene3D G3DSA:3.40.50.2300 111 277 7.9E-29 T 09-03-2017 RG43_RS00895 c4c09f6a7f36ed0dff06ea0d21b0c7cb 392 SUPERFAMILY SSF46689 338 385 3.12E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS00895 c4c09f6a7f36ed0dff06ea0d21b0c7cb 392 SMART SM00342 301 384 1.2E-30 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS00895 c4c09f6a7f36ed0dff06ea0d21b0c7cb 392 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 338 380 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RG43_RS00895 c4c09f6a7f36ed0dff06ea0d21b0c7cb 392 Gene3D G3DSA:1.10.10.60 338 385 1.1E-15 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS00895 c4c09f6a7f36ed0dff06ea0d21b0c7cb 392 Pfam PF13377 Periplasmic binding protein-like domain 113 277 2.4E-37 T 09-03-2017 RG43_RS00895 c4c09f6a7f36ed0dff06ea0d21b0c7cb 392 SUPERFAMILY SSF53822 10 298 4.71E-46 T 09-03-2017 IPR028082 Periplasmic binding protein-like I RG43_RS00895 c4c09f6a7f36ed0dff06ea0d21b0c7cb 392 Pfam PF12833 Helix-turn-helix domain 309 384 2.6E-19 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS00895 c4c09f6a7f36ed0dff06ea0d21b0c7cb 392 Gene3D G3DSA:1.10.10.60 283 335 2.4E-11 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS00895 c4c09f6a7f36ed0dff06ea0d21b0c7cb 392 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 353 368 6.5E-6 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RG43_RS00895 c4c09f6a7f36ed0dff06ea0d21b0c7cb 392 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 368 384 6.5E-6 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RG43_RS00895 c4c09f6a7f36ed0dff06ea0d21b0c7cb 392 SUPERFAMILY SSF46689 284 333 3.86E-6 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS00895 c4c09f6a7f36ed0dff06ea0d21b0c7cb 392 Gene3D G3DSA:3.40.50.2300 57 110 8.0E-4 T 09-03-2017 RG43_RS07445 3a2450c2de40be96340f977468aec7d9 667 ProSitePatterns PS00802 Transketolase signature 2. 466 482 - T 09-03-2017 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 RG43_RS07445 3a2450c2de40be96340f977468aec7d9 667 Pfam PF02779 Transketolase, pyrimidine binding domain 353 523 2.4E-46 T 09-03-2017 IPR005475 Transketolase-like, pyrimidine-binding domain RG43_RS07445 3a2450c2de40be96340f977468aec7d9 667 TIGRFAM TIGR00232 tktlase_bact: transketolase 4 662 0.0 T 09-03-2017 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 RG43_RS07445 3a2450c2de40be96340f977468aec7d9 667 Pfam PF02780 Transketolase, C-terminal domain 539 654 2.2E-20 T 09-03-2017 IPR033248 Transketolase, C-terminal domain RG43_RS07445 3a2450c2de40be96340f977468aec7d9 667 Gene3D G3DSA:3.40.50.970 326 532 1.2E-79 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS07445 3a2450c2de40be96340f977468aec7d9 667 Gene3D G3DSA:3.40.50.970 4 320 4.0E-132 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS07445 3a2450c2de40be96340f977468aec7d9 667 SMART SM00861 354 524 2.5E-66 T 09-03-2017 IPR005475 Transketolase-like, pyrimidine-binding domain RG43_RS07445 3a2450c2de40be96340f977468aec7d9 667 SUPERFAMILY SSF52518 332 525 4.26E-68 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS07445 3a2450c2de40be96340f977468aec7d9 667 SUPERFAMILY SSF52518 4 320 6.96E-120 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS07445 3a2450c2de40be96340f977468aec7d9 667 ProSitePatterns PS00801 Transketolase signature 1. 11 31 - T 09-03-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 RG43_RS07445 3a2450c2de40be96340f977468aec7d9 667 Gene3D G3DSA:3.40.50.920 537 662 2.3E-49 T 09-03-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RG43_RS07445 3a2450c2de40be96340f977468aec7d9 667 SUPERFAMILY SSF52922 532 663 1.57E-43 T 09-03-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RG43_RS07445 3a2450c2de40be96340f977468aec7d9 667 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 3 333 5.1E-172 T 09-03-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 RG43_RS09370 124c6ffa0fb608b2f175247458f097f9 150 Gene3D G3DSA:3.40.930.10 9 134 1.1E-31 T 09-03-2017 IPR002178 PTS EIIA type-2 domain RG43_RS09370 124c6ffa0fb608b2f175247458f097f9 150 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 10 136 4.0E-22 T 09-03-2017 IPR002178 PTS EIIA type-2 domain RG43_RS09370 124c6ffa0fb608b2f175247458f097f9 150 SUPERFAMILY SSF55804 6 143 2.75E-27 T 09-03-2017 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 RG43_RS08020 494b555cffaad8e923c175e6fb7be9a4 63 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 5 53 3.3E-18 T 09-03-2017 IPR010260 Prophage CP4-57 regulatory protein (AlpA) RG43_RS11530 47db7125f51b03a68b3081b13ec28e24 152 Pfam PF06173 Protein of unknown function (DUF986) 4 150 4.8E-62 T 09-03-2017 IPR009328 Protein of unknown function DUF986 RG43_RS11530 47db7125f51b03a68b3081b13ec28e24 152 Hamap MF_01071 UPF0266 membrane protein YobD [yobD]. 1 152 32.437 T 09-03-2017 IPR009328 Protein of unknown function DUF986 RG43_RS11530 47db7125f51b03a68b3081b13ec28e24 152 PIRSF PIRSF020687 1 152 5.1E-69 T 09-03-2017 IPR009328 Protein of unknown function DUF986 RG43_RS11530 47db7125f51b03a68b3081b13ec28e24 152 ProDom PD091196 MEMBRANE UPF0266 TRANSMEMBRANE INNER YOBD PLU2700 LMO0779 PM0830 YPO1755/Y2554/YP1637 LIN0773 21 148 3.0E-69 T 09-03-2017 IPR009328 Protein of unknown function DUF986 RG43_RS21220 1efc011c87f10d10e62cbc9a04f61013 254 Pfam PF09335 SNARE associated Golgi protein 36 159 1.5E-18 T 09-03-2017 IPR032816 SNARE associated Golgi protein RG43_RS17585 44cb3ab788baf3340f1d1dc1a8b0a3c2 66 Pfam PF08786 Domain of unknown function (DUF1795) 2 53 1.1E-8 T 09-03-2017 IPR014894 Protein DcrB RG43_RS17585 44cb3ab788baf3340f1d1dc1a8b0a3c2 66 SUPERFAMILY SSF55724 2 58 7.85E-11 T 09-03-2017 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich Reactome: R-HSA-5576892 RG43_RS17585 44cb3ab788baf3340f1d1dc1a8b0a3c2 66 Gene3D G3DSA:3.40.1000.10 2 61 3.3E-13 T 09-03-2017 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich Reactome: R-HSA-5576892 RG43_RS06715 56a38ea72f0be578bfef7f17b93bd275 113 Gene3D G3DSA:3.30.160.100 3 91 1.2E-32 T 09-03-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RG43_RS06715 56a38ea72f0be578bfef7f17b93bd275 113 SUPERFAMILY SSF69754 3 111 8.37E-34 T 09-03-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RG43_RS06715 56a38ea72f0be578bfef7f17b93bd275 113 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 97 7.1E-36 T 09-03-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RG43_RS06715 56a38ea72f0be578bfef7f17b93bd275 113 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 91 7.2E-22 T 09-03-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RG43_RS14485 bfb7c5e864fd9ae629281b04584660ce 130 Pfam PF04247 Invasion gene expression up-regulator, SirB 6 127 1.3E-34 T 09-03-2017 IPR007360 Invasion gene expression up-regulator, SirB RG43_RS14485 bfb7c5e864fd9ae629281b04584660ce 130 PIRSF PIRSF005610 1 125 9.1E-19 T 09-03-2017 IPR007360 Invasion gene expression up-regulator, SirB RG43_RS05995 8b18a6f608c215497c65a00a4ece2663 286 SUPERFAMILY SSF52467 164 280 2.44E-28 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain RG43_RS05995 8b18a6f608c215497c65a00a4ece2663 286 Pfam PF01012 Electron transfer flavoprotein domain 41 127 1.2E-5 T 09-03-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 RG43_RS05995 8b18a6f608c215497c65a00a4ece2663 286 Gene3D G3DSA:3.40.50.620 2 155 4.3E-15 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS05995 8b18a6f608c215497c65a00a4ece2663 286 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 165 244 4.4E-16 T 09-03-2017 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 RG43_RS05995 8b18a6f608c215497c65a00a4ece2663 286 Gene3D G3DSA:3.40.50.1220 161 281 4.6E-32 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain RG43_RS05995 8b18a6f608c215497c65a00a4ece2663 286 PIRSF PIRSF000089 1 286 9.5E-64 T 09-03-2017 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 RG43_RS05995 8b18a6f608c215497c65a00a4ece2663 286 SUPERFAMILY SSF52402 3 141 3.77E-9 T 09-03-2017 RG43_RS07380 02c7d59b5893ec0e8075165f9ee518e7 132 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 4 130 13.588 T 09-03-2017 IPR022907 VapC family GO:0004540 RG43_RS07380 02c7d59b5893ec0e8075165f9ee518e7 132 Gene3D G3DSA:3.40.50.1010 3 132 5.0E-34 T 09-03-2017 IPR029060 PIN domain-like RG43_RS07380 02c7d59b5893ec0e8075165f9ee518e7 132 SUPERFAMILY SSF88723 1 131 1.6E-36 T 09-03-2017 IPR029060 PIN domain-like RG43_RS07380 02c7d59b5893ec0e8075165f9ee518e7 132 Pfam PF01850 PIN domain 5 125 7.5E-17 T 09-03-2017 IPR002716 PIN domain RG43_RS13850 ef9cd46d7bc8860273c40525d95cee39 559 SUPERFAMILY SSF51445 397 521 1.06E-76 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily RG43_RS13850 ef9cd46d7bc8860273c40525d95cee39 559 SUPERFAMILY SSF51445 44 357 1.06E-76 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily RG43_RS13850 ef9cd46d7bc8860273c40525d95cee39 559 SMART SM00642 48 480 4.0E-6 T 09-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RG43_RS13850 ef9cd46d7bc8860273c40525d95cee39 559 Gene3D G3DSA:3.20.20.80 209 481 5.6E-110 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RG43_RS13850 ef9cd46d7bc8860273c40525d95cee39 559 Gene3D G3DSA:3.20.20.80 46 133 5.6E-110 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RG43_RS13850 ef9cd46d7bc8860273c40525d95cee39 559 Gene3D G3DSA:2.60.40.1180 492 559 4.4E-22 T 09-03-2017 IPR013780 Glycosyl hydrolase, all-beta RG43_RS13850 ef9cd46d7bc8860273c40525d95cee39 559 Pfam PF00128 Alpha amylase, catalytic domain 83 338 6.2E-19 T 09-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RG43_RS13850 ef9cd46d7bc8860273c40525d95cee39 559 PIRSF PIRSF003059 2 559 6.5E-221 T 09-03-2017 IPR016377 Sucrose phosphorylase GO:0005985|GO:0009018 KEGG: 00500+2.4.1.7|MetaCyc: PWY-5384 RG43_RS13850 ef9cd46d7bc8860273c40525d95cee39 559 Gene3D G3DSA:3.90.400.10 134 203 5.1E-24 T 09-03-2017 RG43_RS15275 9780d0928152c3a307778465b338c924 372 Hamap MF_00515 N-methyl-L-tryptophan oxidase [solA]. 1 372 76.013 T 09-03-2017 IPR023493 N-methyl-L-tryptophan oxidase MTOX GO:0050131|GO:0050660|GO:0055114 RG43_RS15275 9780d0928152c3a307778465b338c924 372 SUPERFAMILY SSF54373 213 314 4.71E-17 T 09-03-2017 RG43_RS15275 9780d0928152c3a307778465b338c924 372 Pfam PF01266 FAD dependent oxidoreductase 4 352 1.4E-44 T 09-03-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RG43_RS15275 9780d0928152c3a307778465b338c924 372 Gene3D G3DSA:3.50.50.60 317 372 8.2E-57 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS15275 9780d0928152c3a307778465b338c924 372 Gene3D G3DSA:3.50.50.60 147 209 8.2E-57 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS15275 9780d0928152c3a307778465b338c924 372 Gene3D G3DSA:3.50.50.60 1 57 8.2E-57 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS15275 9780d0928152c3a307778465b338c924 372 Gene3D G3DSA:3.30.9.10 212 314 6.7E-53 T 09-03-2017 RG43_RS15275 9780d0928152c3a307778465b338c924 372 Gene3D G3DSA:3.30.9.10 59 146 6.7E-53 T 09-03-2017 RG43_RS15275 9780d0928152c3a307778465b338c924 372 SUPERFAMILY SSF51905 2 217 2.14E-48 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS15275 9780d0928152c3a307778465b338c924 372 SUPERFAMILY SSF51905 314 371 2.14E-48 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS13935 517b4e13af85faaf3f48c92309cee14f 321 Gene3D G3DSA:1.10.3720.10 181 305 1.8E-22 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS13935 517b4e13af85faaf3f48c92309cee14f 321 Gene3D G3DSA:1.10.3720.10 72 141 1.8E-22 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS13935 517b4e13af85faaf3f48c92309cee14f 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 311 2.7E-44 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS13935 517b4e13af85faaf3f48c92309cee14f 321 SUPERFAMILY SSF161098 72 138 4.32E-23 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS13935 517b4e13af85faaf3f48c92309cee14f 321 SUPERFAMILY SSF161098 178 300 4.32E-23 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS12480 2b1640b515824ed518d0b62beef78d1c 500 SUPERFAMILY SSF103473 15 212 4.97E-30 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS12480 2b1640b515824ed518d0b62beef78d1c 500 SUPERFAMILY SSF103473 257 490 4.97E-30 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS12480 2b1640b515824ed518d0b62beef78d1c 500 Hamap MF_01878 Dipeptide and tripeptide permease A [dtpA]. 1 489 49.555 T 09-03-2017 IPR023517 Amino acid/peptide transporter family, dipeptide and tripeptide permease A GO:0006857|GO:0015197|GO:0016020 RG43_RS12480 2b1640b515824ed518d0b62beef78d1c 500 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 17 485 8.3E-139 T 09-03-2017 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 RG43_RS12480 2b1640b515824ed518d0b62beef78d1c 500 Pfam PF00854 POT family 89 447 3.9E-94 T 09-03-2017 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 RG43_RS12480 2b1640b515824ed518d0b62beef78d1c 500 Gene3D G3DSA:1.20.1250.20 21 202 1.1E-17 T 09-03-2017 RG43_RS12480 2b1640b515824ed518d0b62beef78d1c 500 Gene3D G3DSA:1.20.1250.20 274 487 3.4E-9 T 09-03-2017 RG43_RS12480 2b1640b515824ed518d0b62beef78d1c 500 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 152 164 - T 09-03-2017 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 RG43_RS12480 2b1640b515824ed518d0b62beef78d1c 500 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 77 101 - T 09-03-2017 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 RG43_RS24515 a9b4b96f239a8b351eceaea05a57d7f7 464 Pfam PF16966 Porin-like glycoporin RafY 104 464 5.0E-168 T 09-03-2017 IPR016963 Glycoporin RafY RG43_RS24515 a9b4b96f239a8b351eceaea05a57d7f7 464 PIRSF PIRSF030989 2 464 1.7E-272 T 09-03-2017 IPR016963 Glycoporin RafY RG43_RS24515 a9b4b96f239a8b351eceaea05a57d7f7 464 SUPERFAMILY SSF56935 101 461 3.53E-7 T 09-03-2017 RG43_RS24515 a9b4b96f239a8b351eceaea05a57d7f7 464 Pfam PF11471 Maltoporin periplasmic N-terminal extension 1 54 7.7E-14 T 09-03-2017 IPR021570 LamB-type porin N-terminal domain RG43_RS01735 f1dee98dc68e3f06069a54029dbd5aa2 431 Pfam PF00483 Nucleotidyl transferase 22 291 3.2E-69 T 09-03-2017 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 RG43_RS01735 f1dee98dc68e3f06069a54029dbd5aa2 431 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 26 45 - T 09-03-2017 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 RG43_RS01735 f1dee98dc68e3f06069a54029dbd5aa2 431 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 211 221 - T 09-03-2017 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 RG43_RS01735 f1dee98dc68e3f06069a54029dbd5aa2 431 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 17 423 52.812 T 09-03-2017 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 RG43_RS01735 f1dee98dc68e3f06069a54029dbd5aa2 431 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 21 397 4.2E-157 T 09-03-2017 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 RG43_RS01735 f1dee98dc68e3f06069a54029dbd5aa2 431 SUPERFAMILY SSF53448 378 393 7.72E-78 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS01735 f1dee98dc68e3f06069a54029dbd5aa2 431 SUPERFAMILY SSF53448 20 294 7.72E-78 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS01735 f1dee98dc68e3f06069a54029dbd5aa2 431 Gene3D G3DSA:3.90.550.10 344 386 2.6E-78 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS01735 f1dee98dc68e3f06069a54029dbd5aa2 431 Gene3D G3DSA:3.90.550.10 22 301 2.6E-78 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS01735 f1dee98dc68e3f06069a54029dbd5aa2 431 SUPERFAMILY SSF51161 313 411 2.65E-18 T 09-03-2017 IPR011004 Trimeric LpxA-like RG43_RS01735 f1dee98dc68e3f06069a54029dbd5aa2 431 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 113 121 - T 09-03-2017 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 RG43_RS19255 3c4820c391f97bbcf9781d3fe1703cd6 554 Gene3D G3DSA:3.50.50.60 15 192 7.0E-54 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS19255 3c4820c391f97bbcf9781d3fe1703cd6 554 Gene3D G3DSA:3.50.50.60 275 355 7.0E-54 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS19255 3c4820c391f97bbcf9781d3fe1703cd6 554 SUPERFAMILY SSF51905 274 388 4.94E-68 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS19255 3c4820c391f97bbcf9781d3fe1703cd6 554 SUPERFAMILY SSF51905 16 187 4.94E-68 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS19255 3c4820c391f97bbcf9781d3fe1703cd6 554 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 166 181 2.0E-35 T 09-03-2017 RG43_RS19255 3c4820c391f97bbcf9781d3fe1703cd6 554 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 287 302 2.0E-35 T 09-03-2017 RG43_RS19255 3c4820c391f97bbcf9781d3fe1703cd6 554 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 302 318 2.0E-35 T 09-03-2017 RG43_RS19255 3c4820c391f97bbcf9781d3fe1703cd6 554 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 320 338 2.0E-35 T 09-03-2017 RG43_RS19255 3c4820c391f97bbcf9781d3fe1703cd6 554 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 338 354 2.0E-35 T 09-03-2017 RG43_RS19255 3c4820c391f97bbcf9781d3fe1703cd6 554 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 17 39 2.0E-35 T 09-03-2017 RG43_RS19255 3c4820c391f97bbcf9781d3fe1703cd6 554 Pfam PF01494 FAD binding domain 16 352 3.3E-81 T 09-03-2017 IPR002938 FAD-binding domain GO:0071949 RG43_RS19255 3c4820c391f97bbcf9781d3fe1703cd6 554 Hamap MF_01652 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase [mhpA]. 7 554 68.667 T 09-03-2017 IPR023786 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase GO:0008688|GO:0019622|GO:0055114 KEGG: 00360+1.14.13.127|KEGG: 00362+1.14.13.12|KEGG: 00627+1.14.13.12|MetaCyc: PWY-6690 RG43_RS08330 f90d60219db6a32804d897d57c9f691e 405 Gene3D G3DSA:3.40.640.10 51 279 2.3E-68 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS08330 f90d60219db6a32804d897d57c9f691e 405 SUPERFAMILY SSF53383 7 401 4.17E-94 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS08330 f90d60219db6a32804d897d57c9f691e 405 Pfam PF00155 Aminotransferase class I and II 58 387 8.6E-47 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RG43_RS08330 f90d60219db6a32804d897d57c9f691e 405 Gene3D G3DSA:3.90.1150.10 280 403 9.3E-38 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RG43_RS04490 65f268e13c2a6f528e05f7f5f9cf2214 122 Gene3D G3DSA:3.30.450.20 27 120 4.9E-60 T 09-03-2017 RG43_RS04490 65f268e13c2a6f528e05f7f5f9cf2214 122 Pfam PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A 19 117 6.7E-53 T 09-03-2017 IPR009320 YagB/YeeU/YfjZ RG43_RS04490 65f268e13c2a6f528e05f7f5f9cf2214 122 SUPERFAMILY SSF143737 8 118 2.35E-56 T 09-03-2017 RG43_RS05195 98822156c91c8e151fc394de8e11cfce 219 SUPERFAMILY SSF100950 2 146 1.86E-46 T 09-03-2017 RG43_RS05195 98822156c91c8e151fc394de8e11cfce 219 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 8.9E-59 T 09-03-2017 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 RG43_RS05195 98822156c91c8e151fc394de8e11cfce 219 Gene3D G3DSA:3.30.70.260 137 196 1.3E-30 T 09-03-2017 RG43_RS05195 98822156c91c8e151fc394de8e11cfce 219 Gene3D G3DSA:3.40.50.1360 1 136 1.7E-58 T 09-03-2017 RG43_RS05195 98822156c91c8e151fc394de8e11cfce 219 SUPERFAMILY SSF75445 127 198 2.75E-24 T 09-03-2017 RG43_RS05195 98822156c91c8e151fc394de8e11cfce 219 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 34.72 T 09-03-2017 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 RG43_RS05195 98822156c91c8e151fc394de8e11cfce 219 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 215 1.5E-72 T 09-03-2017 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 RG43_RS20835 a420bd11aa2eb89c73fa9e1d1e5a4ed7 429 PIRSF PIRSF033053 9 429 1.3E-200 T 09-03-2017 IPR017014 Fimbrial-like protein YadC RG43_RS20835 a420bd11aa2eb89c73fa9e1d1e5a4ed7 429 Gene3D G3DSA:2.60.40.1090 265 429 4.3E-26 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS20835 a420bd11aa2eb89c73fa9e1d1e5a4ed7 429 SUPERFAMILY SSF49401 281 429 1.29E-17 T 09-03-2017 IPR008966 Adhesion domain RG43_RS20835 a420bd11aa2eb89c73fa9e1d1e5a4ed7 429 Pfam PF00419 Fimbrial protein 267 428 2.5E-13 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS11230 816d72c4494e1eab3fb90b06818480ba 200 SUPERFAMILY SSF54001 9 185 9.81E-35 T 09-03-2017 RG43_RS11230 816d72c4494e1eab3fb90b06818480ba 200 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 9 184 1.1E-45 T 09-03-2017 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family RG43_RS11230 816d72c4494e1eab3fb90b06818480ba 200 Gene3D G3DSA:2.30.30.330 7 188 8.0E-46 T 09-03-2017 RG43_RS11270 d6e3783442cec3367f6157de8b1cd3f3 323 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 12 305 7.0E-110 T 09-03-2017 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 RG43_RS11270 d6e3783442cec3367f6157de8b1cd3f3 323 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 4 310 53.704 T 09-03-2017 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24 RG43_RS11270 d6e3783442cec3367f6157de8b1cd3f3 323 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 10 314 7.8E-157 T 09-03-2017 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24 RG43_RS11270 d6e3783442cec3367f6157de8b1cd3f3 323 PIRSF PIRSF026649 9 314 2.8E-105 T 09-03-2017 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 RG43_RS13065 3a3e229b9a51956bfd15416d5d0cb116 65 Pfam PF17073 Two-component-system connector protein 1 65 7.9E-48 T 09-03-2017 IPR031411 Two-component-system connector protein SafA RG43_RS08435 00926371a557641dc94145ad2fafee4b 101 Pfam PF05957 Bacterial protein of unknown function (DUF883) 9 101 1.4E-30 T 09-03-2017 IPR010279 Protein of unknown function DUF883, ElaB RG43_RS01730 1f12e0cfa636986ad717915d219fc6f2 657 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 11 97 2.1E-20 T 09-03-2017 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 RG43_RS01730 1f12e0cfa636986ad717915d219fc6f2 657 Gene3D G3DSA:3.20.20.80 149 566 5.7E-108 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RG43_RS01730 1f12e0cfa636986ad717915d219fc6f2 657 Pfam PF00128 Alpha amylase, catalytic domain 185 269 4.2E-7 T 09-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RG43_RS01730 1f12e0cfa636986ad717915d219fc6f2 657 SUPERFAMILY SSF51445 130 463 1.23E-126 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily RG43_RS01730 1f12e0cfa636986ad717915d219fc6f2 657 SUPERFAMILY SSF51445 492 564 1.23E-126 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily RG43_RS01730 1f12e0cfa636986ad717915d219fc6f2 657 Hamap MF_01248 Glycogen debranching enzyme [glgX]. 1 657 76.184 T 09-03-2017 IPR022844 Glycogen debranching enzyme, bacterial GO:0004553|GO:0005977 RG43_RS01730 1f12e0cfa636986ad717915d219fc6f2 657 SUPERFAMILY SSF81296 7 144 5.37E-47 T 09-03-2017 IPR014756 Immunoglobulin E-set RG43_RS01730 1f12e0cfa636986ad717915d219fc6f2 657 SMART SM00642 130 558 4.0E-8 T 09-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RG43_RS01730 1f12e0cfa636986ad717915d219fc6f2 657 Gene3D G3DSA:2.60.40.10 7 148 1.0E-54 T 09-03-2017 IPR013783 Immunoglobulin-like fold RG43_RS01730 1f12e0cfa636986ad717915d219fc6f2 657 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 7 629 7.2E-269 T 09-03-2017 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 RG43_RS05310 144367ea07dc08896c67c7eb2d10e016 236 Gene3D G3DSA:3.40.30.10 98 231 2.1E-53 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS05310 144367ea07dc08896c67c7eb2d10e016 236 Pfam PF13098 Thioredoxin-like domain 104 226 1.2E-29 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS05310 144367ea07dc08896c67c7eb2d10e016 236 Pfam PF10411 Disulfide bond isomerase protein N-terminus 26 75 6.5E-15 T 09-03-2017 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal RG43_RS05310 144367ea07dc08896c67c7eb2d10e016 236 SUPERFAMILY SSF52833 85 230 2.09E-44 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS05310 144367ea07dc08896c67c7eb2d10e016 236 Gene3D G3DSA:3.10.450.70 21 81 2.2E-27 T 09-03-2017 IPR009094 Disulphide bond isomerase, DsbC, N-terminal RG43_RS05310 144367ea07dc08896c67c7eb2d10e016 236 ProSitePatterns PS00194 Thioredoxin family active site. 110 128 - T 09-03-2017 IPR017937 Thioredoxin, conserved site GO:0045454 RG43_RS05310 144367ea07dc08896c67c7eb2d10e016 236 SUPERFAMILY SSF54423 22 80 1.44E-18 T 09-03-2017 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal RG43_RS02350 9d6129626f9f807a8ce60eb3fa40b527 103 Gene3D G3DSA:3.30.70.600 3 102 2.3E-42 T 09-03-2017 IPR027486 Ribosomal protein S10 domain RG43_RS02350 9d6129626f9f807a8ce60eb3fa40b527 103 SUPERFAMILY SSF54999 5 101 1.02E-35 T 09-03-2017 IPR027486 Ribosomal protein S10 domain RG43_RS02350 9d6129626f9f807a8ce60eb3fa40b527 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.898 T 09-03-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02350 9d6129626f9f807a8ce60eb3fa40b527 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.5E-17 T 09-03-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02350 9d6129626f9f807a8ce60eb3fa40b527 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.5E-17 T 09-03-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02350 9d6129626f9f807a8ce60eb3fa40b527 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.5E-17 T 09-03-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02350 9d6129626f9f807a8ce60eb3fa40b527 103 SMART SM01403 7 101 8.9E-55 T 09-03-2017 IPR027486 Ribosomal protein S10 domain RG43_RS02350 9d6129626f9f807a8ce60eb3fa40b527 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.1E-45 T 09-03-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02350 9d6129626f9f807a8ce60eb3fa40b527 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 09-03-2017 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RG43_RS02350 9d6129626f9f807a8ce60eb3fa40b527 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 1.4E-34 T 09-03-2017 IPR027486 Ribosomal protein S10 domain RG43_RS18210 f80d98116245002f2676627c8a94f714 82 Pfam PF06643 Protein of unknown function (DUF1158) 1 79 2.4E-44 T 09-03-2017 IPR010590 Protein of unknown function DUF1158 RG43_RS18210 f80d98116245002f2676627c8a94f714 82 ProDom PD027061 YBDJ MEMBRANE TRANSMEMBRANE INNER RAMA 3'REGION ECS0618 1 82 2.0E-28 T 09-03-2017 IPR010590 Protein of unknown function DUF1158 RG43_RS09585 8789b13a241256e576c249ccb509a797 159 Gene3D G3DSA:3.90.79.10 6 150 5.4E-34 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 RG43_RS09585 8789b13a241256e576c249ccb509a797 159 SUPERFAMILY SSF55811 2 152 4.47E-32 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 RG43_RS09585 8789b13a241256e576c249ccb509a797 159 Hamap MF_00941 GDP-mannose mannosyl hydrolase [gmm]. 1 159 52.609 T 09-03-2017 IPR028613 GDP-mannose mannosyl hydrolase, Enterobacteria GO:0000287|GO:0008727|GO:0030145 RG43_RS09585 8789b13a241256e576c249ccb509a797 159 Pfam PF00293 NUDIX domain 22 141 4.4E-18 T 09-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 RG43_RS09585 8789b13a241256e576c249ccb509a797 159 ProSitePatterns PS00893 Nudix box signature. 50 71 - T 09-03-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RG43_RS09585 8789b13a241256e576c249ccb509a797 159 PIRSF PIRSF037599 1 152 5.0E-73 T 09-03-2017 IPR033715 GDP-mannose mannosyl hydrolase GO:0008727 RG43_RS02950 8ae15e9195e9e36653306e096f916693 477 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 9 474 8.0E-166 T 09-03-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RG43_RS02950 8ae15e9195e9e36653306e096f916693 477 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 455 462 - T 09-03-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RG43_RS02950 8ae15e9195e9e36653306e096f916693 477 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 5 48 5.7E-16 T 09-03-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RG43_RS02950 8ae15e9195e9e36653306e096f916693 477 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 364 383 - T 09-03-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RG43_RS02950 8ae15e9195e9e36653306e096f916693 477 PRINTS PR00045 Sigma-54 factor signature 186 203 2.0E-31 T 09-03-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RG43_RS02950 8ae15e9195e9e36653306e096f916693 477 PRINTS PR00045 Sigma-54 factor signature 376 388 2.0E-31 T 09-03-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RG43_RS02950 8ae15e9195e9e36653306e096f916693 477 PRINTS PR00045 Sigma-54 factor signature 450 468 2.0E-31 T 09-03-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RG43_RS02950 8ae15e9195e9e36653306e096f916693 477 PRINTS PR00045 Sigma-54 factor signature 392 403 2.0E-31 T 09-03-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RG43_RS02950 8ae15e9195e9e36653306e096f916693 477 Pfam PF04552 Sigma-54, DNA binding domain 317 475 1.0E-70 T 09-03-2017 IPR007634 RNA polymerase sigma factor 54, DNA-binding RG43_RS02950 8ae15e9195e9e36653306e096f916693 477 Pfam PF04963 Sigma-54 factor, core binding domain 114 303 2.2E-62 T 09-03-2017 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 RG43_RS02950 8ae15e9195e9e36653306e096f916693 477 PIRSF PIRSF000774 1 477 3.3E-153 T 09-03-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RG43_RS17215 b7396d7eee76c513b83960c185c3fb3d 338 Gene3D G3DSA:3.90.25.10 180 232 8.3E-51 T 09-03-2017 RG43_RS17215 b7396d7eee76c513b83960c185c3fb3d 338 Gene3D G3DSA:3.90.25.10 264 337 8.3E-51 T 09-03-2017 RG43_RS17215 b7396d7eee76c513b83960c185c3fb3d 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 325 4.2E-66 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS17215 b7396d7eee76c513b83960c185c3fb3d 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 335 8.4E-151 T 09-03-2017 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 RG43_RS17215 b7396d7eee76c513b83960c185c3fb3d 338 Gene3D G3DSA:3.40.50.720 1 179 2.7E-54 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS17215 b7396d7eee76c513b83960c185c3fb3d 338 SUPERFAMILY SSF51735 1 336 8.17E-102 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS13075 650eb26eba30745f3382fc93df9b423f 560 Gene3D G3DSA:3.40.720.10 56 422 7.5E-97 T 09-03-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RG43_RS13075 650eb26eba30745f3382fc93df9b423f 560 Pfam PF00884 Sulfatase 58 408 1.6E-101 T 09-03-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RG43_RS13075 650eb26eba30745f3382fc93df9b423f 560 ProSitePatterns PS00523 Sulfatases signature 1. 130 142 - T 09-03-2017 IPR024607 Sulfatase, conserved site RG43_RS13075 650eb26eba30745f3382fc93df9b423f 560 ProSitePatterns PS00149 Sulfatases signature 2. 175 185 - T 09-03-2017 IPR024607 Sulfatase, conserved site RG43_RS13075 650eb26eba30745f3382fc93df9b423f 560 Gene3D G3DSA:3.30.1120.10 423 533 1.7E-6 T 09-03-2017 RG43_RS13075 650eb26eba30745f3382fc93df9b423f 560 SUPERFAMILY SSF53649 481 536 1.74E-98 T 09-03-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RG43_RS13075 650eb26eba30745f3382fc93df9b423f 560 SUPERFAMILY SSF53649 57 82 1.74E-98 T 09-03-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RG43_RS13075 650eb26eba30745f3382fc93df9b423f 560 SUPERFAMILY SSF53649 109 445 1.74E-98 T 09-03-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RG43_RS23095 6427e19f36e674e964025407814a2b18 281 Pfam PF06007 Phosphonate metabolism protein PhnJ 6 277 6.1E-149 T 09-03-2017 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399 RG43_RS23095 6427e19f36e674e964025407814a2b18 281 PIRSF PIRSF011468 1 281 9.1E-170 T 09-03-2017 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399 RG43_RS24500 9f1aea5bd3b74bf0a7921aea16a8522d 419 Gene3D G3DSA:3.20.20.150 2 418 8.4E-229 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain RG43_RS24500 9f1aea5bd3b74bf0a7921aea16a8522d 419 SUPERFAMILY SSF51658 4 418 4.97E-83 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain RG43_RS24500 9f1aea5bd3b74bf0a7921aea16a8522d 419 TIGRFAM TIGR01748 rhaA: L-rhamnose isomerase 5 418 7.9E-250 T 09-03-2017 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 RG43_RS24500 9f1aea5bd3b74bf0a7921aea16a8522d 419 Pfam PF06134 L-rhamnose isomerase (RhaA) 3 418 1.0E-238 T 09-03-2017 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 RG43_RS24500 9f1aea5bd3b74bf0a7921aea16a8522d 419 ProDom PD042532 ISOMERASE L-RHAMNOSE METAL-BINDING METABOLISM RHAMNOSE MANGANESE ENZYME KINASE 3D-STRUCTURE RHAA/RHAB 9 418 0.0 T 09-03-2017 RG43_RS24500 9f1aea5bd3b74bf0a7921aea16a8522d 419 Hamap MF_00541 L-rhamnose isomerase [rhaA]. 1 419 279.186 T 09-03-2017 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 RG43_RS22405 4d355a65e14d82167c844beacfde0996 126 SUPERFAMILY SSF46785 13 118 1.93E-32 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS22405 4d355a65e14d82167c844beacfde0996 126 Pfam PF01638 HxlR-like helix-turn-helix 29 115 5.6E-32 T 09-03-2017 IPR002577 Helix-turn-helix, HxlR type RG43_RS22405 4d355a65e14d82167c844beacfde0996 126 Gene3D G3DSA:1.10.10.10 3 123 3.2E-45 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS12895 9bd0d84c6db8020541e15fa836d2f3e7 462 Gene3D G3DSA:3.40.309.10 248 432 4.1E-63 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RG43_RS12895 9bd0d84c6db8020541e15fa836d2f3e7 462 Pfam PF00171 Aldehyde dehydrogenase family 10 457 2.5E-140 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RG43_RS12895 9bd0d84c6db8020541e15fa836d2f3e7 462 SUPERFAMILY SSF53720 9 460 1.22E-142 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RG43_RS12895 9bd0d84c6db8020541e15fa836d2f3e7 462 Gene3D G3DSA:3.40.605.10 11 247 5.9E-72 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RG43_RS12895 9bd0d84c6db8020541e15fa836d2f3e7 462 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 261 272 - T 09-03-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RG43_RS16340 81aec0e77715f9ceec1214693220e28a 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 51 72 5.0E-76 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 RG43_RS16340 81aec0e77715f9ceec1214693220e28a 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 127 143 5.0E-76 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 RG43_RS16340 81aec0e77715f9ceec1214693220e28a 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 78 92 5.0E-76 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 RG43_RS16340 81aec0e77715f9ceec1214693220e28a 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 269 288 5.0E-76 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 RG43_RS16340 81aec0e77715f9ceec1214693220e28a 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 158 172 5.0E-76 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 RG43_RS16340 81aec0e77715f9ceec1214693220e28a 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 181 200 5.0E-76 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 RG43_RS16340 81aec0e77715f9ceec1214693220e28a 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 314 340 5.0E-76 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 RG43_RS16340 81aec0e77715f9ceec1214693220e28a 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 219 238 5.0E-76 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 RG43_RS16340 81aec0e77715f9ceec1214693220e28a 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 35 51 5.0E-76 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 RG43_RS16340 81aec0e77715f9ceec1214693220e28a 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 94 107 5.0E-76 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 RG43_RS16340 81aec0e77715f9ceec1214693220e28a 370 Pfam PF13416 Bacterial extracellular solute-binding protein 46 335 2.6E-35 T 09-03-2017 RG43_RS16340 81aec0e77715f9ceec1214693220e28a 370 PIRSF PIRSF019574 1 370 5.7E-144 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 RG43_RS16340 81aec0e77715f9ceec1214693220e28a 370 Gene3D G3DSA:3.40.190.10 27 150 5.2E-12 T 09-03-2017 RG43_RS16340 81aec0e77715f9ceec1214693220e28a 370 Gene3D G3DSA:3.40.190.10 151 319 5.8E-76 T 09-03-2017 RG43_RS16340 81aec0e77715f9ceec1214693220e28a 370 SUPERFAMILY SSF53850 29 369 2.36E-105 T 09-03-2017 RG43_RS21775 66319064d61836b210e41c9ee90775ca 241 SUPERFAMILY SSF46894 145 209 4.08E-12 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RG43_RS21775 66319064d61836b210e41c9ee90775ca 241 Gene3D G3DSA:1.10.10.10 137 209 1.6E-11 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS21775 66319064d61836b210e41c9ee90775ca 241 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 207 9.3E-10 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS21775 66319064d61836b210e41c9ee90775ca 241 SMART SM00421 151 208 3.9E-11 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RG43_RS19500 405e23be29fb1987bc49d4478f52b137 763 SMART SM00869 501 752 1.3E-45 T 09-03-2017 IPR005546 Autotransporter beta-domain RG43_RS19500 405e23be29fb1987bc49d4478f52b137 763 SUPERFAMILY SSF51126 52 456 6.28E-17 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor RG43_RS19500 405e23be29fb1987bc49d4478f52b137 763 Gene3D G3DSA:2.40.128.130 468 763 2.6E-71 T 09-03-2017 IPR005546 Autotransporter beta-domain RG43_RS19500 405e23be29fb1987bc49d4478f52b137 763 Pfam PF03797 Autotransporter beta-domain 499 747 2.9E-46 T 09-03-2017 IPR005546 Autotransporter beta-domain RG43_RS19500 405e23be29fb1987bc49d4478f52b137 763 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 364 763 2.1E-69 T 09-03-2017 IPR006315 Outer membrane autotransporter barrel GO:0019867 RG43_RS19500 405e23be29fb1987bc49d4478f52b137 763 Gene3D G3DSA:2.160.20.20 30 455 2.3E-15 T 09-03-2017 IPR012332 P22 tailspike C-terminal domain-like RG43_RS19500 405e23be29fb1987bc49d4478f52b137 763 SUPERFAMILY SSF103515 471 763 1.7E-52 T 09-03-2017 IPR005546 Autotransporter beta-domain RG43_RS19500 405e23be29fb1987bc49d4478f52b137 763 PRINTS PR01484 Pertactin virulence factor family signature 634 651 8.2E-10 T 09-03-2017 IPR003991 Pertactin virulence factor family GO:0007155 RG43_RS19500 405e23be29fb1987bc49d4478f52b137 763 PRINTS PR01484 Pertactin virulence factor family signature 743 763 8.2E-10 T 09-03-2017 IPR003991 Pertactin virulence factor family GO:0007155 RG43_RS19500 405e23be29fb1987bc49d4478f52b137 763 PRINTS PR01484 Pertactin virulence factor family signature 501 521 8.2E-10 T 09-03-2017 IPR003991 Pertactin virulence factor family GO:0007155 RG43_RS19500 405e23be29fb1987bc49d4478f52b137 763 PRINTS PR01484 Pertactin virulence factor family signature 680 701 8.2E-10 T 09-03-2017 IPR003991 Pertactin virulence factor family GO:0007155 RG43_RS19500 405e23be29fb1987bc49d4478f52b137 763 PRINTS PR01484 Pertactin virulence factor family signature 718 743 8.2E-10 T 09-03-2017 IPR003991 Pertactin virulence factor family GO:0007155 RG43_RS19500 405e23be29fb1987bc49d4478f52b137 763 PRINTS PR01484 Pertactin virulence factor family signature 542 566 8.2E-10 T 09-03-2017 IPR003991 Pertactin virulence factor family GO:0007155 RG43_RS04840 0a5ecbb65541473f7db335ff17e054f1 336 ProDom PD484789 PAPG ADHESION ADHESIN FIMBRIAL PRECURSOR SIGNAL FIMBRIA PAPGII PRSG CELL 217 333 1.0E-63 T 09-03-2017 IPR005309 PapG, chaperone-binding RG43_RS04840 0a5ecbb65541473f7db335ff17e054f1 336 Gene3D G3DSA:2.60.40.1370 21 216 2.3E-103 T 09-03-2017 IPR005310 PapG, carbohydrate-binding GO:0007155|GO:0030246 RG43_RS04840 0a5ecbb65541473f7db335ff17e054f1 336 SUPERFAMILY SSF49401 21 216 3.23E-94 T 09-03-2017 IPR008966 Adhesion domain RG43_RS04840 0a5ecbb65541473f7db335ff17e054f1 336 Pfam PF03627 PapG carbohydrate binding domain 1 226 2.1E-112 T 09-03-2017 IPR005310 PapG, carbohydrate-binding GO:0007155|GO:0030246 RG43_RS04840 0a5ecbb65541473f7db335ff17e054f1 336 Pfam PF03628 PapG chaperone-binding domain 228 336 3.2E-56 T 09-03-2017 IPR005309 PapG, chaperone-binding RG43_RS11305 b314da7703a0f4533abc0e706147208f 213 Pfam PF01081 KDPG and KHG aldolase 9 203 2.0E-94 T 09-03-2017 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 RG43_RS11305 b314da7703a0f4533abc0e706147208f 213 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 9 209 3.0E-87 T 09-03-2017 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 RG43_RS11305 b314da7703a0f4533abc0e706147208f 213 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 128 141 - T 09-03-2017 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 RG43_RS11305 b314da7703a0f4533abc0e706147208f 213 SUPERFAMILY SSF51569 3 209 5.49E-69 T 09-03-2017 RG43_RS11305 b314da7703a0f4533abc0e706147208f 213 Gene3D G3DSA:3.20.20.70 2 210 2.9E-78 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS11305 b314da7703a0f4533abc0e706147208f 213 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 40 49 - T 09-03-2017 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 RG43_RS04015 ef0dad65ad91b11ac442e559dda68e16 193 SUPERFAMILY SSF53474 3 188 2.66E-21 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS04015 ef0dad65ad91b11ac442e559dda68e16 193 Gene3D G3DSA:3.40.50.1820 3 185 2.0E-16 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS04015 ef0dad65ad91b11ac442e559dda68e16 193 Pfam PF05728 Uncharacterised protein family (UPF0227) 4 188 1.9E-74 T 09-03-2017 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA RG43_RS26390 ef0dad65ad91b11ac442e559dda68e16 193 SUPERFAMILY SSF53474 3 188 2.66E-21 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS26390 ef0dad65ad91b11ac442e559dda68e16 193 Gene3D G3DSA:3.40.50.1820 3 185 2.0E-16 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS26390 ef0dad65ad91b11ac442e559dda68e16 193 Pfam PF05728 Uncharacterised protein family (UPF0227) 4 188 1.9E-74 T 09-03-2017 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA RG43_RS10175 79e558d6c4a8790bddf3719a7d86a5ea 366 PIRSF PIRSF017494 4 363 3.0E-153 T 09-03-2017 IPR010091 Thiazolinyl imide reductase RG43_RS10175 79e558d6c4a8790bddf3719a7d86a5ea 366 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 10 126 4.0E-24 T 09-03-2017 IPR000683 Oxidoreductase, N-terminal GO:0016491 RG43_RS10175 79e558d6c4a8790bddf3719a7d86a5ea 366 TIGRFAM TIGR01761 thiaz-red: thiazolinyl imide reductase 6 348 3.6E-161 T 09-03-2017 IPR010091 Thiazolinyl imide reductase RG43_RS10175 79e558d6c4a8790bddf3719a7d86a5ea 366 SUPERFAMILY SSF51735 8 140 5.1E-14 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS10175 79e558d6c4a8790bddf3719a7d86a5ea 366 Gene3D G3DSA:3.40.50.720 4 139 5.0E-10 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS17900 9619fb5669adb8b1a2ab49236511e1c7 633 Gene3D G3DSA:3.40.710.10 253 612 4.5E-99 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like RG43_RS17900 9619fb5669adb8b1a2ab49236511e1c7 633 Pfam PF03717 Penicillin-binding Protein dimerisation domain 64 239 6.6E-46 T 09-03-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 RG43_RS17900 9619fb5669adb8b1a2ab49236511e1c7 633 SUPERFAMILY SSF56519 56 253 1.31E-53 T 09-03-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 RG43_RS17900 9619fb5669adb8b1a2ab49236511e1c7 633 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 19 612 6.8E-240 T 09-03-2017 IPR017790 Penicillin-binding protein 2 GO:0016020 RG43_RS17900 9619fb5669adb8b1a2ab49236511e1c7 633 Gene3D G3DSA:3.90.1310.10 130 252 5.9E-41 T 09-03-2017 RG43_RS17900 9619fb5669adb8b1a2ab49236511e1c7 633 SUPERFAMILY SSF56601 254 611 2.47E-91 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like RG43_RS17900 9619fb5669adb8b1a2ab49236511e1c7 633 Pfam PF00905 Penicillin binding protein transpeptidase domain 272 609 9.7E-86 T 09-03-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RG43_RS13130 07e6492c255a0b650400bb99932324d2 143 Gene3D G3DSA:3.30.300.20 3 141 3.0E-54 T 09-03-2017 IPR015946 K homology domain-like, alpha/beta RG43_RS13130 07e6492c255a0b650400bb99932324d2 143 Pfam PF02566 OsmC-like protein 43 138 4.9E-19 T 09-03-2017 IPR003718 OsmC/Ohr family RG43_RS13130 07e6492c255a0b650400bb99932324d2 143 TIGRFAM TIGR03562 osmo_induc_OsmC: peroxiredoxin, OsmC subfamily 5 138 2.2E-61 T 09-03-2017 IPR019904 Peroxiredoxin OsmC GO:0004601|GO:0006979 KEGG: 00480+1.11.1.15 RG43_RS13130 07e6492c255a0b650400bb99932324d2 143 SUPERFAMILY SSF82784 1 141 9.29E-42 T 09-03-2017 IPR003718 OsmC/Ohr family RG43_RS13085 92d1c0700f76d9e2a930a8e96dbb28ad 561 Pfam PF06472 ABC transporter transmembrane region 2 15 301 4.9E-48 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RG43_RS13085 92d1c0700f76d9e2a930a8e96dbb28ad 561 SUPERFAMILY SSF90123 30 345 4.71E-21 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RG43_RS13085 92d1c0700f76d9e2a930a8e96dbb28ad 561 Gene3D G3DSA:1.20.1560.10 32 350 1.6E-11 T 09-03-2017 RG43_RS13085 92d1c0700f76d9e2a930a8e96dbb28ad 561 Pfam PF00005 ABC transporter 383 515 1.2E-18 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS13085 92d1c0700f76d9e2a930a8e96dbb28ad 561 SUPERFAMILY SSF52540 360 557 9.19E-34 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS13085 92d1c0700f76d9e2a930a8e96dbb28ad 561 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS13085 92d1c0700f76d9e2a930a8e96dbb28ad 561 Gene3D G3DSA:3.40.50.300 368 557 1.1E-33 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS22140 47258fb0286d2901ecc45043fe4cf250 500 Gene3D G3DSA:3.40.50.300 16 108 5.6E-63 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS22140 47258fb0286d2901ecc45043fe4cf250 500 Gene3D G3DSA:3.40.50.300 204 380 5.6E-63 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS22140 47258fb0286d2901ecc45043fe4cf250 500 SUPERFAMILY SSF52540 13 369 8.81E-55 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS22140 47258fb0286d2901ecc45043fe4cf250 500 Pfam PF05872 Bacterial protein of unknown function (DUF853) 5 500 9.0E-251 T 09-03-2017 IPR033186 Helicase HerA-like C-terminal RG43_RS08180 d1eabbf04fdbf7b2a7838df64344bd29 337 PIRSF PIRSF000148 4 337 3.3E-101 T 09-03-2017 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 RG43_RS08180 d1eabbf04fdbf7b2a7838df64344bd29 337 Gene3D G3DSA:3.40.50.720 1 144 3.5E-49 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS08180 d1eabbf04fdbf7b2a7838df64344bd29 337 SUPERFAMILY SSF51735 5 157 5.4E-43 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS08180 d1eabbf04fdbf7b2a7838df64344bd29 337 SUPERFAMILY SSF55347 132 319 2.74E-51 T 09-03-2017 RG43_RS08180 d1eabbf04fdbf7b2a7838df64344bd29 337 Gene3D G3DSA:3.30.360.10 145 314 5.6E-52 T 09-03-2017 RG43_RS08180 d1eabbf04fdbf7b2a7838df64344bd29 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 117 1.0E-25 T 09-03-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RG43_RS08180 d1eabbf04fdbf7b2a7838df64344bd29 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 317 3.8E-42 T 09-03-2017 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 RG43_RS08180 d1eabbf04fdbf7b2a7838df64344bd29 337 SMART SM00859 6 121 4.4E-32 T 09-03-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RG43_RS13180 68679df3fd1cae33b0ab4da2d06b69c9 217 Gene3D G3DSA:1.20.950.20 1 215 1.9E-75 T 09-03-2017 RG43_RS13180 68679df3fd1cae33b0ab4da2d06b69c9 217 Pfam PF01292 Prokaryotic cytochrome b561 13 186 2.4E-18 T 09-03-2017 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 RG43_RS13180 68679df3fd1cae33b0ab4da2d06b69c9 217 SUPERFAMILY SSF81342 3 212 2.82E-54 T 09-03-2017 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 RG43_RS13180 68679df3fd1cae33b0ab4da2d06b69c9 217 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 7 206 5.1E-69 T 09-03-2017 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 RG43_RS06835 8558663f9e2beb6bb3074c54d3e213ba 444 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 09-03-2017 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site RG43_RS06835 8558663f9e2beb6bb3074c54d3e213ba 444 SUPERFAMILY SSF52540 76 358 1.14E-67 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS06835 8558663f9e2beb6bb3074c54d3e213ba 444 Pfam PF00271 Helicase conserved C-terminal domain 236 343 3.0E-28 T 09-03-2017 IPR001650 Helicase, C-terminal RG43_RS06835 8558663f9e2beb6bb3074c54d3e213ba 444 Pfam PF00270 DEAD/DEAH box helicase 28 197 6.7E-47 T 09-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RG43_RS06835 8558663f9e2beb6bb3074c54d3e213ba 444 Gene3D G3DSA:3.40.50.300 3 214 2.0E-75 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS06835 8558663f9e2beb6bb3074c54d3e213ba 444 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 4 428 50.549 T 09-03-2017 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 RG43_RS06835 8558663f9e2beb6bb3074c54d3e213ba 444 SMART SM00490 262 343 7.5E-31 T 09-03-2017 IPR001650 Helicase, C-terminal RG43_RS06835 8558663f9e2beb6bb3074c54d3e213ba 444 Gene3D G3DSA:3.40.50.300 215 374 1.7E-49 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS06835 8558663f9e2beb6bb3074c54d3e213ba 444 SMART SM00487 23 223 6.8E-60 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain RG43_RS07430 5353a3e9c7a2624c3d69c8ba4d976dc0 659 Gene3D G3DSA:3.30.70.20 5 176 7.7E-25 T 09-03-2017 RG43_RS07430 5353a3e9c7a2624c3d69c8ba4d976dc0 659 SUPERFAMILY SSF54862 196 293 2.18E-43 T 09-03-2017 RG43_RS07430 5353a3e9c7a2624c3d69c8ba4d976dc0 659 SUPERFAMILY SSF54862 1 161 2.18E-43 T 09-03-2017 RG43_RS07430 5353a3e9c7a2624c3d69c8ba4d976dc0 659 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 187 653 8.5E-266 T 09-03-2017 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 RG43_RS07430 5353a3e9c7a2624c3d69c8ba4d976dc0 659 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 328 640 2.0E-24 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS07430 5353a3e9c7a2624c3d69c8ba4d976dc0 659 SUPERFAMILY SSF51971 327 582 2.65E-69 T 09-03-2017 RG43_RS07430 5353a3e9c7a2624c3d69c8ba4d976dc0 659 Gene3D G3DSA:1.10.1060.10 185 330 9.4E-45 T 09-03-2017 RG43_RS07430 5353a3e9c7a2624c3d69c8ba4d976dc0 659 Gene3D G3DSA:3.40.50.720 331 572 1.2E-60 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS07430 5353a3e9c7a2624c3d69c8ba4d976dc0 659 Pfam PF13247 4Fe-4S dicluster domain 55 144 3.2E-9 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS07430 5353a3e9c7a2624c3d69c8ba4d976dc0 659 PRINTS PR00419 Adrenodoxin reductase family signature 352 365 1.5E-38 T 09-03-2017 RG43_RS07430 5353a3e9c7a2624c3d69c8ba4d976dc0 659 PRINTS PR00419 Adrenodoxin reductase family signature 471 485 1.5E-38 T 09-03-2017 RG43_RS07430 5353a3e9c7a2624c3d69c8ba4d976dc0 659 PRINTS PR00419 Adrenodoxin reductase family signature 505 518 1.5E-38 T 09-03-2017 RG43_RS07430 5353a3e9c7a2624c3d69c8ba4d976dc0 659 PRINTS PR00419 Adrenodoxin reductase family signature 394 404 1.5E-38 T 09-03-2017 RG43_RS07430 5353a3e9c7a2624c3d69c8ba4d976dc0 659 PRINTS PR00419 Adrenodoxin reductase family signature 329 351 1.5E-38 T 09-03-2017 RG43_RS07430 5353a3e9c7a2624c3d69c8ba4d976dc0 659 Gene3D G3DSA:3.40.50.720 573 649 1.8E-10 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS07430 5353a3e9c7a2624c3d69c8ba4d976dc0 659 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 205 315 4.3E-37 T 09-03-2017 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 RG43_RS07430 5353a3e9c7a2624c3d69c8ba4d976dc0 659 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 87 98 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS16090 e3df422ab6879a8f35675aa92ed46de7 476 Pfam PF13520 Amino acid permease 12 450 2.1E-29 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RG43_RS16090 e3df422ab6879a8f35675aa92ed46de7 476 PIRSF PIRSF006060 1 474 1.1E-50 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RG43_RS11410 cf445f56a90bf38f13ef3fa2222b8961 218 Pfam PF00149 Calcineurin-like phosphoesterase 18 163 7.9E-12 T 09-03-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RG43_RS11410 cf445f56a90bf38f13ef3fa2222b8961 218 Gene3D G3DSA:3.60.21.10 9 218 6.4E-45 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like RG43_RS11410 cf445f56a90bf38f13ef3fa2222b8961 218 SUPERFAMILY SSF56300 17 217 7.6E-43 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like RG43_RS11410 cf445f56a90bf38f13ef3fa2222b8961 218 ProSitePatterns PS00125 Serine/threonine specific protein phosphatases signature. 76 81 - T 09-03-2017 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04660+3.1.3.16 RG43_RS23100 694c92436743e6ea826dcaa513f049ca 252 SMART SM00382 30 223 7.5E-15 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS23100 694c92436743e6ea826dcaa513f049ca 252 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS23100 694c92436743e6ea826dcaa513f049ca 252 Gene3D G3DSA:3.40.50.300 4 247 1.5E-65 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS23100 694c92436743e6ea826dcaa513f049ca 252 SUPERFAMILY SSF52540 3 248 6.18E-62 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS23100 694c92436743e6ea826dcaa513f049ca 252 Pfam PF00005 ABC transporter 22 173 2.5E-32 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS23100 694c92436743e6ea826dcaa513f049ca 252 TIGRFAM TIGR02323 CP_lyasePhnK: phosphonate C-P lyase system protein PhnK 3 250 5.4E-124 T 09-03-2017 IPR012700 Phosphonate C-P lyase system, PhnK RG43_RS23100 694c92436743e6ea826dcaa513f049ca 252 PIRSF PIRSF037116 1 252 4.6E-141 T 09-03-2017 IPR012700 Phosphonate C-P lyase system, PhnK RG43_RS06150 0d66cac3dc03aaed13413a770d77a7f2 135 Gene3D G3DSA:1.10.10.10 2 133 4.1E-32 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS06150 0d66cac3dc03aaed13413a770d77a7f2 135 Pfam PF01047 MarR family 29 85 9.7E-12 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RG43_RS06150 0d66cac3dc03aaed13413a770d77a7f2 135 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 78 1.9E-10 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RG43_RS06150 0d66cac3dc03aaed13413a770d77a7f2 135 PRINTS PR00598 Bacterial regulatory protein MarR family signature 112 132 1.9E-10 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RG43_RS06150 0d66cac3dc03aaed13413a770d77a7f2 135 PRINTS PR00598 Bacterial regulatory protein MarR family signature 82 98 1.9E-10 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RG43_RS06150 0d66cac3dc03aaed13413a770d77a7f2 135 SUPERFAMILY SSF46785 3 134 1.89E-29 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS06150 0d66cac3dc03aaed13413a770d77a7f2 135 SMART SM00347 24 122 1.0E-17 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RG43_RS06150 0d66cac3dc03aaed13413a770d77a7f2 135 ProSitePatterns PS01117 MarR-type HTH domain signature. 61 95 - T 09-03-2017 IPR023187 Transcriptional regulator MarR-type, conserved site RG43_RS20605 c8bf2234caa71a5e1101193ea1efb001 341 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 22 88 8.3E-22 T 09-03-2017 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 RG43_RS20605 c8bf2234caa71a5e1101193ea1efb001 341 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 110 144 3.3E-10 T 09-03-2017 IPR001451 Hexapeptide repeat RG43_RS20605 c8bf2234caa71a5e1101193ea1efb001 341 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 179 4.4E-7 T 09-03-2017 IPR001451 Hexapeptide repeat RG43_RS20605 c8bf2234caa71a5e1101193ea1efb001 341 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 222 255 3.5E-7 T 09-03-2017 IPR001451 Hexapeptide repeat RG43_RS20605 c8bf2234caa71a5e1101193ea1efb001 341 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 100 128 - T 09-03-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 RG43_RS20605 c8bf2234caa71a5e1101193ea1efb001 341 SUPERFAMILY SSF51161 32 316 9.29E-87 T 09-03-2017 IPR011004 Trimeric LpxA-like RG43_RS20605 c8bf2234caa71a5e1101193ea1efb001 341 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 106 134 - T 09-03-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 RG43_RS20605 c8bf2234caa71a5e1101193ea1efb001 341 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 9 326 35.857 T 09-03-2017 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 RG43_RS20605 c8bf2234caa71a5e1101193ea1efb001 341 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 1.2E-131 T 09-03-2017 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 RG43_RS20605 c8bf2234caa71a5e1101193ea1efb001 341 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 259 285 0.22 T 09-03-2017 IPR001451 Hexapeptide repeat RG43_RS20605 c8bf2234caa71a5e1101193ea1efb001 341 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 225 253 - T 09-03-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 RG43_RS20605 c8bf2234caa71a5e1101193ea1efb001 341 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 130 158 - T 09-03-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 RG43_RS20605 c8bf2234caa71a5e1101193ea1efb001 341 Gene3D G3DSA:2.160.10.10 99 140 5.9E-12 T 09-03-2017 RG43_RS20605 c8bf2234caa71a5e1101193ea1efb001 341 Gene3D G3DSA:2.160.10.10 141 309 7.4E-42 T 09-03-2017 RG43_RS24180 8555f841648d7c122ec29f0a4cafc26c 251 SUPERFAMILY SSF54197 31 249 3.23E-91 T 09-03-2017 IPR011146 HIT-like domain GO:0003824 RG43_RS24180 8555f841648d7c122ec29f0a4cafc26c 251 Gene3D G3DSA:3.30.428.30 26 251 2.2E-108 T 09-03-2017 RG43_RS24180 8555f841648d7c122ec29f0a4cafc26c 251 PIRSF PIRSF001273 1 251 1.2E-112 T 09-03-2017 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 RG43_RS24180 8555f841648d7c122ec29f0a4cafc26c 251 TIGRFAM TIGR00672 cdh: CDP-diacylglycerol diphosphatase 1 251 1.1E-163 T 09-03-2017 IPR015993 CDP-diacylglycerol pyrophosphatase, proteobacterial GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 RG43_RS24180 8555f841648d7c122ec29f0a4cafc26c 251 Pfam PF02611 CDP-diacylglycerol pyrophosphatase 31 249 1.5E-92 T 09-03-2017 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 RG43_RS24180 8555f841648d7c122ec29f0a4cafc26c 251 Hamap MF_00319 CDP-diacylglycerol pyrophosphatase [cdh]. 1 251 58.338 T 09-03-2017 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 RG43_RS26190 75f1ddc04ebf9d5bc247ed264936c742 168 Gene3D G3DSA:3.40.470.10 2 163 8.4E-59 T 09-03-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 RG43_RS26190 75f1ddc04ebf9d5bc247ed264936c742 168 Hamap MF_01956 G/U mismatch-specific DNA glycosylase [mug]. 1 168 51.132 T 09-03-2017 IPR023502 G/U mismatch-specific DNA glycosylase, bacterial GO:0006281|GO:0019104 RG43_RS26190 75f1ddc04ebf9d5bc247ed264936c742 168 SUPERFAMILY SSF52141 2 163 8.5E-48 T 09-03-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 RG43_RS26190 75f1ddc04ebf9d5bc247ed264936c742 168 Pfam PF03167 Uracil DNA glycosylase superfamily 6 159 1.5E-24 T 09-03-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 RG43_RS03815 75f1ddc04ebf9d5bc247ed264936c742 168 Gene3D G3DSA:3.40.470.10 2 163 8.4E-59 T 09-03-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 RG43_RS03815 75f1ddc04ebf9d5bc247ed264936c742 168 Hamap MF_01956 G/U mismatch-specific DNA glycosylase [mug]. 1 168 51.132 T 09-03-2017 IPR023502 G/U mismatch-specific DNA glycosylase, bacterial GO:0006281|GO:0019104 RG43_RS03815 75f1ddc04ebf9d5bc247ed264936c742 168 SUPERFAMILY SSF52141 2 163 8.5E-48 T 09-03-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 RG43_RS03815 75f1ddc04ebf9d5bc247ed264936c742 168 Pfam PF03167 Uracil DNA glycosylase superfamily 6 159 1.5E-24 T 09-03-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 RG43_RS21290 fbfa09c824c008c26091ecd9567c2302 329 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 6 324 8.0E-132 T 09-03-2017 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 RG43_RS21290 fbfa09c824c008c26091ecd9567c2302 329 Gene3D G3DSA:3.40.718.10 3 327 1.6E-139 T 09-03-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 RG43_RS21290 fbfa09c824c008c26091ecd9567c2302 329 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 34 321 3.5E-110 T 09-03-2017 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 RG43_RS21290 fbfa09c824c008c26091ecd9567c2302 329 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 3 325 36.652 T 09-03-2017 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 RG43_RS21290 fbfa09c824c008c26091ecd9567c2302 329 SUPERFAMILY SSF53659 5 327 8.96E-118 T 09-03-2017 RG43_RS21115 a7130ae9c63a8db010032be1082cb87a 495 Gene3D G3DSA:3.90.190.20 343 484 2.3E-59 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 RG43_RS21115 a7130ae9c63a8db010032be1082cb87a 495 SUPERFAMILY SSF53623 105 338 7.85E-80 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RG43_RS21115 a7130ae9c63a8db010032be1082cb87a 495 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 22 491 1.2E-165 T 09-03-2017 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 RG43_RS21115 a7130ae9c63a8db010032be1082cb87a 495 SUPERFAMILY SSF53244 339 491 7.78E-52 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 RG43_RS21115 a7130ae9c63a8db010032be1082cb87a 495 SUPERFAMILY SSF63418 5 103 1.7E-22 T 09-03-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 RG43_RS21115 a7130ae9c63a8db010032be1082cb87a 495 Pfam PF02875 Mur ligase family, glutamate ligase domain 339 425 1.5E-25 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 RG43_RS21115 a7130ae9c63a8db010032be1082cb87a 495 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 4 491 35.031 T 09-03-2017 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 RG43_RS21115 a7130ae9c63a8db010032be1082cb87a 495 Gene3D G3DSA:3.40.1390.10 4 103 9.1E-34 T 09-03-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 RG43_RS21115 a7130ae9c63a8db010032be1082cb87a 495 Pfam PF08245 Mur ligase middle domain 114 318 8.4E-52 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RG43_RS21115 a7130ae9c63a8db010032be1082cb87a 495 Gene3D G3DSA:3.40.1190.10 105 342 8.0E-83 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RG43_RS21115 a7130ae9c63a8db010032be1082cb87a 495 Pfam PF01225 Mur ligase family, catalytic domain 25 102 7.1E-12 T 09-03-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 RG43_RS02460 1d39cb39316a9c2998ec292730c96ef2 38 Pfam PF00444 Ribosomal protein L36 1 38 2.2E-20 T 09-03-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS02460 1d39cb39316a9c2998ec292730c96ef2 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 5.9E-22 T 09-03-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS02460 1d39cb39316a9c2998ec292730c96ef2 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 17.829 T 09-03-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS02460 1d39cb39316a9c2998ec292730c96ef2 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 38 3.0E-10 T 09-03-2017 RG43_RS02460 1d39cb39316a9c2998ec292730c96ef2 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 09-03-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS02460 1d39cb39316a9c2998ec292730c96ef2 38 SUPERFAMILY SSF57840 1 38 5.89E-17 T 09-03-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS05095 eeae9efaea5679dcbc60e2cdcba2547b 425 Gene3D G3DSA:3.40.50.720 181 314 1.1E-21 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS05095 eeae9efaea5679dcbc60e2cdcba2547b 425 Pfam PF00107 Zinc-binding dehydrogenase 186 329 1.6E-18 T 09-03-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RG43_RS05095 eeae9efaea5679dcbc60e2cdcba2547b 425 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 97 5.2E-7 T 09-03-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RG43_RS05095 eeae9efaea5679dcbc60e2cdcba2547b 425 Gene3D G3DSA:3.90.180.10 4 180 1.7E-16 T 09-03-2017 IPR011032 GroES-like RG43_RS05095 eeae9efaea5679dcbc60e2cdcba2547b 425 SUPERFAMILY SSF51735 157 336 2.18E-19 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS05095 eeae9efaea5679dcbc60e2cdcba2547b 425 SUPERFAMILY SSF50129 3 188 9.28E-25 T 09-03-2017 IPR011032 GroES-like RG43_RS16660 92a1aebd6b0064ea50ce80a6a058e1b3 101 SUPERFAMILY SSF143990 35 100 2.35E-23 T 09-03-2017 RG43_RS16660 92a1aebd6b0064ea50ce80a6a058e1b3 101 Pfam PF08719 Domain of unknown function (DUF1768) 34 97 1.3E-16 T 09-03-2017 IPR012816 NADAR RG43_RS08780 c95f7b78e5854b47d0cb5f976dd6c7bf 205 SUPERFAMILY SSF52540 2 187 1.54E-43 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS08780 c95f7b78e5854b47d0cb5f976dd6c7bf 205 Pfam PF00005 ABC transporter 19 154 4.7E-32 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS08780 c95f7b78e5854b47d0cb5f976dd6c7bf 205 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 198 2.4E-86 T 09-03-2017 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 RG43_RS08780 c95f7b78e5854b47d0cb5f976dd6c7bf 205 Gene3D G3DSA:3.40.50.300 2 189 1.7E-43 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS08780 c95f7b78e5854b47d0cb5f976dd6c7bf 205 SMART SM00382 26 204 2.5E-6 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS08780 c95f7b78e5854b47d0cb5f976dd6c7bf 205 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS22590 4cdb6109af64240f86d9c9c6583d927d 387 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 14 385 5.6E-151 T 09-03-2017 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain RG43_RS22590 4cdb6109af64240f86d9c9c6583d927d 387 SUPERFAMILY SSF56059 1 169 2.86E-84 T 09-03-2017 RG43_RS22590 4cdb6109af64240f86d9c9c6583d927d 387 SUPERFAMILY SSF56059 264 384 2.86E-84 T 09-03-2017 RG43_RS22590 4cdb6109af64240f86d9c9c6583d927d 387 SUPERFAMILY SSF52440 171 277 5.18E-37 T 09-03-2017 IPR016185 Pre-ATP-grasp domain RG43_RS09300 d079ddf39c6ada599dfa5fbf06abc0fd 112 Pfam PF11776 Nickel/cobalt transporter regulator 52 101 9.0E-20 T 09-03-2017 IPR024572 Nickel/cobalt homeostasis protein RcnB RG43_RS09300 d079ddf39c6ada599dfa5fbf06abc0fd 112 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 27 101 4.0E-39 T 09-03-2017 IPR024572 Nickel/cobalt homeostasis protein RcnB RG43_RS23895 f822889b931b7b0f28a1ddd91991c529 119 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 1 119 4.0E-64 T 09-03-2017 IPR009867 Protein of unknown function DUF1422 RG43_RS23895 f822889b931b7b0f28a1ddd91991c529 119 Pfam PF07226 Protein of unknown function (DUF1422) 3 115 7.3E-54 T 09-03-2017 IPR009867 Protein of unknown function DUF1422 RG43_RS21365 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 Gene3D G3DSA:2.40.110.10 123 217 3.4E-23 T 09-03-2017 RG43_RS21365 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 Gene3D G3DSA:1.10.540.10 1 110 7.2E-19 T 09-03-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RG43_RS21365 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 108 1.1E-14 T 09-03-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RG43_RS21365 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 09-03-2017 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RG43_RS21365 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 SUPERFAMILY SSF47203 226 379 1.93E-45 T 09-03-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RG43_RS21365 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 215 1.9E-21 T 09-03-2017 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RG43_RS21365 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 Hamap MF_01052 Crotonobetainyl-CoA dehydrogenase [caiA]. 1 380 91.978 T 09-03-2017 IPR023450 Crotonobetainyl-CoA dehydrogenase CaiA GO:0009437|GO:0016627|GO:0055114 RG43_RS21365 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 Gene3D G3DSA:1.20.140.10 218 380 3.9E-51 T 09-03-2017 RG43_RS21365 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 376 5.0E-46 T 09-03-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RG43_RS21365 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 SUPERFAMILY SSF56645 1 227 3.27E-52 T 09-03-2017 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RG43_RS21365 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 334 353 - T 09-03-2017 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RG43_RS20600 46caa69780821a1c8b8b3d0bd5790569 151 Pfam PF07977 FabA-like domain 17 141 1.9E-40 T 09-03-2017 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 RG43_RS20600 46caa69780821a1c8b8b3d0bd5790569 151 SUPERFAMILY SSF54637 10 149 1.13E-50 T 09-03-2017 IPR029069 HotDog domain RG43_RS20600 46caa69780821a1c8b8b3d0bd5790569 151 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 146 2.4E-60 T 09-03-2017 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 RG43_RS20600 46caa69780821a1c8b8b3d0bd5790569 151 Gene3D G3DSA:3.10.129.10 4 147 5.6E-59 T 09-03-2017 IPR029069 HotDog domain RG43_RS20600 46caa69780821a1c8b8b3d0bd5790569 151 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 149 37.519 T 09-03-2017 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 RG43_RS23980 9b845aa8f2ac4376b1990a2e0b7a05a8 292 Gene3D G3DSA:3.30.70.20 47 93 6.4E-4 T 09-03-2017 RG43_RS23980 9b845aa8f2ac4376b1990a2e0b7a05a8 292 SUPERFAMILY SSF102114 99 252 2.35E-11 T 09-03-2017 RG43_RS23980 9b845aa8f2ac4376b1990a2e0b7a05a8 292 SUPERFAMILY SSF102114 35 67 2.35E-11 T 09-03-2017 RG43_RS23980 9b845aa8f2ac4376b1990a2e0b7a05a8 292 Pfam PF13353 4Fe-4S single cluster domain 34 144 3.0E-10 T 09-03-2017 RG43_RS23980 9b845aa8f2ac4376b1990a2e0b7a05a8 292 Gene3D G3DSA:3.80.30.10 116 291 1.6E-51 T 09-03-2017 RG43_RS23980 9b845aa8f2ac4376b1990a2e0b7a05a8 292 Pfam PF04055 Radical SAM superfamily 41 222 1.0E-22 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 RG43_RS23980 9b845aa8f2ac4376b1990a2e0b7a05a8 292 ProSitePatterns PS01087 Radical activating enzymes signature. 35 56 - T 09-03-2017 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 RG43_RS11950 fe58b922555047449ac3d5da6a292cd5 280 SUPERFAMILY SSF51182 25 161 3.38E-15 T 09-03-2017 IPR011051 RmlC-like cupin domain RG43_RS11950 fe58b922555047449ac3d5da6a292cd5 280 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 256 272 3.7E-6 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RG43_RS11950 fe58b922555047449ac3d5da6a292cd5 280 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 241 256 3.7E-6 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RG43_RS11950 fe58b922555047449ac3d5da6a292cd5 280 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 226 268 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RG43_RS11950 fe58b922555047449ac3d5da6a292cd5 280 SMART SM00342 189 272 3.0E-25 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS11950 fe58b922555047449ac3d5da6a292cd5 280 Gene3D G3DSA:1.10.10.60 224 274 2.3E-17 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS11950 fe58b922555047449ac3d5da6a292cd5 280 Gene3D G3DSA:2.60.120.10 26 100 5.3E-13 T 09-03-2017 IPR014710 RmlC-like jelly roll fold RG43_RS11950 fe58b922555047449ac3d5da6a292cd5 280 Pfam PF07883 Cupin domain 29 81 5.0E-8 T 09-03-2017 IPR013096 Cupin 2, conserved barrel RG43_RS11950 fe58b922555047449ac3d5da6a292cd5 280 Pfam PF12833 Helix-turn-helix domain 201 273 1.8E-19 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS11950 fe58b922555047449ac3d5da6a292cd5 280 SUPERFAMILY SSF46689 225 275 1.57E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS12165 107186c9dcb2e160a63496321ab08d53 531 PIRSF PIRSF000858 10 530 6.7E-208 T 09-03-2017 IPR014388 3-oxoacid CoA-transferase GO:0008410|GO:0046952 RG43_RS12165 107186c9dcb2e160a63496321ab08d53 531 Pfam PF01144 Coenzyme A transferase 16 252 5.8E-57 T 09-03-2017 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RG43_RS12165 107186c9dcb2e160a63496321ab08d53 531 Gene3D G3DSA:3.40.1080.10 15 252 2.2E-64 T 09-03-2017 RG43_RS12165 107186c9dcb2e160a63496321ab08d53 531 SUPERFAMILY SSF100950 15 264 2.34E-80 T 09-03-2017 RG43_RS12165 107186c9dcb2e160a63496321ab08d53 531 SMART SM00882 15 253 2.5E-49 T 09-03-2017 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RG43_RS12165 107186c9dcb2e160a63496321ab08d53 531 Gene3D G3DSA:3.40.810.20 287 510 3.0E-54 T 09-03-2017 RG43_RS12165 107186c9dcb2e160a63496321ab08d53 531 SUPERFAMILY SSF100950 284 523 3.48E-67 T 09-03-2017 RG43_RS06015 fb138dc92e5df4d32ebdbee8582d1f74 121 Gene3D G3DSA:3.30.479.10 2 121 1.7E-39 T 09-03-2017 RG43_RS06015 fb138dc92e5df4d32ebdbee8582d1f74 121 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 7 121 7.0E-34 T 09-03-2017 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 RG43_RS06015 fb138dc92e5df4d32ebdbee8582d1f74 121 TIGRFAM TIGR00039 6PTHBS: 6-pyruvoyl tetrahydropterin synthase/QueD family protein 4 120 3.0E-38 T 09-03-2017 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 RG43_RS06015 fb138dc92e5df4d32ebdbee8582d1f74 121 SUPERFAMILY SSF55620 1 120 1.78E-40 T 09-03-2017 RG43_RS06015 fb138dc92e5df4d32ebdbee8582d1f74 121 PIRSF PIRSF006113 1 121 1.0E-56 T 09-03-2017 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 RG43_RS06015 fb138dc92e5df4d32ebdbee8582d1f74 121 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 6 97 9.3E-33 T 09-03-2017 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 RG43_RS07120 858f1fe35d5f51a75188c72882269fe8 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 09-03-2017 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site RG43_RS07120 858f1fe35d5f51a75188c72882269fe8 404 PIRSF PIRSF005572 2 384 1.9E-144 T 09-03-2017 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 RG43_RS07120 858f1fe35d5f51a75188c72882269fe8 404 Gene3D G3DSA:3.90.1150.10 255 375 2.1E-52 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RG43_RS07120 858f1fe35d5f51a75188c72882269fe8 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 2.5E-236 T 09-03-2017 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 RG43_RS07120 858f1fe35d5f51a75188c72882269fe8 404 SUPERFAMILY SSF53383 5 391 4.52E-117 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS07120 858f1fe35d5f51a75188c72882269fe8 404 Gene3D G3DSA:3.40.640.10 17 254 3.7E-99 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS07120 858f1fe35d5f51a75188c72882269fe8 404 Pfam PF00266 Aminotransferase class-V 5 368 1.3E-89 T 09-03-2017 IPR000192 Aminotransferase class V domain RG43_RS07120 858f1fe35d5f51a75188c72882269fe8 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 56.355 T 09-03-2017 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 RG43_RS01075 1e2bb8632ee9c4a09280938d5b48fd23 334 Gene3D G3DSA:3.40.50.300 11 263 2.1E-81 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS01075 1e2bb8632ee9c4a09280938d5b48fd23 334 SUPERFAMILY SSF52540 13 261 5.09E-73 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS01075 1e2bb8632ee9c4a09280938d5b48fd23 334 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS01075 1e2bb8632ee9c4a09280938d5b48fd23 334 SMART SM00382 47 239 3.6E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS01075 1e2bb8632ee9c4a09280938d5b48fd23 334 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 241 306 6.6E-19 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RG43_RS01075 1e2bb8632ee9c4a09280938d5b48fd23 334 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 240 324 2.9E-25 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RG43_RS01075 1e2bb8632ee9c4a09280938d5b48fd23 334 Pfam PF00005 ABC transporter 38 189 7.4E-32 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS06265 2a7610b7f1490b9c85ba187f8fa17d82 608 Pfam PF00361 Proton-conducting membrane transporter 124 404 2.0E-38 T 09-03-2017 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS06265 2a7610b7f1490b9c85ba187f8fa17d82 608 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 154 178 7.8E-7 T 09-03-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS06265 2a7610b7f1490b9c85ba187f8fa17d82 608 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 373 399 7.8E-7 T 09-03-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS06265 2a7610b7f1490b9c85ba187f8fa17d82 608 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 321 340 7.8E-7 T 09-03-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS15460 90acb54a7be9e15b28df78160a126e03 276 SUPERFAMILY SSF103473 5 263 8.5E-6 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS15460 90acb54a7be9e15b28df78160a126e03 276 TIGRFAM TIGR00145 TIGR00145: FTR1 family protein 1 273 1.2E-105 T 09-03-2017 IPR005217 Iron permease FTR1-like GO:0005381|GO:0005886|GO:0006827|GO:0033573 RG43_RS15460 90acb54a7be9e15b28df78160a126e03 276 Pfam PF03239 Iron permease FTR1 family 1 274 1.4E-76 T 09-03-2017 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 RG43_RS00645 ec0f173f84422c782e8108f94dff41ed 319 SUPERFAMILY SSF88713 24 238 2.67E-71 T 09-03-2017 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RG43_RS00645 ec0f173f84422c782e8108f94dff41ed 319 Pfam PF04748 Divergent polysaccharide deacetylase 28 238 4.8E-74 T 09-03-2017 IPR006837 Divergent polysaccharide deacetylase RG43_RS00645 ec0f173f84422c782e8108f94dff41ed 319 Gene3D G3DSA:3.20.20.370 12 247 1.5E-108 T 09-03-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 RG43_RS18090 95856758bc910f75b955633a0b386897 65 Pfam PF04328 Protein of unknown function (DUF466) 5 65 8.7E-31 T 09-03-2017 IPR007423 Protein of unknown function DUF466 RG43_RS07145 e249c94755ee9bb00025226e77bb78bc 111 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 14 92 1.6E-15 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RG43_RS07145 e249c94755ee9bb00025226e77bb78bc 111 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 111 2.9E-63 T 09-03-2017 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 RG43_RS07145 e249c94755ee9bb00025226e77bb78bc 111 SUPERFAMILY SSF54292 4 109 1.66E-35 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RG43_RS07145 e249c94755ee9bb00025226e77bb78bc 111 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 09-03-2017 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 RG43_RS07145 e249c94755ee9bb00025226e77bb78bc 111 Gene3D G3DSA:3.10.20.30 5 108 1.4E-36 T 09-03-2017 IPR012675 Beta-grasp domain RG43_RS07145 e249c94755ee9bb00025226e77bb78bc 111 PRINTS PR00355 Adrenodoxin signature 42 52 1.2E-10 T 09-03-2017 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 RG43_RS07145 e249c94755ee9bb00025226e77bb78bc 111 PRINTS PR00355 Adrenodoxin signature 60 74 1.2E-10 T 09-03-2017 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 RG43_RS07145 e249c94755ee9bb00025226e77bb78bc 111 PRINTS PR00355 Adrenodoxin signature 83 91 1.2E-10 T 09-03-2017 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 RG43_RS09080 1ea1487f5835af2605168959f6cddd8c 412 SUPERFAMILY SSF51971 126 346 2.06E-48 T 09-03-2017 RG43_RS09080 1ea1487f5835af2605168959f6cddd8c 412 Gene3D G3DSA:1.10.1060.10 8 128 1.0E-34 T 09-03-2017 RG43_RS09080 1ea1487f5835af2605168959f6cddd8c 412 SUPERFAMILY SSF46548 9 135 1.41E-26 T 09-03-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 RG43_RS09080 1ea1487f5835af2605168959f6cddd8c 412 Gene3D G3DSA:3.40.50.720 129 267 4.6E-33 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS09080 1ea1487f5835af2605168959f6cddd8c 412 Gene3D G3DSA:3.50.50.60 268 407 1.0E-21 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS09080 1ea1487f5835af2605168959f6cddd8c 412 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 126 394 7.9E-26 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS09080 1ea1487f5835af2605168959f6cddd8c 412 PRINTS PR00419 Adrenodoxin reductase family signature 126 148 3.4E-17 T 09-03-2017 RG43_RS09080 1ea1487f5835af2605168959f6cddd8c 412 PRINTS PR00419 Adrenodoxin reductase family signature 149 162 3.4E-17 T 09-03-2017 RG43_RS09080 1ea1487f5835af2605168959f6cddd8c 412 PRINTS PR00419 Adrenodoxin reductase family signature 290 303 3.4E-17 T 09-03-2017 RG43_RS09080 1ea1487f5835af2605168959f6cddd8c 412 PRINTS PR00419 Adrenodoxin reductase family signature 256 270 3.4E-17 T 09-03-2017 RG43_RS09080 1ea1487f5835af2605168959f6cddd8c 412 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 7 113 3.9E-34 T 09-03-2017 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 RG43_RS16865 b13ad58ae55d9253eaf4c26bb07b51c9 109 Pfam PF05939 Phage minor tail protein 2 108 1.7E-36 T 09-03-2017 IPR010265 Bacteriophage lambda, GpM, minor tail RG43_RS24615 341c62d62a3e4a84cccbbb8efed4a5aa 336 Gene3D G3DSA:3.90.180.10 3 181 3.3E-49 T 09-03-2017 IPR011032 GroES-like RG43_RS24615 341c62d62a3e4a84cccbbb8efed4a5aa 336 SUPERFAMILY SSF50129 13 175 1.04E-45 T 09-03-2017 IPR011032 GroES-like RG43_RS24615 341c62d62a3e4a84cccbbb8efed4a5aa 336 SUPERFAMILY SSF51735 140 300 5.19E-27 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS24615 341c62d62a3e4a84cccbbb8efed4a5aa 336 SMART SM00829 14 331 0.0037 T 09-03-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RG43_RS24615 341c62d62a3e4a84cccbbb8efed4a5aa 336 Pfam PF00107 Zinc-binding dehydrogenase 177 295 8.1E-12 T 09-03-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RG43_RS24615 341c62d62a3e4a84cccbbb8efed4a5aa 336 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 134 2.6E-30 T 09-03-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RG43_RS24615 341c62d62a3e4a84cccbbb8efed4a5aa 336 Gene3D G3DSA:3.40.50.720 182 299 4.6E-22 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS10990 65a44ba834f47eea8d6d2cb512d0a1e9 474 SUPERFAMILY SSF53756 2 455 6.8E-148 T 09-03-2017 RG43_RS10990 65a44ba834f47eea8d6d2cb512d0a1e9 474 Gene3D G3DSA:3.40.50.2000 244 435 1.4E-75 T 09-03-2017 RG43_RS10990 65a44ba834f47eea8d6d2cb512d0a1e9 474 Gene3D G3DSA:3.40.50.2000 1 239 2.7E-74 T 09-03-2017 RG43_RS10990 65a44ba834f47eea8d6d2cb512d0a1e9 474 Pfam PF00982 Glycosyltransferase family 20 17 452 5.4E-152 T 09-03-2017 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 RG43_RS10990 65a44ba834f47eea8d6d2cb512d0a1e9 474 TIGRFAM TIGR02400 trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 3 453 8.1E-184 T 09-03-2017 IPR012766 Alpha,alpha-trehalose-phosphate synthase GO:0003825|GO:0005992 KEGG: 00500+2.4.1.15 RG43_RS12170 1bc36232f6babb150dd02556fe1fe296 252 SUPERFAMILY SSF51569 1 251 1.21E-82 T 09-03-2017 RG43_RS12170 1bc36232f6babb150dd02556fe1fe296 252 Hamap MF_00214 3-dehydroquinate dehydratase [aroD]. 17 249 41.714 T 09-03-2017 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 RG43_RS12170 1bc36232f6babb150dd02556fe1fe296 252 ProSitePatterns PS01028 Dehydroquinase class I active site. 114 144 - T 09-03-2017 IPR018508 3-dehydroquinate dehydratase, active site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 RG43_RS12170 1bc36232f6babb150dd02556fe1fe296 252 Pfam PF01487 Type I 3-dehydroquinase 20 246 4.1E-70 T 09-03-2017 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 RG43_RS12170 1bc36232f6babb150dd02556fe1fe296 252 Gene3D G3DSA:3.20.20.70 1 251 1.0E-91 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS12170 1bc36232f6babb150dd02556fe1fe296 252 TIGRFAM TIGR01093 aroD: 3-dehydroquinate dehydratase, type I 17 245 1.7E-87 T 09-03-2017 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 RG43_RS02240 59e6bec967a5efa3ac610513705f3fc0 119 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 3 119 2.0E-45 T 09-03-2017 IPR017462 Sulphur relay, TusC/DsrF RG43_RS02240 59e6bec967a5efa3ac610513705f3fc0 119 Pfam PF02635 DsrE/DsrF-like family 2 119 2.0E-23 T 09-03-2017 IPR003787 Sulphur relay, DsrE/F-like protein RG43_RS02240 59e6bec967a5efa3ac610513705f3fc0 119 Hamap MF_00389 Protein TusC [tusC]. 1 119 35.625 T 09-03-2017 IPR017462 Sulphur relay, TusC/DsrF RG43_RS02240 59e6bec967a5efa3ac610513705f3fc0 119 SUPERFAMILY SSF75169 1 119 3.27E-34 T 09-03-2017 IPR027396 DsrEFH-like RG43_RS02240 59e6bec967a5efa3ac610513705f3fc0 119 Gene3D G3DSA:3.40.1260.10 1 119 1.0E-47 T 09-03-2017 IPR027396 DsrEFH-like RG43_RS12590 de303e5c6280748368a3cc1bf2640c9f 457 SUPERFAMILY SSF103473 1 433 1.22E-36 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS12590 de303e5c6280748368a3cc1bf2640c9f 457 Gene3D G3DSA:1.20.1250.20 8 206 2.1E-10 T 09-03-2017 RG43_RS12590 de303e5c6280748368a3cc1bf2640c9f 457 Gene3D G3DSA:1.20.1250.20 226 433 2.9E-16 T 09-03-2017 RG43_RS12590 de303e5c6280748368a3cc1bf2640c9f 457 Pfam PF13347 MFS/sugar transport protein 12 431 1.8E-93 T 09-03-2017 RG43_RS12590 de303e5c6280748368a3cc1bf2640c9f 457 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 61 86 - T 09-03-2017 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 RG43_RS12590 de303e5c6280748368a3cc1bf2640c9f 457 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 11 444 7.7E-150 T 09-03-2017 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 RG43_RS20000 0c28af08f388c25fb707c1589e8a1b57 387 Pfam PF00589 Phage integrase family 185 353 1.2E-46 T 09-03-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RG43_RS20000 0c28af08f388c25fb707c1589e8a1b57 387 SUPERFAMILY SSF56349 57 361 5.3E-51 T 09-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RG43_RS20000 0c28af08f388c25fb707c1589e8a1b57 387 Gene3D G3DSA:1.10.443.10 181 367 7.6E-42 T 09-03-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RG43_RS21885 340cac06d2aea72718a20bf6080da886 39 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 7 36 4.6E-9 T 09-03-2017 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system RG43_RS08310 686577aac277f737d875fe198ea6460a 164 PIRSF PIRSF006272 1 164 2.9E-80 T 09-03-2017 IPR005587 Uncharacterised protein family UPF0304, YfbU RG43_RS08310 686577aac277f737d875fe198ea6460a 164 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 164 40.884 T 09-03-2017 IPR005587 Uncharacterised protein family UPF0304, YfbU RG43_RS08310 686577aac277f737d875fe198ea6460a 164 Gene3D G3DSA:1.10.3190.10 53 164 1.4E-51 T 09-03-2017 IPR023146 YfbU, alpha-helical bundle domain RG43_RS08310 686577aac277f737d875fe198ea6460a 164 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 164 1.0E-95 T 09-03-2017 IPR005587 Uncharacterised protein family UPF0304, YfbU RG43_RS08310 686577aac277f737d875fe198ea6460a 164 Pfam PF03887 YfbU domain 1 164 2.9E-69 T 09-03-2017 IPR005587 Uncharacterised protein family UPF0304, YfbU RG43_RS08310 686577aac277f737d875fe198ea6460a 164 Gene3D G3DSA:1.10.287.680 1 52 2.4E-31 T 09-03-2017 IPR023145 YfbU, helix-hairpin domain RG43_RS08310 686577aac277f737d875fe198ea6460a 164 SUPERFAMILY SSF116960 1 164 1.1E-70 T 09-03-2017 RG43_RS24645 b8db6f2e383b30bfeaba21ab572d8cdc 326 Gene3D G3DSA:3.20.20.150 37 242 3.3E-28 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain RG43_RS24645 b8db6f2e383b30bfeaba21ab572d8cdc 326 Pfam PF01261 Xylose isomerase-like TIM barrel 41 213 9.0E-11 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain RG43_RS24645 b8db6f2e383b30bfeaba21ab572d8cdc 326 SUPERFAMILY SSF51658 37 260 1.46E-19 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain RG43_RS13260 a8ae351ffc440a48a33d0e347fc51706 109 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 16 76 5.9E-20 T 09-03-2017 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 RG43_RS04850 9496d1e83f94bd5417f9249031166336 251 SUPERFAMILY SSF56925 29 251 9.68E-28 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RG43_RS04850 9496d1e83f94bd5417f9249031166336 251 Gene3D G3DSA:2.40.160.20 29 251 2.8E-37 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RG43_RS04850 9496d1e83f94bd5417f9249031166336 251 Pfam PF13505 Outer membrane protein beta-barrel domain 12 251 5.8E-23 T 09-03-2017 IPR027385 Outer membrane protein beta-barrel RG43_RS22475 92a880c26e66b0055997f331fc5006f7 513 Gene3D G3DSA:3.40.1080.10 2 241 9.0E-61 T 09-03-2017 RG43_RS22475 92a880c26e66b0055997f331fc5006f7 513 SMART SM00882 4 242 2.0E-59 T 09-03-2017 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RG43_RS22475 92a880c26e66b0055997f331fc5006f7 513 SUPERFAMILY SSF100950 276 504 1.5E-59 T 09-03-2017 RG43_RS22475 92a880c26e66b0055997f331fc5006f7 513 Pfam PF01144 Coenzyme A transferase 6 241 5.0E-26 T 09-03-2017 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RG43_RS22475 92a880c26e66b0055997f331fc5006f7 513 Gene3D G3DSA:3.40.810.20 277 498 1.8E-59 T 09-03-2017 RG43_RS22475 92a880c26e66b0055997f331fc5006f7 513 PIRSF PIRSF000858 1 513 8.4E-195 T 09-03-2017 IPR014388 3-oxoacid CoA-transferase GO:0008410|GO:0046952 RG43_RS22475 92a880c26e66b0055997f331fc5006f7 513 SUPERFAMILY SSF100950 3 256 3.81E-79 T 09-03-2017 RG43_RS09715 a8a5a1ea343d63ae2a6df946d8144447 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 169 2.9E-34 T 09-03-2017 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 RG43_RS09715 a8a5a1ea343d63ae2a6df946d8144447 388 PIRSF PIRSF000124 1 388 1.2E-136 T 09-03-2017 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 RG43_RS09715 a8a5a1ea343d63ae2a6df946d8144447 388 Gene3D G3DSA:3.40.50.720 285 388 8.6E-50 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS09715 a8a5a1ea343d63ae2a6df946d8144447 388 SMART SM00984 300 387 6.4E-12 T 09-03-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 RG43_RS09715 a8a5a1ea343d63ae2a6df946d8144447 388 SUPERFAMILY SSF52413 283 388 1.96E-26 T 09-03-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 RG43_RS09715 a8a5a1ea343d63ae2a6df946d8144447 388 SUPERFAMILY SSF51735 1 194 7.37E-50 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS09715 a8a5a1ea343d63ae2a6df946d8144447 388 Gene3D G3DSA:3.40.50.720 1 197 7.1E-69 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS09715 a8a5a1ea343d63ae2a6df946d8144447 388 PIRSF PIRSF500134 1 343 1.1E-119 T 09-03-2017 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346 RG43_RS09715 a8a5a1ea343d63ae2a6df946d8144447 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 7.8E-104 T 09-03-2017 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 RG43_RS09715 a8a5a1ea343d63ae2a6df946d8144447 388 Gene3D G3DSA:1.10.1040.10 198 284 2.1E-35 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RG43_RS09715 a8a5a1ea343d63ae2a6df946d8144447 388 SUPERFAMILY SSF48179 191 287 2.89E-30 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RG43_RS09715 a8a5a1ea343d63ae2a6df946d8144447 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 1.4E-26 T 09-03-2017 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 RG43_RS23955 4a1eaf83d91166f4b101af5247342738 383 SUPERFAMILY SSF53187 305 381 2.71E-59 T 09-03-2017 RG43_RS23955 4a1eaf83d91166f4b101af5247342738 383 SUPERFAMILY SSF53187 5 180 2.71E-59 T 09-03-2017 RG43_RS23955 4a1eaf83d91166f4b101af5247342738 383 SUPERFAMILY SSF55031 181 295 4.19E-21 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain RG43_RS23955 4a1eaf83d91166f4b101af5247342738 383 Pfam PF07687 Peptidase dimerisation domain 178 288 2.4E-25 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain RG43_RS23955 4a1eaf83d91166f4b101af5247342738 383 Hamap MF_01108 Acetylornithine deacetylase [argE]. 3 382 68.013 T 09-03-2017 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 RG43_RS23955 4a1eaf83d91166f4b101af5247342738 383 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 10 377 3.4E-174 T 09-03-2017 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 RG43_RS23955 4a1eaf83d91166f4b101af5247342738 383 Gene3D G3DSA:3.30.70.360 190 290 2.4E-26 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain RG43_RS23955 4a1eaf83d91166f4b101af5247342738 383 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 110 147 - T 09-03-2017 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 RG43_RS23955 4a1eaf83d91166f4b101af5247342738 383 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 75 84 - T 09-03-2017 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 RG43_RS23955 4a1eaf83d91166f4b101af5247342738 383 Gene3D G3DSA:3.40.630.10 5 189 1.7E-63 T 09-03-2017 RG43_RS23955 4a1eaf83d91166f4b101af5247342738 383 Gene3D G3DSA:3.40.630.10 323 381 1.7E-63 T 09-03-2017 RG43_RS23955 4a1eaf83d91166f4b101af5247342738 383 Pfam PF01546 Peptidase family M20/M25/M40 76 377 2.0E-33 T 09-03-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RG43_RS01610 5102465b6449ac877bf3b68460a721b2 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 26 42 3.6E-68 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RG43_RS01610 5102465b6449ac877bf3b68460a721b2 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 88 98 3.6E-68 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RG43_RS01610 5102465b6449ac877bf3b68460a721b2 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 277 290 3.6E-68 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RG43_RS01610 5102465b6449ac877bf3b68460a721b2 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 48 64 3.6E-68 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RG43_RS01610 5102465b6449ac877bf3b68460a721b2 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 329 344 3.6E-68 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RG43_RS01610 5102465b6449ac877bf3b68460a721b2 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 254 272 3.6E-68 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RG43_RS01610 5102465b6449ac877bf3b68460a721b2 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 67 85 3.6E-68 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RG43_RS01610 5102465b6449ac877bf3b68460a721b2 369 Gene3D G3DSA:3.40.50.2300 24 224 2.8E-66 T 09-03-2017 RG43_RS01610 5102465b6449ac877bf3b68460a721b2 369 Pfam PF13458 Periplasmic binding protein 26 363 1.1E-61 T 09-03-2017 IPR028081 Leucine-binding protein domain RG43_RS01610 5102465b6449ac877bf3b68460a721b2 369 SUPERFAMILY SSF53822 24 364 3.53E-90 T 09-03-2017 IPR028082 Periplasmic binding protein-like I RG43_RS08515 d67facdd9926113f452c9434af0f6adb 141 SUPERFAMILY SSF55811 2 126 4.47E-26 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 RG43_RS08515 d67facdd9926113f452c9434af0f6adb 141 PRINTS PR00502 NUDIX hydrolase family signature 33 47 2.5E-6 T 09-03-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 RG43_RS08515 d67facdd9926113f452c9434af0f6adb 141 PRINTS PR00502 NUDIX hydrolase family signature 47 62 2.5E-6 T 09-03-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 RG43_RS08515 d67facdd9926113f452c9434af0f6adb 141 Gene3D G3DSA:3.90.79.10 4 125 2.6E-24 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 RG43_RS08515 d67facdd9926113f452c9434af0f6adb 141 Hamap MF_01846 Nucleoside triphosphatase NudI [nudI]. 1 141 51.786 T 09-03-2017 IPR023781 Nucleoside triphosphatase NudI GO:0016818 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.23+3.6.1.19+3.6.1.12|KEGG: 00983+3.6.1.19|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206 RG43_RS08515 d67facdd9926113f452c9434af0f6adb 141 Pfam PF00293 NUDIX domain 2 135 4.1E-21 T 09-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 RG43_RS08515 d67facdd9926113f452c9434af0f6adb 141 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 09-03-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RG43_RS01460 b95a98b02319bf14363ba7c8681a7a2e 355 Pfam PF13533 Biotin-lipoyl like 48 94 1.3E-10 T 09-03-2017 RG43_RS01460 b95a98b02319bf14363ba7c8681a7a2e 355 SUPERFAMILY SSF111369 189 286 3.53E-5 T 09-03-2017 RG43_RS01460 b95a98b02319bf14363ba7c8681a7a2e 355 SUPERFAMILY SSF111369 41 112 3.01E-8 T 09-03-2017 RG43_RS01460 b95a98b02319bf14363ba7c8681a7a2e 355 Pfam PF13437 HlyD family secretion protein 214 318 5.4E-13 T 09-03-2017 RG43_RS01460 b95a98b02319bf14363ba7c8681a7a2e 355 Gene3D G3DSA:2.40.50.100 47 80 1.8E-13 T 09-03-2017 RG43_RS01460 b95a98b02319bf14363ba7c8681a7a2e 355 Gene3D G3DSA:2.40.50.100 211 244 1.8E-13 T 09-03-2017 RG43_RS01460 b95a98b02319bf14363ba7c8681a7a2e 355 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 327 342 4.1E-6 T 09-03-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 RG43_RS01460 b95a98b02319bf14363ba7c8681a7a2e 355 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 58 78 4.1E-6 T 09-03-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 RG43_RS10900 a52a7859fbfd934bc77137489798d420 182 Hamap MF_01437 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [pgsA]. 1 182 34.88 T 09-03-2017 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668 RG43_RS10900 a52a7859fbfd934bc77137489798d420 182 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3 181 1.6E-66 T 09-03-2017 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668 RG43_RS10900 a52a7859fbfd934bc77137489798d420 182 PIRSF PIRSF000847 1 179 7.2E-43 T 09-03-2017 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668 RG43_RS10900 a52a7859fbfd934bc77137489798d420 182 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 7.9E-18 T 09-03-2017 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RG43_RS10900 a52a7859fbfd934bc77137489798d420 182 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 09-03-2017 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RG43_RS21895 3418f3879b026e5eecadf636668ebf09 539 SUPERFAMILY SSF53335 15 538 1.63E-135 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS21895 3418f3879b026e5eecadf636668ebf09 539 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 208 222 3.2E-18 T 09-03-2017 RG43_RS21895 3418f3879b026e5eecadf636668ebf09 539 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 185 201 3.2E-18 T 09-03-2017 RG43_RS21895 3418f3879b026e5eecadf636668ebf09 539 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 318 342 3.2E-18 T 09-03-2017 RG43_RS21895 3418f3879b026e5eecadf636668ebf09 539 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 282 294 3.2E-18 T 09-03-2017 RG43_RS21895 3418f3879b026e5eecadf636668ebf09 539 Gene3D G3DSA:3.40.50.150 187 418 3.0E-29 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS21895 3418f3879b026e5eecadf636668ebf09 539 Pfam PF12161 HsdM N-terminal domain 16 144 5.2E-24 T 09-03-2017 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain RG43_RS21895 3418f3879b026e5eecadf636668ebf09 539 Pfam PF02384 N-6 DNA Methylase 161 499 4.5E-110 T 09-03-2017 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 RG43_RS21895 3418f3879b026e5eecadf636668ebf09 539 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 285 291 - T 09-03-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RG43_RS21020 e774b4bd360a8560af7557b6b005cc1c 347 SMART SM01240 7 347 2.2E-139 T 09-03-2017 RG43_RS21020 e774b4bd360a8560af7557b6b005cc1c 347 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 338 3.5E-78 T 09-03-2017 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 RG43_RS21020 e774b4bd360a8560af7557b6b005cc1c 347 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 1.7E-214 T 09-03-2017 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 RG43_RS21020 e774b4bd360a8560af7557b6b005cc1c 347 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 09-03-2017 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 RG43_RS21020 e774b4bd360a8560af7557b6b005cc1c 347 Gene3D G3DSA:3.20.20.70 2 342 9.3E-112 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS21020 e774b4bd360a8560af7557b6b005cc1c 347 SUPERFAMILY SSF51412 6 336 8.11E-100 T 09-03-2017 RG43_RS21020 e774b4bd360a8560af7557b6b005cc1c 347 Hamap MF_00596 GMP reductase [guaC]. 1 345 55.971 T 09-03-2017 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 RG43_RS21020 e774b4bd360a8560af7557b6b005cc1c 347 PIRSF PIRSF000235 1 347 7.1E-200 T 09-03-2017 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 RG43_RS21300 10af8e029d2976e91ee59bcb09e86b15 125 SUPERFAMILY SSF110069 5 125 2.09E-48 T 09-03-2017 IPR007474 ApaG domain RG43_RS21300 10af8e029d2976e91ee59bcb09e86b15 125 Hamap MF_00791 Protein ApaG [apaG]. 1 125 33.655 T 09-03-2017 IPR023065 Uncharacterised protein family ApaG RG43_RS21300 10af8e029d2976e91ee59bcb09e86b15 125 Pfam PF04379 Protein of unknown function (DUF525) 18 102 1.9E-33 T 09-03-2017 IPR007474 ApaG domain RG43_RS21300 10af8e029d2976e91ee59bcb09e86b15 125 Gene3D G3DSA:2.60.40.1470 6 125 4.6E-46 T 09-03-2017 IPR007474 ApaG domain RG43_RS13920 527e3a2b3bcb43092428dbf369863c70 81 ProDom PD059807 YMJA ECS1872 1 81 7.0E-41 T 09-03-2017 IPR020251 Uncharacterised protein family, YmjA RG43_RS13920 527e3a2b3bcb43092428dbf369863c70 81 Pfam PF10820 Protein of unknown function (DUF2543) 1 81 1.7E-47 T 09-03-2017 IPR020251 Uncharacterised protein family, YmjA RG43_RS14700 428476f76776efe280c6a6c7acde0733 133 Gene3D G3DSA:2.60.120.380 37 130 3.0E-5 T 09-03-2017 RG43_RS14700 428476f76776efe280c6a6c7acde0733 133 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 48 111 2.5E-7 T 09-03-2017 IPR007280 Peptidase, C-terminal, archaeal/bacterial RG43_RS04785 013e3febec0b67f497e394dc70618110 843 SUPERFAMILY SSF141729 34 162 6.54E-27 T 09-03-2017 RG43_RS04785 013e3febec0b67f497e394dc70618110 843 Pfam PF13953 PapC C-terminal domain 769 824 8.7E-15 T 09-03-2017 IPR025949 PapC-like, C-terminal domain RG43_RS04785 013e3febec0b67f497e394dc70618110 843 Pfam PF13954 PapC N-terminal domain 36 188 6.7E-36 T 09-03-2017 IPR025885 PapC, N-terminal domain GO:0005515 RG43_RS04785 013e3febec0b67f497e394dc70618110 843 Pfam PF00577 Outer membrane usher protein 204 757 6.6E-166 T 09-03-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 RG43_RS04785 013e3febec0b67f497e394dc70618110 843 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 322 332 - T 09-03-2017 IPR018030 Fimbrial membrane usher, conserved site RG43_RS25515 35bab65849b37f27d224829abaa874fa 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 304 1.8E-17 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS25515 35bab65849b37f27d224829abaa874fa 319 SUPERFAMILY SSF161098 27 303 1.3E-32 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS25515 35bab65849b37f27d224829abaa874fa 319 Gene3D G3DSA:1.10.3720.10 25 316 5.3E-36 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS25515 35bab65849b37f27d224829abaa874fa 319 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 18 311 2.2E-92 T 09-03-2017 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 RG43_RS23705 879ad00cedf9a671b268009d65d7016e 223 Pfam PF04493 Endonuclease V 12 206 2.8E-73 T 09-03-2017 IPR007581 Endonuclease V GO:0004519|GO:0006281 RG43_RS23705 879ad00cedf9a671b268009d65d7016e 223 Hamap MF_00801 Endonuclease V [nfi]. 2 216 35.446 T 09-03-2017 IPR007581 Endonuclease V GO:0004519|GO:0006281 RG43_RS21820 30e3448a9ecd0bcc581fef3df9ed82b0 318 Pfam PF07690 Major Facilitator Superfamily 47 318 9.9E-53 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS21820 30e3448a9ecd0bcc581fef3df9ed82b0 318 Gene3D G3DSA:1.20.1250.20 39 221 1.3E-48 T 09-03-2017 RG43_RS21820 30e3448a9ecd0bcc581fef3df9ed82b0 318 Gene3D G3DSA:1.20.1250.20 249 318 3.9E-12 T 09-03-2017 RG43_RS21820 30e3448a9ecd0bcc581fef3df9ed82b0 318 SUPERFAMILY SSF103473 29 318 2.35E-63 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS08090 fe3d4e043c943f79000ae4dfe2a0a67a 249 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 170 227 7.5E-10 T 09-03-2017 IPR016148 Pili assembly chaperone, C-terminal RG43_RS08090 fe3d4e043c943f79000ae4dfe2a0a67a 249 SUPERFAMILY SSF49354 28 146 4.19E-37 T 09-03-2017 IPR008962 PapD-like RG43_RS08090 fe3d4e043c943f79000ae4dfe2a0a67a 249 PRINTS PR00969 Pili chaperone signature 165 180 3.8E-30 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS08090 fe3d4e043c943f79000ae4dfe2a0a67a 249 PRINTS PR00969 Pili chaperone signature 29 38 3.8E-30 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS08090 fe3d4e043c943f79000ae4dfe2a0a67a 249 PRINTS PR00969 Pili chaperone signature 105 122 3.8E-30 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS08090 fe3d4e043c943f79000ae4dfe2a0a67a 249 PRINTS PR00969 Pili chaperone signature 75 96 3.8E-30 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS08090 fe3d4e043c943f79000ae4dfe2a0a67a 249 PRINTS PR00969 Pili chaperone signature 128 143 3.8E-30 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS08090 fe3d4e043c943f79000ae4dfe2a0a67a 249 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 104 121 - T 09-03-2017 IPR018046 Pili assembly chaperone, conserved site RG43_RS08090 fe3d4e043c943f79000ae4dfe2a0a67a 249 SUPERFAMILY SSF49584 153 241 2.49E-23 T 09-03-2017 IPR016148 Pili assembly chaperone, C-terminal RG43_RS08090 fe3d4e043c943f79000ae4dfe2a0a67a 249 Gene3D G3DSA:2.60.40.1070 151 240 1.0E-27 T 09-03-2017 IPR016148 Pili assembly chaperone, C-terminal RG43_RS08090 fe3d4e043c943f79000ae4dfe2a0a67a 249 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 29 146 1.7E-37 T 09-03-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 RG43_RS08090 fe3d4e043c943f79000ae4dfe2a0a67a 249 Gene3D G3DSA:2.60.40.360 28 146 6.9E-44 T 09-03-2017 IPR008962 PapD-like RG43_RS17830 b954b1368a2ab9c817c8d97ca193944a 625 SUPERFAMILY SSF51004 539 591 2.49E-36 T 09-03-2017 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain RG43_RS17830 b954b1368a2ab9c817c8d97ca193944a 625 SUPERFAMILY SSF51004 294 493 2.49E-36 T 09-03-2017 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain RG43_RS17830 b954b1368a2ab9c817c8d97ca193944a 625 Gene3D G3DSA:2.130.10.10 424 592 2.7E-13 T 09-03-2017 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RG43_RS17830 b954b1368a2ab9c817c8d97ca193944a 625 Gene3D G3DSA:2.130.10.10 297 423 2.4E-25 T 09-03-2017 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RG43_RS17830 b954b1368a2ab9c817c8d97ca193944a 625 Pfam PF01694 Rhomboid family 58 202 6.4E-30 T 09-03-2017 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 RG43_RS17830 b954b1368a2ab9c817c8d97ca193944a 625 SUPERFAMILY SSF144091 12 204 6.41E-39 T 09-03-2017 RG43_RS17830 b954b1368a2ab9c817c8d97ca193944a 625 Gene3D G3DSA:1.20.1540.10 13 200 4.7E-38 T 09-03-2017 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 RG43_RS17175 6400a7434ca10af7c568a96f0e59adff 272 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 267 1.9E-72 T 09-03-2017 IPR000150 Cof protein GO:0016787 RG43_RS17175 6400a7434ca10af7c568a96f0e59adff 272 SUPERFAMILY SSF56784 1 271 1.4E-63 T 09-03-2017 IPR023214 HAD-like domain RG43_RS17175 6400a7434ca10af7c568a96f0e59adff 272 Gene3D G3DSA:3.40.50.1000 1 73 3.8E-50 T 09-03-2017 IPR023214 HAD-like domain RG43_RS17175 6400a7434ca10af7c568a96f0e59adff 272 Gene3D G3DSA:3.40.50.1000 176 271 3.8E-50 T 09-03-2017 IPR023214 HAD-like domain RG43_RS17175 6400a7434ca10af7c568a96f0e59adff 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 267 1.4E-64 T 09-03-2017 IPR023214 HAD-like domain RG43_RS17175 6400a7434ca10af7c568a96f0e59adff 272 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 09-03-2017 IPR000150 Cof protein GO:0016787 RG43_RS17175 6400a7434ca10af7c568a96f0e59adff 272 ProSitePatterns PS01229 Hypothetical cof family signature 2. 221 243 - T 09-03-2017 RG43_RS17175 6400a7434ca10af7c568a96f0e59adff 272 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 240 1.4E-21 T 09-03-2017 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 RG43_RS09620 d3b083b2ebb680fe65337744d3ba36f4 426 TIGRFAM TIGR04006 wcaK: colanic acid biosynthesis pyruvyl transferase WcaK 1 426 2.1E-281 T 09-03-2017 IPR023918 Colanic acid biosynthesis, pyruvyl transferase, WcaK RG43_RS09620 d3b083b2ebb680fe65337744d3ba36f4 426 Pfam PF04230 Polysaccharide pyruvyl transferase 13 356 1.8E-39 T 09-03-2017 IPR007345 Polysaccharide pyruvyl transferase RG43_RS01505 9368fd7f0d80364df6cce6b7e5c2b77b 314 TIGRFAM TIGR02789 nickel_nikB: nickel ABC transporter, permease subunit NikB 1 314 7.5E-170 T 09-03-2017 IPR014156 Nickel ABC transporter, permease subunit NikB GO:0015099|GO:0035444 RG43_RS01505 9368fd7f0d80364df6cce6b7e5c2b77b 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 308 4.2E-44 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS01505 9368fd7f0d80364df6cce6b7e5c2b77b 314 SUPERFAMILY SSF161098 94 308 4.58E-21 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS01505 9368fd7f0d80364df6cce6b7e5c2b77b 314 Gene3D G3DSA:1.10.3720.10 89 304 1.4E-25 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS00395 3224aacffb1e04d3b90a4bb3f83f0fa7 394 Gene3D G3DSA:1.10.443.10 206 375 1.5E-26 T 09-03-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RG43_RS00395 3224aacffb1e04d3b90a4bb3f83f0fa7 394 SUPERFAMILY SSF56349 98 380 1.24E-64 T 09-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RG43_RS00395 3224aacffb1e04d3b90a4bb3f83f0fa7 394 Gene3D G3DSA:1.10.150.130 98 193 1.1E-17 T 09-03-2017 IPR023109 Integrase/recombinase, N-terminal RG43_RS00395 3224aacffb1e04d3b90a4bb3f83f0fa7 394 Pfam PF00589 Phage integrase family 206 370 3.7E-26 T 09-03-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RG43_RS00395 3224aacffb1e04d3b90a4bb3f83f0fa7 394 Pfam PF13356 Domain of unknown function (DUF4102) 3 88 4.5E-20 T 09-03-2017 IPR025166 Domain of unknown function DUF4102 RG43_RS16510 f015eda5470af793d112f9cf3e667ad3 810 Pfam PF02901 Pyruvate formate lyase-like 10 671 1.5E-213 T 09-03-2017 IPR004184 Pyruvate formate lyase domain GO:0003824 RG43_RS16510 f015eda5470af793d112f9cf3e667ad3 810 SUPERFAMILY SSF51998 7 808 3.66E-233 T 09-03-2017 RG43_RS16510 f015eda5470af793d112f9cf3e667ad3 810 ProSitePatterns PS00850 Glycine radical domain signature. 781 789 - T 09-03-2017 IPR019777 Formate C-acetyltransferase glycine radical, conserved site RG43_RS16510 f015eda5470af793d112f9cf3e667ad3 810 PIRSF PIRSF000379 55 810 3.8E-200 T 09-03-2017 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 RG43_RS16510 f015eda5470af793d112f9cf3e667ad3 810 Pfam PF01228 Glycine radical 688 791 7.7E-30 T 09-03-2017 IPR001150 Glycine radical domain GO:0003824|GO:0008152 RG43_RS16510 f015eda5470af793d112f9cf3e667ad3 810 Gene3D G3DSA:3.20.70.20 8 808 1.2E-269 T 09-03-2017 RG43_RS16510 f015eda5470af793d112f9cf3e667ad3 810 TIGRFAM TIGR01774 PFL2-3: glycyl radical enzyme, PFL2/glycerol dehydratase family 8 810 0.0 T 09-03-2017 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 RG43_RS13875 35331dab9f81923819e76c833057dde5 222 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 219 1.9E-92 T 09-03-2017 IPR014319 Phage shock protein, PspA RG43_RS13875 35331dab9f81923819e76c833057dde5 222 Pfam PF04012 PspA/IM30 family 2 216 7.1E-48 T 09-03-2017 IPR007157 PspA/IM30 RG43_RS02525 5cb14e29041237ecb94566ebb000e1c8 169 PIRSF PIRSF004749 1 168 3.7E-55 T 09-03-2017 IPR023635 Peptide deformylase RG43_RS02525 5cb14e29041237ecb94566ebb000e1c8 169 Gene3D G3DSA:3.90.45.10 5 165 1.8E-63 T 09-03-2017 IPR023635 Peptide deformylase RG43_RS02525 5cb14e29041237ecb94566ebb000e1c8 169 Hamap MF_00163 Peptide deformylase [def]. 2 162 32.13 T 09-03-2017 IPR023635 Peptide deformylase RG43_RS02525 5cb14e29041237ecb94566ebb000e1c8 169 PRINTS PR01576 Peptide deformylase signature 101 119 7.9E-39 T 09-03-2017 IPR023635 Peptide deformylase RG43_RS02525 5cb14e29041237ecb94566ebb000e1c8 169 PRINTS PR01576 Peptide deformylase signature 89 100 7.9E-39 T 09-03-2017 IPR023635 Peptide deformylase RG43_RS02525 5cb14e29041237ecb94566ebb000e1c8 169 PRINTS PR01576 Peptide deformylase signature 33 62 7.9E-39 T 09-03-2017 IPR023635 Peptide deformylase RG43_RS02525 5cb14e29041237ecb94566ebb000e1c8 169 PRINTS PR01576 Peptide deformylase signature 120 149 7.9E-39 T 09-03-2017 IPR023635 Peptide deformylase RG43_RS02525 5cb14e29041237ecb94566ebb000e1c8 169 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 2.3E-66 T 09-03-2017 IPR023635 Peptide deformylase RG43_RS02525 5cb14e29041237ecb94566ebb000e1c8 169 SUPERFAMILY SSF56420 3 164 1.23E-61 T 09-03-2017 IPR023635 Peptide deformylase RG43_RS02525 5cb14e29041237ecb94566ebb000e1c8 169 Pfam PF01327 Polypeptide deformylase 4 152 1.9E-50 T 09-03-2017 IPR023635 Peptide deformylase RG43_RS00075 11bfa25c2ddcd65cb4263b1eab1be190 317 PIRSF PIRSF018266 4 317 1.4E-88 T 09-03-2017 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component RG43_RS00075 11bfa25c2ddcd65cb4263b1eab1be190 317 Pfam PF16344 Domain of unknown function (DUF4974) 219 305 1.4E-7 T 09-03-2017 IPR032508 Protein FecR, C-terminal RG43_RS00075 11bfa25c2ddcd65cb4263b1eab1be190 317 Pfam PF04773 FecR protein 110 202 2.2E-16 T 09-03-2017 IPR006860 FecR protein RG43_RS00075 11bfa25c2ddcd65cb4263b1eab1be190 317 Pfam PF16220 Domain of unknown function (DUF4880) 15 56 4.7E-9 T 09-03-2017 IPR032623 FecR, N-terminal RG43_RS25005 c8902407c57bf8d449eeec688878466d 289 Pfam PF02253 Phospholipase A1 43 285 2.3E-89 T 09-03-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 RG43_RS25005 c8902407c57bf8d449eeec688878466d 289 SUPERFAMILY SSF56931 39 288 2.48E-92 T 09-03-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 RG43_RS25005 c8902407c57bf8d449eeec688878466d 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 126 145 1.1E-87 T 09-03-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 RG43_RS25005 c8902407c57bf8d449eeec688878466d 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 103 119 1.1E-87 T 09-03-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 RG43_RS25005 c8902407c57bf8d449eeec688878466d 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 236 253 1.1E-87 T 09-03-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 RG43_RS25005 c8902407c57bf8d449eeec688878466d 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 171 189 1.1E-87 T 09-03-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 RG43_RS25005 c8902407c57bf8d449eeec688878466d 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 81 98 1.1E-87 T 09-03-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 RG43_RS25005 c8902407c57bf8d449eeec688878466d 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 258 278 1.1E-87 T 09-03-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 RG43_RS25005 c8902407c57bf8d449eeec688878466d 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 156 170 1.1E-87 T 09-03-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 RG43_RS25005 c8902407c57bf8d449eeec688878466d 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 203 221 1.1E-87 T 09-03-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 RG43_RS25005 c8902407c57bf8d449eeec688878466d 289 Gene3D G3DSA:2.40.230.10 37 288 1.1E-101 T 09-03-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 RG43_RS08105 8150524d33ebef2567b37bb362cbcb55 174 Pfam PF00419 Fimbrial protein 28 173 1.5E-18 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS08105 8150524d33ebef2567b37bb362cbcb55 174 SUPERFAMILY SSF49401 26 173 2.44E-28 T 09-03-2017 IPR008966 Adhesion domain RG43_RS08105 8150524d33ebef2567b37bb362cbcb55 174 Gene3D G3DSA:2.60.40.1090 26 173 8.8E-35 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS05480 24a8c264da3b244a3a2a92a06ad1beaa 278 Pfam PF04962 KduI/IolB family 31 273 2.5E-42 T 09-03-2017 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 RG43_RS05480 24a8c264da3b244a3a2a92a06ad1beaa 278 Hamap MF_00687 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [kduI]. 1 278 56.991 T 09-03-2017 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 RG43_RS05480 24a8c264da3b244a3a2a92a06ad1beaa 278 PIRSF PIRSF006625 1 278 1.9E-134 T 09-03-2017 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 RG43_RS05480 24a8c264da3b244a3a2a92a06ad1beaa 278 Gene3D G3DSA:2.60.120.520 20 133 1.8E-57 T 09-03-2017 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal domain KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 RG43_RS05480 24a8c264da3b244a3a2a92a06ad1beaa 278 Gene3D G3DSA:2.60.120.500 134 278 3.5E-79 T 09-03-2017 IPR027447 5-keto-4-deoxyuronate isomerase, C-terminal domain KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 RG43_RS05480 24a8c264da3b244a3a2a92a06ad1beaa 278 SUPERFAMILY SSF51182 2 262 1.29E-109 T 09-03-2017 IPR011051 RmlC-like cupin domain RG43_RS08350 f9cf5ef975a24d6cd284ebce2bd80383 220 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 144 160 - T 09-03-2017 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08350 f9cf5ef975a24d6cd284ebce2bd80383 220 SUPERFAMILY SSF56770 35 185 2.09E-65 T 09-03-2017 RG43_RS08350 f9cf5ef975a24d6cd284ebce2bd80383 220 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 64 170 3.4E-22 T 09-03-2017 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08350 f9cf5ef975a24d6cd284ebce2bd80383 220 Gene3D G3DSA:3.40.50.700 47 174 5.6E-32 T 09-03-2017 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08350 f9cf5ef975a24d6cd284ebce2bd80383 220 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 27 177 42.699 T 09-03-2017 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08350 f9cf5ef975a24d6cd284ebce2bd80383 220 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 37 178 8.0E-71 T 09-03-2017 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS17165 8bd02d7e2067704bed00d76c3daa39ec 317 SUPERFAMILY SSF46785 4 112 3.39E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS17165 8bd02d7e2067704bed00d76c3daa39ec 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.7E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS17165 8bd02d7e2067704bed00d76c3daa39ec 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.7E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS17165 8bd02d7e2067704bed00d76c3daa39ec 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.7E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS17165 8bd02d7e2067704bed00d76c3daa39ec 317 Gene3D G3DSA:3.40.190.10 178 265 7.4E-20 T 09-03-2017 RG43_RS17165 8bd02d7e2067704bed00d76c3daa39ec 317 Gene3D G3DSA:1.10.10.10 4 88 1.5E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS17165 8bd02d7e2067704bed00d76c3daa39ec 317 SUPERFAMILY SSF53850 92 296 9.96E-42 T 09-03-2017 RG43_RS17165 8bd02d7e2067704bed00d76c3daa39ec 317 Pfam PF03466 LysR substrate binding domain 91 291 4.1E-43 T 09-03-2017 IPR005119 LysR, substrate-binding RG43_RS17165 8bd02d7e2067704bed00d76c3daa39ec 317 Gene3D G3DSA:3.40.190.10 92 177 1.7E-18 T 09-03-2017 RG43_RS17165 8bd02d7e2067704bed00d76c3daa39ec 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.3E-19 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS04900 6a9474d1a403fb0632e61ac51a8301a8 360 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 214 242 - T 09-03-2017 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 RG43_RS04900 6a9474d1a403fb0632e61ac51a8301a8 360 Hamap MF_01616 Membrane-bound lytic murein transglycosylase C [mltC]. 2 359 66.899 T 09-03-2017 IPR023664 Murein transglycosylase-C GO:0009279|GO:0016798|GO:0016998 RG43_RS04900 6a9474d1a403fb0632e61ac51a8301a8 360 Gene3D G3DSA:1.10.530.10 188 359 3.3E-41 T 09-03-2017 RG43_RS04900 6a9474d1a403fb0632e61ac51a8301a8 360 SUPERFAMILY SSF53955 192 358 1.24E-36 T 09-03-2017 IPR023346 Lysozyme-like domain RG43_RS04900 6a9474d1a403fb0632e61ac51a8301a8 360 Pfam PF01464 Transglycosylase SLT domain 197 320 1.3E-32 T 09-03-2017 IPR008258 Transglycosylase SLT domain 1 RG43_RS04900 6a9474d1a403fb0632e61ac51a8301a8 360 Pfam PF11873 Domain of unknown function (DUF3393) 4 192 1.9E-76 T 09-03-2017 IPR024570 Murein transglycosylase-C, N-terminal RG43_RS14130 8c594a998eee7b31f51598408074e2db 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 204 6.8E-80 T 09-03-2017 IPR006070 YrdC-like domain GO:0003725 RG43_RS14130 8c594a998eee7b31f51598408074e2db 206 Pfam PF01300 Telomere recombination 23 198 2.8E-46 T 09-03-2017 IPR006070 YrdC-like domain GO:0003725 RG43_RS14130 8c594a998eee7b31f51598408074e2db 206 Gene3D G3DSA:3.90.870.10 2 203 3.2E-65 T 09-03-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain RG43_RS14130 8c594a998eee7b31f51598408074e2db 206 SUPERFAMILY SSF55821 1 204 2.66E-66 T 09-03-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain RG43_RS24715 74b0129e2946e1d92aa7830f927af3a8 310 Pfam PF01553 Acyltransferase 84 216 8.2E-14 T 09-03-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RG43_RS24715 74b0129e2946e1d92aa7830f927af3a8 310 SUPERFAMILY SSF69593 19 296 1.83E-25 T 09-03-2017 RG43_RS24715 74b0129e2946e1d92aa7830f927af3a8 310 SMART SM00563 97 224 2.6E-15 T 09-03-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RG43_RS10535 023d57a9464443eca0dad0a60f309129 216 Pfam PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment 37 216 1.7E-84 T 09-03-2017 IPR015304 ZinT domain GO:0008270 RG43_RS10535 023d57a9464443eca0dad0a60f309129 216 Gene3D G3DSA:2.40.128.20 30 216 6.1E-88 T 09-03-2017 IPR012674 Calycin RG43_RS10535 023d57a9464443eca0dad0a60f309129 216 SUPERFAMILY SSF50814 31 216 3.07E-80 T 09-03-2017 IPR011038 Calycin-like RG43_RS22100 61c7f223234642e4fb23093d0a16db6f 326 SUPERFAMILY SSF52266 10 265 7.6E-43 T 09-03-2017 IPR013830 SGNH hydrolase-type esterase domain RG43_RS22100 61c7f223234642e4fb23093d0a16db6f 326 SUPERFAMILY SSF52266 297 323 7.6E-43 T 09-03-2017 IPR013830 SGNH hydrolase-type esterase domain RG43_RS19915 a8b3533ccd3ce18d51a5a16981af2f25 129 PIRSF PIRSF001007 1 125 4.8E-49 T 09-03-2017 IPR016281 Crossover junction endodeoxyribonuclease, RusA GO:0008821 RG43_RS19915 a8b3533ccd3ce18d51a5a16981af2f25 129 Gene3D G3DSA:3.30.1330.70 1 123 1.5E-35 T 09-03-2017 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 RG43_RS19915 a8b3533ccd3ce18d51a5a16981af2f25 129 SUPERFAMILY SSF103084 2 120 9.55E-30 T 09-03-2017 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 RG43_RS19915 a8b3533ccd3ce18d51a5a16981af2f25 129 Pfam PF05866 Endodeoxyribonuclease RusA 6 118 1.5E-17 T 09-03-2017 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 RG43_RS25715 0c3915801912beeeb247d1269137f1eb 404 Pfam PF07676 WD40-like Beta Propeller Repeat 378 392 0.054 T 09-03-2017 IPR011659 WD40-like Beta Propeller RG43_RS25715 0c3915801912beeeb247d1269137f1eb 404 Pfam PF12566 Protein of unknown function (DUF3748) 63 179 4.3E-56 T 09-03-2017 IPR022223 Protein of unknown function DUF3748 RG43_RS25715 0c3915801912beeeb247d1269137f1eb 404 Gene3D G3DSA:2.120.10.30 228 394 1.3E-31 T 09-03-2017 IPR011042 Six-bladed beta-propeller, TolB-like RG43_RS25715 0c3915801912beeeb247d1269137f1eb 404 Gene3D G3DSA:2.120.10.30 15 145 1.3E-31 T 09-03-2017 IPR011042 Six-bladed beta-propeller, TolB-like RG43_RS25715 0c3915801912beeeb247d1269137f1eb 404 SUPERFAMILY SSF69304 269 403 3.14E-21 T 09-03-2017 RG43_RS25715 0c3915801912beeeb247d1269137f1eb 404 SUPERFAMILY SSF69304 18 147 3.14E-21 T 09-03-2017 RG43_RS20450 47574aae43a19573b05ff86f0765038f 304 Gene3D G3DSA:3.40.190.10 180 258 1.1E-19 T 09-03-2017 RG43_RS20450 47574aae43a19573b05ff86f0765038f 304 SUPERFAMILY SSF46785 6 113 7.57E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS20450 47574aae43a19573b05ff86f0765038f 304 Gene3D G3DSA:1.10.10.10 5 84 4.3E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS20450 47574aae43a19573b05ff86f0765038f 304 SUPERFAMILY SSF53850 90 296 5.54E-46 T 09-03-2017 RG43_RS20450 47574aae43a19573b05ff86f0765038f 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 3.7E-20 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS20450 47574aae43a19573b05ff86f0765038f 304 Gene3D G3DSA:3.40.190.10 93 179 1.9E-24 T 09-03-2017 RG43_RS20450 47574aae43a19573b05ff86f0765038f 304 Pfam PF03466 LysR substrate binding domain 89 293 3.0E-44 T 09-03-2017 IPR005119 LysR, substrate-binding RG43_RS20450 47574aae43a19573b05ff86f0765038f 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 4.3E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS20450 47574aae43a19573b05ff86f0765038f 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 4.3E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS20450 47574aae43a19573b05ff86f0765038f 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 4.3E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS16000 2bcb299efdd1709ea651cbb1ce0da9d1 248 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 1.1E-138 T 09-03-2017 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 RG43_RS16000 2bcb299efdd1709ea651cbb1ce0da9d1 248 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 46.701 T 09-03-2017 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 RG43_RS16000 2bcb299efdd1709ea651cbb1ce0da9d1 248 Gene3D G3DSA:3.90.550.10 1 247 2.2E-86 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS16000 2bcb299efdd1709ea651cbb1ce0da9d1 248 SUPERFAMILY SSF53448 3 245 1.01E-67 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS16000 2bcb299efdd1709ea651cbb1ce0da9d1 248 Pfam PF02348 Cytidylyltransferase 4 221 1.6E-73 T 09-03-2017 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 RG43_RS15515 d557ce7742d8da7e065b19668bb53df1 196 SUPERFAMILY SSF55469 12 193 7.72E-40 T 09-03-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 RG43_RS15515 d557ce7742d8da7e065b19668bb53df1 196 Pfam PF00881 Nitroreductase family 18 174 3.2E-14 T 09-03-2017 IPR029479 Nitroreductase Reactome: R-HSA-209968 RG43_RS15515 d557ce7742d8da7e065b19668bb53df1 196 Hamap MF_01204 Probable malonic semialdehyde reductase RutE [rutE]. 2 196 47.001 T 09-03-2017 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE GO:0016491|GO:0055114 RG43_RS15515 d557ce7742d8da7e065b19668bb53df1 196 Gene3D G3DSA:3.40.109.10 7 193 2.1E-41 T 09-03-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 RG43_RS09315 90f9f11246286543a69886ebf82dc26b 262 Gene3D G3DSA:3.40.1190.20 10 260 1.0E-86 T 09-03-2017 IPR029056 Ribokinase-like RG43_RS09315 90f9f11246286543a69886ebf82dc26b 262 Pfam PF02110 Hydroxyethylthiazole kinase family 15 259 6.1E-107 T 09-03-2017 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RG43_RS09315 90f9f11246286543a69886ebf82dc26b 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 36 57 4.6E-43 T 09-03-2017 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RG43_RS09315 90f9f11246286543a69886ebf82dc26b 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 167 184 4.6E-43 T 09-03-2017 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RG43_RS09315 90f9f11246286543a69886ebf82dc26b 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 67 75 4.6E-43 T 09-03-2017 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RG43_RS09315 90f9f11246286543a69886ebf82dc26b 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 123 137 4.6E-43 T 09-03-2017 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RG43_RS09315 90f9f11246286543a69886ebf82dc26b 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 93 110 4.6E-43 T 09-03-2017 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RG43_RS09315 90f9f11246286543a69886ebf82dc26b 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 23 30 4.6E-43 T 09-03-2017 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RG43_RS09315 90f9f11246286543a69886ebf82dc26b 262 SUPERFAMILY SSF53613 13 260 5.89E-61 T 09-03-2017 IPR029056 Ribokinase-like RG43_RS09315 90f9f11246286543a69886ebf82dc26b 262 PIRSF PIRSF000513 9 262 3.1E-106 T 09-03-2017 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RG43_RS09315 90f9f11246286543a69886ebf82dc26b 262 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 17 262 30.224 T 09-03-2017 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RG43_RS09315 90f9f11246286543a69886ebf82dc26b 262 TIGRFAM TIGR00694 thiM: hydroxyethylthiazole kinase 15 261 1.3E-102 T 09-03-2017 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RG43_RS27005 5b8dc3158b82445de612fa7ddabe7975 74 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 18 62 2.1E-9 T 09-03-2017 IPR010260 Prophage CP4-57 regulatory protein (AlpA) RG43_RS04615 5b8dc3158b82445de612fa7ddabe7975 74 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 18 62 2.1E-9 T 09-03-2017 IPR010260 Prophage CP4-57 regulatory protein (AlpA) RG43_RS16280 e551407cd93150870d8803fe6aba0b3c 107 Pfam PF01906 Putative heavy-metal-binding 1 104 1.6E-40 T 09-03-2017 IPR002765 Uncharacterised protein family UPF0145 RG43_RS16280 e551407cd93150870d8803fe6aba0b3c 107 Gene3D G3DSA:3.30.110.70 1 104 3.0E-39 T 09-03-2017 IPR002765 Uncharacterised protein family UPF0145 RG43_RS16280 e551407cd93150870d8803fe6aba0b3c 107 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 105 24.844 T 09-03-2017 IPR002765 Uncharacterised protein family UPF0145 RG43_RS16280 e551407cd93150870d8803fe6aba0b3c 107 SUPERFAMILY SSF117782 1 106 6.02E-39 T 09-03-2017 IPR002765 Uncharacterised protein family UPF0145 RG43_RS03655 92c0aba34a7fce72287d725b3b357fab 204 Pfam PF11726 Protein of unknown function (DUF3296) 18 202 3.2E-57 T 09-03-2017 IPR021723 Inovirus Gp2 RG43_RS20740 5b25e9c5e71178de50fa3ffc30245752 426 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 109.085 T 09-03-2017 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 RG43_RS20740 5b25e9c5e71178de50fa3ffc30245752 426 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 425 2.2E-207 T 09-03-2017 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 RG43_RS20740 5b25e9c5e71178de50fa3ffc30245752 426 SUPERFAMILY SSF53383 2 425 1.55E-138 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS20740 5b25e9c5e71178de50fa3ffc30245752 426 Gene3D G3DSA:3.40.640.10 70 315 2.1E-83 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS20740 5b25e9c5e71178de50fa3ffc30245752 426 Gene3D G3DSA:3.90.1150.10 2 69 2.4E-46 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RG43_RS20740 5b25e9c5e71178de50fa3ffc30245752 426 Gene3D G3DSA:3.90.1150.10 319 425 2.4E-46 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RG43_RS20740 5b25e9c5e71178de50fa3ffc30245752 426 Pfam PF00202 Aminotransferase class-III 32 397 3.6E-79 T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RG43_RS20740 5b25e9c5e71178de50fa3ffc30245752 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RG43_RS12375 7c951448f7fded41b9c7d3fae8b9e2e8 275 Pfam PF00877 NlpC/P60 family 157 267 3.9E-33 T 09-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain RG43_RS12375 7c951448f7fded41b9c7d3fae8b9e2e8 275 SUPERFAMILY SSF54001 137 269 1.28E-41 T 09-03-2017 RG43_RS12375 7c951448f7fded41b9c7d3fae8b9e2e8 275 Gene3D G3DSA:3.90.1720.10 137 270 2.3E-47 T 09-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain RG43_RS20250 0dc5113c1cb8f3b1ded8ecbd82bed34c 200 Gene3D G3DSA:1.10.443.10 14 184 1.7E-25 T 09-03-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RG43_RS20250 0dc5113c1cb8f3b1ded8ecbd82bed34c 200 SUPERFAMILY SSF56349 15 197 1.24E-33 T 09-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RG43_RS20250 0dc5113c1cb8f3b1ded8ecbd82bed34c 200 Pfam PF00589 Phage integrase family 34 184 4.1E-17 T 09-03-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RG43_RS03315 ee2d2e7a80323569820151d9dbb37af8 269 Gene3D G3DSA:1.10.10.10 10 64 5.4E-11 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS03315 ee2d2e7a80323569820151d9dbb37af8 269 Pfam PF08220 DeoR-like helix-turn-helix domain 18 74 6.5E-21 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RG43_RS03315 ee2d2e7a80323569820151d9dbb37af8 269 SUPERFAMILY SSF46785 16 71 9.31E-13 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS03315 ee2d2e7a80323569820151d9dbb37af8 269 ProSitePatterns PS00894 DeoR-type HTH domain signature. 18 52 - T 09-03-2017 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 RG43_RS03315 ee2d2e7a80323569820151d9dbb37af8 269 Pfam PF00455 DeoR C terminal sensor domain 89 247 3.5E-56 T 09-03-2017 IPR014036 DeoR C-terminal sensor domain RG43_RS03315 ee2d2e7a80323569820151d9dbb37af8 269 SMART SM01134 87 248 6.7E-71 T 09-03-2017 RG43_RS03315 ee2d2e7a80323569820151d9dbb37af8 269 SMART SM00420 18 70 9.2E-22 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RG43_RS03315 ee2d2e7a80323569820151d9dbb37af8 269 SUPERFAMILY SSF100950 89 249 8.37E-33 T 09-03-2017 RG43_RS03315 ee2d2e7a80323569820151d9dbb37af8 269 Gene3D G3DSA:3.40.50.1360 90 231 9.6E-17 T 09-03-2017 RG43_RS15970 2745803ecbd89066751fe67a12303b81 1486 Pfam PF16330 MukB hinge domain 645 810 5.3E-74 T 09-03-2017 IPR032520 MukB, hinge domain RG43_RS15970 2745803ecbd89066751fe67a12303b81 1486 SUPERFAMILY SSF52540 22 224 4.04E-23 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS15970 2745803ecbd89066751fe67a12303b81 1486 Pfam PF04310 MukB N-terminal 2 227 6.1E-125 T 09-03-2017 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 RG43_RS15970 2745803ecbd89066751fe67a12303b81 1486 SUPERFAMILY SSF52540 1253 1433 1.52E-6 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS15970 2745803ecbd89066751fe67a12303b81 1486 SUPERFAMILY SSF52540 21 55 1.52E-6 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS15970 2745803ecbd89066751fe67a12303b81 1486 Gene3D G3DSA:3.40.1140.10 1 226 5.4E-51 T 09-03-2017 RG43_RS15970 2745803ecbd89066751fe67a12303b81 1486 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1336 1424 7.4E-15 T 09-03-2017 RG43_RS15970 2745803ecbd89066751fe67a12303b81 1486 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 1 1471 11.403 T 09-03-2017 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 RG43_RS15970 2745803ecbd89066751fe67a12303b81 1486 PIRSF PIRSF005246 1 1486 0.0 T 09-03-2017 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 RG43_RS11125 3677727fb049381a16204e8dbbc3db5e 323 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 12 322 54.931 T 09-03-2017 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 RG43_RS11125 3677727fb049381a16204e8dbbc3db5e 323 Gene3D G3DSA:3.40.50.150 91 312 2.6E-28 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS11125 3677727fb049381a16204e8dbbc3db5e 323 SUPERFAMILY SSF53335 91 323 1.04E-33 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS11125 3677727fb049381a16204e8dbbc3db5e 323 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 8.2E-173 T 09-03-2017 IPR027555 tRNA (mo5U34)-methyltransferase-like RG43_RS11125 3677727fb049381a16204e8dbbc3db5e 323 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 8 321 4.7E-148 T 09-03-2017 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 RG43_RS18780 5da70f6b6a3818d82754c4b53ceef2c6 123 Pfam PF12836 Helix-hairpin-helix motif 60 118 3.6E-19 T 09-03-2017 RG43_RS18780 5da70f6b6a3818d82754c4b53ceef2c6 123 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 55 123 3.2E-38 T 09-03-2017 IPR004509 Competence protein ComEA, helix-hairpin-helix domain RG43_RS18780 5da70f6b6a3818d82754c4b53ceef2c6 123 Gene3D G3DSA:1.10.150.280 42 116 9.0E-17 T 09-03-2017 RG43_RS18780 5da70f6b6a3818d82754c4b53ceef2c6 123 SUPERFAMILY SSF47781 44 119 9.0E-24 T 09-03-2017 IPR010994 RuvA domain 2-like RG43_RS18780 5da70f6b6a3818d82754c4b53ceef2c6 123 SMART SM00278 71 90 80.0 T 09-03-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RG43_RS18780 5da70f6b6a3818d82754c4b53ceef2c6 123 SMART SM00278 101 120 5.6 T 09-03-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RG43_RS20885 b33785388ed7fee27027fd1c6f05e055 256 PIRSF PIRSF006648 11 252 4.4E-22 T 09-03-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RG43_RS20885 b33785388ed7fee27027fd1c6f05e055 256 Pfam PF01061 ABC-2 type transporter 9 218 2.6E-39 T 09-03-2017 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 RG43_RS20885 b33785388ed7fee27027fd1c6f05e055 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 1.9E-7 T 09-03-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RG43_RS20885 b33785388ed7fee27027fd1c6f05e055 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 1.9E-7 T 09-03-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RG43_RS20885 b33785388ed7fee27027fd1c6f05e055 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 139 163 1.9E-7 T 09-03-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RG43_RS20885 b33785388ed7fee27027fd1c6f05e055 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 1.9E-7 T 09-03-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RG43_RS22855 450d855a66b57220e455c3824dd9226b 478 SUPERFAMILY SSF48557 2 458 4.71E-147 T 09-03-2017 IPR008948 L-Aspartase-like GO:0003824 RG43_RS22855 450d855a66b57220e455c3824dd9226b 478 Pfam PF10415 Fumarase C C-terminus 411 464 4.1E-17 T 09-03-2017 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 RG43_RS22855 450d855a66b57220e455c3824dd9226b 478 Gene3D G3DSA:1.10.275.10 4 142 3.0E-57 T 09-03-2017 IPR024083 Fumarase/histidase, N-terminal RG43_RS22855 450d855a66b57220e455c3824dd9226b 478 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 6 474 2.0E-276 T 09-03-2017 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 RG43_RS22855 450d855a66b57220e455c3824dd9226b 478 Gene3D G3DSA:1.10.40.30 411 462 5.9E-19 T 09-03-2017 RG43_RS22855 450d855a66b57220e455c3824dd9226b 478 Gene3D G3DSA:1.20.200.10 143 405 6.8E-91 T 09-03-2017 RG43_RS22855 450d855a66b57220e455c3824dd9226b 478 ProSitePatterns PS00163 Fumarate lyases signature. 320 329 - T 09-03-2017 IPR020557 Fumarate lyase, conserved site GO:0003824 RG43_RS22855 450d855a66b57220e455c3824dd9226b 478 PRINTS PR00145 Argininosuccinate lyase family signature 320 336 1.4E-5 T 09-03-2017 RG43_RS22855 450d855a66b57220e455c3824dd9226b 478 PRINTS PR00145 Argininosuccinate lyase family signature 137 159 1.4E-5 T 09-03-2017 RG43_RS22855 450d855a66b57220e455c3824dd9226b 478 PRINTS PR00145 Argininosuccinate lyase family signature 178 198 1.4E-5 T 09-03-2017 RG43_RS22855 450d855a66b57220e455c3824dd9226b 478 Pfam PF00206 Lyase 13 345 1.3E-117 T 09-03-2017 IPR022761 Fumarate lyase, N-terminal RG43_RS22855 450d855a66b57220e455c3824dd9226b 478 PRINTS PR00149 Fumarate lyase superfamily signature 274 301 4.8E-28 T 09-03-2017 IPR000362 Fumarate lyase family RG43_RS22855 450d855a66b57220e455c3824dd9226b 478 PRINTS PR00149 Fumarate lyase superfamily signature 320 336 4.8E-28 T 09-03-2017 IPR000362 Fumarate lyase family RG43_RS22855 450d855a66b57220e455c3824dd9226b 478 PRINTS PR00149 Fumarate lyase superfamily signature 183 201 4.8E-28 T 09-03-2017 IPR000362 Fumarate lyase family RG43_RS22855 450d855a66b57220e455c3824dd9226b 478 PRINTS PR00149 Fumarate lyase superfamily signature 138 156 4.8E-28 T 09-03-2017 IPR000362 Fumarate lyase family RG43_RS00925 47beff18562307003a618acb0786ca43 113 Pfam PF05360 yiaA/B two helix domain 6 50 3.3E-8 T 09-03-2017 IPR008024 YiaAB two helix RG43_RS02795 91d0535ec00ce932aac0c98e8a6bf9df 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 148 8.6E-23 T 09-03-2017 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 RG43_RS02795 91d0535ec00ce932aac0c98e8a6bf9df 156 SUPERFAMILY SSF46785 3 77 1.81E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS02795 91d0535ec00ce932aac0c98e8a6bf9df 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 1.3E-24 T 09-03-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 RG43_RS02795 91d0535ec00ce932aac0c98e8a6bf9df 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 1.3E-24 T 09-03-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 RG43_RS02795 91d0535ec00ce932aac0c98e8a6bf9df 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 1.3E-24 T 09-03-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 RG43_RS02795 91d0535ec00ce932aac0c98e8a6bf9df 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 1.3E-24 T 09-03-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 RG43_RS02795 91d0535ec00ce932aac0c98e8a6bf9df 156 Gene3D G3DSA:3.30.1360.40 80 154 2.2E-27 T 09-03-2017 IPR024946 Arginine repressor C-terminal-like domain RG43_RS02795 91d0535ec00ce932aac0c98e8a6bf9df 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 9 152 3.2E-49 T 09-03-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 RG43_RS02795 91d0535ec00ce932aac0c98e8a6bf9df 156 Pfam PF01316 Arginine repressor, DNA binding domain 5 74 1.8E-26 T 09-03-2017 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 RG43_RS02795 91d0535ec00ce932aac0c98e8a6bf9df 156 SUPERFAMILY SSF55252 82 151 1.05E-19 T 09-03-2017 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 RG43_RS02795 91d0535ec00ce932aac0c98e8a6bf9df 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 61.063 T 09-03-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 RG43_RS02795 91d0535ec00ce932aac0c98e8a6bf9df 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 153 3.0E-31 T 09-03-2017 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 RG43_RS02795 91d0535ec00ce932aac0c98e8a6bf9df 156 Gene3D G3DSA:1.10.10.10 2 77 1.9E-35 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS24630 4f9093de0f14232786b9f615f5717006 298 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 238 251 - T 09-03-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RG43_RS24630 4f9093de0f14232786b9f615f5717006 298 PRINTS PR00990 Ribokinase signature 33 52 2.7E-6 T 09-03-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 RG43_RS24630 4f9093de0f14232786b9f615f5717006 298 PRINTS PR00990 Ribokinase signature 6 27 2.7E-6 T 09-03-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 RG43_RS24630 4f9093de0f14232786b9f615f5717006 298 PRINTS PR00990 Ribokinase signature 209 220 2.7E-6 T 09-03-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 RG43_RS24630 4f9093de0f14232786b9f615f5717006 298 Gene3D G3DSA:3.40.1190.20 2 295 2.7E-78 T 09-03-2017 IPR029056 Ribokinase-like RG43_RS24630 4f9093de0f14232786b9f615f5717006 298 Pfam PF00294 pfkB family carbohydrate kinase 1 286 3.3E-55 T 09-03-2017 IPR011611 Carbohydrate kinase PfkB RG43_RS24630 4f9093de0f14232786b9f615f5717006 298 SUPERFAMILY SSF53613 1 294 2.18E-65 T 09-03-2017 IPR029056 Ribokinase-like RG43_RS24630 4f9093de0f14232786b9f615f5717006 298 Hamap MF_00999 Sulfofructose kinase. 1 298 60.95 T 09-03-2017 IPR030877 Sulfofructose kinase GO:0061594 MetaCyc: PWY-7446 RG43_RS14730 b3685bc8f335ddaa2a085a006d596231 142 PRINTS PR01484 Pertactin virulence factor family signature 58 79 1.1E-7 T 09-03-2017 IPR003991 Pertactin virulence factor family GO:0007155 RG43_RS14730 b3685bc8f335ddaa2a085a006d596231 142 PRINTS PR01484 Pertactin virulence factor family signature 122 142 1.1E-7 T 09-03-2017 IPR003991 Pertactin virulence factor family GO:0007155 RG43_RS14730 b3685bc8f335ddaa2a085a006d596231 142 PRINTS PR01484 Pertactin virulence factor family signature 29 52 1.1E-7 T 09-03-2017 IPR003991 Pertactin virulence factor family GO:0007155 RG43_RS14730 b3685bc8f335ddaa2a085a006d596231 142 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 29 142 6.8E-22 T 09-03-2017 IPR006315 Outer membrane autotransporter barrel GO:0019867 RG43_RS14730 b3685bc8f335ddaa2a085a006d596231 142 Pfam PF03797 Autotransporter beta-domain 29 126 4.0E-12 T 09-03-2017 IPR005546 Autotransporter beta-domain RG43_RS14730 b3685bc8f335ddaa2a085a006d596231 142 SUPERFAMILY SSF103515 31 142 2.22E-12 T 09-03-2017 IPR005546 Autotransporter beta-domain RG43_RS14730 b3685bc8f335ddaa2a085a006d596231 142 Gene3D G3DSA:2.40.128.130 29 142 3.6E-21 T 09-03-2017 IPR005546 Autotransporter beta-domain RG43_RS00630 05afc641074561bb7c3cff9689e350ff 398 Gene3D G3DSA:3.40.640.10 58 278 2.3E-96 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS00630 05afc641074561bb7c3cff9689e350ff 398 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 5 397 1.4E-225 T 09-03-2017 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 RG43_RS00630 05afc641074561bb7c3cff9689e350ff 398 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 09-03-2017 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 RG43_RS00630 05afc641074561bb7c3cff9689e350ff 398 SUPERFAMILY SSF53383 5 396 2.96E-127 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS00630 05afc641074561bb7c3cff9689e350ff 398 Gene3D G3DSA:3.90.1150.10 279 393 9.9E-36 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RG43_RS00630 05afc641074561bb7c3cff9689e350ff 398 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 395 54.128 T 09-03-2017 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 RG43_RS00630 05afc641074561bb7c3cff9689e350ff 398 Pfam PF00155 Aminotransferase class I and II 43 387 1.1E-79 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RG43_RS00565 f348d2481cd985f0bab2284e1fadcd6f 425 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 33 211 1.8E-67 T 09-03-2017 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 RG43_RS00565 f348d2481cd985f0bab2284e1fadcd6f 425 Pfam PF00534 Glycosyl transferases group 1 239 398 7.7E-12 T 09-03-2017 IPR001296 Glycosyl transferase, family 1 RG43_RS00565 f348d2481cd985f0bab2284e1fadcd6f 425 SUPERFAMILY SSF53756 57 420 1.61E-19 T 09-03-2017 RG43_RS06860 cd93264d8417bdc1ff8553bbf67b7f25 216 PIRSF PIRSF016938 1 205 3.3E-37 T 09-03-2017 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0006950|GO:0016989 RG43_RS06860 cd93264d8417bdc1ff8553bbf67b7f25 216 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 132 186 5.6E-26 T 09-03-2017 IPR005573 Anti sigma-E protein RseA, C-terminal RG43_RS06860 cd93264d8417bdc1ff8553bbf67b7f25 216 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 87 3.6E-37 T 09-03-2017 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 RG43_RS06860 cd93264d8417bdc1ff8553bbf67b7f25 216 SUPERFAMILY SSF89069 1 66 1.44E-22 T 09-03-2017 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 RG43_RS12775 618d3438dc9c2ded2f515b2ccddbb73f 108 SUPERFAMILY SSF103481 8 105 1.01E-5 T 09-03-2017 RG43_RS12775 618d3438dc9c2ded2f515b2ccddbb73f 108 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 2 106 22.351 T 09-03-2017 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 RG43_RS12775 618d3438dc9c2ded2f515b2ccddbb73f 108 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 1 107 9.1E-49 T 09-03-2017 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 RG43_RS26700 6fbac872c96f2fc47988e3f326212763 186 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 184 9.9E-64 T 09-03-2017 IPR006513 Conserved hypothetical protein CHP01626, YtfJ RG43_RS26700 6fbac872c96f2fc47988e3f326212763 186 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 25 182 5.1E-59 T 09-03-2017 IPR006513 Conserved hypothetical protein CHP01626, YtfJ RG43_RS04325 6fbac872c96f2fc47988e3f326212763 186 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 184 9.9E-64 T 09-03-2017 IPR006513 Conserved hypothetical protein CHP01626, YtfJ RG43_RS04325 6fbac872c96f2fc47988e3f326212763 186 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 25 182 5.1E-59 T 09-03-2017 IPR006513 Conserved hypothetical protein CHP01626, YtfJ RG43_RS23220 77f3356e9cf526528500335833273ead 437 Pfam PF00375 Sodium:dicarboxylate symporter family 8 411 4.4E-116 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RG43_RS23220 77f3356e9cf526528500335833273ead 437 Gene3D G3DSA:1.10.3860.10 3 416 1.9E-128 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RG43_RS23220 77f3356e9cf526528500335833273ead 437 SUPERFAMILY SSF118215 8 412 3.53E-121 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RG43_RS23220 77f3356e9cf526528500335833273ead 437 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 43 58 - T 09-03-2017 IPR018107 Sodium:dicarboxylate symporter, conserved site RG43_RS23220 77f3356e9cf526528500335833273ead 437 PRINTS PR00173 Glutamate-aspartate symporter signature 6 26 3.5E-52 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RG43_RS23220 77f3356e9cf526528500335833273ead 437 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 3.5E-52 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RG43_RS23220 77f3356e9cf526528500335833273ead 437 PRINTS PR00173 Glutamate-aspartate symporter signature 365 385 3.5E-52 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RG43_RS23220 77f3356e9cf526528500335833273ead 437 PRINTS PR00173 Glutamate-aspartate symporter signature 203 222 3.5E-52 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RG43_RS23220 77f3356e9cf526528500335833273ead 437 PRINTS PR00173 Glutamate-aspartate symporter signature 303 329 3.5E-52 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RG43_RS23220 77f3356e9cf526528500335833273ead 437 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 3.5E-52 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RG43_RS23220 77f3356e9cf526528500335833273ead 437 PRINTS PR00173 Glutamate-aspartate symporter signature 155 177 3.5E-52 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RG43_RS23220 77f3356e9cf526528500335833273ead 437 PRINTS PR00173 Glutamate-aspartate symporter signature 338 357 3.5E-52 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RG43_RS23220 77f3356e9cf526528500335833273ead 437 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 306 329 - T 09-03-2017 IPR018107 Sodium:dicarboxylate symporter, conserved site RG43_RS05350 e5c9dc9107df7d5e70384862c1e54293 639 SUPERFAMILY SSF51971 311 565 2.65E-64 T 09-03-2017 RG43_RS05350 e5c9dc9107df7d5e70384862c1e54293 639 PRINTS PR00419 Adrenodoxin reductase family signature 454 468 8.2E-36 T 09-03-2017 RG43_RS05350 e5c9dc9107df7d5e70384862c1e54293 639 PRINTS PR00419 Adrenodoxin reductase family signature 488 501 8.2E-36 T 09-03-2017 RG43_RS05350 e5c9dc9107df7d5e70384862c1e54293 639 PRINTS PR00419 Adrenodoxin reductase family signature 377 387 8.2E-36 T 09-03-2017 RG43_RS05350 e5c9dc9107df7d5e70384862c1e54293 639 PRINTS PR00419 Adrenodoxin reductase family signature 312 334 8.2E-36 T 09-03-2017 RG43_RS05350 e5c9dc9107df7d5e70384862c1e54293 639 PRINTS PR00419 Adrenodoxin reductase family signature 335 348 8.2E-36 T 09-03-2017 RG43_RS05350 e5c9dc9107df7d5e70384862c1e54293 639 Gene3D G3DSA:3.30.70.20 61 92 1.8E-13 T 09-03-2017 RG43_RS05350 e5c9dc9107df7d5e70384862c1e54293 639 Gene3D G3DSA:1.10.1060.10 173 312 5.3E-42 T 09-03-2017 RG43_RS05350 e5c9dc9107df7d5e70384862c1e54293 639 Gene3D G3DSA:3.50.50.60 313 409 2.8E-30 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS05350 e5c9dc9107df7d5e70384862c1e54293 639 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 312 623 3.0E-21 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS05350 e5c9dc9107df7d5e70384862c1e54293 639 Pfam PF13247 4Fe-4S dicluster domain 53 136 3.4E-11 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS05350 e5c9dc9107df7d5e70384862c1e54293 639 Gene3D G3DSA:3.30.70.20 4 60 8.2E-14 T 09-03-2017 RG43_RS05350 e5c9dc9107df7d5e70384862c1e54293 639 Gene3D G3DSA:3.30.70.20 125 146 8.2E-14 T 09-03-2017 RG43_RS05350 e5c9dc9107df7d5e70384862c1e54293 639 Gene3D G3DSA:3.30.70.20 93 124 1.0E-10 T 09-03-2017 RG43_RS05350 e5c9dc9107df7d5e70384862c1e54293 639 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 171 635 2.2E-256 T 09-03-2017 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 RG43_RS05350 e5c9dc9107df7d5e70384862c1e54293 639 SUPERFAMILY SSF54862 180 274 3.35E-42 T 09-03-2017 RG43_RS05350 e5c9dc9107df7d5e70384862c1e54293 639 SUPERFAMILY SSF54862 1 153 3.35E-42 T 09-03-2017 RG43_RS05350 e5c9dc9107df7d5e70384862c1e54293 639 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 187 298 9.1E-37 T 09-03-2017 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 RG43_RS05350 e5c9dc9107df7d5e70384862c1e54293 639 Gene3D G3DSA:3.50.50.60 558 631 1.0E-7 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS05350 e5c9dc9107df7d5e70384862c1e54293 639 Gene3D G3DSA:3.50.50.60 410 557 4.1E-44 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS05350 e5c9dc9107df7d5e70384862c1e54293 639 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 87 98 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS21965 2eb8021ddcd0b1eb449cefc11b718cb4 392 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 23 380 2.2E-134 T 09-03-2017 IPR010645 Uncharacterised MFS-type transporter YbfB RG43_RS21965 2eb8021ddcd0b1eb449cefc11b718cb4 392 Gene3D G3DSA:1.20.1250.20 17 196 3.3E-8 T 09-03-2017 RG43_RS21965 2eb8021ddcd0b1eb449cefc11b718cb4 392 Gene3D G3DSA:1.20.1250.20 212 380 7.4E-15 T 09-03-2017 RG43_RS21965 2eb8021ddcd0b1eb449cefc11b718cb4 392 SUPERFAMILY SSF103473 12 381 7.32E-29 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS06350 a2d189749af6d11797f208916dc8dacd 119 PIRSF PIRSF011474 1 119 1.3E-47 T 09-03-2017 IPR009693 Glucitol operon activator RG43_RS06350 a2d189749af6d11797f208916dc8dacd 119 Pfam PF06923 Glucitol operon activator protein (GutM) 5 110 9.7E-36 T 09-03-2017 IPR009693 Glucitol operon activator RG43_RS22580 3b4e3f7b6ce93f81e78a0431fb3ddf66 95 Gene3D G3DSA:3.30.1660.10 37 94 2.7E-15 T 09-03-2017 IPR025543 Dodecin-like RG43_RS22580 3b4e3f7b6ce93f81e78a0431fb3ddf66 95 Pfam PF07338 Protein of unknown function (DUF1471) 39 94 2.0E-18 T 09-03-2017 IPR010854 Domain of unknown function DUF1471 RG43_RS22580 3b4e3f7b6ce93f81e78a0431fb3ddf66 95 SUPERFAMILY SSF159871 15 94 1.57E-18 T 09-03-2017 IPR010854 Domain of unknown function DUF1471 RG43_RS15030 c50c57cf86316732c17b83b39625f8a9 334 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 13 201 2.2E-59 T 09-03-2017 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS15030 c50c57cf86316732c17b83b39625f8a9 334 SUPERFAMILY SSF52540 1 207 1.83E-49 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS15030 c50c57cf86316732c17b83b39625f8a9 334 SUPERFAMILY SSF48019 208 328 7.31E-38 T 09-03-2017 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 RG43_RS15030 c50c57cf86316732c17b83b39625f8a9 334 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 210 320 2.5E-36 T 09-03-2017 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS15030 c50c57cf86316732c17b83b39625f8a9 334 Gene3D G3DSA:1.20.272.10 210 328 1.4E-47 T 09-03-2017 RG43_RS15030 c50c57cf86316732c17b83b39625f8a9 334 Gene3D G3DSA:3.40.50.300 9 166 2.4E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS15030 c50c57cf86316732c17b83b39625f8a9 334 Pfam PF13177 DNA polymerase III, delta subunit 12 164 1.2E-40 T 09-03-2017 RG43_RS15030 c50c57cf86316732c17b83b39625f8a9 334 Gene3D G3DSA:1.10.8.10 168 207 4.4E-27 T 09-03-2017 RG43_RS19555 f667fc43a313e49b66380b5110c66bb0 294 Gene3D G3DSA:3.20.20.100 10 272 4.3E-90 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain RG43_RS19555 f667fc43a313e49b66380b5110c66bb0 294 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 236 251 - T 09-03-2017 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 RG43_RS19555 f667fc43a313e49b66380b5110c66bb0 294 PRINTS PR00069 Aldo-keto reductase signature 101 119 7.0E-39 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RG43_RS19555 f667fc43a313e49b66380b5110c66bb0 294 PRINTS PR00069 Aldo-keto reductase signature 130 147 7.0E-39 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RG43_RS19555 f667fc43a313e49b66380b5110c66bb0 294 PRINTS PR00069 Aldo-keto reductase signature 40 64 7.0E-39 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RG43_RS19555 f667fc43a313e49b66380b5110c66bb0 294 PRINTS PR00069 Aldo-keto reductase signature 164 193 7.0E-39 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RG43_RS19555 f667fc43a313e49b66380b5110c66bb0 294 PRINTS PR00069 Aldo-keto reductase signature 203 227 7.0E-39 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RG43_RS19555 f667fc43a313e49b66380b5110c66bb0 294 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 44 61 - T 09-03-2017 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 RG43_RS19555 f667fc43a313e49b66380b5110c66bb0 294 SUPERFAMILY SSF51430 10 270 4.85E-81 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain RG43_RS19555 f667fc43a313e49b66380b5110c66bb0 294 Pfam PF00248 Aldo/keto reductase family 21 267 5.1E-40 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain RG43_RS11720 2da1b3dbc2fdda86bf9b48e45087b1d6 167 SUPERFAMILY SSF55826 10 163 1.96E-35 T 09-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RG43_RS11720 2da1b3dbc2fdda86bf9b48e45087b1d6 167 Pfam PF04073 Aminoacyl-tRNA editing domain 30 154 1.7E-25 T 09-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RG43_RS11720 2da1b3dbc2fdda86bf9b48e45087b1d6 167 Gene3D G3DSA:3.90.960.10 7 161 1.5E-33 T 09-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RG43_RS01575 37921dab3e2edc0b45927b528e3c125e 222 SMART SM00382 27 214 2.6E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS01575 37921dab3e2edc0b45927b528e3c125e 222 Pfam PF00005 ABC transporter 18 165 1.6E-37 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS01575 37921dab3e2edc0b45927b528e3c125e 222 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 213 6.3E-94 T 09-03-2017 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 RG43_RS01575 37921dab3e2edc0b45927b528e3c125e 222 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS01575 37921dab3e2edc0b45927b528e3c125e 222 SUPERFAMILY SSF52540 1 216 1.86E-67 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS01575 37921dab3e2edc0b45927b528e3c125e 222 Gene3D G3DSA:3.40.50.300 1 215 8.9E-69 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS20350 a24bd9888f0b99ef845900c74e812a94 125 Pfam PF06755 CbtA_toxin of type IV toxin-antitoxin system 1 112 5.1E-61 T 09-03-2017 IPR009610 CbtA toxin of type IV toxin-antitoxin system RG43_RS00375 f2ff180b8d67333d9022796fd622c9b0 170 Pfam PF03400 IS1 transposase 40 170 1.3E-77 T 09-03-2017 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 RG43_RS11510 2438b21594d2be1ec72263acfe9ba76f 69 SMART SM00357 5 69 9.3E-31 T 09-03-2017 IPR011129 Cold shock protein GO:0003676 RG43_RS11510 2438b21594d2be1ec72263acfe9ba76f 69 PIRSF PIRSF002599 1 69 7.1E-26 T 09-03-2017 IPR012156 Cold shock, CspA GO:0003676 RG43_RS11510 2438b21594d2be1ec72263acfe9ba76f 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 2.9E-33 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RG43_RS11510 2438b21594d2be1ec72263acfe9ba76f 69 Gene3D G3DSA:2.40.50.140 4 67 2.7E-32 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS11510 2438b21594d2be1ec72263acfe9ba76f 69 SUPERFAMILY SSF50249 3 68 3.26E-26 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS11510 2438b21594d2be1ec72263acfe9ba76f 69 PRINTS PR00050 Cold shock protein signature 42 60 1.1E-18 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RG43_RS11510 2438b21594d2be1ec72263acfe9ba76f 69 PRINTS PR00050 Cold shock protein signature 27 36 1.1E-18 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RG43_RS11510 2438b21594d2be1ec72263acfe9ba76f 69 PRINTS PR00050 Cold shock protein signature 6 21 1.1E-18 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RG43_RS11510 2438b21594d2be1ec72263acfe9ba76f 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 09-03-2017 IPR019844 Cold-shock conserved site RG43_RS04830 daa621620d269f9021e164b3f7060e7f 179 Pfam PF00419 Fimbrial protein 36 178 1.3E-14 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS04830 daa621620d269f9021e164b3f7060e7f 179 PRINTS PR01555 Escherichia coli P pili tip fibrillum papE protein signature 70 86 2.1E-49 T 09-03-2017 IPR004086 P pili tip fibrillum PapE protein, Escherichia coli GO:0007155|GO:0009289 RG43_RS04830 daa621620d269f9021e164b3f7060e7f 179 PRINTS PR01555 Escherichia coli P pili tip fibrillum papE protein signature 25 40 2.1E-49 T 09-03-2017 IPR004086 P pili tip fibrillum PapE protein, Escherichia coli GO:0007155|GO:0009289 RG43_RS04830 daa621620d269f9021e164b3f7060e7f 179 PRINTS PR01555 Escherichia coli P pili tip fibrillum papE protein signature 104 120 2.1E-49 T 09-03-2017 IPR004086 P pili tip fibrillum PapE protein, Escherichia coli GO:0007155|GO:0009289 RG43_RS04830 daa621620d269f9021e164b3f7060e7f 179 PRINTS PR01555 Escherichia coli P pili tip fibrillum papE protein signature 131 146 2.1E-49 T 09-03-2017 IPR004086 P pili tip fibrillum PapE protein, Escherichia coli GO:0007155|GO:0009289 RG43_RS04830 daa621620d269f9021e164b3f7060e7f 179 PRINTS PR01555 Escherichia coli P pili tip fibrillum papE protein signature 149 168 2.1E-49 T 09-03-2017 IPR004086 P pili tip fibrillum PapE protein, Escherichia coli GO:0007155|GO:0009289 RG43_RS04830 daa621620d269f9021e164b3f7060e7f 179 Gene3D G3DSA:2.60.40.1090 42 179 4.2E-82 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS04830 daa621620d269f9021e164b3f7060e7f 179 SUPERFAMILY SSF49401 42 178 3.38E-29 T 09-03-2017 IPR008966 Adhesion domain RG43_RS11985 f11f1c5addf6fff4a3cda70723959ef2 196 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 161 2.9E-34 T 09-03-2017 IPR007404 LexA-binding, inner membrane-associated putative hydrolase RG43_RS11985 f11f1c5addf6fff4a3cda70723959ef2 196 PIRSF PIRSF030780 1 195 1.6E-126 T 09-03-2017 IPR016956 Inner membrane protein YdjM RG43_RS19260 739fdcff124b7039c8cb075eb10a0960 315 Pfam PF09339 IclR helix-turn-helix domain 53 103 1.1E-14 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RG43_RS19260 739fdcff124b7039c8cb075eb10a0960 315 Gene3D G3DSA:1.10.10.10 43 118 4.5E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS19260 739fdcff124b7039c8cb075eb10a0960 315 Pfam PF01614 Bacterial transcriptional regulator 173 295 1.7E-12 T 09-03-2017 IPR014757 Transcription regulator IclR, C-terminal RG43_RS19260 739fdcff124b7039c8cb075eb10a0960 315 SUPERFAMILY SSF46785 51 121 8.69E-13 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS19260 739fdcff124b7039c8cb075eb10a0960 315 SMART SM00346 50 140 5.1E-31 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RG43_RS19260 739fdcff124b7039c8cb075eb10a0960 315 Gene3D G3DSA:3.30.450.40 119 292 4.2E-28 T 09-03-2017 IPR029016 GAF domain-like RG43_RS19260 739fdcff124b7039c8cb075eb10a0960 315 SUPERFAMILY SSF55781 123 295 3.06E-26 T 09-03-2017 IPR029016 GAF domain-like RG43_RS00950 5e2bdc78e7347c8f9c4723a665d4d52a 689 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 551 9.0E-216 T 09-03-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RG43_RS00950 5e2bdc78e7347c8f9c4723a665d4d52a 689 Pfam PF05746 DALR anticodon binding domain 582 679 2.9E-8 T 09-03-2017 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 RG43_RS00950 5e2bdc78e7347c8f9c4723a665d4d52a 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 318 334 7.1E-37 T 09-03-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RG43_RS00950 5e2bdc78e7347c8f9c4723a665d4d52a 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 394 413 7.1E-37 T 09-03-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RG43_RS00950 5e2bdc78e7347c8f9c4723a665d4d52a 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 7.1E-37 T 09-03-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RG43_RS00950 5e2bdc78e7347c8f9c4723a665d4d52a 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 246 261 7.1E-37 T 09-03-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RG43_RS00950 5e2bdc78e7347c8f9c4723a665d4d52a 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 7.1E-37 T 09-03-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RG43_RS00950 5e2bdc78e7347c8f9c4723a665d4d52a 689 SUPERFAMILY SSF109604 339 511 5.13E-17 T 09-03-2017 RG43_RS00950 5e2bdc78e7347c8f9c4723a665d4d52a 689 Gene3D G3DSA:1.10.730.10 582 678 1.4E-4 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS00950 5e2bdc78e7347c8f9c4723a665d4d52a 689 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 688 27.287 T 09-03-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RG43_RS00950 5e2bdc78e7347c8f9c4723a665d4d52a 689 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 689 0.0 T 09-03-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RG43_RS05610 4caf626a69b9c6b322dfd8c68ea2947c 1180 Gene3D G3DSA:3.40.50.300 450 580 2.6E-72 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS05610 4caf626a69b9c6b322dfd8c68ea2947c 1180 Gene3D G3DSA:3.40.50.300 729 883 2.6E-72 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS05610 4caf626a69b9c6b322dfd8c68ea2947c 1180 Gene3D G3DSA:1.10.486.10 583 728 4.0E-58 T 09-03-2017 RG43_RS05610 4caf626a69b9c6b322dfd8c68ea2947c 1180 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 6 1173 23.223 T 09-03-2017 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 RG43_RS05610 4caf626a69b9c6b322dfd8c68ea2947c 1180 SUPERFAMILY SSF52540 325 825 2.42E-108 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS05610 4caf626a69b9c6b322dfd8c68ea2947c 1180 SUPERFAMILY SSF52540 14 80 2.42E-108 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS05610 4caf626a69b9c6b322dfd8c68ea2947c 1180 SUPERFAMILY SSF52540 118 202 2.42E-108 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS05610 4caf626a69b9c6b322dfd8c68ea2947c 1180 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 8 1172 0.0 T 09-03-2017 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 RG43_RS05610 4caf626a69b9c6b322dfd8c68ea2947c 1180 SUPERFAMILY SSF52980 899 1174 6.97E-95 T 09-03-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 RG43_RS05610 4caf626a69b9c6b322dfd8c68ea2947c 1180 Pfam PF13361 UvrD-like helicase C-terminal domain 442 808 1.4E-16 T 09-03-2017 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RG43_RS05610 4caf626a69b9c6b322dfd8c68ea2947c 1180 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 437 2.3E-70 T 09-03-2017 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RG43_RS05610 4caf626a69b9c6b322dfd8c68ea2947c 1180 Gene3D G3DSA:3.40.50.300 351 449 6.9E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS05610 4caf626a69b9c6b322dfd8c68ea2947c 1180 Gene3D G3DSA:3.40.50.300 14 82 6.9E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS05610 4caf626a69b9c6b322dfd8c68ea2947c 1180 Gene3D G3DSA:3.40.50.300 120 150 6.9E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS05610 4caf626a69b9c6b322dfd8c68ea2947c 1180 Gene3D G3DSA:3.90.320.10 890 1175 5.5E-108 T 09-03-2017 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 RG43_RS05610 4caf626a69b9c6b322dfd8c68ea2947c 1180 Pfam PF12705 PD-(D/E)XK nuclease superfamily 951 1150 1.9E-5 T 09-03-2017 RG43_RS05610 4caf626a69b9c6b322dfd8c68ea2947c 1180 Gene3D G3DSA:1.10.3170.10 155 349 2.3E-72 T 09-03-2017 RG43_RS18570 8a2b4bb6dbe2f189ffe24ca609283c1b 159 Gene3D G3DSA:3.90.960.10 1 157 2.8E-62 T 09-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RG43_RS18570 8a2b4bb6dbe2f189ffe24ca609283c1b 159 Pfam PF04073 Aminoacyl-tRNA editing domain 31 146 2.7E-23 T 09-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RG43_RS18570 8a2b4bb6dbe2f189ffe24ca609283c1b 159 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 1.1E-57 T 09-03-2017 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC RG43_RS18570 8a2b4bb6dbe2f189ffe24ca609283c1b 159 SUPERFAMILY SSF55826 2 155 1.23E-45 T 09-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RG43_RS18570 8a2b4bb6dbe2f189ffe24ca609283c1b 159 PIRSF PIRSF006181 1 159 2.5E-60 T 09-03-2017 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC RG43_RS10650 d68c42b53ab4eec80490bf186e32e58b 251 Gene3D G3DSA:3.30.70.270 87 249 2.9E-51 T 09-03-2017 RG43_RS10650 d68c42b53ab4eec80490bf186e32e58b 251 SMART SM00267 74 248 1.5E-65 T 09-03-2017 IPR000160 GGDEF domain RG43_RS10650 d68c42b53ab4eec80490bf186e32e58b 251 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 81 248 6.0E-64 T 09-03-2017 IPR000160 GGDEF domain RG43_RS10650 d68c42b53ab4eec80490bf186e32e58b 251 Pfam PF00990 Diguanylate cyclase, GGDEF domain 85 244 6.7E-47 T 09-03-2017 IPR000160 GGDEF domain RG43_RS10650 d68c42b53ab4eec80490bf186e32e58b 251 SUPERFAMILY SSF55073 90 247 3.14E-44 T 09-03-2017 IPR029787 Nucleotide cyclase RG43_RS25420 c1abf373c88e33708a9b31a996cc49be 147 Pfam PF00258 Flavodoxin 7 138 2.7E-23 T 09-03-2017 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 RG43_RS25420 c1abf373c88e33708a9b31a996cc49be 147 SUPERFAMILY SSF52218 1 146 3.62E-38 T 09-03-2017 IPR029039 Flavoprotein-like domain RG43_RS25420 c1abf373c88e33708a9b31a996cc49be 147 Gene3D G3DSA:3.40.50.360 1 146 2.7E-34 T 09-03-2017 IPR029039 Flavoprotein-like domain RG43_RS26140 d7ea885dd4ffd56b9f41e0f907294dd2 272 Pfam PF06067 Domain of unknown function (DUF932) 36 261 6.0E-54 T 09-03-2017 IPR026325 Protein of unknown function DUF932 RG43_RS03765 d7ea885dd4ffd56b9f41e0f907294dd2 272 Pfam PF06067 Domain of unknown function (DUF932) 36 261 6.0E-54 T 09-03-2017 IPR026325 Protein of unknown function DUF932 RG43_RS11765 acca6325d1d2cdeab1f6106e3f4038c3 137 Pfam PF01641 SelR domain 9 127 1.2E-54 T 09-03-2017 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 RG43_RS11765 acca6325d1d2cdeab1f6106e3f4038c3 137 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 3 129 38.685 T 09-03-2017 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 RG43_RS11765 acca6325d1d2cdeab1f6106e3f4038c3 137 SUPERFAMILY SSF51316 5 133 1.99E-59 T 09-03-2017 IPR011057 Mss4-like RG43_RS11765 acca6325d1d2cdeab1f6106e3f4038c3 137 Gene3D G3DSA:2.170.150.20 4 133 9.5E-62 T 09-03-2017 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 RG43_RS11765 acca6325d1d2cdeab1f6106e3f4038c3 137 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 4 136 3.3E-68 T 09-03-2017 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 RG43_RS25395 d2a5c597801cc04789011b9181b89e70 622 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 5 622 33.358 T 09-03-2017 IPR023051 Potassium uptake protein, low affinity, Kup RG43_RS25395 d2a5c597801cc04789011b9181b89e70 622 TIGRFAM TIGR00794 kup: potassium uptake protein 97 550 8.3E-202 T 09-03-2017 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 RG43_RS25395 d2a5c597801cc04789011b9181b89e70 622 Pfam PF02705 K+ potassium transporter 14 544 8.6E-206 T 09-03-2017 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 RG43_RS25730 2268f4daf4bf7885738375c940773157 142 Pfam PF00011 Hsp20/alpha crystallin family 39 135 4.9E-21 T 09-03-2017 IPR002068 Alpha crystallin/Hsp20 domain RG43_RS25730 2268f4daf4bf7885738375c940773157 142 SUPERFAMILY SSF49764 30 134 4.19E-18 T 09-03-2017 IPR008978 HSP20-like chaperone RG43_RS25730 2268f4daf4bf7885738375c940773157 142 Gene3D G3DSA:2.60.40.790 9 134 3.3E-15 T 09-03-2017 IPR008978 HSP20-like chaperone RG43_RS25730 2268f4daf4bf7885738375c940773157 142 Hamap MF_02001 Small heat shock protein IbpB [ibpB]. 1 142 47.247 T 09-03-2017 IPR022848 Small heat shock protein IbpB RG43_RS26230 b9f58c8e73f48c10bddd1dac4690d710 201 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 12 176 2.1E-77 T 09-03-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 RG43_RS26230 b9f58c8e73f48c10bddd1dac4690d710 201 Pfam PF05683 Fumarase C-terminus 9 175 7.5E-40 T 09-03-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 RG43_RS26230 b9f58c8e73f48c10bddd1dac4690d710 201 Gene3D G3DSA:3.20.130.10 1 174 7.1E-68 T 09-03-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 RG43_RS26230 b9f58c8e73f48c10bddd1dac4690d710 201 SUPERFAMILY SSF117457 3 174 1.57E-57 T 09-03-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 RG43_RS03855 b9f58c8e73f48c10bddd1dac4690d710 201 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 12 176 2.1E-77 T 09-03-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 RG43_RS03855 b9f58c8e73f48c10bddd1dac4690d710 201 Pfam PF05683 Fumarase C-terminus 9 175 7.5E-40 T 09-03-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 RG43_RS03855 b9f58c8e73f48c10bddd1dac4690d710 201 Gene3D G3DSA:3.20.130.10 1 174 7.1E-68 T 09-03-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 RG43_RS03855 b9f58c8e73f48c10bddd1dac4690d710 201 SUPERFAMILY SSF117457 3 174 1.57E-57 T 09-03-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 RG43_RS03800 e0b32f7f096f0cdc0ca9c5cf00b9bbee 65 Pfam PF06117 Enterobacterial protein of unknown function (DUF957) 4 65 1.1E-38 T 09-03-2017 IPR009301 Protein of unknown function DUF957 RG43_RS26175 e0b32f7f096f0cdc0ca9c5cf00b9bbee 65 Pfam PF06117 Enterobacterial protein of unknown function (DUF957) 4 65 1.1E-38 T 09-03-2017 IPR009301 Protein of unknown function DUF957 RG43_RS25180 3c862f3c6f80aecbb916669a2ca09aee 416 Pfam PF01943 Polysaccharide biosynthesis protein 4 283 1.5E-8 T 09-03-2017 IPR002797 Polysaccharide biosynthesis protein GO:0016020 RG43_RS25180 3c862f3c6f80aecbb916669a2ca09aee 416 Hamap MF_02024 Lipid III flippase [wzxE]. 1 416 40.007 T 09-03-2017 IPR032896 Lipid III flippase WzxE GO:0005886|GO:0009246 RG43_RS25695 ae7ffe266000edd6949fb93b76b271dd 205 Pfam PF01081 KDPG and KHG aldolase 5 183 1.5E-28 T 09-03-2017 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 RG43_RS25695 ae7ffe266000edd6949fb93b76b271dd 205 Gene3D G3DSA:3.20.20.70 2 202 1.3E-68 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS25695 ae7ffe266000edd6949fb93b76b271dd 205 SUPERFAMILY SSF51569 2 204 2.2E-57 T 09-03-2017 RG43_RS05150 a8ef2580fbba5dc084c0e29260d0cdb6 246 Pfam PF04402 Protein of unknown function (DUF541) 30 230 1.2E-44 T 09-03-2017 IPR007497 Protein of unknown function DUF541 RG43_RS05725 c406273583c8b28f5dfc8e9e4e1d52c6 550 PRINTS PR01021 OMPA domain signature 483 499 5.5E-6 T 09-03-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RG43_RS05725 c406273583c8b28f5dfc8e9e4e1d52c6 550 PRINTS PR01021 OMPA domain signature 468 483 5.5E-6 T 09-03-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RG43_RS05725 c406273583c8b28f5dfc8e9e4e1d52c6 550 Gene3D G3DSA:3.30.1330.60 415 539 3.9E-33 T 09-03-2017 IPR006665 OmpA-like domain RG43_RS05725 c406273583c8b28f5dfc8e9e4e1d52c6 550 Pfam PF00691 OmpA family 437 533 3.6E-17 T 09-03-2017 IPR006665 OmpA-like domain RG43_RS05725 c406273583c8b28f5dfc8e9e4e1d52c6 550 SUPERFAMILY SSF103088 411 538 3.66E-31 T 09-03-2017 IPR006665 OmpA-like domain RG43_RS18885 0f0feee8b183ef8c8fdd4ac0df27ae16 80 Gene3D G3DSA:1.10.287.1040 6 78 8.8E-31 T 09-03-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RG43_RS18885 0f0feee8b183ef8c8fdd4ac0df27ae16 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 50 1.0E-21 T 09-03-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RG43_RS18885 0f0feee8b183ef8c8fdd4ac0df27ae16 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 17.147 T 09-03-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RG43_RS18885 0f0feee8b183ef8c8fdd4ac0df27ae16 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 65 1.2E-24 T 09-03-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RG43_RS18885 0f0feee8b183ef8c8fdd4ac0df27ae16 80 Pfam PF02609 Exonuclease VII small subunit 11 62 6.4E-22 T 09-03-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RG43_RS18885 0f0feee8b183ef8c8fdd4ac0df27ae16 80 PIRSF PIRSF006488 1 80 8.9E-25 T 09-03-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RG43_RS18885 0f0feee8b183ef8c8fdd4ac0df27ae16 80 SUPERFAMILY SSF116842 3 73 4.45E-23 T 09-03-2017 RG43_RS16860 ad12d6288539890c87881f568facea2f 232 TIGRFAM TIGR01600 phage_tail_L: phage minor tail protein L 12 230 8.2E-100 T 09-03-2017 IPR006487 Bacteriophage lambda, GpL, minor tail RG43_RS16860 ad12d6288539890c87881f568facea2f 232 Pfam PF05100 Phage minor tail protein L 29 230 2.3E-99 T 09-03-2017 IPR006487 Bacteriophage lambda, GpL, minor tail RG43_RS23545 eec069c51be85804d98e73059109bae1 315 Pfam PF13936 Helix-turn-helix domain 12 45 1.6E-8 T 09-03-2017 IPR025246 Transposase IS30-like HTH domain RG43_RS23545 eec069c51be85804d98e73059109bae1 315 SUPERFAMILY SSF46689 7 53 2.87E-5 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS23545 eec069c51be85804d98e73059109bae1 315 Gene3D G3DSA:1.10.10.10 13 47 2.1E-6 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS23545 eec069c51be85804d98e73059109bae1 315 Pfam PF04198 Putative sugar-binding domain 59 315 5.4E-76 T 09-03-2017 IPR007324 Sugar-binding domain, putative GO:0030246 RG43_RS23545 eec069c51be85804d98e73059109bae1 315 Gene3D G3DSA:3.40.50.1360 55 315 6.3E-75 T 09-03-2017 RG43_RS23545 eec069c51be85804d98e73059109bae1 315 SUPERFAMILY SSF100950 62 315 1.09E-63 T 09-03-2017 RG43_RS06045 143913688cf813e5d4133576ee149c90 885 SMART SM00487 268 511 0.005 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain RG43_RS06045 143913688cf813e5d4133576ee149c90 885 Gene3D G3DSA:3.40.50.300 269 473 9.9E-9 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS06045 143913688cf813e5d4133576ee149c90 885 TIGRFAM TIGR01596 cas3_HD: CRISPR-associated endonuclease Cas3-HD 24 219 5.8E-25 T 09-03-2017 IPR006483 CRISPR-associated Cas3-HD domain RG43_RS06045 143913688cf813e5d4133576ee149c90 885 Gene3D G3DSA:3.40.50.300 474 489 5.0E-5 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS06045 143913688cf813e5d4133576ee149c90 885 Gene3D G3DSA:3.40.50.300 615 657 5.0E-5 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS06045 143913688cf813e5d4133576ee149c90 885 SUPERFAMILY SSF52540 521 660 7.71E-23 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS06045 143913688cf813e5d4133576ee149c90 885 SUPERFAMILY SSF52540 385 478 7.71E-23 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS06045 143913688cf813e5d4133576ee149c90 885 SUPERFAMILY SSF52540 288 340 7.71E-23 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS06045 143913688cf813e5d4133576ee149c90 885 TIGRFAM TIGR01587 cas3_core: CRISPR-associated helicase Cas3 292 662 1.4E-63 T 09-03-2017 IPR006474 Helicase Cas3, CRISPR-associated, core RG43_RS25315 e4498100732f0ecfbdd3785ff1cf2341 279 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.4E-20 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS25315 e4498100732f0ecfbdd3785ff1cf2341 279 SUPERFAMILY SSF46785 2 85 1.62E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS25315 e4498100732f0ecfbdd3785ff1cf2341 279 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.2E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS25315 e4498100732f0ecfbdd3785ff1cf2341 279 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.2E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS25315 e4498100732f0ecfbdd3785ff1cf2341 279 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.2E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS25315 e4498100732f0ecfbdd3785ff1cf2341 279 SUPERFAMILY SSF53850 89 270 1.81E-15 T 09-03-2017 RG43_RS25315 e4498100732f0ecfbdd3785ff1cf2341 279 Gene3D G3DSA:1.10.10.10 2 82 1.6E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS25315 e4498100732f0ecfbdd3785ff1cf2341 279 Hamap MF_01233 HTH-type transcriptional regulator HdfR [hdfR]. 1 278 54.904 T 09-03-2017 IPR020890 Transcription regulator HTH, HdfR GO:0003677|GO:0003700|GO:0045892 RG43_RS25315 e4498100732f0ecfbdd3785ff1cf2341 279 Pfam PF03466 LysR substrate binding domain 87 270 8.6E-14 T 09-03-2017 IPR005119 LysR, substrate-binding RG43_RS25315 e4498100732f0ecfbdd3785ff1cf2341 279 Gene3D G3DSA:3.40.190.10 89 177 1.1E-7 T 09-03-2017 RG43_RS25315 e4498100732f0ecfbdd3785ff1cf2341 279 Gene3D G3DSA:3.40.190.10 211 222 1.1E-7 T 09-03-2017 RG43_RS09085 7927ac49e2e617e4dd7eeba15d52bc70 79 Pfam PF10808 Protein of unknown function (DUF2542) 1 79 6.6E-46 T 09-03-2017 IPR020155 Uncharacterised protein family YeiS GO:0016021 RG43_RS09085 7927ac49e2e617e4dd7eeba15d52bc70 79 ProDom PD058881 MEMBRANE TRANSMEMBRANE YEIS INNER 1 79 1.0E-32 T 09-03-2017 IPR020155 Uncharacterised protein family YeiS GO:0016021 RG43_RS07150 e4776e4a90b74421af46968294e1b9ec 66 Pfam PF04384 Iron-sulphur cluster assembly 3 66 3.1E-32 T 09-03-2017 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 RG43_RS07150 e4776e4a90b74421af46968294e1b9ec 66 PIRSF PIRSF039003 3 66 3.2E-33 T 09-03-2017 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 RG43_RS07150 e4776e4a90b74421af46968294e1b9ec 66 Gene3D G3DSA:1.10.10.600 1 66 6.3E-35 T 09-03-2017 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 RG43_RS07150 e4776e4a90b74421af46968294e1b9ec 66 SUPERFAMILY SSF140319 3 64 3.79E-27 T 09-03-2017 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 RG43_RS07150 e4776e4a90b74421af46968294e1b9ec 66 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 4 66 9.9E-33 T 09-03-2017 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 RG43_RS26025 7b6012aa09e86ad305607ba4a4c2b4e0 83 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 10 71 1.5E-5 T 09-03-2017 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RG43_RS26025 7b6012aa09e86ad305607ba4a4c2b4e0 83 SUPERFAMILY SSF143120 12 68 1.57E-5 T 09-03-2017 RG43_RS16010 6cb8a9d5343d912431eee70b912cb73d 410 Pfam PF06224 Winged helix DNA-binding domain 38 381 8.5E-85 T 09-03-2017 IPR009351 Protein of unknown function DUF1006 RG43_RS01945 38ed882d36e55e5cec4d35c048c1404c 540 SUPERFAMILY SSF68923 9 227 1.17E-91 T 09-03-2017 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 RG43_RS01945 38ed882d36e55e5cec4d35c048c1404c 540 Gene3D G3DSA:3.90.228.20 351 539 4.6E-122 T 09-03-2017 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 RG43_RS01945 38ed882d36e55e5cec4d35c048c1404c 540 Gene3D G3DSA:3.90.228.20 228 290 4.6E-122 T 09-03-2017 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 RG43_RS01945 38ed882d36e55e5cec4d35c048c1404c 540 PIRSF PIRSF006294 3 540 1.6E-234 T 09-03-2017 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 RG43_RS01945 38ed882d36e55e5cec4d35c048c1404c 540 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 265 280 - T 09-03-2017 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 RG43_RS01945 38ed882d36e55e5cec4d35c048c1404c 540 Hamap MF_00453 Phosphoenolpyruvate carboxykinase [ATP] [pckA]. 16 538 56.538 T 09-03-2017 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 RG43_RS01945 38ed882d36e55e5cec4d35c048c1404c 540 SUPERFAMILY SSF53795 229 540 4.84E-131 T 09-03-2017 RG43_RS01945 38ed882d36e55e5cec4d35c048c1404c 540 Pfam PF01293 Phosphoenolpyruvate carboxykinase 22 491 1.8E-212 T 09-03-2017 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 RG43_RS01945 38ed882d36e55e5cec4d35c048c1404c 540 Gene3D G3DSA:3.40.449.10 22 227 3.7E-89 T 09-03-2017 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 RG43_RS01945 38ed882d36e55e5cec4d35c048c1404c 540 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 4 540 6.1E-299 T 09-03-2017 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 RG43_RS05385 dffccd6a5dd1444add95025b8d0e14da 442 SUPERFAMILY SSF51338 1 56 6.97E-27 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RG43_RS05385 dffccd6a5dd1444add95025b8d0e14da 442 SUPERFAMILY SSF51338 361 435 6.97E-27 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RG43_RS05385 dffccd6a5dd1444add95025b8d0e14da 442 TIGRFAM TIGR03314 Se_ssnA: putative selenium metabolism protein SsnA 2 438 1.1E-222 T 09-03-2017 IPR017700 Putative selenium metabolism protein SsnA RG43_RS05385 dffccd6a5dd1444add95025b8d0e14da 442 SUPERFAMILY SSF51556 56 334 9.83E-56 T 09-03-2017 IPR032466 Metal-dependent hydrolase RG43_RS05385 dffccd6a5dd1444add95025b8d0e14da 442 Gene3D G3DSA:2.30.40.10 325 416 1.6E-22 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RG43_RS05385 dffccd6a5dd1444add95025b8d0e14da 442 Gene3D G3DSA:3.20.20.140 61 324 9.5E-41 T 09-03-2017 RG43_RS05385 dffccd6a5dd1444add95025b8d0e14da 442 Pfam PF01979 Amidohydrolase family 53 410 5.0E-53 T 09-03-2017 IPR006680 Amidohydrolase-related GO:0016787 RG43_RS05385 dffccd6a5dd1444add95025b8d0e14da 442 Gene3D G3DSA:2.30.40.10 2 60 4.4E-9 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RG43_RS21315 505b60a9116f1d327d8513d8e65586eb 77 Gene3D G3DSA:1.10.1220.10 4 44 2.8E-5 T 09-03-2017 IPR013321 Arc-type ribbon-helix-helix GO:0006355 RG43_RS21315 505b60a9116f1d327d8513d8e65586eb 77 Pfam PF07362 Post-segregation antitoxin CcdA 8 77 2.8E-25 T 09-03-2017 IPR009956 Post-segregation antitoxin CcdA RG43_RS08590 e2a65a197fb38a1c189138d23a86bc98 376 Gene3D G3DSA:1.10.620.20 3 340 4.4E-129 T 09-03-2017 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: R-HSA-499943 RG43_RS08590 e2a65a197fb38a1c189138d23a86bc98 376 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 09-03-2017 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RG43_RS08590 e2a65a197fb38a1c189138d23a86bc98 376 Pfam PF00268 Ribonucleotide reductase, small chain 32 332 5.9E-50 T 09-03-2017 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RG43_RS08590 e2a65a197fb38a1c189138d23a86bc98 376 SUPERFAMILY SSF47240 3 340 4.33E-117 T 09-03-2017 IPR009078 Ferritin-like superfamily RG43_RS22460 82d1f729403afc3963e37d666542066a 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.9E-23 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS22460 82d1f729403afc3963e37d666542066a 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.9E-23 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS22460 82d1f729403afc3963e37d666542066a 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 1.9E-23 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS22460 82d1f729403afc3963e37d666542066a 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 1.9E-23 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS22460 82d1f729403afc3963e37d666542066a 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 1.9E-23 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS22460 82d1f729403afc3963e37d666542066a 263 SUPERFAMILY SSF51735 5 261 2.93E-56 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS22460 82d1f729403afc3963e37d666542066a 263 Gene3D G3DSA:3.40.50.720 5 260 2.9E-58 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS22460 82d1f729403afc3963e37d666542066a 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 259 3.4E-43 T 09-03-2017 RG43_RS06560 4f563011ab0db0a71851097347585757 149 SMART SM00749 28 91 3.6E-9 T 09-03-2017 IPR014004 Transport-associated and nodulation domain, bacteria RG43_RS06560 4f563011ab0db0a71851097347585757 149 SUPERFAMILY SSF54106 97 147 4.84E-8 T 09-03-2017 IPR018392 LysM domain RG43_RS06560 4f563011ab0db0a71851097347585757 149 Pfam PF01476 LysM domain 99 147 1.3E-12 T 09-03-2017 IPR018392 LysM domain RG43_RS06560 4f563011ab0db0a71851097347585757 149 Pfam PF04972 BON domain 24 89 7.1E-10 T 09-03-2017 IPR007055 BON domain RG43_RS06560 4f563011ab0db0a71851097347585757 149 SMART SM00257 98 147 3.4E-14 T 09-03-2017 IPR018392 LysM domain RG43_RS06560 4f563011ab0db0a71851097347585757 149 Gene3D G3DSA:3.10.350.10 97 148 4.0E-12 T 09-03-2017 IPR018392 LysM domain RG43_RS11025 b655b9e362d93c5fd3fada70d38c158f 192 PIRSF PIRSF003159 1 181 8.1E-92 T 09-03-2017 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 RG43_RS11025 b655b9e362d93c5fd3fada70d38c158f 192 SUPERFAMILY SSF160930 5 160 1.7E-64 T 09-03-2017 RG43_RS11025 b655b9e362d93c5fd3fada70d38c158f 192 ProDom PD016592 ACTIVATOR TRANSCRIPTIONAL FLAGELLUM FLAGELLAR TRANSCRIPTION FLHC RNA DNA-BINDING REGULATION DNA-DIRECTED 1 192 8.0E-111 T 09-03-2017 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 RG43_RS11025 b655b9e362d93c5fd3fada70d38c158f 192 Pfam PF05280 Flagellar transcriptional activator (FlhC) 1 172 7.2E-82 T 09-03-2017 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 RG43_RS11025 b655b9e362d93c5fd3fada70d38c158f 192 Hamap MF_01891 Flagellar transcriptional regulator FlhC [flhC]. 1 186 45.439 T 09-03-2017 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 RG43_RS02045 96efecbb175fa71e17b4badca3f602a9 334 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 330 6.3E-118 T 09-03-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 RG43_RS02045 96efecbb175fa71e17b4badca3f602a9 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 3.1E-30 T 09-03-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 RG43_RS02045 96efecbb175fa71e17b4badca3f602a9 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 3.1E-30 T 09-03-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 RG43_RS02045 96efecbb175fa71e17b4badca3f602a9 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 195 205 3.1E-30 T 09-03-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 RG43_RS02045 96efecbb175fa71e17b4badca3f602a9 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 3.1E-30 T 09-03-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 RG43_RS02045 96efecbb175fa71e17b4badca3f602a9 334 SUPERFAMILY SSF52374 5 330 1.73E-98 T 09-03-2017 RG43_RS02045 96efecbb175fa71e17b4badca3f602a9 334 Gene3D G3DSA:1.10.240.10 206 324 1.3E-20 T 09-03-2017 RG43_RS02045 96efecbb175fa71e17b4badca3f602a9 334 Gene3D G3DSA:3.40.50.620 4 205 6.1E-90 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS02045 96efecbb175fa71e17b4badca3f602a9 334 Pfam PF00579 tRNA synthetases class I (W and Y) 3 285 4.1E-90 T 09-03-2017 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS02045 96efecbb175fa71e17b4badca3f602a9 334 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 09-03-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS02045 96efecbb175fa71e17b4badca3f602a9 334 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 331 42.679 T 09-03-2017 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 RG43_RS02410 17619cacd8795734f1e7bcc936a920d2 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 09-03-2017 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS02410 17619cacd8795734f1e7bcc936a920d2 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 1.3E-39 T 09-03-2017 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS02410 17619cacd8795734f1e7bcc936a920d2 104 Pfam PF00467 KOW motif 8 37 7.6E-5 T 09-03-2017 IPR005824 KOW RG43_RS02410 17619cacd8795734f1e7bcc936a920d2 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 103 1.6E-23 T 09-03-2017 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS02410 17619cacd8795734f1e7bcc936a920d2 104 SUPERFAMILY SSF50104 4 100 3.19E-33 T 09-03-2017 IPR008991 Translation protein SH3-like domain RG43_RS02410 17619cacd8795734f1e7bcc936a920d2 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 20.157 T 09-03-2017 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS02410 17619cacd8795734f1e7bcc936a920d2 104 Gene3D G3DSA:2.30.30.30 3 92 3.5E-22 T 09-03-2017 IPR014722 Ribosomal protein L2 domain 2 RG43_RS02410 17619cacd8795734f1e7bcc936a920d2 104 SMART SM00739 4 31 9.8E-4 T 09-03-2017 IPR005824 KOW RG43_RS13455 31ad909cdc12d9f0ddfd23d03cb1d05d 330 Pfam PF03595 Voltage-dependent anion channel 8 305 4.3E-39 T 09-03-2017 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 RG43_RS13455 31ad909cdc12d9f0ddfd23d03cb1d05d 330 TIGRFAM TIGR00816 tdt: C4-dicarboxylate transporter/malic acid transport protein 9 312 1.2E-112 T 09-03-2017 IPR011552 Tellurite resistance protein TehA/malic acid transport protein GO:0016021 RG43_RS13160 4f56ef81d6622cc1f5000ca16467b31d 94 Pfam PF01381 Helix-turn-helix 14 65 2.3E-8 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RG43_RS13160 4f56ef81d6622cc1f5000ca16467b31d 94 Gene3D G3DSA:1.10.260.40 1 81 1.6E-29 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS13160 4f56ef81d6622cc1f5000ca16467b31d 94 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 3 81 1.3E-27 T 09-03-2017 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 RG43_RS13160 4f56ef81d6622cc1f5000ca16467b31d 94 SUPERFAMILY SSF47413 9 88 7.04E-24 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS13160 4f56ef81d6622cc1f5000ca16467b31d 94 SMART SM00530 12 67 6.6E-6 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RG43_RS13375 35c2ac5f81c9cf191b96ff4edb9dfdc6 264 Gene3D G3DSA:1.10.3720.10 9 261 1.1E-49 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS13375 35c2ac5f81c9cf191b96ff4edb9dfdc6 264 SUPERFAMILY SSF161098 6 257 4.71E-49 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS13375 35c2ac5f81c9cf191b96ff4edb9dfdc6 264 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 247 2.6E-13 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS14275 ee7c5c3da6a6c1524cfddad9735288b9 98 SUPERFAMILY SSF54909 2 98 3.58E-32 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel RG43_RS14275 ee7c5c3da6a6c1524cfddad9735288b9 98 Gene3D G3DSA:3.30.70.1060 2 98 1.3E-38 T 09-03-2017 RG43_RS14275 ee7c5c3da6a6c1524cfddad9735288b9 98 Pfam PF03795 YCII-related domain 2 95 1.6E-29 T 09-03-2017 IPR005545 YCII-related RG43_RS06360 899b8302c4332a502f3862585ac3f84f 123 Gene3D G3DSA:2.40.33.40 1 119 1.8E-45 T 09-03-2017 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 RG43_RS06360 899b8302c4332a502f3862585ac3f84f 123 TIGRFAM TIGR00849 gutA: PTS system, glucitol/sorbitol-specific IIA component 1 123 5.1E-60 T 09-03-2017 IPR018454 Phosphotransferase system, glucitol/sorbitol-specific IIA component, subgroup GO:0005737|GO:0008982|GO:0009401 RG43_RS06360 899b8302c4332a502f3862585ac3f84f 123 ProDom PD015842 PTS IIA COMPONENT GLUCITOL/SORBITOL-SPECIFIC SYSTEM ENZYME TRANSFERASE SYSTEM PHOSPHOTRANSFERASE EIIA 6 118 2.0E-60 T 09-03-2017 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 RG43_RS06360 899b8302c4332a502f3862585ac3f84f 123 Pfam PF03829 PTS system glucitol/sorbitol-specific IIA component 4 115 1.3E-38 T 09-03-2017 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 RG43_RS06360 899b8302c4332a502f3862585ac3f84f 123 SUPERFAMILY SSF141530 4 119 1.29E-37 T 09-03-2017 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 RG43_RS04255 ec8f49cfe3a98b054b94e9826a15091e 392 Pfam PF03916 Polysulphide reductase, NrfD 45 330 5.4E-18 T 09-03-2017 IPR005614 NrfD family RG43_RS26630 ec8f49cfe3a98b054b94e9826a15091e 392 Pfam PF03916 Polysulphide reductase, NrfD 45 330 5.4E-18 T 09-03-2017 IPR005614 NrfD family RG43_RS07340 0de0dddf0320d73d069bfdeb52874135 353 Pfam PF01594 Domain of unknown function DUF20 20 345 4.6E-86 T 09-03-2017 IPR002549 Transmembrane protein TqsA-like RG43_RS16885 9e1aaaaccad7cf0da30fc4a74052e1f3 246 Gene3D G3DSA:2.60.40.360 131 210 1.7E-4 T 09-03-2017 IPR008962 PapD-like RG43_RS16885 9e1aaaaccad7cf0da30fc4a74052e1f3 246 Pfam PF02368 Bacterial Ig-like domain (group 2) 161 239 1.5E-18 T 09-03-2017 IPR003343 Bacterial Ig-like, group 2 RG43_RS16885 9e1aaaaccad7cf0da30fc4a74052e1f3 246 SUPERFAMILY SSF49373 158 236 5.49E-5 T 09-03-2017 IPR008964 Invasin/intimin cell-adhesion fragments RG43_RS16885 9e1aaaaccad7cf0da30fc4a74052e1f3 246 SMART SM00635 160 240 4.9E-19 T 09-03-2017 IPR003343 Bacterial Ig-like, group 2 RG43_RS16885 9e1aaaaccad7cf0da30fc4a74052e1f3 246 Pfam PF16461 Lambda phage tail tube protein, TTP 3 154 4.8E-68 T 09-03-2017 IPR032494 Lambda phage tail tube protein RG43_RS04745 22e906d042c7e02baec09ff54e21f32b 128 Gene3D G3DSA:3.30.70.260 71 106 1.1E-4 T 09-03-2017 RG43_RS04745 22e906d042c7e02baec09ff54e21f32b 128 SUPERFAMILY SSF55021 70 107 4.84E-5 T 09-03-2017 RG43_RS01550 5f7576ae25377f28389d220901852c51 208 Pfam PF07947 YhhN-like protein 26 206 3.0E-42 T 09-03-2017 IPR012506 YhhN-like GO:0016021 RG43_RS01865 85be803216ea95f3b47de9816e85eae2 227 Gene3D G3DSA:3.40.50.2020 50 226 1.0E-26 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like RG43_RS01865 85be803216ea95f3b47de9816e85eae2 227 SUPERFAMILY SSF53271 45 225 9.96E-38 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like RG43_RS01865 85be803216ea95f3b47de9816e85eae2 227 Pfam PF00156 Phosphoribosyl transferase domain 173 224 3.4E-8 T 09-03-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 RG43_RS01865 85be803216ea95f3b47de9816e85eae2 227 TIGRFAM TIGR00201 comF: comF family protein 23 225 5.6E-82 T 09-03-2017 IPR005222 Competence protein ComF RG43_RS17595 3d072f66bee5026fadbf9e689ec98e05 29 TIGRFAM TIGR02115 potass_kdpF: K+-transporting ATPase, F subunit 6 29 3.3E-8 T 09-03-2017 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 RG43_RS17595 3d072f66bee5026fadbf9e689ec98e05 29 Pfam PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) 6 29 6.5E-6 T 09-03-2017 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 RG43_RS13445 e482aef91b2908cde8afcf2a93a519e9 222 Pfam PF11769 Protein of unknown function (DUF3313) 17 213 1.7E-57 T 09-03-2017 IPR021747 Protein of unknown function DUF3313 RG43_RS16360 b7aa2bce908e0e776a664dc5146d2d54 240 Pfam PF00881 Nitroreductase family 11 159 4.1E-17 T 09-03-2017 IPR029479 Nitroreductase Reactome: R-HSA-209968 RG43_RS16360 b7aa2bce908e0e776a664dc5146d2d54 240 PIRSF PIRSF005426 1 240 7.6E-83 T 09-03-2017 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 RG43_RS16360 b7aa2bce908e0e776a664dc5146d2d54 240 SUPERFAMILY SSF55469 1 239 4.45E-74 T 09-03-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 RG43_RS16360 b7aa2bce908e0e776a664dc5146d2d54 240 Gene3D G3DSA:3.40.109.10 2 239 4.7E-75 T 09-03-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 RG43_RS23880 235d5f00e914133e17142449ef0dcd30 285 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 200 210 - T 09-03-2017 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RG43_RS23880 235d5f00e914133e17142449ef0dcd30 285 Hamap MF_00258 Glutamate racemase [murI]. 22 274 34.828 T 09-03-2017 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RG43_RS23880 235d5f00e914133e17142449ef0dcd30 285 Gene3D G3DSA:3.40.50.1860 22 191 2.9E-49 T 09-03-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RG43_RS23880 235d5f00e914133e17142449ef0dcd30 285 Pfam PF01177 Asp/Glu/Hydantoin racemase 26 235 1.9E-25 T 09-03-2017 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RG43_RS23880 235d5f00e914133e17142449ef0dcd30 285 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 89 97 - T 09-03-2017 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RG43_RS23880 235d5f00e914133e17142449ef0dcd30 285 TIGRFAM TIGR00067 glut_race: glutamate racemase 24 272 7.0E-98 T 09-03-2017 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RG43_RS23880 235d5f00e914133e17142449ef0dcd30 285 SUPERFAMILY SSF53681 24 125 4.64E-31 T 09-03-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RG43_RS23880 235d5f00e914133e17142449ef0dcd30 285 SUPERFAMILY SSF53681 127 279 4.58E-33 T 09-03-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RG43_RS11385 eda5dee7e7f56e3874c10c3ee4dcad95 124 Gene3D G3DSA:2.60.40.1220 26 124 1.1E-32 T 09-03-2017 IPR014755 Copper resistance protein CopC/internalin, immunoglobulin-like RG43_RS11385 eda5dee7e7f56e3874c10c3ee4dcad95 124 Pfam PF04234 CopC domain 27 123 2.4E-27 T 09-03-2017 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 RG43_RS11385 eda5dee7e7f56e3874c10c3ee4dcad95 124 SUPERFAMILY SSF81296 26 124 3.29E-27 T 09-03-2017 IPR014756 Immunoglobulin E-set RG43_RS07545 13ecb3c8eba2d8e22e8867529d4f61e9 350 Pfam PF12833 Helix-turn-helix domain 262 342 8.0E-22 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS07545 13ecb3c8eba2d8e22e8867529d4f61e9 350 Gene3D G3DSA:1.10.10.60 237 295 6.9E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS07545 13ecb3c8eba2d8e22e8867529d4f61e9 350 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 293 338 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RG43_RS07545 13ecb3c8eba2d8e22e8867529d4f61e9 350 SMART SM00342 256 342 5.4E-20 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS07545 13ecb3c8eba2d8e22e8867529d4f61e9 350 SUPERFAMILY SSF46689 240 290 4.3E-7 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS00520 2c13089ccc8ac8947d75994bef52960e 213 Gene3D G3DSA:3.40.50.2020 7 212 8.0E-84 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like RG43_RS00520 2c13089ccc8ac8947d75994bef52960e 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 2.2E-72 T 09-03-2017 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RG43_RS00520 2c13089ccc8ac8947d75994bef52960e 213 SUPERFAMILY SSF53271 2 209 4.84E-51 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like RG43_RS00520 2c13089ccc8ac8947d75994bef52960e 213 Pfam PF00156 Phosphoribosyl transferase domain 48 159 1.3E-11 T 09-03-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 RG43_RS00520 2c13089ccc8ac8947d75994bef52960e 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 37.06 T 09-03-2017 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RG43_RS03775 af834dbd1b72af167b0dd42c1b4c7a58 158 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 107 112 - T 09-03-2017 IPR020891 Uncharacterised protein family UPF0758, conserved site RG43_RS03775 af834dbd1b72af167b0dd42c1b4c7a58 158 TIGRFAM TIGR00608 radc: DNA repair protein RadC 36 158 1.7E-44 T 09-03-2017 IPR001405 RadC protein RG43_RS03775 af834dbd1b72af167b0dd42c1b4c7a58 158 Gene3D G3DSA:3.40.140.10 36 158 4.4E-51 T 09-03-2017 RG43_RS03775 af834dbd1b72af167b0dd42c1b4c7a58 158 SUPERFAMILY SSF102712 83 124 3.14E-5 T 09-03-2017 RG43_RS03775 af834dbd1b72af167b0dd42c1b4c7a58 158 Pfam PF04002 RadC-like JAB domain 38 157 2.0E-44 T 09-03-2017 IPR025657 RadC-like JAB domain RG43_RS26150 af834dbd1b72af167b0dd42c1b4c7a58 158 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 107 112 - T 09-03-2017 IPR020891 Uncharacterised protein family UPF0758, conserved site RG43_RS26150 af834dbd1b72af167b0dd42c1b4c7a58 158 TIGRFAM TIGR00608 radc: DNA repair protein RadC 36 158 1.7E-44 T 09-03-2017 IPR001405 RadC protein RG43_RS26150 af834dbd1b72af167b0dd42c1b4c7a58 158 Gene3D G3DSA:3.40.140.10 36 158 4.4E-51 T 09-03-2017 RG43_RS26150 af834dbd1b72af167b0dd42c1b4c7a58 158 SUPERFAMILY SSF102712 83 124 3.14E-5 T 09-03-2017 RG43_RS26150 af834dbd1b72af167b0dd42c1b4c7a58 158 Pfam PF04002 RadC-like JAB domain 38 157 2.0E-44 T 09-03-2017 IPR025657 RadC-like JAB domain RG43_RS06230 3cd5244105afc63732ce12feda7f9cfb 373 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 2 372 1.8E-180 T 09-03-2017 IPR002780 Hydrogenase formation HypD protein GO:0046872 RG43_RS06230 3cd5244105afc63732ce12feda7f9cfb 373 PIRSF PIRSF005622 1 372 2.8E-160 T 09-03-2017 IPR002780 Hydrogenase formation HypD protein GO:0046872 RG43_RS06230 3cd5244105afc63732ce12feda7f9cfb 373 Pfam PF01924 Hydrogenase formation hypA family 15 367 7.2E-152 T 09-03-2017 IPR002780 Hydrogenase formation HypD protein GO:0046872 RG43_RS18260 4dd31fadffaa9a241f38483c086aa107 227 Gene3D G3DSA:1.10.10.10 126 223 9.8E-32 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS18260 4dd31fadffaa9a241f38483c086aa107 227 SMART SM00448 1 112 1.8E-39 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS18260 4dd31fadffaa9a241f38483c086aa107 227 SUPERFAMILY SSF52172 1 118 1.71E-38 T 09-03-2017 IPR011006 CheY-like superfamily RG43_RS18260 4dd31fadffaa9a241f38483c086aa107 227 SUPERFAMILY SSF46894 126 223 1.76E-29 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RG43_RS18260 4dd31fadffaa9a241f38483c086aa107 227 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 221 1.3E-97 T 09-03-2017 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 RG43_RS18260 4dd31fadffaa9a241f38483c086aa107 227 Gene3D G3DSA:3.40.50.2300 1 119 9.7E-37 T 09-03-2017 RG43_RS18260 4dd31fadffaa9a241f38483c086aa107 227 Pfam PF00072 Response regulator receiver domain 4 113 5.2E-27 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS18260 4dd31fadffaa9a241f38483c086aa107 227 SMART SM00862 146 221 1.2E-25 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RG43_RS18260 4dd31fadffaa9a241f38483c086aa107 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 6.1E-26 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RG43_RS12440 a3bf28657cefbddba0e39f0da47f1c95 144 SMART SM00347 22 123 4.0E-32 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RG43_RS12440 a3bf28657cefbddba0e39f0da47f1c95 144 Pfam PF01047 MarR family 29 87 1.3E-18 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RG43_RS12440 a3bf28657cefbddba0e39f0da47f1c95 144 ProSitePatterns PS01117 MarR-type HTH domain signature. 62 96 - T 09-03-2017 IPR023187 Transcriptional regulator MarR-type, conserved site RG43_RS12440 a3bf28657cefbddba0e39f0da47f1c95 144 Gene3D G3DSA:1.10.10.10 3 137 1.6E-37 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS12440 a3bf28657cefbddba0e39f0da47f1c95 144 Hamap MF_01819 Transcriptional regulator SlyA [slyA]. 1 143 45.82 T 09-03-2017 IPR023071 Transcriptional regulator, SlyA RG43_RS12440 a3bf28657cefbddba0e39f0da47f1c95 144 SUPERFAMILY SSF46785 4 139 7.67E-35 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS12440 a3bf28657cefbddba0e39f0da47f1c95 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 133 1.2E-28 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RG43_RS12440 a3bf28657cefbddba0e39f0da47f1c95 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 47 63 1.2E-28 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RG43_RS12440 a3bf28657cefbddba0e39f0da47f1c95 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 79 1.2E-28 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RG43_RS12440 a3bf28657cefbddba0e39f0da47f1c95 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 99 1.2E-28 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RG43_RS21865 d526f91c3249da88f671995e4d216fb2 716 Pfam PF02554 Carbon starvation protein CstA 34 405 1.6E-162 T 09-03-2017 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 RG43_RS21865 d526f91c3249da88f671995e4d216fb2 716 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 487 614 1.6E-34 T 09-03-2017 IPR025299 CstA, C-terminal domain RG43_RS25370 68560fdc0b6a6db66e1fbc87cf5bc402 309 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 8 302 9.9E-109 T 09-03-2017 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15 RG43_RS25370 68560fdc0b6a6db66e1fbc87cf5bc402 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 249 262 - T 09-03-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RG43_RS25370 68560fdc0b6a6db66e1fbc87cf5bc402 309 PRINTS PR00990 Ribokinase signature 36 55 9.0E-38 T 09-03-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 RG43_RS25370 68560fdc0b6a6db66e1fbc87cf5bc402 309 PRINTS PR00990 Ribokinase signature 220 231 9.0E-38 T 09-03-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 RG43_RS25370 68560fdc0b6a6db66e1fbc87cf5bc402 309 PRINTS PR00990 Ribokinase signature 9 30 9.0E-38 T 09-03-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 RG43_RS25370 68560fdc0b6a6db66e1fbc87cf5bc402 309 PRINTS PR00990 Ribokinase signature 108 121 9.0E-38 T 09-03-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 RG43_RS25370 68560fdc0b6a6db66e1fbc87cf5bc402 309 PRINTS PR00990 Ribokinase signature 176 191 9.0E-38 T 09-03-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 RG43_RS25370 68560fdc0b6a6db66e1fbc87cf5bc402 309 Gene3D G3DSA:3.40.1190.20 7 307 2.2E-98 T 09-03-2017 IPR029056 Ribokinase-like RG43_RS25370 68560fdc0b6a6db66e1fbc87cf5bc402 309 Pfam PF00294 pfkB family carbohydrate kinase 6 297 1.3E-78 T 09-03-2017 IPR011611 Carbohydrate kinase PfkB RG43_RS25370 68560fdc0b6a6db66e1fbc87cf5bc402 309 Hamap MF_01987 Ribokinase [rbsK]. 5 304 26.165 T 09-03-2017 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15 RG43_RS25370 68560fdc0b6a6db66e1fbc87cf5bc402 309 SUPERFAMILY SSF53613 7 307 1.87E-86 T 09-03-2017 IPR029056 Ribokinase-like RG43_RS17950 2580a29ab0383932419deb2a2bdb7ef8 67 Pfam PF02416 mttA/Hcf106 family 4 51 3.4E-12 T 09-03-2017 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 RG43_RS17950 2580a29ab0383932419deb2a2bdb7ef8 67 Hamap MF_00903 Probable Sec-independent protein translocase protein TatE [tatE]. 1 67 27.925 T 09-03-2017 IPR024905 Sec-independent protein translocase protein TatE RG43_RS17950 2580a29ab0383932419deb2a2bdb7ef8 67 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 62 21.266 T 09-03-2017 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 RG43_RS17950 2580a29ab0383932419deb2a2bdb7ef8 67 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 4 47 2.0E-20 T 09-03-2017 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 RG43_RS26280 0462e343621077cfe37d93d7d8c5e629 433 Pfam PF01928 CYTH domain 3 196 1.3E-37 T 09-03-2017 IPR023577 CYTH domain Reactome: R-HSA-196819 RG43_RS26280 0462e343621077cfe37d93d7d8c5e629 433 Gene3D G3DSA:2.40.320.10 1 212 9.1E-49 T 09-03-2017 IPR023577 CYTH domain Reactome: R-HSA-196819 RG43_RS26280 0462e343621077cfe37d93d7d8c5e629 433 SUPERFAMILY SSF55154 1 217 4.41E-53 T 09-03-2017 IPR033469 CYTH-like domain Reactome: R-HSA-196819 RG43_RS26280 0462e343621077cfe37d93d7d8c5e629 433 SMART SM01118 2 202 3.7E-39 T 09-03-2017 IPR023577 CYTH domain Reactome: R-HSA-196819 RG43_RS03905 0462e343621077cfe37d93d7d8c5e629 433 Pfam PF01928 CYTH domain 3 196 1.3E-37 T 09-03-2017 IPR023577 CYTH domain Reactome: R-HSA-196819 RG43_RS03905 0462e343621077cfe37d93d7d8c5e629 433 Gene3D G3DSA:2.40.320.10 1 212 9.1E-49 T 09-03-2017 IPR023577 CYTH domain Reactome: R-HSA-196819 RG43_RS03905 0462e343621077cfe37d93d7d8c5e629 433 SUPERFAMILY SSF55154 1 217 4.41E-53 T 09-03-2017 IPR033469 CYTH-like domain Reactome: R-HSA-196819 RG43_RS03905 0462e343621077cfe37d93d7d8c5e629 433 SMART SM01118 2 202 3.7E-39 T 09-03-2017 IPR023577 CYTH domain Reactome: R-HSA-196819 RG43_RS01220 ecf6fcd806768af55b16451b84dca6e6 323 Pfam PF03466 LysR substrate binding domain 113 315 1.8E-43 T 09-03-2017 IPR005119 LysR, substrate-binding RG43_RS01220 ecf6fcd806768af55b16451b84dca6e6 323 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 29 86 1.1E-17 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS01220 ecf6fcd806768af55b16451b84dca6e6 323 Gene3D G3DSA:1.10.10.10 28 107 9.6E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS01220 ecf6fcd806768af55b16451b84dca6e6 323 Gene3D G3DSA:3.40.190.10 116 216 7.8E-29 T 09-03-2017 RG43_RS01220 ecf6fcd806768af55b16451b84dca6e6 323 SUPERFAMILY SSF46785 28 108 2.47E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS01220 ecf6fcd806768af55b16451b84dca6e6 323 SUPERFAMILY SSF53850 114 321 4.71E-46 T 09-03-2017 RG43_RS07425 a5e1d627d5fdd03cf5d4c2ef878d7b4b 566 Pfam PF00672 HAMP domain 156 223 3.0E-13 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RG43_RS07425 a5e1d627d5fdd03cf5d4c2ef878d7b4b 566 SUPERFAMILY SSF158472 176 225 3.66E-7 T 09-03-2017 RG43_RS07425 a5e1d627d5fdd03cf5d4c2ef878d7b4b 566 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 468 555 8.5E-10 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS07425 a5e1d627d5fdd03cf5d4c2ef878d7b4b 566 Pfam PF07730 Histidine kinase 361 425 5.8E-19 T 09-03-2017 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 RG43_RS07425 a5e1d627d5fdd03cf5d4c2ef878d7b4b 566 SUPERFAMILY SSF55874 424 555 3.41E-19 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS07425 a5e1d627d5fdd03cf5d4c2ef878d7b4b 566 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 32 127 6.1E-22 T 09-03-2017 IPR029095 NarX-like, N-terminal RG43_RS07425 a5e1d627d5fdd03cf5d4c2ef878d7b4b 566 Gene3D G3DSA:3.30.565.10 425 558 4.3E-13 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS07425 a5e1d627d5fdd03cf5d4c2ef878d7b4b 566 SMART SM00304 174 227 2.5E-12 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RG43_RS07425 a5e1d627d5fdd03cf5d4c2ef878d7b4b 566 SMART SM00387 465 559 8.6E-15 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS25210 940973914124700c696bb519847aba25 376 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 22 370 6.3E-129 T 09-03-2017 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 RG43_RS25210 940973914124700c696bb519847aba25 376 SUPERFAMILY SSF53756 2 371 3.14E-142 T 09-03-2017 RG43_RS25210 940973914124700c696bb519847aba25 376 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 372 1.4E-186 T 09-03-2017 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 RG43_RS25210 940973914124700c696bb519847aba25 376 Gene3D G3DSA:3.40.50.2000 211 371 7.0E-68 T 09-03-2017 RG43_RS25210 940973914124700c696bb519847aba25 376 Hamap MF_02028 UDP-N-acetylglucosamine 2-epimerase [wecB]. 16 374 66.144 T 09-03-2017 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB GO:0008761|GO:0009246 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 RG43_RS25210 940973914124700c696bb519847aba25 376 Gene3D G3DSA:3.40.50.2000 2 210 5.6E-89 T 09-03-2017 RG43_RS13590 e27b980ad872eda295c049620d293dba 286 SUPERFAMILY SSF51430 11 284 3.8E-62 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain RG43_RS13590 e27b980ad872eda295c049620d293dba 286 Pfam PF00248 Aldo/keto reductase family 15 283 4.4E-47 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain RG43_RS13590 e27b980ad872eda295c049620d293dba 286 Gene3D G3DSA:3.20.20.100 12 285 3.2E-59 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain RG43_RS23055 9b8a9498f59ce42ab73cc91cc4a37a7c 147 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 5 138 2.3E-6 T 09-03-2017 IPR028973 PhnB-like RG43_RS23055 9b8a9498f59ce42ab73cc91cc4a37a7c 147 SUPERFAMILY SSF54593 2 139 2.08E-28 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RG43_RS23055 9b8a9498f59ce42ab73cc91cc4a37a7c 147 Gene3D G3DSA:3.10.180.10 7 143 1.6E-40 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RG43_RS01595 b99a60772bf9223a6f0ecb9591b86c36 367 Gene3D G3DSA:3.40.50.2300 25 224 1.2E-65 T 09-03-2017 RG43_RS01595 b99a60772bf9223a6f0ecb9591b86c36 367 SUPERFAMILY SSF53822 24 358 9.76E-89 T 09-03-2017 IPR028082 Periplasmic binding protein-like I RG43_RS01595 b99a60772bf9223a6f0ecb9591b86c36 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 254 272 4.7E-69 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RG43_RS01595 b99a60772bf9223a6f0ecb9591b86c36 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 88 98 4.7E-69 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RG43_RS01595 b99a60772bf9223a6f0ecb9591b86c36 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 277 290 4.7E-69 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RG43_RS01595 b99a60772bf9223a6f0ecb9591b86c36 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 67 85 4.7E-69 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RG43_RS01595 b99a60772bf9223a6f0ecb9591b86c36 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 327 342 4.7E-69 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RG43_RS01595 b99a60772bf9223a6f0ecb9591b86c36 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 26 42 4.7E-69 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RG43_RS01595 b99a60772bf9223a6f0ecb9591b86c36 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 48 64 4.7E-69 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RG43_RS01595 b99a60772bf9223a6f0ecb9591b86c36 367 Pfam PF13458 Periplasmic binding protein 26 344 6.8E-57 T 09-03-2017 IPR028081 Leucine-binding protein domain RG43_RS03565 099c26405ddc3eaaa3280e45e949c8a7 477 Pfam PF13520 Amino acid permease 11 439 1.5E-30 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RG43_RS03565 099c26405ddc3eaaa3280e45e949c8a7 477 PIRSF PIRSF006060 1 476 1.0E-53 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RG43_RS06905 6733efb5258e12f664db5fde36282f27 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 239 8.5E-118 T 09-03-2017 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 RG43_RS06905 6733efb5258e12f664db5fde36282f27 243 SUPERFAMILY SSF63892 4 241 5.23E-104 T 09-03-2017 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 RG43_RS06905 6733efb5258e12f664db5fde36282f27 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 136.559 T 09-03-2017 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 RG43_RS06905 6733efb5258e12f664db5fde36282f27 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 3.4E-108 T 09-03-2017 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 RG43_RS06905 6733efb5258e12f664db5fde36282f27 243 Gene3D G3DSA:3.20.20.70 3 242 3.7E-115 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS13565 9084bbde1ad13261f73c5ab5b6fb12d8 93 Pfam PF10971 Protein of unknown function (DUF2773) 13 92 6.5E-47 T 09-03-2017 IPR024497 Protein of unknown function DUF2773 RG43_RS13565 9084bbde1ad13261f73c5ab5b6fb12d8 93 ProDom PD029376 YDBD YKIA ECS0442 ECS2009 13 91 1.0E-38 T 09-03-2017 IPR024497 Protein of unknown function DUF2773 RG43_RS01535 88ff15d91aa45e3ce29c2f43434c6a78 221 Pfam PF02592 Putative vitamin uptake transporter 43 199 2.9E-37 T 09-03-2017 IPR003744 Protein of unknown function DUF165 RG43_RS01535 88ff15d91aa45e3ce29c2f43434c6a78 221 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 12 205 3.7E-69 T 09-03-2017 IPR003744 Protein of unknown function DUF165 RG43_RS05130 2850d15ff93041e80764356a1cb98b51 359 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 355 8.6E-89 T 09-03-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RG43_RS05130 2850d15ff93041e80764356a1cb98b51 359 SUPERFAMILY SSF51569 4 357 6.23E-132 T 09-03-2017 RG43_RS05130 2850d15ff93041e80764356a1cb98b51 359 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 357 5.0E-118 T 09-03-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RG43_RS05130 2850d15ff93041e80764356a1cb98b51 359 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 358 6.2E-194 T 09-03-2017 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 RG43_RS05130 2850d15ff93041e80764356a1cb98b51 359 Gene3D G3DSA:3.20.20.70 11 355 1.1E-123 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS05130 2850d15ff93041e80764356a1cb98b51 359 PIRSF PIRSF001359 13 359 2.4E-108 T 09-03-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RG43_RS05130 2850d15ff93041e80764356a1cb98b51 359 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 101 112 - T 09-03-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RG43_RS05130 2850d15ff93041e80764356a1cb98b51 359 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 172 183 - T 09-03-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RG43_RS24595 127b80239b79a7cb600905992d2616e8 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 173 186 1.7E-9 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RG43_RS24595 127b80239b79a7cb600905992d2616e8 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 96 109 1.7E-9 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RG43_RS24595 127b80239b79a7cb600905992d2616e8 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 1.7E-9 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RG43_RS24595 127b80239b79a7cb600905992d2616e8 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 1.7E-9 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RG43_RS24595 127b80239b79a7cb600905992d2616e8 199 SUPERFAMILY SSF56784 3 194 3.76E-45 T 09-03-2017 IPR023214 HAD-like domain RG43_RS24595 127b80239b79a7cb600905992d2616e8 199 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 4 184 2.2E-21 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RG43_RS24595 127b80239b79a7cb600905992d2616e8 199 Pfam PF13419 Haloacid dehalogenase-like hydrolase 50 184 9.5E-13 T 09-03-2017 IPR023214 HAD-like domain RG43_RS24595 127b80239b79a7cb600905992d2616e8 199 Gene3D G3DSA:3.40.50.1000 3 16 3.3E-36 T 09-03-2017 IPR023214 HAD-like domain RG43_RS24595 127b80239b79a7cb600905992d2616e8 199 Gene3D G3DSA:3.40.50.1000 83 196 3.3E-36 T 09-03-2017 IPR023214 HAD-like domain RG43_RS24595 127b80239b79a7cb600905992d2616e8 199 Gene3D G3DSA:1.10.150.240 17 81 4.4E-36 T 09-03-2017 IPR023198 Phosphoglycolate phosphatase, domain 2 RG43_RS24120 cbaf0c133f23c9ef70e3b9226b6a8a52 161 Gene3D G3DSA:3.50.30.40 1 156 2.3E-45 T 09-03-2017 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein RG43_RS24120 cbaf0c133f23c9ef70e3b9226b6a8a52 161 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 46.568 T 09-03-2017 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 RG43_RS24120 cbaf0c133f23c9ef70e3b9226b6a8a52 161 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 161 2.7E-89 T 09-03-2017 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 RG43_RS24120 cbaf0c133f23c9ef70e3b9226b6a8a52 161 SUPERFAMILY SSF89562 2 158 7.85E-44 T 09-03-2017 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein RG43_RS24120 cbaf0c133f23c9ef70e3b9226b6a8a52 161 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 3.0E-62 T 09-03-2017 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 RG43_RS24120 cbaf0c133f23c9ef70e3b9226b6a8a52 161 Pfam PF03737 Demethylmenaquinone methyltransferase 5 152 1.3E-35 T 09-03-2017 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein RG43_RS09560 444d7716c29fd84bffff26e86fb88358 405 TIGRFAM TIGR04010 WcaD: putative colanic acid polymerase WcaD 1 404 2.1E-263 T 09-03-2017 IPR024013 Colanic acid biosynthesis, putative colanic acid polymerase, WcaD RG43_RS25560 f6f5c18cc7e863bf25997066463a9ec0 240 Gene3D G3DSA:3.40.50.1360 1 237 2.1E-58 T 09-03-2017 RG43_RS25560 f6f5c18cc7e863bf25997066463a9ec0 240 SUPERFAMILY SSF100950 1 237 5.23E-55 T 09-03-2017 RG43_RS25560 f6f5c18cc7e863bf25997066463a9ec0 240 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 113 131 - T 09-03-2017 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 RG43_RS25560 f6f5c18cc7e863bf25997066463a9ec0 240 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 15 220 1.6E-15 T 09-03-2017 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 RG43_RS00775 e9ba7379e7f032230ade574d150c46ec 383 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 375 2.9E-123 T 09-03-2017 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 RG43_RS00775 e9ba7379e7f032230ade574d150c46ec 383 Gene3D G3DSA:1.20.1090.10 185 383 6.1E-77 T 09-03-2017 RG43_RS00775 e9ba7379e7f032230ade574d150c46ec 383 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 09-03-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 RG43_RS00775 e9ba7379e7f032230ade574d150c46ec 383 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 260 280 - T 09-03-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 RG43_RS00775 e9ba7379e7f032230ade574d150c46ec 383 Gene3D G3DSA:3.40.50.1970 3 184 9.9E-60 T 09-03-2017 RG43_RS00775 e9ba7379e7f032230ade574d150c46ec 383 SUPERFAMILY SSF56796 5 382 3.27E-135 T 09-03-2017 RG43_RS23230 da334ed8eeef88dd40ccf95d8eb9e5a8 198 Gene3D G3DSA:1.25.40.10 112 193 6.3E-35 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS23230 da334ed8eeef88dd40ccf95d8eb9e5a8 198 Gene3D G3DSA:1.25.40.10 66 111 2.1E-8 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS23230 da334ed8eeef88dd40ccf95d8eb9e5a8 198 SMART SM00028 73 106 0.0061 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 RG43_RS23230 da334ed8eeef88dd40ccf95d8eb9e5a8 198 SMART SM00028 144 177 25.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 RG43_RS23230 da334ed8eeef88dd40ccf95d8eb9e5a8 198 SUPERFAMILY SSF48452 62 175 6.45E-15 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS14405 59b14961ac8ad26755b1606f91a74246 236 Gene3D G3DSA:1.10.3480.10 10 134 1.4E-7 T 09-03-2017 IPR020945 DMSO/Nitrate reductase chaperone RG43_RS14405 59b14961ac8ad26755b1606f91a74246 236 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 8 161 6.6E-64 T 09-03-2017 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 RG43_RS14405 59b14961ac8ad26755b1606f91a74246 236 SUPERFAMILY SSF89155 5 163 1.96E-32 T 09-03-2017 IPR020945 DMSO/Nitrate reductase chaperone RG43_RS14405 59b14961ac8ad26755b1606f91a74246 236 Pfam PF02613 Nitrate reductase delta subunit 48 156 1.1E-12 T 09-03-2017 IPR020945 DMSO/Nitrate reductase chaperone RG43_RS16855 2cb81cc3adcedc65f679a6c7403bfa38 247 SMART SM00232 1 119 0.0038 T 09-03-2017 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 RG43_RS16855 2cb81cc3adcedc65f679a6c7403bfa38 247 SUPERFAMILY SSF102712 6 97 1.83E-16 T 09-03-2017 RG43_RS16855 2cb81cc3adcedc65f679a6c7403bfa38 247 Pfam PF14464 Prokaryotic homologs of the JAB domain 3 98 4.0E-13 T 09-03-2017 IPR028090 JAB domain, prokaryotic RG43_RS16855 2cb81cc3adcedc65f679a6c7403bfa38 247 SUPERFAMILY SSF54001 100 226 3.33E-17 T 09-03-2017 RG43_RS16855 2cb81cc3adcedc65f679a6c7403bfa38 247 Pfam PF00877 NlpC/P60 family 111 223 1.1E-13 T 09-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain RG43_RS16855 2cb81cc3adcedc65f679a6c7403bfa38 247 Gene3D G3DSA:3.40.140.10 5 114 1.4E-17 T 09-03-2017 RG43_RS16855 2cb81cc3adcedc65f679a6c7403bfa38 247 Gene3D G3DSA:3.90.1720.10 115 226 1.8E-17 T 09-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain RG43_RS12710 4a911123d138b035b9d9f79d84fe3f8e 297 Gene3D G3DSA:1.10.10.10 1 82 1.9E-29 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS12710 4a911123d138b035b9d9f79d84fe3f8e 297 Pfam PF03466 LysR substrate binding domain 88 296 3.4E-46 T 09-03-2017 IPR005119 LysR, substrate-binding RG43_RS12710 4a911123d138b035b9d9f79d84fe3f8e 297 Gene3D G3DSA:3.40.190.10 178 270 2.4E-31 T 09-03-2017 RG43_RS12710 4a911123d138b035b9d9f79d84fe3f8e 297 SUPERFAMILY SSF53850 89 296 7.48E-41 T 09-03-2017 RG43_RS12710 4a911123d138b035b9d9f79d84fe3f8e 297 SUPERFAMILY SSF46785 4 89 4.75E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS12710 4a911123d138b035b9d9f79d84fe3f8e 297 Gene3D G3DSA:3.40.190.10 90 177 7.1E-28 T 09-03-2017 RG43_RS12710 4a911123d138b035b9d9f79d84fe3f8e 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 2.4E-22 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS12710 4a911123d138b035b9d9f79d84fe3f8e 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.3E-9 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS12710 4a911123d138b035b9d9f79d84fe3f8e 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.3E-9 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS12710 4a911123d138b035b9d9f79d84fe3f8e 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.3E-9 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS24725 0ac24f86baefe1d56d1e249f441da72a 208 Pfam PF01323 DSBA-like thioredoxin domain 40 197 1.1E-30 T 09-03-2017 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 RG43_RS24725 0ac24f86baefe1d56d1e249f441da72a 208 SUPERFAMILY SSF52833 21 206 1.6E-46 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS24725 0ac24f86baefe1d56d1e249f441da72a 208 PIRSF PIRSF001488 1 208 1.1E-92 T 09-03-2017 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL RG43_RS24725 0ac24f86baefe1d56d1e249f441da72a 208 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 09-03-2017 IPR017937 Thioredoxin, conserved site GO:0045454 RG43_RS24725 0ac24f86baefe1d56d1e249f441da72a 208 Gene3D G3DSA:3.40.30.10 1 119 6.7E-45 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS24725 0ac24f86baefe1d56d1e249f441da72a 208 Gene3D G3DSA:3.40.30.10 121 203 1.3E-23 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS25380 9f0be77d9917763c8c42a8459a9228f5 321 Pfam PF02653 Branched-chain amino acid transport system / permease component 45 313 1.8E-50 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RG43_RS03365 7aa069e15cdb9b579fed4d5838632d21 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 6.6E-19 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS03365 7aa069e15cdb9b579fed4d5838632d21 312 SUPERFAMILY SSF46785 8 112 8.08E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS03365 7aa069e15cdb9b579fed4d5838632d21 312 SUPERFAMILY SSF53850 99 298 1.03E-29 T 09-03-2017 RG43_RS03365 7aa069e15cdb9b579fed4d5838632d21 312 Pfam PF03466 LysR substrate binding domain 98 296 1.7E-31 T 09-03-2017 IPR005119 LysR, substrate-binding RG43_RS03365 7aa069e15cdb9b579fed4d5838632d21 312 Gene3D G3DSA:1.10.10.10 8 93 1.7E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS03365 7aa069e15cdb9b579fed4d5838632d21 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 9.9E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS03365 7aa069e15cdb9b579fed4d5838632d21 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 9.9E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS03365 7aa069e15cdb9b579fed4d5838632d21 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 9.9E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS03365 7aa069e15cdb9b579fed4d5838632d21 312 Gene3D G3DSA:3.40.190.10 99 197 3.9E-20 T 09-03-2017 RG43_RS03365 7aa069e15cdb9b579fed4d5838632d21 312 Gene3D G3DSA:3.40.190.10 198 267 1.7E-7 T 09-03-2017 RG43_RS07500 b083449e21777465a7a739e80188c98f 467 Pfam PF00171 Aldehyde dehydrogenase family 34 421 1.9E-30 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RG43_RS07500 b083449e21777465a7a739e80188c98f 467 SUPERFAMILY SSF53720 35 458 5.63E-62 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RG43_RS07500 b083449e21777465a7a739e80188c98f 467 Gene3D G3DSA:3.40.309.10 250 424 1.3E-25 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RG43_RS07500 b083449e21777465a7a739e80188c98f 467 PIRSF PIRSF036410 1 467 1.4E-213 T 09-03-2017 IPR012408 Acetaldehyde/propionaldehyde dehydrogenase, EutE/PduP-related RG43_RS07500 b083449e21777465a7a739e80188c98f 467 Gene3D G3DSA:3.40.605.10 35 249 5.2E-24 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RG43_RS01160 b72f550055d1892b1bcfa59d15788667 368 ProSitePatterns PS00812 Glycosyl hydrolases family 8 signature. 114 132 - T 09-03-2017 IPR019834 Glycoside hydrolase, family 8, conserved site KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 RG43_RS01160 b72f550055d1892b1bcfa59d15788667 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 331 345 1.6E-21 T 09-03-2017 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 RG43_RS01160 b72f550055d1892b1bcfa59d15788667 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 215 226 1.6E-21 T 09-03-2017 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 RG43_RS01160 b72f550055d1892b1bcfa59d15788667 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 240 249 1.6E-21 T 09-03-2017 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 RG43_RS01160 b72f550055d1892b1bcfa59d15788667 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 114 132 1.6E-21 T 09-03-2017 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 RG43_RS01160 b72f550055d1892b1bcfa59d15788667 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 52 65 1.6E-21 T 09-03-2017 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 RG43_RS01160 b72f550055d1892b1bcfa59d15788667 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 179 196 1.6E-21 T 09-03-2017 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 RG43_RS01160 b72f550055d1892b1bcfa59d15788667 368 Pfam PF01270 Glycosyl hydrolases family 8 1 346 9.6E-149 T 09-03-2017 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 RG43_RS01160 b72f550055d1892b1bcfa59d15788667 368 Gene3D G3DSA:1.50.10.10 6 355 6.8E-101 T 09-03-2017 IPR012341 Six-hairpin glycosidase GO:0003824 RG43_RS01160 b72f550055d1892b1bcfa59d15788667 368 SUPERFAMILY SSF48208 9 350 8.66E-105 T 09-03-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 RG43_RS12635 0e26392119e010470426bdc5803cbba2 111 ProDom PD028709 MEMBRANE INNER YDGC GLPM ALGINATE BIOSYNTHESIS TRANSMEMBRANE REQUIRED FOR UNCHARACTERIZED 23 111 3.0E-45 T 09-03-2017 IPR009707 Membrane protein GlpM/YdgC RG43_RS12635 0e26392119e010470426bdc5803cbba2 111 Pfam PF06942 GlpM protein 5 111 4.0E-50 T 09-03-2017 IPR009707 Membrane protein GlpM/YdgC RG43_RS01665 c89380e31209a032fa2c027502627ff5 247 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 12 238 2.6E-42 T 09-03-2017 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 RG43_RS01665 c89380e31209a032fa2c027502627ff5 247 Gene3D G3DSA:3.20.20.190 3 240 1.4E-62 T 09-03-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RG43_RS01665 c89380e31209a032fa2c027502627ff5 247 SUPERFAMILY SSF51695 5 239 7.85E-64 T 09-03-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RG43_RS21565 e8311fdaa16f7334bb5db2e9ce2da1d0 474 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 367 464 6.5E-16 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS21565 e8311fdaa16f7334bb5db2e9ce2da1d0 474 SUPERFAMILY SSF47384 241 320 1.28E-13 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS21565 e8311fdaa16f7334bb5db2e9ce2da1d0 474 Gene3D G3DSA:3.30.565.10 306 471 6.2E-37 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS21565 e8311fdaa16f7334bb5db2e9ce2da1d0 474 Gene3D G3DSA:1.10.287.130 259 305 2.4E-9 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS21565 e8311fdaa16f7334bb5db2e9ce2da1d0 474 Pfam PF00672 HAMP domain 185 251 2.3E-10 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RG43_RS21565 e8311fdaa16f7334bb5db2e9ce2da1d0 474 SMART SM00388 255 320 2.9E-14 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS21565 e8311fdaa16f7334bb5db2e9ce2da1d0 474 SMART SM00387 363 473 2.9E-26 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS21565 e8311fdaa16f7334bb5db2e9ce2da1d0 474 SMART SM00304 204 255 4.4E-6 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RG43_RS21565 e8311fdaa16f7334bb5db2e9ce2da1d0 474 SUPERFAMILY SSF103190 76 177 1.96E-11 T 09-03-2017 IPR029151 Periplasmic sensor domain-like RG43_RS21565 e8311fdaa16f7334bb5db2e9ce2da1d0 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 414 7.3E-7 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS21565 e8311fdaa16f7334bb5db2e9ce2da1d0 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 451 7.3E-7 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS21565 e8311fdaa16f7334bb5db2e9ce2da1d0 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 428 7.3E-7 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS21565 e8311fdaa16f7334bb5db2e9ce2da1d0 474 SUPERFAMILY SSF55874 311 469 1.7E-34 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS21565 e8311fdaa16f7334bb5db2e9ce2da1d0 474 Pfam PF00512 His Kinase A (phospho-acceptor) domain 261 319 2.1E-12 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS02155 d624aa5c6f3a1dc822c7d36a4ba5e3a5 696 Pfam PF12805 FUSC-like inner membrane protein yccS 63 330 9.0E-75 T 09-03-2017 IPR032692 Integral membrane protein YccS, N-terminal RG43_RS02155 d624aa5c6f3a1dc822c7d36a4ba5e3a5 696 Pfam PF13515 Fusaric acid resistance protein-like 377 498 3.8E-19 T 09-03-2017 RG43_RS02155 d624aa5c6f3a1dc822c7d36a4ba5e3a5 696 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 12 675 1.1E-277 T 09-03-2017 IPR010020 Integral membrane protein, YccS/YhfK RG43_RS26635 d90a1ebb127f654db3d4a7c56ce5df07 567 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 39 64 - T 09-03-2017 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 RG43_RS26635 d90a1ebb127f654db3d4a7c56ce5df07 567 SUPERFAMILY SSF56762 1 552 2.75E-169 T 09-03-2017 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS26635 d90a1ebb127f654db3d4a7c56ce5df07 567 Gene3D G3DSA:1.10.645.10 1 552 1.6E-210 T 09-03-2017 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS26635 d90a1ebb127f654db3d4a7c56ce5df07 567 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 543 552 - T 09-03-2017 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 RG43_RS26635 d90a1ebb127f654db3d4a7c56ce5df07 567 Pfam PF00374 Nickel-dependent hydrogenase 39 552 5.5E-210 T 09-03-2017 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 RG43_RS04260 d90a1ebb127f654db3d4a7c56ce5df07 567 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 39 64 - T 09-03-2017 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 RG43_RS04260 d90a1ebb127f654db3d4a7c56ce5df07 567 SUPERFAMILY SSF56762 1 552 2.75E-169 T 09-03-2017 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS04260 d90a1ebb127f654db3d4a7c56ce5df07 567 Gene3D G3DSA:1.10.645.10 1 552 1.6E-210 T 09-03-2017 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS04260 d90a1ebb127f654db3d4a7c56ce5df07 567 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 543 552 - T 09-03-2017 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 RG43_RS04260 d90a1ebb127f654db3d4a7c56ce5df07 567 Pfam PF00374 Nickel-dependent hydrogenase 39 552 5.5E-210 T 09-03-2017 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 RG43_RS15320 d9e18784e818e532bdf30ea5ef71f2fa 124 Pfam PF13984 MsyB protein 3 124 3.0E-64 T 09-03-2017 IPR025729 MsyB protein RG43_RS06195 6403c4874ec72496c1968053f2bd20bf 255 SMART SM01134 73 233 1.2E-67 T 09-03-2017 RG43_RS06195 6403c4874ec72496c1968053f2bd20bf 255 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 09-03-2017 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 RG43_RS06195 6403c4874ec72496c1968053f2bd20bf 255 Pfam PF00455 DeoR C terminal sensor domain 76 231 5.2E-51 T 09-03-2017 IPR014036 DeoR C-terminal sensor domain RG43_RS06195 6403c4874ec72496c1968053f2bd20bf 255 Gene3D G3DSA:1.10.10.10 5 54 1.3E-9 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS06195 6403c4874ec72496c1968053f2bd20bf 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.8E-6 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RG43_RS06195 6403c4874ec72496c1968053f2bd20bf 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.8E-6 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RG43_RS06195 6403c4874ec72496c1968053f2bd20bf 255 SUPERFAMILY SSF100950 76 235 3.77E-28 T 09-03-2017 RG43_RS06195 6403c4874ec72496c1968053f2bd20bf 255 SUPERFAMILY SSF46785 5 58 5.94E-12 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS06195 6403c4874ec72496c1968053f2bd20bf 255 Gene3D G3DSA:3.40.50.1360 77 222 6.1E-11 T 09-03-2017 RG43_RS06195 6403c4874ec72496c1968053f2bd20bf 255 SMART SM00420 6 58 2.9E-25 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RG43_RS06195 6403c4874ec72496c1968053f2bd20bf 255 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 2.1E-16 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RG43_RS21355 d43efdacf03de1c7002c21b246706bd3 256 SUPERFAMILY SSF52402 1 253 1.53E-60 T 09-03-2017 RG43_RS21355 d43efdacf03de1c7002c21b246706bd3 256 Hamap MF_01055 Protein FixA [fixA]. 1 256 53.931 T 09-03-2017 IPR023463 Electron transfer flavoprotein, FixA subunit GO:0009055|GO:0009437 RG43_RS21355 d43efdacf03de1c7002c21b246706bd3 256 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 159 179 - T 09-03-2017 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105 RG43_RS21355 d43efdacf03de1c7002c21b246706bd3 256 Gene3D G3DSA:3.40.50.620 1 254 2.0E-70 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS21355 d43efdacf03de1c7002c21b246706bd3 256 SMART SM00893 22 215 7.7E-42 T 09-03-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 RG43_RS21355 d43efdacf03de1c7002c21b246706bd3 256 Pfam PF01012 Electron transfer flavoprotein domain 28 210 5.9E-39 T 09-03-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 RG43_RS21355 d43efdacf03de1c7002c21b246706bd3 256 PIRSF PIRSF000090 1 256 3.1E-68 T 09-03-2017 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105 RG43_RS19110 7f96e8cdcba5b70264df8173cbad350b 102 ProDom PD068630 MEMBRANE INNER YAIY TRANSMEMBRANE 1 102 2.0E-54 T 09-03-2017 IPR020513 Uncharacterised protein family, inner membrane YaiY GO:0016021 RG43_RS19110 7f96e8cdcba5b70264df8173cbad350b 102 Pfam PF10954 Protein of unknown function (DUF2755) 1 101 9.2E-50 T 09-03-2017 IPR020513 Uncharacterised protein family, inner membrane YaiY GO:0016021 RG43_RS14400 a0b2da53f49701b5a83386d556ba8ddd 225 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 1 225 1.9E-128 T 09-03-2017 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 KEGG: 00910+1.7.99.4 RG43_RS14400 a0b2da53f49701b5a83386d556ba8ddd 225 Gene3D G3DSA:1.20.950.20 2 216 9.2E-72 T 09-03-2017 RG43_RS14400 a0b2da53f49701b5a83386d556ba8ddd 225 SUPERFAMILY SSF103501 1 224 3.66E-71 T 09-03-2017 IPR023234 NarG-like domain RG43_RS14400 a0b2da53f49701b5a83386d556ba8ddd 225 Pfam PF02665 Nitrate reductase gamma subunit 5 224 6.5E-80 T 09-03-2017 IPR023234 NarG-like domain RG43_RS19020 ce537c56f270bb26b65e0ce16c00c7b2 302 Pfam PF00480 ROK family 3 301 5.9E-100 T 09-03-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 RG43_RS19020 ce537c56f270bb26b65e0ce16c00c7b2 302 Gene3D G3DSA:3.30.420.40 2 131 2.6E-37 T 09-03-2017 RG43_RS19020 ce537c56f270bb26b65e0ce16c00c7b2 302 Gene3D G3DSA:3.30.420.40 132 280 3.0E-49 T 09-03-2017 RG43_RS19020 ce537c56f270bb26b65e0ce16c00c7b2 302 SUPERFAMILY SSF53067 3 300 1.09E-62 T 09-03-2017 RG43_RS19020 ce537c56f270bb26b65e0ce16c00c7b2 302 ProSitePatterns PS01125 ROK family signature. 130 157 - T 09-03-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 RG43_RS13465 d022489dd274d96dff970ccae7a0201f 179 Gene3D G3DSA:3.40.630.30 6 175 7.9E-46 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS13465 d022489dd274d96dff970ccae7a0201f 179 SUPERFAMILY SSF55729 7 175 1.98E-43 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS13465 d022489dd274d96dff970ccae7a0201f 179 Pfam PF13302 Acetyltransferase (GNAT) domain 11 150 1.2E-21 T 09-03-2017 IPR000182 GNAT domain GO:0008080 RG43_RS20010 e39046a8c4c82c040ad5995010b743bf 417 PIRSF PIRSF000151 1 417 9.0E-180 T 09-03-2017 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 RG43_RS20010 e39046a8c4c82c040ad5995010b743bf 417 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 1 416 41.808 T 09-03-2017 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 RG43_RS20010 e39046a8c4c82c040ad5995010b743bf 417 Gene3D G3DSA:3.40.309.10 223 374 9.2E-43 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RG43_RS20010 e39046a8c4c82c040ad5995010b743bf 417 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 9 406 1.3E-202 T 09-03-2017 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 RG43_RS20010 e39046a8c4c82c040ad5995010b743bf 417 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 323 344 - T 09-03-2017 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 RG43_RS20010 e39046a8c4c82c040ad5995010b743bf 417 Pfam PF00171 Aldehyde dehydrogenase family 8 282 1.9E-16 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RG43_RS20010 e39046a8c4c82c040ad5995010b743bf 417 Gene3D G3DSA:3.40.605.10 375 416 2.6E-104 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RG43_RS20010 e39046a8c4c82c040ad5995010b743bf 417 Gene3D G3DSA:3.40.605.10 2 220 2.6E-104 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RG43_RS20010 e39046a8c4c82c040ad5995010b743bf 417 SUPERFAMILY SSF53720 3 416 2.23E-116 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RG43_RS10700 b08292274d443df3924e495d6c41199a 137 Pfam PF16973 Flagellar motor switch protein FliN N-terminal 1 49 1.5E-19 T 09-03-2017 IPR031576 Flagellar motor switch protein FliN, N-terminal RG43_RS10700 b08292274d443df3924e495d6c41199a 137 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 53 128 8.6E-34 T 09-03-2017 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 RG43_RS10700 b08292274d443df3924e495d6c41199a 137 Gene3D G3DSA:2.30.330.10 52 136 3.8E-39 T 09-03-2017 RG43_RS10700 b08292274d443df3924e495d6c41199a 137 SUPERFAMILY SSF101801 54 135 4.32E-27 T 09-03-2017 IPR001543 Surface presentation of antigen (SpoA) RG43_RS10700 b08292274d443df3924e495d6c41199a 137 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 56 126 3.3E-26 T 09-03-2017 IPR001543 Surface presentation of antigen (SpoA) RG43_RS10700 b08292274d443df3924e495d6c41199a 137 PRINTS PR00956 Flagellar motor switch protein FliN signature 102 117 1.8E-30 T 09-03-2017 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 RG43_RS10700 b08292274d443df3924e495d6c41199a 137 PRINTS PR00956 Flagellar motor switch protein FliN signature 56 72 1.8E-30 T 09-03-2017 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 RG43_RS10700 b08292274d443df3924e495d6c41199a 137 PRINTS PR00956 Flagellar motor switch protein FliN signature 73 89 1.8E-30 T 09-03-2017 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 RG43_RS10700 b08292274d443df3924e495d6c41199a 137 PRINTS PR00956 Flagellar motor switch protein FliN signature 89 102 1.8E-30 T 09-03-2017 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 RG43_RS14685 0d7a2a61648ce3de02d0bcbe3cffb739 219 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 18 210 4.1E-53 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RG43_RS14685 0d7a2a61648ce3de02d0bcbe3cffb739 219 SUPERFAMILY SSF56529 11 213 2.88E-70 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RG43_RS14685 0d7a2a61648ce3de02d0bcbe3cffb739 219 Gene3D G3DSA:3.90.850.10 14 218 4.9E-79 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RG43_RS07590 33596f94ae3ec6a30b2bc4fe1b8d3d7d 298 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 6 296 9.1E-155 T 09-03-2017 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126 RG43_RS07590 33596f94ae3ec6a30b2bc4fe1b8d3d7d 298 Pfam PF01380 SIS domain 129 208 8.6E-9 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 RG43_RS07590 33596f94ae3ec6a30b2bc4fe1b8d3d7d 298 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 2 295 42.14 T 09-03-2017 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126 RG43_RS07590 33596f94ae3ec6a30b2bc4fe1b8d3d7d 298 SUPERFAMILY SSF53697 6 249 2.45E-65 T 09-03-2017 RG43_RS07590 33596f94ae3ec6a30b2bc4fe1b8d3d7d 298 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 185 202 - T 09-03-2017 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 RG43_RS07590 33596f94ae3ec6a30b2bc4fe1b8d3d7d 298 Gene3D G3DSA:3.40.50.10490 4 250 1.4E-83 T 09-03-2017 RG43_RS00485 4181cf83cf26ea2fecc18adef347d76c 91 Gene3D G3DSA:3.90.940.10 1 78 2.6E-15 T 09-03-2017 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 RG43_RS00485 4181cf83cf26ea2fecc18adef347d76c 91 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.321 T 09-03-2017 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RG43_RS00485 4181cf83cf26ea2fecc18adef347d76c 91 SMART SM01409 8 61 1.3E-15 T 09-03-2017 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 RG43_RS00485 4181cf83cf26ea2fecc18adef347d76c 91 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 60 1.7E-30 T 09-03-2017 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RG43_RS00485 4181cf83cf26ea2fecc18adef347d76c 91 SUPERFAMILY SSF63562 1 79 8.2E-25 T 09-03-2017 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 RG43_RS00485 4181cf83cf26ea2fecc18adef347d76c 91 Pfam PF01192 RNA polymerase Rpb6 10 59 1.6E-15 T 09-03-2017 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 RG43_RS20630 a439eeb3e2f3624ddcc9e7792d569f06 252 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 189 206 - T 09-03-2017 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 RG43_RS20630 a439eeb3e2f3624ddcc9e7792d569f06 252 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 16 244 40.196 T 09-03-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 RG43_RS20630 a439eeb3e2f3624ddcc9e7792d569f06 252 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 18 243 1.5E-107 T 09-03-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 RG43_RS20630 a439eeb3e2f3624ddcc9e7792d569f06 252 Pfam PF01255 Putative undecaprenyl diphosphate synthase 23 243 1.3E-81 T 09-03-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 RG43_RS20630 a439eeb3e2f3624ddcc9e7792d569f06 252 Gene3D G3DSA:3.40.1180.10 18 246 1.1E-98 T 09-03-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 RG43_RS20630 a439eeb3e2f3624ddcc9e7792d569f06 252 SUPERFAMILY SSF64005 18 239 6.02E-88 T 09-03-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 RG43_RS20130 c8626fede30a2034bcc0220a965772f3 82 Gene3D G3DSA:1.10.10.10 8 72 7.2E-5 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS20130 c8626fede30a2034bcc0220a965772f3 82 Pfam PF13551 Winged helix-turn helix 32 77 4.9E-8 T 09-03-2017 RG43_RS20130 c8626fede30a2034bcc0220a965772f3 82 SUPERFAMILY SSF46689 15 79 6.45E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS18860 0b7a860a06b7fba80c65a656bb7197bb 454 SUPERFAMILY SSF103473 6 391 6.54E-62 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS18860 0b7a860a06b7fba80c65a656bb7197bb 454 Pfam PF07690 Major Facilitator Superfamily 20 354 3.2E-39 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS18860 0b7a860a06b7fba80c65a656bb7197bb 454 Gene3D G3DSA:1.20.1250.20 212 392 3.2E-19 T 09-03-2017 RG43_RS18860 0b7a860a06b7fba80c65a656bb7197bb 454 Gene3D G3DSA:1.20.1250.20 11 193 2.1E-34 T 09-03-2017 RG43_RS15550 06ce0b32567187582fcdf06931fa6da0 413 ProSitePatterns PS00778 Histidine acid phosphatases active site signature. 305 321 - T 09-03-2017 IPR033379 Histidine acid phosphatase active site RG43_RS15550 06ce0b32567187582fcdf06931fa6da0 413 Gene3D G3DSA:3.40.50.1240 142 274 3.5E-69 T 09-03-2017 IPR029033 Histidine phosphatase superfamily RG43_RS15550 06ce0b32567187582fcdf06931fa6da0 413 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 31 363 4.1E-16 T 09-03-2017 IPR000560 Histidine phosphatase superfamily, clade-2 GO:0003993 RG43_RS15550 06ce0b32567187582fcdf06931fa6da0 413 ProSitePatterns PS00616 Histidine acid phosphatases phosphohistidine signature. 31 45 - T 09-03-2017 IPR033379 Histidine acid phosphatase active site RG43_RS15550 06ce0b32567187582fcdf06931fa6da0 413 SUPERFAMILY SSF53254 24 411 1.65E-78 T 09-03-2017 IPR029033 Histidine phosphatase superfamily RG43_RS15550 06ce0b32567187582fcdf06931fa6da0 413 Gene3D G3DSA:3.40.50.1240 276 412 3.0E-85 T 09-03-2017 IPR029033 Histidine phosphatase superfamily RG43_RS15550 06ce0b32567187582fcdf06931fa6da0 413 Gene3D G3DSA:3.40.50.1240 26 141 3.0E-85 T 09-03-2017 IPR029033 Histidine phosphatase superfamily RG43_RS16250 7b8e861e6a3aabfa613a68e84d3779bd 322 PRINTS PR00409 Phthalate dioxygenase reductase family signature 115 134 5.7E-6 T 09-03-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 RG43_RS16250 7b8e861e6a3aabfa613a68e84d3779bd 322 PRINTS PR00409 Phthalate dioxygenase reductase family signature 55 69 5.7E-6 T 09-03-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 RG43_RS16250 7b8e861e6a3aabfa613a68e84d3779bd 322 PRINTS PR00409 Phthalate dioxygenase reductase family signature 197 205 5.7E-6 T 09-03-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 RG43_RS16250 7b8e861e6a3aabfa613a68e84d3779bd 322 SUPERFAMILY SSF54292 221 321 1.7E-25 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RG43_RS16250 7b8e861e6a3aabfa613a68e84d3779bd 322 Gene3D G3DSA:3.40.50.80 104 225 5.5E-23 T 09-03-2017 RG43_RS16250 7b8e861e6a3aabfa613a68e84d3779bd 322 Gene3D G3DSA:2.40.30.10 10 103 2.6E-18 T 09-03-2017 RG43_RS16250 7b8e861e6a3aabfa613a68e84d3779bd 322 SUPERFAMILY SSF52343 95 220 7.46E-25 T 09-03-2017 RG43_RS16250 7b8e861e6a3aabfa613a68e84d3779bd 322 Pfam PF00970 Oxidoreductase FAD-binding domain 17 104 1.1E-7 T 09-03-2017 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 RG43_RS16250 7b8e861e6a3aabfa613a68e84d3779bd 322 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 248 315 3.0E-14 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RG43_RS16250 7b8e861e6a3aabfa613a68e84d3779bd 322 Pfam PF00175 Oxidoreductase NAD-binding domain 116 210 5.1E-7 T 09-03-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 RG43_RS16250 7b8e861e6a3aabfa613a68e84d3779bd 322 Gene3D G3DSA:3.10.20.30 226 321 3.5E-26 T 09-03-2017 IPR012675 Beta-grasp domain RG43_RS16250 7b8e861e6a3aabfa613a68e84d3779bd 322 SUPERFAMILY SSF63380 9 105 4.15E-21 T 09-03-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RG43_RS20805 eb834706462b664b092d1e78eea3f3d0 196 Gene3D G3DSA:2.60.40.1090 30 196 4.2E-16 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS20805 eb834706462b664b092d1e78eea3f3d0 196 Pfam PF00419 Fimbrial protein 35 196 4.9E-9 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS20805 eb834706462b664b092d1e78eea3f3d0 196 SUPERFAMILY SSF49401 32 196 2.88E-15 T 09-03-2017 IPR008966 Adhesion domain RG43_RS21165 82198aac6caeb7aaf6ef938feb1a4915 314 Gene3D G3DSA:3.40.190.10 105 187 3.2E-21 T 09-03-2017 RG43_RS21165 82198aac6caeb7aaf6ef938feb1a4915 314 Gene3D G3DSA:3.40.190.10 287 314 3.2E-21 T 09-03-2017 RG43_RS21165 82198aac6caeb7aaf6ef938feb1a4915 314 Gene3D G3DSA:1.10.10.10 16 100 1.2E-33 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS21165 82198aac6caeb7aaf6ef938feb1a4915 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 24 81 4.5E-18 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS21165 82198aac6caeb7aaf6ef938feb1a4915 314 Gene3D G3DSA:3.40.190.10 188 281 3.2E-18 T 09-03-2017 RG43_RS21165 82198aac6caeb7aaf6ef938feb1a4915 314 SUPERFAMILY SSF46785 19 98 1.5E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS21165 82198aac6caeb7aaf6ef938feb1a4915 314 SUPERFAMILY SSF53850 105 311 7.6E-40 T 09-03-2017 RG43_RS21165 82198aac6caeb7aaf6ef938feb1a4915 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 60 2.1E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS21165 82198aac6caeb7aaf6ef938feb1a4915 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.1E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS21165 82198aac6caeb7aaf6ef938feb1a4915 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 60 71 2.1E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS21165 82198aac6caeb7aaf6ef938feb1a4915 314 Pfam PF03466 LysR substrate binding domain 137 309 1.8E-16 T 09-03-2017 IPR005119 LysR, substrate-binding RG43_RS17740 1a4dc8343b5f29efbb9a0fd6d8ec0df8 250 Gene3D G3DSA:3.40.50.10410 83 173 1.2E-31 T 09-03-2017 IPR023215 Nitrophenylphosphatase-like domain RG43_RS17740 1a4dc8343b5f29efbb9a0fd6d8ec0df8 250 Gene3D G3DSA:3.40.50.1000 1 79 3.6E-39 T 09-03-2017 IPR023214 HAD-like domain RG43_RS17740 1a4dc8343b5f29efbb9a0fd6d8ec0df8 250 Gene3D G3DSA:3.40.50.1000 174 247 3.6E-39 T 09-03-2017 IPR023214 HAD-like domain RG43_RS17740 1a4dc8343b5f29efbb9a0fd6d8ec0df8 250 Pfam PF13344 Haloacid dehalogenase-like hydrolase 6 105 1.8E-22 T 09-03-2017 IPR006357 HAD-superfamily hydrolase, subfamily IIA RG43_RS17740 1a4dc8343b5f29efbb9a0fd6d8ec0df8 250 Pfam PF13242 HAD-hyrolase-like 174 246 4.5E-20 T 09-03-2017 RG43_RS17740 1a4dc8343b5f29efbb9a0fd6d8ec0df8 250 SUPERFAMILY SSF56784 1 247 5.7E-65 T 09-03-2017 IPR023214 HAD-like domain RG43_RS17740 1a4dc8343b5f29efbb9a0fd6d8ec0df8 250 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 6 223 2.1E-65 T 09-03-2017 IPR006357 HAD-superfamily hydrolase, subfamily IIA RG43_RS09995 18d1d9ef1d1da1c26ce0a4a83dd2a7a3 135 Pfam PF11682 Probable zinc-ribbon 2 124 1.8E-70 T 09-03-2017 IPR021696 Protein of unknown function DUF3279 RG43_RS26070 e901079333f6adfe24160c1eeef4d831 173 SUPERFAMILY SSF50199 36 167 1.44E-40 T 09-03-2017 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold RG43_RS26070 e901079333f6adfe24160c1eeef4d831 173 Gene3D G3DSA:2.40.50.90 42 166 6.8E-34 T 09-03-2017 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold RG43_RS26070 e901079333f6adfe24160c1eeef4d831 173 SMART SM00318 39 160 1.4E-53 T 09-03-2017 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold RG43_RS26070 e901079333f6adfe24160c1eeef4d831 173 ProSitePatterns PS01123 Thermonuclease family signature 1. 50 74 - T 09-03-2017 IPR002071 Thermonuclease active site GO:0003676|GO:0004518 RG43_RS26070 e901079333f6adfe24160c1eeef4d831 173 ProSitePatterns PS01284 Thermonuclease family signature 2. 104 114 - T 09-03-2017 IPR002071 Thermonuclease active site GO:0003676|GO:0004518 RG43_RS26070 e901079333f6adfe24160c1eeef4d831 173 Pfam PF00565 Staphylococcal nuclease homologue 64 160 3.3E-28 T 09-03-2017 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold RG43_RS09450 27be6a5249b0f6efc9a006877beb5315 1025 Hamap MF_01424 Multidrug resistance protein MdtC [mdtC]. 1 1024 27.154 T 09-03-2017 IPR023931 Multidrug resistance protein MdtC RG43_RS09450 27be6a5249b0f6efc9a006877beb5315 1025 SUPERFAMILY SSF82693 788 833 2.62E-6 T 09-03-2017 RG43_RS09450 27be6a5249b0f6efc9a006877beb5315 1025 SUPERFAMILY SSF82693 662 701 2.62E-6 T 09-03-2017 RG43_RS09450 27be6a5249b0f6efc9a006877beb5315 1025 Gene3D G3DSA:3.30.70.1430 40 142 4.7E-30 T 09-03-2017 RG43_RS09450 27be6a5249b0f6efc9a006877beb5315 1025 Gene3D G3DSA:3.30.70.1430 557 649 9.0E-14 T 09-03-2017 RG43_RS09450 27be6a5249b0f6efc9a006877beb5315 1025 SUPERFAMILY SSF82866 291 490 3.92E-49 T 09-03-2017 RG43_RS09450 27be6a5249b0f6efc9a006877beb5315 1025 SUPERFAMILY SSF82693 555 650 1.4E-18 T 09-03-2017 RG43_RS09450 27be6a5249b0f6efc9a006877beb5315 1025 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.9E-88 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS09450 27be6a5249b0f6efc9a006877beb5315 1025 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.9E-88 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS09450 27be6a5249b0f6efc9a006877beb5315 1025 PRINTS PR00702 Acriflavin resistance protein family signature 605 619 1.9E-88 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS09450 27be6a5249b0f6efc9a006877beb5315 1025 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.9E-88 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS09450 27be6a5249b0f6efc9a006877beb5315 1025 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.9E-88 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS09450 27be6a5249b0f6efc9a006877beb5315 1025 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.9E-88 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS09450 27be6a5249b0f6efc9a006877beb5315 1025 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.9E-88 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS09450 27be6a5249b0f6efc9a006877beb5315 1025 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.9E-88 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS09450 27be6a5249b0f6efc9a006877beb5315 1025 PRINTS PR00702 Acriflavin resistance protein family signature 542 559 1.9E-88 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS09450 27be6a5249b0f6efc9a006877beb5315 1025 SUPERFAMILY SSF82714 183 266 5.1E-16 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RG43_RS09450 27be6a5249b0f6efc9a006877beb5315 1025 SUPERFAMILY SSF82693 40 135 4.19E-23 T 09-03-2017 RG43_RS09450 27be6a5249b0f6efc9a006877beb5315 1025 SUPERFAMILY SSF82693 136 182 4.71E-23 T 09-03-2017 RG43_RS09450 27be6a5249b0f6efc9a006877beb5315 1025 SUPERFAMILY SSF82693 268 324 4.71E-23 T 09-03-2017 RG43_RS09450 27be6a5249b0f6efc9a006877beb5315 1025 SUPERFAMILY SSF82714 703 785 4.32E-16 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RG43_RS09450 27be6a5249b0f6efc9a006877beb5315 1025 Gene3D G3DSA:1.10.3850.10 794 1010 6.6E-54 T 09-03-2017 RG43_RS09450 27be6a5249b0f6efc9a006877beb5315 1025 SUPERFAMILY SSF82866 813 1010 2.75E-43 T 09-03-2017 RG43_RS09450 27be6a5249b0f6efc9a006877beb5315 1025 Gene3D G3DSA:1.20.1640.10 285 500 3.8E-59 T 09-03-2017 RG43_RS09450 27be6a5249b0f6efc9a006877beb5315 1025 Gene3D G3DSA:3.30.2090.10 183 264 6.2E-16 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RG43_RS09450 27be6a5249b0f6efc9a006877beb5315 1025 Gene3D G3DSA:3.30.2090.10 703 784 2.5E-16 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RG43_RS09450 27be6a5249b0f6efc9a006877beb5315 1025 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 0.0 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RG43_RS13840 67ca53ff3787a8c90ede3e68833230fb 293 SUPERFAMILY SSF161098 58 282 1.27E-56 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS13840 67ca53ff3787a8c90ede3e68833230fb 293 Gene3D G3DSA:1.10.3720.10 12 284 3.0E-59 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS13840 67ca53ff3787a8c90ede3e68833230fb 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 282 1.5E-23 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS01000 314dd3192968035d27aeca329477bec7 232 Pfam PF03797 Autotransporter beta-domain 90 215 1.7E-10 T 09-03-2017 IPR005546 Autotransporter beta-domain RG43_RS01000 314dd3192968035d27aeca329477bec7 232 Gene3D G3DSA:2.40.128.130 88 232 5.4E-9 T 09-03-2017 IPR005546 Autotransporter beta-domain RG43_RS01000 314dd3192968035d27aeca329477bec7 232 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 88 232 2.4E-5 T 09-03-2017 IPR006315 Outer membrane autotransporter barrel GO:0019867 RG43_RS01000 314dd3192968035d27aeca329477bec7 232 SUPERFAMILY SSF103515 87 232 1.83E-11 T 09-03-2017 IPR005546 Autotransporter beta-domain RG43_RS01000 314dd3192968035d27aeca329477bec7 232 PIRSF PIRSF030748 1 232 4.9E-151 T 09-03-2017 IPR016955 Autotransporter, YhjY, predicted RG43_RS21440 25ec4f764e87614d7859601d579758d8 313 Pfam PF06574 FAD synthetase 13 168 6.0E-58 T 09-03-2017 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RG43_RS21440 25ec4f764e87614d7859601d579758d8 313 SMART SM00904 184 308 1.2E-61 T 09-03-2017 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 RG43_RS21440 25ec4f764e87614d7859601d579758d8 313 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 19 307 1.5E-123 T 09-03-2017 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RG43_RS21440 25ec4f764e87614d7859601d579758d8 313 PIRSF PIRSF004491 1 312 8.9E-105 T 09-03-2017 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RG43_RS21440 25ec4f764e87614d7859601d579758d8 313 Gene3D G3DSA:3.40.50.620 1 180 2.6E-66 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS21440 25ec4f764e87614d7859601d579758d8 313 Gene3D G3DSA:2.40.30.30 181 307 4.1E-39 T 09-03-2017 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 Reactome: R-HSA-196843 RG43_RS21440 25ec4f764e87614d7859601d579758d8 313 Pfam PF01687 Riboflavin kinase 185 307 4.1E-37 T 09-03-2017 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 RG43_RS21440 25ec4f764e87614d7859601d579758d8 313 SUPERFAMILY SSF52374 17 177 6.19E-33 T 09-03-2017 RG43_RS21440 25ec4f764e87614d7859601d579758d8 313 SUPERFAMILY SSF82114 175 308 3.27E-43 T 09-03-2017 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 RG43_RS08970 7fd73c4afed39d6645c6af13b63d57ac 312 Hamap MF_01876 Pseudouridine-5'-phosphate glycosidase [psuG]. 15 309 44.019 T 09-03-2017 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 RG43_RS08970 7fd73c4afed39d6645c6af13b63d57ac 312 Pfam PF04227 Indigoidine synthase A like protein 16 306 1.3E-131 T 09-03-2017 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 RG43_RS08970 7fd73c4afed39d6645c6af13b63d57ac 312 SUPERFAMILY SSF110581 9 308 4.84E-118 T 09-03-2017 RG43_RS25890 f832b0eb4a321909cc1ae5dfeb11c13d 280 Pfam PF13708 Domain of unknown function (DUF4942) 88 275 8.4E-60 T 09-03-2017 IPR031339 Domain of unknown function DUF4942 RG43_RS24575 8c8aab9208a1820021831579ce05162f 302 SUPERFAMILY SSF53474 40 297 3.22E-63 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS24575 8c8aab9208a1820021831579ce05162f 302 Gene3D G3DSA:3.40.50.1820 5 297 6.0E-83 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS24575 8c8aab9208a1820021831579ce05162f 302 Pfam PF07859 alpha/beta hydrolase fold 75 280 5.2E-65 T 09-03-2017 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 RG43_RS24575 8c8aab9208a1820021831579ce05162f 302 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 147 159 - T 09-03-2017 IPR033140 Lipase, GDXG, putative serine active site RG43_RS12675 b5a4baf3fdd1848d2adfdb8aa5d83a74 121 Pfam PF00893 Small Multidrug Resistance protein 4 94 3.1E-26 T 09-03-2017 IPR000390 Small multidrug resistance protein family GO:0016021 RG43_RS12675 b5a4baf3fdd1848d2adfdb8aa5d83a74 121 SUPERFAMILY SSF103481 8 107 8.37E-17 T 09-03-2017 RG43_RS12675 b5a4baf3fdd1848d2adfdb8aa5d83a74 121 Hamap MF_01598 Spermidine export protein MdtJ [mdtJ]. 2 121 29.763 T 09-03-2017 IPR023740 Spermidine export protein MdtJ GO:0005886|GO:0015606|GO:0015848 RG43_RS21125 049383c87ab3f6e97f9a4884f97c116f 121 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 36 118 1.1E-28 T 09-03-2017 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 RG43_RS21125 049383c87ab3f6e97f9a4884f97c116f 121 Hamap MF_00910 Cell division protein FtsL [ftsL]. 35 118 16.85 T 09-03-2017 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 RG43_RS21125 049383c87ab3f6e97f9a4884f97c116f 121 Pfam PF04999 Cell division protein FtsL 25 119 2.3E-35 T 09-03-2017 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 RG43_RS14475 d63d61068f94d5289d7c8b5c6079f26a 284 Gene3D G3DSA:3.20.20.70 18 281 1.1E-108 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS14475 d63d61068f94d5289d7c8b5c6079f26a 284 SUPERFAMILY SSF51569 3 278 1.1E-103 T 09-03-2017 RG43_RS14475 d63d61068f94d5289d7c8b5c6079f26a 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 1.0E-118 T 09-03-2017 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 RG43_RS14475 d63d61068f94d5289d7c8b5c6079f26a 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 50.268 T 09-03-2017 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 RG43_RS14475 d63d61068f94d5289d7c8b5c6079f26a 284 Pfam PF00793 DAHP synthetase I family 10 274 2.0E-68 T 09-03-2017 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 RG43_RS25945 dab9c84de65a68516d6133327abeffdc 294 SUPERFAMILY SSF52540 22 166 9.27E-26 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25945 dab9c84de65a68516d6133327abeffdc 294 Gene3D G3DSA:3.40.50.300 51 223 1.5E-24 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25945 dab9c84de65a68516d6133327abeffdc 294 Pfam PF01926 50S ribosome-binding GTPase 41 141 1.2E-13 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 RG43_RS25945 dab9c84de65a68516d6133327abeffdc 294 Gene3D G3DSA:3.40.50.300 21 50 1.4E-4 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS04530 dab9c84de65a68516d6133327abeffdc 294 SUPERFAMILY SSF52540 22 166 9.27E-26 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS04530 dab9c84de65a68516d6133327abeffdc 294 Gene3D G3DSA:3.40.50.300 51 223 1.5E-24 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS04530 dab9c84de65a68516d6133327abeffdc 294 Pfam PF01926 50S ribosome-binding GTPase 41 141 1.2E-13 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 RG43_RS04530 dab9c84de65a68516d6133327abeffdc 294 Gene3D G3DSA:3.40.50.300 21 50 1.4E-4 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS22865 c22b9415d482ca5850e21e5b22a343c4 112 Pfam PF03091 CutA1 divalent ion tolerance protein 12 109 9.0E-34 T 09-03-2017 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 RG43_RS22865 c22b9415d482ca5850e21e5b22a343c4 112 SUPERFAMILY SSF54913 11 111 4.45E-35 T 09-03-2017 IPR011322 Nitrogen regulatory PII-like, alpha/beta RG43_RS22865 c22b9415d482ca5850e21e5b22a343c4 112 Gene3D G3DSA:3.30.70.830 3 111 2.6E-40 T 09-03-2017 RG43_RS10245 30036f19a18c77742db5a4055b5d86eb 823 Gene3D G3DSA:3.30.420.10 643 814 8.7E-12 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS10245 30036f19a18c77742db5a4055b5d86eb 823 Pfam PF16473 3' exoribonuclease, RNase T-like 642 813 1.5E-53 T 09-03-2017 IPR033390 3'-5' exoribonuclease Rv2179c-like domain RG43_RS10245 30036f19a18c77742db5a4055b5d86eb 823 SUPERFAMILY SSF53098 642 816 3.33E-23 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS24280 93046b8db280dd4d72bcc247ba4bbdb3 150 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 3 148 4.2E-35 T 09-03-2017 IPR006522 Phage virion morphogensis protein RG43_RS24280 93046b8db280dd4d72bcc247ba4bbdb3 150 Pfam PF05069 Phage virion morphogenesis family 3 149 2.4E-42 T 09-03-2017 IPR006522 Phage virion morphogensis protein RG43_RS20045 2c80bd7fe12db4e04aa73a36258f2060 204 Pfam PF00472 RF-1 domain 106 182 8.2E-23 T 09-03-2017 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RG43_RS20045 2c80bd7fe12db4e04aa73a36258f2060 204 TIGRFAM TIGR03072 release_prfH: putative peptide chain release factor H 2 201 4.0E-99 T 09-03-2017 IPR017509 Putative peptide chain release factor H RG43_RS20045 2c80bd7fe12db4e04aa73a36258f2060 204 Gene3D G3DSA:3.30.160.20 107 173 5.0E-26 T 09-03-2017 IPR014720 Double-stranded RNA-binding domain RG43_RS20045 2c80bd7fe12db4e04aa73a36258f2060 204 SUPERFAMILY SSF75620 3 196 4.05E-47 T 09-03-2017 RG43_RS20045 2c80bd7fe12db4e04aa73a36258f2060 204 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 115 131 - T 09-03-2017 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RG43_RS15165 f3f39c8216d642b13227d2a5f2dc6908 313 Pfam PF10135 Rod binding protein 50 97 9.8E-18 T 09-03-2017 IPR019301 Flagellar protein FlgJ, N-terminal RG43_RS15165 f3f39c8216d642b13227d2a5f2dc6908 313 SMART SM00047 142 306 5.1E-73 T 09-03-2017 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 RG43_RS15165 f3f39c8216d642b13227d2a5f2dc6908 313 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 12 295 1.0E-131 T 09-03-2017 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 RG43_RS15165 f3f39c8216d642b13227d2a5f2dc6908 313 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 161 295 2.8E-20 T 09-03-2017 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 RG43_RS15165 f3f39c8216d642b13227d2a5f2dc6908 313 PRINTS PR01002 Flagellar protein FlgJ signature 213 234 5.8E-180 T 09-03-2017 RG43_RS15165 f3f39c8216d642b13227d2a5f2dc6908 313 PRINTS PR01002 Flagellar protein FlgJ signature 295 312 5.8E-180 T 09-03-2017 RG43_RS15165 f3f39c8216d642b13227d2a5f2dc6908 313 PRINTS PR01002 Flagellar protein FlgJ signature 113 138 5.8E-180 T 09-03-2017 RG43_RS15165 f3f39c8216d642b13227d2a5f2dc6908 313 PRINTS PR01002 Flagellar protein FlgJ signature 28 51 5.8E-180 T 09-03-2017 RG43_RS15165 f3f39c8216d642b13227d2a5f2dc6908 313 PRINTS PR01002 Flagellar protein FlgJ signature 257 276 5.8E-180 T 09-03-2017 RG43_RS15165 f3f39c8216d642b13227d2a5f2dc6908 313 PRINTS PR01002 Flagellar protein FlgJ signature 191 212 5.8E-180 T 09-03-2017 RG43_RS15165 f3f39c8216d642b13227d2a5f2dc6908 313 PRINTS PR01002 Flagellar protein FlgJ signature 74 96 5.8E-180 T 09-03-2017 RG43_RS15165 f3f39c8216d642b13227d2a5f2dc6908 313 PRINTS PR01002 Flagellar protein FlgJ signature 147 170 5.8E-180 T 09-03-2017 RG43_RS15165 f3f39c8216d642b13227d2a5f2dc6908 313 PRINTS PR01002 Flagellar protein FlgJ signature 277 295 5.8E-180 T 09-03-2017 RG43_RS15165 f3f39c8216d642b13227d2a5f2dc6908 313 PRINTS PR01002 Flagellar protein FlgJ signature 6 26 5.8E-180 T 09-03-2017 RG43_RS15165 f3f39c8216d642b13227d2a5f2dc6908 313 PRINTS PR01002 Flagellar protein FlgJ signature 53 73 5.8E-180 T 09-03-2017 RG43_RS15165 f3f39c8216d642b13227d2a5f2dc6908 313 PRINTS PR01002 Flagellar protein FlgJ signature 235 256 5.8E-180 T 09-03-2017 RG43_RS15165 f3f39c8216d642b13227d2a5f2dc6908 313 PRINTS PR01002 Flagellar protein FlgJ signature 171 189 5.8E-180 T 09-03-2017 RG43_RS08980 92a7e3f825ce9c42ea636316c2a01d37 232 SUPERFAMILY SSF51206 17 138 1.02E-19 T 09-03-2017 IPR018490 Cyclic nucleotide-binding-like RG43_RS08980 92a7e3f825ce9c42ea636316c2a01d37 232 SMART SM00100 15 133 1.6E-16 T 09-03-2017 IPR000595 Cyclic nucleotide-binding domain RG43_RS08980 92a7e3f825ce9c42ea636316c2a01d37 232 Gene3D G3DSA:2.60.120.10 19 139 7.5E-18 T 09-03-2017 IPR014710 RmlC-like jelly roll fold RG43_RS08980 92a7e3f825ce9c42ea636316c2a01d37 232 Pfam PF00027 Cyclic nucleotide-binding domain 35 118 1.5E-11 T 09-03-2017 IPR000595 Cyclic nucleotide-binding domain RG43_RS19150 27dc8fce39de738dddbfdadf099b48f7 283 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 7 272 2.8E-67 T 09-03-2017 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 RG43_RS19150 27dc8fce39de738dddbfdadf099b48f7 283 SUPERFAMILY SSF51197 5 281 9.62E-100 T 09-03-2017 RG43_RS19150 27dc8fce39de738dddbfdadf099b48f7 283 Gene3D G3DSA:3.60.130.10 2 281 1.7E-102 T 09-03-2017 RG43_RS10760 0da58dc137edd4e1935cd596c73e4d5e 183 Pfam PF01161 Phosphatidylethanolamine-binding protein 44 180 7.4E-37 T 09-03-2017 IPR008914 Phosphatidylethanolamine-binding protein RG43_RS10760 0da58dc137edd4e1935cd596c73e4d5e 183 SUPERFAMILY SSF49777 22 181 3.92E-54 T 09-03-2017 IPR008914 Phosphatidylethanolamine-binding protein RG43_RS10760 0da58dc137edd4e1935cd596c73e4d5e 183 Gene3D G3DSA:3.90.280.10 21 181 3.5E-58 T 09-03-2017 IPR008914 Phosphatidylethanolamine-binding protein RG43_RS10760 0da58dc137edd4e1935cd596c73e4d5e 183 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 39 180 4.4E-55 T 09-03-2017 IPR005247 YbhB/YbcL RG43_RS00445 965570e47da207d9a35e9e795928db65 321 ProSitePatterns PS01125 ROK family signature. 142 169 - T 09-03-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 RG43_RS00445 965570e47da207d9a35e9e795928db65 321 SUPERFAMILY SSF53067 12 311 1.45E-61 T 09-03-2017 RG43_RS00445 965570e47da207d9a35e9e795928db65 321 Gene3D G3DSA:3.30.420.40 12 143 9.8E-38 T 09-03-2017 RG43_RS00445 965570e47da207d9a35e9e795928db65 321 Pfam PF00480 ROK family 14 310 2.4E-72 T 09-03-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 RG43_RS00445 965570e47da207d9a35e9e795928db65 321 Gene3D G3DSA:3.30.420.40 144 292 5.2E-43 T 09-03-2017 RG43_RS09440 8a5f1f3ff7bbcff50cac232762b0bc13 467 SUPERFAMILY SSF158472 188 236 2.88E-9 T 09-03-2017 RG43_RS09440 8a5f1f3ff7bbcff50cac232762b0bc13 467 Gene3D G3DSA:1.10.287.130 232 290 3.5E-16 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS09440 8a5f1f3ff7bbcff50cac232762b0bc13 467 Gene3D G3DSA:3.30.565.10 291 461 7.4E-39 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS09440 8a5f1f3ff7bbcff50cac232762b0bc13 467 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 349 460 7.8E-20 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS09440 8a5f1f3ff7bbcff50cac232762b0bc13 467 SMART SM00304 187 239 6.1E-14 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RG43_RS09440 8a5f1f3ff7bbcff50cac232762b0bc13 467 SMART SM00387 349 461 9.0E-36 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS09440 8a5f1f3ff7bbcff50cac232762b0bc13 467 Pfam PF00672 HAMP domain 168 235 8.5E-17 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RG43_RS09440 8a5f1f3ff7bbcff50cac232762b0bc13 467 SUPERFAMILY SSF47384 223 304 5.89E-15 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS09440 8a5f1f3ff7bbcff50cac232762b0bc13 467 SUPERFAMILY SSF55874 293 459 3.14E-40 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS09440 8a5f1f3ff7bbcff50cac232762b0bc13 467 Pfam PF00512 His Kinase A (phospho-acceptor) domain 240 304 3.5E-13 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS09440 8a5f1f3ff7bbcff50cac232762b0bc13 467 SMART SM00388 240 304 3.0E-16 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS09440 8a5f1f3ff7bbcff50cac232762b0bc13 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 458 2.6E-12 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS09440 8a5f1f3ff7bbcff50cac232762b0bc13 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 414 2.6E-12 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS09440 8a5f1f3ff7bbcff50cac232762b0bc13 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 400 2.6E-12 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS09440 8a5f1f3ff7bbcff50cac232762b0bc13 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 439 2.6E-12 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS00765 c70e50eee90c525cc0d59b1853f664b0 463 Pfam PF03841 L-seryl-tRNA selenium transferase 83 451 3.0E-181 T 09-03-2017 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 RG43_RS00765 c70e50eee90c525cc0d59b1853f664b0 463 SUPERFAMILY SSF53383 74 462 3.5E-50 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS00765 c70e50eee90c525cc0d59b1853f664b0 463 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 10 460 6.5E-191 T 09-03-2017 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 RG43_RS00765 c70e50eee90c525cc0d59b1853f664b0 463 Gene3D G3DSA:3.40.640.10 78 321 1.0E-30 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS00765 c70e50eee90c525cc0d59b1853f664b0 463 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 463 257.7 T 09-03-2017 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 RG43_RS00765 c70e50eee90c525cc0d59b1853f664b0 463 Pfam PF12390 Selenocysteine synthase N terminal 9 48 2.1E-9 T 09-03-2017 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 RG43_RS02825 33e7dc7d11d7b539319895ea6c933e23 142 PIRSF PIRSF002181 1 142 5.9E-51 T 09-03-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RG43_RS02825 33e7dc7d11d7b539319895ea6c933e23 142 Gene3D G3DSA:3.90.1180.10 3 141 3.4E-65 T 09-03-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RG43_RS02825 33e7dc7d11d7b539319895ea6c933e23 142 SUPERFAMILY SSF52161 1 140 1.83E-60 T 09-03-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RG43_RS02825 33e7dc7d11d7b539319895ea6c933e23 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 09-03-2017 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 RG43_RS02825 33e7dc7d11d7b539319895ea6c933e23 142 Pfam PF00572 Ribosomal protein L13 15 138 6.2E-57 T 09-03-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RG43_RS02825 33e7dc7d11d7b539319895ea6c933e23 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 5.6E-68 T 09-03-2017 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS02825 33e7dc7d11d7b539319895ea6c933e23 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.455 T 09-03-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RG43_RS05885 21ebb915c0bcd518089ccb2a55571df1 109 SUPERFAMILY SSF158452 1 107 8.24E-37 T 09-03-2017 IPR023376 YqcC-like domain RG43_RS05885 21ebb915c0bcd518089ccb2a55571df1 109 Gene3D G3DSA:1.20.1440.40 1 104 4.3E-42 T 09-03-2017 IPR023376 YqcC-like domain RG43_RS05885 21ebb915c0bcd518089ccb2a55571df1 109 Pfam PF04287 tRNA pseudouridine synthase C 7 103 1.3E-33 T 09-03-2017 IPR023376 YqcC-like domain RG43_RS05885 21ebb915c0bcd518089ccb2a55571df1 109 PIRSF PIRSF006257 1 108 1.1E-41 T 09-03-2017 IPR007384 Protein of unknown function UCP006257 RG43_RS23945 97dd67b940c790b01abcb64aa6bcf9af 257 Hamap MF_00082_B Acetylglutamate kinase [argB]. 1 257 25.925 T 09-03-2017 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 RG43_RS23945 97dd67b940c790b01abcb64aa6bcf9af 257 PIRSF PIRSF000728 1 257 2.6E-74 T 09-03-2017 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 RG43_RS23945 97dd67b940c790b01abcb64aa6bcf9af 257 Pfam PF00696 Amino acid kinase family 4 234 8.5E-39 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase RG43_RS23945 97dd67b940c790b01abcb64aa6bcf9af 257 SUPERFAMILY SSF53633 2 255 7.59E-62 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase RG43_RS23945 97dd67b940c790b01abcb64aa6bcf9af 257 Gene3D G3DSA:3.40.1160.10 2 256 1.1E-79 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase RG43_RS23945 97dd67b940c790b01abcb64aa6bcf9af 257 TIGRFAM TIGR00761 argB: acetylglutamate kinase 4 233 1.6E-78 T 09-03-2017 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 RG43_RS19635 07b5d92be461364856283fc5891078fb 841 Pfam PF15976 CS1-pili formation C-terminal 732 824 4.0E-28 T 09-03-2017 IPR031917 Pilus assembly protein, C-terminal domain RG43_RS19635 07b5d92be461364856283fc5891078fb 841 SUPERFAMILY SSF49464 749 810 1.96E-5 T 09-03-2017 IPR008969 Carboxypeptidase-like, regulatory domain RG43_RS19635 07b5d92be461364856283fc5891078fb 841 Gene3D G3DSA:2.60.40.1120 749 813 8.3E-5 T 09-03-2017 IPR014766 Carboxypeptidase, regulatory domain RG43_RS19635 07b5d92be461364856283fc5891078fb 841 Pfam PF16967 Fimbrial, FimD or usher-like 283 350 1.3E-24 T 09-03-2017 IPR032636 Pilus assembly protein domain RG43_RS02075 f2f14e0af1c197103f5ae5ff7fa7701b 292 SUPERFAMILY SSF51556 3 291 1.32E-96 T 09-03-2017 IPR032466 Metal-dependent hydrolase RG43_RS02075 f2f14e0af1c197103f5ae5ff7fa7701b 292 Gene3D G3DSA:3.20.20.140 2 292 1.5E-111 T 09-03-2017 RG43_RS02075 f2f14e0af1c197103f5ae5ff7fa7701b 292 PIRSF PIRSF016839 1 292 4.1E-132 T 09-03-2017 RG43_RS02075 f2f14e0af1c197103f5ae5ff7fa7701b 292 ProSitePatterns PS01322 Phosphotriesterase family signature 1. 7 15 - T 09-03-2017 IPR017947 Aryldialkylphosphatase, zinc-binding site GO:0008270|GO:0009056|GO:0016788 RG43_RS02075 f2f14e0af1c197103f5ae5ff7fa7701b 292 Pfam PF02126 Phosphotriesterase family 1 292 3.9E-140 T 09-03-2017 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 RG43_RS20030 fa014f295e02a5010dd56ef861226cb6 414 Gene3D G3DSA:3.40.50.1820 346 412 7.4E-27 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS20030 fa014f295e02a5010dd56ef861226cb6 414 Gene3D G3DSA:3.40.50.1820 157 301 7.4E-27 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS20030 fa014f295e02a5010dd56ef861226cb6 414 Hamap MF_01063 Esterase FrsA [frsA]. 1 414 65.079 T 09-03-2017 IPR010520 UPF0255 family RG43_RS20030 fa014f295e02a5010dd56ef861226cb6 414 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 1 414 2.3E-221 T 09-03-2017 IPR010520 UPF0255 family RG43_RS20030 fa014f295e02a5010dd56ef861226cb6 414 SUPERFAMILY SSF53474 46 413 2.97E-54 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS05295 34b09452eb28106e216dccd5389dd976 135 Pfam PF07254 Membrane-bound toxin component of toxin-antitoxin system 2 129 7.3E-56 T 09-03-2017 IPR009883 Toxin CptA RG43_RS05295 34b09452eb28106e216dccd5389dd976 135 PIRSF PIRSF020653 1 135 6.2E-79 T 09-03-2017 IPR009883 Toxin CptA RG43_RS05295 34b09452eb28106e216dccd5389dd976 135 ProDom PD083358 MEMBRANE YGFX INNER SIMILAR ECS3768 Y3281 ESCHERICHIA TRANSMEMBRANE YPO0896A STY3202 19 131 3.0E-58 T 09-03-2017 IPR009883 Toxin CptA RG43_RS22315 6dce545efd3bad72b609138fd3a8b0fe 332 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 268 280 - T 09-03-2017 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 RG43_RS22315 6dce545efd3bad72b609138fd3a8b0fe 332 PIRSF PIRSF000904 1 331 2.2E-120 T 09-03-2017 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 RG43_RS22315 6dce545efd3bad72b609138fd3a8b0fe 332 PIRSF PIRSF500210 1 330 4.1E-124 T 09-03-2017 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 RG43_RS22315 6dce545efd3bad72b609138fd3a8b0fe 332 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 2 328 41.949 T 09-03-2017 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 RG43_RS22315 6dce545efd3bad72b609138fd3a8b0fe 332 SUPERFAMILY SSF56655 2 326 1.13E-111 T 09-03-2017 RG43_RS22315 6dce545efd3bad72b609138fd3a8b0fe 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 177 200 1.4E-70 T 09-03-2017 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 RG43_RS22315 6dce545efd3bad72b609138fd3a8b0fe 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 27 54 1.4E-70 T 09-03-2017 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 RG43_RS22315 6dce545efd3bad72b609138fd3a8b0fe 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 302 327 1.4E-70 T 09-03-2017 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 RG43_RS22315 6dce545efd3bad72b609138fd3a8b0fe 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 146 169 1.4E-70 T 09-03-2017 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 RG43_RS22315 6dce545efd3bad72b609138fd3a8b0fe 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 203 230 1.4E-70 T 09-03-2017 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 RG43_RS22315 6dce545efd3bad72b609138fd3a8b0fe 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 64 90 1.4E-70 T 09-03-2017 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 RG43_RS22315 6dce545efd3bad72b609138fd3a8b0fe 332 Gene3D G3DSA:3.30.540.10 2 192 1.7E-78 T 09-03-2017 RG43_RS22315 6dce545efd3bad72b609138fd3a8b0fe 332 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 3 192 2.2E-83 T 09-03-2017 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 RG43_RS22315 6dce545efd3bad72b609138fd3a8b0fe 332 Gene3D G3DSA:3.40.190.80 194 327 3.0E-57 T 09-03-2017 RG43_RS05870 4b1a461b5056010940c23faf67f24d91 282 Gene3D G3DSA:3.30.1130.10 145 282 1.7E-56 T 09-03-2017 RG43_RS05870 4b1a461b5056010940c23faf67f24d91 282 PIRSF PIRSF004750 6 282 2.8E-132 T 09-03-2017 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 RG43_RS05870 4b1a461b5056010940c23faf67f24d91 282 Pfam PF14489 QueF-like protein 196 270 2.5E-27 T 09-03-2017 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 RG43_RS05870 4b1a461b5056010940c23faf67f24d91 282 TIGRFAM TIGR03138 QueF: queuine synthase 11 282 2.4E-131 T 09-03-2017 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 RG43_RS05870 4b1a461b5056010940c23faf67f24d91 282 SUPERFAMILY SSF55620 186 268 1.04E-10 T 09-03-2017 RG43_RS05870 4b1a461b5056010940c23faf67f24d91 282 Gene3D G3DSA:3.30.1130.10 21 138 1.5E-45 T 09-03-2017 RG43_RS05870 4b1a461b5056010940c23faf67f24d91 282 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 131 3.4E-50 T 09-03-2017 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 RG43_RS05870 4b1a461b5056010940c23faf67f24d91 282 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 282 169.617 T 09-03-2017 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 RG43_RS20550 78921246262a5771174ba4db0353b5ec 66 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 66 27.209 T 09-03-2017 IPR009624 Uncharacterised protein family UPF0253 RG43_RS20550 78921246262a5771174ba4db0353b5ec 66 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 1 66 5.0E-27 T 09-03-2017 IPR009624 Uncharacterised protein family UPF0253 RG43_RS20550 78921246262a5771174ba4db0353b5ec 66 Pfam PF06786 Uncharacterised protein family (UPF0253) 2 65 3.4E-34 T 09-03-2017 IPR009624 Uncharacterised protein family UPF0253 RG43_RS13405 fff19f59ae16b1480094bfc8b88d33da 58 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 5 57 1.8E-8 T 09-03-2017 IPR012933 HicA mRNA interferase family GO:0003729 RG43_RS13405 fff19f59ae16b1480094bfc8b88d33da 58 SUPERFAMILY SSF54786 2 58 1.77E-9 T 09-03-2017 RG43_RS13405 fff19f59ae16b1480094bfc8b88d33da 58 Gene3D G3DSA:3.30.920.30 1 58 1.4E-8 T 09-03-2017 RG43_RS23350 f14e47f42890f2700511952dfa4945a5 118 SUPERFAMILY SSF142906 1 116 1.14E-34 T 09-03-2017 RG43_RS23350 f14e47f42890f2700511952dfa4945a5 118 Pfam PF04237 YjbR 12 101 1.2E-17 T 09-03-2017 IPR007351 Uncharacterised protein YjbR RG43_RS13370 c9aa760ca8c8854a30563c335737119f 474 Gene3D G3DSA:3.40.605.10 2 258 1.4E-96 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RG43_RS13370 c9aa760ca8c8854a30563c335737119f 474 Gene3D G3DSA:3.40.309.10 259 437 2.0E-60 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RG43_RS13370 c9aa760ca8c8854a30563c335737119f 474 Pfam PF00171 Aldehyde dehydrogenase family 13 470 2.1E-165 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RG43_RS13370 c9aa760ca8c8854a30563c335737119f 474 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 245 252 - T 09-03-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RG43_RS13370 c9aa760ca8c8854a30563c335737119f 474 SUPERFAMILY SSF53720 2 473 4.97E-157 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RG43_RS13370 c9aa760ca8c8854a30563c335737119f 474 TIGRFAM TIGR03374 ABALDH: 1-pyrroline dehydrogenase 2 473 0.0 T 09-03-2017 IPR017749 1-pyrroline dehydrogenase GO:0009447|GO:0019145|GO:0051287|GO:0055114 KEGG: 00330+1.2.1.19|KEGG: 00410+1.2.1.19|MetaCyc: PWY-2|MetaCyc: PWY-3 RG43_RS13370 c9aa760ca8c8854a30563c335737119f 474 Hamap MF_01275 Gamma-aminobutyraldehyde dehydrogenase [prr]. 1 474 88.885 T 09-03-2017 IPR017749 1-pyrroline dehydrogenase GO:0009447|GO:0019145|GO:0051287|GO:0055114 KEGG: 00330+1.2.1.19|KEGG: 00410+1.2.1.19|MetaCyc: PWY-2|MetaCyc: PWY-3 RG43_RS04685 16c23671310850035c45ee3adcefc78f 237 Pfam PF04986 Putative transposase 43 133 2.4E-32 T 09-03-2017 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 RG43_RS05640 430e0bb5486f8ffd8ea0a496e551422b 391 Pfam PF00155 Aminotransferase class I and II 29 372 3.4E-44 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RG43_RS05640 430e0bb5486f8ffd8ea0a496e551422b 391 Gene3D G3DSA:3.40.640.10 43 251 8.0E-50 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS05640 430e0bb5486f8ffd8ea0a496e551422b 391 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 4 384 1.4E-109 T 09-03-2017 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 RG43_RS05640 430e0bb5486f8ffd8ea0a496e551422b 391 Gene3D G3DSA:3.90.1150.10 252 385 3.4E-32 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RG43_RS05640 430e0bb5486f8ffd8ea0a496e551422b 391 SUPERFAMILY SSF53383 3 386 3.26E-86 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS02740 b96efb474059a42b2d95c3386f11e1c2 162 Pfam PF04093 rod shape-determining protein MreD 5 155 1.7E-46 T 09-03-2017 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 RG43_RS02740 b96efb474059a42b2d95c3386f11e1c2 162 PIRSF PIRSF018472 2 162 1.3E-57 T 09-03-2017 IPR026034 Cell shape-determining protein MreD, proteobacterial type RG43_RS02740 b96efb474059a42b2d95c3386f11e1c2 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 9 154 5.6E-42 T 09-03-2017 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 RG43_RS26895 a11e504f7e35970363640ce0bf874d04 272 Pfam PF06067 Domain of unknown function (DUF932) 37 261 9.5E-52 T 09-03-2017 IPR026325 Protein of unknown function DUF932 RG43_RS04515 a11e504f7e35970363640ce0bf874d04 272 Pfam PF06067 Domain of unknown function (DUF932) 37 261 9.5E-52 T 09-03-2017 IPR026325 Protein of unknown function DUF932 RG43_RS14305 162d3fc9d48c10df03fe3c9fa8defa57 337 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS14305 162d3fc9d48c10df03fe3c9fa8defa57 337 SUPERFAMILY SSF52540 49 316 4.22E-69 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS14305 162d3fc9d48c10df03fe3c9fa8defa57 337 Gene3D G3DSA:3.40.50.300 13 276 8.1E-74 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS14305 162d3fc9d48c10df03fe3c9fa8defa57 337 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 248 330 7.4E-25 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RG43_RS14305 162d3fc9d48c10df03fe3c9fa8defa57 337 Pfam PF00005 ABC transporter 40 196 5.8E-28 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS14305 162d3fc9d48c10df03fe3c9fa8defa57 337 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 248 312 2.1E-20 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RG43_RS14305 162d3fc9d48c10df03fe3c9fa8defa57 337 SMART SM00382 48 254 2.1E-14 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS18000 e0f1cc85c9d62b640c6184fbf68bd83e 98 ProDom PD015389 LYASE CITRATE ACYL CARRIER GAMMA CHAIN CITD PRECURSOR SIGNAL DIRECT 1 74 2.0E-36 T 09-03-2017 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 RG43_RS18000 e0f1cc85c9d62b640c6184fbf68bd83e 98 Hamap MF_00805 Citrate lyase acyl carrier protein [citD]. 1 97 26.922 T 09-03-2017 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 RG43_RS18000 e0f1cc85c9d62b640c6184fbf68bd83e 98 PIRSF PIRSF002736 1 97 3.0E-38 T 09-03-2017 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 RG43_RS18000 e0f1cc85c9d62b640c6184fbf68bd83e 98 TIGRFAM TIGR01608 citD: citrate lyase acyl carrier protein 1 94 1.8E-29 T 09-03-2017 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 RG43_RS18000 e0f1cc85c9d62b640c6184fbf68bd83e 98 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 5 86 8.2E-29 T 09-03-2017 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein RG43_RS16910 ccd8ba1d32b981d38dc1f16c4820d8c6 341 Pfam PF03864 Phage major capsid protein E 4 338 1.9E-70 T 09-03-2017 IPR005564 Major capsid protein GpE GO:0019028 RG43_RS16910 ccd8ba1d32b981d38dc1f16c4820d8c6 341 Gene3D G3DSA:3.15.30.10 1 155 6.2E-93 T 09-03-2017 RG43_RS16910 ccd8ba1d32b981d38dc1f16c4820d8c6 341 Gene3D G3DSA:3.15.30.10 286 330 6.2E-93 T 09-03-2017 RG43_RS16910 ccd8ba1d32b981d38dc1f16c4820d8c6 341 Gene3D G3DSA:3.30.1930.10 156 285 2.2E-61 T 09-03-2017 RG43_RS01975 111f0739b7325b956fce7925fad66fd4 711 ProDom PD147088 MEMBRANE INNER TRANSMEMBRANE IGAA HOMOLOG DEHYDROGENASE GROWTH ATTENUATOR INTRACELLULAR GENOME 3 697 0.0 T 09-03-2017 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 RG43_RS01975 111f0739b7325b956fce7925fad66fd4 711 Pfam PF07095 Intracellular growth attenuator protein IgaA 1 703 0.0 T 09-03-2017 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 RG43_RS10485 4196fb2ef365abcd2e1409af3ee7269c 1075 Pfam PF06120 Tail length tape measure protein 395 689 5.0E-101 T 09-03-2017 IPR009302 Tail length tape measure RG43_RS10485 4196fb2ef365abcd2e1409af3ee7269c 1075 TIGRFAM TIGR01541 tape_meas_lam_C: phage tail tape measure protein, lambda family 724 1038 2.0E-65 T 09-03-2017 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal RG43_RS10485 4196fb2ef365abcd2e1409af3ee7269c 1075 Pfam PF09718 Lambda phage tail tape-measure protein (Tape_meas_lam_C) 861 932 7.7E-15 T 09-03-2017 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal RG43_RS10485 4196fb2ef365abcd2e1409af3ee7269c 1075 TIGRFAM TIGR02675 tape_meas_nterm: tape measure domain 158 231 7.6E-24 T 09-03-2017 IPR013491 Caudovirus, tape measure, N-terminal RG43_RS12405 277b86a5f1b386cbeb45bb95f680098f 199 SUPERFAMILY SSF48498 81 194 6.3E-23 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RG43_RS12405 277b86a5f1b386cbeb45bb95f680098f 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 54 2.4E-10 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RG43_RS12405 277b86a5f1b386cbeb45bb95f680098f 199 Pfam PF16925 Bacterial transcriptional repressor C-terminal 84 189 2.6E-10 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RG43_RS12405 277b86a5f1b386cbeb45bb95f680098f 199 Gene3D G3DSA:1.10.357.10 8 194 5.7E-37 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RG43_RS12405 277b86a5f1b386cbeb45bb95f680098f 199 SUPERFAMILY SSF46689 7 78 1.54E-15 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS26705 6d08693330f7d74ebd25e4bb262a6292 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 344 2.8E-54 T 09-03-2017 IPR005495 Permease LptG/LptF-related GO:0016021 RG43_RS26705 6d08693330f7d74ebd25e4bb262a6292 356 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 4 345 4.2E-96 T 09-03-2017 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 RG43_RS04330 6d08693330f7d74ebd25e4bb262a6292 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 344 2.8E-54 T 09-03-2017 IPR005495 Permease LptG/LptF-related GO:0016021 RG43_RS04330 6d08693330f7d74ebd25e4bb262a6292 356 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 4 345 4.2E-96 T 09-03-2017 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 RG43_RS14350 0b0bf4f1305f9216153bfac86a8062a8 302 SUPERFAMILY SSF53448 9 291 1.04E-62 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS14350 0b0bf4f1305f9216153bfac86a8062a8 302 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 8 275 2.8E-116 T 09-03-2017 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 RG43_RS14350 0b0bf4f1305f9216153bfac86a8062a8 302 Pfam PF00483 Nucleotidyl transferase 10 276 1.9E-25 T 09-03-2017 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 RG43_RS14350 0b0bf4f1305f9216153bfac86a8062a8 302 Gene3D G3DSA:3.90.550.10 9 281 1.3E-69 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS14340 8d2360447e17d2c6be00893f02fc1c4c 205 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 35.213 T 09-03-2017 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-73614 RG43_RS14340 8d2360447e17d2c6be00893f02fc1c4c 205 SUPERFAMILY SSF57716 142 189 1.57E-16 T 09-03-2017 RG43_RS14340 8d2360447e17d2c6be00893f02fc1c4c 205 Gene3D G3DSA:3.30.60.20 142 189 3.5E-20 T 09-03-2017 RG43_RS14340 8d2360447e17d2c6be00893f02fc1c4c 205 PIRSF PIRSF035805 1 199 2.5E-57 T 09-03-2017 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-73614 RG43_RS14340 8d2360447e17d2c6be00893f02fc1c4c 205 SUPERFAMILY SSF52540 1 141 1.44E-39 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS14340 8d2360447e17d2c6be00893f02fc1c4c 205 Pfam PF00265 Thymidine kinase 2 186 1.2E-67 T 09-03-2017 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-73614 RG43_RS14340 8d2360447e17d2c6be00893f02fc1c4c 205 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 09-03-2017 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-73614 RG43_RS05230 11e1d8245e2b527575eb233365f89e9b 192 SUPERFAMILY SSF101327 7 176 1.16E-54 T 09-03-2017 IPR011978 Uncharacterised protein family UPF0149 RG43_RS05230 11e1d8245e2b527575eb233365f89e9b 192 Pfam PF03695 Uncharacterised protein family (UPF0149) 12 176 5.6E-42 T 09-03-2017 IPR011978 Uncharacterised protein family UPF0149 RG43_RS05230 11e1d8245e2b527575eb233365f89e9b 192 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 6 190 37.197 T 09-03-2017 IPR011978 Uncharacterised protein family UPF0149 RG43_RS05230 11e1d8245e2b527575eb233365f89e9b 192 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 11 166 2.0E-14 T 09-03-2017 IPR011978 Uncharacterised protein family UPF0149 RG43_RS01580 3ed844d1b49fbe63afcfc819444fda72 352 TIGRFAM TIGR00439 ftsX: putative protein insertion permease FtsX 47 352 2.0E-161 T 09-03-2017 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 RG43_RS01580 3ed844d1b49fbe63afcfc819444fda72 352 PIRSF PIRSF003097 50 348 3.9E-110 T 09-03-2017 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 RG43_RS01580 3ed844d1b49fbe63afcfc819444fda72 352 Pfam PF02687 FtsX-like permease family 228 342 2.3E-11 T 09-03-2017 IPR003838 ABC transporter permease protein domain GO:0016020 RG43_RS16700 dc5696c432dd366b3ac893423ff3dd40 253 Gene3D G3DSA:3.60.10.10 3 251 6.6E-24 T 09-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase RG43_RS16700 dc5696c432dd366b3ac893423ff3dd40 253 SUPERFAMILY SSF56219 8 251 3.14E-54 T 09-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase RG43_RS16700 dc5696c432dd366b3ac893423ff3dd40 253 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 13 244 7.9E-22 T 09-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase RG43_RS02735 8228d7e366b2276f7bf5069d67ec76c3 367 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 284 6.8E-127 T 09-03-2017 IPR007221 Rod shape-determining protein MreC GO:0008360 RG43_RS02735 8228d7e366b2276f7bf5069d67ec76c3 367 Pfam PF04085 rod shape-determining protein MreC 123 269 4.8E-36 T 09-03-2017 IPR007221 Rod shape-determining protein MreC GO:0008360 RG43_RS23970 659c8cb41a413b75ad287ddb35e23e59 283 SMART SM00342 185 268 1.4E-30 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS23970 659c8cb41a413b75ad287ddb35e23e59 283 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 222 264 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RG43_RS23970 659c8cb41a413b75ad287ddb35e23e59 283 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 237 252 1.4E-5 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RG43_RS23970 659c8cb41a413b75ad287ddb35e23e59 283 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 252 268 1.4E-5 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RG43_RS23970 659c8cb41a413b75ad287ddb35e23e59 283 Gene3D G3DSA:1.10.10.60 222 274 9.9E-17 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS23970 659c8cb41a413b75ad287ddb35e23e59 283 Gene3D G3DSA:2.60.120.10 46 118 8.4E-4 T 09-03-2017 IPR014710 RmlC-like jelly roll fold RG43_RS23970 659c8cb41a413b75ad287ddb35e23e59 283 Pfam PF12833 Helix-turn-helix domain 191 270 3.4E-21 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS23970 659c8cb41a413b75ad287ddb35e23e59 283 Gene3D G3DSA:1.10.10.60 165 221 8.6E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS23970 659c8cb41a413b75ad287ddb35e23e59 283 SUPERFAMILY SSF46689 222 273 2.87E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS14840 23ece579f939e0f0363d9ecdb0857a2f 416 Gene3D G3DSA:3.40.718.10 10 416 4.0E-171 T 09-03-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 RG43_RS14840 23ece579f939e0f0363d9ecdb0857a2f 416 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 1 416 3.9E-242 T 09-03-2017 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 RG43_RS14840 23ece579f939e0f0363d9ecdb0857a2f 416 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 303 322 - T 09-03-2017 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 RG43_RS14840 23ece579f939e0f0363d9ecdb0857a2f 416 SUPERFAMILY SSF53659 3 416 6.34E-151 T 09-03-2017 RG43_RS14840 23ece579f939e0f0363d9ecdb0857a2f 416 SMART SM01329 28 412 1.9E-182 T 09-03-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 RG43_RS14840 23ece579f939e0f0363d9ecdb0857a2f 416 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 29 412 1.3E-117 T 09-03-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 RG43_RS08415 88ab105477881409fc3f0ed25492116b 323 Gene3D G3DSA:3.40.630.10 35 321 3.0E-45 T 09-03-2017 RG43_RS08415 88ab105477881409fc3f0ed25492116b 323 Pfam PF04389 Peptidase family M28 95 316 3.9E-23 T 09-03-2017 IPR007484 Peptidase M28 RG43_RS08415 88ab105477881409fc3f0ed25492116b 323 SUPERFAMILY SSF53187 247 320 3.14E-43 T 09-03-2017 RG43_RS08415 88ab105477881409fc3f0ed25492116b 323 SUPERFAMILY SSF53187 38 217 3.14E-43 T 09-03-2017 RG43_RS19185 d8e97a1bd3dd1ec4727126b3c70be333 174 SUPERFAMILY SSF51161 8 164 1.23E-27 T 09-03-2017 IPR011004 Trimeric LpxA-like RG43_RS19185 d8e97a1bd3dd1ec4727126b3c70be333 174 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 45 78 0.0026 T 09-03-2017 IPR001451 Hexapeptide repeat RG43_RS19185 d8e97a1bd3dd1ec4727126b3c70be333 174 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 10 43 1.7E-8 T 09-03-2017 IPR001451 Hexapeptide repeat RG43_RS19185 d8e97a1bd3dd1ec4727126b3c70be333 174 Gene3D G3DSA:2.160.10.10 8 162 3.5E-29 T 09-03-2017 RG43_RS22635 bf9857962d63f9a9d1c63b682285a5b6 141 SUPERFAMILY SSF46785 2 131 6.37E-34 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS22635 bf9857962d63f9a9d1c63b682285a5b6 141 Gene3D G3DSA:1.10.10.10 2 133 3.8E-40 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS22635 bf9857962d63f9a9d1c63b682285a5b6 141 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 2 128 2.8E-36 T 09-03-2017 IPR000944 Transcription regulator Rrf2-type RG43_RS22635 bf9857962d63f9a9d1c63b682285a5b6 141 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 09-03-2017 IPR030489 Transcription regulator Rrf2-type, conserved site RG43_RS22635 bf9857962d63f9a9d1c63b682285a5b6 141 Pfam PF02082 Transcriptional regulator 2 82 3.0E-24 T 09-03-2017 IPR000944 Transcription regulator Rrf2-type RG43_RS22635 bf9857962d63f9a9d1c63b682285a5b6 141 Hamap MF_01177 HTH-type transcriptional repressor NsrR [nsrR]. 1 141 45.136 T 09-03-2017 IPR023761 Transcriptional repressor HTH, NsrR GO:0045892 RG43_RS01620 554a163b69d424181e4b44949163b446 425 Pfam PF11862 Domain of unknown function (DUF3382) 6 103 5.3E-25 T 09-03-2017 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal RG43_RS01620 554a163b69d424181e4b44949163b446 425 Pfam PF02653 Branched-chain amino acid transport system / permease component 112 398 8.8E-60 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RG43_RS09295 9641f6d923dae443532403c53f88bb29 344 PIRSF PIRSF030811 1 344 6.1E-159 T 09-03-2017 IPR016959 Uncharacterised conserved protein UCP030811 RG43_RS09295 9641f6d923dae443532403c53f88bb29 344 SUPERFAMILY SSF49401 190 344 3.23E-5 T 09-03-2017 IPR008966 Adhesion domain RG43_RS09295 9641f6d923dae443532403c53f88bb29 344 Gene3D G3DSA:2.60.40.1090 189 344 1.1E-5 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS09295 9641f6d923dae443532403c53f88bb29 344 Pfam PF00419 Fimbrial protein 184 343 2.5E-13 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS01350 f90d9768af1e4cbc5b1d3b6db676293c 188 Pfam PF03843 Outer membrane lipoprotein Slp family 16 165 6.6E-44 T 09-03-2017 IPR004658 Outer membrane lipoprotein Slp GO:0019867 RG43_RS01350 f90d9768af1e4cbc5b1d3b6db676293c 188 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 2 183 6.0E-91 T 09-03-2017 IPR004658 Outer membrane lipoprotein Slp GO:0019867 RG43_RS01350 f90d9768af1e4cbc5b1d3b6db676293c 188 PIRSF PIRSF004982 1 184 3.5E-56 T 09-03-2017 IPR004658 Outer membrane lipoprotein Slp GO:0019867 RG43_RS19860 a077337e3d230fae639f42d20eb7a0cb 164 Pfam PF07278 Protein of unknown function (DUF1441) 10 151 7.7E-48 T 09-03-2017 IPR009901 Bacteriophage VT1-Sakai, H0025 RG43_RS06210 a71de6fc79dbdc44a0873b5245a4f845 114 Pfam PF11756 Nitrous oxide-stimulated promoter 4 106 4.4E-39 T 09-03-2017 IPR020483 Uncharacterised protein family YgbA RG43_RS06210 a71de6fc79dbdc44a0873b5245a4f845 114 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 1 97 3.0E-52 T 09-03-2017 IPR020483 Uncharacterised protein family YgbA RG43_RS17470 f4af2c638078fc4804c1f4333f0c1f52 310 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 1 310 9.1E-146 T 09-03-2017 IPR003778 Carboxyltransferase domain, subdomain A and B RG43_RS17470 f4af2c638078fc4804c1f4333f0c1f52 310 SMART SM00797 23 298 6.2E-149 T 09-03-2017 IPR003778 Carboxyltransferase domain, subdomain A and B RG43_RS17470 f4af2c638078fc4804c1f4333f0c1f52 310 Pfam PF02626 Allophanate hydrolase subunit 2 25 281 1.3E-92 T 09-03-2017 IPR003778 Carboxyltransferase domain, subdomain A and B RG43_RS17470 f4af2c638078fc4804c1f4333f0c1f52 310 Gene3D G3DSA:2.40.100.10 232 295 6.3E-4 T 09-03-2017 IPR029000 Cyclophilin-like domain RG43_RS17470 f4af2c638078fc4804c1f4333f0c1f52 310 SUPERFAMILY SSF50891 173 288 1.33E-11 T 09-03-2017 IPR029000 Cyclophilin-like domain RG43_RS07110 10c420e4c2843917e3d41ac917e9216d 246 SUPERFAMILY SSF75217 4 164 8.5E-40 T 09-03-2017 IPR029028 Alpha/beta knot methyltransferases RG43_RS07110 10c420e4c2843917e3d41ac917e9216d 246 Gene3D G3DSA:3.40.1280.10 4 171 1.8E-33 T 09-03-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RG43_RS07110 10c420e4c2843917e3d41ac917e9216d 246 PIRSF PIRSF004808 1 245 4.2E-81 T 09-03-2017 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 RG43_RS07110 10c420e4c2843917e3d41ac917e9216d 246 Pfam PF00588 SpoU rRNA Methylase family 5 154 1.2E-33 T 09-03-2017 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 RG43_RS07110 10c420e4c2843917e3d41ac917e9216d 246 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 241 3.3E-97 T 09-03-2017 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 RG43_RS23750 63137d25077a9bac1c1f95f1fc75ead3 256 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 42.964 T 09-03-2017 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 RG43_RS23750 63137d25077a9bac1c1f95f1fc75ead3 256 SUPERFAMILY SSF110399 1 235 6.93E-82 T 09-03-2017 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 RG43_RS23750 63137d25077a9bac1c1f95f1fc75ead3 256 Gene3D G3DSA:3.20.20.70 1 253 7.1E-65 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS23750 63137d25077a9bac1c1f95f1fc75ead3 256 Pfam PF05690 Thiazole biosynthesis protein ThiG 4 247 1.1E-110 T 09-03-2017 RG43_RS17860 0754593e315c348cebd3f7d40cdf821f 160 Pfam PF07295 Zinc-ribbon containing domain 14 157 3.5E-53 T 09-03-2017 IPR009912 Zinc-ribbon containing domain RG43_RS01210 a88a2ca2b6848975ad33a897707e60bc 440 Gene3D G3DSA:1.20.1250.20 13 232 9.1E-24 T 09-03-2017 RG43_RS01210 a88a2ca2b6848975ad33a897707e60bc 440 Gene3D G3DSA:1.20.1250.20 250 438 1.8E-16 T 09-03-2017 RG43_RS01210 a88a2ca2b6848975ad33a897707e60bc 440 Pfam PF00083 Sugar (and other) transporter 23 232 1.6E-24 T 09-03-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RG43_RS01210 a88a2ca2b6848975ad33a897707e60bc 440 Pfam PF07690 Major Facilitator Superfamily 283 435 2.7E-12 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS01210 a88a2ca2b6848975ad33a897707e60bc 440 ProSitePatterns PS00216 Sugar transport proteins signature 1. 308 325 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RG43_RS01210 a88a2ca2b6848975ad33a897707e60bc 440 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 30 425 2.5E-153 T 09-03-2017 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 RG43_RS01210 a88a2ca2b6848975ad33a897707e60bc 440 SUPERFAMILY SSF103473 19 439 2.09E-64 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS16635 71a004242fcd228f7df5e22728baad96 88 SUPERFAMILY SSF57716 39 72 2.71E-8 T 09-03-2017 RG43_RS16635 71a004242fcd228f7df5e22728baad96 88 PRINTS PR00618 DksA/TraR zinc finger signature 39 50 1.5E-6 T 09-03-2017 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria RG43_RS16635 71a004242fcd228f7df5e22728baad96 88 PRINTS PR00618 DksA/TraR zinc finger signature 51 63 1.5E-6 T 09-03-2017 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria RG43_RS16635 71a004242fcd228f7df5e22728baad96 88 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 39 63 - T 09-03-2017 IPR020458 Zinc finger, DksA/TraR C4-type conserved site RG43_RS16635 71a004242fcd228f7df5e22728baad96 88 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 9 67 9.4E-18 T 09-03-2017 IPR012783 Zinc finger, C4 DksA/TraR-type RG43_RS16635 71a004242fcd228f7df5e22728baad96 88 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 37 67 1.7E-12 T 09-03-2017 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 RG43_RS17395 fd8c9643325bacc730ef2556804f8f2a 238 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 111 3.0E-31 T 09-03-2017 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 RG43_RS17395 fd8c9643325bacc730ef2556804f8f2a 238 Gene3D G3DSA:3.10.20.30 1 106 1.6E-36 T 09-03-2017 IPR012675 Beta-grasp domain RG43_RS17395 fd8c9643325bacc730ef2556804f8f2a 238 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 7 230 2.9E-92 T 09-03-2017 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 RG43_RS17395 fd8c9643325bacc730ef2556804f8f2a 238 Gene3D G3DSA:1.10.1060.10 108 236 3.8E-46 T 09-03-2017 RG43_RS17395 fd8c9643325bacc730ef2556804f8f2a 238 SUPERFAMILY SSF54292 1 106 6.18E-30 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RG43_RS17395 fd8c9643325bacc730ef2556804f8f2a 238 SUPERFAMILY SSF46548 107 236 9.07E-40 T 09-03-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 RG43_RS17395 fd8c9643325bacc730ef2556804f8f2a 238 Pfam PF13534 4Fe-4S dicluster domain 148 221 1.0E-9 T 09-03-2017 RG43_RS17395 fd8c9643325bacc730ef2556804f8f2a 238 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS11790 cbc0abef560c0b57072af58bfcb4c78d 183 SUPERFAMILY SSF55469 1 168 9.68E-41 T 09-03-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 RG43_RS11790 cbc0abef560c0b57072af58bfcb4c78d 183 Pfam PF00881 Nitroreductase family 9 161 4.0E-27 T 09-03-2017 IPR029479 Nitroreductase Reactome: R-HSA-209968 RG43_RS11790 cbc0abef560c0b57072af58bfcb4c78d 183 PIRSF PIRSF000232 1 182 8.0E-71 T 09-03-2017 IPR026021 Putative NAD(P)H nitroreductase YdjA-like RG43_RS11790 cbc0abef560c0b57072af58bfcb4c78d 183 Gene3D G3DSA:3.40.109.10 1 168 1.6E-42 T 09-03-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 RG43_RS17035 8b8613907e49ba2e3aacf9017bab64cc 97 Pfam PF05269 Bacteriophage CII protein 1 91 2.7E-48 T 09-03-2017 IPR007933 Transcription activator CII GO:0003677|GO:0006355 RG43_RS17035 8b8613907e49ba2e3aacf9017bab64cc 97 SUPERFAMILY SSF47413 6 80 1.34E-25 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS17035 8b8613907e49ba2e3aacf9017bab64cc 97 Gene3D G3DSA:1.10.8.320 1 80 1.3E-40 T 09-03-2017 RG43_RS10680 45fad834b66d685706ad8d028ee6cb94 261 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 14 255 3.3E-82 T 09-03-2017 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 RG43_RS10680 45fad834b66d685706ad8d028ee6cb94 261 Pfam PF01311 Bacterial export proteins, family 1 14 246 9.9E-69 T 09-03-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 RG43_RS10680 45fad834b66d685706ad8d028ee6cb94 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 1.4E-33 T 09-03-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 RG43_RS10680 45fad834b66d685706ad8d028ee6cb94 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 1.4E-33 T 09-03-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 RG43_RS10680 45fad834b66d685706ad8d028ee6cb94 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 1.4E-33 T 09-03-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 RG43_RS10680 45fad834b66d685706ad8d028ee6cb94 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 1.4E-33 T 09-03-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 RG43_RS11370 31064f5e770b03f25ececcfcbfe7f608 220 Gene3D G3DSA:3.30.420.10 4 152 4.3E-38 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS11370 31064f5e770b03f25ececcfcbfe7f608 220 SMART SM00479 1 156 7.0E-40 T 09-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III RG43_RS11370 31064f5e770b03f25ececcfcbfe7f608 220 Pfam PF00929 Exonuclease 4 147 1.7E-14 T 09-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III RG43_RS11370 31064f5e770b03f25ececcfcbfe7f608 220 SUPERFAMILY SSF53098 4 183 1.87E-34 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS02150 256543f394f68d2675f7e75105b7ca9e 406 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 17 400 9.8E-150 T 09-03-2017 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 RG43_RS02150 256543f394f68d2675f7e75105b7ca9e 406 Gene3D G3DSA:3.40.640.10 60 289 1.3E-92 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS02150 256543f394f68d2675f7e75105b7ca9e 406 Gene3D G3DSA:3.90.1150.10 290 403 7.1E-36 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RG43_RS02150 256543f394f68d2675f7e75105b7ca9e 406 Pfam PF00202 Aminotransferase class-III 26 400 2.5E-142 T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RG43_RS02150 256543f394f68d2675f7e75105b7ca9e 406 SUPERFAMILY SSF53383 20 400 9.11E-127 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS02150 256543f394f68d2675f7e75105b7ca9e 406 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 223 260 - T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RG43_RS02150 256543f394f68d2675f7e75105b7ca9e 406 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 14 401 45.891 T 09-03-2017 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 RG43_RS02150 256543f394f68d2675f7e75105b7ca9e 406 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 8 404 3.5E-205 T 09-03-2017 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 RG43_RS06055 af50efd47d0790f229e9c21cc8a9eecc 178 TIGRFAM TIGR02548 casB_cse2: CRISPR type I-E/ECOLI-associated protein CasB/Cse2 12 170 5.6E-35 T 09-03-2017 IPR013382 CRISPR-associated protein Cse2 RG43_RS06055 af50efd47d0790f229e9c21cc8a9eecc 178 Pfam PF09485 CRISPR-associated protein Cse2 (CRISPR_cse2) 26 168 2.0E-21 T 09-03-2017 IPR013382 CRISPR-associated protein Cse2 RG43_RS03130 3bd4474276d81e34a5f41940e5023c8f 133 Gene3D G3DSA:3.30.300.20 1 107 9.5E-40 T 09-03-2017 IPR015946 K homology domain-like, alpha/beta RG43_RS03130 3bd4474276d81e34a5f41940e5023c8f 133 SUPERFAMILY SSF89919 2 107 4.97E-36 T 09-03-2017 IPR023799 Ribosome-binding factor A domain RG43_RS03130 3bd4474276d81e34a5f41940e5023c8f 133 ProSitePatterns PS01319 Ribosome-binding factor A signature. 79 100 - T 09-03-2017 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 RG43_RS03130 3bd4474276d81e34a5f41940e5023c8f 133 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 119 2.4E-45 T 09-03-2017 IPR000238 Ribosome-binding factor A GO:0006364 RG43_RS03130 3bd4474276d81e34a5f41940e5023c8f 133 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 120 23.311 T 09-03-2017 IPR000238 Ribosome-binding factor A GO:0006364 RG43_RS03130 3bd4474276d81e34a5f41940e5023c8f 133 Pfam PF02033 Ribosome-binding factor A 7 112 1.3E-32 T 09-03-2017 IPR000238 Ribosome-binding factor A GO:0006364 RG43_RS03130 3bd4474276d81e34a5f41940e5023c8f 133 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 100 9.0E-48 T 09-03-2017 IPR000238 Ribosome-binding factor A GO:0006364 RG43_RS14750 8f6c42cc6b1296c0f4b942a0f8f61dc2 94 Pfam PF13436 Glycine-zipper domain 5 41 0.027 T 09-03-2017 IPR025693 Glycine-zipper-containing OmpA-like membrane domain RG43_RS14750 8f6c42cc6b1296c0f4b942a0f8f61dc2 94 Pfam PF13488 Glycine zipper 54 93 2.0E-5 T 09-03-2017 RG43_RS17070 7f39e46c739b27552d57a15cb4e37044 89 Pfam PF06301 Bacteriophage lambda Kil protein 43 84 6.4E-27 T 09-03-2017 IPR010444 Bacteriophage lambda Kil RG43_RS02485 4363326f335edc2987d8e609b33aa633 127 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 27.022 T 09-03-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS02485 4363326f335edc2987d8e609b33aa633 127 SUPERFAMILY SSF64263 1 118 3.4E-51 T 09-03-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS02485 4363326f335edc2987d8e609b33aa633 127 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 09-03-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS02485 4363326f335edc2987d8e609b33aa633 127 Pfam PF01196 Ribosomal protein L17 20 116 1.2E-34 T 09-03-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS02485 4363326f335edc2987d8e609b33aa633 127 Gene3D G3DSA:3.90.1030.10 1 117 2.4E-51 T 09-03-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS02485 4363326f335edc2987d8e609b33aa633 127 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 6.7E-51 T 09-03-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS04025 8a71e21b21661f7c9eb43f3aa7ef494e 279 Gene3D G3DSA:3.40.50.1000 42 214 1.5E-9 T 09-03-2017 IPR023214 HAD-like domain RG43_RS04025 8a71e21b21661f7c9eb43f3aa7ef494e 279 Pfam PF11019 Protein of unknown function (DUF2608) 24 263 3.0E-58 T 09-03-2017 IPR022565 Protein of unknown function DUF2608 RG43_RS04025 8a71e21b21661f7c9eb43f3aa7ef494e 279 ProDom PD187055 MEMBRANE OUTER PRECURSOR SIGNAL EXPORTED CT371 CPN1072 CPN1073/CP0776/CPJ1073/CPB1118 CP0777 CPJ1072 33 227 1.0E-6 T 09-03-2017 RG43_RS04025 8a71e21b21661f7c9eb43f3aa7ef494e 279 SUPERFAMILY SSF56784 42 140 1.49E-8 T 09-03-2017 IPR023214 HAD-like domain RG43_RS04025 8a71e21b21661f7c9eb43f3aa7ef494e 279 SUPERFAMILY SSF56784 169 214 1.49E-8 T 09-03-2017 IPR023214 HAD-like domain RG43_RS26400 8a71e21b21661f7c9eb43f3aa7ef494e 279 Gene3D G3DSA:3.40.50.1000 42 214 1.5E-9 T 09-03-2017 IPR023214 HAD-like domain RG43_RS26400 8a71e21b21661f7c9eb43f3aa7ef494e 279 Pfam PF11019 Protein of unknown function (DUF2608) 24 263 3.0E-58 T 09-03-2017 IPR022565 Protein of unknown function DUF2608 RG43_RS26400 8a71e21b21661f7c9eb43f3aa7ef494e 279 ProDom PD187055 MEMBRANE OUTER PRECURSOR SIGNAL EXPORTED CT371 CPN1072 CPN1073/CP0776/CPJ1073/CPB1118 CP0777 CPJ1072 33 227 1.0E-6 T 09-03-2017 RG43_RS26400 8a71e21b21661f7c9eb43f3aa7ef494e 279 SUPERFAMILY SSF56784 42 140 1.49E-8 T 09-03-2017 IPR023214 HAD-like domain RG43_RS26400 8a71e21b21661f7c9eb43f3aa7ef494e 279 SUPERFAMILY SSF56784 169 214 1.49E-8 T 09-03-2017 IPR023214 HAD-like domain RG43_RS16595 23b8aa955e966f3380b21e304332387f 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 217 1.2E-25 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS16595 23b8aa955e966f3380b21e304332387f 219 Gene3D G3DSA:1.10.3720.10 13 217 4.4E-50 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS16595 23b8aa955e966f3380b21e304332387f 219 SUPERFAMILY SSF161098 13 202 4.71E-46 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS16595 23b8aa955e966f3380b21e304332387f 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 111 3.7E-32 T 09-03-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RG43_RS24025 ee33b1f96fbb9fc32c120416e947a427 301 Pfam PF00892 EamA-like transporter family 152 289 6.6E-26 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 RG43_RS24025 ee33b1f96fbb9fc32c120416e947a427 301 Pfam PF00892 EamA-like transporter family 13 141 1.1E-22 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 RG43_RS24025 ee33b1f96fbb9fc32c120416e947a427 301 SUPERFAMILY SSF103481 189 292 1.7E-16 T 09-03-2017 RG43_RS24025 ee33b1f96fbb9fc32c120416e947a427 301 SUPERFAMILY SSF103481 44 144 3.53E-14 T 09-03-2017 RG43_RS04165 a6f9f7c79ea9360ed3ea8c2bf7ff19b7 308 Pfam PF12883 Protein of unknown function (DUF3828) 25 143 1.5E-31 T 09-03-2017 IPR024289 Domain of unknown function DUF3828 RG43_RS04165 a6f9f7c79ea9360ed3ea8c2bf7ff19b7 308 Pfam PF12883 Protein of unknown function (DUF3828) 240 286 0.0016 T 09-03-2017 IPR024289 Domain of unknown function DUF3828 RG43_RS26540 a6f9f7c79ea9360ed3ea8c2bf7ff19b7 308 Pfam PF12883 Protein of unknown function (DUF3828) 25 143 1.5E-31 T 09-03-2017 IPR024289 Domain of unknown function DUF3828 RG43_RS26540 a6f9f7c79ea9360ed3ea8c2bf7ff19b7 308 Pfam PF12883 Protein of unknown function (DUF3828) 240 286 0.0016 T 09-03-2017 IPR024289 Domain of unknown function DUF3828 RG43_RS08315 1ec9edb944f55b4a454d107b10303734 216 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 181 1.9E-26 T 09-03-2017 IPR023214 HAD-like domain RG43_RS08315 1ec9edb944f55b4a454d107b10303734 216 Gene3D G3DSA:3.40.50.1000 63 213 7.5E-51 T 09-03-2017 IPR023214 HAD-like domain RG43_RS08315 1ec9edb944f55b4a454d107b10303734 216 SUPERFAMILY SSF56784 4 203 2.84E-47 T 09-03-2017 IPR023214 HAD-like domain RG43_RS08315 1ec9edb944f55b4a454d107b10303734 216 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 6 163 9.2E-6 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RG43_RS08315 1ec9edb944f55b4a454d107b10303734 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 3.6E-10 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RG43_RS08315 1ec9edb944f55b4a454d107b10303734 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 95 108 3.6E-10 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RG43_RS08315 1ec9edb944f55b4a454d107b10303734 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 125 141 3.6E-10 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RG43_RS08315 1ec9edb944f55b4a454d107b10303734 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 143 163 3.6E-10 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RG43_RS08315 1ec9edb944f55b4a454d107b10303734 216 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 6 181 1.2E-21 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RG43_RS08315 1ec9edb944f55b4a454d107b10303734 216 Gene3D G3DSA:1.10.150.240 19 62 8.5E-6 T 09-03-2017 IPR023198 Phosphoglycolate phosphatase, domain 2 RG43_RS18650 34b5c944e715eca6be20a730b6e6cc79 175 Pfam PF07445 Primosomal replication protein priC 9 173 1.3E-45 T 09-03-2017 IPR010890 Primosomal replication PriB/PriC RG43_RS00880 a602045be6602b08e6009d7fd91a4d7a 417 Gene3D G3DSA:3.40.640.10 61 266 1.1E-39 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS00880 a602045be6602b08e6009d7fd91a4d7a 417 Pfam PF00155 Aminotransferase class I and II 165 391 3.5E-21 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RG43_RS00880 a602045be6602b08e6009d7fd91a4d7a 417 Gene3D G3DSA:3.90.1150.10 267 410 1.3E-15 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RG43_RS00880 a602045be6602b08e6009d7fd91a4d7a 417 SUPERFAMILY SSF53383 26 411 1.93E-58 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS14845 02ae5257b7d6d50c0741e87f2fa8d4cc 217 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 45 217 2.0E-61 T 09-03-2017 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 RG43_RS14845 02ae5257b7d6d50c0741e87f2fa8d4cc 217 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 76 90 - T 09-03-2017 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 RG43_RS14845 02ae5257b7d6d50c0741e87f2fa8d4cc 217 SUPERFAMILY SSF55120 37 216 3.04E-43 T 09-03-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RG43_RS14845 02ae5257b7d6d50c0741e87f2fa8d4cc 217 Pfam PF00849 RNA pseudouridylate synthase 41 186 5.7E-13 T 09-03-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RG43_RS12130 805e1e78eef74fee5e015e93c7027f40 97 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 35 92 7.6E-5 T 09-03-2017 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 Reactome: R-HSA-611105 RG43_RS12130 805e1e78eef74fee5e015e93c7027f40 97 SUPERFAMILY SSF54862 42 92 2.28E-8 T 09-03-2017 RG43_RS12130 805e1e78eef74fee5e015e93c7027f40 97 Gene3D G3DSA:3.30.70.20 42 79 4.0E-6 T 09-03-2017 RG43_RS12130 805e1e78eef74fee5e015e93c7027f40 97 PIRSF PIRSF036548 3 97 1.4E-37 T 09-03-2017 IPR012206 Ferredoxin-like, FixX GO:0005506 RG43_RS05445 07ee7a2360f4e5b0f80beb548b7ebd75 292 SMART SM01092 181 283 1.7E-25 T 09-03-2017 IPR005107 CO dehydrogenase flavoprotein, C-terminal RG43_RS05445 07ee7a2360f4e5b0f80beb548b7ebd75 292 Gene3D G3DSA:3.30.43.10 6 56 2.7E-14 T 09-03-2017 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RG43_RS05445 07ee7a2360f4e5b0f80beb548b7ebd75 292 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 6 173 2.4E-51 T 09-03-2017 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 RG43_RS05445 07ee7a2360f4e5b0f80beb548b7ebd75 292 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 183 283 4.3E-24 T 09-03-2017 IPR005107 CO dehydrogenase flavoprotein, C-terminal RG43_RS05445 07ee7a2360f4e5b0f80beb548b7ebd75 292 SUPERFAMILY SSF56176 6 173 9.81E-52 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RG43_RS05445 07ee7a2360f4e5b0f80beb548b7ebd75 292 Gene3D G3DSA:3.30.465.10 57 173 2.1E-36 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RG43_RS05445 07ee7a2360f4e5b0f80beb548b7ebd75 292 SUPERFAMILY SSF55447 181 284 5.23E-25 T 09-03-2017 IPR005107 CO dehydrogenase flavoprotein, C-terminal RG43_RS05445 07ee7a2360f4e5b0f80beb548b7ebd75 292 Gene3D G3DSA:3.30.390.50 180 288 5.5E-29 T 09-03-2017 RG43_RS18900 f792f843489a16e4ed59b62de7af99a8 324 PRINTS PR00069 Aldo-keto reductase signature 142 159 1.0E-5 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RG43_RS18900 f792f843489a16e4ed59b62de7af99a8 324 PRINTS PR00069 Aldo-keto reductase signature 111 129 1.0E-5 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RG43_RS18900 f792f843489a16e4ed59b62de7af99a8 324 PRINTS PR00069 Aldo-keto reductase signature 230 254 1.0E-5 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RG43_RS18900 f792f843489a16e4ed59b62de7af99a8 324 PRINTS PR00069 Aldo-keto reductase signature 47 71 1.0E-5 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RG43_RS18900 f792f843489a16e4ed59b62de7af99a8 324 Pfam PF00248 Aldo/keto reductase family 15 312 1.5E-74 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain RG43_RS18900 f792f843489a16e4ed59b62de7af99a8 324 SUPERFAMILY SSF51430 1 321 1.83E-102 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain RG43_RS18900 f792f843489a16e4ed59b62de7af99a8 324 Gene3D G3DSA:3.20.20.100 9 322 5.6E-106 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain RG43_RS19090 1ed5f291446673d46887c6beff93346e 86 Hamap MF_01198 Anti-adapter protein IraP [iraP]. 1 86 26.833 T 09-03-2017 IPR019732 Sigma-S stabilisation anti-adaptor protein GO:0005737 RG43_RS19090 1ed5f291446673d46887c6beff93346e 86 Pfam PF10796 Sigma-S stabilisation anti-adaptor protein 1 85 7.4E-32 T 09-03-2017 IPR019732 Sigma-S stabilisation anti-adaptor protein GO:0005737 RG43_RS02330 afe9c362ce4ab8edb715b71083701843 654 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 34 608 2.5E-195 T 09-03-2017 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 RG43_RS02330 afe9c362ce4ab8edb715b71083701843 654 Pfam PF03958 Bacterial type II/III secretion system short domain 197 266 5.4E-17 T 09-03-2017 IPR005644 NolW-like RG43_RS02330 afe9c362ce4ab8edb715b71083701843 654 Pfam PF03958 Bacterial type II/III secretion system short domain 272 351 1.4E-15 T 09-03-2017 IPR005644 NolW-like RG43_RS02330 afe9c362ce4ab8edb715b71083701843 654 Pfam PF03958 Bacterial type II/III secretion system short domain 131 190 8.1E-11 T 09-03-2017 IPR005644 NolW-like RG43_RS02330 afe9c362ce4ab8edb715b71083701843 654 PRINTS PR00811 Bacterial general secretion pathway protein D signature 351 361 1.1E-42 T 09-03-2017 IPR001775 GspD/PilQ family RG43_RS02330 afe9c362ce4ab8edb715b71083701843 654 PRINTS PR00811 Bacterial general secretion pathway protein D signature 563 581 1.1E-42 T 09-03-2017 IPR001775 GspD/PilQ family RG43_RS02330 afe9c362ce4ab8edb715b71083701843 654 PRINTS PR00811 Bacterial general secretion pathway protein D signature 586 600 1.1E-42 T 09-03-2017 IPR001775 GspD/PilQ family RG43_RS02330 afe9c362ce4ab8edb715b71083701843 654 PRINTS PR00811 Bacterial general secretion pathway protein D signature 433 457 1.1E-42 T 09-03-2017 IPR001775 GspD/PilQ family RG43_RS02330 afe9c362ce4ab8edb715b71083701843 654 PRINTS PR00811 Bacterial general secretion pathway protein D signature 468 478 1.1E-42 T 09-03-2017 IPR001775 GspD/PilQ family RG43_RS02330 afe9c362ce4ab8edb715b71083701843 654 Pfam PF00263 Bacterial type II and III secretion system protein 437 599 2.1E-51 T 09-03-2017 IPR004846 Type II/III secretion system GO:0009306 RG43_RS02330 afe9c362ce4ab8edb715b71083701843 654 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 544 577 - T 09-03-2017 IPR004845 Type II secretion system GspD, conserved site GO:0008565 RG43_RS23035 cea4536fa2f10279de10e7598603e49d 292 Pfam PF13990 YjcZ-like protein 21 287 1.2E-136 T 09-03-2017 IPR025599 YjcZ-like protein RG43_RS21825 c4676c408919dc008e44deeebf6fd908 129 SUPERFAMILY SSF103473 6 124 2.49E-15 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS21825 c4676c408919dc008e44deeebf6fd908 129 Gene3D G3DSA:1.20.1250.20 6 123 2.4E-13 T 09-03-2017 RG43_RS02935 5bb437dfbbabba6e96122e3e5bd18614 284 PIRSF PIRSF005052 1 284 3.2E-114 T 09-03-2017 IPR005337 RapZ-like family GO:0005524 RG43_RS02935 5bb437dfbbabba6e96122e3e5bd18614 284 Pfam PF03668 P-loop ATPase protein family 1 282 2.6E-147 T 09-03-2017 IPR005337 RapZ-like family GO:0005524 RG43_RS02935 5bb437dfbbabba6e96122e3e5bd18614 284 Gene3D G3DSA:3.40.50.300 2 150 5.9E-13 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS02935 5bb437dfbbabba6e96122e3e5bd18614 284 SUPERFAMILY SSF52540 2 151 5.03E-13 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS02935 5bb437dfbbabba6e96122e3e5bd18614 284 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 281 41.009 T 09-03-2017 IPR005337 RapZ-like family GO:0005524 RG43_RS00095 03fd2fd6554d81b0570793a9cb8e8277 318 Pfam PF01032 FecCD transport family 14 316 2.0E-93 T 09-03-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 RG43_RS00095 03fd2fd6554d81b0570793a9cb8e8277 318 SUPERFAMILY SSF81345 3 316 1.44E-79 T 09-03-2017 IPR029022 ABC transporter, BtuC-like RG43_RS00095 03fd2fd6554d81b0570793a9cb8e8277 318 Gene3D G3DSA:1.10.3470.10 3 318 1.4E-98 T 09-03-2017 IPR029022 ABC transporter, BtuC-like RG43_RS15045 f018152bd836a4544932e2ac2f3a70b3 269 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 202 - T 09-03-2017 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: R-HSA-70895 RG43_RS15045 f018152bd836a4544932e2ac2f3a70b3 269 Gene3D G3DSA:3.20.10.10 123 262 1.3E-44 T 09-03-2017 RG43_RS15045 f018152bd836a4544932e2ac2f3a70b3 269 Gene3D G3DSA:3.30.470.10 1 106 4.6E-32 T 09-03-2017 RG43_RS15045 f018152bd836a4544932e2ac2f3a70b3 269 SUPERFAMILY SSF56752 2 264 9.94E-70 T 09-03-2017 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 RG43_RS15045 f018152bd836a4544932e2ac2f3a70b3 269 Pfam PF01063 Amino-transferase class IV 24 246 5.6E-48 T 09-03-2017 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 RG43_RS15045 f018152bd836a4544932e2ac2f3a70b3 269 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 262 8.0E-113 T 09-03-2017 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 RG43_RS16195 3cfca27767229b6aaa0738a6149bd45a 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 14 101 28.512 T 09-03-2017 IPR022935 ATP-dependent Clp protease adaptor protein ClpS RG43_RS16195 3cfca27767229b6aaa0738a6149bd45a 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 23 102 5.0E-34 T 09-03-2017 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 RG43_RS16195 3cfca27767229b6aaa0738a6149bd45a 106 SUPERFAMILY SSF54736 22 105 1.99E-33 T 09-03-2017 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RG43_RS16195 3cfca27767229b6aaa0738a6149bd45a 106 Gene3D G3DSA:3.30.1390.10 4 106 2.7E-45 T 09-03-2017 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RG43_RS19355 9a4b413c62704b5e257a9150e7955216 223 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 33 215 4.2E-70 T 09-03-2017 IPR004778 Homoserine/Threonine efflux protein GO:0016021 RG43_RS19355 9a4b413c62704b5e257a9150e7955216 223 Pfam PF01810 LysE type translocator 29 219 7.6E-56 T 09-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RG43_RS19355 9a4b413c62704b5e257a9150e7955216 223 PIRSF PIRSF006324 14 220 1.5E-53 T 09-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RG43_RS15265 46aeaec8f464c962863c5da2c65b296e 81 Pfam PF06183 DinI-like family 14 78 2.3E-28 T 09-03-2017 IPR010391 DNA damage-inducible protein DinI-like RG43_RS15265 46aeaec8f464c962863c5da2c65b296e 81 SUPERFAMILY SSF54857 1 80 5.75E-29 T 09-03-2017 IPR010391 DNA damage-inducible protein DinI-like RG43_RS15265 46aeaec8f464c962863c5da2c65b296e 81 Gene3D G3DSA:3.30.910.10 1 80 2.9E-36 T 09-03-2017 IPR010391 DNA damage-inducible protein DinI-like RG43_RS16045 3938c75e5359e31b2e6ab0d3a2f96c21 254 Pfam PF01435 Peptidase family M48 77 249 7.9E-27 T 09-03-2017 IPR001915 Peptidase M48 GO:0004222|GO:0006508 RG43_RS16045 3938c75e5359e31b2e6ab0d3a2f96c21 254 Gene3D G3DSA:3.30.2010.10 70 148 1.5E-21 T 09-03-2017 RG43_RS17705 a341c114d295970881c5f8bd92756313 108 Pfam PF13982 YbfN-like lipoprotein 20 107 9.6E-49 T 09-03-2017 IPR025727 YbfN-like lipoprotein RG43_RS16420 c5b508a66025b6eab2270b4869e2d6db 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 65 76 1.4E-18 T 09-03-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RG43_RS16420 c5b508a66025b6eab2270b4869e2d6db 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 151 164 1.4E-18 T 09-03-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RG43_RS16420 c5b508a66025b6eab2270b4869e2d6db 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 124 141 1.4E-18 T 09-03-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RG43_RS16420 c5b508a66025b6eab2270b4869e2d6db 400 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 285 376 1.4E-23 T 09-03-2017 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RG43_RS16420 c5b508a66025b6eab2270b4869e2d6db 400 Gene3D G3DSA:3.40.710.10 27 283 1.7E-98 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like RG43_RS16420 c5b508a66025b6eab2270b4869e2d6db 400 SUPERFAMILY SSF56601 13 285 4.17E-83 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like RG43_RS16420 c5b508a66025b6eab2270b4869e2d6db 400 SUPERFAMILY SSF69189 285 378 6.47E-25 T 09-03-2017 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RG43_RS16420 c5b508a66025b6eab2270b4869e2d6db 400 Gene3D G3DSA:2.60.410.10 285 376 2.7E-30 T 09-03-2017 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RG43_RS16420 c5b508a66025b6eab2270b4869e2d6db 400 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 30 266 3.5E-102 T 09-03-2017 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 RG43_RS16420 c5b508a66025b6eab2270b4869e2d6db 400 SMART SM00936 285 376 9.3E-35 T 09-03-2017 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RG43_RS13665 5945279733f5c56a3385ce6bb21553c2 457 Gene3D G3DSA:3.40.50.300 214 367 2.9E-47 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS13665 5945279733f5c56a3385ce6bb21553c2 457 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 09-03-2017 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site RG43_RS13665 5945279733f5c56a3385ce6bb21553c2 457 Hamap MF_00965 ATP-dependent RNA helicase DbpA [dbpA]. 5 457 71.675 T 09-03-2017 IPR028619 ATP-dependent RNA helicase DbpA GO:0000027|GO:0003724 RG43_RS13665 5945279733f5c56a3385ce6bb21553c2 457 Pfam PF00271 Helicase conserved C-terminal domain 231 336 1.6E-26 T 09-03-2017 IPR001650 Helicase, C-terminal RG43_RS13665 5945279733f5c56a3385ce6bb21553c2 457 SUPERFAMILY SSF52540 72 350 1.62E-69 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS13665 5945279733f5c56a3385ce6bb21553c2 457 Gene3D G3DSA:3.40.50.300 2 209 2.8E-71 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS13665 5945279733f5c56a3385ce6bb21553c2 457 SMART SM00487 22 219 1.2E-55 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain RG43_RS13665 5945279733f5c56a3385ce6bb21553c2 457 Pfam PF03880 DbpA RNA binding domain 384 454 1.3E-20 T 09-03-2017 IPR005580 DbpA, RNA-binding domain RG43_RS13665 5945279733f5c56a3385ce6bb21553c2 457 Pfam PF00270 DEAD/DEAH box helicase 27 191 3.4E-43 T 09-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RG43_RS13665 5945279733f5c56a3385ce6bb21553c2 457 SMART SM00490 255 336 4.9E-28 T 09-03-2017 IPR001650 Helicase, C-terminal RG43_RS17525 98eb194570ed69e61b2af843804f671a 378 Pfam PF01609 Transposase DDE domain 102 343 1.5E-30 T 09-03-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 RG43_RS17525 98eb194570ed69e61b2af843804f671a 378 Pfam PF13808 DDE_Tnp_1-associated 7 94 3.2E-31 T 09-03-2017 IPR032806 H repeat-associated protein, N-terminal RG43_RS26080 2d737a7d0a207deb96f08b98c39ead4a 186 SMART SM00945 68 182 8.8E-36 T 09-03-2017 IPR016103 ProQ/FinO domain RG43_RS26080 2d737a7d0a207deb96f08b98c39ead4a 186 Pfam PF12602 Fertility inhibition protein N terminal 1 62 3.5E-34 T 09-03-2017 IPR021065 Fertility inhibition protein FinO, N-terminal RG43_RS26080 2d737a7d0a207deb96f08b98c39ead4a 186 Pfam PF04352 ProQ/FINO family 74 176 2.0E-24 T 09-03-2017 IPR016103 ProQ/FinO domain RG43_RS26080 2d737a7d0a207deb96f08b98c39ead4a 186 SUPERFAMILY SSF48657 33 182 2.22E-45 T 09-03-2017 IPR016103 ProQ/FinO domain RG43_RS26080 2d737a7d0a207deb96f08b98c39ead4a 186 Gene3D G3DSA:1.10.1710.10 33 183 4.1E-64 T 09-03-2017 IPR016103 ProQ/FinO domain RG43_RS04690 e723e9df91d91080f3b1adc6e5e290a6 92 SUPERFAMILY SSF46785 6 66 1.91E-15 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS04690 e723e9df91d91080f3b1adc6e5e290a6 92 Pfam PF04703 FaeA-like protein 5 64 1.0E-29 T 09-03-2017 IPR006793 FaeA-like protein GO:0006355|GO:0009289 RG43_RS04690 e723e9df91d91080f3b1adc6e5e290a6 92 ProDom PD007170 TRANSCRIPTION REGULATORY REGULATION FIMBRIA FIMBRIAL PLASMID ACTIVATOR PAPI OPERON PEFI 5 61 8.0E-28 T 09-03-2017 IPR006793 FaeA-like protein GO:0006355|GO:0009289 RG43_RS04690 e723e9df91d91080f3b1adc6e5e290a6 92 Gene3D G3DSA:1.10.10.10 1 70 1.9E-28 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS12575 b2c1e30af19fa40e5767bc8668149a38 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 7.1E-18 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RG43_RS12575 b2c1e30af19fa40e5767bc8668149a38 196 SUPERFAMILY SSF48498 84 168 9.93E-12 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RG43_RS12575 b2c1e30af19fa40e5767bc8668149a38 196 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 59 - T 09-03-2017 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RG43_RS12575 b2c1e30af19fa40e5767bc8668149a38 196 SUPERFAMILY SSF46689 1 79 1.8E-19 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS12575 b2c1e30af19fa40e5767bc8668149a38 196 Gene3D G3DSA:1.10.357.10 5 192 1.7E-35 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RG43_RS12575 b2c1e30af19fa40e5767bc8668149a38 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 1.8E-11 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RG43_RS12575 b2c1e30af19fa40e5767bc8668149a38 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.8E-11 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RG43_RS09810 5bdd18bf78494f9b048affe9fb5ccb61 475 Pfam PF00929 Exonuclease 13 188 2.6E-31 T 09-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III RG43_RS09810 5bdd18bf78494f9b048affe9fb5ccb61 475 Gene3D G3DSA:3.30.420.10 2 201 5.6E-88 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS09810 5bdd18bf78494f9b048affe9fb5ccb61 475 SMART SM00479 10 203 0.0024 T 09-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III RG43_RS09810 5bdd18bf78494f9b048affe9fb5ccb61 475 SUPERFAMILY SSF53098 9 474 3.42E-136 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS09810 5bdd18bf78494f9b048affe9fb5ccb61 475 PIRSF PIRSF000977 3 475 1.7E-201 T 09-03-2017 IPR023607 Exodeoxyribonuclease I GO:0004529 RG43_RS09810 5bdd18bf78494f9b048affe9fb5ccb61 475 Pfam PF08411 Exonuclease C-terminal 212 472 4.1E-104 T 09-03-2017 IPR013620 Exonuclease C-terminal GO:0006281|GO:0008852 RG43_RS08325 b6ab0ea4e5d049b6c351164deb577815 199 SMART SM00471 26 151 1.6E-7 T 09-03-2017 IPR003607 HD/PDEase domain RG43_RS08325 b6ab0ea4e5d049b6c351164deb577815 199 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 3 195 43.794 T 09-03-2017 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 RG43_RS08325 b6ab0ea4e5d049b6c351164deb577815 199 SUPERFAMILY SSF109604 2 193 3.71E-45 T 09-03-2017 RG43_RS08325 b6ab0ea4e5d049b6c351164deb577815 199 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 80 172 4.0E-48 T 09-03-2017 RG43_RS08325 b6ab0ea4e5d049b6c351164deb577815 199 Gene3D G3DSA:1.10.3210.10 2 194 1.4E-53 T 09-03-2017 IPR006674 HD domain RG43_RS08325 b6ab0ea4e5d049b6c351164deb577815 199 Pfam PF13023 HD domain 11 160 6.9E-17 T 09-03-2017 IPR006674 HD domain RG43_RS11080 7700d77c7bb69673399c7688a6fc8350 382 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 6 353 6.9E-141 T 09-03-2017 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 RG43_RS11080 7700d77c7bb69673399c7688a6fc8350 382 SUPERFAMILY SSF160544 243 350 6.28E-41 T 09-03-2017 IPR029025 Type III secretion system substrate exporter, C-terminal RG43_RS11080 7700d77c7bb69673399c7688a6fc8350 382 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 207 225 1.1E-43 T 09-03-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 RG43_RS11080 7700d77c7bb69673399c7688a6fc8350 382 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 271 286 1.1E-43 T 09-03-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 RG43_RS11080 7700d77c7bb69673399c7688a6fc8350 382 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 227 244 1.1E-43 T 09-03-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 RG43_RS11080 7700d77c7bb69673399c7688a6fc8350 382 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 301 322 1.1E-43 T 09-03-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 RG43_RS11080 7700d77c7bb69673399c7688a6fc8350 382 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 9 31 1.1E-43 T 09-03-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 RG43_RS11080 7700d77c7bb69673399c7688a6fc8350 382 Pfam PF01312 FlhB HrpN YscU SpaS Family 6 346 1.1E-123 T 09-03-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 RG43_RS11080 7700d77c7bb69673399c7688a6fc8350 382 Gene3D G3DSA:3.40.1690.10 217 354 7.5E-64 T 09-03-2017 IPR029025 Type III secretion system substrate exporter, C-terminal RG43_RS17040 2de82ac20539d20c6cd895efb849cd31 66 Pfam PF09048 Cro 1 60 1.3E-33 T 09-03-2017 IPR000655 Regulatory protein cro GO:0003677|GO:0006355 RG43_RS17040 2de82ac20539d20c6cd895efb849cd31 66 PIRSF PIRSF003217 1 66 5.0E-48 T 09-03-2017 IPR000655 Regulatory protein cro GO:0003677|GO:0006355 RG43_RS17040 2de82ac20539d20c6cd895efb849cd31 66 ProDom PD054632 CRO REPRESSOR TRANSCRIPTION REGULATORY 3D-STRUCTURE DNA-BINDING DIRECT EARLY REGULATION SEQUENCING 4 63 2.0E-29 T 09-03-2017 IPR000655 Regulatory protein cro GO:0003677|GO:0006355 RG43_RS17040 2de82ac20539d20c6cd895efb849cd31 66 Gene3D G3DSA:3.30.240.10 1 66 1.5E-37 T 09-03-2017 IPR000655 Regulatory protein cro GO:0003677|GO:0006355 RG43_RS17040 2de82ac20539d20c6cd895efb849cd31 66 SUPERFAMILY SSF47413 1 65 5.62E-29 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS17040 2de82ac20539d20c6cd895efb849cd31 66 PRINTS PR00030 Cro repressor HTH signature 24 39 9.6E-10 T 09-03-2017 IPR000655 Regulatory protein cro GO:0003677|GO:0006355 RG43_RS17040 2de82ac20539d20c6cd895efb849cd31 66 PRINTS PR00030 Cro repressor HTH signature 15 24 9.6E-10 T 09-03-2017 IPR000655 Regulatory protein cro GO:0003677|GO:0006355 RG43_RS09765 de600bacd45daaf2bbe88243c389adad 434 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 36 426 1.4E-162 T 09-03-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RG43_RS09765 de600bacd45daaf2bbe88243c389adad 434 SUPERFAMILY SSF53720 6 429 1.0E-91 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RG43_RS09765 de600bacd45daaf2bbe88243c389adad 434 Gene3D G3DSA:3.40.50.1980 29 240 1.8E-82 T 09-03-2017 RG43_RS09765 de600bacd45daaf2bbe88243c389adad 434 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 7 427 41.552 T 09-03-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RG43_RS09765 de600bacd45daaf2bbe88243c389adad 434 PIRSF PIRSF000099 1 430 6.5E-173 T 09-03-2017 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RG43_RS09765 de600bacd45daaf2bbe88243c389adad 434 PRINTS PR00083 Histidinol dehydrogenase signature 109 136 1.6E-103 T 09-03-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RG43_RS09765 de600bacd45daaf2bbe88243c389adad 434 PRINTS PR00083 Histidinol dehydrogenase signature 36 60 1.6E-103 T 09-03-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RG43_RS09765 de600bacd45daaf2bbe88243c389adad 434 PRINTS PR00083 Histidinol dehydrogenase signature 361 379 1.6E-103 T 09-03-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RG43_RS09765 de600bacd45daaf2bbe88243c389adad 434 PRINTS PR00083 Histidinol dehydrogenase signature 168 194 1.6E-103 T 09-03-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RG43_RS09765 de600bacd45daaf2bbe88243c389adad 434 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 1.6E-103 T 09-03-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RG43_RS09765 de600bacd45daaf2bbe88243c389adad 434 PRINTS PR00083 Histidinol dehydrogenase signature 198 223 1.6E-103 T 09-03-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RG43_RS09765 de600bacd45daaf2bbe88243c389adad 434 PRINTS PR00083 Histidinol dehydrogenase signature 320 345 1.6E-103 T 09-03-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RG43_RS09765 de600bacd45daaf2bbe88243c389adad 434 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 1.6E-103 T 09-03-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RG43_RS09765 de600bacd45daaf2bbe88243c389adad 434 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 230 262 - T 09-03-2017 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 RG43_RS09765 de600bacd45daaf2bbe88243c389adad 434 Pfam PF00815 Histidinol dehydrogenase 28 427 4.3E-167 T 09-03-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RG43_RS14290 6697711c6e912f9ee4c02921c93f6914 486 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 6 486 5.4E-228 T 09-03-2017 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 RG43_RS14290 6697711c6e912f9ee4c02921c93f6914 486 Pfam PF13091 PLD-like domain 332 446 2.2E-22 T 09-03-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 RG43_RS14290 6697711c6e912f9ee4c02921c93f6914 486 Pfam PF13091 PLD-like domain 134 248 1.6E-11 T 09-03-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 RG43_RS14290 6697711c6e912f9ee4c02921c93f6914 486 SUPERFAMILY SSF56024 66 315 4.08E-45 T 09-03-2017 RG43_RS14290 6697711c6e912f9ee4c02921c93f6914 486 Pfam PF13396 Phospholipase_D-nuclease N-terminal 23 59 2.2E-6 T 09-03-2017 IPR027379 Cardiolipin synthase N-terminal RG43_RS14290 6697711c6e912f9ee4c02921c93f6914 486 Gene3D G3DSA:3.30.870.10 111 316 2.9E-33 T 09-03-2017 RG43_RS14290 6697711c6e912f9ee4c02921c93f6914 486 SMART SM00155 399 426 8.2E-6 T 09-03-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 RG43_RS14290 6697711c6e912f9ee4c02921c93f6914 486 SMART SM00155 219 246 2.1E-4 T 09-03-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 RG43_RS14290 6697711c6e912f9ee4c02921c93f6914 486 SUPERFAMILY SSF56024 273 473 9.42E-48 T 09-03-2017 RG43_RS14290 6697711c6e912f9ee4c02921c93f6914 486 Gene3D G3DSA:3.30.870.10 317 460 3.8E-35 T 09-03-2017 RG43_RS14290 6697711c6e912f9ee4c02921c93f6914 486 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 486 51.264 T 09-03-2017 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 RG43_RS11885 f4f2677893478e97056a13c3f2e279af 344 Gene3D G3DSA:3.40.630.30 218 246 2.6E-8 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS11885 f4f2677893478e97056a13c3f2e279af 344 Gene3D G3DSA:3.40.630.30 1 150 2.6E-8 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS11885 f4f2677893478e97056a13c3f2e279af 344 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 337 1.3E-167 T 09-03-2017 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 RG43_RS11885 f4f2677893478e97056a13c3f2e279af 344 Gene3D G3DSA:2.40.40.20 273 337 4.2E-12 T 09-03-2017 RG43_RS11885 f4f2677893478e97056a13c3f2e279af 344 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 335 2.5E-146 T 09-03-2017 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 RG43_RS11885 f4f2677893478e97056a13c3f2e279af 344 Hamap MF_01171 Arginine N-succinyltransferase [astA]. 1 344 70.4 T 09-03-2017 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 RG43_RS11885 f4f2677893478e97056a13c3f2e279af 344 SUPERFAMILY SSF55729 1 337 8.1E-135 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS11885 f4f2677893478e97056a13c3f2e279af 344 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 337 4.3E-155 T 09-03-2017 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 RG43_RS11755 15595555499ed925f1983e61e36f6bd0 294 SUPERFAMILY SSF74650 8 273 4.33E-68 T 09-03-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 RG43_RS11755 15595555499ed925f1983e61e36f6bd0 294 Pfam PF01263 Aldose 1-epimerase 27 273 1.1E-46 T 09-03-2017 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 RG43_RS11755 15595555499ed925f1983e61e36f6bd0 294 PIRSF PIRSF016020 10 294 4.0E-54 T 09-03-2017 IPR025532 Glucose-6-phosphate 1-epimerase RG43_RS11755 15595555499ed925f1983e61e36f6bd0 294 Gene3D G3DSA:2.70.98.10 10 291 4.3E-86 T 09-03-2017 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 RG43_RS22890 18b502d1420a8b81539be8520d37b65a 512 Gene3D G3DSA:1.25.40.10 354 375 4.0E-4 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS22890 18b502d1420a8b81539be8520d37b65a 512 Gene3D G3DSA:1.25.40.10 420 485 4.0E-4 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS22890 18b502d1420a8b81539be8520d37b65a 512 SMART SM00862 24 100 2.7E-18 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RG43_RS22890 18b502d1420a8b81539be8520d37b65a 512 SUPERFAMILY SSF46894 2 102 3.4E-20 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RG43_RS22890 18b502d1420a8b81539be8520d37b65a 512 Pfam PF00486 Transcriptional regulatory protein, C terminal 24 100 4.6E-19 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RG43_RS22890 18b502d1420a8b81539be8520d37b65a 512 Gene3D G3DSA:1.10.10.10 2 103 1.8E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS11735 99403cb6989aea023bfabbc606b38d35 427 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 423 42.712 T 09-03-2017 IPR006698 Uncharacterised protein family UPF0229 RG43_RS11735 99403cb6989aea023bfabbc606b38d35 427 Pfam PF04285 Protein of unknown function (DUF444) 4 421 1.5E-186 T 09-03-2017 IPR006698 Uncharacterised protein family UPF0229 RG43_RS07045 cdea2993cb38865f4938e47237639f28 364 Gene3D G3DSA:3.40.50.720 189 308 8.0E-30 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS07045 cdea2993cb38865f4938e47237639f28 364 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 39 153 6.5E-29 T 09-03-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RG43_RS07045 cdea2993cb38865f4938e47237639f28 364 Gene3D G3DSA:3.90.180.10 5 188 8.0E-49 T 09-03-2017 IPR011032 GroES-like RG43_RS07045 cdea2993cb38865f4938e47237639f28 364 Pfam PF00107 Zinc-binding dehydrogenase 196 323 2.2E-25 T 09-03-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RG43_RS07045 cdea2993cb38865f4938e47237639f28 364 SUPERFAMILY SSF51735 159 318 3.71E-35 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS07045 cdea2993cb38865f4938e47237639f28 364 SUPERFAMILY SSF50129 333 361 1.98E-43 T 09-03-2017 IPR011032 GroES-like RG43_RS07045 cdea2993cb38865f4938e47237639f28 364 SUPERFAMILY SSF50129 10 163 1.98E-43 T 09-03-2017 IPR011032 GroES-like RG43_RS07045 cdea2993cb38865f4938e47237639f28 364 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 80 94 - T 09-03-2017 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 RG43_RS07045 cdea2993cb38865f4938e47237639f28 364 SMART SM00829 22 360 8.0E-7 T 09-03-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RG43_RS18555 de0a7a3f6bb413800e313cbf0f79c5a3 113 Pfam PF01381 Helix-turn-helix 16 69 4.6E-10 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RG43_RS18555 de0a7a3f6bb413800e313cbf0f79c5a3 113 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 6 84 3.3E-31 T 09-03-2017 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 RG43_RS18555 de0a7a3f6bb413800e313cbf0f79c5a3 113 SMART SM00530 15 70 2.9E-9 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RG43_RS18555 de0a7a3f6bb413800e313cbf0f79c5a3 113 SUPERFAMILY SSF47413 11 88 3.25E-23 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS18555 de0a7a3f6bb413800e313cbf0f79c5a3 113 Gene3D G3DSA:1.10.260.40 1 88 1.7E-31 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS00550 527e433349d66445e6c1224986f9ef24 55 SUPERFAMILY SSF57829 1 53 4.27E-20 T 09-03-2017 IPR011332 Zinc-binding ribosomal protein GO:0006412 RG43_RS00550 527e433349d66445e6c1224986f9ef24 55 Pfam PF00471 Ribosomal protein L33 7 53 8.7E-19 T 09-03-2017 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS00550 527e433349d66445e6c1224986f9ef24 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 09-03-2017 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS00550 527e433349d66445e6c1224986f9ef24 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 3.9E-28 T 09-03-2017 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS00550 527e433349d66445e6c1224986f9ef24 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 15.857 T 09-03-2017 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS15525 e171f3b7da272a4a0c9b07622a1c003c 442 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 26 423 6.5E-120 T 09-03-2017 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 RG43_RS15525 e171f3b7da272a4a0c9b07622a1c003c 442 TIGRFAM TIGR03616 RutG: pyrimidine utilization transport protein G 1 428 9.7E-256 T 09-03-2017 IPR019918 Pyrimidine permease RutG, predicted GO:0006864|GO:0015218 RG43_RS15525 e171f3b7da272a4a0c9b07622a1c003c 442 Pfam PF00860 Permease family 31 401 3.9E-105 T 09-03-2017 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RG43_RS15525 e171f3b7da272a4a0c9b07622a1c003c 442 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 348 368 - T 09-03-2017 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 RG43_RS00195 6402cabf288b3261430a721d5786bc28 147 SUPERFAMILY SSF55804 6 146 4.06E-34 T 09-03-2017 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 RG43_RS00195 6402cabf288b3261430a721d5786bc28 147 Gene3D G3DSA:3.40.930.10 5 146 1.3E-47 T 09-03-2017 IPR002178 PTS EIIA type-2 domain RG43_RS00195 6402cabf288b3261430a721d5786bc28 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 145 5.4E-34 T 09-03-2017 IPR002178 PTS EIIA type-2 domain RG43_RS13010 87ba9a21c7c1e4b4e52f662879f00607 236 Gene3D G3DSA:2.60.40.1070 154 232 5.4E-26 T 09-03-2017 IPR016148 Pili assembly chaperone, C-terminal RG43_RS13010 87ba9a21c7c1e4b4e52f662879f00607 236 Gene3D G3DSA:2.60.40.360 33 149 3.8E-45 T 09-03-2017 IPR008962 PapD-like RG43_RS13010 87ba9a21c7c1e4b4e52f662879f00607 236 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 106 123 - T 09-03-2017 IPR018046 Pili assembly chaperone, conserved site RG43_RS13010 87ba9a21c7c1e4b4e52f662879f00607 236 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 175 228 3.3E-12 T 09-03-2017 IPR016148 Pili assembly chaperone, C-terminal RG43_RS13010 87ba9a21c7c1e4b4e52f662879f00607 236 PRINTS PR00969 Pili chaperone signature 33 42 4.8E-36 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS13010 87ba9a21c7c1e4b4e52f662879f00607 236 PRINTS PR00969 Pili chaperone signature 78 99 4.8E-36 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS13010 87ba9a21c7c1e4b4e52f662879f00607 236 PRINTS PR00969 Pili chaperone signature 107 124 4.8E-36 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS13010 87ba9a21c7c1e4b4e52f662879f00607 236 PRINTS PR00969 Pili chaperone signature 168 183 4.8E-36 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS13010 87ba9a21c7c1e4b4e52f662879f00607 236 PRINTS PR00969 Pili chaperone signature 133 148 4.8E-36 T 09-03-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RG43_RS13010 87ba9a21c7c1e4b4e52f662879f00607 236 SUPERFAMILY SSF49354 33 151 3.14E-40 T 09-03-2017 IPR008962 PapD-like RG43_RS13010 87ba9a21c7c1e4b4e52f662879f00607 236 SUPERFAMILY SSF49584 146 231 1.7E-21 T 09-03-2017 IPR016148 Pili assembly chaperone, C-terminal RG43_RS13010 87ba9a21c7c1e4b4e52f662879f00607 236 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 33 151 7.1E-39 T 09-03-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 RG43_RS17635 8558089ac0724650662c70f094e8ec77 439 TIGRFAM TIGR04299 antiport_PotE: putrescine-ornithine antiporter 4 433 1.1E-254 T 09-03-2017 IPR027566 Putrescine-ornithine antiporter GO:0015496|GO:0015822|GO:0015847 RG43_RS17635 8558089ac0724650662c70f094e8ec77 439 Pfam PF13520 Amino acid permease 10 408 2.1E-47 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RG43_RS17635 8558089ac0724650662c70f094e8ec77 439 PIRSF PIRSF006060 1 437 1.3E-47 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RG43_RS17635 8558089ac0724650662c70f094e8ec77 439 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 1 432 1.2E-152 T 09-03-2017 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 RG43_RS11345 cabd1749c73dec702ddc1e9f8f8ae5bb 167 Pfam PF03400 IS1 transposase 37 167 1.5E-78 T 09-03-2017 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 RG43_RS15600 cabd1749c73dec702ddc1e9f8f8ae5bb 167 Pfam PF03400 IS1 transposase 37 167 1.5E-78 T 09-03-2017 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 RG43_RS07030 cabd1749c73dec702ddc1e9f8f8ae5bb 167 Pfam PF03400 IS1 transposase 37 167 1.5E-78 T 09-03-2017 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 RG43_RS23015 7abf516279ea0ff27a6552c9ad978d94 222 SUPERFAMILY SSF46894 118 218 7.37E-27 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RG43_RS23015 7abf516279ea0ff27a6552c9ad978d94 222 Pfam PF00072 Response regulator receiver domain 3 113 1.3E-25 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS23015 7abf516279ea0ff27a6552c9ad978d94 222 SMART SM00862 145 216 9.1E-22 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RG43_RS23015 7abf516279ea0ff27a6552c9ad978d94 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 1.7E-20 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RG43_RS23015 7abf516279ea0ff27a6552c9ad978d94 222 Gene3D G3DSA:1.10.10.10 124 219 8.9E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS23015 7abf516279ea0ff27a6552c9ad978d94 222 SUPERFAMILY SSF52172 1 132 8.68E-36 T 09-03-2017 IPR011006 CheY-like superfamily RG43_RS23015 7abf516279ea0ff27a6552c9ad978d94 222 Gene3D G3DSA:3.40.50.2300 1 123 2.6E-35 T 09-03-2017 RG43_RS23015 7abf516279ea0ff27a6552c9ad978d94 222 SMART SM00448 1 112 9.9E-36 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS08875 d4897918f175b1f2ae85206babd6293b 396 Gene3D G3DSA:1.20.1250.20 12 194 1.6E-33 T 09-03-2017 RG43_RS08875 d4897918f175b1f2ae85206babd6293b 396 Gene3D G3DSA:1.20.1250.20 211 393 2.5E-10 T 09-03-2017 RG43_RS08875 d4897918f175b1f2ae85206babd6293b 396 Pfam PF07690 Major Facilitator Superfamily 16 358 1.1E-45 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS08875 d4897918f175b1f2ae85206babd6293b 396 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 6 390 5.8E-162 T 09-03-2017 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 RG43_RS08875 d4897918f175b1f2ae85206babd6293b 396 TIGRFAM TIGR00880 2_A_01_02: multidrug resistance protein 52 188 4.0E-42 T 09-03-2017 IPR004734 Multidrug resistance protein GO:0015238|GO:0015893|GO:0016021 Reactome: R-HSA-442660 RG43_RS08875 d4897918f175b1f2ae85206babd6293b 396 SUPERFAMILY SSF103473 8 395 9.29E-70 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS11440 a328e251668c2db3f046ac6d22d2ee50 165 SMART SM00065 9 161 3.5E-14 T 09-03-2017 IPR003018 GAF domain GO:0005515 RG43_RS11440 a328e251668c2db3f046ac6d22d2ee50 165 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 90 107 - T 09-03-2017 IPR000614 Free Met sulfoxide reductase conserved site RG43_RS11440 a328e251668c2db3f046ac6d22d2ee50 165 Pfam PF13185 GAF domain 34 151 4.6E-12 T 09-03-2017 IPR003018 GAF domain GO:0005515 RG43_RS11440 a328e251668c2db3f046ac6d22d2ee50 165 Gene3D G3DSA:3.30.450.40 2 151 1.6E-49 T 09-03-2017 IPR029016 GAF domain-like RG43_RS11440 a328e251668c2db3f046ac6d22d2ee50 165 SUPERFAMILY SSF55781 2 148 1.37E-41 T 09-03-2017 IPR029016 GAF domain-like RG43_RS07605 34107f84005f2c81f11931c1d0b9a515 338 SUPERFAMILY SSF53850 24 332 4.83E-81 T 09-03-2017 RG43_RS07605 34107f84005f2c81f11931c1d0b9a515 338 ProSitePatterns PS00401 Prokaryotic sulfate-binding proteins signature 1. 53 65 - T 09-03-2017 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 RG43_RS07605 34107f84005f2c81f11931c1d0b9a515 338 Pfam PF13531 Bacterial extracellular solute-binding protein 38 286 1.6E-40 T 09-03-2017 RG43_RS07605 34107f84005f2c81f11931c1d0b9a515 338 Gene3D G3DSA:3.40.190.10 177 301 6.2E-28 T 09-03-2017 RG43_RS07605 34107f84005f2c81f11931c1d0b9a515 338 Gene3D G3DSA:3.40.190.10 26 168 9.1E-44 T 09-03-2017 RG43_RS07605 34107f84005f2c81f11931c1d0b9a515 338 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 13 332 1.2E-184 T 09-03-2017 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 RG43_RS07605 34107f84005f2c81f11931c1d0b9a515 338 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 151 159 - T 09-03-2017 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 RG43_RS16455 aad79e472178b95885808c977a8cbd95 442 Pfam PF17156 Gammaproteobacterial periplasmic sensor domain 26 229 4.7E-141 T 09-03-2017 IPR033422 Gammaproteobacterial periplasmic sensor domain GAPES2 RG43_RS16455 aad79e472178b95885808c977a8cbd95 442 Gene3D G3DSA:3.30.70.270 297 440 4.6E-31 T 09-03-2017 RG43_RS16455 aad79e472178b95885808c977a8cbd95 442 Pfam PF00990 Diguanylate cyclase, GGDEF domain 295 437 2.7E-25 T 09-03-2017 IPR000160 GGDEF domain RG43_RS16455 aad79e472178b95885808c977a8cbd95 442 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 294 439 2.1E-26 T 09-03-2017 IPR000160 GGDEF domain RG43_RS16455 aad79e472178b95885808c977a8cbd95 442 SUPERFAMILY SSF55073 300 440 3.3E-29 T 09-03-2017 IPR029787 Nucleotide cyclase RG43_RS16455 aad79e472178b95885808c977a8cbd95 442 SMART SM00267 285 442 1.5E-45 T 09-03-2017 IPR000160 GGDEF domain RG43_RS20080 bc6c5e4a54d5d8073f241870cb1a1df0 249 Gene3D G3DSA:3.90.1720.10 119 244 2.3E-40 T 09-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain RG43_RS20080 bc6c5e4a54d5d8073f241870cb1a1df0 249 SUPERFAMILY SSF54001 120 243 6.38E-36 T 09-03-2017 RG43_RS20080 bc6c5e4a54d5d8073f241870cb1a1df0 249 Pfam PF00877 NlpC/P60 family 131 241 3.1E-30 T 09-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain RG43_RS07410 da8670a03e7ac4f5eb51931773df3f4a 118 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 115 2.5E-34 T 09-03-2017 IPR006504 Transcriptional regulator Spx/MgsR RG43_RS07410 da8670a03e7ac4f5eb51931773df3f4a 118 Pfam PF03960 ArsC family 5 114 1.6E-17 T 09-03-2017 IPR006660 Arsenate reductase-like RG43_RS07410 da8670a03e7ac4f5eb51931773df3f4a 118 SUPERFAMILY SSF52833 1 115 7.91E-32 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS07410 da8670a03e7ac4f5eb51931773df3f4a 118 Gene3D G3DSA:3.40.30.10 1 115 4.3E-42 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS22545 4781572aaf963790cf6fd00e0138473f 154 Gene3D G3DSA:3.40.930.10 6 150 3.8E-52 T 09-03-2017 IPR002178 PTS EIIA type-2 domain RG43_RS22545 4781572aaf963790cf6fd00e0138473f 154 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 148 9.9E-34 T 09-03-2017 IPR002178 PTS EIIA type-2 domain RG43_RS22545 4781572aaf963790cf6fd00e0138473f 154 SUPERFAMILY SSF55804 7 148 1.96E-36 T 09-03-2017 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 RG43_RS22545 4781572aaf963790cf6fd00e0138473f 154 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 53 69 - T 09-03-2017 IPR002178 PTS EIIA type-2 domain RG43_RS01125 2e6477a5828faa4bb31e32492e007a94 63 Pfam PF11120 Cellulose biosynthesis protein BcsF 2 60 3.9E-30 T 09-03-2017 IPR019995 Cellulose biosynthesis, BcsF/YhjT RG43_RS01125 2e6477a5828faa4bb31e32492e007a94 63 TIGRFAM TIGR03493 cellullose_BcsF: celllulose biosynthesis operon protein BcsF/YhjT 2 63 1.0E-34 T 09-03-2017 IPR019995 Cellulose biosynthesis, BcsF/YhjT RG43_RS01125 2e6477a5828faa4bb31e32492e007a94 63 ProDom PD053231 YHJT MEMBRANE INNER BCSF 2 63 6.0E-29 T 09-03-2017 IPR019995 Cellulose biosynthesis, BcsF/YhjT RG43_RS13725 716e68a97fbca16b35ec7ff2a5d22076 316 Pfam PF00582 Universal stress protein family 174 300 5.7E-15 T 09-03-2017 IPR006016 UspA GO:0006950 RG43_RS13725 716e68a97fbca16b35ec7ff2a5d22076 316 Pfam PF00582 Universal stress protein family 3 146 1.5E-18 T 09-03-2017 IPR006016 UspA GO:0006950 RG43_RS13725 716e68a97fbca16b35ec7ff2a5d22076 316 SUPERFAMILY SSF52402 4 153 7.03E-26 T 09-03-2017 RG43_RS13725 716e68a97fbca16b35ec7ff2a5d22076 316 Gene3D G3DSA:3.40.50.620 143 303 2.2E-31 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS13725 716e68a97fbca16b35ec7ff2a5d22076 316 Gene3D G3DSA:3.40.50.620 1 142 1.7E-22 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS13725 716e68a97fbca16b35ec7ff2a5d22076 316 SUPERFAMILY SSF52402 155 307 5.86E-25 T 09-03-2017 RG43_RS08870 2a68a7cbcd29041d0214232f3c649c29 231 SMART SM00363 1 60 1.7E-11 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 RG43_RS08870 2a68a7cbcd29041d0214232f3c649c29 231 SUPERFAMILY SSF55174 1 55 1.47E-12 T 09-03-2017 RG43_RS08870 2a68a7cbcd29041d0214232f3c649c29 231 Gene3D G3DSA:3.10.290.10 1 64 2.7E-22 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 RG43_RS08870 2a68a7cbcd29041d0214232f3c649c29 231 Pfam PF01479 S4 domain 1 45 2.9E-9 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 RG43_RS08870 2a68a7cbcd29041d0214232f3c649c29 231 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 224 8.1E-61 T 09-03-2017 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 RG43_RS08870 2a68a7cbcd29041d0214232f3c649c29 231 SUPERFAMILY SSF55120 61 227 1.23E-47 T 09-03-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RG43_RS08870 2a68a7cbcd29041d0214232f3c649c29 231 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 09-03-2017 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 RG43_RS08870 2a68a7cbcd29041d0214232f3c649c29 231 Pfam PF00849 RNA pseudouridylate synthase 62 192 9.7E-18 T 09-03-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RG43_RS13675 c18e44d18f3dbd7d6c77a6fdd2e62b77 327 Hamap MF_01565 Zinc transport protein ZntB [zntB]. 1 327 72.982 T 09-03-2017 IPR023714 Zinc transport protein ZntB GO:0005385|GO:0005886|GO:0071577 RG43_RS13675 c18e44d18f3dbd7d6c77a6fdd2e62b77 327 Pfam PF01544 CorA-like Mg2+ transporter protein 39 323 8.4E-65 T 09-03-2017 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 RG43_RS13675 c18e44d18f3dbd7d6c77a6fdd2e62b77 327 Gene3D G3DSA:1.20.58.340 147 244 2.7E-15 T 09-03-2017 RG43_RS13675 c18e44d18f3dbd7d6c77a6fdd2e62b77 327 SUPERFAMILY SSF144083 263 324 4.71E-13 T 09-03-2017 RG43_RS13675 c18e44d18f3dbd7d6c77a6fdd2e62b77 327 SUPERFAMILY SSF143865 8 255 1.22E-48 T 09-03-2017 RG43_RS13675 c18e44d18f3dbd7d6c77a6fdd2e62b77 327 Gene3D G3DSA:1.20.58.340 251 327 2.3E-18 T 09-03-2017 RG43_RS16765 83b97c4d0dc8b6dfef913ac477c56ba2 225 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 176 1.1E-67 T 09-03-2017 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 RG43_RS16765 83b97c4d0dc8b6dfef913ac477c56ba2 225 SUPERFAMILY SSF52540 3 211 6.28E-66 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16765 83b97c4d0dc8b6dfef913ac477c56ba2 225 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 216 30.675 T 09-03-2017 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 RG43_RS16765 83b97c4d0dc8b6dfef913ac477c56ba2 225 Gene3D G3DSA:3.40.50.300 3 214 1.5E-83 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16765 83b97c4d0dc8b6dfef913ac477c56ba2 225 PIRSF PIRSF006755 1 225 4.8E-90 T 09-03-2017 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 RG43_RS16765 83b97c4d0dc8b6dfef913ac477c56ba2 225 Pfam PF13500 AAA domain 3 208 5.2E-40 T 09-03-2017 RG43_RS03075 3e5a1611818dc3e68ad57f45d999d7a6 282 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 09-03-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RG43_RS03075 3e5a1611818dc3e68ad57f45d999d7a6 282 Pfam PF00809 Pterin binding enzyme 18 257 6.1E-92 T 09-03-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RG43_RS03075 3e5a1611818dc3e68ad57f45d999d7a6 282 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 09-03-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RG43_RS03075 3e5a1611818dc3e68ad57f45d999d7a6 282 Gene3D G3DSA:3.20.20.20 12 274 2.0E-111 T 09-03-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RG43_RS03075 3e5a1611818dc3e68ad57f45d999d7a6 282 SUPERFAMILY SSF51717 6 274 2.62E-106 T 09-03-2017 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RG43_RS03075 3e5a1611818dc3e68ad57f45d999d7a6 282 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 17 271 1.8E-103 T 09-03-2017 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 RG43_RS07495 745f465c0b95d8f5cceb16537942a133 95 Gene3D G3DSA:2.40.50.220 1 95 4.8E-35 T 09-03-2017 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml RG43_RS07495 745f465c0b95d8f5cceb16537942a133 95 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 1 83 1.4E-29 T 09-03-2017 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml RG43_RS07495 745f465c0b95d8f5cceb16537942a133 95 SUPERFAMILY SSF159133 1 94 1.02E-30 T 09-03-2017 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml RG43_RS07495 745f465c0b95d8f5cceb16537942a133 95 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 11 83 8.0E-37 T 09-03-2017 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml RG43_RS19835 d453a09d9d94b517db96b740ac62c24e 107 Pfam PF09956 Uncharacterized conserved protein (DUF2190) 3 105 9.7E-28 T 09-03-2017 IPR011231 Bacteriophage VT1-Sakai, H0018 RG43_RS19835 d453a09d9d94b517db96b740ac62c24e 107 PIRSF PIRSF030771 1 107 1.5E-62 T 09-03-2017 IPR011231 Bacteriophage VT1-Sakai, H0018 RG43_RS14990 8465afe57009567444981b8b82451546 341 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 234 251 - T 09-03-2017 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 RG43_RS14990 8465afe57009567444981b8b82451546 341 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 332 48.868 T 09-03-2017 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 RG43_RS14990 8465afe57009567444981b8b82451546 341 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 7 318 2.4E-101 T 09-03-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 RG43_RS14990 8465afe57009567444981b8b82451546 341 Gene3D G3DSA:3.20.20.300 3 330 4.1E-97 T 09-03-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 RG43_RS14990 8465afe57009567444981b8b82451546 341 SUPERFAMILY SSF51445 3 316 1.37E-86 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily RG43_RS17835 d7b01c3e14a7b38ae3849f7239eec72d 302 Gene3D G3DSA:3.40.190.10 234 276 7.2E-32 T 09-03-2017 RG43_RS17835 d7b01c3e14a7b38ae3849f7239eec72d 302 Gene3D G3DSA:3.40.190.10 38 125 7.2E-32 T 09-03-2017 RG43_RS17835 d7b01c3e14a7b38ae3849f7239eec72d 302 SMART SM00062 41 273 4.5E-72 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RG43_RS17835 d7b01c3e14a7b38ae3849f7239eec72d 302 Gene3D G3DSA:3.40.190.10 126 233 8.4E-33 T 09-03-2017 RG43_RS17835 d7b01c3e14a7b38ae3849f7239eec72d 302 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 271 3.2E-49 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RG43_RS17835 d7b01c3e14a7b38ae3849f7239eec72d 302 SUPERFAMILY SSF53850 8 274 3.5E-65 T 09-03-2017 RG43_RS05175 b6410f398d7f0e576fe6fd3b0aeaec5c 714 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 28 547 4.5E-283 T 09-03-2017 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0008152|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 RG43_RS05175 b6410f398d7f0e576fe6fd3b0aeaec5c 714 Gene3D G3DSA:3.40.50.280 553 711 9.1E-68 T 09-03-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 RG43_RS05175 b6410f398d7f0e576fe6fd3b0aeaec5c 714 SUPERFAMILY SSF52242 555 713 1.96E-55 T 09-03-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 RG43_RS05175 b6410f398d7f0e576fe6fd3b0aeaec5c 714 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 583 713 1.6E-65 T 09-03-2017 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 RG43_RS05175 b6410f398d7f0e576fe6fd3b0aeaec5c 714 SUPERFAMILY SSF51703 3 542 4.71E-221 T 09-03-2017 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 RG43_RS05175 b6410f398d7f0e576fe6fd3b0aeaec5c 714 ProSitePatterns PS00544 Methylmalonyl-CoA mutase signature. 370 395 - T 09-03-2017 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 RG43_RS05175 b6410f398d7f0e576fe6fd3b0aeaec5c 714 Pfam PF02310 B12 binding domain 586 699 6.5E-16 T 09-03-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 RG43_RS05175 b6410f398d7f0e576fe6fd3b0aeaec5c 714 Pfam PF01642 Methylmalonyl-CoA mutase 28 539 7.3E-237 T 09-03-2017 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 RG43_RS05175 b6410f398d7f0e576fe6fd3b0aeaec5c 714 Gene3D G3DSA:3.20.20.240 27 493 1.4E-208 T 09-03-2017 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain GO:0008152|GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 RG43_RS20995 a2a1928d24986e544202ec604ed6f145 297 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 27 296 9.5E-105 T 09-03-2017 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 RG43_RS20995 a2a1928d24986e544202ec604ed6f145 297 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 43 129 3.5E-24 T 09-03-2017 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 RG43_RS20995 a2a1928d24986e544202ec604ed6f145 297 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 131 295 4.1E-63 T 09-03-2017 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 RG43_RS20995 a2a1928d24986e544202ec604ed6f145 297 SUPERFAMILY SSF54675 14 130 1.53E-32 T 09-03-2017 RG43_RS20995 a2a1928d24986e544202ec604ed6f145 297 SUPERFAMILY SSF51690 131 296 9.81E-60 T 09-03-2017 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 RG43_RS20995 a2a1928d24986e544202ec604ed6f145 297 Gene3D G3DSA:3.20.20.70 152 285 8.4E-60 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS20995 a2a1928d24986e544202ec604ed6f145 297 PIRSF PIRSF006250 17 297 2.6E-115 T 09-03-2017 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 RG43_RS20995 a2a1928d24986e544202ec604ed6f145 297 Gene3D G3DSA:3.90.1170.20 20 151 8.4E-47 T 09-03-2017 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 RG43_RS16890 984cc69624ff57eff74f8bf8a3409d67 131 Pfam PF06141 Phage minor tail protein U 1 129 2.9E-49 T 09-03-2017 IPR009312 Minor tail protein U-like RG43_RS16890 984cc69624ff57eff74f8bf8a3409d67 131 SUPERFAMILY SSF143749 2 130 8.63E-50 T 09-03-2017 IPR009312 Minor tail protein U-like RG43_RS23240 4c3c0148b0a15aa9265905959e8f9a75 572 Pfam PF01578 Cytochrome C assembly protein 92 299 6.6E-50 T 09-03-2017 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 RG43_RS23240 4c3c0148b0a15aa9265905959e8f9a75 572 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 424 563 8.5E-37 T 09-03-2017 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal RG43_RS23240 4c3c0148b0a15aa9265905959e8f9a75 572 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 321 424 1.0E-21 T 09-03-2017 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal RG43_RS23240 4c3c0148b0a15aa9265905959e8f9a75 572 PRINTS PR01413 Cytochrome c-type biogenesis protein NrfE signature 376 388 2.2E-40 T 09-03-2017 IPR003570 Cytochrome c-type biogenesis protein NrfE GO:0015232|GO:0015886|GO:0016020|GO:0017004 RG43_RS23240 4c3c0148b0a15aa9265905959e8f9a75 572 PRINTS PR01413 Cytochrome c-type biogenesis protein NrfE signature 321 336 2.2E-40 T 09-03-2017 IPR003570 Cytochrome c-type biogenesis protein NrfE GO:0015232|GO:0015886|GO:0016020|GO:0017004 RG43_RS23240 4c3c0148b0a15aa9265905959e8f9a75 572 PRINTS PR01413 Cytochrome c-type biogenesis protein NrfE signature 559 572 2.2E-40 T 09-03-2017 IPR003570 Cytochrome c-type biogenesis protein NrfE GO:0015232|GO:0015886|GO:0016020|GO:0017004 RG43_RS23240 4c3c0148b0a15aa9265905959e8f9a75 572 PRINTS PR01413 Cytochrome c-type biogenesis protein NrfE signature 446 465 2.2E-40 T 09-03-2017 IPR003570 Cytochrome c-type biogenesis protein NrfE GO:0015232|GO:0015886|GO:0016020|GO:0017004 RG43_RS23240 4c3c0148b0a15aa9265905959e8f9a75 572 PRINTS PR01413 Cytochrome c-type biogenesis protein NrfE signature 342 360 2.2E-40 T 09-03-2017 IPR003570 Cytochrome c-type biogenesis protein NrfE GO:0015232|GO:0015886|GO:0016020|GO:0017004 RG43_RS23240 4c3c0148b0a15aa9265905959e8f9a75 572 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 297 313 4.5E-72 T 09-03-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RG43_RS23240 4c3c0148b0a15aa9265905959e8f9a75 572 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 313 332 4.5E-72 T 09-03-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RG43_RS23240 4c3c0148b0a15aa9265905959e8f9a75 572 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 247 267 4.5E-72 T 09-03-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RG43_RS23240 4c3c0148b0a15aa9265905959e8f9a75 572 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 277 297 4.5E-72 T 09-03-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RG43_RS23240 4c3c0148b0a15aa9265905959e8f9a75 572 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 135 152 4.5E-72 T 09-03-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RG43_RS23240 4c3c0148b0a15aa9265905959e8f9a75 572 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 83 109 4.5E-72 T 09-03-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RG43_RS23240 4c3c0148b0a15aa9265905959e8f9a75 572 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 162 184 4.5E-72 T 09-03-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RG43_RS23240 4c3c0148b0a15aa9265905959e8f9a75 572 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 213 239 4.5E-72 T 09-03-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RG43_RS23240 4c3c0148b0a15aa9265905959e8f9a75 572 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 56 410 6.3E-184 T 09-03-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 RG43_RS18280 1379805954edf9b00da7b82e594e59b6 296 Pfam PF14488 Domain of unknown function (DUF4434) 21 186 2.4E-31 T 09-03-2017 IPR027849 Protein of unknown function DUF4434 RG43_RS21430 893ac3fc6cc38127aa1f29fbda66dcc0 164 ProSitePatterns PS00855 Signal peptidases II signature. 104 116 - T 09-03-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 RG43_RS21430 893ac3fc6cc38127aa1f29fbda66dcc0 164 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 162 17.026 T 09-03-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 RG43_RS21430 893ac3fc6cc38127aa1f29fbda66dcc0 164 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 53 61 1.5E-19 T 09-03-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 RG43_RS21430 893ac3fc6cc38127aa1f29fbda66dcc0 164 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 101 116 1.5E-19 T 09-03-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 RG43_RS21430 893ac3fc6cc38127aa1f29fbda66dcc0 164 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 137 153 1.5E-19 T 09-03-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 RG43_RS21430 893ac3fc6cc38127aa1f29fbda66dcc0 164 TIGRFAM TIGR00077 lspA: signal peptidase II 1 164 4.2E-61 T 09-03-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 RG43_RS21430 893ac3fc6cc38127aa1f29fbda66dcc0 164 Pfam PF01252 Signal peptidase (SPase) II 16 155 4.9E-35 T 09-03-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 RG43_RS03500 aed423fc25082d10185f8b7526bd5327 184 PIRSF PIRSF011443 1 180 4.6E-70 T 09-03-2017 IPR026267 Inner membrane protein YgjV RG43_RS03500 aed423fc25082d10185f8b7526bd5327 184 Pfam PF10688 Bacterial inner membrane protein 5 163 3.8E-57 T 09-03-2017 IPR019629 Uncharacterised protein family HI1736/YgjV RG43_RS03050 df874edc8e64399bf23bd2fd811a3902 477 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 20 468 4.3E-178 T 09-03-2017 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RG43_RS03050 df874edc8e64399bf23bd2fd811a3902 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 58 77 5.6E-39 T 09-03-2017 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RG43_RS03050 df874edc8e64399bf23bd2fd811a3902 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 360 374 5.6E-39 T 09-03-2017 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RG43_RS03050 df874edc8e64399bf23bd2fd811a3902 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 424 437 5.6E-39 T 09-03-2017 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RG43_RS03050 df874edc8e64399bf23bd2fd811a3902 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 345 359 5.6E-39 T 09-03-2017 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RG43_RS03050 df874edc8e64399bf23bd2fd811a3902 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 286 308 5.6E-39 T 09-03-2017 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RG43_RS03050 df874edc8e64399bf23bd2fd811a3902 477 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 46 447 4.0E-186 T 09-03-2017 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RG43_RS03050 df874edc8e64399bf23bd2fd811a3902 477 SUPERFAMILY SSF56601 23 473 1.25E-100 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like RG43_RS03050 df874edc8e64399bf23bd2fd811a3902 477 Gene3D G3DSA:3.40.710.10 227 455 2.8E-67 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like RG43_RS11225 539598d2fa64fa2ffaa2e499b33e63ab 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 7.3E-45 T 09-03-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RG43_RS11225 539598d2fa64fa2ffaa2e499b33e63ab 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 7.3E-45 T 09-03-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RG43_RS11225 539598d2fa64fa2ffaa2e499b33e63ab 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 7.3E-45 T 09-03-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RG43_RS11225 539598d2fa64fa2ffaa2e499b33e63ab 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 7.3E-45 T 09-03-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RG43_RS11225 539598d2fa64fa2ffaa2e499b33e63ab 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 7.3E-45 T 09-03-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RG43_RS11225 539598d2fa64fa2ffaa2e499b33e63ab 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 09-03-2017 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 RG43_RS11225 539598d2fa64fa2ffaa2e499b33e63ab 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 6.1E-69 T 09-03-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RG43_RS11225 539598d2fa64fa2ffaa2e499b33e63ab 173 SUPERFAMILY SSF53098 3 156 1.87E-56 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS11225 539598d2fa64fa2ffaa2e499b33e63ab 173 Gene3D G3DSA:3.30.420.10 3 157 1.3E-67 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS11225 539598d2fa64fa2ffaa2e499b33e63ab 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 46.69 T 09-03-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RG43_RS11225 539598d2fa64fa2ffaa2e499b33e63ab 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 159 2.8E-88 T 09-03-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RG43_RS05075 8a3b619480ebab22d78053fac1349aef 302 SUPERFAMILY SSF117892 62 197 1.06E-11 T 09-03-2017 IPR001107 Band 7 domain RG43_RS05075 8a3b619480ebab22d78053fac1349aef 302 Pfam PF01145 SPFH domain / Band 7 family 35 210 6.0E-25 T 09-03-2017 IPR001107 Band 7 domain RG43_RS05075 8a3b619480ebab22d78053fac1349aef 302 SMART SM00244 31 193 2.5E-11 T 09-03-2017 IPR001107 Band 7 domain RG43_RS24580 ffc43a48b7e5b704273e2729cf55af2a 329 Gene3D G3DSA:3.10.129.10 161 315 4.2E-65 T 09-03-2017 IPR029069 HotDog domain RG43_RS24580 ffc43a48b7e5b704273e2729cf55af2a 329 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 181 314 4.6E-49 T 09-03-2017 IPR012660 Thioesterase, putative RG43_RS24580 ffc43a48b7e5b704273e2729cf55af2a 329 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 174 313 5.9E-50 T 09-03-2017 IPR012660 Thioesterase, putative RG43_RS24580 ffc43a48b7e5b704273e2729cf55af2a 329 SUPERFAMILY SSF55729 15 162 1.69E-29 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS24580 ffc43a48b7e5b704273e2729cf55af2a 329 SUPERFAMILY SSF54637 171 313 8.25E-41 T 09-03-2017 IPR029069 HotDog domain RG43_RS24580 ffc43a48b7e5b704273e2729cf55af2a 329 Gene3D G3DSA:3.40.630.30 24 160 1.5E-26 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS24580 ffc43a48b7e5b704273e2729cf55af2a 329 Pfam PF13673 Acetyltransferase (GNAT) domain 56 145 5.2E-13 T 09-03-2017 IPR000182 GNAT domain GO:0008080 RG43_RS15110 4c0da28cfac3276414ddb92eade91f86 356 SUPERFAMILY SSF53659 4 340 1.03E-103 T 09-03-2017 RG43_RS15110 4c0da28cfac3276414ddb92eade91f86 356 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 345 142.289 T 09-03-2017 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 RG43_RS15110 4c0da28cfac3276414ddb92eade91f86 356 Pfam PF02504 Fatty acid synthesis protein 5 331 7.3E-130 T 09-03-2017 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 RG43_RS15110 4c0da28cfac3276414ddb92eade91f86 356 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 345 8.9E-149 T 09-03-2017 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 RG43_RS15110 4c0da28cfac3276414ddb92eade91f86 356 PIRSF PIRSF002465 2 343 2.3E-128 T 09-03-2017 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 RG43_RS15110 4c0da28cfac3276414ddb92eade91f86 356 Gene3D G3DSA:3.40.718.10 3 339 6.2E-136 T 09-03-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 RG43_RS24125 e81e68988795aeb2ce9835959f9626ea 79 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 18.505 T 09-03-2017 IPR009252 Cell division protein ZapB GO:0000917|GO:0005737|GO:0043093 RG43_RS24125 e81e68988795aeb2ce9835959f9626ea 79 Pfam PF06005 Protein of unknown function (DUF904) 1 78 2.6E-25 T 09-03-2017 IPR009252 Cell division protein ZapB GO:0000917|GO:0005737|GO:0043093 RG43_RS16505 694cee7f5baa0f0c5d068015ecb360fc 299 PIRSF PIRSF000371 1 298 1.1E-92 T 09-03-2017 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 RG43_RS16505 694cee7f5baa0f0c5d068015ecb360fc 299 Pfam PF13353 4Fe-4S single cluster domain 12 153 7.7E-10 T 09-03-2017 RG43_RS16505 694cee7f5baa0f0c5d068015ecb360fc 299 Pfam PF04055 Radical SAM superfamily 19 229 1.0E-32 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 RG43_RS16505 694cee7f5baa0f0c5d068015ecb360fc 299 Gene3D G3DSA:3.80.30.10 122 297 3.8E-55 T 09-03-2017 RG43_RS16505 694cee7f5baa0f0c5d068015ecb360fc 299 SUPERFAMILY SSF102114 105 267 2.75E-14 T 09-03-2017 RG43_RS16505 694cee7f5baa0f0c5d068015ecb360fc 299 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 2 292 3.7E-111 T 09-03-2017 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 RG43_RS16505 694cee7f5baa0f0c5d068015ecb360fc 299 ProSitePatterns PS01087 Radical activating enzymes signature. 13 34 - T 09-03-2017 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 RG43_RS25115 c1728d2a3b5202644c4e4708709468f7 246 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 242 1.6E-39 T 09-03-2017 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RG43_RS25115 c1728d2a3b5202644c4e4708709468f7 246 SUPERFAMILY SSF69618 1 245 2.35E-53 T 09-03-2017 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RG43_RS25115 c1728d2a3b5202644c4e4708709468f7 246 Gene3D G3DSA:3.40.50.10090 123 245 7.0E-11 T 09-03-2017 RG43_RS25115 c1728d2a3b5202644c4e4708709468f7 246 Gene3D G3DSA:3.40.50.10090 2 119 1.7E-10 T 09-03-2017 RG43_RS00605 d5985c46e739d0a7a58a367531c039af 257 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 4 183 1.1E-46 T 09-03-2017 IPR002654 Glycosyl transferase, family 25 RG43_RS21545 a377b9e7b9b2e037d46d674f2db5648d 228 Pfam PF00588 SpoU rRNA Methylase family 3 153 1.0E-33 T 09-03-2017 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 RG43_RS21545 a377b9e7b9b2e037d46d674f2db5648d 228 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 226 5.6E-83 T 09-03-2017 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 RG43_RS21545 a377b9e7b9b2e037d46d674f2db5648d 228 Gene3D G3DSA:3.40.1280.10 2 159 3.5E-28 T 09-03-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RG43_RS21545 a377b9e7b9b2e037d46d674f2db5648d 228 SUPERFAMILY SSF75217 2 157 9.81E-31 T 09-03-2017 IPR029028 Alpha/beta knot methyltransferases RG43_RS21545 a377b9e7b9b2e037d46d674f2db5648d 228 PIRSF PIRSF004808 1 228 4.0E-65 T 09-03-2017 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 RG43_RS23245 4e770a7c64c961067c0237cc8cf3accd 318 Gene3D G3DSA:1.20.1630.10 13 295 1.9E-7 T 09-03-2017 RG43_RS23245 4e770a7c64c961067c0237cc8cf3accd 318 Pfam PF03916 Polysulphide reductase, NrfD 5 318 2.3E-111 T 09-03-2017 IPR005614 NrfD family RG43_RS23245 4e770a7c64c961067c0237cc8cf3accd 318 TIGRFAM TIGR03148 cyt_nit_nrfD: cytochrome c nitrite reductase, NrfD subunit 5 318 3.3E-140 T 09-03-2017 IPR017566 NrfD RG43_RS10935 f280d9f948d7fad2e551a8eb6e58ff3f 165 Pfam PF00210 Ferritin-like domain 7 143 3.0E-35 T 09-03-2017 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 RG43_RS10935 f280d9f948d7fad2e551a8eb6e58ff3f 165 Gene3D G3DSA:1.20.1260.10 1 160 2.9E-58 T 09-03-2017 IPR012347 Ferritin-related RG43_RS10935 f280d9f948d7fad2e551a8eb6e58ff3f 165 SUPERFAMILY SSF47240 3 161 3.54E-56 T 09-03-2017 IPR009078 Ferritin-like superfamily RG43_RS15560 0114f6ae7e1075852c5a91092266417a 101 Pfam PF13591 MerR HTH family regulatory protein 8 92 3.2E-27 T 09-03-2017 RG43_RS15560 0114f6ae7e1075852c5a91092266417a 101 Hamap MF_01155 Chaperone modulatory protein CbpM [cbpM]. 1 97 24.819 T 09-03-2017 IPR022835 Chaperone modulatory protein CbpM RG43_RS25710 a9f0264e3a3053cb5acfc4e8c4b9819c 366 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 265 280 5.7E-11 T 09-03-2017 RG43_RS25710 a9f0264e3a3053cb5acfc4e8c4b9819c 366 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 5.7E-11 T 09-03-2017 RG43_RS25710 a9f0264e3a3053cb5acfc4e8c4b9819c 366 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 147 162 5.7E-11 T 09-03-2017 RG43_RS25710 a9f0264e3a3053cb5acfc4e8c4b9819c 366 Pfam PF01494 FAD binding domain 135 166 1.8E-5 T 09-03-2017 IPR002938 FAD-binding domain GO:0071949 RG43_RS25710 a9f0264e3a3053cb5acfc4e8c4b9819c 366 Gene3D G3DSA:3.50.50.60 1 171 7.6E-21 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS25710 a9f0264e3a3053cb5acfc4e8c4b9819c 366 Gene3D G3DSA:3.50.50.60 263 297 7.6E-21 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS25710 a9f0264e3a3053cb5acfc4e8c4b9819c 366 SUPERFAMILY SSF51905 3 168 2.19E-30 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS25710 a9f0264e3a3053cb5acfc4e8c4b9819c 366 SUPERFAMILY SSF51905 251 315 2.19E-30 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS23550 552a4e1e40a1442894cdae62b13c42eb 268 SUPERFAMILY SSF51735 8 266 1.82E-66 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS23550 552a4e1e40a1442894cdae62b13c42eb 268 Gene3D G3DSA:3.40.50.720 9 266 1.4E-69 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS23550 552a4e1e40a1442894cdae62b13c42eb 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 3.8E-12 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS23550 552a4e1e40a1442894cdae62b13c42eb 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 3.8E-12 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS23550 552a4e1e40a1442894cdae62b13c42eb 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 3.8E-12 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS23550 552a4e1e40a1442894cdae62b13c42eb 268 Pfam PF00106 short chain dehydrogenase 10 205 2.7E-56 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS23550 552a4e1e40a1442894cdae62b13c42eb 268 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RG43_RS23550 552a4e1e40a1442894cdae62b13c42eb 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 229 249 4.6E-35 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS23550 552a4e1e40a1442894cdae62b13c42eb 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 4.6E-35 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS23550 552a4e1e40a1442894cdae62b13c42eb 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 4.6E-35 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS23550 552a4e1e40a1442894cdae62b13c42eb 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 4.6E-35 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS23550 552a4e1e40a1442894cdae62b13c42eb 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 4.6E-35 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS23550 552a4e1e40a1442894cdae62b13c42eb 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 4.6E-35 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS23550 552a4e1e40a1442894cdae62b13c42eb 268 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 196 0.0096 T 09-03-2017 RG43_RS12870 df3a48ee6cec33ee2e1d9770bc0ac91f 127 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 62 104 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RG43_RS12870 df3a48ee6cec33ee2e1d9770bc0ac91f 127 Gene3D G3DSA:1.10.10.60 7 62 5.7E-25 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS12870 df3a48ee6cec33ee2e1d9770bc0ac91f 127 SMART SM00342 25 108 3.0E-31 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS12870 df3a48ee6cec33ee2e1d9770bc0ac91f 127 Gene3D G3DSA:1.10.10.60 63 125 1.0E-22 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS12870 df3a48ee6cec33ee2e1d9770bc0ac91f 127 Pfam PF12833 Helix-turn-helix domain 32 108 5.8E-18 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS12870 df3a48ee6cec33ee2e1d9770bc0ac91f 127 SUPERFAMILY SSF46689 10 59 1.03E-11 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS12870 df3a48ee6cec33ee2e1d9770bc0ac91f 127 SUPERFAMILY SSF46689 62 111 4.08E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS11645 c04ea858ec7c422e9abbc84a0b95a323 361 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 2 358 3.8E-170 T 09-03-2017 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 RG43_RS11645 c04ea858ec7c422e9abbc84a0b95a323 361 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 355 5.4E-86 T 09-03-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 RG43_RS11645 c04ea858ec7c422e9abbc84a0b95a323 361 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 244 263 - T 09-03-2017 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 RG43_RS11645 c04ea858ec7c422e9abbc84a0b95a323 361 Gene3D G3DSA:3.40.718.10 5 348 1.0E-119 T 09-03-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 RG43_RS11645 c04ea858ec7c422e9abbc84a0b95a323 361 SMART SM01329 6 355 2.1E-178 T 09-03-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 RG43_RS11645 c04ea858ec7c422e9abbc84a0b95a323 361 SUPERFAMILY SSF53659 1 359 5.95E-118 T 09-03-2017 RG43_RS09720 9cdcccd3cbd0ffa934f8fce020fe42e6 334 Gene3D G3DSA:3.40.50.720 1 195 1.3E-61 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS09720 9cdcccd3cbd0ffa934f8fce020fe42e6 334 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 3.7E-29 T 09-03-2017 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 RG43_RS09720 9cdcccd3cbd0ffa934f8fce020fe42e6 334 PRINTS PR01713 Nucleotide sugar epimerase signature 215 230 3.7E-29 T 09-03-2017 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 RG43_RS09720 9cdcccd3cbd0ffa934f8fce020fe42e6 334 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 3.7E-29 T 09-03-2017 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 RG43_RS09720 9cdcccd3cbd0ffa934f8fce020fe42e6 334 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 3.7E-29 T 09-03-2017 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 RG43_RS09720 9cdcccd3cbd0ffa934f8fce020fe42e6 334 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 9.1E-57 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS09720 9cdcccd3cbd0ffa934f8fce020fe42e6 334 SUPERFAMILY SSF51735 1 332 3.77E-92 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS09720 9cdcccd3cbd0ffa934f8fce020fe42e6 334 Gene3D G3DSA:3.90.25.10 196 230 2.0E-21 T 09-03-2017 RG43_RS09720 9cdcccd3cbd0ffa934f8fce020fe42e6 334 Gene3D G3DSA:3.90.25.10 295 330 2.0E-21 T 09-03-2017 RG43_RS09800 de17dfbdc700a2a42612bf3531128fb2 352 Pfam PF04143 Sulphur transport 21 331 3.0E-102 T 09-03-2017 IPR007272 Sulphur transport domain RG43_RS03845 a74a68ade2784f3aefc03bb3c2e8e3cc 337 Pfam PF00814 Glycoprotease family 24 307 5.2E-103 T 09-03-2017 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RG43_RS03845 a74a68ade2784f3aefc03bb3c2e8e3cc 337 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 64.574 T 09-03-2017 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RG43_RS03845 a74a68ade2784f3aefc03bb3c2e8e3cc 337 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 2.7E-130 T 09-03-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RG43_RS03845 a74a68ade2784f3aefc03bb3c2e8e3cc 337 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 09-03-2017 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618|Reactome: R-HSA-6782315 RG43_RS03845 a74a68ade2784f3aefc03bb3c2e8e3cc 337 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 1.4E-136 T 09-03-2017 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RG43_RS03845 a74a68ade2784f3aefc03bb3c2e8e3cc 337 Gene3D G3DSA:3.30.420.40 1 159 1.1E-50 T 09-03-2017 RG43_RS03845 a74a68ade2784f3aefc03bb3c2e8e3cc 337 SUPERFAMILY SSF53067 1 309 2.07E-44 T 09-03-2017 RG43_RS03845 a74a68ade2784f3aefc03bb3c2e8e3cc 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 5.5E-53 T 09-03-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RG43_RS03845 a74a68ade2784f3aefc03bb3c2e8e3cc 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 5.5E-53 T 09-03-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RG43_RS03845 a74a68ade2784f3aefc03bb3c2e8e3cc 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 5.5E-53 T 09-03-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RG43_RS03845 a74a68ade2784f3aefc03bb3c2e8e3cc 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 5.5E-53 T 09-03-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RG43_RS03845 a74a68ade2784f3aefc03bb3c2e8e3cc 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 5.5E-53 T 09-03-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RG43_RS03845 a74a68ade2784f3aefc03bb3c2e8e3cc 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 5.5E-53 T 09-03-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RG43_RS26220 a74a68ade2784f3aefc03bb3c2e8e3cc 337 Pfam PF00814 Glycoprotease family 24 307 5.2E-103 T 09-03-2017 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RG43_RS26220 a74a68ade2784f3aefc03bb3c2e8e3cc 337 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 64.574 T 09-03-2017 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RG43_RS26220 a74a68ade2784f3aefc03bb3c2e8e3cc 337 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 2.7E-130 T 09-03-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RG43_RS26220 a74a68ade2784f3aefc03bb3c2e8e3cc 337 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 09-03-2017 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618|Reactome: R-HSA-6782315 RG43_RS26220 a74a68ade2784f3aefc03bb3c2e8e3cc 337 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 1.4E-136 T 09-03-2017 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RG43_RS26220 a74a68ade2784f3aefc03bb3c2e8e3cc 337 Gene3D G3DSA:3.30.420.40 1 159 1.1E-50 T 09-03-2017 RG43_RS26220 a74a68ade2784f3aefc03bb3c2e8e3cc 337 SUPERFAMILY SSF53067 1 309 2.07E-44 T 09-03-2017 RG43_RS26220 a74a68ade2784f3aefc03bb3c2e8e3cc 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 5.5E-53 T 09-03-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RG43_RS26220 a74a68ade2784f3aefc03bb3c2e8e3cc 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 5.5E-53 T 09-03-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RG43_RS26220 a74a68ade2784f3aefc03bb3c2e8e3cc 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 5.5E-53 T 09-03-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RG43_RS26220 a74a68ade2784f3aefc03bb3c2e8e3cc 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 5.5E-53 T 09-03-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RG43_RS26220 a74a68ade2784f3aefc03bb3c2e8e3cc 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 5.5E-53 T 09-03-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RG43_RS26220 a74a68ade2784f3aefc03bb3c2e8e3cc 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 5.5E-53 T 09-03-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RG43_RS07345 d0a863af2c08e2bba635085fb5147e18 156 Gene3D G3DSA:3.40.30.10 2 155 2.8E-51 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS07345 d0a863af2c08e2bba635085fb5147e18 156 SUPERFAMILY SSF52833 3 154 3.14E-50 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS07345 d0a863af2c08e2bba635085fb5147e18 156 Pfam PF00578 AhpC/TSA family 7 134 4.4E-39 T 09-03-2017 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 RG43_RS07345 d0a863af2c08e2bba635085fb5147e18 156 PIRSF PIRSF000239 1 153 1.3E-17 T 09-03-2017 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 RG43_RS15805 d57b704cd696cd01a790a81ef127c339 169 TIGRFAM TIGR00623 sula: cell division inhibitor SulA 2 169 1.7E-101 T 09-03-2017 IPR004596 Cell division suppressor protein, SulA GO:0009276|GO:0009432|GO:0051782 RG43_RS15805 d57b704cd696cd01a790a81ef127c339 169 Gene3D G3DSA:3.40.50.300 31 147 6.8E-40 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS15805 d57b704cd696cd01a790a81ef127c339 169 PIRSF PIRSF003093 1 169 4.4E-89 T 09-03-2017 IPR004596 Cell division suppressor protein, SulA GO:0009276|GO:0009432|GO:0051782 RG43_RS15805 d57b704cd696cd01a790a81ef127c339 169 Pfam PF03846 Cell division inhibitor SulA 6 119 3.1E-55 T 09-03-2017 IPR004596 Cell division suppressor protein, SulA GO:0009276|GO:0009432|GO:0051782 RG43_RS15805 d57b704cd696cd01a790a81ef127c339 169 Hamap MF_01179 Cell division inhibitor SulA [sulA]. 1 169 42.4 T 09-03-2017 IPR004596 Cell division suppressor protein, SulA GO:0009276|GO:0009432|GO:0051782 RG43_RS15805 d57b704cd696cd01a790a81ef127c339 169 SUPERFAMILY SSF52540 31 147 1.96E-27 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS02845 dda6ceaf53e9cffcc76d12cdc7345b19 455 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 55 444 1.7E-203 T 09-03-2017 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 RG43_RS02845 dda6ceaf53e9cffcc76d12cdc7345b19 455 Pfam PF03606 C4-dicarboxylate anaerobic carrier 2 454 1.5E-125 T 09-03-2017 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 RG43_RS12430 09ee087b4bad3d6f36353d5a0f611c4e 285 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 226 2.7E-39 T 09-03-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RG43_RS12430 09ee087b4bad3d6f36353d5a0f611c4e 285 Gene3D G3DSA:2.40.50.100 151 184 1.6E-19 T 09-03-2017 RG43_RS12430 09ee087b4bad3d6f36353d5a0f611c4e 285 Gene3D G3DSA:2.40.50.100 43 77 1.6E-19 T 09-03-2017 RG43_RS12430 09ee087b4bad3d6f36353d5a0f611c4e 285 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 43 230 4.1E-17 T 09-03-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RG43_RS12430 09ee087b4bad3d6f36353d5a0f611c4e 285 SUPERFAMILY SSF111369 43 219 9.55E-26 T 09-03-2017 RG43_RS12430 09ee087b4bad3d6f36353d5a0f611c4e 285 Pfam PF00529 HlyD membrane-fusion protein of T1SS 17 276 8.0E-9 T 09-03-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RG43_RS08940 dba544ddbc138316162a3bb53f91d15e 84 Pfam PF03692 Putative zinc- or iron-chelating domain 2 60 2.6E-6 T 09-03-2017 IPR005358 Putative zinc- or iron-chelating domain containing protein RG43_RS07775 4f4faf2e6edfb59968e69f289a17a3ce 400 Pfam PF07670 Nucleoside recognition 92 189 5.1E-7 T 09-03-2017 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 RG43_RS07775 4f4faf2e6edfb59968e69f289a17a3ce 400 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 193 398 8.7E-59 T 09-03-2017 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 RG43_RS07775 4f4faf2e6edfb59968e69f289a17a3ce 400 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 10 82 3.7E-21 T 09-03-2017 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 RG43_RS07775 4f4faf2e6edfb59968e69f289a17a3ce 400 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 398 1.5E-146 T 09-03-2017 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 RG43_RS23695 4939a1cdd4b26c7d9053b02c16db7e41 90 SMART SM00411 1 90 3.1E-43 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 RG43_RS23695 4939a1cdd4b26c7d9053b02c16db7e41 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 09-03-2017 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 RG43_RS23695 4939a1cdd4b26c7d9053b02c16db7e41 90 Gene3D G3DSA:4.10.520.10 1 90 3.1E-37 T 09-03-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RG43_RS23695 4939a1cdd4b26c7d9053b02c16db7e41 90 SUPERFAMILY SSF47729 1 90 8.54E-33 T 09-03-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RG43_RS23695 4939a1cdd4b26c7d9053b02c16db7e41 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 3.9E-33 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 RG43_RS23695 4939a1cdd4b26c7d9053b02c16db7e41 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.0E-19 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 RG43_RS23695 4939a1cdd4b26c7d9053b02c16db7e41 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.0E-19 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 RG43_RS23695 4939a1cdd4b26c7d9053b02c16db7e41 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.0E-19 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 RG43_RS24555 9a4b8e3805732e83f0cee3cfa7f67c88 309 SUPERFAMILY SSF144020 24 306 1.44E-99 T 09-03-2017 IPR024064 FdhE-like RG43_RS24555 9a4b8e3805732e83f0cee3cfa7f67c88 309 Hamap MF_00611 Protein FdhE [fdhE]. 3 306 50.309 T 09-03-2017 IPR006452 Formate dehydrogenase accessory protein GO:0005737 RG43_RS24555 9a4b8e3805732e83f0cee3cfa7f67c88 309 Pfam PF04216 Protein involved in formate dehydrogenase formation 22 304 6.4E-117 T 09-03-2017 IPR006452 Formate dehydrogenase accessory protein GO:0005737 RG43_RS24555 9a4b8e3805732e83f0cee3cfa7f67c88 309 TIGRFAM TIGR01562 FdhE: formate dehydrogenase accessory protein FdhE 2 305 1.0E-157 T 09-03-2017 IPR006452 Formate dehydrogenase accessory protein GO:0005737 RG43_RS24555 9a4b8e3805732e83f0cee3cfa7f67c88 309 PIRSF PIRSF018296 1 309 2.1E-136 T 09-03-2017 IPR006452 Formate dehydrogenase accessory protein GO:0005737 RG43_RS24555 9a4b8e3805732e83f0cee3cfa7f67c88 309 Gene3D G3DSA:3.90.1670.10 24 307 4.8E-112 T 09-03-2017 IPR024064 FdhE-like RG43_RS00465 975d63982438977ee643b289c2a2c600 401 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 2 397 2.6E-205 T 09-03-2017 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 RG43_RS00465 975d63982438977ee643b289c2a2c600 401 Pfam PF03616 Sodium/glutamate symporter 2 366 1.9E-164 T 09-03-2017 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 RG43_RS01010 6efc59e9e483cf8774657f795c1bfa24 402 TIGRFAM TIGR00890 2A0111: oxalate/formate antiporter family transporter 9 383 3.1E-144 T 09-03-2017 IPR004741 Oxalate/formate antiporter family transporter GO:0005215|GO:0006810|GO:0016021 RG43_RS01010 6efc59e9e483cf8774657f795c1bfa24 402 Gene3D G3DSA:1.20.1250.20 209 392 2.5E-21 T 09-03-2017 RG43_RS01010 6efc59e9e483cf8774657f795c1bfa24 402 Pfam PF07690 Major Facilitator Superfamily 26 231 1.6E-18 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS01010 6efc59e9e483cf8774657f795c1bfa24 402 Gene3D G3DSA:1.20.1250.20 8 194 3.3E-18 T 09-03-2017 RG43_RS01010 6efc59e9e483cf8774657f795c1bfa24 402 SUPERFAMILY SSF103473 8 393 8.11E-50 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS16555 7b71740b12a1db903033d68260a33d5b 155 SUPERFAMILY SSF47979 95 150 4.84E-15 T 09-03-2017 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 RG43_RS16555 7b71740b12a1db903033d68260a33d5b 155 Gene3D G3DSA:1.10.10.10 36 103 8.1E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS16555 7b71740b12a1db903033d68260a33d5b 155 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 38 92 1.1E-10 T 09-03-2017 IPR022687 DTXR-type HTH domain GO:0003677 RG43_RS16555 7b71740b12a1db903033d68260a33d5b 155 SUPERFAMILY SSF46785 48 117 1.89E-12 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS16555 7b71740b12a1db903033d68260a33d5b 155 SMART SM00529 56 155 1.6E-44 T 09-03-2017 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 RG43_RS16555 7b71740b12a1db903033d68260a33d5b 155 Gene3D G3DSA:1.10.60.10 107 150 2.7E-20 T 09-03-2017 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 RG43_RS16555 7b71740b12a1db903033d68260a33d5b 155 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 95 149 1.2E-14 T 09-03-2017 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 RG43_RS01765 1387284d239157980ad7204434d54b3b 864 SUPERFAMILY SSF141729 38 160 2.62E-29 T 09-03-2017 RG43_RS01765 1387284d239157980ad7204434d54b3b 864 Pfam PF00577 Outer membrane usher protein 196 773 6.1E-199 T 09-03-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 RG43_RS01765 1387284d239157980ad7204434d54b3b 864 Pfam PF13953 PapC C-terminal domain 782 849 8.9E-20 T 09-03-2017 IPR025949 PapC-like, C-terminal domain RG43_RS01765 1387284d239157980ad7204434d54b3b 864 Pfam PF13954 PapC N-terminal domain 39 183 1.5E-43 T 09-03-2017 IPR025885 PapC, N-terminal domain GO:0005515 RG43_RS09540 9e67cc5ff36c4bfb78437ac3c8c7ec97 720 Pfam PF13807 G-rich domain on putative tyrosine kinase 367 447 4.1E-30 T 09-03-2017 IPR032807 Tyrosine kinase, G-rich domain RG43_RS09540 9e67cc5ff36c4bfb78437ac3c8c7ec97 720 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 508 711 5.8E-48 T 09-03-2017 IPR005702 Exopolysaccharide synthesis protein GO:0045226 RG43_RS09540 9e67cc5ff36c4bfb78437ac3c8c7ec97 720 Pfam PF02706 Chain length determinant protein 16 252 2.7E-50 T 09-03-2017 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 RG43_RS09540 9e67cc5ff36c4bfb78437ac3c8c7ec97 720 Pfam PF13614 AAA domain 538 653 1.3E-12 T 09-03-2017 IPR025669 AAA domain RG43_RS09540 9e67cc5ff36c4bfb78437ac3c8c7ec97 720 Gene3D G3DSA:3.40.50.300 527 706 1.6E-34 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS09540 9e67cc5ff36c4bfb78437ac3c8c7ec97 720 SUPERFAMILY SSF52540 527 707 1.37E-36 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS15200 18a635cda0910181c6ca37d44a0e261a 134 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 134 3.3E-52 T 09-03-2017 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 RG43_RS15200 18a635cda0910181c6ca37d44a0e261a 134 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 87 131 1.5E-12 T 09-03-2017 IPR010930 Flagellar basal-body/hook protein, C-terminal domain RG43_RS15200 18a635cda0910181c6ca37d44a0e261a 134 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 09-03-2017 IPR019776 Flagellar basal body rod protein, conserved site RG43_RS15200 18a635cda0910181c6ca37d44a0e261a 134 Pfam PF00460 Flagella basal body rod protein 7 37 1.1E-10 T 09-03-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 RG43_RS06155 18608b9258aecaa99e52eed0e41ca448 197 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 1 185 37.302 T 09-03-2017 IPR004507 Flavin prenyltransferase UbiX/Pad1 RG43_RS06155 18608b9258aecaa99e52eed0e41ca448 197 Hamap MF_01986 Probable UbiX-like flavin prenyltransferase. 1 189 53.042 T 09-03-2017 IPR032901 Probable UbiX-like flavin prenyltransferase RG43_RS06155 18608b9258aecaa99e52eed0e41ca448 197 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 2 183 1.0E-73 T 09-03-2017 IPR004507 Flavin prenyltransferase UbiX/Pad1 RG43_RS06155 18608b9258aecaa99e52eed0e41ca448 197 SUPERFAMILY SSF52507 1 185 6.8E-65 T 09-03-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 RG43_RS06155 18608b9258aecaa99e52eed0e41ca448 197 Gene3D G3DSA:3.40.50.1950 1 185 3.0E-81 T 09-03-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 RG43_RS06155 18608b9258aecaa99e52eed0e41ca448 197 Pfam PF02441 Flavoprotein 1 128 6.0E-25 T 09-03-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 RG43_RS11590 7f57126398f01f003900fef7729d880a 119 Pfam PF08986 Domain of unknown function (DUF1889) 1 119 8.0E-82 T 09-03-2017 IPR015079 Protein of unknown function DUF1889 RG43_RS11590 7f57126398f01f003900fef7729d880a 119 SUPERFAMILY SSF140670 23 119 1.22E-53 T 09-03-2017 RG43_RS19210 278c3b5c593ba40cb8bfce8dcf3eef01 68 Pfam PF12035 Protein of unknown function (DUF3521) 1 28 3.4E-10 T 09-03-2017 IPR021909 Protein of unknown function DUF3521 RG43_RS11480 c168a96fc2b78c20ab1753ca8b0df6f1 263 Gene3D G3DSA:3.30.450.40 86 261 1.1E-70 T 09-03-2017 IPR029016 GAF domain-like RG43_RS11480 c168a96fc2b78c20ab1753ca8b0df6f1 263 Pfam PF01614 Bacterial transcriptional regulator 129 254 1.3E-48 T 09-03-2017 IPR014757 Transcription regulator IclR, C-terminal RG43_RS11480 c168a96fc2b78c20ab1753ca8b0df6f1 263 SMART SM00346 13 102 8.0E-36 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RG43_RS11480 c168a96fc2b78c20ab1753ca8b0df6f1 263 Gene3D G3DSA:1.10.10.10 12 85 1.0E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS11480 c168a96fc2b78c20ab1753ca8b0df6f1 263 SUPERFAMILY SSF55781 77 259 5.23E-56 T 09-03-2017 IPR029016 GAF domain-like RG43_RS11480 c168a96fc2b78c20ab1753ca8b0df6f1 263 SUPERFAMILY SSF46785 13 86 1.43E-15 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS11480 c168a96fc2b78c20ab1753ca8b0df6f1 263 Pfam PF09339 IclR helix-turn-helix domain 15 65 2.2E-13 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RG43_RS15310 941f877beffd9bc430aa3e946905e822 408 Pfam PF07690 Major Facilitator Superfamily 20 263 5.0E-33 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS15310 941f877beffd9bc430aa3e946905e822 408 SUPERFAMILY SSF103473 11 402 7.67E-71 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS15310 941f877beffd9bc430aa3e946905e822 408 Gene3D G3DSA:1.20.1250.20 13 199 2.1E-40 T 09-03-2017 RG43_RS15310 941f877beffd9bc430aa3e946905e822 408 Gene3D G3DSA:1.20.1250.20 210 399 1.3E-27 T 09-03-2017 RG43_RS15310 941f877beffd9bc430aa3e946905e822 408 PRINTS PR01035 Tetracycline resistance protein signature 348 371 9.9E-12 T 09-03-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RG43_RS15310 941f877beffd9bc430aa3e946905e822 408 PRINTS PR01035 Tetracycline resistance protein signature 87 111 9.9E-12 T 09-03-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RG43_RS15310 941f877beffd9bc430aa3e946905e822 408 PRINTS PR01035 Tetracycline resistance protein signature 114 135 9.9E-12 T 09-03-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RG43_RS15310 941f877beffd9bc430aa3e946905e822 408 PRINTS PR01035 Tetracycline resistance protein signature 313 333 9.9E-12 T 09-03-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RG43_RS15310 941f877beffd9bc430aa3e946905e822 408 PRINTS PR01035 Tetracycline resistance protein signature 25 41 9.9E-12 T 09-03-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RG43_RS15310 941f877beffd9bc430aa3e946905e822 408 PRINTS PR01035 Tetracycline resistance protein signature 144 166 9.9E-12 T 09-03-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RG43_RS15310 941f877beffd9bc430aa3e946905e822 408 Hamap MF_01528 Multidrug resistance protein MdtG [mdtG]. 3 406 49.348 T 09-03-2017 IPR023692 Multidrug resistance protein MdtG GO:0005215|GO:0005886 RG43_RS13115 aaf6c1d5cb4b97b866f9f4107c8bbf5a 439 SUPERFAMILY SSF51445 81 365 9.93E-32 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily RG43_RS13115 aaf6c1d5cb4b97b866f9f4107c8bbf5a 439 Gene3D G3DSA:3.20.20.80 89 239 7.9E-9 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RG43_RS13115 aaf6c1d5cb4b97b866f9f4107c8bbf5a 439 Pfam PF02638 Glycosyl hydrolase-like 10 55 390 9.4E-138 T 09-03-2017 IPR003790 Glycosyl hydrolase-like 10 RG43_RS18120 32f75a0d4eb78bb3720af119ec03a4e3 391 Gene3D G3DSA:3.60.120.10 99 389 1.4E-82 T 09-03-2017 IPR005801 ADC synthase GO:0009058 RG43_RS18120 32f75a0d4eb78bb3720af119ec03a4e3 391 Pfam PF00425 chorismate binding enzyme 126 380 6.6E-69 T 09-03-2017 IPR015890 Chorismate-utilising enzyme, C-terminal RG43_RS18120 32f75a0d4eb78bb3720af119ec03a4e3 391 SUPERFAMILY SSF56322 13 389 5.63E-88 T 09-03-2017 IPR005801 ADC synthase GO:0009058 RG43_RS18120 32f75a0d4eb78bb3720af119ec03a4e3 391 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 98 387 1.2E-84 T 09-03-2017 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 RG43_RS20820 f56b90e203e0f04371e628aafcd74dac 190 SUPERFAMILY SSF49401 27 190 1.54E-12 T 09-03-2017 IPR008966 Adhesion domain RG43_RS20820 f56b90e203e0f04371e628aafcd74dac 190 Pfam PF00419 Fimbrial protein 29 190 2.7E-16 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS20820 f56b90e203e0f04371e628aafcd74dac 190 Gene3D G3DSA:2.60.40.1090 27 190 1.5E-16 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS03835 e0f63aa874b218a4c9d359851efe3e90 71 Pfam PF01165 Ribosomal protein S21 4 56 5.1E-22 T 09-03-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS03835 e0f63aa874b218a4c9d359851efe3e90 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.283 T 09-03-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS03835 e0f63aa874b218a4c9d359851efe3e90 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 56 1.0E-15 T 09-03-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS03835 e0f63aa874b218a4c9d359851efe3e90 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 09-03-2017 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS03835 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 2.8E-17 T 09-03-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS03835 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 2.8E-17 T 09-03-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS03835 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 2.8E-17 T 09-03-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS03835 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 2.8E-17 T 09-03-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS03835 e0f63aa874b218a4c9d359851efe3e90 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 4.1E-24 T 09-03-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS26210 e0f63aa874b218a4c9d359851efe3e90 71 Pfam PF01165 Ribosomal protein S21 4 56 5.1E-22 T 09-03-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS26210 e0f63aa874b218a4c9d359851efe3e90 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.283 T 09-03-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS26210 e0f63aa874b218a4c9d359851efe3e90 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 56 1.0E-15 T 09-03-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS26210 e0f63aa874b218a4c9d359851efe3e90 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 09-03-2017 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RG43_RS26210 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 2.8E-17 T 09-03-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS26210 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 2.8E-17 T 09-03-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS26210 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 2.8E-17 T 09-03-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS26210 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 2.8E-17 T 09-03-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS26210 e0f63aa874b218a4c9d359851efe3e90 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 4.1E-24 T 09-03-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RG43_RS13900 80f9398ec78d7f51d888303374d3524f 185 Pfam PF01381 Helix-turn-helix 13 66 1.9E-14 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RG43_RS13900 80f9398ec78d7f51d888303374d3524f 185 SMART SM00530 11 66 1.1E-14 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RG43_RS13900 80f9398ec78d7f51d888303374d3524f 185 SUPERFAMILY SSF51182 51 183 3.41E-30 T 09-03-2017 IPR011051 RmlC-like cupin domain RG43_RS13900 80f9398ec78d7f51d888303374d3524f 185 Gene3D G3DSA:1.10.260.40 7 74 5.7E-22 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS13900 80f9398ec78d7f51d888303374d3524f 185 Gene3D G3DSA:2.60.120.10 75 183 2.6E-24 T 09-03-2017 IPR014710 RmlC-like jelly roll fold RG43_RS13900 80f9398ec78d7f51d888303374d3524f 185 SUPERFAMILY SSF47413 8 73 2.68E-16 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS13900 80f9398ec78d7f51d888303374d3524f 185 Pfam PF07883 Cupin domain 111 178 1.7E-17 T 09-03-2017 IPR013096 Cupin 2, conserved barrel RG43_RS00690 252fd291be7ca9643cd0014f9def70e3 157 Gene3D G3DSA:3.40.1280.10 1 153 7.6E-71 T 09-03-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RG43_RS00690 252fd291be7ca9643cd0014f9def70e3 157 SUPERFAMILY SSF75217 1 152 4.71E-46 T 09-03-2017 IPR029028 Alpha/beta knot methyltransferases RG43_RS00690 252fd291be7ca9643cd0014f9def70e3 157 Pfam PF00588 SpoU rRNA Methylase family 2 142 8.9E-34 T 09-03-2017 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 RG43_RS00690 252fd291be7ca9643cd0014f9def70e3 157 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 34.452 T 09-03-2017 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 RG43_RS00690 252fd291be7ca9643cd0014f9def70e3 157 PIRSF PIRSF029256 1 154 2.3E-71 T 09-03-2017 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 RG43_RS00690 252fd291be7ca9643cd0014f9def70e3 157 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 153 1.0E-75 T 09-03-2017 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 RG43_RS23295 52258828d5982dfc68a479832f1b944c 449 Pfam PF00860 Permease family 26 409 1.2E-88 T 09-03-2017 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RG43_RS01960 7c853303f9c67d9309bf6d0625a79407 292 PIRSF PIRSF005261 1 285 3.1E-72 T 09-03-2017 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 RG43_RS01960 7c853303f9c67d9309bf6d0625a79407 292 Pfam PF01430 Hsp33 protein 5 272 6.6E-86 T 09-03-2017 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 RG43_RS01960 7c853303f9c67d9309bf6d0625a79407 292 Gene3D G3DSA:3.55.30.10 2 176 5.7E-67 T 09-03-2017 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 RG43_RS01960 7c853303f9c67d9309bf6d0625a79407 292 SUPERFAMILY SSF64397 4 232 2.75E-76 T 09-03-2017 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 RG43_RS01960 7c853303f9c67d9309bf6d0625a79407 292 Gene3D G3DSA:3.90.1280.10 226 283 1.7E-25 T 09-03-2017 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 RG43_RS01960 7c853303f9c67d9309bf6d0625a79407 292 Gene3D G3DSA:1.10.287.480 178 225 6.2E-27 T 09-03-2017 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain RG43_RS01960 7c853303f9c67d9309bf6d0625a79407 292 SUPERFAMILY SSF118352 225 283 3.27E-20 T 09-03-2017 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 RG43_RS01960 7c853303f9c67d9309bf6d0625a79407 292 Hamap MF_00117 33 kDa chaperonin [hslO]. 4 284 33.917 T 09-03-2017 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 RG43_RS23555 e41b19192568efde65e7b2a67cad4ced 135 Pfam PF03610 PTS system fructose IIA component 7 113 2.8E-17 T 09-03-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 RG43_RS23555 e41b19192568efde65e7b2a67cad4ced 135 Gene3D G3DSA:3.40.50.510 1 133 7.0E-37 T 09-03-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 RG43_RS23555 e41b19192568efde65e7b2a67cad4ced 135 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 1 114 2.4E-44 T 09-03-2017 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 RG43_RS23555 e41b19192568efde65e7b2a67cad4ced 135 SUPERFAMILY SSF53062 1 125 2.35E-30 T 09-03-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 RG43_RS20305 700aef229f26a62ec515bf9d27c1476c 77 SUPERFAMILY SSF54786 13 76 1.41E-23 T 09-03-2017 RG43_RS20305 700aef229f26a62ec515bf9d27c1476c 77 ProDom PD028015 PLASMID YKFF YDEA R0111 YPJI YPMT1.60C C4569 AEC70 PSLT067 YFJA 11 73 1.0E-31 T 09-03-2017 IPR009253 Protein of unknown function DUF905 RG43_RS20305 700aef229f26a62ec515bf9d27c1476c 77 Pfam PF06006 Bacterial protein of unknown function (DUF905) 10 73 1.0E-16 T 09-03-2017 IPR009253 Protein of unknown function DUF905 RG43_RS20305 700aef229f26a62ec515bf9d27c1476c 77 Gene3D G3DSA:3.30.160.130 5 77 3.2E-30 T 09-03-2017 RG43_RS16175 7685e403ced062aa096db5195bf558e7 72 SUPERFAMILY SSF50249 1 70 5.36E-29 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS16175 7685e403ced062aa096db5195bf558e7 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 5.1E-39 T 09-03-2017 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 RG43_RS16175 7685e403ced062aa096db5195bf558e7 72 Gene3D G3DSA:2.40.50.140 1 71 6.9E-39 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS16175 7685e403ced062aa096db5195bf558e7 72 SMART SM00316 4 72 2.8E-7 T 09-03-2017 IPR022967 RNA-binding domain, S1 RG43_RS16175 7685e403ced062aa096db5195bf558e7 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 8.4E-28 T 09-03-2017 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 RG43_RS16175 7685e403ced062aa096db5195bf558e7 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.442 T 09-03-2017 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 RG43_RS00205 772989f04404097804646c0404487a6a 462 Pfam PF03611 PTS system sugar-specific permease component 12 408 4.6E-150 T 09-03-2017 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 RG43_RS02110 8c9ee1e9c38e6d6ed9ec582fa09ced15 108 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 106 7.4E-40 T 09-03-2017 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 RG43_RS02110 8c9ee1e9c38e6d6ed9ec582fa09ced15 108 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 3 107 5.3E-41 T 09-03-2017 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 RG43_RS02110 8c9ee1e9c38e6d6ed9ec582fa09ced15 108 SUPERFAMILY SSF50022 1 107 3.93E-35 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RG43_RS02110 8c9ee1e9c38e6d6ed9ec582fa09ced15 108 Gene3D G3DSA:2.102.10.10 2 107 1.8E-40 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RG43_RS00215 dea4148e927c1918111495e298812574 317 SUPERFAMILY SSF52518 10 175 2.41E-36 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS00215 dea4148e927c1918111495e298812574 317 SUPERFAMILY SSF52922 184 317 1.31E-36 T 09-03-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RG43_RS00215 dea4148e927c1918111495e298812574 317 SMART SM00861 13 179 4.8E-24 T 09-03-2017 IPR005475 Transketolase-like, pyrimidine-binding domain RG43_RS00215 dea4148e927c1918111495e298812574 317 Pfam PF02779 Transketolase, pyrimidine binding domain 12 164 8.6E-21 T 09-03-2017 IPR005475 Transketolase-like, pyrimidine-binding domain RG43_RS00215 dea4148e927c1918111495e298812574 317 Pfam PF02780 Transketolase, C-terminal domain 189 309 2.7E-32 T 09-03-2017 IPR033248 Transketolase, C-terminal domain RG43_RS00215 dea4148e927c1918111495e298812574 317 Gene3D G3DSA:3.40.50.970 9 189 3.3E-37 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold RG43_RS00215 dea4148e927c1918111495e298812574 317 Gene3D G3DSA:3.40.50.920 190 317 2.1E-41 T 09-03-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RG43_RS17135 8201b05d2b48b84ab957589cbedb5950 72 SUPERFAMILY SSF46955 1 70 7.23E-23 T 09-03-2017 IPR009061 Putative DNA-binding domain RG43_RS17135 8201b05d2b48b84ab957589cbedb5950 72 Gene3D G3DSA:1.10.1660.20 1 71 3.2E-31 T 09-03-2017 IPR012884 Excisionase-like GO:0003677|GO:0006310 RG43_RS17135 8201b05d2b48b84ab957589cbedb5950 72 Pfam PF07825 Excisionase-like protein 1 72 7.8E-41 T 09-03-2017 IPR012884 Excisionase-like GO:0003677|GO:0006310 RG43_RS19840 1e639d8847539915fc2d01bbfb1a476b 652 SUPERFAMILY SSF52096 7 175 2.2E-47 T 09-03-2017 IPR029045 ClpP/crotonase-like domain RG43_RS19840 1e639d8847539915fc2d01bbfb1a476b 652 Pfam PF00574 Clp protease 23 168 1.8E-36 T 09-03-2017 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA RG43_RS19840 1e639d8847539915fc2d01bbfb1a476b 652 Gene3D G3DSA:3.90.226.10 8 178 2.2E-44 T 09-03-2017 IPR029045 ClpP/crotonase-like domain RG43_RS19840 1e639d8847539915fc2d01bbfb1a476b 652 PRINTS PR00127 Clp protease catalytic subunit P signature 39 59 3.4E-9 T 09-03-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RG43_RS19840 1e639d8847539915fc2d01bbfb1a476b 652 PRINTS PR00127 Clp protease catalytic subunit P signature 70 87 3.4E-9 T 09-03-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RG43_RS19840 1e639d8847539915fc2d01bbfb1a476b 652 PRINTS PR00127 Clp protease catalytic subunit P signature 146 165 3.4E-9 T 09-03-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RG43_RS19840 1e639d8847539915fc2d01bbfb1a476b 652 Pfam PF10124 Mu-like prophage major head subunit gpT 511 584 9.5E-5 T 09-03-2017 IPR018774 Bacteriophage Mu, GpT RG43_RS15975 a165b9a1483ef48e8d6a6958a2d9c239 234 Pfam PF04288 MukE-like family 10 230 8.1E-126 T 09-03-2017 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 RG43_RS15975 a165b9a1483ef48e8d6a6958a2d9c239 234 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 10 234 48.637 T 09-03-2017 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 RG43_RS13845 728c68c9126515a51b4d61e32f0a52a7 430 Pfam PF01547 Bacterial extracellular solute-binding protein 43 325 1.4E-38 T 09-03-2017 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 RG43_RS13845 728c68c9126515a51b4d61e32f0a52a7 430 Gene3D G3DSA:3.40.190.10 149 348 1.9E-42 T 09-03-2017 RG43_RS13845 728c68c9126515a51b4d61e32f0a52a7 430 SUPERFAMILY SSF53850 22 426 1.86E-58 T 09-03-2017 RG43_RS17805 bf23401583b410850baf2635b1fd0b12 359 Gene3D G3DSA:3.40.50.300 131 334 1.3E-89 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS17805 bf23401583b410850baf2635b1fd0b12 359 SUPERFAMILY SSF52540 130 331 2.67E-41 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS17805 bf23401583b410850baf2635b1fd0b12 359 Pfam PF02562 PhoH-like protein 131 334 9.1E-96 T 09-03-2017 IPR003714 PhoH-like protein GO:0005524 RG43_RS04030 82bff003b116fcae9e36381fef9bca70 231 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 18 231 3.0E-30 T 09-03-2017 IPR009331 Oligogalacturonate-specific porin RG43_RS04030 82bff003b116fcae9e36381fef9bca70 231 Gene3D G3DSA:2.40.230.30 19 231 2.4E-43 T 09-03-2017 RG43_RS26405 82bff003b116fcae9e36381fef9bca70 231 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 18 231 3.0E-30 T 09-03-2017 IPR009331 Oligogalacturonate-specific porin RG43_RS26405 82bff003b116fcae9e36381fef9bca70 231 Gene3D G3DSA:2.40.230.30 19 231 2.4E-43 T 09-03-2017 RG43_RS09375 0ed1a50272948ec98a941b78efd331b2 94 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 4 83 1.3E-10 T 09-03-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RG43_RS09375 0ed1a50272948ec98a941b78efd331b2 94 Gene3D G3DSA:3.40.50.270 2 93 2.3E-30 T 09-03-2017 RG43_RS09375 0ed1a50272948ec98a941b78efd331b2 94 SUPERFAMILY SSF52794 3 92 6.93E-17 T 09-03-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RG43_RS17185 3c5c51d602d0e17cec0ae115ca696b48 229 SUPERFAMILY SSF161098 6 220 7.72E-50 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS17185 3c5c51d602d0e17cec0ae115ca696b48 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 26 215 8.1E-22 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS17185 3c5c51d602d0e17cec0ae115ca696b48 229 Gene3D G3DSA:1.10.3720.10 8 226 8.0E-44 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS17185 3c5c51d602d0e17cec0ae115ca696b48 229 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 12 221 2.4E-71 T 09-03-2017 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 RG43_RS25160 6531470e3b97403d9b526fafda407d17 461 Pfam PF00324 Amino acid permease 16 428 1.2E-103 T 09-03-2017 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 RG43_RS25160 6531470e3b97403d9b526fafda407d17 461 ProSitePatterns PS00218 Amino acid permeases signature. 41 71 - T 09-03-2017 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 RG43_RS25160 6531470e3b97403d9b526fafda407d17 461 PIRSF PIRSF006060 1 461 5.9E-66 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RG43_RS00170 ec8d4dbc06f7a30cbbb40660e2eba343 175 PIRSF PIRSF030791 1 163 1.8E-94 T 09-03-2017 IPR016957 Uncharacterised conserved protein UCP030791 RG43_RS00640 0c9731c76b7398b195d6304900b7fb66 344 Gene3D G3DSA:3.90.550.10 3 207 2.0E-52 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS00640 0c9731c76b7398b195d6304900b7fb66 344 Pfam PF00535 Glycosyl transferase family 2 9 137 5.9E-34 T 09-03-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RG43_RS00640 0c9731c76b7398b195d6304900b7fb66 344 SUPERFAMILY SSF53448 7 226 7.41E-52 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS12950 d9f9fcff01f81f123aa3226ac34212b9 340 Gene3D G3DSA:3.40.50.2300 29 149 7.4E-31 T 09-03-2017 RG43_RS12950 d9f9fcff01f81f123aa3226ac34212b9 340 Gene3D G3DSA:3.40.50.2300 150 289 3.9E-32 T 09-03-2017 RG43_RS12950 d9f9fcff01f81f123aa3226ac34212b9 340 SUPERFAMILY SSF53822 27 340 7.46E-85 T 09-03-2017 IPR028082 Periplasmic binding protein-like I RG43_RS12950 d9f9fcff01f81f123aa3226ac34212b9 340 Pfam PF13407 Periplasmic binding protein domain 30 285 3.1E-54 T 09-03-2017 IPR025997 Periplasmic binding protein RG43_RS26380 829ccc807bb107b78bc485e05956cfac 140 Pfam PF06853 Protein of unknown function (DUF1249) 21 134 8.4E-43 T 09-03-2017 IPR009659 Protein of unknown function DUF1249 RG43_RS04005 829ccc807bb107b78bc485e05956cfac 140 Pfam PF06853 Protein of unknown function (DUF1249) 21 134 8.4E-43 T 09-03-2017 IPR009659 Protein of unknown function DUF1249 RG43_RS20895 7a19fc763018cea7a941ca7feb7122bf 220 Gene3D G3DSA:3.40.1050.10 1 216 2.7E-77 T 09-03-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RG43_RS20895 7a19fc763018cea7a941ca7feb7122bf 220 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 09-03-2017 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RG43_RS20895 7a19fc763018cea7a941ca7feb7122bf 220 SMART SM00947 30 192 1.3E-69 T 09-03-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RG43_RS20895 7a19fc763018cea7a941ca7feb7122bf 220 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 09-03-2017 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RG43_RS20895 7a19fc763018cea7a941ca7feb7122bf 220 SUPERFAMILY SSF53056 2 211 3.4E-74 T 09-03-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RG43_RS20895 7a19fc763018cea7a941ca7feb7122bf 220 Pfam PF00484 Carbonic anhydrase 38 187 2.9E-50 T 09-03-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RG43_RS12260 b364e47c26991e4e943e4d21553d6140 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 09-03-2017 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RG43_RS12260 b364e47c26991e4e943e4d21553d6140 470 SUPERFAMILY SSF52935 323 469 9.68E-37 T 09-03-2017 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RG43_RS12260 b364e47c26991e4e943e4d21553d6140 470 Gene3D G3DSA:3.20.20.60 2 72 1.7E-115 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RG43_RS12260 b364e47c26991e4e943e4d21553d6140 470 Gene3D G3DSA:3.20.20.60 169 325 1.7E-115 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RG43_RS12260 b364e47c26991e4e943e4d21553d6140 470 Gene3D G3DSA:3.40.1380.20 326 469 2.7E-48 T 09-03-2017 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RG43_RS12260 b364e47c26991e4e943e4d21553d6140 470 Gene3D G3DSA:2.40.33.10 73 168 8.4E-33 T 09-03-2017 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RG43_RS12260 b364e47c26991e4e943e4d21553d6140 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 1.0E-29 T 09-03-2017 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RG43_RS12260 b364e47c26991e4e943e4d21553d6140 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 1.7E-193 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RG43_RS12260 b364e47c26991e4e943e4d21553d6140 470 SUPERFAMILY SSF51621 1 74 2.09E-100 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RG43_RS12260 b364e47c26991e4e943e4d21553d6140 470 SUPERFAMILY SSF51621 156 340 2.09E-100 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RG43_RS12260 b364e47c26991e4e943e4d21553d6140 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 342 3.0E-151 T 09-03-2017 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RG43_RS12260 b364e47c26991e4e943e4d21553d6140 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 4.3E-77 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RG43_RS12260 b364e47c26991e4e943e4d21553d6140 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 4.3E-77 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RG43_RS12260 b364e47c26991e4e943e4d21553d6140 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 4.3E-77 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RG43_RS12260 b364e47c26991e4e943e4d21553d6140 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 4.3E-77 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RG43_RS12260 b364e47c26991e4e943e4d21553d6140 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 4.3E-77 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RG43_RS12260 b364e47c26991e4e943e4d21553d6140 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 4.3E-77 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RG43_RS12260 b364e47c26991e4e943e4d21553d6140 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 4.3E-77 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RG43_RS12260 b364e47c26991e4e943e4d21553d6140 470 SUPERFAMILY SSF50800 70 166 1.67E-29 T 09-03-2017 IPR011037 Pyruvate kinase-like, insert domain RG43_RS00730 c6deb7847a6f01c74734deeba375556a 195 Pfam PF05068 Mannitol repressor 29 187 1.3E-62 T 09-03-2017 IPR007761 Mannitol repressor RG43_RS00730 c6deb7847a6f01c74734deeba375556a 195 Gene3D G3DSA:1.20.120.330 21 188 1.5E-79 T 09-03-2017 RG43_RS00730 c6deb7847a6f01c74734deeba375556a 195 SUPERFAMILY SSF158668 26 187 6.41E-59 T 09-03-2017 RG43_RS23965 ee84e54c358f960ff5aa22e41fcacca6 577 Gene3D G3DSA:3.40.720.10 240 535 9.8E-14 T 09-03-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RG43_RS23965 ee84e54c358f960ff5aa22e41fcacca6 577 Pfam PF08019 Domain of unknown function (DUF1705) 56 206 5.6E-5 T 09-03-2017 IPR012549 Domain of unknown function DUF1705 GO:0016021 RG43_RS23965 ee84e54c358f960ff5aa22e41fcacca6 577 Pfam PF00884 Sulfatase 238 529 1.6E-46 T 09-03-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RG43_RS23965 ee84e54c358f960ff5aa22e41fcacca6 577 SUPERFAMILY SSF53649 235 554 2.24E-31 T 09-03-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RG43_RS17365 22e5913b054a3e58a4d45c92326663de 371 SMART SM00028 299 332 2.9 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 RG43_RS17365 22e5913b054a3e58a4d45c92326663de 371 SMART SM00028 339 371 91.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 RG43_RS17365 22e5913b054a3e58a4d45c92326663de 371 SMART SM00028 265 298 0.0015 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 RG43_RS17365 22e5913b054a3e58a4d45c92326663de 371 Pfam PF13414 TPR repeat 272 313 1.4E-9 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS17365 22e5913b054a3e58a4d45c92326663de 371 SUPERFAMILY SSF48452 262 366 7.88E-18 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS17365 22e5913b054a3e58a4d45c92326663de 371 Gene3D G3DSA:1.25.40.10 264 366 2.7E-21 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS17365 22e5913b054a3e58a4d45c92326663de 371 Pfam PF13176 Tetratricopeptide repeat 341 368 0.0072 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 RG43_RS15160 34aed229655880045aec5bd7d6ba3927 547 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 492 546 1.3E-7 T 09-03-2017 IPR010930 Flagellar basal-body/hook protein, C-terminal domain RG43_RS15160 34aed229655880045aec5bd7d6ba3927 547 SUPERFAMILY SSF64518 108 545 2.62E-57 T 09-03-2017 RG43_RS15160 34aed229655880045aec5bd7d6ba3927 547 Pfam PF00460 Flagella basal body rod protein 5 35 3.3E-5 T 09-03-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 RG43_RS15160 34aed229655880045aec5bd7d6ba3927 547 PRINTS PR01005 Flagellar hook-associated protein signature 156 180 1.1E-152 T 09-03-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 RG43_RS15160 34aed229655880045aec5bd7d6ba3927 547 PRINTS PR01005 Flagellar hook-associated protein signature 49 71 1.1E-152 T 09-03-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 RG43_RS15160 34aed229655880045aec5bd7d6ba3927 547 PRINTS PR01005 Flagellar hook-associated protein signature 408 425 1.1E-152 T 09-03-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 RG43_RS15160 34aed229655880045aec5bd7d6ba3927 547 PRINTS PR01005 Flagellar hook-associated protein signature 440 459 1.1E-152 T 09-03-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 RG43_RS15160 34aed229655880045aec5bd7d6ba3927 547 PRINTS PR01005 Flagellar hook-associated protein signature 216 234 1.1E-152 T 09-03-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 RG43_RS15160 34aed229655880045aec5bd7d6ba3927 547 PRINTS PR01005 Flagellar hook-associated protein signature 513 537 1.1E-152 T 09-03-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 RG43_RS15160 34aed229655880045aec5bd7d6ba3927 547 PRINTS PR01005 Flagellar hook-associated protein signature 466 487 1.1E-152 T 09-03-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 RG43_RS15160 34aed229655880045aec5bd7d6ba3927 547 PRINTS PR01005 Flagellar hook-associated protein signature 360 382 1.1E-152 T 09-03-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 RG43_RS15160 34aed229655880045aec5bd7d6ba3927 547 PRINTS PR01005 Flagellar hook-associated protein signature 260 282 1.1E-152 T 09-03-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 RG43_RS15160 34aed229655880045aec5bd7d6ba3927 547 PRINTS PR01005 Flagellar hook-associated protein signature 123 143 1.1E-152 T 09-03-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 RG43_RS15160 34aed229655880045aec5bd7d6ba3927 547 PRINTS PR01005 Flagellar hook-associated protein signature 11 34 1.1E-152 T 09-03-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 RG43_RS15160 34aed229655880045aec5bd7d6ba3927 547 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 3 546 1.7E-99 T 09-03-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 RG43_RS17985 20f397a95735142ebb05825c6c566ddc 226 PIRSF PIRSF006171 3 226 1.5E-77 T 09-03-2017 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0001071|GO:0003677|GO:0005737|GO:0009605 RG43_RS17985 20f397a95735142ebb05825c6c566ddc 226 Pfam PF00072 Response regulator receiver domain 8 117 2.6E-19 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS17985 20f397a95735142ebb05825c6c566ddc 226 Pfam PF12431 Transcriptional regulator 135 160 1.7E-8 T 09-03-2017 IPR028141 Transcriptional regulator RG43_RS17985 20f397a95735142ebb05825c6c566ddc 226 Gene3D G3DSA:3.40.50.2300 4 130 2.9E-23 T 09-03-2017 RG43_RS17985 20f397a95735142ebb05825c6c566ddc 226 SUPERFAMILY SSF52172 4 179 4.7E-29 T 09-03-2017 IPR011006 CheY-like superfamily RG43_RS17985 20f397a95735142ebb05825c6c566ddc 226 SMART SM00448 5 118 9.6E-21 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS16995 74d1ad44fa0ac29769d2f573f6e380bc 64 Pfam PF05810 NinF protein 1 22 2.1E-5 T 09-03-2017 IPR008712 NinF RG43_RS04775 c00f72dfcf1778379ed43a9bb1cb4b80 92 Gene3D G3DSA:2.60.40.1090 4 92 2.1E-15 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS04775 c00f72dfcf1778379ed43a9bb1cb4b80 92 SUPERFAMILY SSF49401 6 92 6.96E-15 T 09-03-2017 IPR008966 Adhesion domain RG43_RS04775 c00f72dfcf1778379ed43a9bb1cb4b80 92 Pfam PF00419 Fimbrial protein 5 92 1.0E-7 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS23210 64cd94498d225d7b6c17f8fde2ad1b25 559 Pfam PF00384 Molybdopterin oxidoreductase 1 331 9.6E-89 T 09-03-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS23210 64cd94498d225d7b6c17f8fde2ad1b25 559 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 1 529 1.3E-254 T 09-03-2017 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 RG43_RS23210 64cd94498d225d7b6c17f8fde2ad1b25 559 Gene3D G3DSA:2.40.40.20 369 532 3.1E-43 T 09-03-2017 RG43_RS23210 64cd94498d225d7b6c17f8fde2ad1b25 559 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 459 486 - T 09-03-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 RG43_RS23210 64cd94498d225d7b6c17f8fde2ad1b25 559 Gene3D G3DSA:3.40.50.740 1 14 3.8E-48 T 09-03-2017 RG43_RS23210 64cd94498d225d7b6c17f8fde2ad1b25 559 Gene3D G3DSA:3.40.50.740 222 353 3.8E-48 T 09-03-2017 RG43_RS23210 64cd94498d225d7b6c17f8fde2ad1b25 559 SUPERFAMILY SSF53706 2 407 7.85E-146 T 09-03-2017 RG43_RS23210 64cd94498d225d7b6c17f8fde2ad1b25 559 Gene3D G3DSA:1.20.5.460 533 559 3.5E-19 T 09-03-2017 RG43_RS23210 64cd94498d225d7b6c17f8fde2ad1b25 559 Gene3D G3DSA:3.40.228.10 15 207 6.7E-79 T 09-03-2017 RG43_RS23210 64cd94498d225d7b6c17f8fde2ad1b25 559 SUPERFAMILY SSF50692 409 547 5.65E-41 T 09-03-2017 IPR009010 Aspartate decarboxylase-like domain RG43_RS23210 64cd94498d225d7b6c17f8fde2ad1b25 559 Pfam PF01568 Molydopterin dinucleotide binding domain 420 526 2.1E-26 T 09-03-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RG43_RS23210 64cd94498d225d7b6c17f8fde2ad1b25 559 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 277 294 - T 09-03-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 RG43_RS17450 f68eedfcfc6d7cb1645d8f59453134e6 353 SUPERFAMILY SSF49401 217 353 1.64E-8 T 09-03-2017 IPR008966 Adhesion domain RG43_RS17450 f68eedfcfc6d7cb1645d8f59453134e6 353 Gene3D G3DSA:2.60.40.1090 218 353 4.3E-6 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS17450 f68eedfcfc6d7cb1645d8f59453134e6 353 Pfam PF00419 Fimbrial protein 217 352 2.9E-7 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS21970 ce3887a105070a52b8bf0ccb4d4bc39d 184 SUPERFAMILY SSF56399 12 183 2.13E-54 T 09-03-2017 RG43_RS21970 ce3887a105070a52b8bf0ccb4d4bc39d 184 Pfam PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family 11 175 7.4E-38 T 09-03-2017 IPR002745 Phosphotransferase KptA/Tpt1 GO:0006388|GO:0016772 RG43_RS21970 ce3887a105070a52b8bf0ccb4d4bc39d 184 Hamap MF_00299 Probable RNA 2'-phosphotransferase [kptA]. 8 182 33.46 T 09-03-2017 IPR022928 RNA 2'-phosphotransferase KptA, putative GO:0016773 RG43_RS01245 7531801d19d7c4c6f4c2a7b8765a8baf 274 Gene3D G3DSA:1.10.10.60 194 243 4.1E-14 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS01245 7531801d19d7c4c6f4c2a7b8765a8baf 274 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 194 236 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RG43_RS01245 7531801d19d7c4c6f4c2a7b8765a8baf 274 Gene3D G3DSA:1.10.10.60 145 193 6.5E-4 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS01245 7531801d19d7c4c6f4c2a7b8765a8baf 274 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 209 224 1.4E-6 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RG43_RS01245 7531801d19d7c4c6f4c2a7b8765a8baf 274 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 224 240 1.4E-6 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RG43_RS01245 7531801d19d7c4c6f4c2a7b8765a8baf 274 SUPERFAMILY SSF46689 193 242 2.6E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS01245 7531801d19d7c4c6f4c2a7b8765a8baf 274 SMART SM00342 158 240 2.0E-31 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS01245 7531801d19d7c4c6f4c2a7b8765a8baf 274 Pfam PF12833 Helix-turn-helix domain 164 242 3.3E-16 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS19900 760a291dd30929ad45a2dd5d3341cfc5 192 Pfam PF06576 Protein of unknown function (DUF1133) 1 177 1.3E-100 T 09-03-2017 IPR010557 Protein of unknown function DUF1133 RG43_RS24200 614fdc0be0d8a751b01da05b696025ff 72 Pfam PF04606 Ogr/Delta-like zinc finger 3 49 7.3E-21 T 09-03-2017 IPR007684 Zinc finger, Ogr/Delta-type RG43_RS06090 7ab5de33a2e6b4f7494ab08f32db8348 302 PIRSF PIRSF002936 1 302 6.3E-156 T 09-03-2017 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 RG43_RS06090 7ab5de33a2e6b4f7494ab08f32db8348 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 1.2E-66 T 09-03-2017 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 RG43_RS06090 7ab5de33a2e6b4f7494ab08f32db8348 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 59.592 T 09-03-2017 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 RG43_RS06090 7ab5de33a2e6b4f7494ab08f32db8348 302 SUPERFAMILY SSF52402 6 209 1.85E-75 T 09-03-2017 RG43_RS06090 7ab5de33a2e6b4f7494ab08f32db8348 302 Gene3D G3DSA:3.40.50.620 2 210 2.5E-64 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS06090 7ab5de33a2e6b4f7494ab08f32db8348 302 Gene3D G3DSA:3.40.50.620 244 253 2.5E-64 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS06090 7ab5de33a2e6b4f7494ab08f32db8348 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 2.0E-169 T 09-03-2017 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 RG43_RS09605 44376ff3c3118a1331b2c1d512e6895e 464 Pfam PF13727 CoA-binding domain 65 238 1.1E-38 T 09-03-2017 RG43_RS09605 44376ff3c3118a1331b2c1d512e6895e 464 Pfam PF02397 Bacterial sugar transferase 274 456 2.0E-58 T 09-03-2017 IPR003362 Bacterial sugar transferase RG43_RS09605 44376ff3c3118a1331b2c1d512e6895e 464 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 24 464 1.7E-150 T 09-03-2017 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase RG43_RS09605 44376ff3c3118a1331b2c1d512e6895e 464 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 25 464 1.0E-164 T 09-03-2017 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 RG43_RS24835 ac2c9754009c0175b55045aa01e09970 89 Pfam PF02416 mttA/Hcf106 family 4 55 2.0E-15 T 09-03-2017 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 RG43_RS24835 ac2c9754009c0175b55045aa01e09970 89 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 47 3.8E-21 T 09-03-2017 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 RG43_RS24835 ac2c9754009c0175b55045aa01e09970 89 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 82 25.479 T 09-03-2017 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 RG43_RS00085 bc0bd98c8c2100f7643f70358d4a1810 300 SUPERFAMILY SSF53807 35 292 7.85E-57 T 09-03-2017 RG43_RS00085 bc0bd98c8c2100f7643f70358d4a1810 300 Pfam PF01497 Periplasmic binding protein 40 269 1.1E-30 T 09-03-2017 IPR002491 ABC transporter periplasmic binding domain GO:0005488 RG43_RS00085 bc0bd98c8c2100f7643f70358d4a1810 300 Gene3D G3DSA:3.40.50.1980 21 136 7.0E-31 T 09-03-2017 RG43_RS00085 bc0bd98c8c2100f7643f70358d4a1810 300 Gene3D G3DSA:3.40.50.1980 137 292 4.6E-25 T 09-03-2017 RG43_RS12225 0ee7c44a0410966c1e8c43e963e944ef 495 Pfam PF01458 Uncharacterized protein family (UPF0051) 234 466 8.0E-69 T 09-03-2017 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 RG43_RS12225 0ee7c44a0410966c1e8c43e963e944ef 495 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 21 486 6.7E-194 T 09-03-2017 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 RG43_RS12225 0ee7c44a0410966c1e8c43e963e944ef 495 SUPERFAMILY SSF101960 41 86 4.32E-137 T 09-03-2017 RG43_RS12225 0ee7c44a0410966c1e8c43e963e944ef 495 SUPERFAMILY SSF101960 125 492 4.32E-137 T 09-03-2017 RG43_RS04675 8115b825f35265510df96bb27800eff5 100 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 81 1.1E-22 T 09-03-2017 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS04675 8115b825f35265510df96bb27800eff5 100 Gene3D G3DSA:3.40.120.10 3 81 1.1E-23 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS04675 8115b825f35265510df96bb27800eff5 100 SUPERFAMILY SSF53738 2 81 5.1E-22 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RG43_RS22380 ba2818b601b0d54ce54f094fcaa27f07 184 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 184 6.8E-93 T 09-03-2017 IPR006513 Conserved hypothetical protein CHP01626, YtfJ RG43_RS22380 ba2818b601b0d54ce54f094fcaa27f07 184 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 24 181 3.2E-75 T 09-03-2017 IPR006513 Conserved hypothetical protein CHP01626, YtfJ RG43_RS04395 0256f1ad517e34581d1a27dd025f04fa 560 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 6 552 1.5E-235 T 09-03-2017 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 RG43_RS04395 0256f1ad517e34581d1a27dd025f04fa 560 Pfam PF02652 L-lactate permease 16 550 6.2E-206 T 09-03-2017 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 RG43_RS26770 0256f1ad517e34581d1a27dd025f04fa 560 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 6 552 1.5E-235 T 09-03-2017 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 RG43_RS26770 0256f1ad517e34581d1a27dd025f04fa 560 Pfam PF02652 L-lactate permease 16 550 6.2E-206 T 09-03-2017 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 RG43_RS06995 089355c4e0e0fb17225bad8b4a95607d 397 Gene3D G3DSA:3.30.420.40 79 218 4.7E-25 T 09-03-2017 RG43_RS06995 089355c4e0e0fb17225bad8b4a95607d 397 Gene3D G3DSA:3.30.420.40 219 351 9.0E-39 T 09-03-2017 RG43_RS06995 089355c4e0e0fb17225bad8b4a95607d 397 Gene3D G3DSA:1.10.10.10 9 68 3.2E-8 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS06995 089355c4e0e0fb17225bad8b4a95607d 397 Pfam PF00480 ROK family 116 337 8.8E-32 T 09-03-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 RG43_RS06995 089355c4e0e0fb17225bad8b4a95607d 397 SUPERFAMILY SSF53067 83 353 4.71E-36 T 09-03-2017 RG43_RS06995 089355c4e0e0fb17225bad8b4a95607d 397 SUPERFAMILY SSF46785 10 68 3.49E-8 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS12905 d4f052c1eaa73bec9426d24fcc0d1a29 119 Pfam PF13811 Domain of unknown function (DUF4186) 7 112 4.6E-51 T 09-03-2017 IPR020378 Protein of unknown function DUF4186 RG43_RS12905 d4f052c1eaa73bec9426d24fcc0d1a29 119 ProDom PD076485 YNEG CYTOPLASMIC ECS2130 STY1535 1 114 5.0E-53 T 09-03-2017 IPR020378 Protein of unknown function DUF4186 RG43_RS25570 8acf6908ad3d425ba6ac1b2a78ef56f7 221 SUPERFAMILY SSF56784 4 212 1.19E-44 T 09-03-2017 IPR023214 HAD-like domain RG43_RS25570 8acf6908ad3d425ba6ac1b2a78ef56f7 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 2.0E-5 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RG43_RS25570 8acf6908ad3d425ba6ac1b2a78ef56f7 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 2.0E-5 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RG43_RS25570 8acf6908ad3d425ba6ac1b2a78ef56f7 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 2.0E-5 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RG43_RS25570 8acf6908ad3d425ba6ac1b2a78ef56f7 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 183 6.8E-22 T 09-03-2017 IPR023214 HAD-like domain RG43_RS25570 8acf6908ad3d425ba6ac1b2a78ef56f7 221 Gene3D G3DSA:1.10.150.240 20 85 5.5E-5 T 09-03-2017 IPR023198 Phosphoglycolate phosphatase, domain 2 RG43_RS25570 8acf6908ad3d425ba6ac1b2a78ef56f7 221 Gene3D G3DSA:3.40.50.1000 2 19 1.7E-32 T 09-03-2017 IPR023214 HAD-like domain RG43_RS25570 8acf6908ad3d425ba6ac1b2a78ef56f7 221 Gene3D G3DSA:3.40.50.1000 88 212 1.7E-32 T 09-03-2017 IPR023214 HAD-like domain RG43_RS25570 8acf6908ad3d425ba6ac1b2a78ef56f7 221 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 61 183 2.7E-11 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RG43_RS05305 a1b221e930a1b909bc57d6057389959d 298 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 8 90 3.8E-25 T 09-03-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RG43_RS05305 a1b221e930a1b909bc57d6057389959d 298 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 9 298 6.3E-120 T 09-03-2017 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 RG43_RS05305 a1b221e930a1b909bc57d6057389959d 298 Pfam PF00589 Phage integrase family 113 284 2.6E-56 T 09-03-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RG43_RS05305 a1b221e930a1b909bc57d6057389959d 298 SUPERFAMILY SSF56349 106 296 5.0E-60 T 09-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RG43_RS05305 a1b221e930a1b909bc57d6057389959d 298 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 6 298 58.806 T 09-03-2017 IPR023009 Tyrosine recombinase XerC/XerD RG43_RS05305 a1b221e930a1b909bc57d6057389959d 298 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 4 298 66.874 T 09-03-2017 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 RG43_RS05305 a1b221e930a1b909bc57d6057389959d 298 SUPERFAMILY SSF47823 4 100 8.04E-36 T 09-03-2017 IPR010998 Integrase, Lambda-type, N-terminal RG43_RS05305 a1b221e930a1b909bc57d6057389959d 298 Gene3D G3DSA:1.10.443.10 113 289 7.8E-60 T 09-03-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RG43_RS05305 a1b221e930a1b909bc57d6057389959d 298 Gene3D G3DSA:1.10.150.130 7 99 4.2E-30 T 09-03-2017 IPR023109 Integrase/recombinase, N-terminal RG43_RS12805 38b616c6eef1665d15a0661efb303c4a 67 TIGRFAM TIGR03318 YdfZ_fam: putative selenium-binding protein YdfZ 1 65 3.9E-38 T 09-03-2017 IPR017704 Putative selenium-binding protein YdfZ RG43_RS12805 38b616c6eef1665d15a0661efb303c4a 67 Pfam PF14001 YdfZ protein 3 65 1.1E-33 T 09-03-2017 IPR017704 Putative selenium-binding protein YdfZ RG43_RS14660 d3abc3aa651e346116d83b429bc53455 176 Pfam PF02600 Disulfide bond formation protein DsbB 12 159 2.4E-45 T 09-03-2017 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 RG43_RS14660 d3abc3aa651e346116d83b429bc53455 176 Gene3D G3DSA:1.20.1550.10 1 174 6.7E-71 T 09-03-2017 IPR023380 Disulphide bond formation protein DsbB-like domain RG43_RS14660 d3abc3aa651e346116d83b429bc53455 176 SUPERFAMILY SSF158442 15 160 6.67E-46 T 09-03-2017 RG43_RS14660 d3abc3aa651e346116d83b429bc53455 176 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 7 167 22.803 T 09-03-2017 IPR022920 Disulphide bond formation protein DsbB RG43_RS11255 5e314b5dec9369d3b0ed876ad0e66ed4 251 Pfam PF00005 ABC transporter 20 149 2.7E-28 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS11255 5e314b5dec9369d3b0ed876ad0e66ed4 251 SUPERFAMILY SSF52540 4 215 3.53E-55 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS11255 5e314b5dec9369d3b0ed876ad0e66ed4 251 Gene3D G3DSA:3.40.50.300 3 207 8.9E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS11255 5e314b5dec9369d3b0ed876ad0e66ed4 251 SMART SM00382 29 199 8.6E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS16725 579da4df312700556fdc4b955f97e77e 234 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 230 5.5E-60 T 09-03-2017 RG43_RS18340 520faffd4a03f29e831ca9ea1cde5d64 240 Gene3D G3DSA:3.60.21.10 3 125 1.8E-22 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like RG43_RS18340 520faffd4a03f29e831ca9ea1cde5d64 240 Gene3D G3DSA:3.60.21.10 173 218 1.8E-22 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like RG43_RS18340 520faffd4a03f29e831ca9ea1cde5d64 240 SUPERFAMILY SSF56300 4 239 1.26E-31 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like RG43_RS18340 520faffd4a03f29e831ca9ea1cde5d64 240 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 240 134.056 T 09-03-2017 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 RG43_RS18340 520faffd4a03f29e831ca9ea1cde5d64 240 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 4 203 1.2E-9 T 09-03-2017 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 RG43_RS18340 520faffd4a03f29e831ca9ea1cde5d64 240 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 232 1.0E-117 T 09-03-2017 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 RG43_RS16240 581bc20f5de552d766c61b1c615867b6 299 Pfam PF03956 Membrane protein of unknown function (DUF340) 113 297 7.4E-58 T 09-03-2017 IPR005642 Lysine exporter LysO RG43_RS16240 581bc20f5de552d766c61b1c615867b6 299 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 135 296 7.0E-69 T 09-03-2017 IPR005642 Lysine exporter LysO RG43_RS04800 edb0d5e513e8c467094aa97727c31665 215 Gene3D G3DSA:1.10.10.60 99 141 1.2E-8 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS04800 edb0d5e513e8c467094aa97727c31665 215 SUPERFAMILY SSF46689 93 144 4.48E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS04800 edb0d5e513e8c467094aa97727c31665 215 Pfam PF01527 Transposase 92 146 2.7E-15 T 09-03-2017 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RG43_RS17965 a681313ba1313404e2556ff70a8ea5db 69 SMART SM00357 5 69 3.2E-33 T 09-03-2017 IPR011129 Cold shock protein GO:0003676 RG43_RS17965 a681313ba1313404e2556ff70a8ea5db 69 PIRSF PIRSF002599 1 69 2.5E-26 T 09-03-2017 IPR012156 Cold shock, CspA GO:0003676 RG43_RS17965 a681313ba1313404e2556ff70a8ea5db 69 PRINTS PR00050 Cold shock protein signature 6 21 1.8E-18 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RG43_RS17965 a681313ba1313404e2556ff70a8ea5db 69 PRINTS PR00050 Cold shock protein signature 27 36 1.8E-18 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RG43_RS17965 a681313ba1313404e2556ff70a8ea5db 69 PRINTS PR00050 Cold shock protein signature 42 60 1.8E-18 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RG43_RS17965 a681313ba1313404e2556ff70a8ea5db 69 Gene3D G3DSA:2.40.50.140 4 67 1.6E-32 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS17965 a681313ba1313404e2556ff70a8ea5db 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 1.4E-33 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RG43_RS17965 a681313ba1313404e2556ff70a8ea5db 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 09-03-2017 IPR019844 Cold-shock conserved site RG43_RS17965 a681313ba1313404e2556ff70a8ea5db 69 SUPERFAMILY SSF50249 3 68 5.9E-26 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS00920 3a84b153f4fa2cdb97905cc64a9a14ca 484 SUPERFAMILY SSF53067 2 242 1.21E-73 T 09-03-2017 RG43_RS00920 3a84b153f4fa2cdb97905cc64a9a14ca 484 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 249 435 2.2E-32 T 09-03-2017 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 RG43_RS00920 3a84b153f4fa2cdb97905cc64a9a14ca 484 Gene3D G3DSA:3.30.420.40 1 240 1.7E-69 T 09-03-2017 RG43_RS00920 3a84b153f4fa2cdb97905cc64a9a14ca 484 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 240 5.7E-88 T 09-03-2017 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 RG43_RS00920 3a84b153f4fa2cdb97905cc64a9a14ca 484 Gene3D G3DSA:3.30.420.40 243 482 2.0E-54 T 09-03-2017 RG43_RS00920 3a84b153f4fa2cdb97905cc64a9a14ca 484 PIRSF PIRSF000538 1 484 1.2E-138 T 09-03-2017 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 RG43_RS00920 3a84b153f4fa2cdb97905cc64a9a14ca 484 TIGRFAM TIGR01312 XylB: xylulokinase 3 477 4.0E-196 T 09-03-2017 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 RG43_RS00920 3a84b153f4fa2cdb97905cc64a9a14ca 484 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 126 138 - T 09-03-2017 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 RG43_RS00920 3a84b153f4fa2cdb97905cc64a9a14ca 484 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 347 367 - T 09-03-2017 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 RG43_RS00920 3a84b153f4fa2cdb97905cc64a9a14ca 484 SUPERFAMILY SSF53067 242 482 1.07E-62 T 09-03-2017 RG43_RS09410 76768877bd441f360e5a55640efee14e 453 Pfam PF16325 Peptidase family U32 C-terminal domain 359 440 2.4E-21 T 09-03-2017 IPR032525 Peptidase family U32, C-terminal RG43_RS09410 76768877bd441f360e5a55640efee14e 453 ProSitePatterns PS01276 Peptidase family U32 signature. 162 180 - T 09-03-2017 IPR001539 Peptidase U32 GO:0006508|GO:0008233 RG43_RS09410 76768877bd441f360e5a55640efee14e 453 Pfam PF01136 Peptidase family U32 75 343 4.9E-97 T 09-03-2017 IPR001539 Peptidase U32 GO:0006508|GO:0008233 RG43_RS08100 61d8c4d65ca24b5aff0878fa0dad270a 156 Pfam PF00419 Fimbrial protein 21 156 1.3E-17 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS08100 61d8c4d65ca24b5aff0878fa0dad270a 156 Gene3D G3DSA:2.60.40.1090 19 156 1.1E-9 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS08100 61d8c4d65ca24b5aff0878fa0dad270a 156 SUPERFAMILY SSF49401 29 156 1.64E-21 T 09-03-2017 IPR008966 Adhesion domain RG43_RS15945 a8099ba001685912c50bf85f88d040b6 215 SUPERFAMILY SSF56281 2 209 7.85E-61 T 09-03-2017 IPR001279 Metallo-beta-lactamase RG43_RS15945 a8099ba001685912c50bf85f88d040b6 215 SMART SM00849 12 192 2.1E-43 T 09-03-2017 IPR001279 Metallo-beta-lactamase RG43_RS15945 a8099ba001685912c50bf85f88d040b6 215 Pfam PF00753 Metallo-beta-lactamase superfamily 10 192 8.3E-33 T 09-03-2017 IPR001279 Metallo-beta-lactamase RG43_RS15945 a8099ba001685912c50bf85f88d040b6 215 Gene3D G3DSA:3.60.15.10 2 210 4.5E-67 T 09-03-2017 IPR001279 Metallo-beta-lactamase RG43_RS03275 ae8d8ae5410f0dcadf379fdb7919a3b3 384 Gene3D G3DSA:3.40.50.10490 12 194 1.9E-68 T 09-03-2017 RG43_RS03275 ae8d8ae5410f0dcadf379fdb7919a3b3 384 Gene3D G3DSA:3.40.50.10490 199 376 8.8E-52 T 09-03-2017 RG43_RS03275 ae8d8ae5410f0dcadf379fdb7919a3b3 384 SUPERFAMILY SSF53697 15 373 1.78E-52 T 09-03-2017 RG43_RS03275 ae8d8ae5410f0dcadf379fdb7919a3b3 384 Pfam PF01380 SIS domain 48 188 2.0E-30 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 RG43_RS03275 ae8d8ae5410f0dcadf379fdb7919a3b3 384 Pfam PF01380 SIS domain 222 357 6.5E-23 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 RG43_RS03275 ae8d8ae5410f0dcadf379fdb7919a3b3 384 TIGRFAM TIGR02815 agaS_fam: putative sugar isomerase, AgaS family 13 382 1.5E-190 T 09-03-2017 IPR014180 Sugar isomerase, AgaS GO:0016861 RG43_RS24895 3aad87ff97e202f837859b5d857c39e6 287 Pfam PF01738 Dienelactone hydrolase family 60 283 7.2E-78 T 09-03-2017 IPR002925 Dienelactone hydrolase GO:0016787 RG43_RS24895 3aad87ff97e202f837859b5d857c39e6 287 SUPERFAMILY SSF53474 51 282 4.46E-49 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS24895 3aad87ff97e202f837859b5d857c39e6 287 Gene3D G3DSA:3.40.50.1820 52 282 5.2E-71 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS03195 d1085cd555e31f30dc7869b9c267bdd5 167 SUPERFAMILY SSF55729 1 163 9.78E-25 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS03195 d1085cd555e31f30dc7869b9c267bdd5 167 Pfam PF13508 Acetyltransferase (GNAT) domain 44 123 2.4E-10 T 09-03-2017 IPR000182 GNAT domain GO:0008080 RG43_RS03195 d1085cd555e31f30dc7869b9c267bdd5 167 Gene3D G3DSA:3.40.630.30 17 127 6.0E-19 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS13355 e7ee53c8ce3b3cee26edca768f288949 73 Pfam PF10753 Protein of unknown function (DUF2566) 20 73 2.3E-27 T 09-03-2017 IPR019689 Toxin GhoT/OrtT RG43_RS12860 c7fc84e77cd5622f8d9c161a819d9854 299 SUPERFAMILY SSF103481 201 287 7.06E-8 T 09-03-2017 RG43_RS12860 c7fc84e77cd5622f8d9c161a819d9854 299 SUPERFAMILY SSF103481 42 132 3.14E-11 T 09-03-2017 RG43_RS12860 c7fc84e77cd5622f8d9c161a819d9854 299 Pfam PF00892 EamA-like transporter family 7 130 7.6E-14 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 RG43_RS12860 c7fc84e77cd5622f8d9c161a819d9854 299 Pfam PF00892 EamA-like transporter family 143 286 2.5E-14 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 RG43_RS07320 33d2782f808a2de18f9552f2ad220a60 429 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 329 349 - T 09-03-2017 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 RG43_RS07320 33d2782f808a2de18f9552f2ad220a60 429 Pfam PF00860 Permease family 16 382 1.4E-108 T 09-03-2017 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RG43_RS07320 33d2782f808a2de18f9552f2ad220a60 429 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 11 405 9.3E-132 T 09-03-2017 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 RG43_RS09850 09a0f6ded4e9199676621c48b1b3c0a7 64 ProDom PD054142 YEEW L0008-LIKE GENOME ECS4540 C4577 AEC77 ECS1407 Z5092 C1289 L0008 1 64 6.0E-31 T 09-03-2017 RG43_RS18270 ef300b6b8a4cc58abca0f0921f856baa 745 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 524 628 1.0E-17 T 09-03-2017 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 RG43_RS18270 ef300b6b8a4cc58abca0f0921f856baa 745 SUPERFAMILY SSF160246 485 623 2.04E-25 T 09-03-2017 RG43_RS18270 ef300b6b8a4cc58abca0f0921f856baa 745 SUPERFAMILY SSF53448 71 401 1.01E-14 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS18270 ef300b6b8a4cc58abca0f0921f856baa 745 Pfam PF13632 Glycosyl transferase family group 2 165 381 2.1E-45 T 09-03-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RG43_RS25930 f3b57c882ac480d933ec9c5489846e82 272 Pfam PF06067 Domain of unknown function (DUF932) 37 261 1.3E-53 T 09-03-2017 IPR026325 Protein of unknown function DUF932 RG43_RS24975 65d1a2cb3fa727362bda858ca95f5fe0 299 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 273 4.0E-93 T 09-03-2017 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 RG43_RS24975 65d1a2cb3fa727362bda858ca95f5fe0 299 Pfam PF00892 EamA-like transporter family 139 274 4.6E-12 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 RG43_RS24975 65d1a2cb3fa727362bda858ca95f5fe0 299 Pfam PF00892 EamA-like transporter family 2 128 9.0E-8 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 RG43_RS24975 65d1a2cb3fa727362bda858ca95f5fe0 299 SUPERFAMILY SSF103481 199 278 1.57E-9 T 09-03-2017 RG43_RS24975 65d1a2cb3fa727362bda858ca95f5fe0 299 SUPERFAMILY SSF103481 35 131 4.45E-6 T 09-03-2017 RG43_RS08385 dadb23aca088493e208ad39c45dda147 184 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 17 157 3.0E-33 T 09-03-2017 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS24440 79eddf006cd6d225a857d6375d591d63 232 Gene3D G3DSA:1.10.10.10 130 229 4.3E-28 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS24440 79eddf006cd6d225a857d6375d591d63 232 Pfam PF00072 Response regulator receiver domain 4 112 4.4E-29 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS24440 79eddf006cd6d225a857d6375d591d63 232 SMART SM00448 2 111 1.2E-45 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS24440 79eddf006cd6d225a857d6375d591d63 232 SUPERFAMILY SSF52172 2 188 6.69E-42 T 09-03-2017 IPR011006 CheY-like superfamily RG43_RS24440 79eddf006cd6d225a857d6375d591d63 232 SMART SM00862 152 228 9.7E-23 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RG43_RS24440 79eddf006cd6d225a857d6375d591d63 232 Gene3D G3DSA:3.40.50.2300 2 126 3.6E-41 T 09-03-2017 RG43_RS24440 79eddf006cd6d225a857d6375d591d63 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 228 1.5E-21 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RG43_RS24020 2c2ccf6950cc97b14e7e7110b72fd0c0 205 Pfam PF06940 Domain of unknown function (DUF1287) 41 202 4.6E-70 T 09-03-2017 IPR009706 Protein of unknown function DUF1287 RG43_RS24020 2c2ccf6950cc97b14e7e7110b72fd0c0 205 ProDom PD357862 YIJF PERIPLASMIC ECS4873 PRECURSOR CC1379 SIGNAL DOMAIN PM0035 31 202 4.0E-98 T 09-03-2017 IPR009706 Protein of unknown function DUF1287 RG43_RS24020 2c2ccf6950cc97b14e7e7110b72fd0c0 205 PIRSF PIRSF011444 1 205 4.5E-96 T 09-03-2017 IPR009706 Protein of unknown function DUF1287 RG43_RS22570 42afe8b1c375cdac4eaeab1bccd17464 249 Gene3D G3DSA:3.40.50.1820 2 249 1.1E-50 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS22570 42afe8b1c375cdac4eaeab1bccd17464 249 SUPERFAMILY SSF53474 9 249 1.13E-37 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS22570 42afe8b1c375cdac4eaeab1bccd17464 249 Pfam PF00326 Prolyl oligopeptidase family 86 234 9.6E-11 T 09-03-2017 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 RG43_RS00885 c94f5ec5227d216258e5d7d3688492fe 676 SMART SM00642 193 637 1.4E-83 T 09-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RG43_RS00885 c94f5ec5227d216258e5d7d3688492fe 676 SUPERFAMILY SSF51445 374 643 8.22E-73 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily RG43_RS00885 c94f5ec5227d216258e5d7d3688492fe 676 SUPERFAMILY SSF51445 178 318 8.22E-73 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily RG43_RS00885 c94f5ec5227d216258e5d7d3688492fe 676 PIRSF PIRSF036917 1 676 0.0 T 09-03-2017 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 RG43_RS00885 c94f5ec5227d216258e5d7d3688492fe 676 Pfam PF00128 Alpha amylase, catalytic domain 226 595 7.7E-36 T 09-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RG43_RS00885 c94f5ec5227d216258e5d7d3688492fe 676 Gene3D G3DSA:3.20.20.80 183 645 4.4E-86 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RG43_RS25390 6ae449327b7c7dbc63f437315dd5019b 139 Pfam PF05025 RbsD / FucU transport protein family 1 138 2.3E-48 T 09-03-2017 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 RG43_RS25390 6ae449327b7c7dbc63f437315dd5019b 139 Gene3D G3DSA:3.40.1650.10 1 139 5.6E-45 T 09-03-2017 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 RG43_RS25390 6ae449327b7c7dbc63f437315dd5019b 139 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 139 33.417 T 09-03-2017 IPR023064 D-ribose pyranase GO:0016872 RG43_RS25390 6ae449327b7c7dbc63f437315dd5019b 139 SUPERFAMILY SSF102546 1 139 7.98E-45 T 09-03-2017 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 RG43_RS23520 b27dd7db316ffeb6a91464fc033cd01c 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 338 359 2.0E-55 T 09-03-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS23520 b27dd7db316ffeb6a91464fc033cd01c 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 150 169 2.0E-55 T 09-03-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS23520 b27dd7db316ffeb6a91464fc033cd01c 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 497 510 2.0E-55 T 09-03-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS23520 b27dd7db316ffeb6a91464fc033cd01c 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 483 497 2.0E-55 T 09-03-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS23520 b27dd7db316ffeb6a91464fc033cd01c 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 261 279 2.0E-55 T 09-03-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS23520 b27dd7db316ffeb6a91464fc033cd01c 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 465 483 2.0E-55 T 09-03-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS23520 b27dd7db316ffeb6a91464fc033cd01c 549 Gene3D G3DSA:1.10.1390.10 511 548 6.8E-23 T 09-03-2017 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS23520 b27dd7db316ffeb6a91464fc033cd01c 549 SUPERFAMILY SSF53697 5 548 1.33E-229 T 09-03-2017 RG43_RS23520 b27dd7db316ffeb6a91464fc033cd01c 549 Gene3D G3DSA:3.40.50.10490 99 290 1.1E-92 T 09-03-2017 RG43_RS23520 b27dd7db316ffeb6a91464fc033cd01c 549 Gene3D G3DSA:3.40.50.10490 8 98 6.7E-149 T 09-03-2017 RG43_RS23520 b27dd7db316ffeb6a91464fc033cd01c 549 Gene3D G3DSA:3.40.50.10490 293 510 6.7E-149 T 09-03-2017 RG43_RS23520 b27dd7db316ffeb6a91464fc033cd01c 549 Pfam PF00342 Phosphoglucose isomerase 52 541 8.8E-259 T 09-03-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS23520 b27dd7db316ffeb6a91464fc033cd01c 549 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 265 278 - T 09-03-2017 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS23520 b27dd7db316ffeb6a91464fc033cd01c 549 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 46 524 43.344 T 09-03-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS23520 b27dd7db316ffeb6a91464fc033cd01c 549 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 497 514 - T 09-03-2017 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS02990 8f27ec0d780bfc7bb9f01b24673b9a1a 260 Pfam PF02405 Permease MlaE 44 256 5.5E-73 T 09-03-2017 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 RG43_RS02990 8f27ec0d780bfc7bb9f01b24673b9a1a 260 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 5 258 5.4E-107 T 09-03-2017 IPR003453 ABC transport permease subunit MlaE, Proteobacteria RG43_RS16830 985dcdee9e9646495dac7b7e0a8ad798 193 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 72 191 1.1E-37 T 09-03-2017 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly RG43_RS23490 60703ed43b255e006d148e32d78d30ea 136 PIRSF PIRSF029598 1 136 1.7E-53 T 09-03-2017 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 RG43_RS23490 60703ed43b255e006d148e32d78d30ea 136 Hamap MF_01048 Protein PsiE [psiE]. 3 136 25.437 T 09-03-2017 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 RG43_RS23490 60703ed43b255e006d148e32d78d30ea 136 Pfam PF06146 Phosphate-starvation-inducible E 63 123 1.6E-16 T 09-03-2017 IPR020948 Phosphate-starvation-induced PsiE-like RG43_RS15565 bc2458c0b8bfc59e4332cf99f613a2bc 199 Hamap MF_01150 Chaperone protein TorD [torD]. 1 199 31.118 T 09-03-2017 IPR023069 Chaperone TorD RG43_RS15565 bc2458c0b8bfc59e4332cf99f613a2bc 199 Gene3D G3DSA:1.10.3480.10 4 195 1.7E-34 T 09-03-2017 IPR020945 DMSO/Nitrate reductase chaperone RG43_RS15565 bc2458c0b8bfc59e4332cf99f613a2bc 199 SUPERFAMILY SSF89155 7 197 4.45E-42 T 09-03-2017 IPR020945 DMSO/Nitrate reductase chaperone RG43_RS15565 bc2458c0b8bfc59e4332cf99f613a2bc 199 Pfam PF02613 Nitrate reductase delta subunit 49 169 2.8E-23 T 09-03-2017 IPR020945 DMSO/Nitrate reductase chaperone RG43_RS08565 c659ab30d798f4f52cbcd308c037e191 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 311 317 3.2E-23 T 09-03-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 RG43_RS08565 c659ab30d798f4f52cbcd308c037e191 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 9 21 3.2E-23 T 09-03-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 RG43_RS08565 c659ab30d798f4f52cbcd308c037e191 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 82 94 3.2E-23 T 09-03-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 RG43_RS08565 c659ab30d798f4f52cbcd308c037e191 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 38 50 3.2E-23 T 09-03-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 RG43_RS08565 c659ab30d798f4f52cbcd308c037e191 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 359 3.2E-23 T 09-03-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 RG43_RS08565 c659ab30d798f4f52cbcd308c037e191 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 22 32 3.2E-23 T 09-03-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 RG43_RS08565 c659ab30d798f4f52cbcd308c037e191 542 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 352 362 - T 09-03-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 RG43_RS08565 c659ab30d798f4f52cbcd308c037e191 542 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 14 31 - T 09-03-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 RG43_RS08565 c659ab30d798f4f52cbcd308c037e191 542 Pfam PF04324 BFD-like [2Fe-2S] binding domain 432 484 6.2E-10 T 09-03-2017 IPR007419 BFD-like [2Fe-2S]-binding domain RG43_RS08565 c659ab30d798f4f52cbcd308c037e191 542 SUPERFAMILY SSF51905 9 322 3.54E-44 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS08565 c659ab30d798f4f52cbcd308c037e191 542 Gene3D G3DSA:3.50.50.60 7 241 3.2E-42 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS08565 c659ab30d798f4f52cbcd308c037e191 542 Pfam PF01266 FAD dependent oxidoreductase 10 358 8.0E-51 T 09-03-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RG43_RS08565 c659ab30d798f4f52cbcd308c037e191 542 TIGRFAM TIGR03377 glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit 10 539 5.1E-266 T 09-03-2017 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit GO:0004368|GO:0005886|GO:0010181|GO:0046174|GO:0050660|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RG43_RS10005 9720199887c7e9394a8bbda2cb391c46 285 Gene3D G3DSA:1.10.10.60 118 154 1.3E-4 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS10005 9720199887c7e9394a8bbda2cb391c46 285 Pfam PF01610 Transposase 6 105 2.8E-11 T 09-03-2017 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RG43_RS17370 952a12588809478949035bbbb8605308 289 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.3E-39 T 09-03-2017 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RG43_RS17370 952a12588809478949035bbbb8605308 289 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.3E-39 T 09-03-2017 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RG43_RS17370 952a12588809478949035bbbb8605308 289 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.3E-39 T 09-03-2017 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RG43_RS17370 952a12588809478949035bbbb8605308 289 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.3E-39 T 09-03-2017 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RG43_RS17370 952a12588809478949035bbbb8605308 289 Gene3D G3DSA:3.40.50.720 2 119 2.2E-56 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS17370 952a12588809478949035bbbb8605308 289 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 09-03-2017 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RG43_RS17370 952a12588809478949035bbbb8605308 289 Pfam PF02629 CoA binding domain 6 99 2.3E-31 T 09-03-2017 IPR003781 CoA-binding GO:0048037 RG43_RS17370 952a12588809478949035bbbb8605308 289 SUPERFAMILY SSF52210 123 288 4.97E-57 T 09-03-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 RG43_RS17370 952a12588809478949035bbbb8605308 289 Pfam PF00549 CoA-ligase 151 271 4.8E-20 T 09-03-2017 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 RG43_RS17370 952a12588809478949035bbbb8605308 289 PIRSF PIRSF001553 1 289 8.1E-136 T 09-03-2017 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RG43_RS17370 952a12588809478949035bbbb8605308 289 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 09-03-2017 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site RG43_RS17370 952a12588809478949035bbbb8605308 289 Gene3D G3DSA:3.40.50.261 120 287 2.6E-78 T 09-03-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 RG43_RS17370 952a12588809478949035bbbb8605308 289 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 288 5.1E-146 T 09-03-2017 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RG43_RS17370 952a12588809478949035bbbb8605308 289 SUPERFAMILY SSF51735 1 122 1.08E-43 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS17370 952a12588809478949035bbbb8605308 289 SMART SM00881 4 100 2.2E-37 T 09-03-2017 IPR003781 CoA-binding GO:0048037 RG43_RS11215 c4dc1103fa78109f5201fe14b0ad578b 160 SUPERFAMILY SSF55811 15 154 7.04E-23 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 RG43_RS11215 c4dc1103fa78109f5201fe14b0ad578b 160 Gene3D G3DSA:3.90.79.10 12 156 1.4E-28 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 RG43_RS11215 c4dc1103fa78109f5201fe14b0ad578b 160 Pfam PF00293 NUDIX domain 18 154 1.4E-17 T 09-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 RG43_RS11215 c4dc1103fa78109f5201fe14b0ad578b 160 ProSitePatterns PS00893 Nudix box signature. 51 72 - T 09-03-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RG43_RS11215 c4dc1103fa78109f5201fe14b0ad578b 160 PRINTS PR01404 DATP pyrophosphohydrolase signature 84 103 1.5E-55 T 09-03-2017 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 RG43_RS11215 c4dc1103fa78109f5201fe14b0ad578b 160 PRINTS PR01404 DATP pyrophosphohydrolase signature 33 54 1.5E-55 T 09-03-2017 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 RG43_RS11215 c4dc1103fa78109f5201fe14b0ad578b 160 PRINTS PR01404 DATP pyrophosphohydrolase signature 16 33 1.5E-55 T 09-03-2017 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 RG43_RS11215 c4dc1103fa78109f5201fe14b0ad578b 160 PRINTS PR01404 DATP pyrophosphohydrolase signature 139 152 1.5E-55 T 09-03-2017 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 RG43_RS11215 c4dc1103fa78109f5201fe14b0ad578b 160 PRINTS PR01404 DATP pyrophosphohydrolase signature 112 133 1.5E-55 T 09-03-2017 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 RG43_RS23585 2ad1e07b049baa236cacec426fe168ce 229 Pfam PF03575 Peptidase family S51 3 205 3.8E-62 T 09-03-2017 IPR005320 Peptidase S51 GO:0006508|GO:0008236 RG43_RS23585 2ad1e07b049baa236cacec426fe168ce 229 SUPERFAMILY SSF52317 1 220 9.16E-43 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like RG43_RS23585 2ad1e07b049baa236cacec426fe168ce 229 Gene3D G3DSA:3.40.50.880 1 227 4.5E-77 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like RG43_RS23585 2ad1e07b049baa236cacec426fe168ce 229 Hamap MF_00510 Peptidase E [pepE]. 1 215 48.775 T 09-03-2017 IPR023172 Peptidase S51, dipeptidase E GO:0016805 RG43_RS08710 a9540d5009929883b6829a695cbc7222 351 SUPERFAMILY SSF143631 34 346 3.92E-94 T 09-03-2017 IPR003374 ApbE-like domain RG43_RS08710 a9540d5009929883b6829a695cbc7222 351 Pfam PF02424 ApbE family 42 325 4.5E-79 T 09-03-2017 IPR024932 Flavin transferase ApbE GO:0017013 RG43_RS08710 a9540d5009929883b6829a695cbc7222 351 PIRSF PIRSF006268 2 347 1.6E-89 T 09-03-2017 IPR024932 Flavin transferase ApbE GO:0017013 RG43_RS09630 2b2cb910f8a0b8341691d960f2e777ca 464 SUPERFAMILY SSF51126 44 350 8.73E-21 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor RG43_RS09630 2b2cb910f8a0b8341691d960f2e777ca 464 Gene3D G3DSA:2.160.20.10 54 349 3.8E-5 T 09-03-2017 IPR012334 Pectin lyase fold RG43_RS09630 2b2cb910f8a0b8341691d960f2e777ca 464 TIGRFAM TIGR04004 WcaM: colanic acid biosynthesis protein WcaM 3 462 5.4E-293 T 09-03-2017 IPR023882 Colanic acid biosynthesis WcaM RG43_RS11905 1458e7dd952aaa80f307f2e8d2329163 161 Pfam PF07813 LTXXQ motif family protein 46 141 1.0E-23 T 09-03-2017 IPR012899 LTXXQ motif family protein GO:0042597 RG43_RS11905 1458e7dd952aaa80f307f2e8d2329163 161 PIRSF PIRSF034445 1 152 2.9E-30 T 09-03-2017 IPR012899 LTXXQ motif family protein GO:0042597 RG43_RS01310 eee3b0b569d3bd261eef1ba8f649dd1b 207 Pfam PF13460 NAD(P)H-binding 9 190 5.7E-36 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS01310 eee3b0b569d3bd261eef1ba8f649dd1b 207 SUPERFAMILY SSF51735 5 202 1.32E-30 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS01310 eee3b0b569d3bd261eef1ba8f649dd1b 207 Gene3D G3DSA:3.40.50.720 4 202 5.1E-33 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS06865 6a47864645205b02d31d4491088179b7 318 Pfam PF03888 MucB/RseB N-terminal domain 28 197 8.7E-62 T 09-03-2017 IPR033434 MucB/RseB, N-terminal RG43_RS06865 6a47864645205b02d31d4491088179b7 318 PIRSF PIRSF005427 1 318 1.9E-102 T 09-03-2017 IPR005588 MucB/RseB RG43_RS06865 6a47864645205b02d31d4491088179b7 318 Pfam PF17188 MucB/RseB C-terminal domain 217 313 2.0E-29 T 09-03-2017 IPR033436 MucB/RseB, C-terminal RG43_RS06865 6a47864645205b02d31d4491088179b7 318 Gene3D G3DSA:2.50.20.10 41 193 7.3E-8 T 09-03-2017 RG43_RS07350 c431ab61e0ddc8579810ce6d355caa2d 190 Pfam PF13740 ACT domain 7 82 5.0E-26 T 09-03-2017 RG43_RS07350 c431ab61e0ddc8579810ce6d355caa2d 190 Gene3D G3DSA:3.30.70.260 6 84 2.2E-32 T 09-03-2017 RG43_RS07350 c431ab61e0ddc8579810ce6d355caa2d 190 SUPERFAMILY SSF55021 91 179 1.53E-17 T 09-03-2017 RG43_RS07350 c431ab61e0ddc8579810ce6d355caa2d 190 Gene3D G3DSA:3.30.70.260 92 188 4.2E-46 T 09-03-2017 RG43_RS07350 c431ab61e0ddc8579810ce6d355caa2d 190 SUPERFAMILY SSF55021 6 88 9.99E-17 T 09-03-2017 RG43_RS07350 c431ab61e0ddc8579810ce6d355caa2d 190 Pfam PF01842 ACT domain 97 166 3.9E-7 T 09-03-2017 IPR002912 ACT domain GO:0008152|GO:0016597 RG43_RS07350 c431ab61e0ddc8579810ce6d355caa2d 190 PIRSF PIRSF028103 5 180 1.2E-72 T 09-03-2017 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 RG43_RS13770 5fdfdb4845f8301dd5488a9b1558eb14 321 Gene3D G3DSA:3.30.390.10 1 103 2.3E-45 T 09-03-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RG43_RS13770 5fdfdb4845f8301dd5488a9b1558eb14 321 SMART SM00922 130 223 2.7E-18 T 09-03-2017 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RG43_RS13770 5fdfdb4845f8301dd5488a9b1558eb14 321 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 1 112 1.3E-31 T 09-03-2017 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain RG43_RS13770 5fdfdb4845f8301dd5488a9b1558eb14 321 Gene3D G3DSA:3.20.20.120 117 319 1.2E-61 T 09-03-2017 IPR029065 Enolase C-terminal domain-like RG43_RS13770 5fdfdb4845f8301dd5488a9b1558eb14 321 SUPERFAMILY SSF54826 3 112 2.83E-32 T 09-03-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RG43_RS13770 5fdfdb4845f8301dd5488a9b1558eb14 321 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 173 204 - T 09-03-2017 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 RG43_RS13770 5fdfdb4845f8301dd5488a9b1558eb14 321 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 87 112 - T 09-03-2017 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 RG43_RS13770 5fdfdb4845f8301dd5488a9b1558eb14 321 SUPERFAMILY SSF51604 116 310 1.7E-51 T 09-03-2017 IPR029065 Enolase C-terminal domain-like RG43_RS13770 5fdfdb4845f8301dd5488a9b1558eb14 321 Pfam PF13378 Enolase C-terminal domain-like 133 318 6.1E-26 T 09-03-2017 IPR029065 Enolase C-terminal domain-like RG43_RS09415 ae74ffa7ae467bdf80aa7c890f9938ae 92 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 2 84 3.5E-12 T 09-03-2017 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family RG43_RS04045 7777eb0ea6a64b80d499d11234a48d15 332 Gene3D G3DSA:3.40.50.10490 43 170 6.7E-14 T 09-03-2017 RG43_RS04045 7777eb0ea6a64b80d499d11234a48d15 332 SUPERFAMILY SSF53697 16 249 1.81E-25 T 09-03-2017 RG43_RS04045 7777eb0ea6a64b80d499d11234a48d15 332 Pfam PF01380 SIS domain 48 161 1.8E-7 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 RG43_RS26420 7777eb0ea6a64b80d499d11234a48d15 332 Gene3D G3DSA:3.40.50.10490 43 170 6.7E-14 T 09-03-2017 RG43_RS26420 7777eb0ea6a64b80d499d11234a48d15 332 SUPERFAMILY SSF53697 16 249 1.81E-25 T 09-03-2017 RG43_RS26420 7777eb0ea6a64b80d499d11234a48d15 332 Pfam PF01380 SIS domain 48 161 1.8E-7 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 RG43_RS18875 34aa09cdfac010e88f5927be8412ffd2 196 Gene3D G3DSA:3.40.50.880 2 188 8.5E-58 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like RG43_RS18875 34aa09cdfac010e88f5927be8412ffd2 196 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 5 183 1.1E-66 T 09-03-2017 IPR006287 Protein deglycase DJ-1 GO:0006517|GO:0030091 RG43_RS18875 34aa09cdfac010e88f5927be8412ffd2 196 Pfam PF01965 DJ-1/PfpI family 4 170 4.7E-47 T 09-03-2017 IPR002818 DJ-1/PfpI RG43_RS18875 34aa09cdfac010e88f5927be8412ffd2 196 SUPERFAMILY SSF52317 5 188 2.38E-46 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like RG43_RS11920 89843ac59e6e89a6067ae01274f7fd9e 275 Pfam PF02540 NAD synthase 23 265 3.0E-81 T 09-03-2017 IPR022310 NAD/GMP synthase RG43_RS11920 89843ac59e6e89a6067ae01274f7fd9e 275 TIGRFAM TIGR00552 nadE: NAD+ synthetase 16 275 6.6E-88 T 09-03-2017 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 RG43_RS11920 89843ac59e6e89a6067ae01274f7fd9e 275 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 17 268 31.643 T 09-03-2017 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 RG43_RS11920 89843ac59e6e89a6067ae01274f7fd9e 275 Gene3D G3DSA:3.40.50.620 4 269 1.6E-67 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS11920 89843ac59e6e89a6067ae01274f7fd9e 275 SUPERFAMILY SSF52402 3 273 1.09E-86 T 09-03-2017 RG43_RS17075 76663ae74b933e33d47f64017f780c0d 98 ProDom PD084412 GAM INHIBITOR HOST-NUCLEASE BACTERIPHAGE CP-933V BP- 933W PROPHAGE 1 98 3.0E-52 T 09-03-2017 IPR009274 Host-nuclease inhibitor Gam RG43_RS17075 76663ae74b933e33d47f64017f780c0d 98 Pfam PF06064 Host-nuclease inhibitor protein Gam 1 98 2.5E-65 T 09-03-2017 IPR009274 Host-nuclease inhibitor Gam RG43_RS03285 0db73fd0fcf0851cd441452f1481c681 144 Pfam PF03610 PTS system fructose IIA component 4 113 1.1E-26 T 09-03-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 RG43_RS03285 0db73fd0fcf0851cd441452f1481c681 144 SUPERFAMILY SSF53062 1 126 1.18E-33 T 09-03-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 RG43_RS03285 0db73fd0fcf0851cd441452f1481c681 144 Gene3D G3DSA:3.40.50.510 1 135 3.0E-38 T 09-03-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 RG43_RS09895 00bebc4dfed8242941b472c03b243e15 227 SUPERFAMILY SSF89872 121 203 4.71E-5 T 09-03-2017 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 RG43_RS09895 00bebc4dfed8242941b472c03b243e15 227 Gene3D G3DSA:3.40.1420.10 110 223 1.7E-18 T 09-03-2017 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 RG43_RS04620 b7f41b3e3f13b35450774e842945ee8a 182 PIRSF PIRSF030791 1 170 1.2E-103 T 09-03-2017 IPR016957 Uncharacterised conserved protein UCP030791 RG43_RS05040 88088e38ebc087bb6ab72122d1f7bbf1 71 ProDom PD056256 YQGC CYTOPLASMIC 1 51 5.0E-16 T 09-03-2017 IPR020102 Uncharacterised protein family YqgC RG43_RS21280 ed57030188b82720ed75c9d9e5126d67 784 Pfam PF04453 Organic solvent tolerance protein 309 697 6.4E-112 T 09-03-2017 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 RG43_RS21280 ed57030188b82720ed75c9d9e5126d67 784 Gene3D G3DSA:2.60.450.10 47 209 2.9E-25 T 09-03-2017 RG43_RS21280 ed57030188b82720ed75c9d9e5126d67 784 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 14 763 21.37 T 09-03-2017 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 RG43_RS21280 ed57030188b82720ed75c9d9e5126d67 784 Pfam PF03968 OstA-like protein 53 194 2.1E-28 T 09-03-2017 IPR005653 Organic solvent tolerance-like, N-terminal RG43_RS06235 7d03db32baa353bf74d064d746359a3b 90 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 17 33 3.3E-23 T 09-03-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC RG43_RS06235 7d03db32baa353bf74d064d746359a3b 90 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 62 74 3.3E-23 T 09-03-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC RG43_RS06235 7d03db32baa353bf74d064d746359a3b 90 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 3.3E-23 T 09-03-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC RG43_RS06235 7d03db32baa353bf74d064d746359a3b 90 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 44 60 3.3E-23 T 09-03-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC RG43_RS06235 7d03db32baa353bf74d064d746359a3b 90 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 09-03-2017 IPR019812 Hydrogenase assembly chaperone, conserved site RG43_RS06235 7d03db32baa353bf74d064d746359a3b 90 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 84 1.8E-33 T 09-03-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC RG43_RS06235 7d03db32baa353bf74d064d746359a3b 90 SUPERFAMILY SSF159127 1 86 1.96E-28 T 09-03-2017 RG43_RS06235 7d03db32baa353bf74d064d746359a3b 90 Pfam PF01455 HupF/HypC family 1 71 3.2E-26 T 09-03-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC RG43_RS24600 35225c352ecb5aa20abf79a03dbd4e4b 295 SUPERFAMILY SSF74650 26 292 3.08E-42 T 09-03-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 RG43_RS24600 35225c352ecb5aa20abf79a03dbd4e4b 295 Gene3D G3DSA:2.70.98.10 17 211 2.0E-16 T 09-03-2017 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 RG43_RS24600 35225c352ecb5aa20abf79a03dbd4e4b 295 Pfam PF01263 Aldose 1-epimerase 28 212 4.7E-20 T 09-03-2017 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 RG43_RS22495 5a010bd1ba6a10a9e5e91a82e46f3d73 163 Pfam PF13560 Helix-turn-helix domain 18 75 3.3E-11 T 09-03-2017 RG43_RS22495 5a010bd1ba6a10a9e5e91a82e46f3d73 163 SUPERFAMILY SSF47413 10 75 8.73E-12 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS22495 5a010bd1ba6a10a9e5e91a82e46f3d73 163 SMART SM00530 22 77 1.1E-7 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RG43_RS22495 5a010bd1ba6a10a9e5e91a82e46f3d73 163 Gene3D G3DSA:1.10.260.40 16 75 9.4E-12 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS13960 decd354ea129f27e403d1f2852c4361a 457 SUPERFAMILY SSF56954 3 453 4.05E-104 T 09-03-2017 RG43_RS13960 decd354ea129f27e403d1f2852c4361a 457 Pfam PF02321 Outer membrane efflux protein 57 240 4.2E-25 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RG43_RS13960 decd354ea129f27e403d1f2852c4361a 457 Pfam PF02321 Outer membrane efflux protein 272 435 3.8E-29 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RG43_RS13960 decd354ea129f27e403d1f2852c4361a 457 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 9 452 2.2E-112 T 09-03-2017 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 RG43_RS13960 decd354ea129f27e403d1f2852c4361a 457 Gene3D G3DSA:2.20.200.10 93 127 8.2E-16 T 09-03-2017 RG43_RS13960 decd354ea129f27e403d1f2852c4361a 457 Gene3D G3DSA:2.20.200.10 302 337 8.2E-16 T 09-03-2017 RG43_RS13960 decd354ea129f27e403d1f2852c4361a 457 Gene3D G3DSA:1.20.1600.10 128 301 1.8E-94 T 09-03-2017 RG43_RS13960 decd354ea129f27e403d1f2852c4361a 457 Gene3D G3DSA:1.20.1600.10 339 453 1.8E-94 T 09-03-2017 RG43_RS13960 decd354ea129f27e403d1f2852c4361a 457 Gene3D G3DSA:1.20.1600.10 45 83 1.8E-94 T 09-03-2017 RG43_RS00425 a2b3336de09ad40a6529d7ed48322122 104 Gene3D G3DSA:3.40.50.2300 1 99 6.2E-37 T 09-03-2017 RG43_RS00425 a2b3336de09ad40a6529d7ed48322122 104 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 90 4.5E-17 T 09-03-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RG43_RS00425 a2b3336de09ad40a6529d7ed48322122 104 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 4 88 1.9E-29 T 09-03-2017 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 RG43_RS00425 a2b3336de09ad40a6529d7ed48322122 104 SUPERFAMILY SSF52794 2 99 1.06E-32 T 09-03-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RG43_RS10800 4859e3ff75f7663a7eeb4b81c84065f7 401 Pfam PF04143 Sulphur transport 3 160 4.1E-26 T 09-03-2017 IPR007272 Sulphur transport domain RG43_RS10800 4859e3ff75f7663a7eeb4b81c84065f7 401 Pfam PF04143 Sulphur transport 237 392 2.8E-24 T 09-03-2017 IPR007272 Sulphur transport domain RG43_RS24995 cf89ed45e70e820b741ab0f82fd13925 206 Pfam PF01810 LysE type translocator 14 205 3.8E-58 T 09-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RG43_RS24995 cf89ed45e70e820b741ab0f82fd13925 206 PIRSF PIRSF006324 1 206 5.0E-42 T 09-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RG43_RS24995 cf89ed45e70e820b741ab0f82fd13925 206 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 18 202 6.8E-70 T 09-03-2017 IPR004778 Homoserine/Threonine efflux protein GO:0016021 RG43_RS08165 9bf31f5efdf6f28c67a6f9e40ea9cfea 392 Hamap MF_01118 UPF0226 membrane protein . 1 392 30.393 T 09-03-2017 IPR023008 Uncharacterised protein family UPF0226, major facilitator superfamily RG43_RS08165 9bf31f5efdf6f28c67a6f9e40ea9cfea 392 Pfam PF07690 Major Facilitator Superfamily 20 242 3.7E-16 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS08165 9bf31f5efdf6f28c67a6f9e40ea9cfea 392 Gene3D G3DSA:1.20.1250.20 17 198 7.0E-19 T 09-03-2017 RG43_RS08165 9bf31f5efdf6f28c67a6f9e40ea9cfea 392 Gene3D G3DSA:1.20.1250.20 221 388 2.0E-21 T 09-03-2017 RG43_RS08165 9bf31f5efdf6f28c67a6f9e40ea9cfea 392 SUPERFAMILY SSF103473 14 391 1.7E-52 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS05020 7dffe716055bd53845863d0bdb741f04 464 PRINTS PR00171 Sugar transporter signature 26 36 2.0E-23 T 09-03-2017 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 RG43_RS05020 7dffe716055bd53845863d0bdb741f04 464 PRINTS PR00171 Sugar transporter signature 262 272 2.0E-23 T 09-03-2017 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 RG43_RS05020 7dffe716055bd53845863d0bdb741f04 464 PRINTS PR00171 Sugar transporter signature 352 373 2.0E-23 T 09-03-2017 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 RG43_RS05020 7dffe716055bd53845863d0bdb741f04 464 PRINTS PR00171 Sugar transporter signature 375 387 2.0E-23 T 09-03-2017 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 RG43_RS05020 7dffe716055bd53845863d0bdb741f04 464 PRINTS PR00171 Sugar transporter signature 109 128 2.0E-23 T 09-03-2017 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 RG43_RS05020 7dffe716055bd53845863d0bdb741f04 464 Gene3D G3DSA:1.20.1250.20 20 206 1.3E-29 T 09-03-2017 RG43_RS05020 7dffe716055bd53845863d0bdb741f04 464 Gene3D G3DSA:1.20.1250.20 244 449 2.1E-26 T 09-03-2017 RG43_RS05020 7dffe716055bd53845863d0bdb741f04 464 ProSitePatterns PS00216 Sugar transport proteins signature 1. 307 323 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RG43_RS05020 7dffe716055bd53845863d0bdb741f04 464 ProSitePatterns PS00217 Sugar transport proteins signature 2. 114 139 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RG43_RS05020 7dffe716055bd53845863d0bdb741f04 464 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 7 447 2.2E-152 T 09-03-2017 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 RG43_RS05020 7dffe716055bd53845863d0bdb741f04 464 Pfam PF00083 Sugar (and other) transporter 18 450 4.4E-141 T 09-03-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RG43_RS05020 7dffe716055bd53845863d0bdb741f04 464 SUPERFAMILY SSF103473 13 448 1.57E-77 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS23165 70c63baf5562ab1e535259a610e2e997 326 Pfam PF02653 Branched-chain amino acid transport system / permease component 53 318 8.3E-48 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RG43_RS19875 e71688aa3145fa01fc143e1554dd4023 151 Pfam PF03245 Bacteriophage Rz lysis protein 29 150 3.2E-40 T 09-03-2017 IPR004929 Bacteriophage Rz lysis protein GO:0019076|GO:0019835 RG43_RS14715 2a608b3c2513c56feb3d1e8b26dfc719 231 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 5 231 29.141 T 09-03-2017 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 RG43_RS14715 2a608b3c2513c56feb3d1e8b26dfc719 231 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 103 2.1E-40 T 09-03-2017 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 RG43_RS14715 2a608b3c2513c56feb3d1e8b26dfc719 231 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 6 230 3.7E-71 T 09-03-2017 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 RG43_RS14715 2a608b3c2513c56feb3d1e8b26dfc719 231 Gene3D G3DSA:2.160.20.70 114 230 5.2E-37 T 09-03-2017 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 RG43_RS14715 2a608b3c2513c56feb3d1e8b26dfc719 231 SUPERFAMILY SSF63848 125 230 3.53E-29 T 09-03-2017 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 RG43_RS14715 2a608b3c2513c56feb3d1e8b26dfc719 231 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 128 227 5.8E-30 T 09-03-2017 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 RG43_RS11435 8fe88c26cfd0dcaad6c9f7a6ad0222b6 427 Pfam PF04403 Paraquat-inducible protein A 263 418 2.8E-43 T 09-03-2017 IPR007498 Paraquat-inducible protein A RG43_RS11435 8fe88c26cfd0dcaad6c9f7a6ad0222b6 427 Pfam PF04403 Paraquat-inducible protein A 66 217 2.3E-39 T 09-03-2017 IPR007498 Paraquat-inducible protein A RG43_RS11435 8fe88c26cfd0dcaad6c9f7a6ad0222b6 427 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 16 417 1.4E-212 T 09-03-2017 IPR005219 Conserved hypothetical protein CHP00155 RG43_RS16110 f64233bd1c609e5d66549657a48d9fe4 205 SUPERFAMILY SSF54862 3 199 2.83E-71 T 09-03-2017 RG43_RS16110 f64233bd1c609e5d66549657a48d9fe4 205 Gene3D G3DSA:3.30.70.20 4 74 3.3E-18 T 09-03-2017 RG43_RS16110 f64233bd1c609e5d66549657a48d9fe4 205 Gene3D G3DSA:3.30.70.20 119 172 4.9E-19 T 09-03-2017 RG43_RS16110 f64233bd1c609e5d66549657a48d9fe4 205 Pfam PF12800 4Fe-4S binding domain 12 25 0.0026 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS16110 f64233bd1c609e5d66549657a48d9fe4 205 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS16110 f64233bd1c609e5d66549657a48d9fe4 205 Pfam PF13247 4Fe-4S dicluster domain 59 153 9.1E-30 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS16110 f64233bd1c609e5d66549657a48d9fe4 205 Gene3D G3DSA:3.30.70.20 75 118 1.2E-26 T 09-03-2017 RG43_RS16110 f64233bd1c609e5d66549657a48d9fe4 205 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 4 163 6.5E-81 T 09-03-2017 IPR014297 Dimethylsulphoxide reductase, chain B RG43_RS04920 942656c075cbe0d7989ebcf0cc018006 239 Pfam PF02390 Putative methyltransferase 64 233 5.8E-62 T 09-03-2017 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 RG43_RS04920 942656c075cbe0d7989ebcf0cc018006 239 Gene3D G3DSA:3.40.50.150 53 193 2.5E-14 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS04920 942656c075cbe0d7989ebcf0cc018006 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 24 238 30.392 T 09-03-2017 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 RG43_RS04920 942656c075cbe0d7989ebcf0cc018006 239 SUPERFAMILY SSF53335 18 237 6.65E-38 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS04920 942656c075cbe0d7989ebcf0cc018006 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 49 238 8.1E-76 T 09-03-2017 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 RG43_RS12565 45c0c3c3fd1d76177a74e537fd64ffb2 342 SUPERFAMILY SSF53822 63 338 3.87E-52 T 09-03-2017 IPR028082 Periplasmic binding protein-like I RG43_RS12565 45c0c3c3fd1d76177a74e537fd64ffb2 342 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 65 341 3.3E-101 T 09-03-2017 IPR001761 Periplasmic binding protein/LacI sugar binding domain RG43_RS12565 45c0c3c3fd1d76177a74e537fd64ffb2 342 SMART SM00354 6 76 2.9E-33 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS12565 45c0c3c3fd1d76177a74e537fd64ffb2 342 Gene3D G3DSA:3.40.50.2300 179 325 1.2E-36 T 09-03-2017 RG43_RS12565 45c0c3c3fd1d76177a74e537fd64ffb2 342 Gene3D G3DSA:1.10.260.40 7 58 2.8E-22 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS12565 45c0c3c3fd1d76177a74e537fd64ffb2 342 Gene3D G3DSA:3.40.50.2300 59 178 2.1E-35 T 09-03-2017 RG43_RS12565 45c0c3c3fd1d76177a74e537fd64ffb2 342 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 9.0E-19 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RG43_RS12565 45c0c3c3fd1d76177a74e537fd64ffb2 342 SUPERFAMILY SSF47413 5 64 3.38E-16 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS12565 45c0c3c3fd1d76177a74e537fd64ffb2 342 ProSitePatterns PS00356 LacI-type HTH domain signature. 9 27 - T 09-03-2017 RG43_RS06940 51dcae9eaed28566a0a75c23feb0005e 178 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 23 164 49.706 T 09-03-2017 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 RG43_RS06940 51dcae9eaed28566a0a75c23feb0005e 178 Pfam PF14437 MafB19-like deaminase 18 164 2.2E-33 T 09-03-2017 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 RG43_RS06940 51dcae9eaed28566a0a75c23feb0005e 178 Gene3D G3DSA:3.40.140.10 17 162 3.4E-61 T 09-03-2017 RG43_RS06940 51dcae9eaed28566a0a75c23feb0005e 178 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 68 105 - T 09-03-2017 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 RG43_RS06940 51dcae9eaed28566a0a75c23feb0005e 178 SUPERFAMILY SSF53927 15 168 9.2E-60 T 09-03-2017 IPR016193 Cytidine deaminase-like GO:0003824 RG43_RS25630 a8a802f0d44be64679e9db985d203e64 85 Pfam PF01809 Haemolytic domain 10 75 1.1E-30 T 09-03-2017 IPR002696 Putative membrane protein insertion efficiency factor RG43_RS25630 a8a802f0d44be64679e9db985d203e64 85 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 12 77 6.1E-33 T 09-03-2017 IPR002696 Putative membrane protein insertion efficiency factor RG43_RS25630 a8a802f0d44be64679e9db985d203e64 85 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 22 68 4.0E-21 T 09-03-2017 IPR002696 Putative membrane protein insertion efficiency factor RG43_RS25630 a8a802f0d44be64679e9db985d203e64 85 SMART SM01234 8 75 2.7E-45 T 09-03-2017 IPR002696 Putative membrane protein insertion efficiency factor RG43_RS25630 a8a802f0d44be64679e9db985d203e64 85 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 8 76 25.359 T 09-03-2017 IPR002696 Putative membrane protein insertion efficiency factor RG43_RS08975 747dac377cf1e18da7dfae1126581d72 416 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 201 412 9.9E-66 T 09-03-2017 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 RG43_RS08975 747dac377cf1e18da7dfae1126581d72 416 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 412 1.8E-155 T 09-03-2017 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 RG43_RS08975 747dac377cf1e18da7dfae1126581d72 416 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 2.0E-21 T 09-03-2017 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 RG43_RS24455 c99947d21a1fb44906dc1d9055b5af56 327 Pfam PF03812 2-keto-3-deoxygluconate permease 3 312 1.2E-115 T 09-03-2017 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 RG43_RS24455 c99947d21a1fb44906dc1d9055b5af56 327 Hamap MF_00070 2-keto-3-deoxygluconate permease [kdgT]. 1 318 41.586 T 09-03-2017 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 RG43_RS24455 c99947d21a1fb44906dc1d9055b5af56 327 TIGRFAM TIGR00793 kdgT: 2-keto-3-deoxygluconate transporter 1 314 1.2E-186 T 09-03-2017 IPR018395 2-keto-3-deoxygluconate permease, subgroup GO:0008643|GO:0015649|GO:0016021|GO:0046411 RG43_RS24455 c99947d21a1fb44906dc1d9055b5af56 327 ProDom PD024513 PERMEASE 2-KETO-3-DEOXYGLUCONATE MEMBRANE TRANSMEMBRANE SUGAR KDG SYMPORT INNER 2-KETO-3-DEOXY-D-GLUCONATE SYSTEM 14 327 2.0E-136 T 09-03-2017 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 RG43_RS10250 e69369d96c87ed4c9238a190c0ed177b 67 Pfam PF07358 Protein of unknown function (DUF1482) 6 61 1.4E-19 T 09-03-2017 IPR009954 Protein of unknown function DUF1482 RG43_RS14555 9296ee4aa3402f3a19fe8e95b50ab21d 210 Pfam PF02734 DAK2 domain 32 204 4.1E-56 T 09-03-2017 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 RG43_RS14555 9296ee4aa3402f3a19fe8e95b50ab21d 210 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 9 205 1.6E-82 T 09-03-2017 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 RG43_RS14555 9296ee4aa3402f3a19fe8e95b50ab21d 210 SUPERFAMILY SSF101473 2 204 1.03E-57 T 09-03-2017 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 RG43_RS14555 9296ee4aa3402f3a19fe8e95b50ab21d 210 SMART SM01120 32 206 4.1E-81 T 09-03-2017 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 RG43_RS06515 a29f59ebafce7e0553309b9794d32327 136 TIGRFAM TIGR00333 nrdI: nrdI protein 5 131 1.1E-62 T 09-03-2017 IPR004465 Ribonucleotide reductase Class Ib, NrdI RG43_RS06515 a29f59ebafce7e0553309b9794d32327 136 PIRSF PIRSF005087 1 136 1.9E-55 T 09-03-2017 IPR004465 Ribonucleotide reductase Class Ib, NrdI RG43_RS06515 a29f59ebafce7e0553309b9794d32327 136 Hamap MF_00128 Protein NrdI [nrdI]. 3 132 36.973 T 09-03-2017 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial RG43_RS06515 a29f59ebafce7e0553309b9794d32327 136 Gene3D G3DSA:3.40.50.360 4 132 9.3E-59 T 09-03-2017 IPR029039 Flavoprotein-like domain RG43_RS06515 a29f59ebafce7e0553309b9794d32327 136 Pfam PF07972 NrdI Flavodoxin like 5 122 2.6E-48 T 09-03-2017 IPR004465 Ribonucleotide reductase Class Ib, NrdI RG43_RS06515 a29f59ebafce7e0553309b9794d32327 136 SUPERFAMILY SSF52218 2 131 9.02E-24 T 09-03-2017 IPR029039 Flavoprotein-like domain RG43_RS19930 5f22cc755f3e3ab8b424bdd689131005 272 Gene3D G3DSA:1.10.10.10 14 86 3.1E-6 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS19930 5f22cc755f3e3ab8b424bdd689131005 272 Pfam PF13730 Helix-turn-helix domain 19 66 9.1E-10 T 09-03-2017 RG43_RS19930 5f22cc755f3e3ab8b424bdd689131005 272 SUPERFAMILY SSF46785 14 74 1.67E-5 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS16935 ee9fe0e26875517954e23c3d1b0ccd04 641 Pfam PF05876 Phage terminase large subunit (GpA) 39 600 1.2E-161 T 09-03-2017 IPR008866 Bacteriophage lambda, GpA RG43_RS11925 34dd62a4996acbdbf4f642f068dc8144 112 Pfam PF04355 SmpA / OmlA family 33 96 4.0E-11 T 09-03-2017 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 RG43_RS09730 5d065600d9018e5095b8bfc2b353d82d 325 Pfam PF02706 Chain length determinant protein 16 184 2.0E-17 T 09-03-2017 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 RG43_RS09730 5d065600d9018e5095b8bfc2b353d82d 325 Gene3D G3DSA:3.30.1890.10 52 186 1.1E-57 T 09-03-2017 RG43_RS09730 5d065600d9018e5095b8bfc2b353d82d 325 Gene3D G3DSA:3.30.1890.10 251 294 1.1E-57 T 09-03-2017 RG43_RS09730 5d065600d9018e5095b8bfc2b353d82d 325 SUPERFAMILY SSF160355 54 292 3.66E-69 T 09-03-2017 RG43_RS20845 640e0a8941499479f20351809db85375 283 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 23 68 1.1E-7 T 09-03-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RG43_RS20845 640e0a8941499479f20351809db85375 283 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 2 281 2.9E-131 T 09-03-2017 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 RG43_RS20845 640e0a8941499479f20351809db85375 283 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 1.3E-104 T 09-03-2017 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 RG43_RS20845 640e0a8941499479f20351809db85375 283 Gene3D G3DSA:3.30.1300.10 181 282 2.6E-32 T 09-03-2017 RG43_RS20845 640e0a8941499479f20351809db85375 283 SUPERFAMILY SSF52374 3 281 5.9E-108 T 09-03-2017 RG43_RS20845 640e0a8941499479f20351809db85375 283 Gene3D G3DSA:3.40.50.620 3 176 7.2E-78 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS20845 640e0a8941499479f20351809db85375 283 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 40.665 T 09-03-2017 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 RG43_RS15270 05b236fefbd1898e9f87b93852aeee55 84 Pfam PF13991 BssS protein family 11 76 5.4E-32 T 09-03-2017 IPR025730 Biofilm regulator BssS RG43_RS15270 05b236fefbd1898e9f87b93852aeee55 84 ProDom PD060858 YCEP CYTOPLASMIC STY1199 ESCHERICHIA COLI SIMILAR ECS1438 1 84 7.0E-45 T 09-03-2017 IPR025730 Biofilm regulator BssS RG43_RS23070 abc7210690ff4438fc1de5a5fdc6e647 259 Gene3D G3DSA:1.10.3720.10 60 258 5.0E-33 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS23070 abc7210690ff4438fc1de5a5fdc6e647 259 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 16 258 1.2E-93 T 09-03-2017 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 RG43_RS23070 abc7210690ff4438fc1de5a5fdc6e647 259 SUPERFAMILY SSF161098 62 253 4.32E-36 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS23070 abc7210690ff4438fc1de5a5fdc6e647 259 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 258 1.3E-22 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS12115 06fae8bc6a882323282c58129bdf9b9e 277 Pfam PF03618 Kinase/pyrophosphorylase 9 267 4.7E-73 T 09-03-2017 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 RG43_RS12115 06fae8bc6a882323282c58129bdf9b9e 277 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 6 276 72.949 T 09-03-2017 IPR026530 Phosphoenolpyruvate synthase regulatory protein RG43_RS09130 35e7b08ba2947ff6b5d1f916df9a2689 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RG43_RS09130 35e7b08ba2947ff6b5d1f916df9a2689 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 7.8E-39 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS09130 35e7b08ba2947ff6b5d1f916df9a2689 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 7.8E-39 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS09130 35e7b08ba2947ff6b5d1f916df9a2689 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 7.8E-39 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS09130 35e7b08ba2947ff6b5d1f916df9a2689 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 7.8E-39 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS09130 35e7b08ba2947ff6b5d1f916df9a2689 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 7.8E-39 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS09130 35e7b08ba2947ff6b5d1f916df9a2689 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 7.8E-39 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS09130 35e7b08ba2947ff6b5d1f916df9a2689 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 243 6.6E-60 T 09-03-2017 RG43_RS09130 35e7b08ba2947ff6b5d1f916df9a2689 253 SUPERFAMILY SSF51735 3 245 1.09E-75 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS09130 35e7b08ba2947ff6b5d1f916df9a2689 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 8.1E-13 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS09130 35e7b08ba2947ff6b5d1f916df9a2689 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 8.1E-13 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS09130 35e7b08ba2947ff6b5d1f916df9a2689 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 8.1E-13 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS09130 35e7b08ba2947ff6b5d1f916df9a2689 253 Gene3D G3DSA:3.40.50.720 3 246 5.7E-77 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS19575 c4dae457b25ed4aa9828a2f99810cd1d 329 SUPERFAMILY SSF51430 1 314 6.29E-103 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain RG43_RS19575 c4dae457b25ed4aa9828a2f99810cd1d 329 Gene3D G3DSA:3.20.20.100 1 323 1.6E-114 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain RG43_RS19575 c4dae457b25ed4aa9828a2f99810cd1d 329 Pfam PF00248 Aldo/keto reductase family 16 309 2.1E-75 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain RG43_RS17340 1ed5362504934d484cbe923df0583e6c 97 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 17 94 6.8E-34 T 09-03-2017 IPR011846 Cyd operon protein YbgE RG43_RS17340 1ed5362504934d484cbe923df0583e6c 97 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 5 97 2.0E-42 T 09-03-2017 IPR011846 Cyd operon protein YbgE RG43_RS09125 06da404af557c537e5d35032fdc415e1 478 Gene3D G3DSA:2.20.200.10 325 360 8.6E-16 T 09-03-2017 RG43_RS09125 06da404af557c537e5d35032fdc415e1 478 Gene3D G3DSA:2.20.200.10 104 153 8.6E-16 T 09-03-2017 RG43_RS09125 06da404af557c537e5d35032fdc415e1 478 Pfam PF02321 Outer membrane efflux protein 69 266 3.2E-18 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RG43_RS09125 06da404af557c537e5d35032fdc415e1 478 Pfam PF02321 Outer membrane efflux protein 294 473 4.2E-12 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RG43_RS09125 06da404af557c537e5d35032fdc415e1 478 SUPERFAMILY SSF56954 7 476 3.01E-74 T 09-03-2017 RG43_RS09125 06da404af557c537e5d35032fdc415e1 478 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 16 475 7.9E-81 T 09-03-2017 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 RG43_RS09125 06da404af557c537e5d35032fdc415e1 478 Gene3D G3DSA:1.20.1600.10 53 93 8.0E-65 T 09-03-2017 RG43_RS09125 06da404af557c537e5d35032fdc415e1 478 Gene3D G3DSA:1.20.1600.10 362 475 8.0E-65 T 09-03-2017 RG43_RS09125 06da404af557c537e5d35032fdc415e1 478 Gene3D G3DSA:1.20.1600.10 154 324 8.0E-65 T 09-03-2017 RG43_RS22785 4c57b23ab62f3064487d3fd7f5504aa8 105 Pfam PF00893 Small Multidrug Resistance protein 1 93 3.2E-33 T 09-03-2017 IPR000390 Small multidrug resistance protein family GO:0016021 RG43_RS22785 4c57b23ab62f3064487d3fd7f5504aa8 105 SUPERFAMILY SSF103481 5 103 9.42E-21 T 09-03-2017 RG43_RS23030 5a9e22725a4e1db2084741b8bfe7124b 500 Pfam PF08946 Osmosensory transporter coiled coil 454 499 1.2E-22 T 09-03-2017 IPR015041 Osmosensory transporter coiled coil RG43_RS23030 5a9e22725a4e1db2084741b8bfe7124b 500 ProSitePatterns PS00216 Sugar transport proteins signature 1. 315 332 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RG43_RS23030 5a9e22725a4e1db2084741b8bfe7124b 500 Pfam PF00083 Sugar (and other) transporter 28 448 5.4E-76 T 09-03-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RG43_RS23030 5a9e22725a4e1db2084741b8bfe7124b 500 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 33 432 3.8E-145 T 09-03-2017 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 RG43_RS23030 5a9e22725a4e1db2084741b8bfe7124b 500 SUPERFAMILY SSF103661 465 497 1.83E-12 T 09-03-2017 RG43_RS23030 5a9e22725a4e1db2084741b8bfe7124b 500 Gene3D G3DSA:1.20.1250.20 256 444 6.9E-28 T 09-03-2017 RG43_RS23030 5a9e22725a4e1db2084741b8bfe7124b 500 Gene3D G3DSA:1.20.1250.20 24 230 1.3E-23 T 09-03-2017 RG43_RS23030 5a9e22725a4e1db2084741b8bfe7124b 500 SUPERFAMILY SSF103473 24 446 9.94E-70 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS05650 14beed2c4fa939d373a2ee78778ffc4c 315 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 09-03-2017 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RG43_RS05650 14beed2c4fa939d373a2ee78778ffc4c 315 Gene3D G3DSA:3.40.50.720 116 285 3.5E-53 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS05650 14beed2c4fa939d373a2ee78778ffc4c 315 SUPERFAMILY SSF52283 26 137 3.21E-22 T 09-03-2017 RG43_RS05650 14beed2c4fa939d373a2ee78778ffc4c 315 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 17 314 6.4E-21 T 09-03-2017 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 RG43_RS05650 14beed2c4fa939d373a2ee78778ffc4c 315 SUPERFAMILY SSF51735 103 285 3.89E-46 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS05650 14beed2c4fa939d373a2ee78778ffc4c 315 Gene3D G3DSA:3.40.50.720 48 115 1.0E-21 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS05650 14beed2c4fa939d373a2ee78778ffc4c 315 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 112 284 1.3E-46 T 09-03-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RG43_RS16325 cab6868b44e76d13250c5aaa6032f39c 281 Gene3D G3DSA:1.10.3720.10 11 270 3.1E-57 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS16325 cab6868b44e76d13250c5aaa6032f39c 281 SUPERFAMILY SSF161098 8 266 1.5E-50 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS16325 cab6868b44e76d13250c5aaa6032f39c 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 273 1.9E-14 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS12955 92693861fcbab0fcb97f3e9ba2c71bbf 330 Pfam PF02653 Branched-chain amino acid transport system / permease component 35 305 2.4E-47 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RG43_RS05085 79047a9edbb39f23e608cf6761b66a31 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 145 3.0E-28 T 09-03-2017 IPR002178 PTS EIIA type-2 domain RG43_RS05085 79047a9edbb39f23e608cf6761b66a31 147 SUPERFAMILY SSF55804 1 145 3.79E-34 T 09-03-2017 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 RG43_RS05085 79047a9edbb39f23e608cf6761b66a31 147 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 09-03-2017 IPR002178 PTS EIIA type-2 domain RG43_RS05085 79047a9edbb39f23e608cf6761b66a31 147 Gene3D G3DSA:3.40.930.10 1 146 4.1E-50 T 09-03-2017 IPR002178 PTS EIIA type-2 domain RG43_RS16640 abff3b4bc0880312dc5caa4a683d877d 86 Pfam PF07338 Protein of unknown function (DUF1471) 34 86 1.8E-16 T 09-03-2017 IPR010854 Domain of unknown function DUF1471 RG43_RS16640 abff3b4bc0880312dc5caa4a683d877d 86 Gene3D G3DSA:3.30.1660.10 18 86 1.5E-27 T 09-03-2017 IPR025543 Dodecin-like RG43_RS16640 abff3b4bc0880312dc5caa4a683d877d 86 SUPERFAMILY SSF159871 3 86 4.71E-25 T 09-03-2017 IPR010854 Domain of unknown function DUF1471 RG43_RS18930 38a74cb1c9ac64e2eec5a461bd6814cf 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 1.9E-78 T 09-03-2017 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 RG43_RS18930 38a74cb1c9ac64e2eec5a461bd6814cf 149 Pfam PF03477 ATP cone domain 50 136 2.6E-15 T 09-03-2017 IPR005144 ATP-cone domain Reactome: R-HSA-499943 RG43_RS18930 38a74cb1c9ac64e2eec5a461bd6814cf 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 89.122 T 09-03-2017 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 RG43_RS12900 0a633e4b188bd2a959403c010d5ba278 308 Gene3D G3DSA:3.40.710.10 8 308 1.3E-126 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like RG43_RS12900 0a633e4b188bd2a959403c010d5ba278 308 Hamap MF_00313 Glutaminase [glsA]. 6 308 47.251 T 09-03-2017 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 RG43_RS12900 0a633e4b188bd2a959403c010d5ba278 308 Pfam PF04960 Glutaminase 24 308 6.7E-114 T 09-03-2017 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 RG43_RS12900 0a633e4b188bd2a959403c010d5ba278 308 TIGRFAM TIGR03814 Gln_ase: glutaminase A 10 308 1.9E-131 T 09-03-2017 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 RG43_RS12900 0a633e4b188bd2a959403c010d5ba278 308 SUPERFAMILY SSF56601 7 308 1.22E-115 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like RG43_RS18845 8404e23b100d4aba614871681fcc1a72 204 Pfam PF00510 Cytochrome c oxidase subunit III 16 202 1.7E-15 T 09-03-2017 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RG43_RS18845 8404e23b100d4aba614871681fcc1a72 204 SUPERFAMILY SSF81452 12 202 1.7E-59 T 09-03-2017 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RG43_RS18845 8404e23b100d4aba614871681fcc1a72 204 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 25 204 2.6E-88 T 09-03-2017 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 RG43_RS18845 8404e23b100d4aba614871681fcc1a72 204 Gene3D G3DSA:1.20.120.80 26 202 1.7E-51 T 09-03-2017 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RG43_RS12110 4ff96fba3c38492cef054a89021fa03e 348 Pfam PF00793 DAHP synthetase I family 43 336 6.9E-110 T 09-03-2017 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 RG43_RS12110 4ff96fba3c38492cef054a89021fa03e 348 SUPERFAMILY SSF51569 7 347 4.29E-132 T 09-03-2017 RG43_RS12110 4ff96fba3c38492cef054a89021fa03e 348 Gene3D G3DSA:3.20.20.70 8 347 8.7E-147 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS12110 4ff96fba3c38492cef054a89021fa03e 348 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 348 1.5E-177 T 09-03-2017 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 RG43_RS12110 4ff96fba3c38492cef054a89021fa03e 348 PIRSF PIRSF001361 1 348 2.0E-158 T 09-03-2017 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 RG43_RS12765 715552cc00b8648057e149949e26d2ab 186 Gene3D G3DSA:3.40.630.30 6 166 6.9E-43 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS12765 715552cc00b8648057e149949e26d2ab 186 SUPERFAMILY SSF55729 6 164 3.04E-41 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS12765 715552cc00b8648057e149949e26d2ab 186 Pfam PF13302 Acetyltransferase (GNAT) domain 8 141 4.8E-21 T 09-03-2017 IPR000182 GNAT domain GO:0008080 RG43_RS04475 99db5b915da171a2103d9bad1c591b08 280 Pfam PF13708 Domain of unknown function (DUF4942) 88 275 1.6E-56 T 09-03-2017 IPR031339 Domain of unknown function DUF4942 RG43_RS26850 99db5b915da171a2103d9bad1c591b08 280 Pfam PF13708 Domain of unknown function (DUF4942) 88 275 1.6E-56 T 09-03-2017 IPR031339 Domain of unknown function DUF4942 RG43_RS13230 e593abbd41a6d3e248919a26d319faac 281 Pfam PF00797 N-acetyltransferase 22 256 6.0E-86 T 09-03-2017 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 RG43_RS13230 e593abbd41a6d3e248919a26d319faac 281 PRINTS PR01543 Arylamine N-acetyltransferase signature 69 91 2.8E-8 T 09-03-2017 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 RG43_RS13230 e593abbd41a6d3e248919a26d319faac 281 PRINTS PR01543 Arylamine N-acetyltransferase signature 45 68 2.8E-8 T 09-03-2017 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 RG43_RS13230 e593abbd41a6d3e248919a26d319faac 281 PRINTS PR01543 Arylamine N-acetyltransferase signature 21 44 2.8E-8 T 09-03-2017 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 RG43_RS13230 e593abbd41a6d3e248919a26d319faac 281 PRINTS PR01543 Arylamine N-acetyltransferase signature 101 126 2.8E-8 T 09-03-2017 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 RG43_RS13230 e593abbd41a6d3e248919a26d319faac 281 Gene3D G3DSA:3.30.2140.10 3 135 2.4E-39 T 09-03-2017 RG43_RS13230 e593abbd41a6d3e248919a26d319faac 281 Gene3D G3DSA:3.30.2140.10 182 259 3.3E-14 T 09-03-2017 RG43_RS13230 e593abbd41a6d3e248919a26d319faac 281 SUPERFAMILY SSF54001 2 269 9.03E-89 T 09-03-2017 RG43_RS12795 a410e147ca06b1bc8c941b6280cbc307 455 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 23 418 2.6E-139 T 09-03-2017 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 RG43_RS12795 a410e147ca06b1bc8c941b6280cbc307 455 Gene3D G3DSA:1.20.1250.20 241 430 2.0E-14 T 09-03-2017 RG43_RS12795 a410e147ca06b1bc8c941b6280cbc307 455 Gene3D G3DSA:1.20.1250.20 19 222 3.4E-24 T 09-03-2017 RG43_RS12795 a410e147ca06b1bc8c941b6280cbc307 455 SUPERFAMILY SSF103473 15 434 8.11E-61 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS12795 a410e147ca06b1bc8c941b6280cbc307 455 Pfam PF07690 Major Facilitator Superfamily 21 326 3.5E-27 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS07285 29ef7660522d75a3f8b563776c1e81ef 747 SMART SM00052 492 735 7.4E-108 T 09-03-2017 IPR001633 EAL domain RG43_RS07285 29ef7660522d75a3f8b563776c1e81ef 747 Gene3D G3DSA:3.20.20.450 496 734 3.2E-74 T 09-03-2017 IPR001633 EAL domain RG43_RS07285 29ef7660522d75a3f8b563776c1e81ef 747 SMART SM00267 319 480 3.4E-19 T 09-03-2017 IPR000160 GGDEF domain RG43_RS07285 29ef7660522d75a3f8b563776c1e81ef 747 SUPERFAMILY SSF141868 497 738 7.06E-72 T 09-03-2017 IPR001633 EAL domain RG43_RS07285 29ef7660522d75a3f8b563776c1e81ef 747 Pfam PF05231 MASE1 15 320 2.0E-66 T 09-03-2017 IPR007895 MASE1 RG43_RS07285 29ef7660522d75a3f8b563776c1e81ef 747 Pfam PF00563 EAL domain 498 730 1.4E-66 T 09-03-2017 IPR001633 EAL domain RG43_RS02815 0d552860d03d7427ddfb58c6c723f3b7 132 PIRSF PIRSF006318 1 132 1.0E-51 T 09-03-2017 IPR009386 Protein of unknown function DUF1043 RG43_RS02815 0d552860d03d7427ddfb58c6c723f3b7 132 Pfam PF06295 Protein of unknown function (DUF1043) 6 126 5.1E-48 T 09-03-2017 IPR009386 Protein of unknown function DUF1043 RG43_RS06405 fc4f077eb268a92f29017fcaaedd8fa3 61 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 2.0E-20 T 09-03-2017 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 RG43_RS06405 fc4f077eb268a92f29017fcaaedd8fa3 61 Pfam PF02599 Global regulator protein family 1 52 2.6E-27 T 09-03-2017 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 RG43_RS06405 fc4f077eb268a92f29017fcaaedd8fa3 61 Hamap MF_00167 Carbon storage regulator [csrA]. 1 61 20.514 T 09-03-2017 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 RG43_RS06405 fc4f077eb268a92f29017fcaaedd8fa3 61 SUPERFAMILY SSF117130 1 54 3.66E-21 T 09-03-2017 RG43_RS06405 fc4f077eb268a92f29017fcaaedd8fa3 61 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 57 2.0E-31 T 09-03-2017 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 RG43_RS20880 825beec44b982ce9a7aac923f8148357 146 Pfam PF03610 PTS system fructose IIA component 3 116 6.0E-29 T 09-03-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 RG43_RS20880 825beec44b982ce9a7aac923f8148357 146 SUPERFAMILY SSF53062 1 124 7.59E-29 T 09-03-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 RG43_RS20880 825beec44b982ce9a7aac923f8148357 146 Gene3D G3DSA:3.40.50.510 1 133 4.9E-31 T 09-03-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 RG43_RS02675 6d780f06cb5873943afc4b165e26e03c 293 PIRSF PIRSF000401 1 293 7.6E-94 T 09-03-2017 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 RG43_RS02675 6d780f06cb5873943afc4b165e26e03c 293 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 292 2.0E-105 T 09-03-2017 RG43_RS02675 6d780f06cb5873943afc4b165e26e03c 293 Gene3D G3DSA:3.40.50.150 98 286 4.8E-41 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS02675 6d780f06cb5873943afc4b165e26e03c 293 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 292 33.515 T 09-03-2017 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 RG43_RS02675 6d780f06cb5873943afc4b165e26e03c 293 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 286 9.0E-128 T 09-03-2017 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 RG43_RS02675 6d780f06cb5873943afc4b165e26e03c 293 SUPERFAMILY SSF53335 42 291 9.1E-44 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS18720 6087b77aea927d65738bb3396fb39f38 129 Gene3D G3DSA:1.10.10.10 31 115 3.8E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS18720 6087b77aea927d65738bb3396fb39f38 129 SUPERFAMILY SSF46767 31 113 2.62E-26 T 09-03-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 RG43_RS18720 6087b77aea927d65738bb3396fb39f38 129 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 33 112 4.0E-26 T 09-03-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 RG43_RS18720 6087b77aea927d65738bb3396fb39f38 129 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 32 102 7.1E-15 T 09-03-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 RG43_RS10980 caf93bf246e090a79fc16e5507adc1eb 329 Pfam PF02653 Branched-chain amino acid transport system / permease component 59 316 1.3E-45 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RG43_RS07980 e64fd1fe492f22d1e0c5a90e0f5a8b1d 213 SUPERFAMILY SSF53041 1 158 5.89E-30 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RG43_RS07980 e64fd1fe492f22d1e0c5a90e0f5a8b1d 213 ProSitePatterns PS00398 Site-specific recombinases signature 2. 62 74 - T 09-03-2017 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 RG43_RS07980 e64fd1fe492f22d1e0c5a90e0f5a8b1d 213 Pfam PF00239 Resolvase, N terminal domain 4 156 6.3E-35 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RG43_RS07980 e64fd1fe492f22d1e0c5a90e0f5a8b1d 213 Gene3D G3DSA:3.40.50.1390 3 140 4.3E-27 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RG43_RS07980 e64fd1fe492f22d1e0c5a90e0f5a8b1d 213 Gene3D G3DSA:1.10.10.60 158 201 2.0E-8 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS07980 e64fd1fe492f22d1e0c5a90e0f5a8b1d 213 SMART SM00857 3 158 2.6E-41 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RG43_RS19375 e7285612f70885c649cb5709e8de39fc 318 Pfam PF02653 Branched-chain amino acid transport system / permease component 39 305 1.4E-35 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RG43_RS06815 8e1e7360432fd1e9ec9f7cfaf348d65b 229 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 214 2.5E-90 T 09-03-2017 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 RG43_RS06815 8e1e7360432fd1e9ec9f7cfaf348d65b 229 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 09-03-2017 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 RG43_RS06815 8e1e7360432fd1e9ec9f7cfaf348d65b 229 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 40.441 T 09-03-2017 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 RG43_RS06815 8e1e7360432fd1e9ec9f7cfaf348d65b 229 SMART SM00987 49 210 6.7E-42 T 09-03-2017 RG43_RS06815 8e1e7360432fd1e9ec9f7cfaf348d65b 229 Pfam PF03167 Uracil DNA glycosylase superfamily 55 209 2.7E-28 T 09-03-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 RG43_RS06815 8e1e7360432fd1e9ec9f7cfaf348d65b 229 SUPERFAMILY SSF52141 6 220 8.5E-96 T 09-03-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 RG43_RS06815 8e1e7360432fd1e9ec9f7cfaf348d65b 229 SMART SM00986 49 210 6.7E-42 T 09-03-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 RG43_RS06815 8e1e7360432fd1e9ec9f7cfaf348d65b 229 Gene3D G3DSA:3.40.470.10 6 221 2.8E-102 T 09-03-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 RG43_RS00435 909120ebdd36510956c4dd8d98591536 283 Gene3D G3DSA:3.20.20.70 2 283 3.5E-79 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS00435 909120ebdd36510956c4dd8d98591536 283 SUPERFAMILY SSF51569 4 283 4.03E-75 T 09-03-2017 RG43_RS00435 909120ebdd36510956c4dd8d98591536 283 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 281 2.0E-75 T 09-03-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RG43_RS00435 909120ebdd36510956c4dd8d98591536 283 PIRSF PIRSF001359 1 283 1.6E-64 T 09-03-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RG43_RS06530 4c50622d1f0d6d6c99358eb8ce0a5eb9 114 SUPERFAMILY SSF159894 1 111 2.25E-59 T 09-03-2017 RG43_RS06530 4c50622d1f0d6d6c99358eb8ce0a5eb9 114 Pfam PF09400 Protein of unknown function (DUF2002) 1 110 4.8E-61 T 09-03-2017 IPR018994 Protein of unknown function DUF2002 RG43_RS16060 d208e8e31f143518b8384ad29a961797 230 Gene3D G3DSA:3.30.240.20 95 167 1.4E-23 T 09-03-2017 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain RG43_RS16060 d208e8e31f143518b8384ad29a961797 230 Pfam PF04239 Protein of unknown function (DUF421) 104 170 1.2E-15 T 09-03-2017 IPR007353 Protein of unknown function DUF421 RG43_RS22750 fe3f3fe9e9fd4a541905a78c2ba045f0 325 SUPERFAMILY SSF55681 12 320 9.38E-85 T 09-03-2017 RG43_RS22750 fe3f3fe9e9fd4a541905a78c2ba045f0 325 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 17 320 1.0E-132 T 09-03-2017 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 RG43_RS22750 fe3f3fe9e9fd4a541905a78c2ba045f0 325 Gene3D G3DSA:3.30.930.10 15 320 1.3E-74 T 09-03-2017 RG43_RS22750 fe3f3fe9e9fd4a541905a78c2ba045f0 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 31 41 3.4E-6 T 09-03-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RG43_RS22750 fe3f3fe9e9fd4a541905a78c2ba045f0 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 99 116 3.4E-6 T 09-03-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RG43_RS22750 fe3f3fe9e9fd4a541905a78c2ba045f0 325 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 2 325 57.938 T 09-03-2017 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 RG43_RS22750 fe3f3fe9e9fd4a541905a78c2ba045f0 325 Pfam PF00152 tRNA synthetases class II (D, K and N) 15 321 7.4E-47 T 09-03-2017 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 RG43_RS16870 b08a370d5559848c19cd175691508c59 853 TIGRFAM TIGR01541 tape_meas_lam_C: phage tail tape measure protein, lambda family 472 813 1.8E-127 T 09-03-2017 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal RG43_RS16870 b08a370d5559848c19cd175691508c59 853 Pfam PF09718 Lambda phage tail tape-measure protein (Tape_meas_lam_C) 627 701 2.3E-20 T 09-03-2017 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal RG43_RS16870 b08a370d5559848c19cd175691508c59 853 Pfam PF06791 Prophage tail length tape measure protein 54 256 3.4E-65 T 09-03-2017 IPR009628 Bacteriophage lambda, GpH, tail tape measure, N-terminal RG43_RS02770 e6807ec5cc83f681ac62c68c1bc8ef12 67 Hamap MF_01546 Protein AaeX [aaeX]. 1 67 24.567 T 09-03-2017 IPR012451 Protein of unknown function DUF1656 RG43_RS02770 e6807ec5cc83f681ac62c68c1bc8ef12 67 Pfam PF07869 Protein of unknown function (DUF1656) 7 61 3.5E-20 T 09-03-2017 IPR012451 Protein of unknown function DUF1656 RG43_RS19885 28fc13053e5721f91a2bc64957cc341d 93 Pfam PF05449 Putative 3TM holin, Phage_holin_3 10 88 1.8E-23 T 09-03-2017 IPR008473 Putative 3TM holin, Phage holin 3 RG43_RS01995 3e3cc9d2fd97fe78eb91a2207f911780 179 Pfam PF05137 Fimbrial assembly protein (PilN) 99 169 2.6E-8 T 09-03-2017 IPR007813 Fimbrial assembly PilN RG43_RS09105 b549755543ea489dfb9e7a674090cb27 132 Hamap MF_01144 UPF0299 membrane protein YohJ [yohJ]. 4 123 23.829 T 09-03-2017 IPR022957 Uncharacterised protein family UPF0299 RG43_RS09105 b549755543ea489dfb9e7a674090cb27 132 Pfam PF03788 LrgA family 23 113 1.4E-28 T 09-03-2017 IPR005538 LrgA/CidA family GO:0016021 RG43_RS24395 f684da5e1e7f493d398fc39a0be3582d 74 PRINTS PR00618 DksA/TraR zinc finger signature 35 46 4.1E-5 T 09-03-2017 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria RG43_RS24395 f684da5e1e7f493d398fc39a0be3582d 74 PRINTS PR00618 DksA/TraR zinc finger signature 47 59 4.1E-5 T 09-03-2017 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria RG43_RS24395 f684da5e1e7f493d398fc39a0be3582d 74 SUPERFAMILY SSF57716 34 71 9.27E-9 T 09-03-2017 RG43_RS24395 f684da5e1e7f493d398fc39a0be3582d 74 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 35 64 4.1E-11 T 09-03-2017 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 RG43_RS24395 f684da5e1e7f493d398fc39a0be3582d 74 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 3 64 2.1E-22 T 09-03-2017 IPR012783 Zinc finger, C4 DksA/TraR-type RG43_RS24395 f684da5e1e7f493d398fc39a0be3582d 74 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 35 59 - T 09-03-2017 IPR020458 Zinc finger, DksA/TraR C4-type conserved site RG43_RS16740 96aaeda2e4331957aa280da4475fd18d 161 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 2 158 36.996 T 09-03-2017 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type Reactome: R-HSA-947581 RG43_RS16740 96aaeda2e4331957aa280da4475fd18d 161 Pfam PF01967 MoaC family 15 150 4.7E-55 T 09-03-2017 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 RG43_RS16740 96aaeda2e4331957aa280da4475fd18d 161 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 2.5E-74 T 09-03-2017 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 Reactome: R-HSA-947581 RG43_RS16740 96aaeda2e4331957aa280da4475fd18d 161 Gene3D G3DSA:3.30.70.640 3 158 3.5E-70 T 09-03-2017 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 RG43_RS16740 96aaeda2e4331957aa280da4475fd18d 161 SUPERFAMILY SSF55040 11 155 4.84E-62 T 09-03-2017 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 RG43_RS20980 d9d63dc3a499e65f8326e92d4c6a9a12 456 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 09-03-2017 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 RG43_RS20980 d9d63dc3a499e65f8326e92d4c6a9a12 456 PIRSF PIRSF006060 1 452 1.6E-81 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RG43_RS20980 d9d63dc3a499e65f8326e92d4c6a9a12 456 Pfam PF00324 Amino acid permease 18 453 5.5E-132 T 09-03-2017 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 RG43_RS08555 ae3d8467df55159dc40f3a5424b12427 396 TIGRFAM TIGR03379 glycerol3P_GlpC: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit 3 395 3.9E-231 T 09-03-2017 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit GO:0006810|GO:0016020 RG43_RS08555 ae3d8467df55159dc40f3a5424b12427 396 SUPERFAMILY SSF46548 6 82 6.45E-17 T 09-03-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 RG43_RS08555 ae3d8467df55159dc40f3a5424b12427 396 Pfam PF02754 Cysteine-rich domain 163 249 1.1E-15 T 09-03-2017 IPR004017 Cysteine-rich domain RG43_RS08555 ae3d8467df55159dc40f3a5424b12427 396 Pfam PF02754 Cysteine-rich domain 293 376 7.2E-15 T 09-03-2017 IPR004017 Cysteine-rich domain RG43_RS08555 ae3d8467df55159dc40f3a5424b12427 396 Gene3D G3DSA:1.10.1060.10 6 84 5.3E-16 T 09-03-2017 RG43_RS08555 ae3d8467df55159dc40f3a5424b12427 396 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 56 67 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS08555 ae3d8467df55159dc40f3a5424b12427 396 Pfam PF13183 4Fe-4S dicluster domain 6 70 2.6E-10 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS08555 ae3d8467df55159dc40f3a5424b12427 396 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS07780 5ec4215926a23539bb96e9bbc4ec71c7 412 Pfam PF01566 Natural resistance-associated macrophage protein 38 384 6.6E-127 T 09-03-2017 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 RG43_RS07780 5ec4215926a23539bb96e9bbc4ec71c7 412 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 19 377 3.5E-99 T 09-03-2017 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 RG43_RS07780 5ec4215926a23539bb96e9bbc4ec71c7 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 299 318 1.3E-29 T 09-03-2017 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 RG43_RS07780 5ec4215926a23539bb96e9bbc4ec71c7 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 150 171 1.3E-29 T 09-03-2017 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 RG43_RS07780 5ec4215926a23539bb96e9bbc4ec71c7 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 97 123 1.3E-29 T 09-03-2017 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 RG43_RS07780 5ec4215926a23539bb96e9bbc4ec71c7 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 125 144 1.3E-29 T 09-03-2017 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 RG43_RS07780 5ec4215926a23539bb96e9bbc4ec71c7 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 200 223 1.3E-29 T 09-03-2017 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 RG43_RS07780 5ec4215926a23539bb96e9bbc4ec71c7 412 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 1 409 39.079 T 09-03-2017 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 RG43_RS15290 b6838c54123e9fe075b70e12a1379f7e 188 Pfam PF01292 Prokaryotic cytochrome b561 9 180 1.7E-28 T 09-03-2017 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 RG43_RS15290 b6838c54123e9fe075b70e12a1379f7e 188 SUPERFAMILY SSF81342 5 181 1.41E-39 T 09-03-2017 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 RG43_RS15290 b6838c54123e9fe075b70e12a1379f7e 188 Gene3D G3DSA:1.20.950.20 92 174 2.5E-4 T 09-03-2017 RG43_RS16575 8091372ffb1e79ebbdf2a52a58fbf354 295 SUPERFAMILY SSF103481 46 136 1.44E-6 T 09-03-2017 RG43_RS16575 8091372ffb1e79ebbdf2a52a58fbf354 295 SUPERFAMILY SSF103481 185 278 1.63E-10 T 09-03-2017 RG43_RS16575 8091372ffb1e79ebbdf2a52a58fbf354 295 Pfam PF00892 EamA-like transporter family 148 277 6.0E-18 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 RG43_RS19790 aa60207f3671068e51a4e9268327559b 232 Pfam PF05100 Phage minor tail protein L 29 230 1.5E-97 T 09-03-2017 IPR006487 Bacteriophage lambda, GpL, minor tail RG43_RS19790 aa60207f3671068e51a4e9268327559b 232 TIGRFAM TIGR01600 phage_tail_L: phage minor tail protein L 12 230 1.2E-99 T 09-03-2017 IPR006487 Bacteriophage lambda, GpL, minor tail RG43_RS13380 a335b4209c245fdbcce55191b377cef0 313 Gene3D G3DSA:1.10.3720.10 78 307 8.4E-42 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS13380 a335b4209c245fdbcce55191b377cef0 313 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 307 1.8E-16 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS13380 a335b4209c245fdbcce55191b377cef0 313 SUPERFAMILY SSF161098 33 307 4.06E-44 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS13980 bcc9307daa5369a2780b2b4d52ab9316 262 SUPERFAMILY SSF51735 6 253 3.72E-62 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS13980 bcc9307daa5369a2780b2b4d52ab9316 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.0E-8 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS13980 bcc9307daa5369a2780b2b4d52ab9316 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 4.0E-8 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS13980 bcc9307daa5369a2780b2b4d52ab9316 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 4.0E-8 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR RG43_RS13980 bcc9307daa5369a2780b2b4d52ab9316 262 PIRSF PIRSF000094 1 260 3.7E-125 T 09-03-2017 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 RG43_RS13980 bcc9307daa5369a2780b2b4d52ab9316 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 252 6.7E-85 T 09-03-2017 RG43_RS13980 bcc9307daa5369a2780b2b4d52ab9316 262 Gene3D G3DSA:3.40.50.720 2 253 1.1E-61 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS04705 47b4a9135e7714355d1e39c93b2144b4 104 Pfam PF03333 Adhesin biosynthesis transcription regulatory protein 12 96 5.2E-37 T 09-03-2017 IPR004356 Adhesin operon regulatory protein GO:0006355 RG43_RS04705 47b4a9135e7714355d1e39c93b2144b4 104 PRINTS PR01554 Escherichia coli P pili regulatory PapB protein signature 53 69 1.1E-25 T 09-03-2017 IPR004356 Adhesin operon regulatory protein GO:0006355 RG43_RS04705 47b4a9135e7714355d1e39c93b2144b4 104 PRINTS PR01554 Escherichia coli P pili regulatory PapB protein signature 71 86 1.1E-25 T 09-03-2017 IPR004356 Adhesin operon regulatory protein GO:0006355 RG43_RS04705 47b4a9135e7714355d1e39c93b2144b4 104 PRINTS PR01554 Escherichia coli P pili regulatory PapB protein signature 33 48 1.1E-25 T 09-03-2017 IPR004356 Adhesin operon regulatory protein GO:0006355 RG43_RS14595 b43cea945f4bbb6b4bab69153cf2551e 270 Pfam PF13847 Methyltransferase domain 60 152 1.7E-11 T 09-03-2017 IPR025714 Methyltransferase domain RG43_RS14595 b43cea945f4bbb6b4bab69153cf2551e 270 Gene3D G3DSA:3.40.50.150 22 149 1.9E-20 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS14595 b43cea945f4bbb6b4bab69153cf2551e 270 SUPERFAMILY SSF53335 19 226 2.37E-22 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS21360 38b4db6538bce110ff050407026631c8 504 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 14 500 2.3E-127 T 09-03-2017 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 RG43_RS21360 38b4db6538bce110ff050407026631c8 504 Hamap MF_01049 L-carnitine/gamma-butyrobetaine antiporter [caiT]. 1 504 63.245 T 09-03-2017 IPR023449 L-carnitine/gamma-butyrobetaine antiporter CaiT GO:0016020|GO:0044667|GO:1900749|GO:1900751 RG43_RS21360 38b4db6538bce110ff050407026631c8 504 ProSitePatterns PS01303 BCCT family of transporters signature. 315 324 - T 09-03-2017 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 RG43_RS21360 38b4db6538bce110ff050407026631c8 504 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 52 501 1.0E-168 T 09-03-2017 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 RG43_RS04795 d1e9413688add41bd86356d0c02f5707 115 Pfam PF05717 IS66 Orf2 like protein 9 106 3.7E-40 T 09-03-2017 IPR008878 Transposase IS66, Orf2 RG43_RS06935 511ed5f395f9125b5e134b54e34a64b6 211 TIGRFAM TIGR01545 YfhB_g-proteo: HAD hydrolase, family IF 2 211 2.0E-135 T 09-03-2017 IPR006435 HAD-superfamily hydrolase, subfamily IF, YfhB KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668 RG43_RS06935 511ed5f395f9125b5e134b54e34a64b6 211 Pfam PF12710 haloacid dehalogenase-like hydrolase 9 192 2.4E-12 T 09-03-2017 RG43_RS06935 511ed5f395f9125b5e134b54e34a64b6 211 Gene3D G3DSA:3.40.50.1000 99 129 6.8E-5 T 09-03-2017 IPR023214 HAD-like domain RG43_RS06935 511ed5f395f9125b5e134b54e34a64b6 211 Gene3D G3DSA:3.40.50.1000 4 29 6.8E-5 T 09-03-2017 IPR023214 HAD-like domain RG43_RS06935 511ed5f395f9125b5e134b54e34a64b6 211 SUPERFAMILY SSF56784 6 137 2.21E-7 T 09-03-2017 IPR023214 HAD-like domain RG43_RS11580 2eedde793dc0a8408e93a818750e96e3 453 PRINTS PR00095 Anthranilate synthase component I signature 305 318 1.0E-18 T 09-03-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 RG43_RS11580 2eedde793dc0a8408e93a818750e96e3 453 PRINTS PR00095 Anthranilate synthase component I signature 291 304 1.0E-18 T 09-03-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 RG43_RS11580 2eedde793dc0a8408e93a818750e96e3 453 PRINTS PR00095 Anthranilate synthase component I signature 385 399 1.0E-18 T 09-03-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 RG43_RS11580 2eedde793dc0a8408e93a818750e96e3 453 PRINTS PR00095 Anthranilate synthase component I signature 400 414 1.0E-18 T 09-03-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 RG43_RS11580 2eedde793dc0a8408e93a818750e96e3 453 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 107 446 1.6E-142 T 09-03-2017 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 RG43_RS11580 2eedde793dc0a8408e93a818750e96e3 453 Gene3D G3DSA:3.60.120.10 11 452 7.4E-154 T 09-03-2017 IPR005801 ADC synthase GO:0009058 RG43_RS11580 2eedde793dc0a8408e93a818750e96e3 453 Pfam PF04715 Anthranilate synthase component I, N terminal region 22 153 1.5E-28 T 09-03-2017 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 RG43_RS11580 2eedde793dc0a8408e93a818750e96e3 453 SUPERFAMILY SSF56322 4 452 2.35E-147 T 09-03-2017 IPR005801 ADC synthase GO:0009058 RG43_RS11580 2eedde793dc0a8408e93a818750e96e3 453 Pfam PF00425 chorismate binding enzyme 190 443 1.1E-92 T 09-03-2017 IPR015890 Chorismate-utilising enzyme, C-terminal RG43_RS04545 cbe5ddde8721612d1443a7a17c47ff0c 243 Pfam PF11726 Protein of unknown function (DUF3296) 15 233 2.5E-41 T 09-03-2017 IPR021723 Inovirus Gp2 RG43_RS25960 cbe5ddde8721612d1443a7a17c47ff0c 243 Pfam PF11726 Protein of unknown function (DUF3296) 15 233 2.5E-41 T 09-03-2017 IPR021723 Inovirus Gp2 RG43_RS17955 5b079ea9e4215b5e7dd23416f291f49c 262 Pfam PF00795 Carbon-nitrogen hydrolase 3 245 7.8E-38 T 09-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RG43_RS17955 5b079ea9e4215b5e7dd23416f291f49c 262 SUPERFAMILY SSF56317 1 254 6.54E-58 T 09-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RG43_RS17955 5b079ea9e4215b5e7dd23416f291f49c 262 Gene3D G3DSA:3.60.110.10 2 256 2.6E-63 T 09-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RG43_RS17955 5b079ea9e4215b5e7dd23416f291f49c 262 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 143 163 - T 09-03-2017 IPR001110 Uncharacterised protein family UPF0012, conserved site RG43_RS01940 65338d5eb9964fee750975bd284bb586 105 Pfam PF06296 RelE toxin of RelE / RelB toxin-antitoxin system 44 104 5.0E-7 T 09-03-2017 IPR009387 Toxin HigB-2 RG43_RS01940 65338d5eb9964fee750975bd284bb586 105 PIRSF PIRSF039032 1 105 2.5E-39 T 09-03-2017 IPR009387 Toxin HigB-2 RG43_RS03920 7917e5dfe3795ca2a24ff1d5ad8e9e91 19 Pfam PF13956 Toxin Ibs, type I toxin-antitoxin system 1 19 6.8E-12 T 09-03-2017 IPR025881 Toxin Ibs RG43_RS26295 7917e5dfe3795ca2a24ff1d5ad8e9e91 19 Pfam PF13956 Toxin Ibs, type I toxin-antitoxin system 1 19 6.8E-12 T 09-03-2017 IPR025881 Toxin Ibs RG43_RS25675 5ead7332b2e590892871a22450e06376 270 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 237 1.0E-31 T 09-03-2017 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 RG43_RS25675 5ead7332b2e590892871a22450e06376 270 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 264 1.1E-76 T 09-03-2017 IPR000150 Cof protein GO:0016787 RG43_RS25675 5ead7332b2e590892871a22450e06376 270 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 264 1.9E-67 T 09-03-2017 IPR023214 HAD-like domain RG43_RS25675 5ead7332b2e590892871a22450e06376 270 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 09-03-2017 IPR000150 Cof protein GO:0016787 RG43_RS25675 5ead7332b2e590892871a22450e06376 270 Gene3D G3DSA:3.30.1240.10 88 183 3.1E-41 T 09-03-2017 RG43_RS25675 5ead7332b2e590892871a22450e06376 270 Gene3D G3DSA:3.40.50.1000 1 76 4.0E-61 T 09-03-2017 IPR023214 HAD-like domain RG43_RS25675 5ead7332b2e590892871a22450e06376 270 Gene3D G3DSA:3.40.50.1000 184 269 4.0E-61 T 09-03-2017 IPR023214 HAD-like domain RG43_RS25675 5ead7332b2e590892871a22450e06376 270 SUPERFAMILY SSF56784 1 269 1.88E-76 T 09-03-2017 IPR023214 HAD-like domain RG43_RS25675 5ead7332b2e590892871a22450e06376 270 ProSitePatterns PS01229 Hypothetical cof family signature 2. 218 240 - T 09-03-2017 RG43_RS22745 56cb95bf17ef007b665cbc7fd1721be4 500 PIRSF PIRSF006060 1 499 5.3E-65 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RG43_RS22745 56cb95bf17ef007b665cbc7fd1721be4 500 Pfam PF13520 Amino acid permease 9 468 6.5E-28 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RG43_RS25670 291518d0891b824c95723124f681642d 135 Pfam PF06078 Bacterial protein of unknown function (DUF937) 12 110 2.8E-11 T 09-03-2017 IPR009282 Protein of unknown function DUF937 RG43_RS25670 291518d0891b824c95723124f681642d 135 SUPERFAMILY SSF140804 6 133 1.57E-34 T 09-03-2017 IPR027405 YidB-like RG43_RS25670 291518d0891b824c95723124f681642d 135 Gene3D G3DSA:1.10.10.690 2 134 3.2E-47 T 09-03-2017 IPR027405 YidB-like RG43_RS02915 0b0d87592956d7cb8c345679bc86a9ec 217 SUPERFAMILY SSF52317 1 216 4.08E-66 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like RG43_RS02915 0b0d87592956d7cb8c345679bc86a9ec 217 PIRSF PIRSF006320 1 216 8.0E-107 T 09-03-2017 IPR026041 Glyoxalase ElbB RG43_RS02915 0b0d87592956d7cb8c345679bc86a9ec 217 Gene3D G3DSA:3.40.50.880 1 216 7.2E-103 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like RG43_RS24450 93ba876a53de13a9ff534aabf311b1e8 224 Pfam PF03475 3-alpha domain 169 211 1.5E-14 T 09-03-2017 IPR005163 3-alpha domain RG43_RS24450 93ba876a53de13a9ff534aabf311b1e8 224 Gene3D G3DSA:2.40.33.20 4 223 1.4E-87 T 09-03-2017 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like RG43_RS24450 93ba876a53de13a9ff534aabf311b1e8 224 Pfam PF03473 MOSC domain 47 159 6.5E-21 T 09-03-2017 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 RG43_RS24450 93ba876a53de13a9ff534aabf311b1e8 224 SUPERFAMILY SSF50800 3 223 1.78E-76 T 09-03-2017 IPR011037 Pyruvate kinase-like, insert domain RG43_RS08380 ae0700384201c95c88810a02dd3a21f9 180 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 16 137 7.2E-52 T 09-03-2017 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08380 ae0700384201c95c88810a02dd3a21f9 180 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 1 163 26.93 T 09-03-2017 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08380 ae0700384201c95c88810a02dd3a21f9 180 Gene3D G3DSA:3.30.70.20 27 117 1.0E-18 T 09-03-2017 RG43_RS08380 ae0700384201c95c88810a02dd3a21f9 180 Pfam PF12838 4Fe-4S dicluster domain 59 113 1.3E-11 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS08380 ae0700384201c95c88810a02dd3a21f9 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS08380 ae0700384201c95c88810a02dd3a21f9 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 60 71 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS08380 ae0700384201c95c88810a02dd3a21f9 180 SUPERFAMILY SSF54862 33 153 5.44E-29 T 09-03-2017 RG43_RS16265 5498ec6c5f440eae8ba44a259616e8a7 476 Pfam PF11066 Protein of unknown function (DUF2867) 331 463 3.4E-12 T 09-03-2017 IPR021295 Protein of unknown function DUF2867 RG43_RS16265 5498ec6c5f440eae8ba44a259616e8a7 476 SUPERFAMILY SSF55961 333 473 2.56E-5 T 09-03-2017 RG43_RS16265 5498ec6c5f440eae8ba44a259616e8a7 476 SUPERFAMILY SSF51735 3 294 1.92E-48 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS16265 5498ec6c5f440eae8ba44a259616e8a7 476 Gene3D G3DSA:3.40.50.720 3 221 5.6E-37 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS16265 5498ec6c5f440eae8ba44a259616e8a7 476 Pfam PF13460 NAD(P)H-binding 9 158 1.2E-16 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS12865 b839dcd577d05b14055df51576833536 72 Pfam PF13999 MarB protein 6 70 5.9E-32 T 09-03-2017 IPR025732 MarB protein RG43_RS12865 b839dcd577d05b14055df51576833536 72 ProDom PD027692 ANTIBIOTIC RESISTANCE MULTIPLE MARB 1 72 9.0E-25 T 09-03-2017 IPR025732 MarB protein RG43_RS10695 4df0b754aaa2f686eee438396b123a95 121 Pfam PF04347 Flagellar biosynthesis protein, FliO 37 116 2.5E-19 T 09-03-2017 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 RG43_RS10695 4df0b754aaa2f686eee438396b123a95 121 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 25 93 6.8E-23 T 09-03-2017 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 RG43_RS07360 8d841e0474b30257f6ea30847a91b30a 344 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 9 343 39.586 T 09-03-2017 IPR014524 Outer membrane protein assembly factor BamC RG43_RS07360 8d841e0474b30257f6ea30847a91b30a 344 PIRSF PIRSF026343 9 344 1.2E-150 T 09-03-2017 IPR014524 Outer membrane protein assembly factor BamC RG43_RS07360 8d841e0474b30257f6ea30847a91b30a 344 Pfam PF06804 NlpB/DapX lipoprotein 41 342 6.5E-112 T 09-03-2017 IPR010653 NlpB/DapX lipoprotein RG43_RS06800 2eb7ca02cdf7fbcb62e7e56440ac1740 232 Pfam PF03942 DTW domain 30 211 6.5E-43 T 09-03-2017 IPR005636 DTW RG43_RS06800 2eb7ca02cdf7fbcb62e7e56440ac1740 232 SMART SM01144 27 218 1.7E-71 T 09-03-2017 IPR005636 DTW RG43_RS00995 d895ae25e115bd29a68cfe1dd276a3b6 187 Gene3D G3DSA:1.10.340.30 1 182 3.8E-89 T 09-03-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 RG43_RS00995 d895ae25e115bd29a68cfe1dd276a3b6 187 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 2 182 5.9E-97 T 09-03-2017 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 RG43_RS00995 d895ae25e115bd29a68cfe1dd276a3b6 187 Pfam PF03352 Methyladenine glycosylase 6 181 1.6E-82 T 09-03-2017 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 RG43_RS00995 d895ae25e115bd29a68cfe1dd276a3b6 187 SUPERFAMILY SSF48150 2 184 1.45E-83 T 09-03-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 RG43_RS13480 73bbb2551025f853cab32a70e147e474 551 Hamap MF_01068 Glucans biosynthesis protein D [mdoD]. 1 544 60.853 T 09-03-2017 IPR023724 Glucan biosynthesis, MdoD RG43_RS13480 73bbb2551025f853cab32a70e147e474 551 SUPERFAMILY SSF81296 423 536 4.13E-27 T 09-03-2017 IPR014756 Immunoglobulin E-set RG43_RS13480 73bbb2551025f853cab32a70e147e474 551 Gene3D G3DSA:2.60.40.10 423 545 1.9E-31 T 09-03-2017 IPR013783 Immunoglobulin-like fold RG43_RS13480 73bbb2551025f853cab32a70e147e474 551 SUPERFAMILY SSF74650 45 421 5.65E-146 T 09-03-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 RG43_RS13480 73bbb2551025f853cab32a70e147e474 551 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 2 32 9.0E-4 T 09-03-2017 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RG43_RS13480 73bbb2551025f853cab32a70e147e474 551 Gene3D G3DSA:2.70.98.10 44 422 1.3E-160 T 09-03-2017 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 RG43_RS13480 73bbb2551025f853cab32a70e147e474 551 PIRSF PIRSF006281 1 538 4.0E-207 T 09-03-2017 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D RG43_RS13480 73bbb2551025f853cab32a70e147e474 551 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 45 534 1.7E-180 T 09-03-2017 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 RG43_RS22045 dcda306ed3d546490d5e7ef41137bdcc 176 Pfam PF00419 Fimbrial protein 28 176 6.9E-21 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS22045 dcda306ed3d546490d5e7ef41137bdcc 176 Gene3D G3DSA:2.60.40.1090 26 176 9.0E-42 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS22045 dcda306ed3d546490d5e7ef41137bdcc 176 SUPERFAMILY SSF49401 33 176 8.45E-35 T 09-03-2017 IPR008966 Adhesion domain RG43_RS18975 0f989cb4ded1725ecbe0c226112d9e2b 193 PIRSF PIRSF011489 1 193 6.2E-86 T 09-03-2017 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 RG43_RS18975 0f989cb4ded1725ecbe0c226112d9e2b 193 Hamap MF_01950 Acyl carrier protein phosphodiesterase [acpH]. 1 193 56.615 T 09-03-2017 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 RG43_RS18975 0f989cb4ded1725ecbe0c226112d9e2b 193 Pfam PF04336 Protein of unknown function, DUF479 81 185 8.9E-29 T 09-03-2017 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 RG43_RS01435 c2a2a507453813d4db15fd2112a4401d 111 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 39.999 T 09-03-2017 IPR019598 Universal stress protein B RG43_RS01435 c2a2a507453813d4db15fd2112a4401d 111 Pfam PF10625 Universal stress protein B (UspB) 1 106 6.3E-55 T 09-03-2017 IPR019598 Universal stress protein B RG43_RS25260 f9de714674d1b64ac6831b260f357baa 93 Pfam PF13616 PPIC-type PPIASE domain 15 90 1.4E-20 T 09-03-2017 RG43_RS25260 f9de714674d1b64ac6831b260f357baa 93 Gene3D G3DSA:3.10.50.40 5 91 3.3E-34 T 09-03-2017 RG43_RS25260 f9de714674d1b64ac6831b260f357baa 93 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 31 51 - T 09-03-2017 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-936440 RG43_RS25260 f9de714674d1b64ac6831b260f357baa 93 SUPERFAMILY SSF54534 5 90 2.03E-28 T 09-03-2017 RG43_RS10995 b72fcf61d86f6ef4e9e3b2c590f97a21 142 Gene3D G3DSA:3.40.50.620 3 138 5.4E-25 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS10995 b72fcf61d86f6ef4e9e3b2c590f97a21 142 PIRSF PIRSF006276 1 141 1.0E-44 T 09-03-2017 IPR006015 Universal stress protein A RG43_RS10995 b72fcf61d86f6ef4e9e3b2c590f97a21 142 SUPERFAMILY SSF52402 3 138 1.26E-24 T 09-03-2017 RG43_RS10995 b72fcf61d86f6ef4e9e3b2c590f97a21 142 Pfam PF00582 Universal stress protein family 3 138 1.5E-16 T 09-03-2017 IPR006016 UspA GO:0006950 RG43_RS09835 7126d61c36036d5fcc00115c81e910a0 60 Pfam PF10662 Ethanolamine utilisation - propanediol utilisation 1 54 7.7E-12 T 09-03-2017 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 RG43_RS09835 7126d61c36036d5fcc00115c81e910a0 60 Gene3D G3DSA:3.40.50.300 2 53 1.4E-6 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS09835 7126d61c36036d5fcc00115c81e910a0 60 SUPERFAMILY SSF52540 2 54 1.15E-6 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS02230 ef1fc8010739057d521c2c08f6fa32f9 240 Pfam PF08348 YheO-like PAS domain 29 137 2.2E-35 T 09-03-2017 IPR013559 YheO-like RG43_RS02230 ef1fc8010739057d521c2c08f6fa32f9 240 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 27 153 6.0E-71 T 09-03-2017 IPR013559 YheO-like RG43_RS02230 ef1fc8010739057d521c2c08f6fa32f9 240 Pfam PF13309 HTH domain 171 228 2.9E-19 T 09-03-2017 RG43_RS08395 f38e710b16f7331812d48881345e993c 613 Pfam PF00361 Proton-conducting membrane transporter 133 425 2.6E-99 T 09-03-2017 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08395 f38e710b16f7331812d48881345e993c 613 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 2 610 3.8E-239 T 09-03-2017 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08395 f38e710b16f7331812d48881345e993c 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 247 273 3.6E-55 T 09-03-2017 RG43_RS08395 f38e710b16f7331812d48881345e993c 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 110 130 3.6E-55 T 09-03-2017 RG43_RS08395 f38e710b16f7331812d48881345e993c 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 157 178 3.6E-55 T 09-03-2017 RG43_RS08395 f38e710b16f7331812d48881345e993c 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 82 107 3.6E-55 T 09-03-2017 RG43_RS08395 f38e710b16f7331812d48881345e993c 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 225 246 3.6E-55 T 09-03-2017 RG43_RS08395 f38e710b16f7331812d48881345e993c 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 418 437 3.6E-55 T 09-03-2017 RG43_RS08395 f38e710b16f7331812d48881345e993c 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 315 327 3.6E-55 T 09-03-2017 RG43_RS08395 f38e710b16f7331812d48881345e993c 613 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 64 121 9.9E-24 T 09-03-2017 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08395 f38e710b16f7331812d48881345e993c 613 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 84 104 1.9E-11 T 09-03-2017 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RG43_RS08395 f38e710b16f7331812d48881345e993c 613 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 265 287 1.9E-11 T 09-03-2017 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RG43_RS08395 f38e710b16f7331812d48881345e993c 613 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 417 439 1.9E-11 T 09-03-2017 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RG43_RS08395 f38e710b16f7331812d48881345e993c 613 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 58 82 1.9E-11 T 09-03-2017 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RG43_RS01215 4d51c3be4aaccef78da4853411aa541b 337 TIGRFAM TIGR00766 TIGR00766: inner membrane protein YhjD 52 326 1.4E-136 T 09-03-2017 IPR005274 Inner membrane protein YhjD RG43_RS01215 4d51c3be4aaccef78da4853411aa541b 337 Pfam PF03631 Virulence factor BrkB 66 325 6.0E-52 T 09-03-2017 IPR017039 Virulence factor BrkB RG43_RS01215 4d51c3be4aaccef78da4853411aa541b 337 PIRSF PIRSF035875 35 329 2.9E-23 T 09-03-2017 IPR017039 Virulence factor BrkB RG43_RS05165 0e95d9058728eda4dbe930caf65005d8 261 Gene3D G3DSA:3.90.226.10 2 200 3.0E-47 T 09-03-2017 IPR029045 ClpP/crotonase-like domain RG43_RS05165 0e95d9058728eda4dbe930caf65005d8 261 SUPERFAMILY SSF52096 1 260 6.01E-62 T 09-03-2017 IPR029045 ClpP/crotonase-like domain RG43_RS05165 0e95d9058728eda4dbe930caf65005d8 261 Gene3D G3DSA:1.10.12.10 203 260 2.6E-17 T 09-03-2017 IPR014748 Crontonase, C-terminal RG43_RS05165 0e95d9058728eda4dbe930caf65005d8 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 259 5.5E-47 T 09-03-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RG43_RS05165 0e95d9058728eda4dbe930caf65005d8 261 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 100 120 - T 09-03-2017 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 RG43_RS06080 18e1fde1cb4a547e41142b9bf9c18ff8 97 Pfam PF09707 CRISPR-associated protein (Cas_Cas2CT1978) 3 88 5.8E-37 T 09-03-2017 IPR010152 CRISPR-associated protein Cas2 subtype RG43_RS06080 18e1fde1cb4a547e41142b9bf9c18ff8 97 TIGRFAM TIGR01873 cas_CT1978: CRISPR-associated endoribonuclease Cas2, subtype I-E/ECOLI 3 88 8.7E-40 T 09-03-2017 IPR010152 CRISPR-associated protein Cas2 subtype RG43_RS22165 4c7f4d37ee5f227c696235bc2b2d9035 147 Gene3D G3DSA:3.40.50.10110 1 144 1.1E-52 T 09-03-2017 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 RG43_RS22165 4c7f4d37ee5f227c696235bc2b2d9035 147 SUPERFAMILY SSF102400 1 145 3.53E-47 T 09-03-2017 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 RG43_RS22165 4c7f4d37ee5f227c696235bc2b2d9035 147 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 141 4.1E-39 T 09-03-2017 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 RG43_RS24050 de3121575157a251ddf3dcfd30a85904 517 ProSitePatterns PS00786 5'-nucleotidase signature 2. 104 115 - T 09-03-2017 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS24050 de3121575157a251ddf3dcfd30a85904 517 SUPERFAMILY SSF56300 25 328 2.81E-74 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like RG43_RS24050 de3121575157a251ddf3dcfd30a85904 517 Pfam PF00149 Calcineurin-like phosphoesterase 27 254 1.1E-10 T 09-03-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RG43_RS24050 de3121575157a251ddf3dcfd30a85904 517 Gene3D G3DSA:3.60.21.10 25 328 1.5E-78 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like RG43_RS24050 de3121575157a251ddf3dcfd30a85904 517 PRINTS PR01607 Apyrase family signature 451 470 5.0E-27 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS24050 de3121575157a251ddf3dcfd30a85904 517 PRINTS PR01607 Apyrase family signature 202 219 5.0E-27 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS24050 de3121575157a251ddf3dcfd30a85904 517 PRINTS PR01607 Apyrase family signature 24 42 5.0E-27 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS24050 de3121575157a251ddf3dcfd30a85904 517 PRINTS PR01607 Apyrase family signature 237 260 5.0E-27 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS24050 de3121575157a251ddf3dcfd30a85904 517 PRINTS PR01607 Apyrase family signature 265 285 5.0E-27 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS24050 de3121575157a251ddf3dcfd30a85904 517 PRINTS PR01607 Apyrase family signature 381 404 5.0E-27 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS24050 de3121575157a251ddf3dcfd30a85904 517 Pfam PF02872 5'-nucleotidase, C-terminal domain 330 476 3.3E-36 T 09-03-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS24050 de3121575157a251ddf3dcfd30a85904 517 Gene3D G3DSA:3.90.780.10 330 512 1.7E-48 T 09-03-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS24050 de3121575157a251ddf3dcfd30a85904 517 SUPERFAMILY SSF55816 329 513 5.23E-51 T 09-03-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RG43_RS04855 e1a179304fb08db68713be56cfcd2783 499 Pfam PF00884 Sulfatase 193 445 1.2E-28 T 09-03-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RG43_RS04855 e1a179304fb08db68713be56cfcd2783 499 Pfam PF08019 Domain of unknown function (DUF1705) 44 172 3.8E-6 T 09-03-2017 IPR012549 Domain of unknown function DUF1705 GO:0016021 RG43_RS04855 e1a179304fb08db68713be56cfcd2783 499 SUPERFAMILY SSF53649 194 459 4.19E-19 T 09-03-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RG43_RS04855 e1a179304fb08db68713be56cfcd2783 499 Gene3D G3DSA:3.40.720.10 257 444 2.0E-9 T 09-03-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RG43_RS17480 1f8e5f6ccb931658a7d0407519b276a7 247 Gene3D G3DSA:3.40.1390.30 1 107 1.5E-40 T 09-03-2017 RG43_RS17480 1f8e5f6ccb931658a7d0407519b276a7 247 SUPERFAMILY SSF102705 1 246 4.84E-85 T 09-03-2017 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 RG43_RS17480 1f8e5f6ccb931658a7d0407519b276a7 247 Gene3D G3DSA:3.40.1390.30 108 214 1.8E-29 T 09-03-2017 RG43_RS17480 1f8e5f6ccb931658a7d0407519b276a7 247 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 234 2.3E-57 T 09-03-2017 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 RG43_RS17480 1f8e5f6ccb931658a7d0407519b276a7 247 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 246 4.3E-83 T 09-03-2017 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 RG43_RS13415 fcf828ed60f2db2fdf260d2f24cf0d33 653 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 09-03-2017 IPR001539 Peptidase U32 GO:0006508|GO:0008233 RG43_RS13415 fcf828ed60f2db2fdf260d2f24cf0d33 653 Pfam PF12392 Collagenase 391 505 2.0E-18 T 09-03-2017 IPR020988 Peptidase U32, collagenase RG43_RS13415 fcf828ed60f2db2fdf260d2f24cf0d33 653 Pfam PF01136 Peptidase family U32 79 305 1.2E-71 T 09-03-2017 IPR001539 Peptidase U32 GO:0006508|GO:0008233 RG43_RS02980 4639ef5a46d5eab0f9377624062afe7e 325 Pfam PF01699 Sodium/calcium exchanger protein 4 143 3.9E-28 T 09-03-2017 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 RG43_RS02980 4639ef5a46d5eab0f9377624062afe7e 325 Pfam PF01699 Sodium/calcium exchanger protein 175 317 2.4E-26 T 09-03-2017 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 RG43_RS02980 4639ef5a46d5eab0f9377624062afe7e 325 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 2 312 1.3E-106 T 09-03-2017 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 RG43_RS02745 1e6bfc0cd62a89ceeb6b41d30b35689f 197 Pfam PF02545 Maf-like protein 4 184 6.7E-60 T 09-03-2017 IPR003697 Maf-like protein GO:0005737 RG43_RS02745 1e6bfc0cd62a89ceeb6b41d30b35689f 197 PIRSF PIRSF006305 1 191 8.2E-58 T 09-03-2017 IPR003697 Maf-like protein GO:0005737 RG43_RS02745 1e6bfc0cd62a89ceeb6b41d30b35689f 197 Hamap MF_00528 Septum formation protein Maf [maf]. 3 189 33.072 T 09-03-2017 IPR003697 Maf-like protein GO:0005737 RG43_RS02745 1e6bfc0cd62a89ceeb6b41d30b35689f 197 SUPERFAMILY SSF52972 2 184 3.4E-64 T 09-03-2017 IPR029001 Inosine triphosphate pyrophosphatase-like RG43_RS02745 1e6bfc0cd62a89ceeb6b41d30b35689f 197 Gene3D G3DSA:3.90.950.10 2 185 1.3E-72 T 09-03-2017 IPR029001 Inosine triphosphate pyrophosphatase-like RG43_RS02745 1e6bfc0cd62a89ceeb6b41d30b35689f 197 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 182 2.9E-76 T 09-03-2017 IPR003697 Maf-like protein GO:0005737 RG43_RS22435 db96ef708de1f00418fe452a7f376a05 467 Pfam PF00324 Amino acid permease 27 466 1.4E-121 T 09-03-2017 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 RG43_RS22435 db96ef708de1f00418fe452a7f376a05 467 ProSitePatterns PS00218 Amino acid permeases signature. 52 82 - T 09-03-2017 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 RG43_RS22435 db96ef708de1f00418fe452a7f376a05 467 PIRSF PIRSF006060 1 467 6.0E-70 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RG43_RS13275 6238c38b2259e2bc2f2876c88313584b 150 SUPERFAMILY SSF55724 1 142 5.02E-32 T 09-03-2017 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich Reactome: R-HSA-5576892 RG43_RS13275 6238c38b2259e2bc2f2876c88313584b 150 Gene3D G3DSA:3.40.1000.10 1 145 2.1E-36 T 09-03-2017 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich Reactome: R-HSA-5576892 RG43_RS13275 6238c38b2259e2bc2f2876c88313584b 150 Pfam PF08786 Domain of unknown function (DUF1795) 19 137 7.2E-26 T 09-03-2017 IPR014894 Protein DcrB RG43_RS12335 6a663e41d5a28c7acd663cce9cef41ba 382 PIRSF PIRSF003085 2 381 2.8E-130 T 09-03-2017 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 RG43_RS12335 6a663e41d5a28c7acd663cce9cef41ba 382 Pfam PF02353 Mycolic acid cyclopropane synthetase 108 368 3.2E-106 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS12335 6a663e41d5a28c7acd663cce9cef41ba 382 Gene3D G3DSA:3.40.50.150 117 371 7.6E-96 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS12335 6a663e41d5a28c7acd663cce9cef41ba 382 SUPERFAMILY SSF53335 117 373 4.53E-79 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS22820 df0b8ee5e7a745d5436e69b6b5cfc2cb 289 Pfam PF15922 YjeJ-like 1 283 1.4E-152 T 09-03-2017 IPR031810 YjeJ-like RG43_RS11655 c23d797554c71c0628a61b95af622d97 212 PIRSF PIRSF006324 4 212 1.7E-64 T 09-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RG43_RS11655 c23d797554c71c0628a61b95af622d97 212 Pfam PF01810 LysE type translocator 18 209 9.8E-59 T 09-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RG43_RS19405 46ffe68ff9ea9998381598557e252d49 316 Pfam PF00696 Amino acid kinase family 4 296 9.9E-26 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase RG43_RS19405 46ffe68ff9ea9998381598557e252d49 316 SUPERFAMILY SSF53633 3 313 2.75E-73 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase RG43_RS19405 46ffe68ff9ea9998381598557e252d49 316 Gene3D G3DSA:3.40.1160.10 1 315 7.8E-100 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase RG43_RS19405 46ffe68ff9ea9998381598557e252d49 316 PRINTS PR01469 Bacterial carbamate kinase signature 77 95 2.8E-60 T 09-03-2017 RG43_RS19405 46ffe68ff9ea9998381598557e252d49 316 PRINTS PR01469 Bacterial carbamate kinase signature 184 202 2.8E-60 T 09-03-2017 RG43_RS19405 46ffe68ff9ea9998381598557e252d49 316 PRINTS PR01469 Bacterial carbamate kinase signature 215 230 2.8E-60 T 09-03-2017 RG43_RS19405 46ffe68ff9ea9998381598557e252d49 316 PRINTS PR01469 Bacterial carbamate kinase signature 270 285 2.8E-60 T 09-03-2017 RG43_RS19405 46ffe68ff9ea9998381598557e252d49 316 PRINTS PR01469 Bacterial carbamate kinase signature 111 130 2.8E-60 T 09-03-2017 RG43_RS19405 46ffe68ff9ea9998381598557e252d49 316 PRINTS PR01469 Bacterial carbamate kinase signature 161 180 2.8E-60 T 09-03-2017 RG43_RS19405 46ffe68ff9ea9998381598557e252d49 316 PRINTS PR01469 Bacterial carbamate kinase signature 44 63 2.8E-60 T 09-03-2017 RG43_RS19405 46ffe68ff9ea9998381598557e252d49 316 PIRSF PIRSF000723 1 315 4.8E-131 T 09-03-2017 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 RG43_RS26410 1ff86aeb94ece609fdc13b4b3a25638e 374 Pfam PF13449 Esterase-like activity of phytase 43 354 1.7E-67 T 09-03-2017 IPR027372 Phytase-like domain RG43_RS26410 1ff86aeb94ece609fdc13b4b3a25638e 374 Gene3D G3DSA:2.130.10.10 105 299 1.2E-4 T 09-03-2017 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RG43_RS04035 1ff86aeb94ece609fdc13b4b3a25638e 374 Pfam PF13449 Esterase-like activity of phytase 43 354 1.7E-67 T 09-03-2017 IPR027372 Phytase-like domain RG43_RS04035 1ff86aeb94ece609fdc13b4b3a25638e 374 Gene3D G3DSA:2.130.10.10 105 299 1.2E-4 T 09-03-2017 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RG43_RS24825 d13b96f277bdc0e5fde0c1cb180b1c95 258 Pfam PF00902 Sec-independent protein translocase protein (TatC) 12 221 2.6E-67 T 09-03-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RG43_RS24825 d13b96f277bdc0e5fde0c1cb180b1c95 258 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 8 35 1.1E-50 T 09-03-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RG43_RS24825 d13b96f277bdc0e5fde0c1cb180b1c95 258 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 154 182 1.1E-50 T 09-03-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RG43_RS24825 d13b96f277bdc0e5fde0c1cb180b1c95 258 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 85 103 1.1E-50 T 09-03-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RG43_RS24825 d13b96f277bdc0e5fde0c1cb180b1c95 258 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 103 129 1.1E-50 T 09-03-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RG43_RS24825 d13b96f277bdc0e5fde0c1cb180b1c95 258 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 4 243 18.256 T 09-03-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RG43_RS24825 d13b96f277bdc0e5fde0c1cb180b1c95 258 ProSitePatterns PS01218 TatC family signature. 154 173 - T 09-03-2017 IPR019820 Sec-independent periplasmic protein translocase, conserved site RG43_RS24825 d13b96f277bdc0e5fde0c1cb180b1c95 258 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 9 226 7.6E-81 T 09-03-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RG43_RS07900 ea48d201fc6e5c792fcb097af8cd939a 381 Gene3D G3DSA:3.40.50.10540 309 378 9.0E-98 T 09-03-2017 IPR023606 CoA-transferase family III domain RG43_RS07900 ea48d201fc6e5c792fcb097af8cd939a 381 Gene3D G3DSA:3.40.50.10540 7 220 9.0E-98 T 09-03-2017 IPR023606 CoA-transferase family III domain RG43_RS07900 ea48d201fc6e5c792fcb097af8cd939a 381 SUPERFAMILY SSF89796 8 378 1.1E-121 T 09-03-2017 IPR023606 CoA-transferase family III domain RG43_RS07900 ea48d201fc6e5c792fcb097af8cd939a 381 Pfam PF02515 CoA-transferase family III 11 361 1.6E-113 T 09-03-2017 IPR003673 CoA-transferase family III GO:0003824 RG43_RS07900 ea48d201fc6e5c792fcb097af8cd939a 381 Gene3D G3DSA:3.30.1540.10 226 308 5.2E-25 T 09-03-2017 RG43_RS00025 308be6c3025a478923ec08fd6b65553c 144 Pfam PF00816 H-NS histone family 47 126 4.9E-14 T 09-03-2017 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 RG43_RS00025 308be6c3025a478923ec08fd6b65553c 144 SMART SM00528 87 133 1.2E-10 T 09-03-2017 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 RG43_RS00025 308be6c3025a478923ec08fd6b65553c 144 SUPERFAMILY SSF81273 96 133 8.63E-8 T 09-03-2017 RG43_RS00025 308be6c3025a478923ec08fd6b65553c 144 Gene3D G3DSA:4.10.430.10 96 134 6.7E-17 T 09-03-2017 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 RG43_RS25575 510b0ea35c4ec46addd9d54134b90645 445 PIRSF PIRSF005353 5 444 2.1E-177 T 09-03-2017 IPR026033 Purine permease PbuG-like RG43_RS25575 510b0ea35c4ec46addd9d54134b90645 445 Pfam PF00860 Permease family 31 404 2.4E-42 T 09-03-2017 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RG43_RS19720 81348d91a5c73a134f31193c2bbe6240 69 Gene3D G3DSA:3.30.420.10 3 59 4.0E-11 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS19720 81348d91a5c73a134f31193c2bbe6240 69 SUPERFAMILY SSF53098 3 66 2.66E-13 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS19720 81348d91a5c73a134f31193c2bbe6240 69 Pfam PF13683 Integrase core domain 3 58 8.4E-16 T 09-03-2017 IPR001584 Integrase, catalytic core GO:0015074 RG43_RS20090 aab33f62745be0a69896f8f78afb0423 255 SUPERFAMILY SSF56235 2 253 1.2E-52 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal RG43_RS20090 aab33f62745be0a69896f8f78afb0423 255 Gene3D G3DSA:3.60.20.10 1 246 1.1E-67 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal RG43_RS20090 aab33f62745be0a69896f8f78afb0423 255 Pfam PF13230 Glutamine amidotransferases class-II 1 252 9.9E-115 T 09-03-2017 IPR026869 Putative glutamine amidotransferase type 2 RG43_RS15990 317e6e64ae35dcfe396d5c4d95d2ae4b 259 Pfam PF02698 DUF218 domain 80 213 3.7E-28 T 09-03-2017 IPR003848 Domain of unknown function DUF218 RG43_RS15990 317e6e64ae35dcfe396d5c4d95d2ae4b 259 Gene3D G3DSA:3.40.50.620 74 210 1.6E-17 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS08945 88bb718b03f0b7e5cda8def623d4b339 393 Gene3D G3DSA:1.20.1250.20 19 199 6.2E-19 T 09-03-2017 RG43_RS08945 88bb718b03f0b7e5cda8def623d4b339 393 Gene3D G3DSA:1.20.1250.20 213 391 1.4E-24 T 09-03-2017 RG43_RS08945 88bb718b03f0b7e5cda8def623d4b339 393 Pfam PF07690 Major Facilitator Superfamily 21 356 1.0E-36 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS08945 88bb718b03f0b7e5cda8def623d4b339 393 SUPERFAMILY SSF103473 19 390 8.76E-51 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS08945 88bb718b03f0b7e5cda8def623d4b339 393 TIGRFAM TIGR00899 2A0120: sugar efflux transporter 19 392 1.2E-197 T 09-03-2017 IPR004750 Sugar efflux GO:0008643|GO:0015542|GO:0016021 RG43_RS21385 d7ae631a5f9f0b87bbbe86dfac0428fe 196 SUPERFAMILY SSF51161 3 166 4.44E-41 T 09-03-2017 IPR011004 Trimeric LpxA-like RG43_RS21385 d7ae631a5f9f0b87bbbe86dfac0428fe 196 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 41 2.5E-5 T 09-03-2017 IPR001451 Hexapeptide repeat RG43_RS21385 d7ae631a5f9f0b87bbbe86dfac0428fe 196 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 88 122 1.1E-7 T 09-03-2017 IPR001451 Hexapeptide repeat RG43_RS21385 d7ae631a5f9f0b87bbbe86dfac0428fe 196 Hamap MF_01525 Carnitine operon protein CaiE [caiE]. 1 196 66.248 T 09-03-2017 IPR023446 Carnitine operon protein CaiE RG43_RS21385 d7ae631a5f9f0b87bbbe86dfac0428fe 196 Gene3D G3DSA:2.160.10.10 4 165 2.0E-38 T 09-03-2017 RG43_RS19920 370ef5dc2bd7113eacc610badb34dd6b 108 Pfam PF01726 LexA DNA binding domain 1 65 2.5E-19 T 09-03-2017 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 RG43_RS19920 370ef5dc2bd7113eacc610badb34dd6b 108 SUPERFAMILY SSF46785 3 69 7.39E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS19920 370ef5dc2bd7113eacc610badb34dd6b 108 Gene3D G3DSA:1.10.10.10 1 68 1.2E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS20720 f82fe69b6ddcc6d0d2ecb5596b859874 266 Gene3D G3DSA:3.40.50.1980 24 138 5.3E-34 T 09-03-2017 RG43_RS20720 f82fe69b6ddcc6d0d2ecb5596b859874 266 Gene3D G3DSA:3.40.50.1980 142 262 6.8E-36 T 09-03-2017 RG43_RS20720 f82fe69b6ddcc6d0d2ecb5596b859874 266 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 2 266 48.344 T 09-03-2017 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 RG43_RS20720 f82fe69b6ddcc6d0d2ecb5596b859874 266 Pfam PF01497 Periplasmic binding protein 26 217 3.2E-23 T 09-03-2017 IPR002491 ABC transporter periplasmic binding domain GO:0005488 RG43_RS20720 f82fe69b6ddcc6d0d2ecb5596b859874 266 SUPERFAMILY SSF53807 25 262 5.1E-57 T 09-03-2017 RG43_RS07160 7fe628df0bc0faf8d215dd33a2eac72b 258 Pfam PF14581 SseB protein C-terminal domain 137 243 1.7E-31 T 09-03-2017 IPR027945 SseB protein, C-terminal RG43_RS07160 7fe628df0bc0faf8d215dd33a2eac72b 258 Pfam PF07179 SseB protein N-terminal domain 8 119 5.9E-24 T 09-03-2017 IPR009839 SseB protein N-terminal domain RG43_RS10860 ccfb4a7497fbd98dafee3c38a9c78618 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 109 2.7E-34 T 09-03-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RG43_RS10860 ccfb4a7497fbd98dafee3c38a9c78618 222 Gene3D G3DSA:1.10.3720.10 12 216 2.5E-56 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS10860 ccfb4a7497fbd98dafee3c38a9c78618 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 214 2.8E-25 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS10860 ccfb4a7497fbd98dafee3c38a9c78618 222 SUPERFAMILY SSF161098 13 203 1.31E-52 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS19950 5a38e54295740e7a88998156022717e8 66 Gene3D G3DSA:1.10.260.40 13 65 1.9E-8 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS19950 5a38e54295740e7a88998156022717e8 66 Pfam PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 13 64 6.2E-10 T 09-03-2017 IPR031856 Putative bacterial antitoxin YdaS RG43_RS00930 61374125e3236f1025c16cc85379f696 145 Pfam PF05360 yiaA/B two helix domain 12 64 3.6E-21 T 09-03-2017 IPR008024 YiaAB two helix RG43_RS00930 61374125e3236f1025c16cc85379f696 145 Pfam PF05360 yiaA/B two helix domain 75 127 2.9E-19 T 09-03-2017 IPR008024 YiaAB two helix RG43_RS02190 ba5c462cef0b296fac2ec3a842557184 637 Pfam PF00005 ABC transporter 17 178 2.5E-22 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS02190 ba5c462cef0b296fac2ec3a842557184 637 Pfam PF00005 ABC transporter 328 459 2.5E-25 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS02190 ba5c462cef0b296fac2ec3a842557184 637 SMART SM00382 337 506 2.3E-14 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS02190 ba5c462cef0b296fac2ec3a842557184 637 SMART SM00382 26 223 2.4E-15 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS02190 ba5c462cef0b296fac2ec3a842557184 637 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS02190 ba5c462cef0b296fac2ec3a842557184 637 Pfam PF12848 ABC transporter 217 296 1.1E-28 T 09-03-2017 IPR032781 ABC-transporter extension domain RG43_RS02190 ba5c462cef0b296fac2ec3a842557184 637 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS02190 ba5c462cef0b296fac2ec3a842557184 637 SUPERFAMILY SSF52540 295 516 5.75E-46 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS02190 ba5c462cef0b296fac2ec3a842557184 637 Gene3D G3DSA:3.40.50.300 1 265 4.2E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS02190 ba5c462cef0b296fac2ec3a842557184 637 Gene3D G3DSA:3.40.50.300 310 538 7.6E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS02190 ba5c462cef0b296fac2ec3a842557184 637 SUPERFAMILY SSF52540 119 253 3.66E-46 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS02190 ba5c462cef0b296fac2ec3a842557184 637 SUPERFAMILY SSF52540 2 92 3.66E-46 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS07580 21d73ffb2a7c201c13065b332cfd83f3 433 SUPERFAMILY SSF56601 39 400 1.73E-77 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like RG43_RS07580 21d73ffb2a7c201c13065b332cfd83f3 433 Pfam PF00144 Beta-lactamase 43 412 5.7E-71 T 09-03-2017 IPR001466 Beta-lactamase-related RG43_RS07580 21d73ffb2a7c201c13065b332cfd83f3 433 Gene3D G3DSA:3.40.710.10 28 399 3.4E-89 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like RG43_RS07580 21d73ffb2a7c201c13065b332cfd83f3 433 Hamap MF_01034 UPF0214 protein YfeW [yfeW]. 1 432 83.224 T 09-03-2017 IPR022849 Peptidase S12, UPF0214, YfeW-type RG43_RS02685 649b2994d84f9c7db4a28d41d53263d6 80 Pfam PF06196 Protein of unknown function (DUF997) 7 77 3.2E-31 T 09-03-2017 IPR010398 Protein of unknown function DUF997 RG43_RS02685 649b2994d84f9c7db4a28d41d53263d6 80 ProDom PD745092 MEMBRANE YHDT SODIUM/PANTOTHENATE TRANSMEMBRANE INNER SYMPORTER Y0210 INTEGRAL PROTEIN-LIKE PM1090 1 80 2.0E-40 T 09-03-2017 IPR010398 Protein of unknown function DUF997 RG43_RS07865 b17f6b13bb8da9d4f7164ab48778c2a3 80 Pfam PF10810 Protein of unknown function (DUF2545) 1 80 1.0E-45 T 09-03-2017 IPR024470 Protein of unknown function DUF2545 RG43_RS07865 b17f6b13bb8da9d4f7164ab48778c2a3 80 ProDom PD857460 MEMBRANE YFDY INNER TRANSMEMBRANE STY2638 ECS3257 1 80 9.0E-39 T 09-03-2017 IPR024470 Protein of unknown function DUF2545 RG43_RS06370 4a70a70c7fd75c55a1af29243bd9692c 187 Pfam PF03608 PTS system enzyme II sorbitol-specific factor 5 171 2.8E-75 T 09-03-2017 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 RG43_RS06370 4a70a70c7fd75c55a1af29243bd9692c 187 PIRSF PIRSF038321 2 182 7.0E-88 T 09-03-2017 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 RG43_RS06370 4a70a70c7fd75c55a1af29243bd9692c 187 TIGRFAM TIGR00821 EII-GUT: PTS system, glucitol/sorbitol-specific, IIC component 1 181 1.2E-112 T 09-03-2017 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 RG43_RS01295 fad6c9023781ffa93b2a0bed02ec27d8 215 PRINTS PR01837 MgtC/SapB protein signature 65 87 5.8E-43 T 09-03-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 RG43_RS01295 fad6c9023781ffa93b2a0bed02ec27d8 215 PRINTS PR01837 MgtC/SapB protein signature 12 31 5.8E-43 T 09-03-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 RG43_RS01295 fad6c9023781ffa93b2a0bed02ec27d8 215 PRINTS PR01837 MgtC/SapB protein signature 31 49 5.8E-43 T 09-03-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 RG43_RS01295 fad6c9023781ffa93b2a0bed02ec27d8 215 PRINTS PR01837 MgtC/SapB protein signature 92 116 5.8E-43 T 09-03-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 RG43_RS01295 fad6c9023781ffa93b2a0bed02ec27d8 215 Pfam PF02308 MgtC family 9 136 1.3E-36 T 09-03-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 RG43_RS07355 bb329795a06092d7524eb26961f2fade 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 288 3.4E-127 T 09-03-2017 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RG43_RS07355 bb329795a06092d7524eb26961f2fade 292 SUPERFAMILY SSF51569 1 292 1.0E-99 T 09-03-2017 RG43_RS07355 bb329795a06092d7524eb26961f2fade 292 PIRSF PIRSF001365 1 292 1.7E-98 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 RG43_RS07355 bb329795a06092d7524eb26961f2fade 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 288 4.7E-126 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 RG43_RS07355 bb329795a06092d7524eb26961f2fade 292 Gene3D G3DSA:3.20.20.70 1 292 8.4E-118 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS07355 bb329795a06092d7524eb26961f2fade 292 SMART SM01130 1 290 1.4E-141 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 RG43_RS07355 bb329795a06092d7524eb26961f2fade 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 65.636 T 09-03-2017 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RG43_RS07355 bb329795a06092d7524eb26961f2fade 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 5.9E-35 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 RG43_RS07355 bb329795a06092d7524eb26961f2fade 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 5.9E-35 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 RG43_RS07355 bb329795a06092d7524eb26961f2fade 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 5.9E-35 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 RG43_RS07355 bb329795a06092d7524eb26961f2fade 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 5.9E-35 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 RG43_RS07355 bb329795a06092d7524eb26961f2fade 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 09-03-2017 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RG43_RS07355 bb329795a06092d7524eb26961f2fade 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 09-03-2017 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RG43_RS04955 f55bc2bc9f8f058c0173c42e4eeb3cfa 328 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 312 7.9E-84 T 09-03-2017 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 RG43_RS04955 f55bc2bc9f8f058c0173c42e4eeb3cfa 328 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 33 285 8.9E-86 T 09-03-2017 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 RG43_RS04955 f55bc2bc9f8f058c0173c42e4eeb3cfa 328 PIRSF PIRSF006470 1 328 4.0E-88 T 09-03-2017 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 RG43_RS10110 15970187ffce0cedd96098e776cdb3fe 546 TIGRFAM TIGR00797 matE: MATE efflux family protein 99 503 5.8E-70 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 RG43_RS10110 15970187ffce0cedd96098e776cdb3fe 546 Pfam PF01554 MatE 329 490 2.7E-20 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 RG43_RS10110 15970187ffce0cedd96098e776cdb3fe 546 Pfam PF01554 MatE 99 258 1.7E-36 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 RG43_RS11960 cf08c88908a64522fc8b4bde7b6462d5 252 Gene3D G3DSA:3.20.20.370 1 252 7.6E-79 T 09-03-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 RG43_RS11960 cf08c88908a64522fc8b4bde7b6462d5 252 SUPERFAMILY SSF88713 1 252 1.11E-71 T 09-03-2017 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RG43_RS11960 cf08c88908a64522fc8b4bde7b6462d5 252 Pfam PF04794 YdjC-like protein 5 240 1.0E-57 T 09-03-2017 IPR006879 Chitooligosaccharide deacetylase ChbG-like RG43_RS11960 cf08c88908a64522fc8b4bde7b6462d5 252 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 3 249 40.036 T 09-03-2017 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 RG43_RS07885 a1b3f0db2d213a76874f2397cd2e2bf2 416 Gene3D G3DSA:3.30.1540.10 246 326 2.4E-29 T 09-03-2017 RG43_RS07885 a1b3f0db2d213a76874f2397cd2e2bf2 416 Gene3D G3DSA:3.40.50.10540 2 216 1.7E-101 T 09-03-2017 IPR023606 CoA-transferase family III domain RG43_RS07885 a1b3f0db2d213a76874f2397cd2e2bf2 416 Gene3D G3DSA:3.40.50.10540 327 416 1.7E-101 T 09-03-2017 IPR023606 CoA-transferase family III domain RG43_RS07885 a1b3f0db2d213a76874f2397cd2e2bf2 416 Hamap MF_00742 Formyl-CoA:oxalate CoA-transferase [frc]. 1 416 65.257 T 09-03-2017 IPR017659 Formyl-CoA:oxalate CoA-transferase GO:0008152|GO:0033608 MetaCyc: PWY-6695 RG43_RS07885 a1b3f0db2d213a76874f2397cd2e2bf2 416 SUPERFAMILY SSF89796 1 416 2.09E-125 T 09-03-2017 IPR023606 CoA-transferase family III domain RG43_RS07885 a1b3f0db2d213a76874f2397cd2e2bf2 416 Pfam PF02515 CoA-transferase family III 5 393 4.1E-94 T 09-03-2017 IPR003673 CoA-transferase family III GO:0003824 RG43_RS07885 a1b3f0db2d213a76874f2397cd2e2bf2 416 TIGRFAM TIGR03253 oxalate_frc: formyl-CoA transferase 3 416 4.9E-237 T 09-03-2017 IPR017659 Formyl-CoA:oxalate CoA-transferase GO:0008152|GO:0033608 MetaCyc: PWY-6695 RG43_RS13140 bfbeb77b80b0541ad438801006afa8b7 71 Pfam PF10684 Putative biofilm-dependent modulation protein 1 71 2.7E-52 T 09-03-2017 IPR019625 Biofilm-dependent modulation protein Bdm, putative RG43_RS02535 96f545bd975c62f4f8fcabb13c8c5ec6 157 Hamap MF_00598 Protein Smg [smg]. 1 157 33.538 T 09-03-2017 IPR007456 Smg RG43_RS02535 96f545bd975c62f4f8fcabb13c8c5ec6 157 Pfam PF04361 Protein of unknown function (DUF494) 1 157 5.0E-59 T 09-03-2017 IPR007456 Smg RG43_RS11085 25af5e6af80022c8ab7cdac7121aa6fa 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 5.9E-57 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 RG43_RS11085 25af5e6af80022c8ab7cdac7121aa6fa 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 5.9E-57 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 RG43_RS11085 25af5e6af80022c8ab7cdac7121aa6fa 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 5.9E-57 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 RG43_RS11085 25af5e6af80022c8ab7cdac7121aa6fa 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 5.9E-57 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 RG43_RS11085 25af5e6af80022c8ab7cdac7121aa6fa 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 5.9E-57 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 RG43_RS11085 25af5e6af80022c8ab7cdac7121aa6fa 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 5.9E-57 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 RG43_RS11085 25af5e6af80022c8ab7cdac7121aa6fa 692 Pfam PF00771 FHIPEP family 31 680 1.9E-269 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 RG43_RS11085 25af5e6af80022c8ab7cdac7121aa6fa 692 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 09-03-2017 IPR025505 FHIPEP conserved site RG43_RS11085 25af5e6af80022c8ab7cdac7121aa6fa 692 PIRSF PIRSF005419 9 692 1.2E-243 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 RG43_RS11085 25af5e6af80022c8ab7cdac7121aa6fa 692 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 689 1.0E-285 T 09-03-2017 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 RG43_RS13760 8cde3b14c84f9a471f5be0e01f6f96d5 212 Pfam PF13460 NAD(P)H-binding 8 189 6.0E-51 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS13760 8cde3b14c84f9a471f5be0e01f6f96d5 212 SUPERFAMILY SSF51735 1 200 1.19E-32 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS13760 8cde3b14c84f9a471f5be0e01f6f96d5 212 Gene3D G3DSA:3.40.50.720 1 202 3.6E-39 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS11690 9ecc1d8c1c619afd50682cff8e257c4f 84 Pfam PF03891 Domain of unknown function (DUF333) 32 78 9.8E-19 T 09-03-2017 IPR005590 Protein of unknown function DUF333 RG43_RS07050 4005279cb9da37ce44f22096dcd804f4 290 Gene3D G3DSA:2.70.98.10 3 287 4.3E-18 T 09-03-2017 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 RG43_RS07050 4005279cb9da37ce44f22096dcd804f4 290 Pfam PF01263 Aldose 1-epimerase 3 285 2.2E-46 T 09-03-2017 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 RG43_RS07050 4005279cb9da37ce44f22096dcd804f4 290 SUPERFAMILY SSF74650 2 288 1.44E-47 T 09-03-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 RG43_RS18335 ec24f2a1f2db94406484922329881f67 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 09-03-2017 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 RG43_RS18335 ec24f2a1f2db94406484922329881f67 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 162 2.0E-48 T 09-03-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RG43_RS18335 ec24f2a1f2db94406484922329881f67 164 SUPERFAMILY SSF50891 1 162 4.09E-60 T 09-03-2017 IPR029000 Cyclophilin-like domain RG43_RS18335 ec24f2a1f2db94406484922329881f67 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 1.0E-11 T 09-03-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RG43_RS18335 ec24f2a1f2db94406484922329881f67 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 1.0E-11 T 09-03-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RG43_RS18335 ec24f2a1f2db94406484922329881f67 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 1.0E-11 T 09-03-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RG43_RS18335 ec24f2a1f2db94406484922329881f67 164 PIRSF PIRSF001467 1 164 5.1E-29 T 09-03-2017 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 RG43_RS18335 ec24f2a1f2db94406484922329881f67 164 Gene3D G3DSA:2.40.100.10 2 162 4.7E-56 T 09-03-2017 IPR029000 Cyclophilin-like domain RG43_RS12725 0783dcd9b1c91b4ab0e7db0355df4140 430 Hamap MF_01203 Voltage-gated ClC-type chloride channel ClcB [clcB]. 16 425 40.629 T 09-03-2017 IPR023790 Chloride channel, voltage-gated, ClcB GO:0006821|GO:0010447 RG43_RS12725 0783dcd9b1c91b4ab0e7db0355df4140 430 SUPERFAMILY SSF81340 4 426 7.72E-88 T 09-03-2017 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 RG43_RS12725 0783dcd9b1c91b4ab0e7db0355df4140 430 PRINTS PR00762 Chloride channel signature 115 134 4.2E-21 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 RG43_RS12725 0783dcd9b1c91b4ab0e7db0355df4140 430 PRINTS PR00762 Chloride channel signature 165 184 4.2E-21 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 RG43_RS12725 0783dcd9b1c91b4ab0e7db0355df4140 430 PRINTS PR00762 Chloride channel signature 364 380 4.2E-21 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 RG43_RS12725 0783dcd9b1c91b4ab0e7db0355df4140 430 PRINTS PR00762 Chloride channel signature 382 401 4.2E-21 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 RG43_RS12725 0783dcd9b1c91b4ab0e7db0355df4140 430 PRINTS PR00762 Chloride channel signature 329 349 4.2E-21 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 RG43_RS12725 0783dcd9b1c91b4ab0e7db0355df4140 430 Pfam PF00654 Voltage gated chloride channel 75 414 7.7E-76 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 RG43_RS12725 0783dcd9b1c91b4ab0e7db0355df4140 430 Gene3D G3DSA:1.10.3080.10 11 426 1.4E-73 T 09-03-2017 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 RG43_RS00055 7a258cc59a00973b60709ccb716c3177 74 Pfam PF03811 InsA N-terminal domain 1 19 4.2E-9 T 09-03-2017 IPR003220 InsA N-terminal domain GO:0006313 RG43_RS00055 7a258cc59a00973b60709ccb716c3177 74 Pfam PF12759 InsA C-terminal domain 26 71 2.8E-30 T 09-03-2017 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain RG43_RS21210 6fdd622f3ebb824153723a9288fb7c8e 536 SUPERFAMILY SSF161098 12 265 6.93E-43 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS21210 6fdd622f3ebb824153723a9288fb7c8e 536 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 266 2.3E-11 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS21210 6fdd622f3ebb824153723a9288fb7c8e 536 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 376 523 1.6E-7 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS21210 6fdd622f3ebb824153723a9288fb7c8e 536 Gene3D G3DSA:1.10.3720.10 292 532 2.5E-32 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS21210 6fdd622f3ebb824153723a9288fb7c8e 536 Gene3D G3DSA:1.10.3720.10 17 267 7.0E-36 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS21210 6fdd622f3ebb824153723a9288fb7c8e 536 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 8 525 1.7E-297 T 09-03-2017 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 RG43_RS21210 6fdd622f3ebb824153723a9288fb7c8e 536 SUPERFAMILY SSF161098 289 527 1.53E-34 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS25845 f3b16c26d8b8718a1f5f2fd3d3d5fb58 150 ProDom PD093913 YICN MEMBRANE INNER EXPORTED 1 145 5.0E-80 T 09-03-2017 IPR009587 Protein of unknown function DUF1198 RG43_RS25845 f3b16c26d8b8718a1f5f2fd3d3d5fb58 150 Pfam PF06711 Protein of unknown function (DUF1198) 1 142 4.2E-66 T 09-03-2017 IPR009587 Protein of unknown function DUF1198 RG43_RS18245 786ce970ec07505e5a5cd06091040928 110 Pfam PF11604 Copper binding periplasmic protein CusF 42 103 1.9E-21 T 09-03-2017 IPR021647 Copper binding periplasmic protein CusF RG43_RS22900 2570cb8316ae4b95c2b5d701a994e9e2 444 PIRSF PIRSF006060 2 441 5.2E-49 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RG43_RS22900 2570cb8316ae4b95c2b5d701a994e9e2 444 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 2 443 4.9E-147 T 09-03-2017 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 RG43_RS22900 2570cb8316ae4b95c2b5d701a994e9e2 444 Pfam PF13520 Amino acid permease 7 416 1.7E-37 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RG43_RS23560 c41b53a137caf36a5ed1dfeed2472f84 164 Pfam PF03830 PTS system sorbose subfamily IIB component 3 149 8.2E-52 T 09-03-2017 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 RG43_RS23560 c41b53a137caf36a5ed1dfeed2472f84 164 SUPERFAMILY SSF52728 1 159 1.83E-53 T 09-03-2017 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 RG43_RS23560 c41b53a137caf36a5ed1dfeed2472f84 164 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 2 151 7.5E-67 T 09-03-2017 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 RG43_RS23560 c41b53a137caf36a5ed1dfeed2472f84 164 Gene3D G3DSA:3.40.35.10 1 158 4.3E-60 T 09-03-2017 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 RG43_RS01200 0c458f9802790e9e5a1395443bf26bbf 255 Pfam PF00563 EAL domain 27 242 4.4E-29 T 09-03-2017 IPR001633 EAL domain RG43_RS01200 0c458f9802790e9e5a1395443bf26bbf 255 Gene3D G3DSA:3.20.20.450 33 250 4.1E-25 T 09-03-2017 IPR001633 EAL domain RG43_RS01200 0c458f9802790e9e5a1395443bf26bbf 255 SMART SM00052 7 247 2.5E-55 T 09-03-2017 IPR001633 EAL domain RG43_RS01200 0c458f9802790e9e5a1395443bf26bbf 255 SUPERFAMILY SSF141868 26 249 5.75E-30 T 09-03-2017 IPR001633 EAL domain RG43_RS14975 0111dc3b581da43d82e075f58bb8d9c2 179 Pfam PF05433 Glycine zipper 2TM domain 73 113 9.0E-12 T 09-03-2017 IPR008816 Glycine zipper 2TM domain GO:0019867 RG43_RS03375 0e90fa6b8af8649d9fc0bb3e6fcf9660 443 Pfam PF03222 Tryptophan/tyrosine permease family 29 438 3.1E-8 T 09-03-2017 IPR018227 Tryptophan/tyrosine permease GO:0003333 RG43_RS03375 0e90fa6b8af8649d9fc0bb3e6fcf9660 443 TIGRFAM TIGR00814 stp: serine transporter 17 433 1.0E-172 T 09-03-2017 IPR004694 Hydroxy amino acid transporter GO:0005215|GO:0006810|GO:0016021 RG43_RS03375 0e90fa6b8af8649d9fc0bb3e6fcf9660 443 Hamap MF_01583 Threonine/serine transporter TdcC [tdcC]. 1 443 55.797 T 09-03-2017 IPR023726 Threonine/serine transporter TdcC GO:0015565|GO:0015826|GO:0016021|GO:0022889|GO:0032329 RG43_RS20220 fa0f896e362c9ef30cf7ad593ee500f3 255 SUPERFAMILY SSF52540 4 231 3.84E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS20220 fa0f896e362c9ef30cf7ad593ee500f3 255 SMART SM00382 29 210 5.7E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS20220 fa0f896e362c9ef30cf7ad593ee500f3 255 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS20220 fa0f896e362c9ef30cf7ad593ee500f3 255 Pfam PF00005 ABC transporter 26 161 9.3E-27 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS20220 fa0f896e362c9ef30cf7ad593ee500f3 255 Gene3D G3DSA:3.40.50.300 5 239 1.3E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS20390 9216b174c4d4604d96f8f7982d511f44 64 Pfam PF06117 Enterobacterial protein of unknown function (DUF957) 14 62 1.6E-20 T 09-03-2017 IPR009301 Protein of unknown function DUF957 RG43_RS05735 fca219c54eeea72e240b5175187a2275 445 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 443 1.6E-123 T 09-03-2017 IPR010263 Type VI secretion protein, VC_A0114 RG43_RS05735 fca219c54eeea72e240b5175187a2275 445 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 18 442 1.1E-131 T 09-03-2017 IPR010263 Type VI secretion protein, VC_A0114 RG43_RS01300 1d8efbfd588c5ceeba4e6153b4835ad2 256 Pfam PF00005 ABC transporter 18 166 2.0E-27 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS01300 1d8efbfd588c5ceeba4e6153b4835ad2 256 SMART SM00382 26 215 4.3E-14 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS01300 1d8efbfd588c5ceeba4e6153b4835ad2 256 Gene3D G3DSA:3.40.50.300 3 232 3.0E-62 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS01300 1d8efbfd588c5ceeba4e6153b4835ad2 256 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS01300 1d8efbfd588c5ceeba4e6153b4835ad2 256 SUPERFAMILY SSF52540 2 229 1.7E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS11420 5bff90af6815e1bc33556196ce21148c 78 Pfam PF07351 Protein of unknown function (DUF1480) 2 77 1.4E-37 T 09-03-2017 IPR009950 Protein of unknown function DUF1480 RG43_RS11420 5bff90af6815e1bc33556196ce21148c 78 ProDom PD060427 YEBV CYTOPLASMIC Y1856 ESCHERICHIA ECS2546 YPO1694 COLI STY1982 SIMILAR 1 78 6.0E-41 T 09-03-2017 IPR009950 Protein of unknown function DUF1480 RG43_RS16675 609a06ed01466289e7bfc20a0a1fd990 332 SUPERFAMILY SSF111369 177 324 4.84E-13 T 09-03-2017 RG43_RS16675 609a06ed01466289e7bfc20a0a1fd990 332 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 43 319 4.4E-18 T 09-03-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RG43_RS16675 609a06ed01466289e7bfc20a0a1fd990 332 SUPERFAMILY SSF111369 113 170 1.96E-5 T 09-03-2017 RG43_RS16675 609a06ed01466289e7bfc20a0a1fd990 332 Gene3D G3DSA:2.40.50.100 44 77 2.7E-13 T 09-03-2017 RG43_RS16675 609a06ed01466289e7bfc20a0a1fd990 332 Gene3D G3DSA:2.40.50.100 204 235 2.7E-13 T 09-03-2017 RG43_RS16675 609a06ed01466289e7bfc20a0a1fd990 332 Hamap MF_01304 UPF0194 membrane protein YbhG [ybhG]. 2 328 50.673 T 09-03-2017 IPR022936 Uncharacterised protein family UPF0194, membrane protein YbhG RG43_RS16675 609a06ed01466289e7bfc20a0a1fd990 332 SUPERFAMILY SSF111369 42 99 8.89E-9 T 09-03-2017 RG43_RS01115 85f8a90cfb09b4bb49c86c4379467aad 80 Pfam PF13940 Toxin Ldr, type I toxin-antitoxin system 46 80 8.3E-26 T 09-03-2017 IPR025253 Type I toxin-antitoxin system, toxin Ldr RG43_RS02710 e12d0e3532f8ccafd73dabe178792f74 324 SUPERFAMILY SSF51735 115 286 1.31E-38 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS02710 e12d0e3532f8ccafd73dabe178792f74 324 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 2 323 1.4E-143 T 09-03-2017 IPR014188 Acrylyl-CoA reductase AcuI RG43_RS02710 e12d0e3532f8ccafd73dabe178792f74 324 Pfam PF00107 Zinc-binding dehydrogenase 158 282 6.1E-17 T 09-03-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RG43_RS02710 e12d0e3532f8ccafd73dabe178792f74 324 SMART SM00829 12 321 2.3E-4 T 09-03-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RG43_RS02710 e12d0e3532f8ccafd73dabe178792f74 324 SUPERFAMILY SSF50129 1 144 8.49E-47 T 09-03-2017 IPR011032 GroES-like RG43_RS02710 e12d0e3532f8ccafd73dabe178792f74 324 Gene3D G3DSA:3.90.180.10 1 85 1.1E-6 T 09-03-2017 IPR011032 GroES-like RG43_RS02710 e12d0e3532f8ccafd73dabe178792f74 324 Gene3D G3DSA:3.40.50.720 125 289 3.7E-80 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS02710 e12d0e3532f8ccafd73dabe178792f74 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 85 1.8E-4 T 09-03-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RG43_RS05450 ab75d44de281a5337b8383582c296639 765 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 159 700 1.5E-161 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RG43_RS05450 ab75d44de281a5337b8383582c296639 765 Gene3D G3DSA:3.30.365.10 128 180 7.9E-29 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RG43_RS05450 ab75d44de281a5337b8383582c296639 765 Gene3D G3DSA:3.30.365.10 289 363 7.9E-29 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RG43_RS05450 ab75d44de281a5337b8383582c296639 765 SUPERFAMILY SSF56003 143 757 1.18E-177 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RG43_RS05450 ab75d44de281a5337b8383582c296639 765 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 23 139 2.5E-35 T 09-03-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RG43_RS05450 ab75d44de281a5337b8383582c296639 765 SMART SM01008 23 139 2.0E-44 T 09-03-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RG43_RS05450 ab75d44de281a5337b8383582c296639 765 Gene3D G3DSA:3.30.365.10 181 287 4.6E-35 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RG43_RS05450 ab75d44de281a5337b8383582c296639 765 Gene3D G3DSA:3.30.365.10 365 451 1.2E-63 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RG43_RS05450 ab75d44de281a5337b8383582c296639 765 Gene3D G3DSA:3.30.365.10 616 757 1.2E-63 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RG43_RS05450 ab75d44de281a5337b8383582c296639 765 Gene3D G3DSA:3.30.365.10 452 606 2.4E-40 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RG43_RS05450 ab75d44de281a5337b8383582c296639 765 SUPERFAMILY SSF54665 5 158 2.22E-39 T 09-03-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RG43_RS05450 ab75d44de281a5337b8383582c296639 765 Gene3D G3DSA:3.90.1170.50 4 127 1.5E-39 T 09-03-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RG43_RS20420 9099753d5624616faa4dac531252c08d 155 SUPERFAMILY SSF53098 4 147 3.79E-59 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS20420 9099753d5624616faa4dac531252c08d 155 Gene3D G3DSA:3.30.420.10 3 148 2.3E-62 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS20420 9099753d5624616faa4dac531252c08d 155 Hamap MF_00042 Ribonuclease H [rnhA]. 2 149 40.223 T 09-03-2017 IPR022892 Ribonuclease H GO:0004523 RG43_RS20420 9099753d5624616faa4dac531252c08d 155 Pfam PF00075 RNase H 3 141 9.1E-55 T 09-03-2017 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 RG43_RS22835 14aed608b903e87469e861e7f4f44d91 97 SMART SM00883 2 95 4.3E-50 T 09-03-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RG43_RS22835 14aed608b903e87469e861e7f4f44d91 97 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 09-03-2017 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 RG43_RS22835 14aed608b903e87469e861e7f4f44d91 97 SUPERFAMILY SSF50129 1 96 1.29E-31 T 09-03-2017 IPR011032 GroES-like RG43_RS22835 14aed608b903e87469e861e7f4f44d91 97 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 24.098 T 09-03-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RG43_RS22835 14aed608b903e87469e861e7f4f44d91 97 Gene3D G3DSA:2.30.33.40 1 96 1.2E-32 T 09-03-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RG43_RS22835 14aed608b903e87469e861e7f4f44d91 97 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 3.8E-30 T 09-03-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RG43_RS22835 14aed608b903e87469e861e7f4f44d91 97 PRINTS PR00297 10kDa chaperonin signature 25 46 1.9E-27 T 09-03-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RG43_RS22835 14aed608b903e87469e861e7f4f44d91 97 PRINTS PR00297 10kDa chaperonin signature 3 18 1.9E-27 T 09-03-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RG43_RS22835 14aed608b903e87469e861e7f4f44d91 97 PRINTS PR00297 10kDa chaperonin signature 60 72 1.9E-27 T 09-03-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RG43_RS22835 14aed608b903e87469e861e7f4f44d91 97 PRINTS PR00297 10kDa chaperonin signature 82 95 1.9E-27 T 09-03-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RG43_RS06695 7d117a918d9a01b035f2f42832af8d14 121 Pfam PF10973 Protein of unknown function (DUF2799) 32 111 1.7E-16 T 09-03-2017 IPR021242 Protein of unknown function DUF2799 RG43_RS07790 46b03e93eba98dbcb2c9463dcc4d52a9 108 Pfam PF10697 Protein of unknown function (DUF2502) 23 106 2.1E-19 T 09-03-2017 IPR019638 Protein of unknown function DUF2502 RG43_RS17960 4dd5a755e2791c6c7a18454ca9bf5dd6 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 122 19.396 T 09-03-2017 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 RG43_RS17960 4dd5a755e2791c6c7a18454ca9bf5dd6 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 116 5.9E-24 T 09-03-2017 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 RG43_RS17960 4dd5a755e2791c6c7a18454ca9bf5dd6 127 TIGRFAM TIGR00494 crcB: protein CrcB 6 121 6.6E-45 T 09-03-2017 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 RG43_RS05440 3b142c530ad4943ec04b01e82dc291d2 159 Gene3D G3DSA:3.10.20.30 7 79 3.1E-24 T 09-03-2017 IPR012675 Beta-grasp domain RG43_RS05440 3b142c530ad4943ec04b01e82dc291d2 159 SUPERFAMILY SSF47741 89 155 1.3E-23 T 09-03-2017 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RG43_RS05440 3b142c530ad4943ec04b01e82dc291d2 159 Pfam PF01799 [2Fe-2S] binding domain 78 152 2.7E-24 T 09-03-2017 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RG43_RS05440 3b142c530ad4943ec04b01e82dc291d2 159 Gene3D G3DSA:1.10.150.120 80 155 5.8E-27 T 09-03-2017 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RG43_RS05440 3b142c530ad4943ec04b01e82dc291d2 159 SUPERFAMILY SSF54292 8 82 4.33E-19 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RG43_RS05440 3b142c530ad4943ec04b01e82dc291d2 159 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 12 64 4.0E-7 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RG43_RS17065 3e469a5cfca8a75d43c0726167a4c9f0 122 Pfam PF10800 Protein of unknown function (DUF2528) 16 119 1.0E-41 T 09-03-2017 IPR024252 Protein of unknown function DUF2528 RG43_RS17065 3e469a5cfca8a75d43c0726167a4c9f0 122 ProDom PD077587 EA10 BINDING SINGLE-STRANDED DNA GENE STRAND GP03 PROPHAGE-DERIVED SSB LAMBDA 1 122 8.0E-66 T 09-03-2017 IPR024252 Protein of unknown function DUF2528 RG43_RS01650 ae4852e74e0ff9f9e525468243dc365b 295 Gene3D G3DSA:1.10.3720.10 62 291 6.6E-54 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS01650 ae4852e74e0ff9f9e525468243dc365b 295 SUPERFAMILY SSF161098 56 282 2.49E-52 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS01650 ae4852e74e0ff9f9e525468243dc365b 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 293 4.8E-20 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS18750 ab46fdd7b2c9838dd2de6d259b2c37fa 590 SMART SM00382 361 547 7.5E-15 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS18750 ab46fdd7b2c9838dd2de6d259b2c37fa 590 Pfam PF00005 ABC transporter 352 500 6.8E-32 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS18750 ab46fdd7b2c9838dd2de6d259b2c37fa 590 SUPERFAMILY SSF52540 327 572 8.81E-84 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS18750 ab46fdd7b2c9838dd2de6d259b2c37fa 590 SUPERFAMILY SSF90123 7 327 1.44E-71 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RG43_RS18750 ab46fdd7b2c9838dd2de6d259b2c37fa 590 Gene3D G3DSA:1.20.1560.10 7 319 5.6E-71 T 09-03-2017 RG43_RS18750 ab46fdd7b2c9838dd2de6d259b2c37fa 590 Gene3D G3DSA:3.40.50.300 340 565 8.7E-73 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS18750 ab46fdd7b2c9838dd2de6d259b2c37fa 590 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS18750 ab46fdd7b2c9838dd2de6d259b2c37fa 590 Pfam PF00664 ABC transporter transmembrane region 22 291 1.7E-36 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RG43_RS03255 33d45b0fa875971253ba6f9d545821e2 263 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 4 263 2.1E-125 T 09-03-2017 IPR018405 Phosphotransferase system, mannose/fructose/sorbose family IID component, subgroup GO:0009401|GO:0016021 RG43_RS03255 33d45b0fa875971253ba6f9d545821e2 263 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 5 263 3.7E-90 T 09-03-2017 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 RG43_RS25525 89f4e395d961f21495741ae5f17800b1 257 SUPERFAMILY SSF52540 11 243 2.66E-61 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25525 89f4e395d961f21495741ae5f17800b1 257 SMART SM00382 35 237 1.0E-10 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS25525 89f4e395d961f21495741ae5f17800b1 257 Gene3D G3DSA:3.40.50.300 11 251 1.5E-71 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25525 89f4e395d961f21495741ae5f17800b1 257 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 11 257 1.6E-121 T 09-03-2017 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 RG43_RS25525 89f4e395d961f21495741ae5f17800b1 257 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS25525 89f4e395d961f21495741ae5f17800b1 257 Pfam PF00005 ABC transporter 26 181 1.4E-34 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS14220 f885ea296d2e097dd67fd4072d9370b9 682 TIGRFAM TIGR02675 tape_meas_nterm: tape measure domain 290 358 6.3E-15 T 09-03-2017 IPR013491 Caudovirus, tape measure, N-terminal RG43_RS16895 7283038d52e9d298169abc481bf8db73 192 PIRSF PIRSF004395 1 192 2.7E-97 T 09-03-2017 IPR010633 Bacteriophage lambda, GpZ, minor tail RG43_RS16895 7283038d52e9d298169abc481bf8db73 192 Pfam PF06763 Prophage minor tail protein Z (GPZ) 3 192 1.9E-78 T 09-03-2017 IPR010633 Bacteriophage lambda, GpZ, minor tail RG43_RS05370 c6c906e0909d680b1efc94d9b2b6c727 466 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 363 383 - T 09-03-2017 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 RG43_RS05370 c6c906e0909d680b1efc94d9b2b6c727 466 Pfam PF00860 Permease family 22 415 5.0E-109 T 09-03-2017 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RG43_RS05370 c6c906e0909d680b1efc94d9b2b6c727 466 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 18 445 4.9E-137 T 09-03-2017 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 RG43_RS09280 53e95263b326f2c4089b3782082ace46 180 SUPERFAMILY SSF49401 29 176 1.68E-10 T 09-03-2017 IPR008966 Adhesion domain RG43_RS09280 53e95263b326f2c4089b3782082ace46 180 Pfam PF00419 Fimbrial protein 32 177 3.1E-8 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS09280 53e95263b326f2c4089b3782082ace46 180 Gene3D G3DSA:2.60.40.1090 28 174 6.8E-10 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS22375 6368f0cdf1a01dc384e1c2397a7d71e6 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 63 5.0E-30 T 09-03-2017 IPR009491 Protein of unknown function DUF1107 RG43_RS22375 6368f0cdf1a01dc384e1c2397a7d71e6 68 Gene3D G3DSA:3.30.1910.10 1 65 5.0E-37 T 09-03-2017 RG43_RS22375 6368f0cdf1a01dc384e1c2397a7d71e6 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 1.1E-29 T 09-03-2017 IPR009491 Protein of unknown function DUF1107 RG43_RS15410 33ddad67eb91298cd65bde74be7d1547 184 Pfam PF02613 Nitrate reductase delta subunit 36 147 4.5E-15 T 09-03-2017 IPR020945 DMSO/Nitrate reductase chaperone RG43_RS15410 33ddad67eb91298cd65bde74be7d1547 184 PIRSF PIRSF004690 1 184 1.2E-58 T 09-03-2017 IPR026269 Tat proofreading chaperone DmsD-type RG43_RS15410 33ddad67eb91298cd65bde74be7d1547 184 SUPERFAMILY SSF89155 2 180 3.79E-45 T 09-03-2017 IPR020945 DMSO/Nitrate reductase chaperone RG43_RS15410 33ddad67eb91298cd65bde74be7d1547 184 Gene3D G3DSA:1.10.3480.10 1 181 9.9E-52 T 09-03-2017 IPR020945 DMSO/Nitrate reductase chaperone RG43_RS13050 a90b2b91108d85e6f3052c84dd758113 167 SUPERFAMILY SSF49401 27 167 7.46E-24 T 09-03-2017 IPR008966 Adhesion domain RG43_RS13050 a90b2b91108d85e6f3052c84dd758113 167 Gene3D G3DSA:2.60.40.1090 27 163 4.3E-23 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS02605 002850d3369e31af13a4369e8aa5d478 252 Pfam PF00005 ABC transporter 28 176 1.2E-37 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS02605 002850d3369e31af13a4369e8aa5d478 252 SMART SM00382 37 224 1.4E-17 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS02605 002850d3369e31af13a4369e8aa5d478 252 SUPERFAMILY SSF52540 12 246 1.77E-80 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS02605 002850d3369e31af13a4369e8aa5d478 252 PIRSF PIRSF039085 9 252 8.1E-108 T 09-03-2017 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 RG43_RS02605 002850d3369e31af13a4369e8aa5d478 252 Gene3D G3DSA:3.40.50.300 11 248 1.5E-84 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS02605 002850d3369e31af13a4369e8aa5d478 252 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS07435 585c743eab0b8111ad2ffa60405c76dc 191 Gene3D G3DSA:3.90.79.10 4 186 1.1E-58 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 RG43_RS07435 585c743eab0b8111ad2ffa60405c76dc 191 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 2 186 2.3E-80 T 09-03-2017 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 RG43_RS07435 585c743eab0b8111ad2ffa60405c76dc 191 Pfam PF00293 NUDIX domain 45 163 2.5E-9 T 09-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 RG43_RS07435 585c743eab0b8111ad2ffa60405c76dc 191 SUPERFAMILY SSF55811 11 188 4.06E-50 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 RG43_RS09760 036734c1ad6f95c2855c6cb504d97a26 356 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 9 355 55.2 T 09-03-2017 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 RG43_RS09760 036734c1ad6f95c2855c6cb504d97a26 356 Gene3D G3DSA:3.40.640.10 50 254 1.2E-72 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS09760 036734c1ad6f95c2855c6cb504d97a26 356 Pfam PF00155 Aminotransferase class I and II 45 351 4.7E-68 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RG43_RS09760 036734c1ad6f95c2855c6cb504d97a26 356 SUPERFAMILY SSF53383 8 352 3.09E-82 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS09760 036734c1ad6f95c2855c6cb504d97a26 356 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 11 352 2.1E-127 T 09-03-2017 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 RG43_RS09760 036734c1ad6f95c2855c6cb504d97a26 356 Gene3D G3DSA:3.90.1150.10 255 352 2.6E-26 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RG43_RS09760 036734c1ad6f95c2855c6cb504d97a26 356 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 211 220 - T 09-03-2017 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 RG43_RS08850 97c3950730c482500df03b8d263116d4 335 Pfam PF04245 37-kD nucleoid-associated bacterial protein 10 324 1.9E-99 T 09-03-2017 IPR007358 Nucleoid-associated protein NdpA GO:0009295 RG43_RS08850 97c3950730c482500df03b8d263116d4 335 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 330 47.377 T 09-03-2017 IPR007358 Nucleoid-associated protein NdpA GO:0009295 RG43_RS18095 467b19396b12d832a181ce678009b112 701 Pfam PF02554 Carbon starvation protein CstA 32 403 3.3E-168 T 09-03-2017 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 RG43_RS18095 467b19396b12d832a181ce678009b112 701 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 469 596 4.5E-35 T 09-03-2017 IPR025299 CstA, C-terminal domain RG43_RS15455 64208cd4b604d7ec938bc8f184375efc 375 SUPERFAMILY SSF49503 20 116 6.08E-6 T 09-03-2017 IPR008972 Cupredoxin RG43_RS15455 64208cd4b604d7ec938bc8f184375efc 375 Pfam PF13473 Cupredoxin-like domain 13 115 4.1E-25 T 09-03-2017 IPR028096 EfeO-type cupredoxin-like domain RG43_RS15455 64208cd4b604d7ec938bc8f184375efc 375 Pfam PF09375 Imelysin 135 368 4.8E-44 T 09-03-2017 RG43_RS15455 64208cd4b604d7ec938bc8f184375efc 375 Gene3D G3DSA:2.60.40.420 16 116 1.7E-6 T 09-03-2017 IPR008972 Cupredoxin RG43_RS02060 88f4bf9125025f38c07aa15d8bbac9ec 120 Gene3D G3DSA:1.10.1790.10 15 108 2.6E-6 T 09-03-2017 IPR011608 PRD domain GO:0006355 RG43_RS02060 88f4bf9125025f38c07aa15d8bbac9ec 120 SUPERFAMILY SSF63520 15 111 3.53E-6 T 09-03-2017 IPR011608 PRD domain GO:0006355 RG43_RS18290 3963c5d65125165b520818a2ffa7960e 218 Pfam PF08242 Methyltransferase domain 54 151 4.7E-7 T 09-03-2017 IPR013217 Methyltransferase type 12 RG43_RS18290 3963c5d65125165b520818a2ffa7960e 218 Gene3D G3DSA:3.40.50.150 50 176 3.9E-11 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS18290 3963c5d65125165b520818a2ffa7960e 218 PIRSF PIRSF011491 1 218 1.8E-99 T 09-03-2017 IPR016584 S-adenosyl-L-methionine dependent methyltransferase, YbcY, predicted RG43_RS18290 3963c5d65125165b520818a2ffa7960e 218 SUPERFAMILY SSF53335 7 193 6.76E-16 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS11430 8cbc949a190a847f5dff6e6d4f2c2669 877 Pfam PF02470 MlaD protein 394 455 8.5E-6 T 09-03-2017 IPR003399 Mce/MlaD RG43_RS11430 8cbc949a190a847f5dff6e6d4f2c2669 877 Pfam PF02470 MlaD protein 280 351 3.3E-8 T 09-03-2017 IPR003399 Mce/MlaD RG43_RS11430 8cbc949a190a847f5dff6e6d4f2c2669 877 Pfam PF02470 MlaD protein 747 810 3.0E-8 T 09-03-2017 IPR003399 Mce/MlaD RG43_RS11430 8cbc949a190a847f5dff6e6d4f2c2669 877 Pfam PF02470 MlaD protein 636 724 5.5E-10 T 09-03-2017 IPR003399 Mce/MlaD RG43_RS11430 8cbc949a190a847f5dff6e6d4f2c2669 877 Pfam PF02470 MlaD protein 46 137 9.5E-17 T 09-03-2017 IPR003399 Mce/MlaD RG43_RS11430 8cbc949a190a847f5dff6e6d4f2c2669 877 Pfam PF02470 MlaD protein 163 220 2.7E-6 T 09-03-2017 IPR003399 Mce/MlaD RG43_RS25505 10d11e3360af6bf2dd3f9433a6369d0c 356 Pfam PF00419 Fimbrial protein 204 354 3.7E-24 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS25505 10d11e3360af6bf2dd3f9433a6369d0c 356 SUPERFAMILY SSF49401 211 353 7.46E-16 T 09-03-2017 IPR008966 Adhesion domain RG43_RS25505 10d11e3360af6bf2dd3f9433a6369d0c 356 Gene3D G3DSA:2.60.40.1090 201 353 8.1E-10 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS26045 6e410b05ef91764e52dd9bcfa18c6c62 24 Pfam PF08048 Tap RepA1 leader peptide 1 24 1.2E-14 T 09-03-2017 IPR012605 RepA1 leader peptide Tap RG43_RS26045 6e410b05ef91764e52dd9bcfa18c6c62 24 TIGRFAM TIGR03475 tap_IncFII_lead: RepA leader peptide Tap 1 24 3.2E-17 T 09-03-2017 IPR012605 RepA1 leader peptide Tap RG43_RS01430 5c3e9984919757f7cc69deb288ba224a 144 Gene3D G3DSA:3.40.50.620 3 139 7.3E-32 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS01430 5c3e9984919757f7cc69deb288ba224a 144 PIRSF PIRSF006276 1 141 3.4E-54 T 09-03-2017 IPR006015 Universal stress protein A RG43_RS01430 5c3e9984919757f7cc69deb288ba224a 144 SUPERFAMILY SSF52402 3 139 1.59E-32 T 09-03-2017 RG43_RS01430 5c3e9984919757f7cc69deb288ba224a 144 Pfam PF00582 Universal stress protein family 3 138 2.4E-21 T 09-03-2017 IPR006016 UspA GO:0006950 RG43_RS14580 00399fa12727a8ad82a2e75316b5bcee 340 Gene3D G3DSA:3.40.50.1980 42 156 3.2E-12 T 09-03-2017 RG43_RS14580 00399fa12727a8ad82a2e75316b5bcee 340 Gene3D G3DSA:3.40.50.1980 157 297 5.7E-20 T 09-03-2017 RG43_RS14580 00399fa12727a8ad82a2e75316b5bcee 340 Pfam PF01497 Periplasmic binding protein 53 278 1.0E-18 T 09-03-2017 IPR002491 ABC transporter periplasmic binding domain GO:0005488 RG43_RS14580 00399fa12727a8ad82a2e75316b5bcee 340 SUPERFAMILY SSF53807 43 307 1.81E-36 T 09-03-2017 RG43_RS08080 04ad0f24b7b9b2d97608e432f28a4efb 188 Pfam PF00419 Fimbrial protein 33 187 7.0E-14 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS08080 04ad0f24b7b9b2d97608e432f28a4efb 188 SUPERFAMILY SSF49401 31 187 2.19E-27 T 09-03-2017 IPR008966 Adhesion domain RG43_RS08080 04ad0f24b7b9b2d97608e432f28a4efb 188 Gene3D G3DSA:2.60.40.1090 30 187 1.1E-32 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS24430 d6be5b9d828946445b940534c8ae9bc5 326 SUPERFAMILY SSF56349 60 314 2.94E-41 T 09-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RG43_RS24430 d6be5b9d828946445b940534c8ae9bc5 326 Pfam PF00589 Phage integrase family 164 307 1.7E-18 T 09-03-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RG43_RS24430 d6be5b9d828946445b940534c8ae9bc5 326 Gene3D G3DSA:1.10.443.10 161 316 9.2E-34 T 09-03-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RG43_RS03015 da252a2c9269b079bc15906d45923c9b 419 SUPERFAMILY SSF55205 1 418 4.25E-147 T 09-03-2017 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 RG43_RS03015 da252a2c9269b079bc15906d45923c9b 419 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 6 406 5.4E-131 T 09-03-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 RG43_RS03015 da252a2c9269b079bc15906d45923c9b 419 Gene3D G3DSA:3.65.10.10 220 416 3.8E-64 T 09-03-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 RG43_RS03015 da252a2c9269b079bc15906d45923c9b 419 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 415 1.1E-184 T 09-03-2017 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RG43_RS03015 da252a2c9269b079bc15906d45923c9b 419 Gene3D G3DSA:3.65.10.10 21 219 8.1E-68 T 09-03-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 RG43_RS03015 da252a2c9269b079bc15906d45923c9b 419 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 416 46.803 T 09-03-2017 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RG43_RS20990 82125508ae2a33b94aba52e7d68c6883 183 SMART SM00644 16 166 9.8E-62 T 09-03-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 RG43_RS20990 82125508ae2a33b94aba52e7d68c6883 183 Gene3D G3DSA:3.40.80.10 3 180 1.1E-71 T 09-03-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 RG43_RS20990 82125508ae2a33b94aba52e7d68c6883 183 SUPERFAMILY SSF55846 2 179 2.88E-69 T 09-03-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 RG43_RS20990 82125508ae2a33b94aba52e7d68c6883 183 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 30 167 2.7E-20 T 09-03-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 RG43_RS19660 6cfeb758a2d8685d750e1cac80c5ae05 204 Pfam PF07274 Protein of unknown function (DUF1440) 26 181 2.3E-54 T 09-03-2017 IPR009898 Protein of unknown function DUF1440 RG43_RS06630 3bac1bedfe1fa3f39f582def0ca2d035 292 Gene3D G3DSA:3.40.50.10330 1 149 2.1E-41 T 09-03-2017 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RG43_RS06630 3bac1bedfe1fa3f39f582def0ca2d035 292 Pfam PF01513 ATP-NAD kinase 8 271 9.0E-80 T 09-03-2017 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RG43_RS06630 3bac1bedfe1fa3f39f582def0ca2d035 292 Gene3D G3DSA:2.60.200.30 150 261 7.9E-42 T 09-03-2017 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RG43_RS06630 3bac1bedfe1fa3f39f582def0ca2d035 292 SUPERFAMILY SSF111331 7 289 4.84E-92 T 09-03-2017 IPR016064 NAD kinase/diacylglycerol kinase-like domain RG43_RS06630 3bac1bedfe1fa3f39f582def0ca2d035 292 Hamap MF_00361 NAD kinase [nadK]. 6 287 32.904 T 09-03-2017 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RG43_RS16005 f54b03733b9accf07b649354c09ff99e 60 Pfam PF03966 Trm112p-like protein 2 41 1.5E-8 T 09-03-2017 IPR005651 Uncharacterised protein family UPF0434/Trm112 RG43_RS16005 f54b03733b9accf07b649354c09ff99e 60 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 25.895 T 09-03-2017 IPR005651 Uncharacterised protein family UPF0434/Trm112 RG43_RS16005 f54b03733b9accf07b649354c09ff99e 60 Gene3D G3DSA:2.20.25.10 8 59 5.3E-24 T 09-03-2017 RG43_RS16005 f54b03733b9accf07b649354c09ff99e 60 SUPERFAMILY SSF158997 1 55 6.93E-20 T 09-03-2017 RG43_RS14450 124f1afd6acb02f0fe216a903ac14fea 238 SUPERFAMILY SSF110857 54 168 2.75E-10 T 09-03-2017 IPR013024 Butirosin biosynthesis, BtrG-like RG43_RS14450 124f1afd6acb02f0fe216a903ac14fea 238 Pfam PF04752 ChaC-like protein 54 222 6.7E-56 T 09-03-2017 IPR006840 ChaC-like protein Reactome: R-HSA-174403 RG43_RS14450 124f1afd6acb02f0fe216a903ac14fea 238 Gene3D G3DSA:3.10.490.10 48 216 8.6E-47 T 09-03-2017 IPR013024 Butirosin biosynthesis, BtrG-like RG43_RS10085 4b533bda03405edc0578f4f2ec347629 311 Gene3D G3DSA:2.40.440.10 91 232 1.9E-36 T 09-03-2017 RG43_RS10085 4b533bda03405edc0578f4f2ec347629 311 Pfam PF03734 L,D-transpeptidase catalytic domain 97 231 3.5E-20 T 09-03-2017 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 RG43_RS10085 4b533bda03405edc0578f4f2ec347629 311 SUPERFAMILY SSF141523 175 232 8.37E-29 T 09-03-2017 RG43_RS10085 4b533bda03405edc0578f4f2ec347629 311 SUPERFAMILY SSF141523 96 147 8.37E-29 T 09-03-2017 RG43_RS16470 c46426c216e7cf06b47dab106a168a78 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 304 4.7E-43 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS16470 c46426c216e7cf06b47dab106a168a78 306 SUPERFAMILY SSF161098 91 288 3.79E-22 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS16470 c46426c216e7cf06b47dab106a168a78 306 Gene3D G3DSA:1.10.3720.10 88 301 3.5E-21 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS10475 410ba409f16cce79c14dc5fe34346abe 123 Pfam PF06222 Phage tail assembly chaperone 1 123 6.8E-57 T 09-03-2017 IPR010411 Bacteriophage tail assembly protein, Gp13/14 RG43_RS11745 834628c6391cbb7c33fde8ac328b6104 248 Pfam PF06629 MltA-interacting protein MipA 28 248 3.5E-52 T 09-03-2017 IPR010583 MltA-interacting MipA RG43_RS02135 721cf4ff919f61e968ad9f82a2824f7a 55 Pfam PF10832 Protein of unknown function (DUF2559) 2 55 2.1E-31 T 09-03-2017 IPR022541 Protein of unknown function DUF2559 RG43_RS02135 721cf4ff919f61e968ad9f82a2824f7a 55 ProDom PD026929 YHFG 1 36 9.0E-14 T 09-03-2017 IPR022541 Protein of unknown function DUF2559 RG43_RS00220 565706e88d101670e4ea482bd653c89d 34 SUPERFAMILY SSF46689 1 33 1.18E-5 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS00220 565706e88d101670e4ea482bd653c89d 34 Pfam PF01527 Transposase 1 32 2.6E-10 T 09-03-2017 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RG43_RS00220 565706e88d101670e4ea482bd653c89d 34 Gene3D G3DSA:1.10.10.60 2 31 1.4E-7 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS16220 b4c041963caf853d63e34bf676550b93 552 Pfam PF11398 Protein of unknown function (DUF2813) 1 375 1.6E-155 T 09-03-2017 IPR022602 Protein of unknown function DUF2813 RG43_RS16220 b4c041963caf853d63e34bf676550b93 552 Gene3D G3DSA:3.40.50.300 1 129 1.8E-21 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16220 b4c041963caf853d63e34bf676550b93 552 Gene3D G3DSA:3.40.50.300 165 343 1.8E-21 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS16220 b4c041963caf853d63e34bf676550b93 552 SUPERFAMILY SSF52540 1 331 2.22E-16 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS25720 b9525af252a421a502950fcc8e0f55bb 110 Pfam PF07119 Protein of unknown function (DUF1375) 15 76 2.8E-12 T 09-03-2017 IPR010780 Protein of unknown function DUF1375 RG43_RS25455 9493d28b2334a35fbf3a5971f94c0d6b 177 Gene3D G3DSA:1.10.520.20 3 104 1.9E-35 T 09-03-2017 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210 RG43_RS25455 9493d28b2334a35fbf3a5971f94c0d6b 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 2.6E-67 T 09-03-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 RG43_RS25455 9493d28b2334a35fbf3a5971f94c0d6b 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 174 3.3E-50 T 09-03-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 RG43_RS25455 9493d28b2334a35fbf3a5971f94c0d6b 177 SUPERFAMILY SSF47928 3 102 1.14E-27 T 09-03-2017 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210 RG43_RS25455 9493d28b2334a35fbf3a5971f94c0d6b 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.255 T 09-03-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 RG43_RS25455 9493d28b2334a35fbf3a5971f94c0d6b 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 09-03-2017 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210 RG43_RS25455 9493d28b2334a35fbf3a5971f94c0d6b 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 1.1E-28 T 09-03-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 RG43_RS25455 9493d28b2334a35fbf3a5971f94c0d6b 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 1.1E-28 T 09-03-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 RG43_RS25455 9493d28b2334a35fbf3a5971f94c0d6b 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 1.1E-28 T 09-03-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 RG43_RS25455 9493d28b2334a35fbf3a5971f94c0d6b 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 1.1E-28 T 09-03-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 RG43_RS25455 9493d28b2334a35fbf3a5971f94c0d6b 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 1.1E-28 T 09-03-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 RG43_RS06070 6954e018d6e551572ec69d224a80893c 216 Pfam PF08798 CRISPR associated protein 1 212 1.2E-51 T 09-03-2017 IPR010179 CRISPR-associated protein Cse3 RG43_RS06070 6954e018d6e551572ec69d224a80893c 216 TIGRFAM TIGR01907 casE_Cse3: CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI 1 212 1.9E-86 T 09-03-2017 IPR010179 CRISPR-associated protein Cse3 RG43_RS06070 6954e018d6e551572ec69d224a80893c 216 Gene3D G3DSA:3.30.70.1200 1 70 1.5E-5 T 09-03-2017 RG43_RS06070 6954e018d6e551572ec69d224a80893c 216 SUPERFAMILY SSF117987 1 72 3.66E-10 T 09-03-2017 RG43_RS06070 6954e018d6e551572ec69d224a80893c 216 SUPERFAMILY SSF117987 82 212 1.12E-29 T 09-03-2017 RG43_RS06070 6954e018d6e551572ec69d224a80893c 216 SMART SM01101 1 212 3.5E-90 T 09-03-2017 IPR010179 CRISPR-associated protein Cse3 RG43_RS06070 6954e018d6e551572ec69d224a80893c 216 Gene3D G3DSA:3.30.70.1210 83 212 1.0E-33 T 09-03-2017 RG43_RS09870 a6f488e8d5e1788f9d33cbdccdd2e982 73 ProDom PD056719 YEET C0272 C4574 AEC74 ECS1404 C1284 INTERGENIC-REGION YKFH YPJJ 10 73 3.0E-33 T 09-03-2017 IPR009329 Protein of unknown function DUF987 RG43_RS09870 a6f488e8d5e1788f9d33cbdccdd2e982 73 Pfam PF06174 Protein of unknown function (DUF987) 1 65 2.5E-37 T 09-03-2017 IPR009329 Protein of unknown function DUF987 RG43_RS14460 f28379454b59978fb3a85a8cde4eb9a3 366 Pfam PF01699 Sodium/calcium exchanger protein 41 190 2.6E-14 T 09-03-2017 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 RG43_RS14460 f28379454b59978fb3a85a8cde4eb9a3 366 Pfam PF01699 Sodium/calcium exchanger protein 223 364 1.6E-9 T 09-03-2017 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 RG43_RS14460 f28379454b59978fb3a85a8cde4eb9a3 366 TIGRFAM TIGR00846 caca2: calcium/proton exchanger 1 365 8.0E-129 T 09-03-2017 IPR004713 Calcium/proton exchanger GO:0006812|GO:0008324|GO:0016021|GO:0055085 RG43_RS00960 40785a8282413070fe126dfd41e458ff 70 SMART SM00357 6 70 2.5E-31 T 09-03-2017 IPR011129 Cold shock protein GO:0003676 RG43_RS00960 40785a8282413070fe126dfd41e458ff 70 Gene3D G3DSA:2.40.50.140 5 68 3.2E-32 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS00960 40785a8282413070fe126dfd41e458ff 70 PIRSF PIRSF002599 1 70 1.1E-25 T 09-03-2017 IPR012156 Cold shock, CspA GO:0003676 RG43_RS00960 40785a8282413070fe126dfd41e458ff 70 PRINTS PR00050 Cold shock protein signature 7 22 5.8E-18 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RG43_RS00960 40785a8282413070fe126dfd41e458ff 70 PRINTS PR00050 Cold shock protein signature 28 37 5.8E-18 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RG43_RS00960 40785a8282413070fe126dfd41e458ff 70 PRINTS PR00050 Cold shock protein signature 43 61 5.8E-18 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RG43_RS00960 40785a8282413070fe126dfd41e458ff 70 SUPERFAMILY SSF50249 4 69 3.94E-26 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS00960 40785a8282413070fe126dfd41e458ff 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 8.6E-33 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RG43_RS00960 40785a8282413070fe126dfd41e458ff 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 09-03-2017 IPR019844 Cold-shock conserved site RG43_RS03245 7f0ba7e39ea56468ebd8591a746860b4 287 SUPERFAMILY SSF53790 12 232 1.2E-84 T 09-03-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 RG43_RS03245 7f0ba7e39ea56468ebd8591a746860b4 287 PIRSF PIRSF005917 1 287 1.0E-108 T 09-03-2017 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RG43_RS03245 7f0ba7e39ea56468ebd8591a746860b4 287 Gene3D G3DSA:3.40.1010.10 12 120 8.2E-17 T 09-03-2017 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 RG43_RS03245 7f0ba7e39ea56468ebd8591a746860b4 287 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 283 4.5E-117 T 09-03-2017 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RG43_RS03245 7f0ba7e39ea56468ebd8591a746860b4 287 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 14 213 2.2E-29 T 09-03-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 RG43_RS03245 7f0ba7e39ea56468ebd8591a746860b4 287 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.785 T 09-03-2017 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RG43_RS03245 7f0ba7e39ea56468ebd8591a746860b4 287 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 09-03-2017 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RG43_RS03245 7f0ba7e39ea56468ebd8591a746860b4 287 Gene3D G3DSA:3.30.950.10 121 236 4.7E-43 T 09-03-2017 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 RG43_RS08140 a1e44250c7a7ab26ff58725ad2ef8360 182 Pfam PF04315 Elongation factor P hydroxylase 13 175 7.5E-81 T 09-03-2017 IPR007411 Elongation factor P hydroxylase RG43_RS00265 9bb97df8ddadaf9a0a2abe567bad721b 274 SUPERFAMILY SSF53697 89 257 3.71E-32 T 09-03-2017 RG43_RS00265 9bb97df8ddadaf9a0a2abe567bad721b 274 SUPERFAMILY SSF46689 6 79 1.16E-19 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS00265 9bb97df8ddadaf9a0a2abe567bad721b 274 Pfam PF01380 SIS domain 121 248 7.9E-20 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 RG43_RS00265 9bb97df8ddadaf9a0a2abe567bad721b 274 Pfam PF01418 Helix-turn-helix domain, rpiR family 6 80 1.3E-19 T 09-03-2017 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 RG43_RS00265 9bb97df8ddadaf9a0a2abe567bad721b 274 Gene3D G3DSA:3.40.50.10490 92 255 1.0E-30 T 09-03-2017 RG43_RS00265 9bb97df8ddadaf9a0a2abe567bad721b 274 Gene3D G3DSA:1.10.10.10 2 80 2.3E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS06170 c6f9721981f8f349e93a7a220c3ab6f0 454 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 7 453 1.0E-103 T 09-03-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 RG43_RS06170 c6f9721981f8f349e93a7a220c3ab6f0 454 PIRSF PIRSF002746 1 454 3.0E-152 T 09-03-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 RG43_RS06170 c6f9721981f8f349e93a7a220c3ab6f0 454 Pfam PF02447 GntP family permease 5 453 8.6E-156 T 09-03-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 RG43_RS03465 06d0c04686cf093876a7be5f2128f8f0 122 Pfam PF06476 Protein of unknown function (DUF1090) 11 116 1.4E-36 T 09-03-2017 IPR009468 Protein of unknown function DUF1090 RG43_RS22110 b23b7610cdeb349742eaaae7165d87a2 290 Pfam PF13391 HNH endonuclease 182 236 5.0E-8 T 09-03-2017 IPR003615 HNH nuclease RG43_RS22110 b23b7610cdeb349742eaaae7165d87a2 290 PIRSF PIRSF030850 1 290 3.9E-146 T 09-03-2017 IPR011396 Uncharacterised conserved protein UCP030850 RG43_RS18080 b68e2a06a14808563b67b689d99b8570 386 Gene3D G3DSA:3.40.640.10 45 272 1.1E-71 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS18080 b68e2a06a14808563b67b689d99b8570 386 Gene3D G3DSA:3.90.1150.10 273 385 2.2E-23 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RG43_RS18080 b68e2a06a14808563b67b689d99b8570 386 SUPERFAMILY SSF53383 10 386 1.2E-99 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS18080 b68e2a06a14808563b67b689d99b8570 386 Pfam PF00155 Aminotransferase class I and II 32 383 7.8E-57 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RG43_RS24405 970201ff952d49563d50e4a48337ded2 74 Pfam PF10809 Protein of unknown function (DUF2732) 13 65 1.1E-17 T 09-03-2017 IPR020126 Protein of unknown function DUF2732 RG43_RS05675 479177f38eeff3c6d6e868b9bcf86bff 586 PIRSF PIRSF028304 1 585 2.4E-162 T 09-03-2017 IPR010272 Type VI secretion system, TssF-like RG43_RS05675 479177f38eeff3c6d6e868b9bcf86bff 586 Pfam PF05947 Type VI secretion system, ImpG, VasA, VC_A0110 7 583 1.3E-189 T 09-03-2017 IPR010272 Type VI secretion system, TssF-like RG43_RS05675 479177f38eeff3c6d6e868b9bcf86bff 586 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 6 583 8.8E-174 T 09-03-2017 IPR010272 Type VI secretion system, TssF-like RG43_RS15395 3cbfc0c9fbef801dfbd868b7db9901fa 138 Pfam PF10614 Type VIII secretion system (T8SS), CsgF protein 6 129 2.6E-35 T 09-03-2017 IPR018893 Type VIII secretion system, CsgF RG43_RS09305 ac99d9833bb152c7fa07e94122986ed5 274 Pfam PF03824 High-affinity nickel-transport protein 13 273 6.9E-66 T 09-03-2017 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 RG43_RS17050 655c10bbfbc7f429ce5515571db24fed 285 Gene3D G3DSA:3.40.50.1010 138 228 9.6E-27 T 09-03-2017 IPR029060 PIN domain-like RG43_RS17050 655c10bbfbc7f429ce5515571db24fed 285 Gene3D G3DSA:3.40.50.1010 1 82 9.6E-27 T 09-03-2017 IPR029060 PIN domain-like RG43_RS17050 655c10bbfbc7f429ce5515571db24fed 285 Pfam PF01936 NYN domain 158 208 1.3E-9 T 09-03-2017 IPR021139 NYN domain, limkain-b1-type RG43_RS18015 9632fb63650dca2a6b4c11c594d85428 183 TIGRFAM TIGR03124 citrate_citX: holo-ACP synthase CitX 13 175 2.7E-61 T 09-03-2017 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 RG43_RS18015 9632fb63650dca2a6b4c11c594d85428 183 Hamap MF_00398 Probable apo-citrate lyase phosphoribosyl-dephospho-CoA transferase [citX]. 4 181 35.998 T 09-03-2017 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 RG43_RS18015 9632fb63650dca2a6b4c11c594d85428 183 Pfam PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 13 176 3.4E-54 T 09-03-2017 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 RG43_RS17465 19886f5f54c324dfb279a18049eb3f42 244 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 1 240 43.763 T 09-03-2017 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF RG43_RS17465 19886f5f54c324dfb279a18049eb3f42 244 Pfam PF03746 LamB/YcsF family 3 235 1.9E-94 T 09-03-2017 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF RG43_RS17465 19886f5f54c324dfb279a18049eb3f42 244 SUPERFAMILY SSF88713 1 242 7.12E-93 T 09-03-2017 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RG43_RS19940 f49b50d0fee989e178c11ca8bf3496ae 278 Pfam PF10554 Ash protein family 117 210 8.9E-14 T 09-03-2017 IPR018880 Bacteriophage P4, Ash protein RG43_RS15040 74bbcbe581cb97be7c4b8372f8cb2301 340 Gene3D G3DSA:3.30.160.60 71 109 2.2E-23 T 09-03-2017 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 RG43_RS15040 74bbcbe581cb97be7c4b8372f8cb2301 340 Pfam PF02618 YceG-like family 43 328 7.4E-78 T 09-03-2017 IPR003770 Uncharacterised protein family UPF0755, YceG-like RG43_RS15040 74bbcbe581cb97be7c4b8372f8cb2301 340 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 1 337 4.3E-158 T 09-03-2017 IPR003770 Uncharacterised protein family UPF0755, YceG-like RG43_RS15040 74bbcbe581cb97be7c4b8372f8cb2301 340 Gene3D G3DSA:3.30.160.60 303 339 7.6E-18 T 09-03-2017 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 RG43_RS09155 d7f20e3d0e5258543ad888228e7ad6d9 765 Gene3D G3DSA:3.20.20.300 35 366 2.4E-103 T 09-03-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 RG43_RS09155 d7f20e3d0e5258543ad888228e7ad6d9 765 SMART SM01217 685 754 8.0E-32 T 09-03-2017 IPR026891 Fibronectin type III-like domain RG43_RS09155 d7f20e3d0e5258543ad888228e7ad6d9 765 Pfam PF14310 Fibronectin type III-like domain 686 754 3.1E-23 T 09-03-2017 IPR026891 Fibronectin type III-like domain RG43_RS09155 d7f20e3d0e5258543ad888228e7ad6d9 765 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 273 290 - T 09-03-2017 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 RG43_RS09155 d7f20e3d0e5258543ad888228e7ad6d9 765 SUPERFAMILY SSF51445 34 394 2.84E-98 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily RG43_RS09155 d7f20e3d0e5258543ad888228e7ad6d9 765 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 46 352 1.9E-100 T 09-03-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 RG43_RS09155 d7f20e3d0e5258543ad888228e7ad6d9 765 SUPERFAMILY SSF52279 395 464 2.75E-58 T 09-03-2017 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 RG43_RS09155 d7f20e3d0e5258543ad888228e7ad6d9 765 SUPERFAMILY SSF52279 495 651 2.75E-58 T 09-03-2017 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 RG43_RS09155 d7f20e3d0e5258543ad888228e7ad6d9 765 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 395 648 5.3E-61 T 09-03-2017 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 RG43_RS09155 d7f20e3d0e5258543ad888228e7ad6d9 765 Gene3D G3DSA:3.40.50.1700 383 651 2.2E-80 T 09-03-2017 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 RG43_RS09155 d7f20e3d0e5258543ad888228e7ad6d9 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 120 139 5.3E-22 T 09-03-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 RG43_RS09155 d7f20e3d0e5258543ad888228e7ad6d9 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 273 291 5.3E-22 T 09-03-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 RG43_RS09155 d7f20e3d0e5258543ad888228e7ad6d9 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 166 182 5.3E-22 T 09-03-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 RG43_RS09155 d7f20e3d0e5258543ad888228e7ad6d9 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 203 219 5.3E-22 T 09-03-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 RG43_RS09155 d7f20e3d0e5258543ad888228e7ad6d9 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 101 117 5.3E-22 T 09-03-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 RG43_RS04300 0d0359a38ffc9e54c5ace0d7999b0dcc 230 Gene3D G3DSA:3.40.50.300 8 221 5.6E-23 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS04300 0d0359a38ffc9e54c5ace0d7999b0dcc 230 SUPERFAMILY SSF52540 6 224 1.21E-12 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS26675 0d0359a38ffc9e54c5ace0d7999b0dcc 230 Gene3D G3DSA:3.40.50.300 8 221 5.6E-23 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS26675 0d0359a38ffc9e54c5ace0d7999b0dcc 230 SUPERFAMILY SSF52540 6 224 1.21E-12 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS17850 b745a8e7ae77740a703d094acebe7f8c 241 Pfam PF00005 ABC transporter 17 165 6.3E-34 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS17850 b745a8e7ae77740a703d094acebe7f8c 241 SMART SM00382 26 213 8.2E-13 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS17850 b745a8e7ae77740a703d094acebe7f8c 241 Gene3D G3DSA:3.40.50.300 1 236 6.8E-82 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS17850 b745a8e7ae77740a703d094acebe7f8c 241 SUPERFAMILY SSF52540 1 235 2.92E-77 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS17850 b745a8e7ae77740a703d094acebe7f8c 241 PIRSF PIRSF039085 1 241 4.2E-105 T 09-03-2017 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 RG43_RS17850 b745a8e7ae77740a703d094acebe7f8c 241 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS05395 dd4266a63028e61e4df78f0a80bd384f 192 SUPERFAMILY SSF53448 1 189 1.64E-24 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS05395 dd4266a63028e61e4df78f0a80bd384f 192 Pfam PF12804 MobA-like NTP transferase domain 6 144 3.4E-25 T 09-03-2017 IPR025877 MobA-like NTP transferase RG43_RS05395 dd4266a63028e61e4df78f0a80bd384f 192 TIGRFAM TIGR03310 matur_MocA_YgfJ: molybdenum cofactor cytidylyltransferase 5 184 1.2E-64 T 09-03-2017 IPR017696 Molybdenum cofactor cytidylyltransferase MetaCyc: PWY-6476 RG43_RS05395 dd4266a63028e61e4df78f0a80bd384f 192 Gene3D G3DSA:3.90.550.10 1 189 8.4E-30 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS09435 2a7a296687bb30a43a16c69021e7bb87 240 Gene3D G3DSA:3.40.50.2300 9 156 5.9E-39 T 09-03-2017 RG43_RS09435 2a7a296687bb30a43a16c69021e7bb87 240 Gene3D G3DSA:1.10.10.10 157 235 3.5E-29 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS09435 2a7a296687bb30a43a16c69021e7bb87 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 231 1.6E-23 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RG43_RS09435 2a7a296687bb30a43a16c69021e7bb87 240 SMART SM00862 156 232 2.2E-25 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RG43_RS09435 2a7a296687bb30a43a16c69021e7bb87 240 Pfam PF00072 Response regulator receiver domain 13 121 1.1E-24 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS09435 2a7a296687bb30a43a16c69021e7bb87 240 SUPERFAMILY SSF46894 142 234 3.97E-26 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RG43_RS09435 2a7a296687bb30a43a16c69021e7bb87 240 SMART SM00448 11 121 6.2E-39 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS09435 2a7a296687bb30a43a16c69021e7bb87 240 SUPERFAMILY SSF52172 6 138 9.96E-40 T 09-03-2017 IPR011006 CheY-like superfamily RG43_RS02765 da89535fcc37ea69c1a9f736e4b9291c 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.4E-19 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS02765 da89535fcc37ea69c1a9f736e4b9291c 309 SUPERFAMILY SSF46785 4 108 5.17E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS02765 da89535fcc37ea69c1a9f736e4b9291c 309 Gene3D G3DSA:3.40.190.10 174 259 4.3E-17 T 09-03-2017 RG43_RS02765 da89535fcc37ea69c1a9f736e4b9291c 309 SUPERFAMILY SSF53850 90 292 3.26E-39 T 09-03-2017 RG43_RS02765 da89535fcc37ea69c1a9f736e4b9291c 309 Pfam PF03466 LysR substrate binding domain 90 290 8.5E-39 T 09-03-2017 IPR005119 LysR, substrate-binding RG43_RS02765 da89535fcc37ea69c1a9f736e4b9291c 309 Gene3D G3DSA:3.40.190.10 92 173 1.4E-8 T 09-03-2017 RG43_RS02765 da89535fcc37ea69c1a9f736e4b9291c 309 Gene3D G3DSA:1.10.10.10 3 87 1.2E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS19525 550242b14b390b0dd3eb394079183032 475 Gene3D G3DSA:3.40.50.10420 189 295 2.8E-54 T 09-03-2017 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain RG43_RS19525 550242b14b390b0dd3eb394079183032 475 Gene3D G3DSA:3.40.50.10420 65 128 2.8E-54 T 09-03-2017 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain RG43_RS19525 550242b14b390b0dd3eb394079183032 475 Gene3D G3DSA:1.10.1060.10 306 398 1.1E-12 T 09-03-2017 RG43_RS19525 550242b14b390b0dd3eb394079183032 475 Pfam PF11870 Domain of unknown function (DUF3390) 385 468 2.0E-11 T 09-03-2017 IPR024569 4Fe-4S binding protein, C-terminal RG43_RS19525 550242b14b390b0dd3eb394079183032 475 SUPERFAMILY SSF46548 282 392 8.2E-19 T 09-03-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 RG43_RS19525 550242b14b390b0dd3eb394079183032 475 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 312 323 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS19525 550242b14b390b0dd3eb394079183032 475 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 72 294 2.8E-55 T 09-03-2017 IPR003741 LUD domain RG43_RS19525 550242b14b390b0dd3eb394079183032 475 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 362 373 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS19525 550242b14b390b0dd3eb394079183032 475 Pfam PF13183 4Fe-4S dicluster domain 309 376 5.5E-11 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS19525 550242b14b390b0dd3eb394079183032 475 SUPERFAMILY SSF100950 65 89 2.13E-40 T 09-03-2017 RG43_RS19525 550242b14b390b0dd3eb394079183032 475 SUPERFAMILY SSF100950 135 295 2.13E-40 T 09-03-2017 RG43_RS19525 550242b14b390b0dd3eb394079183032 475 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 18 453 7.6E-234 T 09-03-2017 IPR004452 4Fe-4S binding protein GO:0019516 RG43_RS07930 4d73c63caaaf3c1c494b40d310f6954a 72 Pfam PF02447 GntP family permease 2 71 2.6E-21 T 09-03-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 RG43_RS23395 e9429f233454d291fd3e8edab90f328e 80 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 2 64 8.2E-26 T 09-03-2017 IPR014318 Phage shock protein, PspG RG43_RS23395 e9429f233454d291fd3e8edab90f328e 80 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 1 62 4.4E-25 T 09-03-2017 IPR014318 Phage shock protein, PspG RG43_RS01365 cb1cb9f7d5fe73de4217f005e635c40f 333 Pfam PF03773 Predicted permease 10 330 2.3E-51 T 09-03-2017 IPR005524 Predicted permease DUF318 RG43_RS21105 59533713803097a5a1b087cae1d2da22 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 1.0E-5 T 09-03-2017 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 RG43_RS21105 59533713803097a5a1b087cae1d2da22 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 8.9E-163 T 09-03-2017 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 RG43_RS21105 59533713803097a5a1b087cae1d2da22 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 09-03-2017 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 RG43_RS21105 59533713803097a5a1b087cae1d2da22 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 09-03-2017 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 RG43_RS21105 59533713803097a5a1b087cae1d2da22 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.853 T 09-03-2017 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 RG43_RS21105 59533713803097a5a1b087cae1d2da22 360 Pfam PF00953 Glycosyl transferase family 4 99 284 1.1E-33 T 09-03-2017 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 RG43_RS19350 2e621beea4c51bc644b504f994153c83 91 Gene3D G3DSA:3.30.1660.10 22 89 1.8E-22 T 09-03-2017 IPR025543 Dodecin-like RG43_RS19350 2e621beea4c51bc644b504f994153c83 91 Pfam PF07338 Protein of unknown function (DUF1471) 37 89 4.5E-13 T 09-03-2017 IPR010854 Domain of unknown function DUF1471 RG43_RS19350 2e621beea4c51bc644b504f994153c83 91 SUPERFAMILY SSF159871 2 90 3.27E-21 T 09-03-2017 IPR010854 Domain of unknown function DUF1471 RG43_RS02550 e1afc16582bc386c497d34dd7232e4d5 272 Gene3D G3DSA:3.40.192.10 2 107 2.6E-38 T 09-03-2017 RG43_RS02550 e1afc16582bc386c497d34dd7232e4d5 272 SUPERFAMILY SSF51735 102 269 1.81E-47 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS02550 e1afc16582bc386c497d34dd7232e4d5 272 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 3 270 2.3E-111 T 09-03-2017 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 RG43_RS02550 e1afc16582bc386c497d34dd7232e4d5 272 SUPERFAMILY SSF53223 2 101 1.96E-32 T 09-03-2017 RG43_RS02550 e1afc16582bc386c497d34dd7232e4d5 272 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 121 190 1.6E-9 T 09-03-2017 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase RG43_RS02550 e1afc16582bc386c497d34dd7232e4d5 272 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 269 33.234 T 09-03-2017 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 RG43_RS02550 e1afc16582bc386c497d34dd7232e4d5 272 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 88 1.2E-23 T 09-03-2017 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 RG43_RS02550 e1afc16582bc386c497d34dd7232e4d5 272 Gene3D G3DSA:3.40.50.720 108 244 5.4E-51 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS08115 173e7a05f33e34e22f1201d66fde48fd 183 Pfam PF01713 Smr domain 98 172 1.0E-17 T 09-03-2017 IPR002625 Smr domain RG43_RS08115 173e7a05f33e34e22f1201d66fde48fd 183 SUPERFAMILY SSF160443 96 170 2.22E-9 T 09-03-2017 IPR002625 Smr domain RG43_RS08115 173e7a05f33e34e22f1201d66fde48fd 183 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 174 42.647 T 09-03-2017 IPR022990 Uncharacterised protein family UPF0115 RG43_RS08115 173e7a05f33e34e22f1201d66fde48fd 183 SMART SM00463 95 173 7.9E-23 T 09-03-2017 IPR002625 Smr domain RG43_RS04225 00b317da146d6f8b7b45c20f6a256154 346 Pfam PF00248 Aldo/keto reductase family 28 332 6.7E-80 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain RG43_RS04225 00b317da146d6f8b7b45c20f6a256154 346 Gene3D G3DSA:3.20.20.100 12 331 3.3E-88 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain RG43_RS04225 00b317da146d6f8b7b45c20f6a256154 346 SUPERFAMILY SSF51430 13 331 1.44E-88 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain RG43_RS26600 00b317da146d6f8b7b45c20f6a256154 346 Pfam PF00248 Aldo/keto reductase family 28 332 6.7E-80 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain RG43_RS26600 00b317da146d6f8b7b45c20f6a256154 346 Gene3D G3DSA:3.20.20.100 12 331 3.3E-88 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain RG43_RS26600 00b317da146d6f8b7b45c20f6a256154 346 SUPERFAMILY SSF51430 13 331 1.44E-88 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain RG43_RS22420 3d79c2f2aefa135722597f4d0d028ea6 220 Hamap MF_01606 Iron-sulfur cluster repair protein YtfE [ytfE]. 1 220 52.221 T 09-03-2017 IPR023742 Iron-sulfur cluster repair protein YftE GO:0006950|GO:0030091 RG43_RS22420 3d79c2f2aefa135722597f4d0d028ea6 220 TIGRFAM TIGR03652 FeS_repair_RIC: iron-sulfur cluster repair di-iron protein 8 216 8.5E-81 T 09-03-2017 IPR019903 Repair of iron centres family RG43_RS22420 3d79c2f2aefa135722597f4d0d028ea6 220 Pfam PF01814 Hemerythrin HHE cation binding domain 77 216 1.1E-27 T 09-03-2017 IPR012312 Haemerythrin-like Reactome: R-HSA-390471 RG43_RS22420 3d79c2f2aefa135722597f4d0d028ea6 220 Gene3D G3DSA:1.20.120.520 78 217 1.5E-26 T 09-03-2017 RG43_RS22420 3d79c2f2aefa135722597f4d0d028ea6 220 Pfam PF04405 Domain of Unknown function (DUF542) 5 58 1.3E-20 T 09-03-2017 IPR019903 Repair of iron centres family RG43_RS02005 a89e9b365f374a8861f99705b9e664dd 134 Pfam PF10748 Protein of unknown function (DUF2531) 3 134 2.8E-69 T 09-03-2017 IPR019684 Protein of unknown function DUF2531 RG43_RS15755 f09107d614d52a27be7968e821f557a9 396 Gene3D G3DSA:2.30.130.10 4 72 8.9E-28 T 09-03-2017 IPR015947 PUA-like domain RG43_RS15755 f09107d614d52a27be7968e821f557a9 396 SUPERFAMILY SSF88697 4 72 3.76E-17 T 09-03-2017 IPR015947 PUA-like domain RG43_RS15755 f09107d614d52a27be7968e821f557a9 396 Gene3D G3DSA:3.40.50.150 185 395 7.4E-62 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS15755 f09107d614d52a27be7968e821f557a9 396 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 114 371 4.7E-30 T 09-03-2017 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 RG43_RS15755 f09107d614d52a27be7968e821f557a9 396 SMART SM00359 3 88 4.2E-19 T 09-03-2017 IPR002478 PUA domain GO:0003723 RG43_RS15755 f09107d614d52a27be7968e821f557a9 396 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 396 70.783 T 09-03-2017 IPR023542 rRNA large subunit methyltransferase I GO:0008649 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RG43_RS15755 f09107d614d52a27be7968e821f557a9 396 Gene3D G3DSA:3.30.750.80 73 180 7.0E-35 T 09-03-2017 RG43_RS15755 f09107d614d52a27be7968e821f557a9 396 SUPERFAMILY SSF53335 79 392 1.94E-73 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS10955 96c5f61e193689d16bb38315cf420562 83 ProDom PD060536 YECJ YPO1738 1 77 1.0E-37 T 09-03-2017 IPR020262 Uncharacterised protein family YecJ RG43_RS10955 96c5f61e193689d16bb38315cf420562 83 Pfam PF10964 Protein of unknown function (DUF2766) 1 78 2.3E-48 T 09-03-2017 IPR020262 Uncharacterised protein family YecJ RG43_RS18940 ed1b89a738bb5f7ee793c8ae2e770053 294 SUPERFAMILY SSF111364 32 294 1.2E-89 T 09-03-2017 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 RG43_RS18940 ed1b89a738bb5f7ee793c8ae2e770053 294 Gene3D G3DSA:2.40.230.20 25 294 4.7E-106 T 09-03-2017 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 RG43_RS18940 ed1b89a738bb5f7ee793c8ae2e770053 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 89 110 2.7E-115 T 09-03-2017 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 RG43_RS18940 ed1b89a738bb5f7ee793c8ae2e770053 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 55 79 2.7E-115 T 09-03-2017 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 RG43_RS18940 ed1b89a738bb5f7ee793c8ae2e770053 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 270 293 2.7E-115 T 09-03-2017 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 RG43_RS18940 ed1b89a738bb5f7ee793c8ae2e770053 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 115 135 2.7E-115 T 09-03-2017 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 RG43_RS18940 ed1b89a738bb5f7ee793c8ae2e770053 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 240 259 2.7E-115 T 09-03-2017 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 RG43_RS18940 ed1b89a738bb5f7ee793c8ae2e770053 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 182 205 2.7E-115 T 09-03-2017 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 RG43_RS18940 ed1b89a738bb5f7ee793c8ae2e770053 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 28 50 2.7E-115 T 09-03-2017 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 RG43_RS18940 ed1b89a738bb5f7ee793c8ae2e770053 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 150 175 2.7E-115 T 09-03-2017 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 RG43_RS18940 ed1b89a738bb5f7ee793c8ae2e770053 294 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 32 294 3.1E-85 T 09-03-2017 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 RG43_RS23425 93f682dc56900629d70acf47473a6500 122 Pfam PF01219 Prokaryotic diacylglycerol kinase 16 117 1.2E-35 T 09-03-2017 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 RG43_RS23425 93f682dc56900629d70acf47473a6500 122 Gene3D G3DSA:1.10.3830.10 3 121 2.4E-46 T 09-03-2017 RG43_RS23425 93f682dc56900629d70acf47473a6500 122 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 70 81 - T 09-03-2017 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 RG43_RS11485 50742b438fde18c9298f5c246d366197 79 Pfam PF13996 YobH-like protein 2 71 2.4E-38 T 09-03-2017 IPR025611 YobH-like protein RG43_RS13985 d610fc02c58887890afc22550fe93371 375 SUPERFAMILY SSF69118 76 187 2.85E-9 T 09-03-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 RG43_RS13985 d610fc02c58887890afc22550fe93371 375 SUPERFAMILY SSF69118 256 373 1.73E-12 T 09-03-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 RG43_RS13985 d610fc02c58887890afc22550fe93371 375 Gene3D G3DSA:1.20.1290.10 266 374 2.7E-22 T 09-03-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 RG43_RS13985 d610fc02c58887890afc22550fe93371 375 Gene3D G3DSA:1.20.1290.10 80 191 7.5E-13 T 09-03-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 RG43_RS22220 67c013609529884f8a9dcde8b0ce00ba 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 66 1.0E-12 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RG43_RS22220 67c013609529884f8a9dcde8b0ce00ba 197 Gene3D G3DSA:1.10.357.10 81 194 5.7E-12 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RG43_RS22220 67c013609529884f8a9dcde8b0ce00ba 197 SUPERFAMILY SSF46689 9 89 5.49E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS22220 67c013609529884f8a9dcde8b0ce00ba 197 Gene3D G3DSA:1.10.10.60 9 72 5.9E-18 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS22220 67c013609529884f8a9dcde8b0ce00ba 197 ProSitePatterns PS01081 TetR-type HTH domain signature. 33 63 - T 09-03-2017 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RG43_RS22220 67c013609529884f8a9dcde8b0ce00ba 197 SUPERFAMILY SSF48498 89 190 1.19E-12 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RG43_RS19825 ca60a155a8878faf6fd1c4d26245efab 192 PIRSF PIRSF004395 1 192 1.8E-88 T 09-03-2017 IPR010633 Bacteriophage lambda, GpZ, minor tail RG43_RS19825 ca60a155a8878faf6fd1c4d26245efab 192 Pfam PF06763 Prophage minor tail protein Z (GPZ) 1 192 5.4E-74 T 09-03-2017 IPR010633 Bacteriophage lambda, GpZ, minor tail RG43_RS06110 2093671f94f6223b67ac99e85dc7abe3 103 Pfam PF04977 Septum formation initiator 11 89 3.0E-30 T 09-03-2017 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 RG43_RS06110 2093671f94f6223b67ac99e85dc7abe3 103 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 35.886 T 09-03-2017 IPR023081 Cell division protein FtsB RG43_RS10505 eff3d07ec9f05e40f1d73bd08e8ae6fa 213 Pfam PF06805 Bacteriophage lambda tail assembly protein I 14 97 2.2E-28 T 09-03-2017 IPR010654 Bacteriophage lambda tail assembly I RG43_RS13820 834037bc4bb28f06d64e668e530b390b 351 SUPERFAMILY SSF51735 5 158 6.12E-49 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS13820 834037bc4bb28f06d64e668e530b390b 351 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 10 128 2.9E-32 T 09-03-2017 IPR000683 Oxidoreductase, N-terminal GO:0016491 RG43_RS13820 834037bc4bb28f06d64e668e530b390b 351 Gene3D G3DSA:3.40.50.720 4 144 1.5E-48 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS13820 834037bc4bb28f06d64e668e530b390b 351 SUPERFAMILY SSF55347 138 283 3.6E-23 T 09-03-2017 RG43_RS13820 834037bc4bb28f06d64e668e530b390b 351 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 142 249 3.1E-14 T 09-03-2017 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 RG43_RS13820 834037bc4bb28f06d64e668e530b390b 351 Gene3D G3DSA:3.30.360.10 145 346 9.2E-47 T 09-03-2017 RG43_RS13615 74101bc33104b8f8cf019df3d9166aa5 61 ProDom PD052969 LIPOPROTEIN PRECURSOR SIGNAL YNBE MEMBRANE OUTER POSSIBLE SIMILAR ECS2004 SO2063 14 61 5.0E-21 T 09-03-2017 RG43_RS13615 74101bc33104b8f8cf019df3d9166aa5 61 Pfam PF13617 YnbE-like lipoprotein 5 59 7.8E-28 T 09-03-2017 IPR025985 YnbE-like lipoprotein RG43_RS07705 6b14ab860d8ddf34315411236b85ea28 418 Pfam PF03825 Nucleoside H+ symporter 1 407 2.2E-189 T 09-03-2017 RG43_RS07705 6b14ab860d8ddf34315411236b85ea28 418 TIGRFAM TIGR00889 2A0110: nucleoside transporter 1 418 2.9E-226 T 09-03-2017 IPR004740 Nucleoside:H+ symporter GO:0005337|GO:0015858|GO:0016021 RG43_RS07705 6b14ab860d8ddf34315411236b85ea28 418 SUPERFAMILY SSF103473 6 407 7.19E-34 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS07705 6b14ab860d8ddf34315411236b85ea28 418 Gene3D G3DSA:1.20.1250.20 7 187 6.1E-12 T 09-03-2017 RG43_RS07705 6b14ab860d8ddf34315411236b85ea28 418 Gene3D G3DSA:1.20.1250.20 206 408 1.3E-21 T 09-03-2017 RG43_RS14615 6db4c429334d29a36880e8cc9638e816 244 Hamap MF_01457 Flagellar brake protein YcgR [ycgR]. 3 239 29.512 T 09-03-2017 IPR023787 Type III secretion system flagellar brake protein YcgR GO:0035438|GO:0071945 RG43_RS14615 6db4c429334d29a36880e8cc9638e816 244 Gene3D G3DSA:2.30.110.10 11 102 5.2E-6 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 RG43_RS14615 6db4c429334d29a36880e8cc9638e816 244 Pfam PF07317 Flagellar regulator YcgR 8 109 2.2E-25 T 09-03-2017 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal RG43_RS14615 6db4c429334d29a36880e8cc9638e816 244 Gene3D G3DSA:2.40.10.220 113 242 2.5E-41 T 09-03-2017 RG43_RS14615 6db4c429334d29a36880e8cc9638e816 244 Pfam PF07238 PilZ domain 112 230 4.3E-12 T 09-03-2017 IPR009875 PilZ domain GO:0035438 RG43_RS15220 1f5c84bb2ff33a4b9d2a096ddb439246 138 SUPERFAMILY SSF140566 1 111 6.02E-16 T 09-03-2017 IPR007809 FlgN-like protein GO:0005515|GO:0044780 RG43_RS15220 1f5c84bb2ff33a4b9d2a096ddb439246 138 Gene3D G3DSA:1.20.58.300 1 112 1.5E-10 T 09-03-2017 IPR007809 FlgN-like protein GO:0005515|GO:0044780 RG43_RS15220 1f5c84bb2ff33a4b9d2a096ddb439246 138 Pfam PF05130 FlgN protein 1 128 5.5E-19 T 09-03-2017 IPR007809 FlgN-like protein GO:0005515|GO:0044780 RG43_RS07570 4dbb0d2f6c9ecfd49e35aac2be7889c3 191 Pfam PF06572 Protein of unknown function (DUF1131) 24 191 3.7E-82 T 09-03-2017 IPR010938 Protein of unknown function DUF1131 RG43_RS07570 4dbb0d2f6c9ecfd49e35aac2be7889c3 191 Gene3D G3DSA:2.60.460.10 26 191 2.1E-84 T 09-03-2017 RG43_RS07570 4dbb0d2f6c9ecfd49e35aac2be7889c3 191 ProDom PD105195 LIPOPROTEIN YFEY MEMBRANE OUTER PRECURSOR SIGNAL ESCHERICHIA ECS3303 EXPORTED Y1456 1 191 3.0E-110 T 09-03-2017 IPR010938 Protein of unknown function DUF1131 RG43_RS15795 4511ae98fa55b7554d0843068069afec 720 Pfam PF12805 FUSC-like inner membrane protein yccS 69 348 3.3E-112 T 09-03-2017 IPR032692 Integral membrane protein YccS, N-terminal RG43_RS15795 4511ae98fa55b7554d0843068069afec 720 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 11 708 0.0 T 09-03-2017 IPR010020 Integral membrane protein, YccS/YhfK RG43_RS15795 4511ae98fa55b7554d0843068069afec 720 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 11 709 0.0 T 09-03-2017 IPR010019 Integral membrane protein, YccS RG43_RS15795 4511ae98fa55b7554d0843068069afec 720 Pfam PF13515 Fusaric acid resistance protein-like 406 528 1.9E-25 T 09-03-2017 RG43_RS10385 adededa7337581bdb281daa5d69308b3 177 Gene3D G3DSA:1.10.530.40 29 174 1.3E-29 T 09-03-2017 IPR023347 Lysozyme domain GO:0003796 RG43_RS10385 adededa7337581bdb281daa5d69308b3 177 SUPERFAMILY SSF53955 7 172 4.19E-35 T 09-03-2017 IPR023346 Lysozyme-like domain RG43_RS10385 adededa7337581bdb281daa5d69308b3 177 Pfam PF00959 Phage lysozyme 48 166 2.3E-30 T 09-03-2017 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 RG43_RS15185 dec6b8c27a2267994f016bd7bd7238aa 251 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 170 247 1.9E-20 T 09-03-2017 IPR010930 Flagellar basal-body/hook protein, C-terminal domain RG43_RS15185 dec6b8c27a2267994f016bd7bd7238aa 251 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 09-03-2017 IPR019776 Flagellar basal body rod protein, conserved site RG43_RS15185 dec6b8c27a2267994f016bd7bd7238aa 251 Pfam PF00460 Flagella basal body rod protein 5 35 2.0E-10 T 09-03-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 RG43_RS15185 dec6b8c27a2267994f016bd7bd7238aa 251 SUPERFAMILY SSF117143 77 209 2.48E-16 T 09-03-2017 RG43_RS15185 dec6b8c27a2267994f016bd7bd7238aa 251 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 120 2.3E-32 T 09-03-2017 IPR020013 Fagellar hook-basal body protein, FlgE/F/G RG43_RS12105 1c724290a5d25581d769752dcdd74928 63 Gene3D G3DSA:2.10.70.10 23 63 2.1E-18 T 09-03-2017 RG43_RS12105 1c724290a5d25581d769752dcdd74928 63 Pfam PF10636 Hemin uptake protein hemP 27 63 7.5E-15 T 09-03-2017 IPR019600 Hemin uptake protein HemP RG43_RS19485 74ea856eed1015a3383ec98d50f96a4c 187 SUPERFAMILY SSF56349 4 178 4.71E-43 T 09-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RG43_RS19485 74ea856eed1015a3383ec98d50f96a4c 187 Pfam PF00589 Phage integrase family 4 175 1.2E-46 T 09-03-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RG43_RS19485 74ea856eed1015a3383ec98d50f96a4c 187 Gene3D G3DSA:1.10.443.10 4 173 7.0E-40 T 09-03-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RG43_RS14135 abf23eedd26e73bcd78794e7fdab54cc 293 SUPERFAMILY SSF89550 172 285 7.98E-52 T 09-03-2017 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 RG43_RS14135 abf23eedd26e73bcd78794e7fdab54cc 293 SUPERFAMILY SSF89550 9 90 7.98E-52 T 09-03-2017 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 RG43_RS14135 abf23eedd26e73bcd78794e7fdab54cc 293 Pfam PF02811 PHP domain 11 115 1.6E-6 T 09-03-2017 IPR004013 PHP domain GO:0003824 RG43_RS14135 abf23eedd26e73bcd78794e7fdab54cc 293 Gene3D G3DSA:3.20.20.140 164 268 1.8E-41 T 09-03-2017 RG43_RS14135 abf23eedd26e73bcd78794e7fdab54cc 293 Gene3D G3DSA:3.20.20.140 10 95 1.8E-41 T 09-03-2017 RG43_RS14135 abf23eedd26e73bcd78794e7fdab54cc 293 SMART SM00481 10 77 5.6E-19 T 09-03-2017 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 RG43_RS22480 bf68540371d2361ad34fedd11814f1c2 690 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 44 63 1.4E-8 T 09-03-2017 RG43_RS22480 bf68540371d2361ad34fedd11814f1c2 690 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 440 462 1.4E-8 T 09-03-2017 RG43_RS22480 bf68540371d2361ad34fedd11814f1c2 690 Pfam PF00890 FAD binding domain 43 475 2.0E-29 T 09-03-2017 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 RG43_RS22480 bf68540371d2361ad34fedd11814f1c2 690 SUPERFAMILY SSF51905 441 494 1.21E-30 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS22480 bf68540371d2361ad34fedd11814f1c2 690 SUPERFAMILY SSF51905 39 276 1.21E-30 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS22480 bf68540371d2361ad34fedd11814f1c2 690 Gene3D G3DSA:3.50.50.60 433 487 1.7E-36 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS22480 bf68540371d2361ad34fedd11814f1c2 690 Gene3D G3DSA:3.50.50.60 41 279 1.7E-36 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS07470 06ee2049e8fe89cf0954a640293fa532 159 Gene3D G3DSA:3.40.50.300 3 154 1.1E-14 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS07470 06ee2049e8fe89cf0954a640293fa532 159 Pfam PF10662 Ethanolamine utilisation - propanediol utilisation 1 143 5.6E-30 T 09-03-2017 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 RG43_RS07470 06ee2049e8fe89cf0954a640293fa532 159 SUPERFAMILY SSF52540 3 148 3.55E-18 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS07470 06ee2049e8fe89cf0954a640293fa532 159 TIGRFAM TIGR02528 EutP: ethanolamine utilization protein, EutP 2 144 7.4E-59 T 09-03-2017 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 RG43_RS07470 06ee2049e8fe89cf0954a640293fa532 159 PIRSF PIRSF036409 1 148 4.5E-59 T 09-03-2017 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 RG43_RS11320 761d1d05f18fac9c0e78208fd8a3f517 118 Hamap MF_01435 Protein YebF [yebF]. 1 118 37.737 T 09-03-2017 IPR020236 Uncharacterised protein family YebF RG43_RS11320 761d1d05f18fac9c0e78208fd8a3f517 118 Pfam PF13995 YebF-like protein 28 116 1.5E-40 T 09-03-2017 IPR025603 YebF/Colicin-M immunity protein RG43_RS11320 761d1d05f18fac9c0e78208fd8a3f517 118 ProDom PD077599 YEBF LIPOPROTEIN EXPORTED PERIPLASMIC PRECURSOR SIGNAL SIMILAR PALMITATE MEMBRANE ESCHERICHIA 20 118 3.0E-53 T 09-03-2017 IPR025603 YebF/Colicin-M immunity protein RG43_RS18905 21f16f854e3ba61149163dd69681337a 172 SUPERFAMILY SSF101307 15 162 4.71E-48 T 09-03-2017 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 RG43_RS18905 21f16f854e3ba61149163dd69681337a 172 PIRSF PIRSF006162 11 169 8.8E-58 T 09-03-2017 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668 RG43_RS18905 21f16f854e3ba61149163dd69681337a 172 Gene3D G3DSA:1.10.3760.10 77 156 1.7E-4 T 09-03-2017 IPR027416 YutG-like domain RG43_RS18905 21f16f854e3ba61149163dd69681337a 172 Pfam PF04608 Phosphatidylglycerophosphatase A 22 162 6.3E-51 T 09-03-2017 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 RG43_RS24130 68d36bdf68da9f1e979bef074c6ede8a 281 PRINTS PR00783 Major intrinsic protein family signature 234 254 6.5E-52 T 09-03-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 RG43_RS24130 68d36bdf68da9f1e979bef074c6ede8a 281 PRINTS PR00783 Major intrinsic protein family signature 9 28 6.5E-52 T 09-03-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 RG43_RS24130 68d36bdf68da9f1e979bef074c6ede8a 281 PRINTS PR00783 Major intrinsic protein family signature 48 72 6.5E-52 T 09-03-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 RG43_RS24130 68d36bdf68da9f1e979bef074c6ede8a 281 PRINTS PR00783 Major intrinsic protein family signature 184 206 6.5E-52 T 09-03-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 RG43_RS24130 68d36bdf68da9f1e979bef074c6ede8a 281 PRINTS PR00783 Major intrinsic protein family signature 151 169 6.5E-52 T 09-03-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 RG43_RS24130 68d36bdf68da9f1e979bef074c6ede8a 281 PRINTS PR00783 Major intrinsic protein family signature 85 104 6.5E-52 T 09-03-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 RG43_RS24130 68d36bdf68da9f1e979bef074c6ede8a 281 TIGRFAM TIGR00861 MIP: MIP family channel proteins 13 251 4.7E-76 T 09-03-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 RG43_RS24130 68d36bdf68da9f1e979bef074c6ede8a 281 ProSitePatterns PS00221 MIP family signature. 66 74 - T 09-03-2017 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 RG43_RS24130 68d36bdf68da9f1e979bef074c6ede8a 281 SUPERFAMILY SSF81338 9 257 1.7E-79 T 09-03-2017 IPR023271 Aquaporin-like Reactome: R-HSA-432047 RG43_RS24130 68d36bdf68da9f1e979bef074c6ede8a 281 Gene3D G3DSA:1.20.1080.10 4 258 1.9E-86 T 09-03-2017 IPR023271 Aquaporin-like Reactome: R-HSA-432047 RG43_RS24130 68d36bdf68da9f1e979bef074c6ede8a 281 Pfam PF00230 Major intrinsic protein 2 251 1.7E-77 T 09-03-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 RG43_RS09880 34f98f613292cb20cb5ff76026c7fb1f 159 ProDom PD012854 PLASMID KLCA ANTIRESTRICTION YFJX YCIB ARDB STABLE YFEB Z1216 C0275 62 159 5.0E-54 T 09-03-2017 IPR004914 Antirestriction protein RG43_RS09880 34f98f613292cb20cb5ff76026c7fb1f 159 Pfam PF03230 Antirestriction protein 64 159 1.5E-36 T 09-03-2017 IPR004914 Antirestriction protein RG43_RS16960 b54e49d3d975dcbf7450b1562693dba7 165 SUPERFAMILY SSF53955 17 163 6.65E-56 T 09-03-2017 IPR023346 Lysozyme-like domain RG43_RS16960 b54e49d3d975dcbf7450b1562693dba7 165 Gene3D G3DSA:1.10.530.40 34 163 3.3E-56 T 09-03-2017 IPR023347 Lysozyme domain GO:0003796 RG43_RS16960 b54e49d3d975dcbf7450b1562693dba7 165 Pfam PF00959 Phage lysozyme 48 154 1.9E-32 T 09-03-2017 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 RG43_RS00140 b9bed44f18a80189fdf7142173ef5411 115 Pfam PF05717 IS66 Orf2 like protein 9 106 3.7E-40 T 09-03-2017 IPR008878 Transposase IS66, Orf2 RG43_RS11390 babc004982c44c8bf4723ecac9737058 290 Pfam PF05425 Copper resistance protein D 185 284 4.8E-24 T 09-03-2017 IPR008457 Copper resistance protein D GO:0016021 RG43_RS05890 0a57d2f17cdb9721da5fddfc10686102 260 Pfam PF00849 RNA pseudouridylate synthase 11 170 1.4E-28 T 09-03-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RG43_RS05890 0a57d2f17cdb9721da5fddfc10686102 260 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 09-03-2017 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 RG43_RS05890 0a57d2f17cdb9721da5fddfc10686102 260 SUPERFAMILY SSF55120 2 238 2.4E-61 T 09-03-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RG43_RS02315 3a5a71ab9ab4c94a6ac68af2620a350b 169 PRINTS PR00885 Bacterial general secretion pathway protein H signature 122 137 1.6E-20 T 09-03-2017 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 RG43_RS02315 3a5a71ab9ab4c94a6ac68af2620a350b 169 PRINTS PR00885 Bacterial general secretion pathway protein H signature 17 31 1.6E-20 T 09-03-2017 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 RG43_RS02315 3a5a71ab9ab4c94a6ac68af2620a350b 169 PRINTS PR00885 Bacterial general secretion pathway protein H signature 2 16 1.6E-20 T 09-03-2017 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 RG43_RS02315 3a5a71ab9ab4c94a6ac68af2620a350b 169 SUPERFAMILY SSF54523 7 107 1.02E-12 T 09-03-2017 RG43_RS02315 3a5a71ab9ab4c94a6ac68af2620a350b 169 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 4.8E-8 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS02315 3a5a71ab9ab4c94a6ac68af2620a350b 169 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS02315 3a5a71ab9ab4c94a6ac68af2620a350b 169 Gene3D G3DSA:3.55.40.10 119 160 1.9E-4 T 09-03-2017 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 RG43_RS02315 3a5a71ab9ab4c94a6ac68af2620a350b 169 Gene3D G3DSA:3.55.40.10 40 112 1.3E-9 T 09-03-2017 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 RG43_RS02315 3a5a71ab9ab4c94a6ac68af2620a350b 169 Pfam PF12019 Type II transport protein GspH 44 143 9.5E-9 T 09-03-2017 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 RG43_RS02315 3a5a71ab9ab4c94a6ac68af2620a350b 169 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 3 142 1.4E-18 T 09-03-2017 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 RG43_RS02315 3a5a71ab9ab4c94a6ac68af2620a350b 169 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 1 26 1.1E-7 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site RG43_RS01555 59bd4b8e4256631c60e71483c5260250 119 Pfam PF10694 Protein of unknown function (DUF2500) 5 115 1.5E-31 T 09-03-2017 IPR019635 Protein of unknown function DUF2500 RG43_RS00850 08e3e4efc07c62c5ce6f80dcb8837102 425 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 418 9.2E-158 T 09-03-2017 IPR004681 TRAP transporter permease protein GO:0016021 RG43_RS00850 08e3e4efc07c62c5ce6f80dcb8837102 425 PIRSF PIRSF006066 1 425 9.2E-140 T 09-03-2017 IPR004681 TRAP transporter permease protein GO:0016021 RG43_RS00850 08e3e4efc07c62c5ce6f80dcb8837102 425 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 415 5.7E-128 T 09-03-2017 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RG43_RS09570 163365777ce7e9e4841cc841651f79f6 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 125 157 5.5E-7 T 09-03-2017 IPR001451 Hexapeptide repeat RG43_RS09570 163365777ce7e9e4841cc841651f79f6 182 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 133 161 - T 09-03-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 RG43_RS09570 163365777ce7e9e4841cc841651f79f6 182 SUPERFAMILY SSF51161 21 177 4.44E-38 T 09-03-2017 IPR011004 Trimeric LpxA-like RG43_RS09570 163365777ce7e9e4841cc841651f79f6 182 TIGRFAM TIGR04008 WcaF: colanic acid biosynthesis acetyltransferase WcaF 1 180 5.4E-121 T 09-03-2017 IPR024005 Colanic acid biosynthesis, acetyltransferase, WcaF RG43_RS09570 163365777ce7e9e4841cc841651f79f6 182 Gene3D G3DSA:2.160.10.10 21 180 1.9E-40 T 09-03-2017 RG43_RS18700 8c0fc28afdc8cc4f0ff842ba48eac564 156 Pfam PF10777 Inner membrane protein YlaC 1 152 8.8E-67 T 09-03-2017 IPR019713 Inner membrane protein YlaC RG43_RS03215 8125f8aec62694d2ccb1f501df2925f0 211 SMART SM00859 3 103 0.0058 T 09-03-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RG43_RS03215 8125f8aec62694d2ccb1f501df2925f0 211 Gene3D G3DSA:3.40.50.720 2 209 3.7E-45 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS03215 8125f8aec62694d2ccb1f501df2925f0 211 Pfam PF13460 NAD(P)H-binding 8 190 3.4E-10 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS03215 8125f8aec62694d2ccb1f501df2925f0 211 SUPERFAMILY SSF51735 2 200 2.91E-41 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS20055 ef04b3e991f9708024fe67ba1f39054d 150 Gene3D G3DSA:3.40.630.30 1 147 4.6E-37 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS20055 ef04b3e991f9708024fe67ba1f39054d 150 Pfam PF13673 Acetyltransferase (GNAT) domain 31 141 1.1E-19 T 09-03-2017 IPR000182 GNAT domain GO:0008080 RG43_RS20055 ef04b3e991f9708024fe67ba1f39054d 150 SUPERFAMILY SSF55729 1 146 1.03E-28 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS09990 a0464c2b27a5ad5457efc98d80e535e1 133 Pfam PF11682 Probable zinc-ribbon 4 122 5.0E-19 T 09-03-2017 IPR021696 Protein of unknown function DUF3279 RG43_RS07330 bfdb3151d7ab4f3cb7ef10fee8a6e107 119 Gene3D G3DSA:3.40.30.10 4 118 1.2E-48 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS07330 bfdb3151d7ab4f3cb7ef10fee8a6e107 119 SUPERFAMILY SSF52833 5 118 3.46E-35 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS07330 bfdb3151d7ab4f3cb7ef10fee8a6e107 119 Pfam PF03960 ArsC family 8 117 1.6E-22 T 09-03-2017 IPR006660 Arsenate reductase-like RG43_RS07330 bfdb3151d7ab4f3cb7ef10fee8a6e107 119 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 5 117 1.1E-48 T 09-03-2017 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 RG43_RS25585 0082f3f9576cd9ab072197c3f085f5ad 253 Gene3D G3DSA:3.90.470.20 36 111 7.2E-8 T 09-03-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 RG43_RS11070 7f7891fb153df08acad806a312d82fce 129 Pfam PF00072 Response regulator receiver domain 9 120 3.7E-32 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS11070 7f7891fb153df08acad806a312d82fce 129 Gene3D G3DSA:3.40.50.2300 4 126 3.6E-38 T 09-03-2017 RG43_RS11070 7f7891fb153df08acad806a312d82fce 129 SMART SM00448 6 120 1.0E-34 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RG43_RS11070 7f7891fb153df08acad806a312d82fce 129 SUPERFAMILY SSF52172 5 125 2.28E-35 T 09-03-2017 IPR011006 CheY-like superfamily RG43_RS08045 9ab96bc127def8e4c7d2adb170a065b9 251 PRINTS PR01805 VacJ lipoprotein signature 30 43 4.9E-35 T 09-03-2017 IPR007428 MlaA lipoprotein GO:0016020 RG43_RS08045 9ab96bc127def8e4c7d2adb170a065b9 251 PRINTS PR01805 VacJ lipoprotein signature 48 64 4.9E-35 T 09-03-2017 IPR007428 MlaA lipoprotein GO:0016020 RG43_RS08045 9ab96bc127def8e4c7d2adb170a065b9 251 PRINTS PR01805 VacJ lipoprotein signature 138 155 4.9E-35 T 09-03-2017 IPR007428 MlaA lipoprotein GO:0016020 RG43_RS08045 9ab96bc127def8e4c7d2adb170a065b9 251 PRINTS PR01805 VacJ lipoprotein signature 99 116 4.9E-35 T 09-03-2017 IPR007428 MlaA lipoprotein GO:0016020 RG43_RS08045 9ab96bc127def8e4c7d2adb170a065b9 251 Pfam PF04333 MlaA lipoprotein 29 222 1.4E-66 T 09-03-2017 IPR007428 MlaA lipoprotein GO:0016020 RG43_RS08795 d307ccb7224a87bc3686037bd68ee470 69 Pfam PF04995 Heme exporter protein D (CcmD) 15 58 8.8E-17 T 09-03-2017 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 RG43_RS08795 d307ccb7224a87bc3686037bd68ee470 69 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 12 58 2.2E-19 T 09-03-2017 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 RG43_RS09310 9349b0c023e13e5b28da19a2c598a33c 90 Pfam PF02583 Metal-sensitive transcriptional repressor 7 86 1.3E-19 T 09-03-2017 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 RG43_RS01980 64067a994cc33e4e4d907677b9039ece 186 SUPERFAMILY SSF55811 3 182 4.2E-38 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 RG43_RS01980 64067a994cc33e4e4d907677b9039ece 186 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 09-03-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RG43_RS01980 64067a994cc33e4e4d907677b9039ece 186 Pfam PF00293 NUDIX domain 46 150 8.1E-13 T 09-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 RG43_RS01980 64067a994cc33e4e4d907677b9039ece 186 Gene3D G3DSA:3.90.79.10 9 183 1.9E-42 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 RG43_RS08360 f71f2fb7813aea0d11f312f70d3c5464 166 Gene3D G3DSA:3.40.30.10 86 164 6.0E-11 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS08360 f71f2fb7813aea0d11f312f70d3c5464 166 PIRSF PIRSF000216 1 166 6.5E-54 T 09-03-2017 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08360 f71f2fb7813aea0d11f312f70d3c5464 166 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 123 141 - T 09-03-2017 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08360 f71f2fb7813aea0d11f312f70d3c5464 166 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 22 166 7.2E-53 T 09-03-2017 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS08360 f71f2fb7813aea0d11f312f70d3c5464 166 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 23 166 3.8E-51 T 09-03-2017 RG43_RS08360 f71f2fb7813aea0d11f312f70d3c5464 166 SUPERFAMILY SSF52833 15 165 3.91E-51 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS06375 35aba7bb0c720b2d727bc9b18c712ebb 361 SUPERFAMILY SSF53955 46 356 5.06E-103 T 09-03-2017 IPR023346 Lysozyme-like domain RG43_RS06375 35aba7bb0c720b2d727bc9b18c712ebb 361 Gene3D G3DSA:1.10.530.10 247 356 1.1E-58 T 09-03-2017 RG43_RS06375 35aba7bb0c720b2d727bc9b18c712ebb 361 Gene3D G3DSA:1.10.530.10 113 166 1.1E-58 T 09-03-2017 RG43_RS06375 35aba7bb0c720b2d727bc9b18c712ebb 361 Pfam PF13406 Transglycosylase SLT domain 57 353 3.0E-92 T 09-03-2017 IPR031304 Transglycosylase SLT domain 2 RG43_RS06375 35aba7bb0c720b2d727bc9b18c712ebb 361 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 61 355 1.1E-130 T 09-03-2017 IPR011757 Lytic transglycosylase MltB RG43_RS23090 0a8003be982b5daafde6ae4534aba9e3 354 PIRSF PIRSF007313 1 354 4.1E-158 T 09-03-2017 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 RG43_RS23090 0a8003be982b5daafde6ae4534aba9e3 354 Pfam PF05861 Bacterial phosphonate metabolism protein (PhnI) 1 350 3.2E-154 T 09-03-2017 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 RG43_RS22595 61fc2f0a513bcfb8aab92d75a6e79b95 212 Pfam PF06693 Protein of unknown function (DUF1190) 67 211 1.0E-19 T 09-03-2017 IPR009576 Biofilm formation YgiB RG43_RS10625 becfd57e38506fd6bdcacad24be30708 306 SUPERFAMILY SSF103481 196 287 7.19E-11 T 09-03-2017 RG43_RS10625 becfd57e38506fd6bdcacad24be30708 306 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 20 281 2.9E-71 T 09-03-2017 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 RG43_RS10625 becfd57e38506fd6bdcacad24be30708 306 SUPERFAMILY SSF103481 43 144 9.81E-11 T 09-03-2017 RG43_RS10625 becfd57e38506fd6bdcacad24be30708 306 Pfam PF00892 EamA-like transporter family 14 140 8.2E-24 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 RG43_RS10625 becfd57e38506fd6bdcacad24be30708 306 Pfam PF00892 EamA-like transporter family 150 284 7.4E-19 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 RG43_RS22790 8e45ccea21f648f7711eaa8914e50a61 48 Pfam PF08085 Entericidin EcnA/B family 23 43 1.6E-8 T 09-03-2017 IPR012556 Entericidin A/B GO:0009636|GO:0016020 RG43_RS13940 ddd341e65be00fcbd31d5766cf18bb66 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 292 1.6E-18 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS13940 ddd341e65be00fcbd31d5766cf18bb66 296 Gene3D G3DSA:1.10.3720.10 86 290 2.7E-17 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS13940 ddd341e65be00fcbd31d5766cf18bb66 296 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 16 66 2.6E-9 T 09-03-2017 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RG43_RS13940 ddd341e65be00fcbd31d5766cf18bb66 296 SUPERFAMILY SSF161098 90 277 7.59E-20 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS08210 9117bbc343b0b643f07748ca67d2c7ad 162 Pfam PF02674 Colicin V production protein 4 141 1.6E-35 T 09-03-2017 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 RG43_RS14145 0cd749dd0521af3b61f6666018cb41b3 520 PRINTS PR00095 Anthranilate synthase component I signature 350 363 6.9E-24 T 09-03-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 RG43_RS14145 0cd749dd0521af3b61f6666018cb41b3 520 PRINTS PR00095 Anthranilate synthase component I signature 444 458 6.9E-24 T 09-03-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 RG43_RS14145 0cd749dd0521af3b61f6666018cb41b3 520 PRINTS PR00095 Anthranilate synthase component I signature 364 377 6.9E-24 T 09-03-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 RG43_RS14145 0cd749dd0521af3b61f6666018cb41b3 520 PRINTS PR00095 Anthranilate synthase component I signature 459 473 6.9E-24 T 09-03-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 RG43_RS14145 0cd749dd0521af3b61f6666018cb41b3 520 Pfam PF04715 Anthranilate synthase component I, N terminal region 19 191 5.0E-13 T 09-03-2017 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 RG43_RS14145 0cd749dd0521af3b61f6666018cb41b3 520 Gene3D G3DSA:3.60.120.10 4 516 1.4E-161 T 09-03-2017 IPR005801 ADC synthase GO:0009058 RG43_RS14145 0cd749dd0521af3b61f6666018cb41b3 520 SUPERFAMILY SSF56322 7 516 1.7E-164 T 09-03-2017 IPR005801 ADC synthase GO:0009058 RG43_RS14145 0cd749dd0521af3b61f6666018cb41b3 520 Pfam PF00425 chorismate binding enzyme 242 502 5.1E-82 T 09-03-2017 IPR015890 Chorismate-utilising enzyme, C-terminal RG43_RS14145 0cd749dd0521af3b61f6666018cb41b3 520 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 17 515 7.9E-280 T 09-03-2017 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 RG43_RS14145 0cd749dd0521af3b61f6666018cb41b3 520 PIRSF PIRSF001373 1 520 8.9E-251 T 09-03-2017 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 RG43_RS17155 395fd1722261cade9f0faf7819042e68 477 Pfam PF00939 Sodium:sulfate symporter transmembrane region 4 474 4.1E-183 T 09-03-2017 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 RG43_RS17155 395fd1722261cade9f0faf7819042e68 477 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 23 468 8.2E-167 T 09-03-2017 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 RG43_RS17155 395fd1722261cade9f0faf7819042e68 477 PIRSF PIRSF002457 1 474 4.7E-150 T 09-03-2017 IPR030676 Citrate carrier CitT-related RG43_RS08885 882b23dd4426ba4507b22747798f12cb 114 ProDom PD073777 YEJG CYTOPLASMIC SIMILAR Y2914 YPO1269 STY2456 ECS3073 ESCHERICHIA COLI 1 114 2.0E-62 T 09-03-2017 IPR020489 Uncharacterised protein family YejG RG43_RS08885 882b23dd4426ba4507b22747798f12cb 114 Pfam PF13989 YejG-like protein 4 108 1.5E-48 T 09-03-2017 IPR020489 Uncharacterised protein family YejG RG43_RS24560 d893c87f673831389b65740e236439fc 72 Pfam PF01402 Ribbon-helix-helix protein, copG family 6 43 3.8E-11 T 09-03-2017 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 RG43_RS06615 c834d0ff0d080dbf0afeaf9e7d14e549 96 Gene3D G3DSA:3.10.20.280 4 89 1.1E-37 T 09-03-2017 IPR005346 RnfH protein RG43_RS06615 c834d0ff0d080dbf0afeaf9e7d14e549 96 Hamap MF_00460 Protein RnfH [rnfH]. 5 95 25.828 T 09-03-2017 IPR005346 RnfH protein RG43_RS06615 c834d0ff0d080dbf0afeaf9e7d14e549 96 SUPERFAMILY SSF54285 4 79 6.28E-26 T 09-03-2017 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RG43_RS06615 c834d0ff0d080dbf0afeaf9e7d14e549 96 Pfam PF03658 RnfH family Ubiquitin 5 87 2.0E-34 T 09-03-2017 IPR005346 RnfH protein RG43_RS15135 2d8841d0af35a27834efe09cc09d3e22 106 Pfam PF10848 Protein of unknown function (DUF2655) 1 82 2.5E-61 T 09-03-2017 IPR020371 Uncharacterised protein family YceQ RG43_RS15135 2d8841d0af35a27834efe09cc09d3e22 106 ProDom PD078424 YCEQ 1 82 1.0E-43 T 09-03-2017 IPR020371 Uncharacterised protein family YceQ RG43_RS19805 9eedb5517f09f78a67b2daff1c916936 109 TIGRFAM TIGR01715 phage_lam_T: phage tail assembly protein T 2 106 2.6E-40 T 09-03-2017 IPR009350 Minor tail T RG43_RS19805 9eedb5517f09f78a67b2daff1c916936 109 Pfam PF06223 Minor tail protein T 6 105 8.1E-40 T 09-03-2017 IPR009350 Minor tail T RG43_RS09950 6b5dab8665664d9033bada6077f9f47a 173 SUPERFAMILY SSF48295 2 60 1.88E-11 T 09-03-2017 IPR010921 Trp repressor/replication initiator GO:0043565 RG43_RS09950 6b5dab8665664d9033bada6077f9f47a 173 SUPERFAMILY SSF48295 63 121 1.62E-10 T 09-03-2017 IPR010921 Trp repressor/replication initiator GO:0043565 RG43_RS09950 6b5dab8665664d9033bada6077f9f47a 173 Gene3D G3DSA:1.10.10.60 9 54 1.5E-4 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS09950 6b5dab8665664d9033bada6077f9f47a 173 Gene3D G3DSA:1.10.10.60 65 166 1.8E-6 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS09950 6b5dab8665664d9033bada6077f9f47a 173 Pfam PF13518 Helix-turn-helix domain 68 114 8.4E-10 T 09-03-2017 RG43_RS09950 6b5dab8665664d9033bada6077f9f47a 173 Pfam PF13518 Helix-turn-helix domain 10 60 4.9E-9 T 09-03-2017 RG43_RS24210 22f3164d61e9507c73480b6e3728db65 159 Pfam PF06995 Phage P2 GpU 6 125 1.7E-44 T 09-03-2017 IPR009734 Myoviridae, GpU RG43_RS24210 22f3164d61e9507c73480b6e3728db65 159 PIRSF PIRSF029208 1 154 1.1E-62 T 09-03-2017 IPR016912 Bacteriophage P2, GpU RG43_RS02085 7621a2a06ae34e441daf7bbb8b7f1d15 434 Pfam PF10797 Protein of unknown function 6 431 3.9E-171 T 09-03-2017 IPR019733 Uncharacterised protein family YhfT RG43_RS23485 5f4a091f353e8d790ec6dec5d93b6b3d 296 SUPERFAMILY SSF161098 8 296 1.78E-69 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS23485 5f4a091f353e8d790ec6dec5d93b6b3d 296 Gene3D G3DSA:1.10.3720.10 5 283 9.3E-64 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS23485 5f4a091f353e8d790ec6dec5d93b6b3d 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 287 1.2E-15 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS24380 fc4bd819e45678cd23f9b52b29efa367 150 Gene3D G3DSA:3.10.480.10 3 71 7.0E-9 T 09-03-2017 RG43_RS24380 fc4bd819e45678cd23f9b52b29efa367 150 SUPERFAMILY SSF88697 3 86 9.44E-15 T 09-03-2017 IPR015947 PUA-like domain RG43_RS24380 fc4bd819e45678cd23f9b52b29efa367 150 SMART SM01022 7 107 3.2E-8 T 09-03-2017 IPR007374 ASCH domain RG43_RS24380 fc4bd819e45678cd23f9b52b29efa367 150 Pfam PF12961 Domain of Unknown Function with PDB structure (DUF3850) 5 76 9.4E-24 T 09-03-2017 RG43_RS05545 95fa2957c0d0ce537fd4853f7cdc0796 229 Pfam PF02976 DNA mismatch repair enzyme MutH 59 157 1.5E-34 T 09-03-2017 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 RG43_RS05545 95fa2957c0d0ce537fd4853f7cdc0796 229 SUPERFAMILY SSF52980 7 228 6.97E-80 T 09-03-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 RG43_RS05545 95fa2957c0d0ce537fd4853f7cdc0796 229 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 229 156.554 T 09-03-2017 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 RG43_RS05545 95fa2957c0d0ce537fd4853f7cdc0796 229 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 10 226 4.8E-116 T 09-03-2017 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 RG43_RS05545 95fa2957c0d0ce537fd4853f7cdc0796 229 SMART SM00927 59 157 1.4E-64 T 09-03-2017 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 RG43_RS05545 95fa2957c0d0ce537fd4853f7cdc0796 229 Gene3D G3DSA:3.40.600.10 7 227 6.4E-81 T 09-03-2017 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 RG43_RS24475 9419eebcc16055d41c630233750eec3e 344 Hamap MF_01532 L-rhamnose-proton symporter [rhaT]. 1 344 46.512 T 09-03-2017 IPR004673 L-rhamnose-proton symport, RhaT GO:0008645|GO:0015153|GO:0016021 RG43_RS24475 9419eebcc16055d41c630233750eec3e 344 Pfam PF06379 L-rhamnose-proton symport protein (RhaT) 1 343 6.8E-218 T 09-03-2017 IPR004673 L-rhamnose-proton symport, RhaT GO:0008645|GO:0015153|GO:0016021 RG43_RS24475 9419eebcc16055d41c630233750eec3e 344 TIGRFAM TIGR00776 RhaT: RhaT L-rhamnose-proton symporter family protein 7 342 3.0E-114 T 09-03-2017 IPR004673 L-rhamnose-proton symport, RhaT GO:0008645|GO:0015153|GO:0016021 RG43_RS21575 d95d12290aaa87a91f47d25299cfb6ce 157 PIRSF PIRSF003174 1 157 9.7E-70 T 09-03-2017 IPR010292 Uncharacterised protein family CreA RG43_RS21575 d95d12290aaa87a91f47d25299cfb6ce 157 Pfam PF05981 CreA protein 24 155 3.3E-58 T 09-03-2017 IPR010292 Uncharacterised protein family CreA RG43_RS15620 a30d0e06a92b22bb2c52fd3c733dfe1c 357 Pfam PF12801 4Fe-4S binding domain 201 245 9.2E-8 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS15620 a30d0e06a92b22bb2c52fd3c733dfe1c 357 Pfam PF12801 4Fe-4S binding domain 97 142 1.2E-14 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RG43_RS15620 a30d0e06a92b22bb2c52fd3c733dfe1c 357 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 251 262 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS15620 a30d0e06a92b22bb2c52fd3c733dfe1c 357 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 278 289 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RG43_RS15620 a30d0e06a92b22bb2c52fd3c733dfe1c 357 Gene3D G3DSA:3.30.70.20 216 301 4.4E-15 T 09-03-2017 RG43_RS15620 a30d0e06a92b22bb2c52fd3c733dfe1c 357 SUPERFAMILY SSF54862 110 129 1.2E-22 T 09-03-2017 RG43_RS15620 a30d0e06a92b22bb2c52fd3c733dfe1c 357 SUPERFAMILY SSF54862 172 291 1.2E-22 T 09-03-2017 RG43_RS18955 be93a420e442caf6510839e8e8943f61 615 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 601 2.4E-151 T 09-03-2017 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 RG43_RS18955 be93a420e442caf6510839e8e8943f61 615 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 615 51.093 T 09-03-2017 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 RG43_RS18955 be93a420e442caf6510839e8e8943f61 615 Pfam PF02355 Protein export membrane protein 433 601 2.0E-15 T 09-03-2017 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RG43_RS18955 be93a420e442caf6510839e8e8943f61 615 SUPERFAMILY SSF82866 410 606 2.35E-40 T 09-03-2017 RG43_RS18955 be93a420e442caf6510839e8e8943f61 615 SUPERFAMILY SSF82866 337 349 2.35E-40 T 09-03-2017 RG43_RS18955 be93a420e442caf6510839e8e8943f61 615 Gene3D G3DSA:1.20.1640.10 443 610 3.6E-25 T 09-03-2017 RG43_RS18955 be93a420e442caf6510839e8e8943f61 615 Pfam PF07549 SecD/SecF GG Motif 120 140 5.0E-6 T 09-03-2017 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site RG43_RS18955 be93a420e442caf6510839e8e8943f61 615 Pfam PF13721 SecD export protein N-terminal TM region 2 103 7.6E-38 T 09-03-2017 IPR027398 SecD export protein N-terminal TM domain RG43_RS18955 be93a420e442caf6510839e8e8943f61 615 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 345 594 6.0E-84 T 09-03-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RG43_RS20035 0e2ca7ea72b85a3484e7983d807e113c 152 SUPERFAMILY SSF53271 4 144 6.29E-32 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like RG43_RS20035 0e2ca7ea72b85a3484e7983d807e113c 152 Pfam PF00156 Phosphoribosyl transferase domain 11 144 1.4E-15 T 09-03-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 RG43_RS20035 0e2ca7ea72b85a3484e7983d807e113c 152 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 152 40.275 T 09-03-2017 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 RG43_RS20035 0e2ca7ea72b85a3484e7983d807e113c 152 Gene3D G3DSA:3.40.50.2020 1 145 9.5E-45 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like RG43_RS23000 603c045291906201e96d39c9eee49720 253 SMART SM00342 162 244 5.4E-28 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS23000 603c045291906201e96d39c9eee49720 253 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 198 240 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RG43_RS23000 603c045291906201e96d39c9eee49720 253 Gene3D G3DSA:1.10.10.60 197 247 6.7E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS23000 603c045291906201e96d39c9eee49720 253 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 213 228 3.7E-6 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RG43_RS23000 603c045291906201e96d39c9eee49720 253 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 228 244 3.7E-6 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RG43_RS23000 603c045291906201e96d39c9eee49720 253 Pfam PF12833 Helix-turn-helix domain 169 244 1.1E-13 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RG43_RS23000 603c045291906201e96d39c9eee49720 253 SUPERFAMILY SSF46689 197 248 2.69E-11 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS08815 5711778d64fa290308702bf4c293e48d 350 Pfam PF03918 Cytochrome C biogenesis protein 7 129 7.6E-51 T 09-03-2017 IPR005616 CcmH/CycL/Ccl2/NrfF family RG43_RS08815 5711778d64fa290308702bf4c293e48d 350 Gene3D G3DSA:1.25.40.10 211 259 7.0E-7 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS08815 5711778d64fa290308702bf4c293e48d 350 Gene3D G3DSA:1.25.40.10 260 343 1.5E-27 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS08815 5711778d64fa290308702bf4c293e48d 350 SUPERFAMILY SSF48452 218 327 1.8E-18 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS22240 034d6f10ff71320bdea0aeb6aba4f8dc 62 Pfam PF08052 PyrBI operon leader peptide 20 58 1.3E-28 T 09-03-2017 IPR012602 PyrBI operon leader peptide GO:0019856 RG43_RS02215 d846b3446c74769630da84764ee91886 196 SUPERFAMILY SSF54534 2 140 2.75E-33 T 09-03-2017 RG43_RS02215 d846b3446c74769630da84764ee91886 196 Gene3D G3DSA:3.10.50.40 2 80 5.2E-16 T 09-03-2017 RG43_RS02215 d846b3446c74769630da84764ee91886 196 Gene3D G3DSA:3.10.50.40 126 141 5.2E-16 T 09-03-2017 RG43_RS02215 d846b3446c74769630da84764ee91886 196 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 136 1.6E-9 T 09-03-2017 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 RG43_RS08130 c321808e0a17faecb5dada7d66ebe249 274 Gene3D G3DSA:3.30.1380.10 21 272 2.1E-107 T 09-03-2017 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 RG43_RS08130 c321808e0a17faecb5dada7d66ebe249 274 Hamap MF_01623 Penicillin-insensitive murein endopeptidase [mepA]. 1 274 70.985 T 09-03-2017 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 RG43_RS08130 c321808e0a17faecb5dada7d66ebe249 274 PIRSF PIRSF018455 1 274 7.2E-121 T 09-03-2017 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 RG43_RS08130 c321808e0a17faecb5dada7d66ebe249 274 SUPERFAMILY SSF55166 21 272 5.41E-103 T 09-03-2017 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 RG43_RS08130 c321808e0a17faecb5dada7d66ebe249 274 Pfam PF03411 Penicillin-insensitive murein endopeptidase 36 270 2.6E-94 T 09-03-2017 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 RG43_RS00595 62abc9cefc58488fa51eb6181ba1c3b8 230 Pfam PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) 1 229 5.9E-130 T 09-03-2017 IPR009330 Lipopolysaccharide core heptose(II) kinase RG43_RS00595 62abc9cefc58488fa51eb6181ba1c3b8 230 SUPERFAMILY SSF56112 32 179 9.48E-9 T 09-03-2017 IPR011009 Protein kinase-like domain RG43_RS14995 23afb6361a55d3b7552157ff8cb897d3 274 Hamap MF_01604 Thiamine kinase [thiK]. 1 274 70.413 T 09-03-2017 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896 RG43_RS14995 23afb6361a55d3b7552157ff8cb897d3 274 TIGRFAM TIGR02721 ycfN_thiK: thiamine kinase 26 270 5.2E-101 T 09-03-2017 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896 RG43_RS14995 23afb6361a55d3b7552157ff8cb897d3 274 Gene3D G3DSA:3.90.1200.10 75 264 3.2E-13 T 09-03-2017 RG43_RS14995 23afb6361a55d3b7552157ff8cb897d3 274 Pfam PF01636 Phosphotransferase enzyme family 25 222 5.5E-14 T 09-03-2017 IPR002575 Aminoglycoside phosphotransferase RG43_RS14995 23afb6361a55d3b7552157ff8cb897d3 274 SUPERFAMILY SSF56112 21 268 1.6E-28 T 09-03-2017 IPR011009 Protein kinase-like domain RG43_RS11570 97283d74e5c25dd5df066ee27aaf0cb2 454 Pfam PF03315 Serine dehydratase beta chain 3 155 6.8E-57 T 09-03-2017 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 RG43_RS11570 97283d74e5c25dd5df066ee27aaf0cb2 454 Gene3D G3DSA:3.30.1330.90 10 158 2.2E-55 T 09-03-2017 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 RG43_RS11570 97283d74e5c25dd5df066ee27aaf0cb2 454 Pfam PF03313 Serine dehydratase alpha chain 186 448 9.5E-96 T 09-03-2017 IPR005130 Serine dehydratase-like, alpha subunit RG43_RS11570 97283d74e5c25dd5df066ee27aaf0cb2 454 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 1.7E-231 T 09-03-2017 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 RG43_RS11570 97283d74e5c25dd5df066ee27aaf0cb2 454 SUPERFAMILY SSF143548 16 158 1.02E-46 T 09-03-2017 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 RG43_RS12735 2b323be92fdaeca92a34aa2b4b3638da 284 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 274 1.0E-114 T 09-03-2017 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 RG43_RS06340 0001315b8bcda0cfacb1a2df673341d4 321 PIRSF PIRSF004692 1 321 1.0E-121 T 09-03-2017 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 RG43_RS06340 0001315b8bcda0cfacb1a2df673341d4 321 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 43 311 1.8E-134 T 09-03-2017 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 RG43_RS06340 0001315b8bcda0cfacb1a2df673341d4 321 Gene3D G3DSA:3.40.50.10490 23 192 1.0E-40 T 09-03-2017 RG43_RS06340 0001315b8bcda0cfacb1a2df673341d4 321 SUPERFAMILY SSF53697 10 255 9.34E-53 T 09-03-2017 RG43_RS06340 0001315b8bcda0cfacb1a2df673341d4 321 Pfam PF01380 SIS domain 39 169 2.1E-29 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 RG43_RS06340 0001315b8bcda0cfacb1a2df673341d4 321 Gene3D G3DSA:3.10.580.10 193 317 1.4E-29 T 09-03-2017 RG43_RS06340 0001315b8bcda0cfacb1a2df673341d4 321 SUPERFAMILY SSF54631 260 317 3.88E-8 T 09-03-2017 RG43_RS06340 0001315b8bcda0cfacb1a2df673341d4 321 Pfam PF00571 CBS domain 282 315 5.5E-4 T 09-03-2017 IPR000644 CBS domain RG43_RS06340 0001315b8bcda0cfacb1a2df673341d4 321 Pfam PF00571 CBS domain 199 256 8.3E-4 T 09-03-2017 IPR000644 CBS domain RG43_RS25635 344f447b7988c3072dc40e0fc1b81a54 119 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 18 105 3.0E-45 T 09-03-2017 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 RG43_RS25635 344f447b7988c3072dc40e0fc1b81a54 119 Gene3D G3DSA:3.30.230.10 5 116 3.2E-34 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RG43_RS25635 344f447b7988c3072dc40e0fc1b81a54 119 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 56 70 - T 09-03-2017 IPR020539 Ribonuclease P, conserved site GO:0004526 RG43_RS25635 344f447b7988c3072dc40e0fc1b81a54 119 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 5 115 7.5E-38 T 09-03-2017 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 RG43_RS25635 344f447b7988c3072dc40e0fc1b81a54 119 Pfam PF00825 Ribonuclease P 6 111 1.8E-32 T 09-03-2017 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 RG43_RS25635 344f447b7988c3072dc40e0fc1b81a54 119 SUPERFAMILY SSF54211 5 115 2.48E-31 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold RG43_RS25635 344f447b7988c3072dc40e0fc1b81a54 119 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 115 17.951 T 09-03-2017 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 RG43_RS01805 7a26bec68580f0dce3dab0b9dd2fb499 501 Pfam PF01266 FAD dependent oxidoreductase 5 323 3.3E-46 T 09-03-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RG43_RS01805 7a26bec68580f0dce3dab0b9dd2fb499 501 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 352 362 - T 09-03-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 RG43_RS01805 7a26bec68580f0dce3dab0b9dd2fb499 501 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 359 4.7E-28 T 09-03-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 RG43_RS01805 7a26bec68580f0dce3dab0b9dd2fb499 501 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 17 27 4.7E-28 T 09-03-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 RG43_RS01805 7a26bec68580f0dce3dab0b9dd2fb499 501 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 4 16 4.7E-28 T 09-03-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 RG43_RS01805 7a26bec68580f0dce3dab0b9dd2fb499 501 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 78 90 4.7E-28 T 09-03-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 RG43_RS01805 7a26bec68580f0dce3dab0b9dd2fb499 501 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 313 319 4.7E-28 T 09-03-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 RG43_RS01805 7a26bec68580f0dce3dab0b9dd2fb499 501 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 33 45 4.7E-28 T 09-03-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 RG43_RS01805 7a26bec68580f0dce3dab0b9dd2fb499 501 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 381 496 2.2E-12 T 09-03-2017 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 RG43_RS01805 7a26bec68580f0dce3dab0b9dd2fb499 501 SUPERFAMILY SSF51905 312 374 5.18E-34 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS01805 7a26bec68580f0dce3dab0b9dd2fb499 501 SUPERFAMILY SSF51905 1 260 5.18E-34 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS01805 7a26bec68580f0dce3dab0b9dd2fb499 501 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 9 26 - T 09-03-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 RG43_RS01805 7a26bec68580f0dce3dab0b9dd2fb499 501 Gene3D G3DSA:3.50.50.60 2 262 1.7E-38 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS01805 7a26bec68580f0dce3dab0b9dd2fb499 501 SUPERFAMILY SSF54373 226 319 2.16E-6 T 09-03-2017 RG43_RS18410 cc327b38f81f218a506b3004901b7604 484 TIGRFAM TIGR00800 ncs1: NCS1 nucleoside transporter family 14 455 6.0E-136 T 09-03-2017 IPR012681 Nucleobase cation symporter-1, NCS1 GO:0005215|GO:0006810|GO:0016020 RG43_RS18410 cc327b38f81f218a506b3004901b7604 484 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 19 457 3.7E-139 T 09-03-2017 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 RG43_RS12005 ce10aa253040acdd5d0d16e8032951e5 96 Pfam PF11080 Protein of unknown function (DUF2622) 1 93 2.8E-40 T 09-03-2017 IPR022597 Endoribonuclease GhoS GO:0004521 RG43_RS12005 ce10aa253040acdd5d0d16e8032951e5 96 ProDom PD066031 YDIZ CYTOPLASMIC STY1786 1 96 8.0E-49 T 09-03-2017 IPR020499 Uncharacterised protein family YdiZ RG43_RS04310 17243e442f2012cd501123b8a1a9b22a 252 Gene3D G3DSA:3.40.50.300 23 240 2.4E-15 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS04310 17243e442f2012cd501123b8a1a9b22a 252 SUPERFAMILY SSF52540 23 47 2.18E-9 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS04310 17243e442f2012cd501123b8a1a9b22a 252 SUPERFAMILY SSF52540 96 196 2.18E-9 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS26685 17243e442f2012cd501123b8a1a9b22a 252 Gene3D G3DSA:3.40.50.300 23 240 2.4E-15 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS26685 17243e442f2012cd501123b8a1a9b22a 252 SUPERFAMILY SSF52540 23 47 2.18E-9 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS26685 17243e442f2012cd501123b8a1a9b22a 252 SUPERFAMILY SSF52540 96 196 2.18E-9 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS05775 a7644b4dd0b97c3ac8d2de0b4e84f621 85 SUPERFAMILY SSF50685 12 73 4.88E-19 T 09-03-2017 IPR009009 RlpA-like protein, double-psi beta-barrel domain RG43_RS05775 a7644b4dd0b97c3ac8d2de0b4e84f621 85 Gene3D G3DSA:2.40.40.10 9 73 4.2E-14 T 09-03-2017 IPR009009 RlpA-like protein, double-psi beta-barrel domain RG43_RS05775 a7644b4dd0b97c3ac8d2de0b4e84f621 85 Pfam PF06725 3D domain 16 74 5.1E-17 T 09-03-2017 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 RG43_RS00860 4c12f5dc56503d953e072ea3353480bf 155 Gene3D G3DSA:2.60.120.370 1 151 4.3E-52 T 09-03-2017 IPR004375 YhcH/YjgK/YiaL family RG43_RS00860 4c12f5dc56503d953e072ea3353480bf 155 Pfam PF04074 Domain of unknown function (DUF386) 1 149 1.3E-44 T 09-03-2017 IPR004375 YhcH/YjgK/YiaL family RG43_RS00860 4c12f5dc56503d953e072ea3353480bf 155 SUPERFAMILY SSF51197 1 152 9.34E-46 T 09-03-2017 RG43_RS00860 4c12f5dc56503d953e072ea3353480bf 155 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 153 5.4E-66 T 09-03-2017 IPR004375 YhcH/YjgK/YiaL family RG43_RS06545 942b12eda437f2c54b6f8af513e5c5e4 174 Pfam PF00581 Rhodanese-like domain 7 99 1.9E-10 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS06545 942b12eda437f2c54b6f8af513e5c5e4 174 SMART SM00450 6 102 2.5E-15 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS06545 942b12eda437f2c54b6f8af513e5c5e4 174 Pfam PF11127 Protein of unknown function (DUF2892) 115 171 6.0E-10 T 09-03-2017 IPR021309 Protein of unknown function DUF2892 RG43_RS06545 942b12eda437f2c54b6f8af513e5c5e4 174 Gene3D G3DSA:3.40.250.10 4 107 9.7E-19 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS06545 942b12eda437f2c54b6f8af513e5c5e4 174 SUPERFAMILY SSF52821 2 154 4.19E-25 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS11695 232ad8597089af81cdee769a36acf4fc 115 Pfam PF04343 Protein of unknown function, DUF488 5 112 1.6E-31 T 09-03-2017 IPR007438 Protein of unknown function DUF488 RG43_RS10375 2721d2b7c98e6be82a42716d3c08007f 71 Pfam PF04971 Bacteriophage P21 holin S 4 71 1.3E-44 T 09-03-2017 IPR007054 Lysis protein S RG43_RS10375 2721d2b7c98e6be82a42716d3c08007f 71 PIRSF PIRSF030786 1 71 1.3E-43 T 09-03-2017 IPR007054 Lysis protein S RG43_RS19155 1733acdc9f71ac9fc86335568a4aaa74 275 Gene3D G3DSA:1.10.3720.10 71 269 1.6E-29 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS19155 1733acdc9f71ac9fc86335568a4aaa74 275 SUPERFAMILY SSF161098 75 258 1.96E-35 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS19155 1733acdc9f71ac9fc86335568a4aaa74 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 269 2.6E-22 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS15325 6a70ba0b8a093e5dc16ee35df8ef7a1c 75 Pfam PF07119 Protein of unknown function (DUF1375) 9 69 8.1E-10 T 09-03-2017 IPR010780 Protein of unknown function DUF1375 RG43_RS19305 a9142c2b92a158387337c57f8e52150b 299 SUPERFAMILY SSF46785 4 111 5.09E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS19305 a9142c2b92a158387337c57f8e52150b 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.9E-27 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS19305 a9142c2b92a158387337c57f8e52150b 299 Gene3D G3DSA:3.40.190.10 176 260 5.9E-23 T 09-03-2017 RG43_RS19305 a9142c2b92a158387337c57f8e52150b 299 SUPERFAMILY SSF53850 90 291 2.84E-48 T 09-03-2017 RG43_RS19305 a9142c2b92a158387337c57f8e52150b 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.7E-13 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS19305 a9142c2b92a158387337c57f8e52150b 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.7E-13 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS19305 a9142c2b92a158387337c57f8e52150b 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.7E-13 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS19305 a9142c2b92a158387337c57f8e52150b 299 Gene3D G3DSA:3.40.190.10 90 175 9.7E-23 T 09-03-2017 RG43_RS19305 a9142c2b92a158387337c57f8e52150b 299 Pfam PF03466 LysR substrate binding domain 88 290 4.7E-54 T 09-03-2017 IPR005119 LysR, substrate-binding RG43_RS19305 a9142c2b92a158387337c57f8e52150b 299 Gene3D G3DSA:1.10.10.10 4 86 9.5E-32 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS25040 67a9b142e28cf1dec8fcebd110af75be 254 Pfam PF09992 Phosphodiester glycosidase 84 235 5.8E-17 T 09-03-2017 IPR018711 Phosphodiester glycosidase RG43_RS08985 cafd1e2e0efa9aea1e70ee57e90b065b 313 Hamap MF_01433 Pyrimidine-specific ribonucleoside hydrolase RihB [rihB]. 1 313 85.974 T 09-03-2017 IPR022977 Pyrimidine-specific ribonucleoside hydrolase RihB GO:0046133|GO:0050263 KEGG: 00230+3.2.2.8|KEGG: 00240+3.2.2.8 RG43_RS08985 cafd1e2e0efa9aea1e70ee57e90b065b 313 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 9 19 - T 09-03-2017 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 RG43_RS08985 cafd1e2e0efa9aea1e70ee57e90b065b 313 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 4 299 7.4E-72 T 09-03-2017 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain RG43_RS08985 cafd1e2e0efa9aea1e70ee57e90b065b 313 Gene3D G3DSA:3.90.245.10 1 307 2.7E-106 T 09-03-2017 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain RG43_RS08985 cafd1e2e0efa9aea1e70ee57e90b065b 313 SUPERFAMILY SSF53590 3 307 1.96E-101 T 09-03-2017 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain RG43_RS25015 ff47ac8e42a5b1fb195532b2ad3ea29e 296 SUPERFAMILY SSF103481 42 145 7.19E-14 T 09-03-2017 RG43_RS25015 ff47ac8e42a5b1fb195532b2ad3ea29e 296 SUPERFAMILY SSF103481 187 285 1.96E-8 T 09-03-2017 RG43_RS25015 ff47ac8e42a5b1fb195532b2ad3ea29e 296 Pfam PF00892 EamA-like transporter family 152 284 2.1E-6 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 RG43_RS25015 ff47ac8e42a5b1fb195532b2ad3ea29e 296 Pfam PF00892 EamA-like transporter family 9 142 6.3E-14 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 RG43_RS25015 ff47ac8e42a5b1fb195532b2ad3ea29e 296 TIGRFAM TIGR00688 rarD: protein RarD 8 261 3.3E-118 T 09-03-2017 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 RG43_RS11710 359cc2ab9a43705c447cacc1a5617997 148 Pfam PF04284 Protein of unknown function (DUF441) 7 145 7.4E-46 T 09-03-2017 IPR007382 Uncharacterised protein family UPF0756, transmembrame RG43_RS11710 359cc2ab9a43705c447cacc1a5617997 148 ProDom PD021096 MEMBRANE YEAL PRECURSOR SIGNAL PROTEIN TRANSMEMBRANE YTWI HI1074 INTEGRAL SPANNING 1 130 1.0E-41 T 09-03-2017 IPR007382 Uncharacterised protein family UPF0756, transmembrame RG43_RS11710 359cc2ab9a43705c447cacc1a5617997 148 Hamap MF_01874 UPF0756 membrane protein YeaL [yeaL]. 3 148 18.673 T 09-03-2017 IPR007382 Uncharacterised protein family UPF0756, transmembrame RG43_RS09345 5dd5ccb08ee0ca604c65033574ce4992 425 Pfam PF03825 Nucleoside H+ symporter 1 405 1.9E-185 T 09-03-2017 RG43_RS09345 5dd5ccb08ee0ca604c65033574ce4992 425 TIGRFAM TIGR00889 2A0110: nucleoside transporter 1 418 1.7E-197 T 09-03-2017 IPR004740 Nucleoside:H+ symporter GO:0005337|GO:0015858|GO:0016021 RG43_RS09345 5dd5ccb08ee0ca604c65033574ce4992 425 SUPERFAMILY SSF103473 6 404 2.75E-41 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS09345 5dd5ccb08ee0ca604c65033574ce4992 425 Gene3D G3DSA:1.20.1250.20 5 189 1.4E-14 T 09-03-2017 RG43_RS09345 5dd5ccb08ee0ca604c65033574ce4992 425 Gene3D G3DSA:1.20.1250.20 202 406 5.9E-25 T 09-03-2017 RG43_RS13730 d0872fdca7764c1ba04cb966bae40205 85 Pfam PF10749 Protein of unknown function (DUF2534) 5 82 7.5E-40 T 09-03-2017 IPR019685 Protein of unknown function DUF2534 RG43_RS13905 ad34b5db7f003a900d614423c2b08051 254 Pfam PF07722 Peptidase C26 8 224 1.6E-68 T 09-03-2017 IPR011697 Peptidase C26 GO:0006541|GO:0016787 RG43_RS13905 ad34b5db7f003a900d614423c2b08051 254 SUPERFAMILY SSF52317 23 246 2.29E-39 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like RG43_RS13905 ad34b5db7f003a900d614423c2b08051 254 Gene3D G3DSA:3.40.50.880 6 247 1.9E-52 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like RG43_RS21960 e5b60efd5b317491c57ba470fbfae8d2 286 Pfam PF06977 SdiA-regulated 38 281 6.2E-92 T 09-03-2017 IPR009722 SdiA-regulated RG43_RS21960 e5b60efd5b317491c57ba470fbfae8d2 286 Gene3D G3DSA:2.120.10.30 54 283 2.2E-13 T 09-03-2017 IPR011042 Six-bladed beta-propeller, TolB-like RG43_RS21960 e5b60efd5b317491c57ba470fbfae8d2 286 SUPERFAMILY SSF50956 15 282 8.24E-39 T 09-03-2017 RG43_RS19040 2803dfeb0ae7ed649845703d52f5fbb8 94 Hamap MF_01537 UPF0345 protein YaiE [yaiE]. 1 94 25.868 T 09-03-2017 IPR009664 Protein of unknown function DUF1255 RG43_RS19040 2803dfeb0ae7ed649845703d52f5fbb8 94 Pfam PF06865 Protein of unknown function (DUF1255) 3 93 1.2E-33 T 09-03-2017 IPR009664 Protein of unknown function DUF1255 RG43_RS19040 2803dfeb0ae7ed649845703d52f5fbb8 94 SUPERFAMILY SSF51182 1 94 6.85E-33 T 09-03-2017 IPR011051 RmlC-like cupin domain RG43_RS19040 2803dfeb0ae7ed649845703d52f5fbb8 94 Gene3D G3DSA:2.60.120.10 1 94 1.5E-37 T 09-03-2017 IPR014710 RmlC-like jelly roll fold RG43_RS03555 c7097cf9afa9aea8e4001ef43d56dddb 766 SUPERFAMILY SSF48208 558 764 1.49E-80 T 09-03-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 RG43_RS03555 c7097cf9afa9aea8e4001ef43d56dddb 766 SUPERFAMILY SSF48208 270 530 1.49E-80 T 09-03-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 RG43_RS03555 c7097cf9afa9aea8e4001ef43d56dddb 766 Pfam PF01204 Trehalase 414 761 2.2E-10 T 09-03-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 RG43_RS00475 2acce9fcf722c14b42fcf1f743658501 229 Pfam PF12105 SpoU, rRNA methylase, C-terminal 163 218 1.2E-24 T 09-03-2017 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 RG43_RS00475 2acce9fcf722c14b42fcf1f743658501 229 SUPERFAMILY SSF75217 4 174 1.18E-49 T 09-03-2017 IPR029028 Alpha/beta knot methyltransferases RG43_RS00475 2acce9fcf722c14b42fcf1f743658501 229 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 2 197 36.782 T 09-03-2017 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 RG43_RS00475 2acce9fcf722c14b42fcf1f743658501 229 Gene3D G3DSA:3.40.1280.10 2 174 2.5E-49 T 09-03-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RG43_RS00475 2acce9fcf722c14b42fcf1f743658501 229 Pfam PF00588 SpoU rRNA Methylase family 20 159 1.2E-36 T 09-03-2017 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 RG43_RS17000 aa99cd55b4220aaa39cdf24b9f57e162 113 Pfam PF10765 Protein of unknown function (DUF2591) 2 108 2.0E-17 T 09-03-2017 IPR019701 Bacteriophage P22, NinX RG43_RS00360 d246328aed5804f829ccc3c75ad091c7 419 Pfam PF00665 Integrase core domain 255 369 2.9E-19 T 09-03-2017 IPR001584 Integrase, catalytic core GO:0015074 RG43_RS00360 d246328aed5804f829ccc3c75ad091c7 419 Pfam PF13276 HTH-like domain 183 231 7.2E-15 T 09-03-2017 IPR025948 HTH-like domain RG43_RS00360 d246328aed5804f829ccc3c75ad091c7 419 SUPERFAMILY SSF46689 26 122 2.51E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS00360 d246328aed5804f829ccc3c75ad091c7 419 Pfam PF01527 Transposase 27 98 2.8E-7 T 09-03-2017 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RG43_RS00360 d246328aed5804f829ccc3c75ad091c7 419 Gene3D G3DSA:3.30.420.10 250 408 2.8E-21 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS00360 d246328aed5804f829ccc3c75ad091c7 419 SUPERFAMILY SSF53098 250 409 6.45E-30 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS00360 d246328aed5804f829ccc3c75ad091c7 419 Gene3D G3DSA:1.10.10.60 29 115 3.4E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS22860 2a0aa537b76cdffcf3f95666d621742b 433 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 365 3.2E-145 T 09-03-2017 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 RG43_RS22860 2a0aa537b76cdffcf3f95666d621742b 433 PIRSF PIRSF004539 1 433 2.0E-181 T 09-03-2017 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 RG43_RS22860 2a0aa537b76cdffcf3f95666d621742b 433 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 433 2.2E-210 T 09-03-2017 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 RG43_RS11315 c1e3d41d2a392cbbdca3ca1af6cf7f7d 96 Gene3D G3DSA:1.10.10.710 20 86 8.7E-27 T 09-03-2017 IPR009813 Uncharacterised protein family YebG RG43_RS11315 c1e3d41d2a392cbbdca3ca1af6cf7f7d 96 Pfam PF07130 YebG protein 1 74 6.0E-34 T 09-03-2017 IPR009813 Uncharacterised protein family YebG RG43_RS19455 731e183629abef6bf90692cccf65e716 677 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 55 503 3.7E-182 T 09-03-2017 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 RG43_RS19455 731e183629abef6bf90692cccf65e716 677 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 17 501 1.9E-174 T 09-03-2017 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 RG43_RS19455 731e183629abef6bf90692cccf65e716 677 ProSitePatterns PS01303 BCCT family of transporters signature. 318 327 - T 09-03-2017 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 RG43_RS04975 7ad30a2f9c07ad0dff873afcdc2e3d07 188 Pfam PF02325 YGGT family 10 78 8.1E-22 T 09-03-2017 IPR003425 CCB3/YggT GO:0016020 RG43_RS04975 7ad30a2f9c07ad0dff873afcdc2e3d07 188 Pfam PF02325 YGGT family 104 167 7.7E-16 T 09-03-2017 IPR003425 CCB3/YggT GO:0016020 RG43_RS18970 d0c990cdb92fc8644cf7de3139664913 356 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 344 3.7E-171 T 09-03-2017 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 RG43_RS18970 d0c990cdb92fc8644cf7de3139664913 356 Gene3D G3DSA:2.40.10.240 64 142 1.9E-18 T 09-03-2017 RG43_RS18970 d0c990cdb92fc8644cf7de3139664913 356 Pfam PF02547 Queuosine biosynthesis protein 4 343 5.4E-133 T 09-03-2017 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 RG43_RS18970 d0c990cdb92fc8644cf7de3139664913 356 Gene3D G3DSA:3.40.1780.10 179 344 2.7E-101 T 09-03-2017 RG43_RS18970 d0c990cdb92fc8644cf7de3139664913 356 Gene3D G3DSA:3.40.1780.10 1 62 2.7E-101 T 09-03-2017 RG43_RS18970 d0c990cdb92fc8644cf7de3139664913 356 SUPERFAMILY SSF111337 1 343 5.75E-139 T 09-03-2017 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 RG43_RS18970 d0c990cdb92fc8644cf7de3139664913 356 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 344 47.73 T 09-03-2017 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 RG43_RS11045 fd56555bf7be884ab313102eaabc0485 167 Gene3D G3DSA:2.30.30.40 93 144 1.5E-9 T 09-03-2017 RG43_RS11045 fd56555bf7be884ab313102eaabc0485 167 SUPERFAMILY SSF50341 15 156 5.23E-39 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 RG43_RS11045 fd56555bf7be884ab313102eaabc0485 167 Pfam PF01584 CheW-like domain 18 154 7.4E-36 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 RG43_RS11045 fd56555bf7be884ab313102eaabc0485 167 Gene3D G3DSA:2.40.50.180 56 92 2.0E-9 T 09-03-2017 RG43_RS11045 fd56555bf7be884ab313102eaabc0485 167 SMART SM00260 14 151 6.2E-49 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 RG43_RS24915 55fd13a0c198c423fd8419751cdf55c6 519 SUPERFAMILY SSF52210 353 511 2.38E-8 T 09-03-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 RG43_RS24915 55fd13a0c198c423fd8419751cdf55c6 519 Pfam PF02629 CoA binding domain 189 284 1.3E-12 T 09-03-2017 IPR003781 CoA-binding GO:0048037 RG43_RS24915 55fd13a0c198c423fd8419751cdf55c6 519 Pfam PF00549 CoA-ligase 350 507 4.8E-55 T 09-03-2017 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 RG43_RS24915 55fd13a0c198c423fd8419751cdf55c6 519 Gene3D G3DSA:3.40.50.261 165 289 3.5E-17 T 09-03-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 RG43_RS24915 55fd13a0c198c423fd8419751cdf55c6 519 SUPERFAMILY SSF52210 183 314 3.14E-18 T 09-03-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 RG43_RS20580 3b11f6a87822a51d11103dfc128f7a17 1160 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1031 0.0 T 09-03-2017 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS20580 3b11f6a87822a51d11103dfc128f7a17 1160 SUPERFAMILY SSF89550 6 263 6.47E-18 T 09-03-2017 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 RG43_RS20580 3b11f6a87822a51d11103dfc128f7a17 1160 Pfam PF02811 PHP domain 8 171 6.4E-40 T 09-03-2017 IPR004013 PHP domain GO:0003824 RG43_RS20580 3b11f6a87822a51d11103dfc128f7a17 1160 Pfam PF01336 OB-fold nucleic acid binding domain 1000 1072 2.0E-8 T 09-03-2017 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 RG43_RS20580 3b11f6a87822a51d11103dfc128f7a17 1160 Gene3D G3DSA:3.20.20.140 6 257 1.1E-21 T 09-03-2017 RG43_RS20580 3b11f6a87822a51d11103dfc128f7a17 1160 Pfam PF14579 Helix-hairpin-helix motif 808 897 2.8E-25 T 09-03-2017 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS20580 3b11f6a87822a51d11103dfc128f7a17 1160 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 291 735 4.3E-179 T 09-03-2017 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS20580 3b11f6a87822a51d11103dfc128f7a17 1160 Gene3D G3DSA:1.10.150.280 836 883 1.0E-5 T 09-03-2017 RG43_RS20580 3b11f6a87822a51d11103dfc128f7a17 1160 SMART SM00481 7 74 1.5E-26 T 09-03-2017 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 RG43_RS20580 3b11f6a87822a51d11103dfc128f7a17 1160 Gene3D G3DSA:2.40.50.140 982 1078 7.6E-11 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS11665 6b2a44725c222898af8834d81fe2c51f 60 SUPERFAMILY SSF103063 1 60 3.01E-32 T 09-03-2017 IPR015051 Protein YoaG RG43_RS11665 6b2a44725c222898af8834d81fe2c51f 60 Pfam PF08956 Domain of unknown function (DUF1869) 3 60 5.3E-32 T 09-03-2017 IPR015051 Protein YoaG RG43_RS11665 6b2a44725c222898af8834d81fe2c51f 60 Gene3D G3DSA:3.30.160.220 1 60 2.8E-36 T 09-03-2017 IPR015051 Protein YoaG RG43_RS18060 4fe5875d1804451d495a266564279b9c 248 Gene3D G3DSA:3.40.30.10 105 246 4.3E-35 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS18060 4fe5875d1804451d495a266564279b9c 248 Pfam PF13098 Thioredoxin-like domain 115 241 5.5E-16 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS18060 4fe5875d1804451d495a266564279b9c 248 SUPERFAMILY SSF52833 82 242 2.01E-38 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS18060 4fe5875d1804451d495a266564279b9c 248 SUPERFAMILY SSF54423 19 78 7.98E-23 T 09-03-2017 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal RG43_RS06445 f4b7687a49e4061c8c65ddda7b06c132 518 Pfam PF04262 Glutamate-cysteine ligase 9 380 8.9E-172 T 09-03-2017 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 RG43_RS06445 f4b7687a49e4061c8c65ddda7b06c132 518 SUPERFAMILY SSF55931 4 514 9.81E-203 T 09-03-2017 RG43_RS06445 f4b7687a49e4061c8c65ddda7b06c132 518 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 518 227.977 T 09-03-2017 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 RG43_RS06445 f4b7687a49e4061c8c65ddda7b06c132 518 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 6 517 1.1E-276 T 09-03-2017 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 RG43_RS25810 8ef52e4ae7b1adaf3a97b79e67a3d302 96 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 15 78 2.0E-14 T 09-03-2017 RG43_RS25810 8ef52e4ae7b1adaf3a97b79e67a3d302 96 SUPERFAMILY SSF55021 9 80 3.86E-16 T 09-03-2017 RG43_RS25810 8ef52e4ae7b1adaf3a97b79e67a3d302 96 Pfam PF01842 ACT domain 10 73 5.3E-10 T 09-03-2017 IPR002912 ACT domain GO:0008152|GO:0016597 RG43_RS25810 8ef52e4ae7b1adaf3a97b79e67a3d302 96 Gene3D G3DSA:3.30.70.260 10 82 5.2E-22 T 09-03-2017 RG43_RS13235 9b216dcaeb466d9301f602f26eb95158 189 SMART SM00903 14 158 3.7E-15 T 09-03-2017 IPR002563 Flavin reductase like domain GO:0010181 RG43_RS13235 9b216dcaeb466d9301f602f26eb95158 189 SUPERFAMILY SSF50475 7 186 9.32E-38 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 RG43_RS13235 9b216dcaeb466d9301f602f26eb95158 189 Gene3D G3DSA:2.30.110.10 4 187 1.8E-46 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 RG43_RS13235 9b216dcaeb466d9301f602f26eb95158 189 Pfam PF01613 Flavin reductase like domain 19 151 8.8E-15 T 09-03-2017 IPR002563 Flavin reductase like domain GO:0010181 RG43_RS00940 b5e3ce7dcd4771972900e70f009d1620 102 Pfam PF13983 YsaB-like lipoprotein 28 102 5.3E-42 T 09-03-2017 IPR025728 YsaB-like lipoprotein RG43_RS26910 27e28aa605abb25b1da8104686e90ec1 226 Pfam PF08279 HTH domain 14 48 1.6E-4 T 09-03-2017 IPR013196 Helix-turn-helix, type 11 RG43_RS26910 27e28aa605abb25b1da8104686e90ec1 226 Gene3D G3DSA:1.10.10.10 10 48 2.4E-4 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS26910 27e28aa605abb25b1da8104686e90ec1 226 Pfam PF13280 WYL domain 151 196 5.1E-8 T 09-03-2017 IPR026881 WYL domain RG43_RS14140 a656f81e21bd955cd09a74e9d6759db3 14 Pfam PF08255 Trp-operon Leader Peptide 1 14 3.1E-9 T 09-03-2017 IPR013205 Leader peptide, tryptophan-operon RG43_RS02885 1ad7c1db457ce813648fdc34e68ce91f 375 Pfam PF06250 Protein of unknown function (DUF1016) 19 361 7.6E-111 T 09-03-2017 IPR009362 Protein of unknown function DUF1016 RG43_RS14585 6d8a606cdb29b9004bcb4aaf87d97475 326 Gene3D G3DSA:1.10.3470.10 4 325 6.2E-102 T 09-03-2017 IPR029022 ABC transporter, BtuC-like RG43_RS14585 6d8a606cdb29b9004bcb4aaf87d97475 326 Pfam PF01032 FecCD transport family 12 322 1.3E-88 T 09-03-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 RG43_RS14585 6d8a606cdb29b9004bcb4aaf87d97475 326 SUPERFAMILY SSF81345 6 322 1.96E-78 T 09-03-2017 IPR029022 ABC transporter, BtuC-like RG43_RS15245 077fe408028d99fdb2a43ea5f76506a7 402 Pfam PF07690 Major Facilitator Superfamily 20 239 8.2E-21 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS15245 077fe408028d99fdb2a43ea5f76506a7 402 Hamap MF_01529 Multidrug resistance protein MdtH [mdtH]. 1 401 42.504 T 09-03-2017 IPR022855 Multidrug resistance protein MdtH RG43_RS15245 077fe408028d99fdb2a43ea5f76506a7 402 SUPERFAMILY SSF103473 12 392 7.06E-51 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS15245 077fe408028d99fdb2a43ea5f76506a7 402 Gene3D G3DSA:1.20.1250.20 17 186 1.7E-25 T 09-03-2017 RG43_RS15245 077fe408028d99fdb2a43ea5f76506a7 402 Gene3D G3DSA:1.20.1250.20 206 386 1.7E-16 T 09-03-2017 RG43_RS11600 18c84affab4e9281a04cb2dbbfa97570 114 SUPERFAMILY SSF55298 5 114 1.57E-27 T 09-03-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RG43_RS11600 18c84affab4e9281a04cb2dbbfa97570 114 Gene3D G3DSA:3.30.1330.40 6 113 4.8E-21 T 09-03-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RG43_RS11600 18c84affab4e9281a04cb2dbbfa97570 114 Pfam PF01042 Endoribonuclease L-PSP 4 114 8.9E-29 T 09-03-2017 IPR006175 YjgF/YER057c/UK114 family RG43_RS11600 18c84affab4e9281a04cb2dbbfa97570 114 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 90 108 - T 09-03-2017 IPR019897 RidA, conserved site RG43_RS21635 bb1c5fbfc0c52104aa6c65e79abfea76 322 SUPERFAMILY SSF56784 109 316 2.4E-47 T 09-03-2017 IPR023214 HAD-like domain RG43_RS21635 bb1c5fbfc0c52104aa6c65e79abfea76 322 Gene3D G3DSA:1.10.150.210 126 175 1.3E-27 T 09-03-2017 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 RG43_RS21635 bb1c5fbfc0c52104aa6c65e79abfea76 322 Pfam PF12710 haloacid dehalogenase-like hydrolase 145 280 1.5E-18 T 09-03-2017 RG43_RS21635 bb1c5fbfc0c52104aa6c65e79abfea76 322 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 97 315 7.7E-94 T 09-03-2017 RG43_RS21635 bb1c5fbfc0c52104aa6c65e79abfea76 322 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 112 283 3.3E-26 T 09-03-2017 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 RG43_RS21635 bb1c5fbfc0c52104aa6c65e79abfea76 322 Gene3D G3DSA:3.40.50.1000 176 302 5.7E-40 T 09-03-2017 IPR023214 HAD-like domain RG43_RS10875 33fb3d053aad10fe4b94b1aac17a4bd1 74 Pfam PF10769 Protein of unknown function (DUF2594) 1 74 2.1E-36 T 09-03-2017 IPR019705 Protein of unknown function DUF2594 RG43_RS23605 6707a689e503a4449260eca1fc489c13 574 PIRSF PIRSF000719 1 574 2.0E-299 T 09-03-2017 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 RG43_RS23605 6707a689e503a4449260eca1fc489c13 574 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 1 570 43.554 T 09-03-2017 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 RG43_RS23605 6707a689e503a4449260eca1fc489c13 574 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 9 573 0.0 T 09-03-2017 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 RG43_RS23605 6707a689e503a4449260eca1fc489c13 574 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 9 566 2.3E-243 T 09-03-2017 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 RG43_RS09475 26a5164b46d0cc31bfa5592d1562efa2 253 Pfam PF13672 Protein phosphatase 2C 11 220 7.2E-41 T 09-03-2017 RG43_RS09475 26a5164b46d0cc31bfa5592d1562efa2 253 SUPERFAMILY SSF81606 10 188 2.62E-7 T 09-03-2017 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RG43_RS04825 5bec433519db322adcfd5845fa405433 179 Pfam PF00419 Fimbrial protein 27 178 3.1E-12 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS04825 5bec433519db322adcfd5845fa405433 179 SUPERFAMILY SSF49401 32 178 1.24E-30 T 09-03-2017 IPR008966 Adhesion domain RG43_RS04825 5bec433519db322adcfd5845fa405433 179 Gene3D G3DSA:2.60.40.1090 24 178 7.9E-36 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS18565 c0d6ea132e9884fe74c837ccbfcfcf4c 264 Pfam PF01963 TraB family 30 264 1.4E-41 T 09-03-2017 IPR002816 Pheromone shutdown, TraB RG43_RS16730 da9651dc099599f97114d25fc0619de8 150 Gene3D G3DSA:3.90.1170.40 4 150 1.3E-57 T 09-03-2017 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 RG43_RS16730 da9651dc099599f97114d25fc0619de8 150 SUPERFAMILY SSF54690 6 150 1.03E-54 T 09-03-2017 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 RG43_RS16730 da9651dc099599f97114d25fc0619de8 150 Pfam PF02391 MoaE protein 11 121 5.9E-37 T 09-03-2017 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 RG43_RS10000 8af844fc0ae761c6f4650851857d4738 112 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 41 87 2.2E-7 T 09-03-2017 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger RG43_RS05530 e4e4d25e7227fecd8c40dafdca4deac2 346 Pfam PF00248 Aldo/keto reductase family 16 337 2.7E-72 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain RG43_RS05530 e4e4d25e7227fecd8c40dafdca4deac2 346 Gene3D G3DSA:3.20.20.100 1 343 2.1E-105 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain RG43_RS05530 e4e4d25e7227fecd8c40dafdca4deac2 346 SUPERFAMILY SSF51430 1 344 1.03E-105 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain RG43_RS05530 e4e4d25e7227fecd8c40dafdca4deac2 346 PRINTS PR00069 Aldo-keto reductase signature 164 181 2.9E-8 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RG43_RS05530 e4e4d25e7227fecd8c40dafdca4deac2 346 PRINTS PR00069 Aldo-keto reductase signature 116 134 2.9E-8 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RG43_RS02020 5a33f0a6e962f8701aad114c9f1f2dd0 362 Gene3D G3DSA:3.40.50.1970 2 172 2.0E-67 T 09-03-2017 RG43_RS02020 5a33f0a6e962f8701aad114c9f1f2dd0 362 Gene3D G3DSA:1.20.1090.10 173 356 1.3E-67 T 09-03-2017 RG43_RS02020 5a33f0a6e962f8701aad114c9f1f2dd0 362 PIRSF PIRSF001455 10 360 3.1E-106 T 09-03-2017 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 RG43_RS02020 5a33f0a6e962f8701aad114c9f1f2dd0 362 SUPERFAMILY SSF56796 4 356 1.83E-117 T 09-03-2017 RG43_RS02020 5a33f0a6e962f8701aad114c9f1f2dd0 362 Pfam PF01761 3-dehydroquinate synthase 67 325 4.6E-109 T 09-03-2017 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 RG43_RS02020 5a33f0a6e962f8701aad114c9f1f2dd0 362 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 354 8.9E-123 T 09-03-2017 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 RG43_RS02020 5a33f0a6e962f8701aad114c9f1f2dd0 362 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 358 43.379 T 09-03-2017 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 RG43_RS22615 148d0d6b7ddf4ded906fb97e25bc7a36 133 Pfam PF09938 Uncharacterized protein conserved in bacteria (DUF2170) 3 131 9.5E-43 T 09-03-2017 IPR019231 Protein of unknown function DUF2170 RG43_RS09860 463ce64e4fd8967f36e6d133369ab9cb 53 Pfam PF06755 CbtA_toxin of type IV toxin-antitoxin system 1 53 1.7E-21 T 09-03-2017 IPR009610 CbtA toxin of type IV toxin-antitoxin system RG43_RS21805 82b0ee42f9e5f0df62aa4d3c94aa0410 763 SUPERFAMILY SSF53649 161 469 3.71E-31 T 09-03-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RG43_RS21805 82b0ee42f9e5f0df62aa4d3c94aa0410 763 Gene3D G3DSA:3.40.720.10 163 465 5.4E-24 T 09-03-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RG43_RS21805 82b0ee42f9e5f0df62aa4d3c94aa0410 763 Pfam PF00884 Sulfatase 163 446 2.6E-22 T 09-03-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RG43_RS21805 82b0ee42f9e5f0df62aa4d3c94aa0410 763 Hamap MF_01070 Phosphoglycerol transferase I [mdoB]. 6 738 54.324 T 09-03-2017 IPR020881 Phosphoglycerol transferase I GO:0005886|GO:0008960|GO:0009250 KEGG: 00561+2.7.8.20 RG43_RS05590 196c7b00ad2caa08ad7dd54c4b22958e 135 Pfam PF10713 Protein of unknown function (DUF2509) 15 132 1.8E-31 T 09-03-2017 IPR019652 Protein of unknown function DUF2509 RG43_RS12200 94908636efdf36c16faa3c2ed0674250 370 Pfam PF01594 Domain of unknown function DUF20 15 344 1.3E-65 T 09-03-2017 IPR002549 Transmembrane protein TqsA-like RG43_RS14315 fb1b9639248c5e7e67eb5002d66c86e0 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 1.3E-38 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS14315 fb1b9639248c5e7e67eb5002d66c86e0 306 SUPERFAMILY SSF161098 89 291 2.62E-21 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS14315 fb1b9639248c5e7e67eb5002d66c86e0 306 Gene3D G3DSA:1.10.3720.10 88 302 1.1E-20 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS22650 e278beff125ba074bf42aa845698b512 334 Pfam PF01145 SPFH domain / Band 7 family 22 243 1.2E-34 T 09-03-2017 IPR001107 Band 7 domain RG43_RS22650 e278beff125ba074bf42aa845698b512 334 TIGRFAM TIGR01932 hflC: HflC protein 1 327 2.5E-149 T 09-03-2017 IPR010200 HflC GO:0016021|GO:0052547 RG43_RS22650 e278beff125ba074bf42aa845698b512 334 PIRSF PIRSF005651 1 334 5.2E-111 T 09-03-2017 IPR010200 HflC GO:0016021|GO:0052547 RG43_RS22650 e278beff125ba074bf42aa845698b512 334 SMART SM00244 18 227 1.2E-47 T 09-03-2017 IPR001107 Band 7 domain RG43_RS22650 e278beff125ba074bf42aa845698b512 334 SUPERFAMILY SSF117892 56 157 9.81E-17 T 09-03-2017 IPR001107 Band 7 domain RG43_RS22650 e278beff125ba074bf42aa845698b512 334 SUPERFAMILY SSF117892 196 233 1.1E-7 T 09-03-2017 IPR001107 Band 7 domain RG43_RS08750 88b8a29504422d16088e1851e610d178 87 Pfam PF03927 NapD protein 5 81 6.6E-26 T 09-03-2017 IPR005623 Chaperone NapD, nitrate reductase assembly RG43_RS05220 c676d7a5e37881537273eca495577ba4 109 SUPERFAMILY SSF102829 6 94 1.01E-25 T 09-03-2017 IPR007838 Cell division protein ZapA-like RG43_RS05220 c676d7a5e37881537273eca495577ba4 109 Pfam PF05164 Cell division protein ZapA 6 90 4.2E-20 T 09-03-2017 IPR007838 Cell division protein ZapA-like RG43_RS05220 c676d7a5e37881537273eca495577ba4 109 Hamap MF_02012 Cell division protein ZapA [zapA]. 1 109 36.753 T 09-03-2017 IPR023771 Cell division protein ZapA, eubacteria RG43_RS11615 e6576568a181edce2027623873528bdc 193 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 6 189 2.7E-89 T 09-03-2017 IPR004658 Outer membrane lipoprotein Slp GO:0019867 RG43_RS11615 e6576568a181edce2027623873528bdc 193 PIRSF PIRSF004982 5 189 1.7E-58 T 09-03-2017 IPR004658 Outer membrane lipoprotein Slp GO:0019867 RG43_RS11615 e6576568a181edce2027623873528bdc 193 Pfam PF03843 Outer membrane lipoprotein Slp family 20 167 5.2E-49 T 09-03-2017 IPR004658 Outer membrane lipoprotein Slp GO:0019867 RG43_RS19380 d630de1eb493eac21dd19178eabbf3b2 323 Pfam PF02653 Branched-chain amino acid transport system / permease component 39 307 4.6E-37 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RG43_RS20830 57ee806edda4a526758dbb1ec09193bb 198 Gene3D G3DSA:2.60.40.1090 31 198 7.2E-10 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS20830 57ee806edda4a526758dbb1ec09193bb 198 Pfam PF00419 Fimbrial protein 35 197 3.5E-7 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS20830 57ee806edda4a526758dbb1ec09193bb 198 SUPERFAMILY SSF49401 31 198 5.47E-11 T 09-03-2017 IPR008966 Adhesion domain RG43_RS22660 75bda29793b86a71a35e27268d4416b6 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 5.4E-10 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 RG43_RS22660 75bda29793b86a71a35e27268d4416b6 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 5.4E-10 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 RG43_RS22660 75bda29793b86a71a35e27268d4416b6 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 5.4E-10 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 RG43_RS22660 75bda29793b86a71a35e27268d4416b6 426 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 2.2E-29 T 09-03-2017 IPR032305 GTP-binding protein, middle domain RG43_RS22660 75bda29793b86a71a35e27268d4416b6 426 SUPERFAMILY SSF52540 197 373 9.55E-41 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS22660 75bda29793b86a71a35e27268d4416b6 426 SUPERFAMILY SSF54980 365 422 4.03E-14 T 09-03-2017 IPR009022 Elongation factor G, III-V domain RG43_RS22660 75bda29793b86a71a35e27268d4416b6 426 Gene3D G3DSA:3.40.50.300 198 361 2.1E-36 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS22660 75bda29793b86a71a35e27268d4416b6 426 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 1.1E-30 T 09-03-2017 IPR025121 GTPase HflX, N-terminal RG43_RS22660 75bda29793b86a71a35e27268d4416b6 426 Pfam PF01926 50S ribosome-binding GTPase 200 318 1.6E-21 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 RG43_RS22660 75bda29793b86a71a35e27268d4416b6 426 Hamap MF_00900 GTPase HflX [hflX]. 27 390 47.461 T 09-03-2017 IPR016496 GTPase HflX GO:0005525 RG43_RS22660 75bda29793b86a71a35e27268d4416b6 426 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 5.7E-155 T 09-03-2017 IPR016496 GTPase HflX GO:0005525 RG43_RS22660 75bda29793b86a71a35e27268d4416b6 426 PIRSF PIRSF006809 3 419 6.8E-152 T 09-03-2017 IPR016496 GTPase HflX GO:0005525 RG43_RS24880 284a57a96fdd03e98f31a4cf130e6749 168 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 23 162 3.9E-21 T 09-03-2017 IPR009936 Protein of unknown function DUF1468 RG43_RS12500 b0bf1c00a7f4f56d422e41a7c2fb3a79 206 SMART SM00900 99 191 8.9E-37 T 09-03-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 RG43_RS12500 b0bf1c00a7f4f56d422e41a7c2fb3a79 206 Hamap MF_00479 Electron transport complex subunit RsxG [rsxG]. 2 193 26.82 T 09-03-2017 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 RG43_RS12500 b0bf1c00a7f4f56d422e41a7c2fb3a79 206 Pfam PF04205 FMN-binding domain 99 187 3.0E-19 T 09-03-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 RG43_RS12500 b0bf1c00a7f4f56d422e41a7c2fb3a79 206 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 192 1.5E-69 T 09-03-2017 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 RG43_RS12500 b0bf1c00a7f4f56d422e41a7c2fb3a79 206 PIRSF PIRSF006091 1 203 1.8E-70 T 09-03-2017 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 RG43_RS24495 52c3922725d5848c035a49e3073dae92 489 SUPERFAMILY SSF53067 251 472 2.78E-31 T 09-03-2017 RG43_RS24495 52c3922725d5848c035a49e3073dae92 489 Gene3D G3DSA:3.30.420.40 6 242 5.3E-29 T 09-03-2017 RG43_RS24495 52c3922725d5848c035a49e3073dae92 489 SUPERFAMILY SSF53067 7 245 3.88E-48 T 09-03-2017 RG43_RS24495 52c3922725d5848c035a49e3073dae92 489 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 7 243 1.7E-29 T 09-03-2017 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 RG43_RS24495 52c3922725d5848c035a49e3073dae92 489 Hamap MF_01535 Rhamnulokinase [rhaB]. 6 483 54.129 T 09-03-2017 IPR013449 Rhamnulokinase GO:0008993|GO:0019301 KEGG: 00040+2.7.1.5|KEGG: 00051+2.7.1.5 RG43_RS24495 52c3922725d5848c035a49e3073dae92 489 Gene3D G3DSA:3.30.420.40 363 470 6.6E-15 T 09-03-2017 RG43_RS24495 52c3922725d5848c035a49e3073dae92 489 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 253 439 8.4E-26 T 09-03-2017 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 RG43_RS24495 52c3922725d5848c035a49e3073dae92 489 TIGRFAM TIGR02627 rhamnulo_kin: rhamnulokinase 7 460 3.5E-242 T 09-03-2017 IPR013449 Rhamnulokinase GO:0008993|GO:0019301 KEGG: 00040+2.7.1.5|KEGG: 00051+2.7.1.5 RG43_RS18160 d1b0497e25c781e7e5c5ed0418dadfde 72 SUPERFAMILY SSF160582 3 70 1.29E-24 T 09-03-2017 RG43_RS18160 d1b0497e25c781e7e5c5ed0418dadfde 72 Pfam PF03621 MbtH-like protein 4 54 9.0E-22 T 09-03-2017 IPR005153 MbtH-like protein RG43_RS18160 d1b0497e25c781e7e5c5ed0418dadfde 72 Gene3D G3DSA:3.90.820.10 12 70 9.9E-24 T 09-03-2017 RG43_RS18160 d1b0497e25c781e7e5c5ed0418dadfde 72 SMART SM00923 5 55 3.4E-24 T 09-03-2017 IPR005153 MbtH-like protein RG43_RS03470 a13c3466ab65d56408638a9d2649c78a 127 Pfam PF13721 SecD export protein N-terminal TM region 17 104 5.6E-17 T 09-03-2017 IPR027398 SecD export protein N-terminal TM domain RG43_RS03470 a13c3466ab65d56408638a9d2649c78a 127 Hamap MF_00904 Modulator protein MzrA [mzrA]. 2 116 29.285 T 09-03-2017 IPR026574 Modulator protein MzrA RG43_RS15710 91ad9612c79c422cfefbc0a0bdedb9a3 132 Gene3D G3DSA:3.40.30.10 19 101 4.5E-32 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS15710 91ad9612c79c422cfefbc0a0bdedb9a3 132 Pfam PF07449 Hydrogenase-1 expression protein HyaE 10 116 4.7E-43 T 09-03-2017 IPR010893 [NiFe]-hydrogenase maturation factor HyaE RG43_RS15710 91ad9612c79c422cfefbc0a0bdedb9a3 132 SUPERFAMILY SSF52833 5 130 8.61E-25 T 09-03-2017 IPR012336 Thioredoxin-like fold RG43_RS20415 9be7b415b04d1907b4c11c401219dede 243 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 7 242 6.0E-96 T 09-03-2017 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS20415 9be7b415b04d1907b4c11c401219dede 243 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 6 225 6.8E-100 T 09-03-2017 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS20415 9be7b415b04d1907b4c11c401219dede 243 Pfam PF00929 Exonuclease 9 175 3.8E-42 T 09-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III RG43_RS20415 9be7b415b04d1907b4c11c401219dede 243 SMART SM00479 7 184 1.9E-51 T 09-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III RG43_RS20415 9be7b415b04d1907b4c11c401219dede 243 SUPERFAMILY SSF53098 7 184 1.48E-52 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS20415 9be7b415b04d1907b4c11c401219dede 243 Gene3D G3DSA:3.30.420.10 7 184 9.1E-65 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS20855 3eb2f2d4cee0ea3c37db911b60689c4d 306 Pfam PF04754 Putative transposase, YhgA-like 7 207 7.2E-84 T 09-03-2017 IPR006842 Transposase (putative), YhgA-like RG43_RS20855 3eb2f2d4cee0ea3c37db911b60689c4d 306 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 8 304 3.3E-81 T 09-03-2017 IPR010106 Conserved hypothetical protein CHP01784 RG43_RS09090 584bdb96907b43aa43984cdac808fcd3 239 Pfam PF02698 DUF218 domain 48 170 9.9E-18 T 09-03-2017 IPR003848 Domain of unknown function DUF218 RG43_RS09090 584bdb96907b43aa43984cdac808fcd3 239 PIRSF PIRSF005011 1 239 6.0E-157 T 09-03-2017 IPR023604 Uncharacterised protein family SanA RG43_RS09090 584bdb96907b43aa43984cdac808fcd3 239 Gene3D G3DSA:3.40.50.620 39 170 2.8E-8 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS21910 32de65d79bb7eea6105c51c1a248759a 112 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 20 71 8.1E-18 T 09-03-2017 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 RG43_RS21910 32de65d79bb7eea6105c51c1a248759a 112 Hamap MF_01193 Endoribonuclease SymE [symE]. 1 110 42.656 T 09-03-2017 IPR020883 Type I toxin-antitoxin system, SymE toxin GO:0003723|GO:0004521|GO:0005737|GO:0016070 RG43_RS23755 9f227a7d36199794d388f288a6ce768d 377 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 3 368 2.2E-160 T 09-03-2017 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 RG43_RS23755 9f227a7d36199794d388f288a6ce768d 377 Pfam PF04055 Radical SAM superfamily 82 220 5.0E-9 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 RG43_RS23755 9f227a7d36199794d388f288a6ce768d 377 SMART SM00876 258 361 2.8E-27 T 09-03-2017 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 RG43_RS23755 9f227a7d36199794d388f288a6ce768d 377 Gene3D G3DSA:3.20.20.70 36 361 6.9E-46 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS23755 9f227a7d36199794d388f288a6ce768d 377 SUPERFAMILY SSF102114 36 363 1.31E-52 T 09-03-2017 RG43_RS23755 9f227a7d36199794d388f288a6ce768d 377 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 258 360 7.2E-21 T 09-03-2017 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 RG43_RS02560 82bb7bfddeb061b42fd9f3ba4c08634d 184 SUPERFAMILY SSF51161 4 176 1.66E-45 T 09-03-2017 IPR011004 Trimeric LpxA-like RG43_RS02560 82bb7bfddeb061b42fd9f3ba4c08634d 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 47 3.7E-5 T 09-03-2017 IPR001451 Hexapeptide repeat RG43_RS02560 82bb7bfddeb061b42fd9f3ba4c08634d 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 130 1.4E-7 T 09-03-2017 IPR001451 Hexapeptide repeat RG43_RS02560 82bb7bfddeb061b42fd9f3ba4c08634d 184 Gene3D G3DSA:2.160.10.10 7 176 1.1E-44 T 09-03-2017 RG43_RS15725 4c28b0252b39f0f379b6771d9d32fe5b 597 Pfam PF00374 Nickel-dependent hydrogenase 54 582 5.9E-221 T 09-03-2017 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 RG43_RS15725 4c28b0252b39f0f379b6771d9d32fe5b 597 SUPERFAMILY SSF56762 12 582 9.81E-168 T 09-03-2017 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS15725 4c28b0252b39f0f379b6771d9d32fe5b 597 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 573 582 - T 09-03-2017 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 RG43_RS15725 4c28b0252b39f0f379b6771d9d32fe5b 597 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 54 79 - T 09-03-2017 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 RG43_RS15725 4c28b0252b39f0f379b6771d9d32fe5b 597 Gene3D G3DSA:1.10.645.10 15 582 7.7E-225 T 09-03-2017 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS16620 385697072c9438773ae1ce10a54ed398 86 SUPERFAMILY SSF159871 3 86 3.27E-23 T 09-03-2017 IPR010854 Domain of unknown function DUF1471 RG43_RS16620 385697072c9438773ae1ce10a54ed398 86 Pfam PF07338 Protein of unknown function (DUF1471) 34 86 8.3E-18 T 09-03-2017 IPR010854 Domain of unknown function DUF1471 RG43_RS16620 385697072c9438773ae1ce10a54ed398 86 Gene3D G3DSA:3.30.1660.10 19 86 3.3E-28 T 09-03-2017 IPR025543 Dodecin-like RG43_RS23740 de3739771bc636039f6bfd46eeb4f59d 251 Pfam PF00899 ThiF family 9 240 3.4E-66 T 09-03-2017 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RG43_RS23740 de3739771bc636039f6bfd46eeb4f59d 251 TIGRFAM TIGR02356 adenyl_thiF: thiazole biosynthesis adenylyltransferase ThiF 8 209 1.6E-87 T 09-03-2017 IPR012731 Thiazole biosynthesis adenylyltransferase ThiF KEGG: 00730+2.7.7.73|MetaCyc: PWY-6891|MetaCyc: PWY-6892 RG43_RS23740 de3739771bc636039f6bfd46eeb4f59d 251 SUPERFAMILY SSF69572 2 245 7.72E-82 T 09-03-2017 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RG43_RS23740 de3739771bc636039f6bfd46eeb4f59d 251 Gene3D G3DSA:3.40.50.720 3 244 1.9E-77 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS03180 1971518c0b60eea10dd207f1c646c830 292 Pfam PF01136 Peptidase family U32 92 201 3.4E-11 T 09-03-2017 IPR001539 Peptidase U32 GO:0006508|GO:0008233 RG43_RS21260 2b362a4ce29cdd7a9fda00debd41cee0 783 Gene3D G3DSA:3.90.1600.10 512 644 7.9E-11 T 09-03-2017 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS21260 2b362a4ce29cdd7a9fda00debd41cee0 783 Gene3D G3DSA:3.90.1600.10 400 431 7.9E-11 T 09-03-2017 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS21260 2b362a4ce29cdd7a9fda00debd41cee0 783 SMART SM00486 148 555 8.3E-85 T 09-03-2017 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS21260 2b362a4ce29cdd7a9fda00debd41cee0 783 Pfam PF00136 DNA polymerase family B 382 735 5.6E-42 T 09-03-2017 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS21260 2b362a4ce29cdd7a9fda00debd41cee0 783 Pfam PF03104 DNA polymerase family B, exonuclease domain 202 296 5.5E-7 T 09-03-2017 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS21260 2b362a4ce29cdd7a9fda00debd41cee0 783 Pfam PF03104 DNA polymerase family B, exonuclease domain 74 164 7.7E-5 T 09-03-2017 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS21260 2b362a4ce29cdd7a9fda00debd41cee0 783 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 415 428 7.0E-10 T 09-03-2017 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS21260 2b362a4ce29cdd7a9fda00debd41cee0 783 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 489 501 7.0E-10 T 09-03-2017 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS21260 2b362a4ce29cdd7a9fda00debd41cee0 783 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 541 549 7.0E-10 T 09-03-2017 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS21260 2b362a4ce29cdd7a9fda00debd41cee0 783 SUPERFAMILY SSF53098 3 389 1.84E-98 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS21260 2b362a4ce29cdd7a9fda00debd41cee0 783 ProSitePatterns PS00116 DNA polymerase family B signature. 543 551 - T 09-03-2017 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RG43_RS21260 2b362a4ce29cdd7a9fda00debd41cee0 783 SUPERFAMILY SSF56672 394 783 5.34E-116 T 09-03-2017 RG43_RS21260 2b362a4ce29cdd7a9fda00debd41cee0 783 Gene3D G3DSA:3.30.420.10 148 365 7.7E-37 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS18145 6c0adcbdff635d081352a623479fda12 271 SMART SM00382 32 229 7.4E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS18145 6c0adcbdff635d081352a623479fda12 271 Pfam PF00005 ABC transporter 24 171 4.5E-34 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS18145 6c0adcbdff635d081352a623479fda12 271 SUPERFAMILY SSF52540 8 233 1.36E-58 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS18145 6c0adcbdff635d081352a623479fda12 271 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS18145 6c0adcbdff635d081352a623479fda12 271 Gene3D G3DSA:3.40.50.300 8 241 7.1E-61 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS21595 69189ce92d7ad2bcdd017277d0fca935 108 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 10 101 1.0E-40 T 09-03-2017 IPR013335 Trp repressor, bacterial GO:0006355 RG43_RS21595 69189ce92d7ad2bcdd017277d0fca935 108 SUPERFAMILY SSF48295 5 105 7.85E-30 T 09-03-2017 IPR010921 Trp repressor/replication initiator GO:0043565 RG43_RS21595 69189ce92d7ad2bcdd017277d0fca935 108 Hamap MF_00475 Trp operon repressor [trpR]. 15 108 23.926 T 09-03-2017 IPR013335 Trp repressor, bacterial GO:0006355 RG43_RS21595 69189ce92d7ad2bcdd017277d0fca935 108 Gene3D G3DSA:1.10.1270.10 10 107 1.5E-46 T 09-03-2017 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 RG43_RS21595 69189ce92d7ad2bcdd017277d0fca935 108 PIRSF PIRSF003196 3 108 1.5E-40 T 09-03-2017 IPR013335 Trp repressor, bacterial GO:0006355 RG43_RS21595 69189ce92d7ad2bcdd017277d0fca935 108 TIGRFAM TIGR01321 TrpR: trp operon repressor 11 104 7.1E-43 T 09-03-2017 IPR013335 Trp repressor, bacterial GO:0006355 RG43_RS21595 69189ce92d7ad2bcdd017277d0fca935 108 Pfam PF01371 Trp repressor protein 17 102 2.1E-28 T 09-03-2017 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 RG43_RS20625 84bca4acacedfa88806f4c36cc4393d9 285 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 239 265 - T 09-03-2017 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981 RG43_RS20625 84bca4acacedfa88806f4c36cc4393d9 285 Pfam PF01148 Cytidylyltransferase family 4 278 4.9E-71 T 09-03-2017 RG43_RS01290 f52aff88fe8b06ac07e41a3429b6e6ff 112 Gene3D G3DSA:1.10.890.10 28 101 1.0E-8 T 09-03-2017 IPR010486 HNS-dependent expression A/B RG43_RS01290 f52aff88fe8b06ac07e41a3429b6e6ff 112 Pfam PF06411 HdeA/HdeB family 19 100 4.9E-24 T 09-03-2017 IPR010486 HNS-dependent expression A/B RG43_RS01290 f52aff88fe8b06ac07e41a3429b6e6ff 112 Hamap MF_00947 Acid stress chaperone HdeB [hdeB]. 6 107 26.215 T 09-03-2017 IPR028623 HNS-dependent expression B GO:0009268|GO:0051082 RG43_RS01290 f52aff88fe8b06ac07e41a3429b6e6ff 112 ProDom PD070929 HDEB PRECURSOR SIGNAL EXPORTED PERIPLASMIC SECRETED ECS4389 10K-L SEQUENCING DIRECT 5 112 2.0E-59 T 09-03-2017 RG43_RS23675 ee79050b526a10c0753707fba14fc37e 458 SMART SM00388 237 303 1.6E-15 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS23675 ee79050b526a10c0753707fba14fc37e 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 448 3.0E-20 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS23675 ee79050b526a10c0753707fba14fc37e 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 396 3.0E-20 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS23675 ee79050b526a10c0753707fba14fc37e 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 410 3.0E-20 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS23675 ee79050b526a10c0753707fba14fc37e 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 429 3.0E-20 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RG43_RS23675 ee79050b526a10c0753707fba14fc37e 458 Gene3D G3DSA:3.30.565.10 303 449 2.7E-46 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS23675 ee79050b526a10c0753707fba14fc37e 458 Pfam PF00512 His Kinase A (phospho-acceptor) domain 237 299 5.2E-13 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS23675 ee79050b526a10c0753707fba14fc37e 458 SMART SM00387 345 451 5.3E-37 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS23675 ee79050b526a10c0753707fba14fc37e 458 SUPERFAMILY SSF55874 293 450 1.15E-43 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS23675 ee79050b526a10c0753707fba14fc37e 458 SUPERFAMILY SSF47384 227 300 4.12E-13 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS23675 ee79050b526a10c0753707fba14fc37e 458 Gene3D G3DSA:1.10.287.130 231 298 2.6E-13 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RG43_RS23675 ee79050b526a10c0753707fba14fc37e 458 SUPERFAMILY SSF103190 34 155 3.92E-13 T 09-03-2017 IPR029151 Periplasmic sensor domain-like RG43_RS23675 ee79050b526a10c0753707fba14fc37e 458 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 450 2.4E-24 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain RG43_RS16365 3839bd4251019f1e78d7d23a20efa454 95 Pfam PF07214 Protein of unknown function (DUF1418) 1 92 1.2E-36 T 09-03-2017 IPR010815 Protein of unknown function DUF1418 RG43_RS17440 8a6549d15601021b4f9eeaaaf5c7b7ce 819 Pfam PF00577 Outer membrane usher protein 183 733 8.5E-189 T 09-03-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 RG43_RS17440 8a6549d15601021b4f9eeaaaf5c7b7ce 819 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 297 307 - T 09-03-2017 IPR018030 Fimbrial membrane usher, conserved site RG43_RS17440 8a6549d15601021b4f9eeaaaf5c7b7ce 819 Pfam PF13954 PapC N-terminal domain 26 165 1.1E-31 T 09-03-2017 IPR025885 PapC, N-terminal domain GO:0005515 RG43_RS17440 8a6549d15601021b4f9eeaaaf5c7b7ce 819 SUPERFAMILY SSF141729 24 141 1.83E-24 T 09-03-2017 RG43_RS17440 8a6549d15601021b4f9eeaaaf5c7b7ce 819 Pfam PF13953 PapC C-terminal domain 746 803 4.0E-13 T 09-03-2017 IPR025949 PapC-like, C-terminal domain RG43_RS07210 ea1ad55125463722651d11a381159a9c 206 Gene3D G3DSA:1.25.40.10 53 186 7.3E-5 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS07210 ea1ad55125463722651d11a381159a9c 206 SUPERFAMILY SSF48452 88 186 8.95E-6 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS07210 ea1ad55125463722651d11a381159a9c 206 PIRSF PIRSF006170 1 206 1.5E-59 T 09-03-2017 IPR026039 Uncharacterised protein family UPF0070 RG43_RS07210 ea1ad55125463722651d11a381159a9c 206 Pfam PF09976 Tetratricopeptide repeat-like domain 15 205 1.4E-55 T 09-03-2017 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038 RG43_RS23040 e47cce763e21edd95e6203294cf86f05 742 Gene3D G3DSA:3.40.50.300 69 169 9.4E-22 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS23040 e47cce763e21edd95e6203294cf86f05 742 Gene3D G3DSA:3.40.50.300 207 343 9.4E-22 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS23040 e47cce763e21edd95e6203294cf86f05 742 Pfam PF00350 Dynamin family 72 277 5.5E-18 T 09-03-2017 IPR022812 Dynamin superfamily RG43_RS23040 e47cce763e21edd95e6203294cf86f05 742 SUPERFAMILY SSF52540 207 350 2.3E-30 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS23040 e47cce763e21edd95e6203294cf86f05 742 SUPERFAMILY SSF52540 57 168 2.3E-30 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS26690 a4d316229e98e450ac6a4889404d4658 449 Pfam PF01943 Polysaccharide biosynthesis protein 19 280 3.8E-9 T 09-03-2017 IPR002797 Polysaccharide biosynthesis protein GO:0016020 RG43_RS04315 a4d316229e98e450ac6a4889404d4658 449 Pfam PF01943 Polysaccharide biosynthesis protein 19 280 3.8E-9 T 09-03-2017 IPR002797 Polysaccharide biosynthesis protein GO:0016020 RG43_RS07515 fb9eddd3274dacf307662c46599f1d49 408 Pfam PF04346 Ethanolamine utilisation protein, EutH 3 391 7.8E-142 T 09-03-2017 IPR007441 Ethanolamine utilisation protein EutH GO:0016021|GO:0034228|GO:0034229 RG43_RS07515 fb9eddd3274dacf307662c46599f1d49 408 PIRSF PIRSF019466 1 408 9.4E-129 T 09-03-2017 IPR007441 Ethanolamine utilisation protein EutH GO:0016021|GO:0034228|GO:0034229 RG43_RS03790 aa236448fb62fa4ccd19ea29cab6a2a9 125 Pfam PF06755 CbtA_toxin of type IV toxin-antitoxin system 1 112 5.4E-61 T 09-03-2017 IPR009610 CbtA toxin of type IV toxin-antitoxin system RG43_RS26165 aa236448fb62fa4ccd19ea29cab6a2a9 125 Pfam PF06755 CbtA_toxin of type IV toxin-antitoxin system 1 112 5.4E-61 T 09-03-2017 IPR009610 CbtA toxin of type IV toxin-antitoxin system RG43_RS06440 7366776f3790ebe26119d479341fb788 142 Pfam PF09335 SNARE associated Golgi protein 26 131 4.5E-10 T 09-03-2017 IPR032816 SNARE associated Golgi protein RG43_RS12645 ae6e54e544a70114c647c406d0160c9a 460 Pfam PF13520 Amino acid permease 5 442 1.3E-77 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RG43_RS12645 ae6e54e544a70114c647c406d0160c9a 460 PIRSF PIRSF006060 1 459 2.3E-43 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RG43_RS12645 ae6e54e544a70114c647c406d0160c9a 460 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 459 1.1E-184 T 09-03-2017 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 RG43_RS14590 38c03be6322ff493b7bc9cefe80d4af4 252 Gene3D G3DSA:3.40.50.300 3 233 3.0E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS14590 38c03be6322ff493b7bc9cefe80d4af4 252 Pfam PF00005 ABC transporter 19 167 3.2E-28 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS14590 38c03be6322ff493b7bc9cefe80d4af4 252 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS14590 38c03be6322ff493b7bc9cefe80d4af4 252 SMART SM00382 28 216 1.5E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS14590 38c03be6322ff493b7bc9cefe80d4af4 252 SUPERFAMILY SSF52540 3 228 4.91E-55 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS22845 2a3addc34b49f57f18668eb2040e7ef8 158 Pfam PF04186 FxsA cytoplasmic membrane protein 8 109 2.7E-33 T 09-03-2017 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 RG43_RS18480 057c039d5e1ce6bca6144cf710d89113 259 TIGRFAM TIGR00245 TIGR00245: TIGR00245 family protein 6 251 1.6E-115 T 09-03-2017 IPR005226 UPF0014 family RG43_RS18480 057c039d5e1ce6bca6144cf710d89113 259 Pfam PF03649 Uncharacterised protein family (UPF0014) 10 245 9.9E-83 T 09-03-2017 IPR005226 UPF0014 family RG43_RS18230 7ef28bda546d322595f6ca023cb98f2f 458 ProSitePatterns PS00218 Amino acid permeases signature. 52 82 - T 09-03-2017 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 RG43_RS18230 7ef28bda546d322595f6ca023cb98f2f 458 PIRSF PIRSF006060 4 457 1.6E-77 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RG43_RS18230 7ef28bda546d322595f6ca023cb98f2f 458 Pfam PF00324 Amino acid permease 27 452 6.0E-119 T 09-03-2017 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 RG43_RS26040 d0371444ef3ade38e702f8639e97f245 285 Pfam PF02387 IncFII RepA protein family 12 264 2.8E-36 T 09-03-2017 IPR003446 Plasmid replication initiation, RepA GO:0006276 RG43_RS26040 d0371444ef3ade38e702f8639e97f245 285 TIGRFAM TIGR03474 incFII_RepA: incFII family plasmid replication initiator RepA 9 283 6.4E-177 T 09-03-2017 IPR017837 Plasmid replication initiator, RepA, IncFII type RG43_RS07850 65efc5a2a42861bdcd0d64632b48ed01 412 SUPERFAMILY SSF53383 10 394 1.36E-107 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase RG43_RS07850 65efc5a2a42861bdcd0d64632b48ed01 412 Gene3D G3DSA:3.90.1150.10 264 395 9.1E-45 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RG43_RS07850 65efc5a2a42861bdcd0d64632b48ed01 412 Pfam PF00155 Aminotransferase class I and II 37 376 1.7E-60 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RG43_RS07850 65efc5a2a42861bdcd0d64632b48ed01 412 Gene3D G3DSA:3.40.640.10 50 263 3.0E-62 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RG43_RS24865 4647c02703205a27989f08031d33718e 334 Pfam PF05035 2-keto-3-deoxy-galactonokinase 11 316 5.6E-93 T 09-03-2017 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130 RG43_RS10710 06fc43f4d8fe0d35237de79ebe9ef69b 154 Pfam PF03748 Flagellar basal body-associated protein FliL 56 152 6.5E-20 T 09-03-2017 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 RG43_RS10845 3c81a53f841cc96a743920d59cac0f99 183 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 90 164 9.5E-13 T 09-03-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RG43_RS10845 3c81a53f841cc96a743920d59cac0f99 183 TIGRFAM TIGR03823 FliZ: flagellar regulatory protein FliZ 1 167 1.1E-90 T 09-03-2017 IPR022523 Flagellar regulator, FliZ RG43_RS17330 276909bad11653f10573295b1f373216 230 Pfam PF01618 MotA/TolQ/ExbB proton channel family 78 207 5.6E-42 T 09-03-2017 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 RG43_RS17330 276909bad11653f10573295b1f373216 230 TIGRFAM TIGR02796 tolQ: protein TolQ 5 219 8.3E-94 T 09-03-2017 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 RG43_RS22875 2011b7c4f1dbd8061b20fa1f234b9bbd 191 SUPERFAMILY SSF48498 74 179 7.63E-6 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RG43_RS22875 2011b7c4f1dbd8061b20fa1f234b9bbd 191 Gene3D G3DSA:1.10.357.10 2 179 1.7E-17 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RG43_RS22875 2011b7c4f1dbd8061b20fa1f234b9bbd 191 SUPERFAMILY SSF46689 3 69 9.75E-8 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS10460 22e722e25211b0746f9eef2ee7706766 149 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 13 110 3.3E-11 T 09-03-2017 IPR010064 Bacteriophage HK97-gp10, putative tail-component RG43_RS10460 22e722e25211b0746f9eef2ee7706766 149 TIGRFAM TIGR01725 phge_HK97_gp10: phage protein, HK97 gp10 family 8 144 9.9E-25 T 09-03-2017 IPR010064 Bacteriophage HK97-gp10, putative tail-component RG43_RS15575 24506ee215bd4c87265d0ee7c10fe482 390 Gene3D G3DSA:1.10.3820.10 328 333 1.6E-29 T 09-03-2017 RG43_RS15575 24506ee215bd4c87265d0ee7c10fe482 390 Gene3D G3DSA:1.10.3820.10 10 185 1.6E-29 T 09-03-2017 RG43_RS15575 24506ee215bd4c87265d0ee7c10fe482 390 PIRSF PIRSF000014 1 383 7.5E-184 T 09-03-2017 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 RG43_RS15575 24506ee215bd4c87265d0ee7c10fe482 390 SUPERFAMILY SSF48695 8 185 2.84E-52 T 09-03-2017 IPR011031 Multihaem cytochrome RG43_RS15575 24506ee215bd4c87265d0ee7c10fe482 390 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 11 184 9.9E-68 T 09-03-2017 IPR005126 NapC/NirT cytochrome c, N-terminal RG43_RS15575 24506ee215bd4c87265d0ee7c10fe482 390 TIGRFAM TIGR02162 torC: trimethylamine-N-oxide reductase c-type cytochrome TorC 2 383 1.0E-198 T 09-03-2017 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 RG43_RS18380 9c3e408728d13faf720505bbb6c9c76c 349 TIGRFAM TIGR03175 AllD: ureidoglycolate dehydrogenase 1 349 6.4E-199 T 09-03-2017 IPR017590 Ureidoglycolate dehydrogenase KEGG: 00062+1.1.1.35|KEGG: 00071+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00230+1.1.1.350|KEGG: 00280+1.1.1.35|KEGG: 00281+1.1.1.35|KEGG: 00310+1.1.1.35|KEGG: 00362+1.1.1.35|KEGG: 00380+1.1.1.35|KEGG: 00623+1.1.1.35|KEGG: 00650+1.1.1.35|KEGG: 00720+1.1.1.35|KEGG: 00930+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5136|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401 RG43_RS18380 9c3e408728d13faf720505bbb6c9c76c 349 Pfam PF02615 Malate/L-lactate dehydrogenase 3 331 5.9E-112 T 09-03-2017 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 RG43_RS18380 9c3e408728d13faf720505bbb6c9c76c 349 SUPERFAMILY SSF89733 1 334 3.01E-110 T 09-03-2017 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 RG43_RS18380 9c3e408728d13faf720505bbb6c9c76c 349 Gene3D G3DSA:1.10.1530.10 1 71 1.2E-27 T 09-03-2017 RG43_RS18380 9c3e408728d13faf720505bbb6c9c76c 349 Gene3D G3DSA:3.30.1370.60 72 271 1.0E-77 T 09-03-2017 RG43_RS00570 985fde8487a8bb6835262a838502e2ff 352 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 78 326 5.3E-67 T 09-03-2017 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 RG43_RS00570 985fde8487a8bb6835262a838502e2ff 352 Gene3D G3DSA:3.40.50.2000 171 343 2.4E-49 T 09-03-2017 RG43_RS00570 985fde8487a8bb6835262a838502e2ff 352 SUPERFAMILY SSF53756 6 344 3.45E-81 T 09-03-2017 RG43_RS00570 985fde8487a8bb6835262a838502e2ff 352 Gene3D G3DSA:3.40.50.2000 6 154 1.1E-38 T 09-03-2017 RG43_RS00570 985fde8487a8bb6835262a838502e2ff 352 TIGRFAM TIGR02201 heptsyl_trn_III: putative lipopolysaccharide heptosyltransferase III 7 344 1.0E-184 T 09-03-2017 IPR011916 Lipopolysaccharide heptosyltransferase III, putative RG43_RS12410 aa95156cb70aa9fbf9994f3b75a21492 125 Pfam PF06945 Protein of unknown function (DUF1289) 58 103 5.9E-19 T 09-03-2017 IPR010710 Protein of unknown function DUF1289 RG43_RS11815 a4f2835ffa56d9592c74e5bc16b81292 90 Pfam PF07383 Protein of unknown function (DUF1496) 34 89 3.0E-24 T 09-03-2017 IPR009971 Protein of unknown function DUF1496 RG43_RS01525 84f1e1d60a5122be1bc20de7c4fada6a 405 Pfam PF07690 Major Facilitator Superfamily 25 305 8.9E-15 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS01525 84f1e1d60a5122be1bc20de7c4fada6a 405 Hamap MF_01118 UPF0226 membrane protein . 3 394 29.619 T 09-03-2017 IPR023008 Uncharacterised protein family UPF0226, major facilitator superfamily RG43_RS01525 84f1e1d60a5122be1bc20de7c4fada6a 405 Gene3D G3DSA:1.20.1250.20 219 397 3.6E-19 T 09-03-2017 RG43_RS01525 84f1e1d60a5122be1bc20de7c4fada6a 405 Gene3D G3DSA:1.20.1250.20 18 199 1.7E-18 T 09-03-2017 RG43_RS01525 84f1e1d60a5122be1bc20de7c4fada6a 405 SUPERFAMILY SSF103473 17 395 5.89E-48 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS18445 4c10ac69e9a62c3f7af497b34d7c836f 364 Gene3D G3DSA:3.40.250.10 11 131 2.3E-32 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS18445 4c10ac69e9a62c3f7af497b34d7c836f 364 SUPERFAMILY SSF52821 9 66 9.6E-20 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS18445 4c10ac69e9a62c3f7af497b34d7c836f 364 SUPERFAMILY SSF52821 94 134 9.6E-20 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS18445 4c10ac69e9a62c3f7af497b34d7c836f 364 Hamap MF_01622 tRNA 2-selenouridine synthase [selU]. 3 364 49.565 T 09-03-2017 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 RG43_RS18445 4c10ac69e9a62c3f7af497b34d7c836f 364 SMART SM00450 4 134 1.9E-14 T 09-03-2017 IPR001763 Rhodanese-like domain RG43_RS18445 4c10ac69e9a62c3f7af497b34d7c836f 364 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 17 349 4.4E-106 T 09-03-2017 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 RG43_RS04360 49f00157ca3dee981573e7f08a4f786d 380 SUPERFAMILY SSF55729 145 377 1.29E-25 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS04360 49f00157ca3dee981573e7f08a4f786d 380 SUPERFAMILY SSF55729 9 117 1.29E-25 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS04360 49f00157ca3dee981573e7f08a4f786d 380 Gene3D G3DSA:3.40.630.30 212 374 1.4E-5 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS26735 49f00157ca3dee981573e7f08a4f786d 380 SUPERFAMILY SSF55729 145 377 1.29E-25 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS26735 49f00157ca3dee981573e7f08a4f786d 380 SUPERFAMILY SSF55729 9 117 1.29E-25 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS26735 49f00157ca3dee981573e7f08a4f786d 380 Gene3D G3DSA:3.40.630.30 212 374 1.4E-5 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS01445 ae4b034ed0a581ed381766aaa850d114 397 Gene3D G3DSA:2.40.30.10 188 269 2.4E-29 T 09-03-2017 RG43_RS01445 ae4b034ed0a581ed381766aaa850d114 397 Gene3D G3DSA:3.50.50.60 3 186 6.7E-53 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS01445 ae4b034ed0a581ed381766aaa850d114 397 Gene3D G3DSA:3.50.50.60 339 394 6.7E-53 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS01445 ae4b034ed0a581ed381766aaa850d114 397 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 392 1.1E-128 T 09-03-2017 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like RG43_RS01445 ae4b034ed0a581ed381766aaa850d114 397 SUPERFAMILY SSF51905 337 394 3.63E-59 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS01445 ae4b034ed0a581ed381766aaa850d114 397 SUPERFAMILY SSF51905 3 188 3.63E-59 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS01445 ae4b034ed0a581ed381766aaa850d114 397 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 347 369 6.3E-5 T 09-03-2017 RG43_RS01445 ae4b034ed0a581ed381766aaa850d114 397 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 6.3E-5 T 09-03-2017 RG43_RS01445 ae4b034ed0a581ed381766aaa850d114 397 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 6.3E-5 T 09-03-2017 RG43_RS01445 ae4b034ed0a581ed381766aaa850d114 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 164 7.4E-7 T 09-03-2017 RG43_RS01445 ae4b034ed0a581ed381766aaa850d114 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 362 369 7.4E-7 T 09-03-2017 RG43_RS01445 ae4b034ed0a581ed381766aaa850d114 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 7.4E-7 T 09-03-2017 RG43_RS01445 ae4b034ed0a581ed381766aaa850d114 397 Gene3D G3DSA:1.10.8.260 270 322 3.5E-25 T 09-03-2017 IPR023166 HI0933 insert-like domain RG43_RS01445 ae4b034ed0a581ed381766aaa850d114 397 SUPERFAMILY SSF160996 190 338 6.28E-43 T 09-03-2017 RG43_RS01445 ae4b034ed0a581ed381766aaa850d114 397 Pfam PF03486 HI0933-like protein 5 392 2.4E-156 T 09-03-2017 RG43_RS03490 362ca19ec97b6ac525bd34a13e2a82da 470 SUPERFAMILY SSF51556 3 465 1.77E-184 T 09-03-2017 IPR032466 Metal-dependent hydrolase RG43_RS03490 362ca19ec97b6ac525bd34a13e2a82da 470 Pfam PF02614 Glucuronate isomerase 1 465 2.1E-230 T 09-03-2017 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 RG43_RS03490 362ca19ec97b6ac525bd34a13e2a82da 470 Gene3D G3DSA:1.10.2020.10 46 137 3.1E-44 T 09-03-2017 IPR023177 Uronate isomerase, domain 2 GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 RG43_RS03490 362ca19ec97b6ac525bd34a13e2a82da 470 Gene3D G3DSA:3.20.20.140 4 44 4.4E-166 T 09-03-2017 RG43_RS03490 362ca19ec97b6ac525bd34a13e2a82da 470 Gene3D G3DSA:3.20.20.140 139 466 4.4E-166 T 09-03-2017 RG43_RS03490 362ca19ec97b6ac525bd34a13e2a82da 470 Hamap MF_00675 Uronate isomerase [uxaC]. 2 467 50.676 T 09-03-2017 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 RG43_RS25875 52598faca2c78c6c625195ce4821eb19 307 SUPERFAMILY SSF103481 191 296 2.48E-13 T 09-03-2017 RG43_RS25875 52598faca2c78c6c625195ce4821eb19 307 Pfam PF00892 EamA-like transporter family 6 145 7.4E-21 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 RG43_RS25875 52598faca2c78c6c625195ce4821eb19 307 Pfam PF00892 EamA-like transporter family 158 290 1.5E-21 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 RG43_RS25875 52598faca2c78c6c625195ce4821eb19 307 SUPERFAMILY SSF103481 43 148 9.68E-7 T 09-03-2017 RG43_RS25875 52598faca2c78c6c625195ce4821eb19 307 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 18 287 2.6E-78 T 09-03-2017 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 RG43_RS22470 edc2667f43ae712c6c60221fac6f727d 258 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 102 122 - T 09-03-2017 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 RG43_RS22470 edc2667f43ae712c6c60221fac6f727d 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 257 3.9E-45 T 09-03-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RG43_RS22470 edc2667f43ae712c6c60221fac6f727d 258 SUPERFAMILY SSF52096 1 256 3.82E-62 T 09-03-2017 IPR029045 ClpP/crotonase-like domain RG43_RS22470 edc2667f43ae712c6c60221fac6f727d 258 Gene3D G3DSA:3.90.226.10 2 250 6.9E-63 T 09-03-2017 IPR029045 ClpP/crotonase-like domain RG43_RS25565 2d0dd3c098c4925b54388511c8e7e200 157 ProDom PD092472 YIEI MEMBRANE INNER TRANSMEMBRANE 1 146 2.0E-60 T 09-03-2017 IPR020222 Inner membrane CbrB GO:0016021 RG43_RS15775 01f69ff97eb2baf3793e4041dd5e9dfe 220 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 22 213 1.5E-46 T 09-03-2017 IPR018635 Uncharacterised protein family UPF0319 RG43_RS15775 01f69ff97eb2baf3793e4041dd5e9dfe 220 Hamap MF_00789 UPF0319 protein YccT [yccT]. 3 216 25.771 T 09-03-2017 IPR018635 Uncharacterised protein family UPF0319 RG43_RS19530 67541068c570585d52a2d0c5577b66e5 239 Pfam PF02754 Cysteine-rich domain 133 216 3.1E-14 T 09-03-2017 IPR004017 Cysteine-rich domain RG43_RS19530 67541068c570585d52a2d0c5577b66e5 239 Pfam PF02754 Cysteine-rich domain 3 84 2.8E-13 T 09-03-2017 IPR004017 Cysteine-rich domain RG43_RS24620 ba50c6d634825c83b8e72e7442eb0cf7 295 Hamap MF_01912 Sulfofructosephosphate aldolase. 5 295 68.442 T 09-03-2017 IPR017291 Sulfofructosephosphate aldolase, YihT GO:0061595|GO:1902777 MetaCyc: PWY-7446 RG43_RS24620 ba50c6d634825c83b8e72e7442eb0cf7 295 Pfam PF01791 DeoC/LacD family aldolase 21 261 2.3E-46 T 09-03-2017 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-71336 RG43_RS24620 ba50c6d634825c83b8e72e7442eb0cf7 295 PIRSF PIRSF037840 1 295 2.1E-140 T 09-03-2017 IPR017291 Sulfofructosephosphate aldolase, YihT GO:0061595|GO:1902777 MetaCyc: PWY-7446 RG43_RS24620 ba50c6d634825c83b8e72e7442eb0cf7 295 SUPERFAMILY SSF51569 9 290 9.16E-60 T 09-03-2017 RG43_RS24620 ba50c6d634825c83b8e72e7442eb0cf7 295 SMART SM01133 20 262 9.3E-7 T 09-03-2017 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-71336 RG43_RS24620 ba50c6d634825c83b8e72e7442eb0cf7 295 Gene3D G3DSA:3.20.20.70 9 292 8.2E-93 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS23010 9a7411f922f121dd171ab61c902714c4 547 Gene3D G3DSA:3.40.720.10 239 532 7.6E-16 T 09-03-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RG43_RS23010 9a7411f922f121dd171ab61c902714c4 547 SUPERFAMILY SSF53649 239 531 1.61E-20 T 09-03-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RG43_RS23010 9a7411f922f121dd171ab61c902714c4 547 Pfam PF08019 Domain of unknown function (DUF1705) 59 209 3.0E-43 T 09-03-2017 IPR012549 Domain of unknown function DUF1705 GO:0016021 RG43_RS23010 9a7411f922f121dd171ab61c902714c4 547 Pfam PF00884 Sulfatase 238 527 5.7E-54 T 09-03-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RG43_RS04220 ea52332cb2bb7fff6c16aee08c7f9baf 164 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 1 163 5.0E-81 T 09-03-2017 IPR020761 Uncharacterised protein family UPF0114, bacteria RG43_RS04220 ea52332cb2bb7fff6c16aee08c7f9baf 164 Pfam PF03350 Uncharacterized protein family, UPF0114 9 125 1.3E-35 T 09-03-2017 IPR005134 Uncharacterised protein family UPF0114 RG43_RS04220 ea52332cb2bb7fff6c16aee08c7f9baf 164 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 164 92.813 T 09-03-2017 IPR020765 Uncharacterised protein family UPF0114, gammaproteobacteria GO:0005886 RG43_RS26595 ea52332cb2bb7fff6c16aee08c7f9baf 164 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 1 163 5.0E-81 T 09-03-2017 IPR020761 Uncharacterised protein family UPF0114, bacteria RG43_RS26595 ea52332cb2bb7fff6c16aee08c7f9baf 164 Pfam PF03350 Uncharacterized protein family, UPF0114 9 125 1.3E-35 T 09-03-2017 IPR005134 Uncharacterised protein family UPF0114 RG43_RS26595 ea52332cb2bb7fff6c16aee08c7f9baf 164 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 164 92.813 T 09-03-2017 IPR020765 Uncharacterised protein family UPF0114, gammaproteobacteria GO:0005886 RG43_RS05820 05793d33afddf98c3a809ef19fa95319 140 SUPERFAMILY SSF102546 1 139 1.96E-38 T 09-03-2017 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 RG43_RS05820 05793d33afddf98c3a809ef19fa95319 140 Hamap MF_01662 L-fucose mutarotase [fucU]. 1 140 48.785 T 09-03-2017 IPR023751 L-fucose mutarotase GO:0016854|GO:0042354|GO:0042806 RG43_RS05820 05793d33afddf98c3a809ef19fa95319 140 Gene3D G3DSA:3.40.1650.10 1 139 8.4E-50 T 09-03-2017 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 RG43_RS05820 05793d33afddf98c3a809ef19fa95319 140 Pfam PF05025 RbsD / FucU transport protein family 4 139 9.6E-35 T 09-03-2017 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 RG43_RS01695 8764c6534c1abc2a261016377766a1a2 231 Gene3D G3DSA:2.60.120.10 4 230 4.7E-72 T 09-03-2017 IPR014710 RmlC-like jelly roll fold RG43_RS01695 8764c6534c1abc2a261016377766a1a2 231 Pfam PF02678 Pirin 7 119 9.8E-38 T 09-03-2017 IPR003829 Pirin, N-terminal domain RG43_RS01695 8764c6534c1abc2a261016377766a1a2 231 SUPERFAMILY SSF51182 1 231 2.0E-80 T 09-03-2017 IPR011051 RmlC-like cupin domain RG43_RS01695 8764c6534c1abc2a261016377766a1a2 231 PIRSF PIRSF006232 1 230 6.7E-58 T 09-03-2017 IPR012093 Pirin RG43_RS15540 0deac7eed1b56ac93421d54513714945 198 Gene3D G3DSA:3.40.50.360 1 197 6.6E-74 T 09-03-2017 IPR029039 Flavoprotein-like domain RG43_RS15540 0deac7eed1b56ac93421d54513714945 198 Pfam PF03358 NADPH-dependent FMN reductase 13 143 4.1E-14 T 09-03-2017 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 RG43_RS15540 0deac7eed1b56ac93421d54513714945 198 Hamap MF_01017 NAD(P)H dehydrogenase (quinone). 1 198 41.307 T 09-03-2017 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 RG43_RS15540 0deac7eed1b56ac93421d54513714945 198 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 2 196 7.9E-106 T 09-03-2017 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 RG43_RS15540 0deac7eed1b56ac93421d54513714945 198 SUPERFAMILY SSF52218 1 197 1.3E-62 T 09-03-2017 IPR029039 Flavoprotein-like domain RG43_RS12180 3955d7c41b238870358dc43d561961d2 421 Gene3D G3DSA:1.20.1250.20 218 388 4.2E-13 T 09-03-2017 RG43_RS12180 3955d7c41b238870358dc43d561961d2 421 Pfam PF07690 Major Facilitator Superfamily 18 356 3.2E-29 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS12180 3955d7c41b238870358dc43d561961d2 421 Gene3D G3DSA:1.20.1250.20 14 185 5.4E-17 T 09-03-2017 RG43_RS12180 3955d7c41b238870358dc43d561961d2 421 SUPERFAMILY SSF103473 8 391 6.67E-41 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS14880 e1b8335e889f3d766c1763a26aadf02c 373 Pfam PF08007 Cupin superfamily protein 10 310 1.6E-104 T 09-03-2017 IPR003347 JmjC domain RG43_RS14880 e1b8335e889f3d766c1763a26aadf02c 373 Gene3D G3DSA:2.60.120.650 7 206 7.0E-45 T 09-03-2017 RG43_RS14880 e1b8335e889f3d766c1763a26aadf02c 373 SMART SM00558 92 215 2.1E-11 T 09-03-2017 IPR003347 JmjC domain RG43_RS14880 e1b8335e889f3d766c1763a26aadf02c 373 SUPERFAMILY SSF51197 7 292 2.47E-75 T 09-03-2017 RG43_RS00275 9ed2f1480fab05224f5ceb3307018801 447 SUPERFAMILY SSF63829 91 113 3.4E-7 T 09-03-2017 RG43_RS00275 9ed2f1480fab05224f5ceb3307018801 447 SUPERFAMILY SSF63829 145 210 3.4E-7 T 09-03-2017 RG43_RS00275 9ed2f1480fab05224f5ceb3307018801 447 SUPERFAMILY SSF63829 242 298 3.4E-7 T 09-03-2017 RG43_RS00275 9ed2f1480fab05224f5ceb3307018801 447 Pfam PF13449 Esterase-like activity of phytase 90 421 1.8E-68 T 09-03-2017 IPR027372 Phytase-like domain RG43_RS16450 9a030defdbd89c527f24c494d2f54a80 109 Pfam PF01381 Helix-turn-helix 53 94 4.0E-9 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RG43_RS16450 9a030defdbd89c527f24c494d2f54a80 109 SUPERFAMILY SSF47413 47 96 4.56E-11 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS16450 9a030defdbd89c527f24c494d2f54a80 109 SMART SM00530 52 106 4.3E-8 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RG43_RS16450 9a030defdbd89c527f24c494d2f54a80 109 Gene3D G3DSA:1.10.260.40 47 96 1.2E-13 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS20380 019abcfaff2e8990246110d0c46d9a49 116 Pfam PF05717 IS66 Orf2 like protein 9 106 2.1E-36 T 09-03-2017 IPR008878 Transposase IS66, Orf2 RG43_RS16550 bbc8b7aabc578d7ef28caed7ea398ddd 372 Pfam PF03600 Citrate transporter 25 304 3.2E-25 T 09-03-2017 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 RG43_RS12595 a58503dcc86b4b1f96f491f257dfa861 421 Pfam PF03573 outer membrane porin, OprD family 39 384 6.6E-6 T 09-03-2017 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 RG43_RS12595 a58503dcc86b4b1f96f491f257dfa861 421 Gene3D G3DSA:2.40.160.10 36 342 8.2E-17 T 09-03-2017 IPR023614 Porin domain RG43_RS09200 354ab63b41dba23df9aec162e9e69519 156 Pfam PF07308 Protein of unknown function (DUF1456) 86 150 1.1E-20 T 09-03-2017 IPR009921 Domain of unknown function DUF1456 RG43_RS09200 354ab63b41dba23df9aec162e9e69519 156 Pfam PF07308 Protein of unknown function (DUF1456) 4 70 2.2E-25 T 09-03-2017 IPR009921 Domain of unknown function DUF1456 RG43_RS20925 4fc1f159199ab6fff0594d5a308ddcdd 288 Pfam PF01564 Spermine/spermidine synthase 7 239 1.8E-88 T 09-03-2017 RG43_RS20925 4fc1f159199ab6fff0594d5a308ddcdd 288 Gene3D G3DSA:3.40.50.150 57 284 1.5E-83 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS20925 4fc1f159199ab6fff0594d5a308ddcdd 288 TIGRFAM TIGR00417 speE: spermidine synthase 7 278 2.6E-125 T 09-03-2017 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 RG43_RS20925 4fc1f159199ab6fff0594d5a308ddcdd 288 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 6 284 39.156 T 09-03-2017 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 RG43_RS20925 4fc1f159199ab6fff0594d5a308ddcdd 288 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 81 94 - T 09-03-2017 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 RG43_RS20925 4fc1f159199ab6fff0594d5a308ddcdd 288 Gene3D G3DSA:2.30.140.10 7 56 2.7E-20 T 09-03-2017 RG43_RS20925 4fc1f159199ab6fff0594d5a308ddcdd 288 SUPERFAMILY SSF53335 7 283 6.61E-89 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS17915 67e71e11a5d766dba6838af555ed17d3 403 SMART SM00936 292 383 1.8E-33 T 09-03-2017 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RG43_RS17915 67e71e11a5d766dba6838af555ed17d3 403 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 292 383 2.5E-24 T 09-03-2017 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RG43_RS17915 67e71e11a5d766dba6838af555ed17d3 403 Gene3D G3DSA:3.40.710.10 37 290 1.1E-91 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like RG43_RS17915 67e71e11a5d766dba6838af555ed17d3 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 72 83 5.7E-17 T 09-03-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RG43_RS17915 67e71e11a5d766dba6838af555ed17d3 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 131 148 5.7E-17 T 09-03-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RG43_RS17915 67e71e11a5d766dba6838af555ed17d3 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 158 171 5.7E-17 T 09-03-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RG43_RS17915 67e71e11a5d766dba6838af555ed17d3 403 SUPERFAMILY SSF69189 292 385 7.85E-25 T 09-03-2017 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RG43_RS17915 67e71e11a5d766dba6838af555ed17d3 403 Gene3D G3DSA:2.60.410.10 292 383 4.0E-32 T 09-03-2017 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RG43_RS17915 67e71e11a5d766dba6838af555ed17d3 403 SUPERFAMILY SSF56601 10 292 6.71E-76 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like RG43_RS17915 67e71e11a5d766dba6838af555ed17d3 403 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 39 272 2.3E-101 T 09-03-2017 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 RG43_RS13655 2ce28f8d2c735cd6eef7ac6b1d1e1ef8 144 Pfam PF00582 Universal stress protein family 1 144 6.6E-30 T 09-03-2017 IPR006016 UspA GO:0006950 RG43_RS13655 2ce28f8d2c735cd6eef7ac6b1d1e1ef8 144 SUPERFAMILY SSF52402 3 144 5.11E-31 T 09-03-2017 RG43_RS13655 2ce28f8d2c735cd6eef7ac6b1d1e1ef8 144 Gene3D G3DSA:3.40.50.620 3 144 5.4E-35 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS13655 2ce28f8d2c735cd6eef7ac6b1d1e1ef8 144 PRINTS PR01438 Universal stress protein signature 105 117 7.3E-9 T 09-03-2017 IPR006015 Universal stress protein A RG43_RS13655 2ce28f8d2c735cd6eef7ac6b1d1e1ef8 144 PRINTS PR01438 Universal stress protein signature 2 20 7.3E-9 T 09-03-2017 IPR006015 Universal stress protein A RG43_RS13655 2ce28f8d2c735cd6eef7ac6b1d1e1ef8 144 PRINTS PR01438 Universal stress protein signature 122 144 7.3E-9 T 09-03-2017 IPR006015 Universal stress protein A RG43_RS01560 523221cc867ee2bd766bb3390d7edbb2 89 Pfam PF06611 Protein of unknown function (DUF1145) 1 58 2.4E-27 T 09-03-2017 IPR009525 Protein of unknown function DUF1145 RG43_RS07525 0b851d048d04acd78130955c6dd8e775 453 Gene3D G3DSA:2.30.170.30 1 54 2.7E-26 T 09-03-2017 RG43_RS07525 0b851d048d04acd78130955c6dd8e775 453 Gene3D G3DSA:1.10.220.70 56 141 5.7E-35 T 09-03-2017 RG43_RS07525 0b851d048d04acd78130955c6dd8e775 453 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 12 444 3.9E-202 T 09-03-2017 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 RG43_RS07525 0b851d048d04acd78130955c6dd8e775 453 Gene3D G3DSA:3.20.20.70 143 453 1.6E-157 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS07525 0b851d048d04acd78130955c6dd8e775 453 PIRSF PIRSF018788 1 453 5.0E-232 T 09-03-2017 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 RG43_RS22450 c05f2fd369dbdaf723019a72204b53dd 224 Pfam PF04225 Opacity-associated protein A LysM-like domain 139 223 1.2E-34 T 09-03-2017 IPR007340 Opacity-associated protein A RG43_RS22450 c05f2fd369dbdaf723019a72204b53dd 224 Pfam PF08525 Opacity-associated protein A N-terminal motif 35 62 4.3E-9 T 09-03-2017 IPR013731 Opacity-associated protein A, N-terminal RG43_RS01110 985a1c51ad51739935f986266bb8777f 55 Pfam PF13940 Toxin Ldr, type I toxin-antitoxin system 21 55 3.1E-26 T 09-03-2017 IPR025253 Type I toxin-antitoxin system, toxin Ldr RG43_RS24310 1c03c9371fca27cc35c03f296902dcf9 93 ProDom PD064783 PHAGE HOLIN LYSIS P2 MEMBRANE GPY Y TRANSMEMBRANE HOMOLOG INNER 1 88 5.0E-42 T 09-03-2017 IPR007633 Bacteriophage P2, GpY, holin RG43_RS24310 1c03c9371fca27cc35c03f296902dcf9 93 Pfam PF04550 Phage holin family 2 1 86 1.1E-37 T 09-03-2017 IPR007633 Bacteriophage P2, GpY, holin RG43_RS22115 4018b6101766fde32c407ff5f85d322a 59 SUPERFAMILY SSF54211 1 58 4.17E-5 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold RG43_RS01475 9afdd3e8ea7f99e8498305f6f3865de4 91 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 30 80 1.0E-8 T 09-03-2017 IPR012933 HicA mRNA interferase family GO:0003729 RG43_RS09215 d3fa5e2fadd97bce5ef5736ecdfe2f5b 378 Pfam PF05762 VWA domain containing CoxE-like protein 151 372 2.0E-67 T 09-03-2017 IPR008912 Uncharacterised protein family CoxE-like RG43_RS09215 d3fa5e2fadd97bce5ef5736ecdfe2f5b 378 Gene3D G3DSA:3.40.50.410 215 334 2.9E-6 T 09-03-2017 IPR002035 von Willebrand factor, type A RG43_RS09215 d3fa5e2fadd97bce5ef5736ecdfe2f5b 378 SUPERFAMILY SSF53300 212 356 9.54E-21 T 09-03-2017 IPR002035 von Willebrand factor, type A RG43_RS09215 d3fa5e2fadd97bce5ef5736ecdfe2f5b 378 SMART SM00327 214 373 4.7E-11 T 09-03-2017 IPR002035 von Willebrand factor, type A RG43_RS00255 83ea75e1e7b56db0a312289ca6769fe6 229 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 30 228 8.0E-71 T 09-03-2017 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 RG43_RS00255 83ea75e1e7b56db0a312289ca6769fe6 229 SUPERFAMILY SSF51366 6 225 1.91E-61 T 09-03-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RG43_RS00255 83ea75e1e7b56db0a312289ca6769fe6 229 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 6 228 41.35 T 09-03-2017 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 RG43_RS00255 83ea75e1e7b56db0a312289ca6769fe6 229 Gene3D G3DSA:3.20.20.70 2 228 4.4E-93 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS06050 b6bd3605ce1ab23a90fb92499733f4e6 520 Pfam PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) 6 471 3.2E-98 T 09-03-2017 IPR013381 CRISPR-associated protein Cse1 RG43_RS06050 b6bd3605ce1ab23a90fb92499733f4e6 520 TIGRFAM TIGR02547 casA_cse1: CRISPR type I-E/ECOLI-associated protein CasA/Cse1 5 509 9.5E-183 T 09-03-2017 IPR013381 CRISPR-associated protein Cse1 RG43_RS21445 b3178942be03519914f7a98d07edbd74 72 Pfam PF10837 Protein of unknown function (DUF2575) 2 72 5.0E-46 T 09-03-2017 IPR020105 Uncharacterised protein family YaaY RG43_RS21445 b3178942be03519914f7a98d07edbd74 72 ProDom PD056390 YAAY CYTOPLASMIC STY0053 ECS0027 3 72 1.0E-32 T 09-03-2017 IPR020105 Uncharacterised protein family YaaY RG43_RS08540 c20907b7ce1a32a8a8bc7b4164745cf3 267 Hamap MF_01290 2-keto-3-deoxy-L-rhamnonate aldolase [rhmA]. 1 267 75.029 T 09-03-2017 IPR023593 2-keto-3-deoxy-L-rhamnonate aldolase GO:0016832 KEGG: 00051+4.1.2.53|MetaCyc: PWY-6713 RG43_RS08540 c20907b7ce1a32a8a8bc7b4164745cf3 267 Gene3D G3DSA:3.20.20.60 5 255 2.4E-81 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RG43_RS08540 c20907b7ce1a32a8a8bc7b4164745cf3 267 SUPERFAMILY SSF51621 4 255 5.65E-83 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RG43_RS08540 c20907b7ce1a32a8a8bc7b4164745cf3 267 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 19 244 1.0E-68 T 09-03-2017 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 RG43_RS08345 3196ce19e8d8d88083060387212e6a7a 147 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 9 126 19.913 T 09-03-2017 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 RG43_RS08345 3196ce19e8d8d88083060387212e6a7a 147 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 28 125 5.0E-31 T 09-03-2017 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RG43_RS17795 d0838395b31bebf9265784b6d134802b 391 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 7 390 1.5E-131 T 09-03-2017 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 RG43_RS17795 d0838395b31bebf9265784b6d134802b 391 Pfam PF01494 FAD binding domain 6 339 1.6E-28 T 09-03-2017 IPR002938 FAD-binding domain GO:0071949 RG43_RS17795 d0838395b31bebf9265784b6d134802b 391 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 294 307 - T 09-03-2017 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 RG43_RS17795 d0838395b31bebf9265784b6d134802b 391 Gene3D G3DSA:3.50.50.60 268 354 1.0E-46 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS17795 d0838395b31bebf9265784b6d134802b 391 Gene3D G3DSA:3.50.50.60 6 183 1.0E-46 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS17795 d0838395b31bebf9265784b6d134802b 391 SUPERFAMILY SSF51905 6 178 3.89E-61 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS17795 d0838395b31bebf9265784b6d134802b 391 SUPERFAMILY SSF51905 267 383 3.89E-61 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS17795 d0838395b31bebf9265784b6d134802b 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 6.2E-19 T 09-03-2017 RG43_RS17795 d0838395b31bebf9265784b6d134802b 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 311 6.2E-19 T 09-03-2017 RG43_RS17795 d0838395b31bebf9265784b6d134802b 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 6.2E-19 T 09-03-2017 RG43_RS17795 d0838395b31bebf9265784b6d134802b 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 280 295 6.2E-19 T 09-03-2017 RG43_RS07530 fb13c61731e75f4a875ed2bacd1b7153 295 PIRSF PIRSF018982 46 295 4.6E-103 T 09-03-2017 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 RG43_RS07530 fb13c61731e75f4a875ed2bacd1b7153 295 Hamap MF_00601 Ethanolamine ammonia-lyase light chain [eutC]. 57 294 40.838 T 09-03-2017 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 RG43_RS07530 fb13c61731e75f4a875ed2bacd1b7153 295 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 65 293 9.2E-79 T 09-03-2017 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 RG43_RS09175 8779934939f8d857811a6b91a06ced7e 243 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 68 238 2.9E-22 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS09175 8779934939f8d857811a6b91a06ced7e 243 Gene3D G3DSA:1.10.3720.10 8 239 3.7E-30 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS09175 8779934939f8d857811a6b91a06ced7e 243 SUPERFAMILY SSF161098 46 233 1.15E-32 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS08480 6d714dc183b96f255871374e6a71eef9 111 SUPERFAMILY SSF103481 5 107 2.48E-15 T 09-03-2017 RG43_RS08480 6d714dc183b96f255871374e6a71eef9 111 Pfam PF00892 EamA-like transporter family 3 107 7.3E-10 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 RG43_RS08480 6d714dc183b96f255871374e6a71eef9 111 Hamap MF_01869 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE [arnE]. 1 111 28.71 T 09-03-2017 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE RG43_RS11515 d7953cf31b6274e1b1d7371ed7f12e8a 269 Gene3D G3DSA:3.40.50.150 70 222 1.7E-26 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS11515 d7953cf31b6274e1b1d7371ed7f12e8a 269 SUPERFAMILY SSF53335 4 250 5.58E-56 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS11515 d7953cf31b6274e1b1d7371ed7f12e8a 269 PIRSF PIRSF018249 1 268 2.9E-94 T 09-03-2017 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 RG43_RS11515 d7953cf31b6274e1b1d7371ed7f12e8a 269 Pfam PF13847 Methyltransferase domain 84 196 1.4E-15 T 09-03-2017 IPR025714 Methyltransferase domain RG43_RS09210 54c472e20273c7e532951c407ea8de22 667 Pfam PF04434 SWIM zinc finger 159 183 0.083 T 09-03-2017 IPR007527 Zinc finger, SWIM-type GO:0008270 RG43_RS09210 54c472e20273c7e532951c407ea8de22 667 Pfam PF04434 SWIM zinc finger 64 88 0.018 T 09-03-2017 IPR007527 Zinc finger, SWIM-type GO:0008270 RG43_RS05250 d5700e04613908d70757f7b9116d3d9e 364 Gene3D G3DSA:2.40.30.110 278 361 4.5E-30 T 09-03-2017 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RG43_RS05250 d5700e04613908d70757f7b9116d3d9e 364 PIRSF PIRSF006487 1 363 1.2E-78 T 09-03-2017 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 RG43_RS05250 d5700e04613908d70757f7b9116d3d9e 364 SUPERFAMILY SSF103025 3 277 4.4E-89 T 09-03-2017 RG43_RS05250 d5700e04613908d70757f7b9116d3d9e 364 Gene3D G3DSA:3.30.70.1400 54 137 8.3E-32 T 09-03-2017 RG43_RS05250 d5700e04613908d70757f7b9116d3d9e 364 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 359 44.564 T 09-03-2017 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RG43_RS05250 d5700e04613908d70757f7b9116d3d9e 364 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 2 359 6.8E-170 T 09-03-2017 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 RG43_RS05250 d5700e04613908d70757f7b9116d3d9e 364 SUPERFAMILY SSF101790 271 361 2.78E-26 T 09-03-2017 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain RG43_RS05250 d5700e04613908d70757f7b9116d3d9e 364 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 254 4.0E-82 T 09-03-2017 IPR006222 Glycine cleavage T-protein-like, N-terminal RG43_RS05250 d5700e04613908d70757f7b9116d3d9e 364 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 262 353 8.5E-18 T 09-03-2017 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RG43_RS05250 d5700e04613908d70757f7b9116d3d9e 364 Gene3D G3DSA:3.30.1360.120 144 231 2.6E-52 T 09-03-2017 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 RG43_RS05250 d5700e04613908d70757f7b9116d3d9e 364 Gene3D G3DSA:3.30.1360.120 3 53 2.6E-52 T 09-03-2017 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 RG43_RS19330 9d3d579869752875bf55eaadae162749 483 Pfam PF03972 MmgE/PrpD family 18 462 2.9E-158 T 09-03-2017 IPR005656 MmgE/PrpD GO:0016829 RG43_RS19330 9d3d579869752875bf55eaadae162749 483 Gene3D G3DSA:3.30.1330.120 287 426 2.8E-64 T 09-03-2017 RG43_RS19330 9d3d579869752875bf55eaadae162749 483 SUPERFAMILY SSF103378 13 482 8.5E-161 T 09-03-2017 IPR005656 MmgE/PrpD GO:0016829 RG43_RS19330 9d3d579869752875bf55eaadae162749 483 TIGRFAM TIGR02330 prpD: 2-methylcitrate dehydratase 13 483 1.2E-279 T 09-03-2017 IPR012705 2-methylcitrate dehydratase PrpD GO:0019629|GO:0047547|GO:0051537 KEGG: 00640+4.2.1.79 RG43_RS14690 dcdbe9514f45d9f504f8b1ef62b42930 108 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 12 93 5.0E-42 T 09-03-2017 IPR027354 YcgL domain RG43_RS14690 dcdbe9514f45d9f504f8b1ef62b42930 108 SUPERFAMILY SSF160191 4 106 3.27E-43 T 09-03-2017 RG43_RS14690 dcdbe9514f45d9f504f8b1ef62b42930 108 Hamap MF_01866 Protein YcgL [ycgL]. 12 99 27.677 T 09-03-2017 IPR027354 YcgL domain RG43_RS14690 dcdbe9514f45d9f504f8b1ef62b42930 108 Pfam PF05166 YcgL domain 14 86 1.8E-33 T 09-03-2017 IPR027354 YcgL domain RG43_RS23515 2bd8e0625350ed10441175871a19b413 80 ProDom PD865006 YJBE PRECURSOR SIGNAL MEMBRANE OUTER EXPORTED 1 25 7.0E-7 T 09-03-2017 RG43_RS23515 2bd8e0625350ed10441175871a19b413 80 Pfam PF11106 Exopolysaccharide production protein YjbE 1 79 5.1E-29 T 09-03-2017 IPR025858 Exopolysaccharide production protein YjbE RG43_RS24565 770bdfbee1d0a69009cd1b7c26b3fe13 96 SMART SM00530 36 90 3.2E-8 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RG43_RS24565 770bdfbee1d0a69009cd1b7c26b3fe13 96 Pfam PF13560 Helix-turn-helix domain 37 81 2.2E-9 T 09-03-2017 RG43_RS24565 770bdfbee1d0a69009cd1b7c26b3fe13 96 Gene3D G3DSA:1.10.260.40 36 91 2.6E-20 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS24565 770bdfbee1d0a69009cd1b7c26b3fe13 96 SUPERFAMILY SSF47413 36 90 6.97E-12 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS11105 73c09fd2a08818f5cdd3af2e9f68581c 188 Gene3D G3DSA:3.10.180.10 1 187 6.8E-81 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RG43_RS11105 73c09fd2a08818f5cdd3af2e9f68581c 188 SUPERFAMILY SSF54593 2 186 5.06E-71 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RG43_RS11105 73c09fd2a08818f5cdd3af2e9f68581c 188 Pfam PF06185 YecM protein 10 185 1.4E-72 T 09-03-2017 IPR010393 Protein of unknown function DUF991 RG43_RS12620 83d6ff6c63d40c3bcbba4d7b005d7000 309 Pfam PF05472 DNA replication terminus site-binding protein (Ter protein) 9 306 1.8E-137 T 09-03-2017 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 RG43_RS12620 83d6ff6c63d40c3bcbba4d7b005d7000 309 Hamap MF_00483 DNA replication terminus site-binding protein [tus]. 1 309 73.568 T 09-03-2017 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 RG43_RS12620 83d6ff6c63d40c3bcbba4d7b005d7000 309 TIGRFAM TIGR02648 rep_term_tus: DNA replication terminus site-binding protein 10 308 2.5E-165 T 09-03-2017 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 RG43_RS12620 83d6ff6c63d40c3bcbba4d7b005d7000 309 SUPERFAMILY SSF56596 5 308 4.45E-128 T 09-03-2017 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 RG43_RS12620 83d6ff6c63d40c3bcbba4d7b005d7000 309 Gene3D G3DSA:3.50.14.10 236 281 3.2E-14 T 09-03-2017 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 RG43_RS12620 83d6ff6c63d40c3bcbba4d7b005d7000 309 Gene3D G3DSA:3.50.14.10 7 219 4.4E-87 T 09-03-2017 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 RG43_RS24700 e349bade760d7931fcc4e98ad1baff50 210 SUPERFAMILY SSF52540 17 199 2.96E-34 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS24700 e349bade760d7931fcc4e98ad1baff50 210 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 14 197 28.826 T 09-03-2017 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 RG43_RS24700 e349bade760d7931fcc4e98ad1baff50 210 Gene3D G3DSA:3.40.50.300 6 198 1.7E-43 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS24700 e349bade760d7931fcc4e98ad1baff50 210 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 10 193 7.1E-76 T 09-03-2017 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 RG43_RS24700 e349bade760d7931fcc4e98ad1baff50 210 Pfam PF01926 50S ribosome-binding GTPase 28 146 8.5E-20 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 RG43_RS02245 1f63282b67d1d1103427e5745da8a3f5 95 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 95 7.4E-34 T 09-03-2017 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 RG43_RS02245 1f63282b67d1d1103427e5745da8a3f5 95 Hamap MF_01564 Protein TusB [tusB]. 1 95 30.93 T 09-03-2017 IPR023526 Sulphur relay, TusB GO:0002143|GO:0005737 RG43_RS02245 1f63282b67d1d1103427e5745da8a3f5 95 SUPERFAMILY SSF75169 1 95 1.91E-32 T 09-03-2017 IPR027396 DsrEFH-like RG43_RS02245 1f63282b67d1d1103427e5745da8a3f5 95 Gene3D G3DSA:3.40.1260.10 1 94 2.1E-35 T 09-03-2017 IPR027396 DsrEFH-like RG43_RS02245 1f63282b67d1d1103427e5745da8a3f5 95 Pfam PF04077 DsrH like protein 7 91 3.3E-30 T 09-03-2017 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 RG43_RS04050 4b7479fb6908490a001861e9244f710f 358 Pfam PF03747 ADP-ribosylglycohydrolase 15 326 3.7E-43 T 09-03-2017 IPR005502 ADP-ribosylation/Crystallin J1 RG43_RS04050 4b7479fb6908490a001861e9244f710f 358 SUPERFAMILY SSF101478 10 329 1.96E-47 T 09-03-2017 IPR005502 ADP-ribosylation/Crystallin J1 RG43_RS26425 4b7479fb6908490a001861e9244f710f 358 Pfam PF03747 ADP-ribosylglycohydrolase 15 326 3.7E-43 T 09-03-2017 IPR005502 ADP-ribosylation/Crystallin J1 RG43_RS26425 4b7479fb6908490a001861e9244f710f 358 SUPERFAMILY SSF101478 10 329 1.96E-47 T 09-03-2017 IPR005502 ADP-ribosylation/Crystallin J1 RG43_RS11910 f26d4fd0f9fe60709658bf7279b3e2a2 191 Pfam PF05962 HutD 13 175 2.1E-43 T 09-03-2017 IPR010282 Uncharacterised protein family HutD/Ves RG43_RS11910 f26d4fd0f9fe60709658bf7279b3e2a2 191 Gene3D G3DSA:2.60.120.10 8 112 1.4E-34 T 09-03-2017 IPR014710 RmlC-like jelly roll fold RG43_RS11910 f26d4fd0f9fe60709658bf7279b3e2a2 191 Hamap MF_01591 Protein Ves [ves]. 1 191 58.913 T 09-03-2017 IPR023482 Uncharacterised protein family Ves RG43_RS11910 f26d4fd0f9fe60709658bf7279b3e2a2 191 SUPERFAMILY SSF51182 1 182 1.42E-45 T 09-03-2017 IPR011051 RmlC-like cupin domain RG43_RS19695 498721daf0d230f26a705c7057ff8745 116 Pfam PF05717 IS66 Orf2 like protein 9 106 1.1E-36 T 09-03-2017 IPR008878 Transposase IS66, Orf2 RG43_RS16025 3927f538604a87324d969b309096f03c 754 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 65 718 0.0 T 09-03-2017 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 RG43_RS16025 3927f538604a87324d969b309096f03c 754 Pfam PF00753 Metallo-beta-lactamase superfamily 505 684 1.6E-18 T 09-03-2017 IPR001279 Metallo-beta-lactamase RG43_RS16025 3927f538604a87324d969b309096f03c 754 Pfam PF03772 Competence protein 201 468 4.9E-54 T 09-03-2017 IPR004477 ComEC/Rec2-related protein RG43_RS16025 3927f538604a87324d969b309096f03c 754 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 221 405 1.2E-61 T 09-03-2017 IPR004477 ComEC/Rec2-related protein RG43_RS16025 3927f538604a87324d969b309096f03c 754 SMART SM00849 508 689 1.7E-8 T 09-03-2017 IPR001279 Metallo-beta-lactamase RG43_RS16025 3927f538604a87324d969b309096f03c 754 SUPERFAMILY SSF56281 495 742 2.36E-46 T 09-03-2017 IPR001279 Metallo-beta-lactamase RG43_RS16025 3927f538604a87324d969b309096f03c 754 Gene3D G3DSA:3.60.15.10 472 683 1.1E-31 T 09-03-2017 IPR001279 Metallo-beta-lactamase RG43_RS00970 d7997edec107c0e6dafb6563581aac7f 236 Pfam PF11254 Protein of unknown function (DUF3053) 15 230 3.4E-89 T 09-03-2017 IPR021413 Protein of unknown function DUF3053 RG43_RS08770 c2016f296eb42227d9dfe25bc81b90e6 149 SUPERFAMILY SSF48695 48 145 2.26E-40 T 09-03-2017 IPR011031 Multihaem cytochrome RG43_RS08770 c2016f296eb42227d9dfe25bc81b90e6 149 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 40 142 6.3E-43 T 09-03-2017 IPR005591 Nitrate reductase cytochrome c-type subunit NapB RG43_RS08770 c2016f296eb42227d9dfe25bc81b90e6 149 PIRSF PIRSF006105 3 149 3.2E-54 T 09-03-2017 IPR005591 Nitrate reductase cytochrome c-type subunit NapB RG43_RS08770 c2016f296eb42227d9dfe25bc81b90e6 149 Gene3D G3DSA:4.10.1020.10 62 129 5.9E-33 T 09-03-2017 IPR027406 Periplasmic nitrate reductase NapB subunit, heme binding domain RG43_RS01470 1e4dce708f003a5b8f796ef25b65eca8 374 Pfam PF12698 ABC-2 family transporter protein 26 363 2.7E-31 T 09-03-2017 RG43_RS25605 8fdd40221b7e795c594f3e3a0db8351f 415 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 13 396 1.7E-155 T 09-03-2017 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 RG43_RS25605 8fdd40221b7e795c594f3e3a0db8351f 415 PRINTS PR00166 Aromatic amino acid permease signature 43 62 8.0E-102 T 09-03-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 RG43_RS25605 8fdd40221b7e795c594f3e3a0db8351f 415 PRINTS PR00166 Aromatic amino acid permease signature 294 313 8.0E-102 T 09-03-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 RG43_RS25605 8fdd40221b7e795c594f3e3a0db8351f 415 PRINTS PR00166 Aromatic amino acid permease signature 349 368 8.0E-102 T 09-03-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 RG43_RS25605 8fdd40221b7e795c594f3e3a0db8351f 415 PRINTS PR00166 Aromatic amino acid permease signature 194 216 8.0E-102 T 09-03-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 RG43_RS25605 8fdd40221b7e795c594f3e3a0db8351f 415 PRINTS PR00166 Aromatic amino acid permease signature 233 252 8.0E-102 T 09-03-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 RG43_RS25605 8fdd40221b7e795c594f3e3a0db8351f 415 PRINTS PR00166 Aromatic amino acid permease signature 16 39 8.0E-102 T 09-03-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 RG43_RS25605 8fdd40221b7e795c594f3e3a0db8351f 415 PRINTS PR00166 Aromatic amino acid permease signature 328 346 8.0E-102 T 09-03-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 RG43_RS25605 8fdd40221b7e795c594f3e3a0db8351f 415 PRINTS PR00166 Aromatic amino acid permease signature 88 108 8.0E-102 T 09-03-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 RG43_RS25605 8fdd40221b7e795c594f3e3a0db8351f 415 PRINTS PR00166 Aromatic amino acid permease signature 154 174 8.0E-102 T 09-03-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 RG43_RS25605 8fdd40221b7e795c594f3e3a0db8351f 415 Pfam PF03222 Tryptophan/tyrosine permease family 7 403 2.3E-149 T 09-03-2017 IPR018227 Tryptophan/tyrosine permease GO:0003333 RG43_RS25605 8fdd40221b7e795c594f3e3a0db8351f 415 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 23 39 - T 09-03-2017 IPR013061 Tryptophan/tryrosine permease, conserved site RG43_RS15705 b6db50dd019e49af287c50cdfc9f22ae 285 Pfam PF04809 HupH hydrogenase expression protein, C-terminal conserved region 50 140 1.5E-8 T 09-03-2017 IPR006894 HupH hydrogenase expression protein, C-terminal RG43_RS15705 b6db50dd019e49af287c50cdfc9f22ae 285 Pfam PF04809 HupH hydrogenase expression protein, C-terminal conserved region 164 279 3.4E-32 T 09-03-2017 IPR006894 HupH hydrogenase expression protein, C-terminal RG43_RS15705 b6db50dd019e49af287c50cdfc9f22ae 285 ProDom PD005668 HYDROGENASE HUPH HYDROGENASE-1 EXPRESSION/FORMATION OPERON PROTEIN C-TERMINAL EXPRESSION HYAF HOXQ 49 149 3.0E-25 T 09-03-2017 IPR006894 HupH hydrogenase expression protein, C-terminal RG43_RS15705 b6db50dd019e49af287c50cdfc9f22ae 285 ProDom PD005668 HYDROGENASE HUPH HYDROGENASE-1 EXPRESSION/FORMATION OPERON PROTEIN C-TERMINAL EXPRESSION HYAF HOXQ 164 279 7.0E-63 T 09-03-2017 IPR006894 HupH hydrogenase expression protein, C-terminal RG43_RS15215 67518bce8b401163aa75976ff1acc558 97 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 90 1.9E-20 T 09-03-2017 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 RG43_RS15215 67518bce8b401163aa75976ff1acc558 97 Pfam PF04316 Anti-sigma-28 factor, FlgM 40 88 1.5E-9 T 09-03-2017 IPR031316 Anti-sigma-28 factor FlgM, C-terminal RG43_RS15215 67518bce8b401163aa75976ff1acc558 97 SUPERFAMILY SSF101498 1 89 6.93E-13 T 09-03-2017 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 RG43_RS15435 3042d49d161d04e56a534167feab81ff 230 Pfam PF00665 Integrase core domain 62 176 6.4E-26 T 09-03-2017 IPR001584 Integrase, catalytic core GO:0015074 RG43_RS15435 3042d49d161d04e56a534167feab81ff 230 SUPERFAMILY SSF53098 59 214 4.55E-37 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS15435 3042d49d161d04e56a534167feab81ff 230 Gene3D G3DSA:3.30.420.10 57 212 4.3E-35 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS03265 27e8823fdb54437ca471ef62fc84e885 158 SUPERFAMILY SSF52728 5 156 3.14E-48 T 09-03-2017 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 RG43_RS03265 27e8823fdb54437ca471ef62fc84e885 158 Pfam PF03830 PTS system sorbose subfamily IIB component 6 153 2.4E-48 T 09-03-2017 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 RG43_RS03265 27e8823fdb54437ca471ef62fc84e885 158 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 5 155 6.6E-71 T 09-03-2017 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 RG43_RS03265 27e8823fdb54437ca471ef62fc84e885 158 Gene3D G3DSA:3.40.35.10 5 156 3.2E-54 T 09-03-2017 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 RG43_RS26360 1e5087778c85c4bd82c5db4cfe1124f6 223 Pfam PF06693 Protein of unknown function (DUF1190) 41 210 4.2E-57 T 09-03-2017 IPR009576 Biofilm formation YgiB RG43_RS26360 1e5087778c85c4bd82c5db4cfe1124f6 223 Hamap MF_01188 UPF0441 protein YgiB [ygiB]. 1 223 36.617 T 09-03-2017 IPR009576 Biofilm formation YgiB RG43_RS03985 1e5087778c85c4bd82c5db4cfe1124f6 223 Pfam PF06693 Protein of unknown function (DUF1190) 41 210 4.2E-57 T 09-03-2017 IPR009576 Biofilm formation YgiB RG43_RS03985 1e5087778c85c4bd82c5db4cfe1124f6 223 Hamap MF_01188 UPF0441 protein YgiB [ygiB]. 1 223 36.617 T 09-03-2017 IPR009576 Biofilm formation YgiB RG43_RS19425 14444aaa95a32e6c731c187e70914c07 201 SMART SM00248 5 34 1000.0 T 09-03-2017 IPR002110 Ankyrin repeat GO:0005515 RG43_RS19425 14444aaa95a32e6c731c187e70914c07 201 SMART SM00248 138 172 8.7 T 09-03-2017 IPR002110 Ankyrin repeat GO:0005515 RG43_RS19425 14444aaa95a32e6c731c187e70914c07 201 SMART SM00248 107 134 980.0 T 09-03-2017 IPR002110 Ankyrin repeat GO:0005515 RG43_RS19425 14444aaa95a32e6c731c187e70914c07 201 SMART SM00248 38 67 0.0017 T 09-03-2017 IPR002110 Ankyrin repeat GO:0005515 RG43_RS19425 14444aaa95a32e6c731c187e70914c07 201 SMART SM00248 176 201 1400.0 T 09-03-2017 IPR002110 Ankyrin repeat GO:0005515 RG43_RS19425 14444aaa95a32e6c731c187e70914c07 201 SMART SM00248 71 100 88.0 T 09-03-2017 IPR002110 Ankyrin repeat GO:0005515 RG43_RS19425 14444aaa95a32e6c731c187e70914c07 201 Gene3D G3DSA:1.25.40.20 12 201 4.3E-45 T 09-03-2017 IPR020683 Ankyrin repeat-containing domain RG43_RS19425 14444aaa95a32e6c731c187e70914c07 201 Pfam PF13637 Ankyrin repeats (many copies) 13 59 2.1E-7 T 09-03-2017 RG43_RS19425 14444aaa95a32e6c731c187e70914c07 201 SUPERFAMILY SSF48403 11 201 1.7E-45 T 09-03-2017 IPR020683 Ankyrin repeat-containing domain RG43_RS19425 14444aaa95a32e6c731c187e70914c07 201 Pfam PF12796 Ankyrin repeats (3 copies) 79 174 1.2E-9 T 09-03-2017 IPR020683 Ankyrin repeat-containing domain RG43_RS22230 35e2b0fabd19991df9115caf965e84f4 131 SUPERFAMILY SSF55298 7 129 1.19E-35 T 09-03-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RG43_RS22230 35e2b0fabd19991df9115caf965e84f4 131 Gene3D G3DSA:3.30.1330.40 14 130 4.9E-41 T 09-03-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RG43_RS22230 35e2b0fabd19991df9115caf965e84f4 131 Pfam PF01042 Endoribonuclease L-PSP 13 127 2.3E-31 T 09-03-2017 IPR006175 YjgF/YER057c/UK114 family RG43_RS26670 8d32068c463f3e27b2c36a3f48ab8a61 499 Pfam PF01384 Phosphate transporter family 206 488 2.1E-44 T 09-03-2017 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 RG43_RS26670 8d32068c463f3e27b2c36a3f48ab8a61 499 Pfam PF01384 Phosphate transporter family 30 182 3.0E-36 T 09-03-2017 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 RG43_RS04295 8d32068c463f3e27b2c36a3f48ab8a61 499 Pfam PF01384 Phosphate transporter family 206 488 2.1E-44 T 09-03-2017 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 RG43_RS04295 8d32068c463f3e27b2c36a3f48ab8a61 499 Pfam PF01384 Phosphate transporter family 30 182 3.0E-36 T 09-03-2017 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 RG43_RS13215 c0100bc55b034f33defa389522319e3a 231 SUPERFAMILY SSF89155 2 156 6.28E-26 T 09-03-2017 IPR020945 DMSO/Nitrate reductase chaperone RG43_RS13215 c0100bc55b034f33defa389522319e3a 231 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 9 154 1.7E-34 T 09-03-2017 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 RG43_RS13215 c0100bc55b034f33defa389522319e3a 231 Pfam PF02613 Nitrate reductase delta subunit 44 151 5.1E-11 T 09-03-2017 IPR020945 DMSO/Nitrate reductase chaperone RG43_RS03460 fa1a4201301f9503dd5d51aa06fb8a10 101 Pfam PF05957 Bacterial protein of unknown function (DUF883) 9 101 5.8E-31 T 09-03-2017 IPR010279 Protein of unknown function DUF883, ElaB RG43_RS10155 47ff9f00772683891fcbe2b010127a1a 140 Pfam PF11924 Invasin beta-domain of outer membrane 59 116 8.4E-8 T 09-03-2017 IPR024519 Invasin beta-domain of outer membrane RG43_RS07385 79de25710027b9941b278a537a881745 287 Pfam PF04228 Putative neutral zinc metallopeptidase 1 283 5.5E-143 T 09-03-2017 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative RG43_RS17710 ef514bf23feb8d73117447179bd28223 468 Pfam PF03573 outer membrane porin, OprD family 33 430 4.2E-25 T 09-03-2017 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 RG43_RS17710 ef514bf23feb8d73117447179bd28223 468 Gene3D G3DSA:2.40.160.10 38 468 4.8E-50 T 09-03-2017 IPR023614 Porin domain RG43_RS21480 bf26eb0b95eab3c7af735ac0f165f98a 134 ProDom PD082838 YAAI PERIPLASMIC STY0011 ECS0013 PRECURSOR SIGNAL 22 134 4.0E-61 T 09-03-2017 IPR020240 Uncharacterised protein family UPF0412, YaaI RG43_RS21480 bf26eb0b95eab3c7af735ac0f165f98a 134 Pfam PF10807 Protein of unknown function (DUF2541) 3 132 5.2E-65 T 09-03-2017 IPR020240 Uncharacterised protein family UPF0412, YaaI RG43_RS21480 bf26eb0b95eab3c7af735ac0f165f98a 134 Hamap MF_01372 UPF0412 protein YaaI [yaaI]. 1 134 49.691 T 09-03-2017 IPR020240 Uncharacterised protein family UPF0412, YaaI RG43_RS26180 8163c5c823a4eb375a73bf6ccfc65a9a 281 Pfam PF13708 Domain of unknown function (DUF4942) 88 275 4.0E-59 T 09-03-2017 IPR031339 Domain of unknown function DUF4942 RG43_RS03805 8163c5c823a4eb375a73bf6ccfc65a9a 281 Pfam PF13708 Domain of unknown function (DUF4942) 88 275 4.0E-59 T 09-03-2017 IPR031339 Domain of unknown function DUF4942 RG43_RS11185 303bfe6a5ecae25b2e42b2277cadfe88 688 TIGRFAM TIGR02675 tape_meas_nterm: tape measure domain 287 355 1.8E-16 T 09-03-2017 IPR013491 Caudovirus, tape measure, N-terminal RG43_RS24775 9062fe6cf283187c0c37942d78b3bc1c 181 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 09-03-2017 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 RG43_RS24775 9062fe6cf283187c0c37942d78b3bc1c 181 Pfam PF12724 Flavodoxin domain 4 152 2.1E-53 T 09-03-2017 IPR026816 Flavodoxin domain RG43_RS24775 9062fe6cf283187c0c37942d78b3bc1c 181 Gene3D G3DSA:3.40.50.360 105 175 7.9E-28 T 09-03-2017 IPR029039 Flavoprotein-like domain RG43_RS24775 9062fe6cf283187c0c37942d78b3bc1c 181 Gene3D G3DSA:3.40.50.360 2 73 7.9E-28 T 09-03-2017 IPR029039 Flavoprotein-like domain RG43_RS24775 9062fe6cf283187c0c37942d78b3bc1c 181 SUPERFAMILY SSF52218 2 172 2.17E-30 T 09-03-2017 IPR029039 Flavoprotein-like domain RG43_RS00450 f8796a6d2792401e04459c30ea6ad2be 226 Pfam PF07385 Protein of unknown function (DUF1498) 1 222 1.1E-88 T 09-03-2017 IPR010864 Protein of unknown function DUF1498 KEGG: 00040+5.3.1.15 RG43_RS24340 c4736d12e58cb56257359d69540f8e1d 357 TIGRFAM TIGR01551 major_capsid_P2: phage major capsid protein, P2 family 8 342 1.3E-94 T 09-03-2017 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 RG43_RS24340 c4736d12e58cb56257359d69540f8e1d 357 Pfam PF05125 Phage major capsid protein, P2 family 8 340 1.8E-146 T 09-03-2017 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 RG43_RS19580 04292c759098c26a11010cadf11a6dae 297 Gene3D G3DSA:3.40.190.10 94 179 3.5E-19 T 09-03-2017 RG43_RS19580 04292c759098c26a11010cadf11a6dae 297 SUPERFAMILY SSF46785 5 89 4.35E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS19580 04292c759098c26a11010cadf11a6dae 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 2.3E-22 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS19580 04292c759098c26a11010cadf11a6dae 297 SUPERFAMILY SSF53850 92 294 1.81E-43 T 09-03-2017 RG43_RS19580 04292c759098c26a11010cadf11a6dae 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 3.8E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS19580 04292c759098c26a11010cadf11a6dae 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 3.8E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS19580 04292c759098c26a11010cadf11a6dae 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 3.8E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS19580 04292c759098c26a11010cadf11a6dae 297 Pfam PF03466 LysR substrate binding domain 90 294 1.3E-40 T 09-03-2017 IPR005119 LysR, substrate-binding RG43_RS19580 04292c759098c26a11010cadf11a6dae 297 Gene3D G3DSA:1.10.10.10 5 84 6.8E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS19580 04292c759098c26a11010cadf11a6dae 297 Gene3D G3DSA:3.40.190.10 180 265 6.8E-7 T 09-03-2017 RG43_RS03325 f3f729a1b7a7ca1fa5fbef68e9b3da33 111 SUPERFAMILY SSF89447 13 40 6.1E-5 T 09-03-2017 RG43_RS03325 f3f729a1b7a7ca1fa5fbef68e9b3da33 111 ProDom PD030562 SUPPRESSOR HTRA PROTEASE TRANSCRIPTIONAL REGULATOR HTAR SOHA ABRB YDCA BLL1688 14 101 3.0E-47 T 09-03-2017 RG43_RS03325 f3f729a1b7a7ca1fa5fbef68e9b3da33 111 Pfam PF15937 prlF antitoxin for toxin YhaV_toxin 14 110 1.5E-38 T 09-03-2017 IPR031848 PrlF antitoxin GO:0001558|GO:0003700|GO:0097351 RG43_RS22155 8a3198a08c3043736c517d2711479048 366 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 348 5.5E-116 T 09-03-2017 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 RG43_RS22155 8a3198a08c3043736c517d2711479048 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 345 2.3E-72 T 09-03-2017 IPR005495 Permease LptG/LptF-related GO:0016021 RG43_RS15330 783c2b6afcbb049cce5760c91c90925d 847 Pfam PF00535 Glycosyl transferase family 2 246 428 3.7E-23 T 09-03-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RG43_RS15330 783c2b6afcbb049cce5760c91c90925d 847 Hamap MF_01072 Glucans biosynthesis glucosyltransferase H [mdoH]. 64 745 52.484 T 09-03-2017 IPR023725 Glucan biosynthesis glucosyltransferase H GO:0016758 RG43_RS15330 783c2b6afcbb049cce5760c91c90925d 847 SUPERFAMILY SSF53448 244 532 1.13E-25 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS11135 10bf2b136d7e76cf4539f28f5a1cddd6 131 Pfam PF01124 MAPEG family 3 120 1.5E-26 T 09-03-2017 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein RG43_RS11135 10bf2b136d7e76cf4539f28f5a1cddd6 131 SUPERFAMILY SSF161084 4 127 4.97E-31 T 09-03-2017 RG43_RS11135 10bf2b136d7e76cf4539f28f5a1cddd6 131 Gene3D G3DSA:1.20.120.550 4 127 4.1E-23 T 09-03-2017 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain RG43_RS06700 c4b52d0adfc3a353acae9b84dddbcdf0 356 SUPERFAMILY SSF51569 8 346 1.1E-135 T 09-03-2017 RG43_RS06700 c4b52d0adfc3a353acae9b84dddbcdf0 356 PIRSF PIRSF001361 1 354 7.2E-165 T 09-03-2017 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 RG43_RS06700 c4b52d0adfc3a353acae9b84dddbcdf0 356 Gene3D G3DSA:3.20.20.70 10 348 1.3E-154 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS06700 c4b52d0adfc3a353acae9b84dddbcdf0 356 Pfam PF00793 DAHP synthetase I family 39 340 9.8E-109 T 09-03-2017 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 RG43_RS06700 c4b52d0adfc3a353acae9b84dddbcdf0 356 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 8 350 9.0E-176 T 09-03-2017 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 RG43_RS21790 d739b899c3f992e575e07f47eb4b02c3 179 Hamap MF_01061 Primosomal protein 1 [dnaT]. 3 179 44.25 T 09-03-2017 IPR020917 Primosomal protein 1 GO:0006260 RG43_RS12400 d59044fa0102084093441e92b6aca9a2 365 Gene3D G3DSA:3.20.20.70 4 364 6.2E-134 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS12400 d59044fa0102084093441e92b6aca9a2 365 SUPERFAMILY SSF51395 4 364 6.72E-121 T 09-03-2017 RG43_RS12400 d59044fa0102084093441e92b6aca9a2 365 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 344 4.1E-89 T 09-03-2017 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 RG43_RS09550 b7bc53a4d485a454296f931ba4f7d416 162 SUPERFAMILY SSF51161 12 158 8.87E-32 T 09-03-2017 IPR011004 Trimeric LpxA-like RG43_RS09550 b7bc53a4d485a454296f931ba4f7d416 162 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 117 145 - T 09-03-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 RG43_RS09550 b7bc53a4d485a454296f931ba4f7d416 162 Gene3D G3DSA:2.160.10.10 60 159 1.3E-23 T 09-03-2017 RG43_RS09550 b7bc53a4d485a454296f931ba4f7d416 162 TIGRFAM TIGR04016 WcaB: colanic acid biosynthesis acetyltransferase WcaB 17 162 4.8E-96 T 09-03-2017 IPR024027 Colanic acid biosynthesis, acetyltransferase, WcaB GO:0016747 RG43_RS09550 b7bc53a4d485a454296f931ba4f7d416 162 PIRSF PIRSF000441 2 161 8.6E-47 T 09-03-2017 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 RG43_RS09550 b7bc53a4d485a454296f931ba4f7d416 162 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 110 141 8.1E-8 T 09-03-2017 IPR001451 Hexapeptide repeat RG43_RS21335 b7dfd486a24cdf66bca7ff9b4c27866d 443 SUPERFAMILY SSF103473 8 429 1.83E-76 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS21335 b7dfd486a24cdf66bca7ff9b4c27866d 443 Pfam PF00083 Sugar (and other) transporter 32 433 3.9E-52 T 09-03-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RG43_RS21335 b7dfd486a24cdf66bca7ff9b4c27866d 443 Gene3D G3DSA:1.20.1250.20 243 426 1.1E-15 T 09-03-2017 RG43_RS21335 b7dfd486a24cdf66bca7ff9b4c27866d 443 Gene3D G3DSA:1.20.1250.20 17 201 4.3E-29 T 09-03-2017 RG43_RS23505 aa9120726c2350df7b075fa9ca67eda3 245 Pfam PF06251 Capsule biosynthesis GfcC 19 245 4.9E-91 T 09-03-2017 IPR010425 Domain of unknown function DUF1017 RG43_RS10040 d9ad577f3d85844b07709848c8bb6562 147 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 37 55 2.3E-7 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RG43_RS10040 d9ad577f3d85844b07709848c8bb6562 147 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 23 37 2.3E-7 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RG43_RS10040 d9ad577f3d85844b07709848c8bb6562 147 Gene3D G3DSA:1.10.10.10 4 55 8.1E-9 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS10040 d9ad577f3d85844b07709848c8bb6562 147 SUPERFAMILY SSF46785 4 58 1.37E-13 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS10040 d9ad577f3d85844b07709848c8bb6562 147 Pfam PF08220 DeoR-like helix-turn-helix domain 5 56 1.1E-15 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RG43_RS10040 d9ad577f3d85844b07709848c8bb6562 147 Gene3D G3DSA:3.40.1190.20 93 131 8.9E-5 T 09-03-2017 IPR029056 Ribokinase-like RG43_RS10040 d9ad577f3d85844b07709848c8bb6562 147 SMART SM00420 5 57 5.4E-16 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RG43_RS18460 24ac4d5beba4752697d19faae5d3daba 228 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RG43_RS18460 24ac4d5beba4752697d19faae5d3daba 228 Pfam PF00005 ABC transporter 27 174 9.0E-32 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RG43_RS18460 24ac4d5beba4752697d19faae5d3daba 228 Gene3D G3DSA:3.40.50.300 5 227 2.3E-68 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS18460 24ac4d5beba4752697d19faae5d3daba 228 SMART SM00382 35 225 2.3E-15 T 09-03-2017 IPR003593 AAA+ ATPase domain RG43_RS18460 24ac4d5beba4752697d19faae5d3daba 228 SUPERFAMILY SSF52540 6 226 4.53E-65 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS24990 6b718031d743afca472ac59190c6ef36 206 PIRSF PIRSF006324 1 205 4.4E-55 T 09-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RG43_RS24990 6b718031d743afca472ac59190c6ef36 206 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 19 200 3.4E-61 T 09-03-2017 IPR004778 Homoserine/Threonine efflux protein GO:0016021 RG43_RS24990 6b718031d743afca472ac59190c6ef36 206 Pfam PF01810 LysE type translocator 14 202 9.3E-51 T 09-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RG43_RS03590 cdccbcc9edbe0d90a5e314971b79dca6 110 Gene3D G3DSA:2.40.50.140 2 109 5.5E-38 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS03590 cdccbcc9edbe0d90a5e314971b79dca6 110 Pfam PF01588 Putative tRNA binding domain 14 107 1.7E-31 T 09-03-2017 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 RG43_RS03590 cdccbcc9edbe0d90a5e314971b79dca6 110 SUPERFAMILY SSF50249 8 109 1.37E-32 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold RG43_RS07400 80a9dd33d587548bf4184d4111abf754 66 Pfam PF13980 Uncharacterised protein family (UPF0370) 1 62 4.5E-34 T 09-03-2017 IPR020910 Uncharacterised protein family UPF0370 RG43_RS07400 80a9dd33d587548bf4184d4111abf754 66 Hamap MF_01566 UPF0370 protein YpfN [ypfN]. 1 63 27.722 T 09-03-2017 IPR020910 Uncharacterised protein family UPF0370 RG43_RS13255 3a9fb22da037ff0abaf0d5405920fb26 173 Pfam PF13808 DDE_Tnp_1-associated 7 94 1.8E-33 T 09-03-2017 IPR032806 H repeat-associated protein, N-terminal RG43_RS11840 fa24f242120b61f51f1482bd0513e709 511 SUPERFAMILY SSF161098 307 497 1.31E-20 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS11840 fa24f242120b61f51f1482bd0513e709 511 SUPERFAMILY SSF161098 6 255 7.52E-18 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS11840 fa24f242120b61f51f1482bd0513e709 511 Gene3D G3DSA:1.10.3720.10 9 262 1.1E-17 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS11840 fa24f242120b61f51f1482bd0513e709 511 Gene3D G3DSA:1.10.3720.10 313 501 6.0E-15 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS11840 fa24f242120b61f51f1482bd0513e709 511 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 346 503 1.0E-8 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS08585 3c53ec58bec471b3193845c466f21e0c 84 Gene3D G3DSA:3.10.20.30 2 83 2.2E-19 T 09-03-2017 IPR012675 Beta-grasp domain RG43_RS08585 3c53ec58bec471b3193845c466f21e0c 84 SUPERFAMILY SSF54292 3 84 1.3E-21 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RG43_RS08585 3c53ec58bec471b3193845c466f21e0c 84 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 09-03-2017 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 RG43_RS08585 3c53ec58bec471b3193845c466f21e0c 84 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 77 1.3E-10 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RG43_RS19030 84508423b120d57cc976d964eabd770d 92 ProDom PD029376 YDBD YKIA ECS0442 ECS2009 1 92 8.0E-42 T 09-03-2017 IPR024497 Protein of unknown function DUF2773 RG43_RS19030 84508423b120d57cc976d964eabd770d 92 Pfam PF10971 Protein of unknown function (DUF2773) 13 92 4.5E-38 T 09-03-2017 IPR024497 Protein of unknown function DUF2773 RG43_RS15305 6c599b7fb76e732c980913832a93871c 306 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 4 306 51.914 T 09-03-2017 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 RG43_RS15305 6c599b7fb76e732c980913832a93871c 306 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 5 306 1.3E-150 T 09-03-2017 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 RG43_RS15305 6c599b7fb76e732c980913832a93871c 306 PIRSF PIRSF026649 2 306 9.8E-114 T 09-03-2017 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 RG43_RS15305 6c599b7fb76e732c980913832a93871c 306 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 5 297 2.4E-122 T 09-03-2017 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 RG43_RS12325 6427017f4729b4a19be366c55b8ebc01 457 PIRSF PIRSF006603 4 453 3.7E-59 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 RG43_RS12325 6427017f4729b4a19be366c55b8ebc01 457 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 422 7.2E-127 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 RG43_RS12325 6427017f4729b4a19be366c55b8ebc01 457 Pfam PF01554 MatE 17 177 1.9E-41 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 RG43_RS12325 6427017f4729b4a19be366c55b8ebc01 457 Pfam PF01554 MatE 244 405 2.4E-38 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 RG43_RS12325 6427017f4729b4a19be366c55b8ebc01 457 Hamap MF_00400 Multidrug resistance protein MdtK [mdtK]. 1 457 54.69 T 09-03-2017 IPR022913 Multidrug resistance protein MdtK RG43_RS05155 bb1cfad3d3e7451672c6ce09a6c4bbde 298 SUPERFAMILY SSF46785 8 87 7.62E-14 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS05155 bb1cfad3d3e7451672c6ce09a6c4bbde 298 Gene3D G3DSA:1.10.10.10 7 87 1.0E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS05155 bb1cfad3d3e7451672c6ce09a6c4bbde 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 5.9E-12 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS05155 bb1cfad3d3e7451672c6ce09a6c4bbde 298 Gene3D G3DSA:3.40.190.10 188 261 1.2E-4 T 09-03-2017 RG43_RS05155 bb1cfad3d3e7451672c6ce09a6c4bbde 298 SUPERFAMILY SSF53850 104 283 7.8E-13 T 09-03-2017 RG43_RS05155 bb1cfad3d3e7451672c6ce09a6c4bbde 298 Pfam PF03466 LysR substrate binding domain 89 281 4.4E-11 T 09-03-2017 IPR005119 LysR, substrate-binding RG43_RS13490 038f8c8c6ff2e970f6ff80aa66afe4db 447 Pfam PF07063 Domain of unknown function (DUF1338) 9 401 6.6E-121 T 09-03-2017 IPR009770 Domain of unknown function DUF1338 RG43_RS13490 038f8c8c6ff2e970f6ff80aa66afe4db 447 SMART SM01150 11 401 9.1E-231 T 09-03-2017 IPR009770 Domain of unknown function DUF1338 RG43_RS08135 10c02a589a7eba998fe90721c892248e 269 Pfam PF01925 Sulfite exporter TauE/SafE 18 253 3.2E-42 T 09-03-2017 IPR002781 Transmembrane protein TauE-like GO:0016021 RG43_RS11850 79ee4bbbb25c4298b2c819612dfc34f4 185 SUPERFAMILY SSF69118 3 173 1.53E-37 T 09-03-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 RG43_RS11850 79ee4bbbb25c4298b2c819612dfc34f4 185 Pfam PF02627 Carboxymuconolactone decarboxylase family 52 122 5.5E-7 T 09-03-2017 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RG43_RS11850 79ee4bbbb25c4298b2c819612dfc34f4 185 Gene3D G3DSA:1.20.1290.10 30 175 1.1E-38 T 09-03-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 RG43_RS15595 7658312c5346998d7f996db05fc34bce 27 Pfam PF12759 InsA C-terminal domain 3 27 1.9E-15 T 09-03-2017 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain RG43_RS07025 7658312c5346998d7f996db05fc34bce 27 Pfam PF12759 InsA C-terminal domain 3 27 1.9E-15 T 09-03-2017 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain RG43_RS16815 7658312c5346998d7f996db05fc34bce 27 Pfam PF12759 InsA C-terminal domain 3 27 1.9E-15 T 09-03-2017 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain RG43_RS11340 7658312c5346998d7f996db05fc34bce 27 Pfam PF12759 InsA C-terminal domain 3 27 1.9E-15 T 09-03-2017 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain RG43_RS18655 4b1992cc739bbd4abc2c29024c419fc9 53 Pfam PF10689 Protein of unknown function (DUF2496) 2 44 7.7E-24 T 09-03-2017 IPR019630 Protein of unknown function DUF2496, YbaM-related RG43_RS17840 bc349f7f8df2734ffd8537ed0b956f81 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 24 132 3.4E-15 T 09-03-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RG43_RS17840 bc349f7f8df2734ffd8537ed0b956f81 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 46 238 4.3E-27 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS17840 bc349f7f8df2734ffd8537ed0b956f81 246 SUPERFAMILY SSF161098 24 223 1.1E-37 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS17840 bc349f7f8df2734ffd8537ed0b956f81 246 Gene3D G3DSA:1.10.3720.10 23 238 7.9E-43 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS18300 53e30d293ca90890a4fe4e4794346a7e 99 SUPERFAMILY SSF56349 7 89 2.24E-9 T 09-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RG43_RS18300 53e30d293ca90890a4fe4e4794346a7e 99 Gene3D G3DSA:1.10.443.10 9 92 5.4E-9 T 09-03-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RG43_RS18300 53e30d293ca90890a4fe4e4794346a7e 99 Pfam PF00589 Phage integrase family 9 89 4.4E-15 T 09-03-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RG43_RS00600 cca4387aba1e034bb9642ad3ab52da5d 342 SUPERFAMILY SSF53448 25 296 1.94E-56 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS00600 cca4387aba1e034bb9642ad3ab52da5d 342 Gene3D G3DSA:3.90.550.10 24 295 3.7E-62 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases RG43_RS00600 cca4387aba1e034bb9642ad3ab52da5d 342 Pfam PF01501 Glycosyl transferase family 8 25 276 1.0E-62 T 09-03-2017 IPR002495 Glycosyl transferase, family 8 GO:0016757 RG43_RS00600 cca4387aba1e034bb9642ad3ab52da5d 342 Pfam PF08437 Glycosyl transferase family 8 C-terminal 278 334 3.8E-19 T 09-03-2017 IPR013645 Glycosyl transferase, family 8, C-terminal GO:0008918|GO:0009103 RG43_RS05970 a2b4e50e293814dbe4ff8ba375d47473 425 Gene3D G3DSA:1.20.1250.20 215 408 8.5E-8 T 09-03-2017 RG43_RS05970 a2b4e50e293814dbe4ff8ba375d47473 425 Pfam PF07690 Major Facilitator Superfamily 26 333 2.5E-23 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS05970 a2b4e50e293814dbe4ff8ba375d47473 425 Gene3D G3DSA:1.20.1250.20 8 197 5.6E-21 T 09-03-2017 RG43_RS05970 a2b4e50e293814dbe4ff8ba375d47473 425 SUPERFAMILY SSF103473 5 413 1.19E-39 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS03525 526a9a87c0b296938df0600875175b03 227 Pfam PF02698 DUF218 domain 61 173 5.5E-20 T 09-03-2017 IPR003848 Domain of unknown function DUF218 RG43_RS03525 526a9a87c0b296938df0600875175b03 227 Gene3D G3DSA:3.40.50.620 71 169 1.2E-10 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS12600 904fc27d4e16e4dd6bfb91b456e27e54 502 Pfam PF06097 Bacterial protein of unknown function (DUF945) 1 480 3.4E-140 T 09-03-2017 IPR010352 Protein of unknown function DUF945 RG43_RS00430 7fab04447615d27d0cf4992ec8c67b4b 363 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 9 335 2.2E-93 T 09-03-2017 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 RG43_RS00430 7fab04447615d27d0cf4992ec8c67b4b 363 Pfam PF02378 Phosphotransferase system, EIIC 19 214 4.4E-10 T 09-03-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 RG43_RS01500 6f0f7dd96cefa89d272619b3bc13a515 277 SUPERFAMILY SSF161098 66 255 3.43E-19 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS01500 6f0f7dd96cefa89d272619b3bc13a515 277 Gene3D G3DSA:1.10.3720.10 62 269 5.0E-18 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS01500 6f0f7dd96cefa89d272619b3bc13a515 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 271 8.2E-29 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS01500 6f0f7dd96cefa89d272619b3bc13a515 277 TIGRFAM TIGR02790 nickel_nikC: nickel ABC transporter, permease subunit NikC 12 268 3.6E-120 T 09-03-2017 IPR014157 Nickel ABC transporter, permease subunit NikC GO:0015099|GO:0016021 RG43_RS10645 27619c097decf57d32eafa41c081e2fc 305 Pfam PF17151 Periplasmic sensor domain 35 220 2.4E-83 T 09-03-2017 IPR033416 Periplasmic sensor domain CHASE7 RG43_RS24335 21d9ddbca9c8fbeac4318d7f5b00a7cc 247 Pfam PF05944 Phage small terminase subunit 35 164 5.8E-45 T 09-03-2017 IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 RG43_RS20105 a4d7e5f833266e5f0810ef37fa546aca 157 PIRSF PIRSF009103 1 154 1.5E-57 T 09-03-2017 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 RG43_RS20105 a4d7e5f833266e5f0810ef37fa546aca 157 Pfam PF08816 Inhibitor of vertebrate lysozyme (Ivy) 39 152 1.2E-34 T 09-03-2017 RG43_RS20105 a4d7e5f833266e5f0810ef37fa546aca 157 Gene3D G3DSA:3.40.1420.10 29 157 3.3E-57 T 09-03-2017 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 RG43_RS20105 a4d7e5f833266e5f0810ef37fa546aca 157 SUPERFAMILY SSF89872 31 156 1.16E-49 T 09-03-2017 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 RG43_RS20840 2c4520733c260ec9b7322f69ac3b5edd 264 Gene3D G3DSA:3.20.20.60 1 264 9.0E-111 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RG43_RS20840 2c4520733c260ec9b7322f69ac3b5edd 264 SUPERFAMILY SSF51621 4 263 1.36E-104 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RG43_RS20840 2c4520733c260ec9b7322f69ac3b5edd 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 42.112 T 09-03-2017 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 RG43_RS20840 2c4520733c260ec9b7322f69ac3b5edd 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 264 7.4E-131 T 09-03-2017 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 RG43_RS20840 2c4520733c260ec9b7322f69ac3b5edd 264 PIRSF PIRSF000388 1 264 9.3E-98 T 09-03-2017 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 RG43_RS20840 2c4520733c260ec9b7322f69ac3b5edd 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 4 258 5.0E-106 T 09-03-2017 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 RG43_RS24570 cc26acc388a4953c7a3c5f1d9ddcfd2b 103 PIRSF PIRSF039032 1 103 3.6E-36 T 09-03-2017 IPR009387 Toxin HigB-2 RG43_RS08920 8b11ea90a16f95b2dcdb20c3693b728a 237 Pfam PF01569 PAP2 superfamily 133 207 1.3E-8 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RG43_RS08920 8b11ea90a16f95b2dcdb20c3693b728a 237 Gene3D G3DSA:1.20.144.10 23 205 4.4E-13 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RG43_RS08920 8b11ea90a16f95b2dcdb20c3693b728a 237 SMART SM00014 94 210 3.6E-23 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RG43_RS08920 8b11ea90a16f95b2dcdb20c3693b728a 237 SUPERFAMILY SSF48317 2 226 1.53E-36 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RG43_RS08920 8b11ea90a16f95b2dcdb20c3693b728a 237 Hamap MF_01945 Lipid A 1-diphosphate synthase [lpxT]. 1 233 41.811 T 09-03-2017 IPR032908 Lipid A 1-diphosphate synthase GO:0005886|GO:0043165|GO:0050380 RG43_RS13345 44103b5daca9ce5cd4c480679a8d048c 149 Pfam PF04657 Putative inner membrane exporter, YdcZ 6 143 3.2E-21 T 09-03-2017 IPR006750 Putative inner membrane exporter, YdcZ RG43_RS21845 97ff7488243d2528c78672777b1fbc1d 129 Pfam PF01042 Endoribonuclease L-PSP 20 123 9.8E-24 T 09-03-2017 IPR006175 YjgF/YER057c/UK114 family RG43_RS21845 97ff7488243d2528c78672777b1fbc1d 129 Gene3D G3DSA:3.30.1330.40 15 125 2.6E-30 T 09-03-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RG43_RS21845 97ff7488243d2528c78672777b1fbc1d 129 SUPERFAMILY SSF55298 17 125 2.36E-30 T 09-03-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RG43_RS26565 41cd95fed8352133b976830ca3ed6a6f 219 Pfam PF09335 SNARE associated Golgi protein 48 173 9.5E-19 T 09-03-2017 IPR032816 SNARE associated Golgi protein RG43_RS04190 41cd95fed8352133b976830ca3ed6a6f 219 Pfam PF09335 SNARE associated Golgi protein 48 173 9.5E-19 T 09-03-2017 IPR032816 SNARE associated Golgi protein RG43_RS16880 d4d7248607ae16faf2c780a54b53e72d 140 TIGRFAM TIGR01674 phage_lambda_G: phage minor tail protein G 1 135 8.1E-63 T 09-03-2017 IPR010027 Bacteriophage lambda, GpG, minor tail RG43_RS16880 d4d7248607ae16faf2c780a54b53e72d 140 Pfam PF06894 Bacteriophage lambda tail assembly chaperone, TAC, protein G 1 125 5.0E-59 T 09-03-2017 IPR010027 Bacteriophage lambda, GpG, minor tail RG43_RS07275 5e2777069dc3cfa1cc66e785831ad0dd 63 Pfam PF11119 Protein of unknown function (DUF2633) 9 62 1.1E-30 T 09-03-2017 IPR022576 Protein of unknown function DUF2633 RG43_RS07275 5e2777069dc3cfa1cc66e785831ad0dd 63 ProDom PD053432 MEMBRANE TRANSMEMBRANE YFGG INNER EXPORTED Y1396 PRECURSOR SIGNAL 1 63 2.0E-29 T 09-03-2017 IPR022576 Protein of unknown function DUF2633 RG43_RS00610 4a8f21085ae1f89c888639c2c7da5167 417 Pfam PF04932 O-Antigen ligase 201 356 2.0E-6 T 09-03-2017 IPR007016 O-antigen ligase-related RG43_RS07480 6519f100bac472d775c761935471a77f 267 Gene3D G3DSA:1.20.1200.10 95 248 1.3E-11 T 09-03-2017 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 RG43_RS07480 6519f100bac472d775c761935471a77f 267 Pfam PF01923 Cobalamin adenosyltransferase 95 246 1.6E-12 T 09-03-2017 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 RG43_RS07480 6519f100bac472d775c761935471a77f 267 PIRSF PIRSF012294 1 255 2.5E-112 T 09-03-2017 IPR009194 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, EutT-type GO:0005524|GO:0006580|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 RG43_RS07480 6519f100bac472d775c761935471a77f 267 SUPERFAMILY SSF89028 93 250 6.67E-13 T 09-03-2017 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 RG43_RS00790 a5ead8290394dfa4cd3f373b4596d4ae 107 PIRSF PIRSF028770 1 107 2.5E-60 T 09-03-2017 IPR011223 Uncharacterised conserved protein UCP028770 RG43_RS00790 a5ead8290394dfa4cd3f373b4596d4ae 107 Pfam PF11742 Protein of unknown function (DUF3302) 3 78 3.1E-42 T 09-03-2017 IPR011223 Uncharacterised conserved protein UCP028770 RG43_RS24790 65d5288c2db8222ece4e8f0eb59d4d79 443 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 335 347 - T 09-03-2017 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site RG43_RS24790 65d5288c2db8222ece4e8f0eb59d4d79 443 SUPERFAMILY SSF55920 163 438 1.83E-57 T 09-03-2017 IPR000994 Peptidase M24, structural domain RG43_RS24790 65d5288c2db8222ece4e8f0eb59d4d79 443 Hamap MF_01279 Xaa-Pro dipeptidase [pepQ]. 1 443 58.546 T 09-03-2017 IPR022846 Xaa-Pro dipeptidase GO:0016795 RG43_RS24790 65d5288c2db8222ece4e8f0eb59d4d79 443 Pfam PF00557 Metallopeptidase family M24 168 430 3.2E-47 T 09-03-2017 IPR000994 Peptidase M24, structural domain RG43_RS24790 65d5288c2db8222ece4e8f0eb59d4d79 443 Gene3D G3DSA:3.90.230.10 161 439 3.2E-56 T 09-03-2017 IPR000994 Peptidase M24, structural domain RG43_RS14905 2da4f50be2cee1134a6ff6ffaa0c724f 264 SUPERFAMILY SSF161098 3 254 5.98E-56 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS14905 2da4f50be2cee1134a6ff6ffaa0c724f 264 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 253 6.3E-20 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS14905 2da4f50be2cee1134a6ff6ffaa0c724f 264 Gene3D G3DSA:1.10.3720.10 5 256 4.7E-56 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS11585 ab261d291bc551cd9cdafd642adbe3ec 59 Hamap MF_00507 UPF0181 protein YoaH [yoaH]. 1 58 20.778 T 09-03-2017 IPR005371 Uncharacterised protein family UPF0181 RG43_RS11585 ab261d291bc551cd9cdafd642adbe3ec 59 ProDom PD026807 UPF0181 YOAH YPTB1650 VV20310 VPA0916 VCA0569 YPO1774/Y2534/YP1619 PLU2693 VVA0806 PM0480 1 48 5.0E-20 T 09-03-2017 IPR005371 Uncharacterised protein family UPF0181 RG43_RS11585 ab261d291bc551cd9cdafd642adbe3ec 59 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 49 1.0E-28 T 09-03-2017 IPR005371 Uncharacterised protein family UPF0181 RG43_RS19045 3390bc207a3de07481c6f711e8fbace5 225 ProDom PD037589 AROM ARO OPERON REGULATED BY AROR BIOSYNTHESIS TRANSCRIPTION AMINO AROMATIC 5 223 1.0E-121 T 09-03-2017 IPR010843 Uncharacterised protein family AroM RG43_RS19045 3390bc207a3de07481c6f711e8fbace5 225 Pfam PF07302 AroM protein 5 224 2.7E-70 T 09-03-2017 IPR010843 Uncharacterised protein family AroM RG43_RS15845 32c9c7180ab6dbc543ed30fb21b124b5 546 Pfam PF02470 MlaD protein 158 217 1.3E-7 T 09-03-2017 IPR003399 Mce/MlaD RG43_RS15845 32c9c7180ab6dbc543ed30fb21b124b5 546 Pfam PF02470 MlaD protein 42 133 5.3E-9 T 09-03-2017 IPR003399 Mce/MlaD RG43_RS15845 32c9c7180ab6dbc543ed30fb21b124b5 546 Pfam PF02470 MlaD protein 285 389 1.2E-14 T 09-03-2017 IPR003399 Mce/MlaD RG43_RS22735 44dd97e62bb9f56d0ad15dce26288de8 104 ProDom PD069399 MEMBRANE INNER YJEO SIMILAR INTEGRAL ORF22 ESCHERICHIA TRANSMEMBRANE COLI 12 103 2.0E-38 T 09-03-2017 IPR022553 Protein of unknown function DUF2645 RG43_RS22735 44dd97e62bb9f56d0ad15dce26288de8 104 Pfam PF10840 Protein of unknown function (DUF2645) 7 103 3.2E-37 T 09-03-2017 IPR022553 Protein of unknown function DUF2645 RG43_RS16925 2d98bf35023db83d840890b8aa0f9dc7 533 Pfam PF05136 Phage portal protein, lambda family 32 400 5.2E-94 T 09-03-2017 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 RG43_RS16925 2d98bf35023db83d840890b8aa0f9dc7 533 TIGRFAM TIGR01539 portal_lambda: phage portal protein, lambda family 30 510 9.7E-141 T 09-03-2017 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 RG43_RS17570 1d7cf82b1f1403490607abb92a2bcae2 80 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 5 45 1.3E-10 T 09-03-2017 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 RG43_RS06650 03ae9ea72eed622c6dc0e9b5150da697 288 Pfam PF01578 Cytochrome C assembly protein 62 286 1.4E-44 T 09-03-2017 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 RG43_RS03930 ef37d090b0e3f0ec1e9c62d9d8830f8b 209 Pfam PF07290 Protein of unknown function (DUF1449) 8 202 7.2E-75 T 09-03-2017 IPR010840 Protein of unknown function DUF1449 RG43_RS26305 ef37d090b0e3f0ec1e9c62d9d8830f8b 209 Pfam PF07290 Protein of unknown function (DUF1449) 8 202 7.2E-75 T 09-03-2017 IPR010840 Protein of unknown function DUF1449 RG43_RS25765 14cc7c3a30d651857f5c0fbe80b7a9e9 120 Pfam PF02656 Domain of unknown function (DUF202) 12 65 5.5E-10 T 09-03-2017 IPR003807 Domain of unknown function DUF202 RG43_RS25765 14cc7c3a30d651857f5c0fbe80b7a9e9 120 ProDom PD277113 MEMBRANE INNER YIDG TRANSMEMBRANE STY3975 RV2273/MT2334 MB2296 12 71 1.0E-29 T 09-03-2017 IPR020264 Uncharacterised protein family YidG RG43_RS06295 8d43b9e2dda6ee670f2d97a1ff4e2322 156 Pfam PF01750 Hydrogenase maturation protease 23 140 1.2E-29 T 09-03-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 RG43_RS06295 8d43b9e2dda6ee670f2d97a1ff4e2322 156 TIGRFAM TIGR00142 hycI: hydrogenase maturation peptidase HycI 3 147 1.5E-68 T 09-03-2017 IPR004420 Peptidase A31, hydrogenase maturation protease HycI GO:0008233 RG43_RS06295 8d43b9e2dda6ee670f2d97a1ff4e2322 156 PRINTS PR00446 Hydrogen uptake protein signature 3 15 9.5E-13 T 09-03-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 RG43_RS06295 8d43b9e2dda6ee670f2d97a1ff4e2322 156 PRINTS PR00446 Hydrogen uptake protein signature 15 26 9.5E-13 T 09-03-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 RG43_RS06295 8d43b9e2dda6ee670f2d97a1ff4e2322 156 PRINTS PR00446 Hydrogen uptake protein signature 56 66 9.5E-13 T 09-03-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 RG43_RS06295 8d43b9e2dda6ee670f2d97a1ff4e2322 156 PRINTS PR00446 Hydrogen uptake protein signature 67 83 9.5E-13 T 09-03-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 RG43_RS06295 8d43b9e2dda6ee670f2d97a1ff4e2322 156 PRINTS PR00446 Hydrogen uptake protein signature 33 50 9.5E-13 T 09-03-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 RG43_RS06295 8d43b9e2dda6ee670f2d97a1ff4e2322 156 Gene3D G3DSA:3.40.50.1450 5 142 2.6E-24 T 09-03-2017 IPR023430 Peptidase HybD-like domain RG43_RS06295 8d43b9e2dda6ee670f2d97a1ff4e2322 156 SUPERFAMILY SSF53163 4 152 4.45E-35 T 09-03-2017 IPR023430 Peptidase HybD-like domain RG43_RS06295 8d43b9e2dda6ee670f2d97a1ff4e2322 156 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 5 140 5.8E-35 T 09-03-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 RG43_RS00045 15a208c13cbd25b5e7b31694dec8b1ca 294 SUPERFAMILY SSF58100 4 294 1.44E-169 T 09-03-2017 RG43_RS00045 15a208c13cbd25b5e7b31694dec8b1ca 294 Gene3D G3DSA:1.20.1170.10 4 294 7.7E-172 T 09-03-2017 RG43_RS00045 15a208c13cbd25b5e7b31694dec8b1ca 294 Pfam PF06109 Haemolysin E (HlyE) 12 291 5.8E-92 T 09-03-2017 IPR027018 Hemolysin E GO:0009405|GO:0044179 RG43_RS21615 f461a173cff87b17162b1764f384757a 94 Pfam PF01381 Helix-turn-helix 35 79 1.5E-9 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RG43_RS21615 f461a173cff87b17162b1764f384757a 94 Gene3D G3DSA:1.10.260.40 34 85 7.8E-17 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS21615 f461a173cff87b17162b1764f384757a 94 SUPERFAMILY SSF47413 35 82 1.18E-10 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS21615 f461a173cff87b17162b1764f384757a 94 SMART SM00530 34 88 1.8E-6 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RG43_RS21505 a8df73b7de5dd9059d3fa8d0318f2017 476 PRINTS PR00175 Sodium/alanine symporter signature 206 225 6.1E-54 T 09-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RG43_RS21505 a8df73b7de5dd9059d3fa8d0318f2017 476 PRINTS PR00175 Sodium/alanine symporter signature 349 371 6.1E-54 T 09-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RG43_RS21505 a8df73b7de5dd9059d3fa8d0318f2017 476 PRINTS PR00175 Sodium/alanine symporter signature 87 109 6.1E-54 T 09-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RG43_RS21505 a8df73b7de5dd9059d3fa8d0318f2017 476 PRINTS PR00175 Sodium/alanine symporter signature 178 196 6.1E-54 T 09-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RG43_RS21505 a8df73b7de5dd9059d3fa8d0318f2017 476 PRINTS PR00175 Sodium/alanine symporter signature 410 430 6.1E-54 T 09-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RG43_RS21505 a8df73b7de5dd9059d3fa8d0318f2017 476 PRINTS PR00175 Sodium/alanine symporter signature 303 321 6.1E-54 T 09-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RG43_RS21505 a8df73b7de5dd9059d3fa8d0318f2017 476 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 441 3.2E-166 T 09-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RG43_RS21505 a8df73b7de5dd9059d3fa8d0318f2017 476 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 87 102 - T 09-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RG43_RS21505 a8df73b7de5dd9059d3fa8d0318f2017 476 Pfam PF01235 Sodium:alanine symporter family 52 453 1.7E-141 T 09-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RG43_RS10075 907ef3d36cec2b858bb4d54e5b86bc80 247 Pfam PF02654 Cobalamin-5-phosphate synthase 9 244 6.3E-54 T 09-03-2017 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 RG43_RS10075 907ef3d36cec2b858bb4d54e5b86bc80 247 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 247 48.973 T 09-03-2017 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 RG43_RS10075 907ef3d36cec2b858bb4d54e5b86bc80 247 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 1 246 7.8E-93 T 09-03-2017 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 RG43_RS01890 a92cc032b8a01cb91bacd45a79b194b6 78 Pfam PF09012 FeoC like transcriptional regulator 3 69 1.2E-15 T 09-03-2017 IPR015102 Transcriptional regulator HTH-type, FeoC RG43_RS01890 a92cc032b8a01cb91bacd45a79b194b6 78 Gene3D G3DSA:1.10.10.10 6 55 2.4E-4 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS01890 a92cc032b8a01cb91bacd45a79b194b6 78 SUPERFAMILY SSF46785 1 76 1.37E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS01890 a92cc032b8a01cb91bacd45a79b194b6 78 Hamap MF_01586 Probable [Fe-S]-dependent transcriptional repressor [feoC]. 1 78 24.462 T 09-03-2017 IPR023732 Probable [Fe-S]-dependent transcriptional repressor RG43_RS21370 52ad4e922b3565bdf022e3b8489bf620 405 Gene3D G3DSA:3.30.1540.10 227 310 1.2E-5 T 09-03-2017 RG43_RS21370 52ad4e922b3565bdf022e3b8489bf620 405 Pfam PF02515 CoA-transferase family III 12 378 4.9E-95 T 09-03-2017 IPR003673 CoA-transferase family III GO:0003824 RG43_RS21370 52ad4e922b3565bdf022e3b8489bf620 405 Gene3D G3DSA:3.40.50.10540 9 216 7.7E-77 T 09-03-2017 IPR023606 CoA-transferase family III domain RG43_RS21370 52ad4e922b3565bdf022e3b8489bf620 405 Gene3D G3DSA:3.40.50.10540 311 401 7.7E-77 T 09-03-2017 IPR023606 CoA-transferase family III domain RG43_RS21370 52ad4e922b3565bdf022e3b8489bf620 405 SUPERFAMILY SSF89796 5 401 2.49E-100 T 09-03-2017 IPR023606 CoA-transferase family III domain RG43_RS21370 52ad4e922b3565bdf022e3b8489bf620 405 Hamap MF_01050 L-carnitine CoA-transferase [caiB]. 1 405 99.994 T 09-03-2017 IPR023452 L-carnitine CoA-transferase CaiB GO:0009437|GO:0016782 RG43_RS08785 c4821747bde31b0d2d1dd175615bd789 220 Pfam PF03379 CcmB protein 3 217 8.5E-92 T 09-03-2017 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 RG43_RS08785 c4821747bde31b0d2d1dd175615bd789 220 PIRSF PIRSF002764 1 220 1.8E-83 T 09-03-2017 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria RG43_RS08785 c4821747bde31b0d2d1dd175615bd789 220 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 6 216 1.4E-95 T 09-03-2017 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria RG43_RS08785 c4821747bde31b0d2d1dd175615bd789 220 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 27 48 5.0E-72 T 09-03-2017 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 RG43_RS08785 c4821747bde31b0d2d1dd175615bd789 220 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 193 216 5.0E-72 T 09-03-2017 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 RG43_RS08785 c4821747bde31b0d2d1dd175615bd789 220 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 53 70 5.0E-72 T 09-03-2017 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 RG43_RS08785 c4821747bde31b0d2d1dd175615bd789 220 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 156 175 5.0E-72 T 09-03-2017 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 RG43_RS08785 c4821747bde31b0d2d1dd175615bd789 220 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 76 99 5.0E-72 T 09-03-2017 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 RG43_RS08785 c4821747bde31b0d2d1dd175615bd789 220 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 101 119 5.0E-72 T 09-03-2017 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 RG43_RS00915 a823fe0c66cdac5ff88161155003ca33 440 SUPERFAMILY SSF51658 4 438 5.97E-172 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain RG43_RS00915 a823fe0c66cdac5ff88161155003ca33 440 Gene3D G3DSA:3.20.20.150 3 439 6.0E-212 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain RG43_RS00915 a823fe0c66cdac5ff88161155003ca33 440 PRINTS PR00688 Xylose isomerase signature 133 153 9.2E-86 T 09-03-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 RG43_RS00915 a823fe0c66cdac5ff88161155003ca33 440 PRINTS PR00688 Xylose isomerase signature 229 253 9.2E-86 T 09-03-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 RG43_RS00915 a823fe0c66cdac5ff88161155003ca33 440 PRINTS PR00688 Xylose isomerase signature 156 175 9.2E-86 T 09-03-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 RG43_RS00915 a823fe0c66cdac5ff88161155003ca33 440 PRINTS PR00688 Xylose isomerase signature 180 201 9.2E-86 T 09-03-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 RG43_RS00915 a823fe0c66cdac5ff88161155003ca33 440 PRINTS PR00688 Xylose isomerase signature 300 311 9.2E-86 T 09-03-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 RG43_RS00915 a823fe0c66cdac5ff88161155003ca33 440 PRINTS PR00688 Xylose isomerase signature 271 298 9.2E-86 T 09-03-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 RG43_RS00915 a823fe0c66cdac5ff88161155003ca33 440 PRINTS PR00688 Xylose isomerase signature 92 114 9.2E-86 T 09-03-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 RG43_RS00915 a823fe0c66cdac5ff88161155003ca33 440 PRINTS PR00688 Xylose isomerase signature 333 344 9.2E-86 T 09-03-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 RG43_RS00915 a823fe0c66cdac5ff88161155003ca33 440 PRINTS PR00688 Xylose isomerase signature 207 226 9.2E-86 T 09-03-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 RG43_RS00915 a823fe0c66cdac5ff88161155003ca33 440 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 4 437 3.2E-220 T 09-03-2017 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 RG43_RS00915 a823fe0c66cdac5ff88161155003ca33 440 Hamap MF_00455 Xylose isomerase [xylA]. 11 437 53.979 T 09-03-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 RG43_RS02275 f7eedf512dcd2ecef19d0652fbafd476 64 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 51 1.2E-14 T 09-03-2017 IPR007419 BFD-like [2Fe-2S]-binding domain RG43_RS12880 35b1c7934308c66f9597dc4890ca4134 221 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 8 213 1.1E-36 T 09-03-2017 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 RG43_RS12880 35b1c7934308c66f9597dc4890ca4134 221 Pfam PF01914 MarC family integral membrane protein 5 217 1.8E-71 T 09-03-2017 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 RG43_RS15120 53fd3b3ffa801fe18b080a169dc0e83d 173 Pfam PF02620 Uncharacterized ACR, COG1399 61 171 1.6E-19 T 09-03-2017 IPR003772 Protein of unknown function DUF177 RG43_RS19315 45036a9b5bd9e830c17e694ef6e30e19 419 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 11 397 6.8E-83 T 09-03-2017 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 RG43_RS18785 6107950a8bfdc532059d2b072baf9356 623 Pfam PF13624 SurA N-terminal domain 1 165 2.5E-54 T 09-03-2017 RG43_RS18785 6107950a8bfdc532059d2b072baf9356 623 SUPERFAMILY SSF54534 225 355 3.34E-23 T 09-03-2017 RG43_RS18785 6107950a8bfdc532059d2b072baf9356 623 Gene3D G3DSA:1.10.3120.10 43 122 9.0E-4 T 09-03-2017 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 RG43_RS18785 6107950a8bfdc532059d2b072baf9356 623 Gene3D G3DSA:3.10.50.40 258 379 2.1E-29 T 09-03-2017 RG43_RS18785 6107950a8bfdc532059d2b072baf9356 623 SUPERFAMILY SSF109998 203 239 4.32E-38 T 09-03-2017 IPR027304 Trigger factor/SurA domain RG43_RS18785 6107950a8bfdc532059d2b072baf9356 623 SUPERFAMILY SSF109998 39 169 4.32E-38 T 09-03-2017 IPR027304 Trigger factor/SurA domain RG43_RS18785 6107950a8bfdc532059d2b072baf9356 623 Pfam PF13145 PPIC-type PPIASE domain 247 369 4.1E-24 T 09-03-2017 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 RG43_RS18785 6107950a8bfdc532059d2b072baf9356 623 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 295 316 - T 09-03-2017 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-936440 RG43_RS02080 1e11ef72011f96bc70cbc16ae9f712a8 117 Pfam PF10941 Protein of unknown function DUF2620 2 116 6.8E-49 T 09-03-2017 IPR021238 Protein of unknown function DUF2620 RG43_RS13870 e9921b39277c0b42ae747f7a86edb6b4 74 Pfam PF06667 Phage shock protein B 3 73 1.6E-32 T 09-03-2017 IPR009554 Phage shock protein B GO:0006355|GO:0009271 RG43_RS13870 e9921b39277c0b42ae747f7a86edb6b4 74 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 74 1.1E-33 T 09-03-2017 IPR009554 Phage shock protein B GO:0006355|GO:0009271 RG43_RS07665 5a4ed98dc401bc0eedc9daac62cde7c2 253 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 15 231 2.3E-44 T 09-03-2017 RG43_RS07665 5a4ed98dc401bc0eedc9daac62cde7c2 253 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 9 249 29.262 T 09-03-2017 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 RG43_RS21870 64ebf211c2df241d1e2cc73dd08a01e7 67 Pfam PF04328 Protein of unknown function (DUF466) 5 67 8.0E-28 T 09-03-2017 IPR007423 Protein of unknown function DUF466 RG43_RS00890 569cf1feac98281f8232aeb1a75b1cc6 274 SMART SM00047 127 256 9.6E-42 T 09-03-2017 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 RG43_RS00890 569cf1feac98281f8232aeb1a75b1cc6 274 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 142 267 2.0E-16 T 09-03-2017 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 RG43_RS16690 9cc81d16a4ada6aa83fe23a5941d98e1 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 290 309 2.3E-6 T 09-03-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RG43_RS16690 9cc81d16a4ada6aa83fe23a5941d98e1 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 253 277 2.3E-6 T 09-03-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RG43_RS16690 9cc81d16a4ada6aa83fe23a5941d98e1 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 310 329 2.3E-6 T 09-03-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RG43_RS16690 9cc81d16a4ada6aa83fe23a5941d98e1 368 Pfam PF12698 ABC-2 family transporter protein 25 358 6.5E-49 T 09-03-2017 RG43_RS22300 d29caf3d891e07fc006be50965ca02db 450 SUPERFAMILY SSF111283 17 449 1.44E-133 T 09-03-2017 RG43_RS22300 d29caf3d891e07fc006be50965ca02db 450 Pfam PF01523 Putative modulator of DNA gyrase 36 326 7.9E-55 T 09-03-2017 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 RG43_RS05315 0dde24f49f3c3986ad741c0ec42a87ad 577 SUPERFAMILY SSF64182 48 465 2.62E-117 T 09-03-2017 RG43_RS05315 0dde24f49f3c3986ad741c0ec42a87ad 577 Pfam PF01368 DHH family 74 207 8.4E-11 T 09-03-2017 IPR001667 DDH domain RG43_RS05315 0dde24f49f3c3986ad741c0ec42a87ad 577 Pfam PF02272 DHHA1 domain 382 449 4.2E-16 T 09-03-2017 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 RG43_RS05315 0dde24f49f3c3986ad741c0ec42a87ad 577 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 24 573 1.3E-169 T 09-03-2017 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 RG43_RS15240 868dc8d0c82e8d87ca65ae7849b70bb2 194 Gene3D G3DSA:3.40.630.30 9 186 8.9E-46 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS15240 868dc8d0c82e8d87ca65ae7849b70bb2 194 Pfam PF13302 Acetyltransferase (GNAT) domain 17 162 5.1E-19 T 09-03-2017 IPR000182 GNAT domain GO:0008080 RG43_RS15240 868dc8d0c82e8d87ca65ae7849b70bb2 194 SUPERFAMILY SSF55729 12 185 6.07E-42 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS22550 0373f0dcb85ad5deb6a8d78e37a5b8da 101 SUPERFAMILY SSF52794 3 95 7.59E-18 T 09-03-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RG43_RS22550 0373f0dcb85ad5deb6a8d78e37a5b8da 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 4 79 1.1E-13 T 09-03-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RG43_RS22550 0373f0dcb85ad5deb6a8d78e37a5b8da 101 Gene3D G3DSA:3.40.50.270 4 93 1.4E-17 T 09-03-2017 RG43_RS05145 b6e6f5c6190ad17c07279c5cdab24977 211 TIGRFAM TIGR00948 2a75: L-lysine exporter 15 191 9.4E-73 T 09-03-2017 IPR004777 L-lysine exporter/arginine exporter GO:0016021 RG43_RS05145 b6e6f5c6190ad17c07279c5cdab24977 211 Pfam PF01810 LysE type translocator 14 201 3.4E-57 T 09-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RG43_RS05145 b6e6f5c6190ad17c07279c5cdab24977 211 Hamap MF_01901 Arginine exporter protein ArgO [argO]. 1 205 39.563 T 09-03-2017 IPR023445 Arginine exporter protein ArgO, enterobacteria GO:0015181|GO:0015809 RG43_RS04810 ed9f2fc2767e055d06e3b817f153fdbf 166 Pfam PF01527 Transposase 55 108 2.9E-7 T 09-03-2017 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RG43_RS04810 ed9f2fc2767e055d06e3b817f153fdbf 166 Gene3D G3DSA:1.10.10.60 61 152 1.1E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS04810 ed9f2fc2767e055d06e3b817f153fdbf 166 Gene3D G3DSA:1.10.10.60 7 56 5.2E-7 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS04810 ed9f2fc2767e055d06e3b817f153fdbf 166 SUPERFAMILY SSF46689 56 156 1.15E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS04810 ed9f2fc2767e055d06e3b817f153fdbf 166 SUPERFAMILY SSF46689 1 53 3.58E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS18690 12c7241ea3ff19fca3246f734db77c39 72 SUPERFAMILY SSF68989 2 72 9.94E-32 T 09-03-2017 IPR007985 Haemolysin expression modulating, HHA RG43_RS18690 12c7241ea3ff19fca3246f734db77c39 72 Gene3D G3DSA:1.20.1280.40 6 72 1.4E-37 T 09-03-2017 IPR007985 Haemolysin expression modulating, HHA RG43_RS18690 12c7241ea3ff19fca3246f734db77c39 72 Pfam PF05321 Haemolysin expression modulating protein 13 69 1.4E-33 T 09-03-2017 IPR007985 Haemolysin expression modulating, HHA RG43_RS23590 3b01b7aa56aebbf62a6c2b2f7df35303 543 TIGRFAM TIGR01013 2a58: sodium-dependent inorganic phosphate (Pi) transporter 67 520 2.9E-171 T 09-03-2017 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 RG43_RS23590 3b01b7aa56aebbf62a6c2b2f7df35303 543 Pfam PF02690 Na+/Pi-cotransporter 157 252 3.8E-8 T 09-03-2017 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 RG43_RS23590 3b01b7aa56aebbf62a6c2b2f7df35303 543 Pfam PF02690 Na+/Pi-cotransporter 13 147 1.8E-35 T 09-03-2017 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 RG43_RS23590 3b01b7aa56aebbf62a6c2b2f7df35303 543 SUPERFAMILY SSF109755 321 531 2.93E-23 T 09-03-2017 RG43_RS23590 3b01b7aa56aebbf62a6c2b2f7df35303 543 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 1 308 5.1E-137 T 09-03-2017 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 RG43_RS25300 a4c4ff7d036b31794f438746bc460e3d 32 Pfam PF08046 IlvGEDA operon leader peptide 1 32 1.5E-17 T 09-03-2017 IPR012567 IlvGEDA operon leader peptide GO:0009082 RG43_RS05540 ec3710bdce58c83c1c423dbf2ef76d99 237 Pfam PF03741 Integral membrane protein TerC family 17 203 2.1E-52 T 09-03-2017 IPR005496 Integral membrane protein TerC GO:0016021 RG43_RS09785 062d90037c34f1ec5f83d4a6a3a6f701 274 SUPERFAMILY SSF51735 2 266 4.29E-28 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS09785 062d90037c34f1ec5f83d4a6a3a6f701 274 Gene3D G3DSA:3.40.50.720 100 234 6.8E-12 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS09785 062d90037c34f1ec5f83d4a6a3a6f701 274 Gene3D G3DSA:3.40.50.720 2 99 1.1E-9 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS09785 062d90037c34f1ec5f83d4a6a3a6f701 274 Pfam PF01370 NAD dependent epimerase/dehydratase family 10 213 6.1E-10 T 09-03-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RG43_RS00105 c6429aeddd5c48fa872d0cdfcb48d5fe 137 Gene3D G3DSA:3.40.50.720 31 91 3.0E-11 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS07440 a5a4e1094fcde5c297a25a67ed20fe5f 347 Pfam PF06674 Protein of unknown function (DUF1176) 25 347 1.7E-98 T 09-03-2017 IPR009560 Protein of unknown function DUF1176 RG43_RS09480 237a2d1e7ded94cb925f65b16b262d8e 646 Gene3D G3DSA:1.10.510.10 112 223 1.8E-6 T 09-03-2017 RG43_RS09480 237a2d1e7ded94cb925f65b16b262d8e 646 SUPERFAMILY SSF56112 83 223 2.38E-11 T 09-03-2017 IPR011009 Protein kinase-like domain RG43_RS09480 237a2d1e7ded94cb925f65b16b262d8e 646 PIRSF PIRSF030823 1 646 0.0 T 09-03-2017 IPR016960 Uncharacterised conserved protein UCP030823, kinase, HhH DNA-binding RG43_RS09480 237a2d1e7ded94cb925f65b16b262d8e 646 Gene3D G3DSA:1.10.150.20 517 551 5.2E-4 T 09-03-2017 RG43_RS04835 e75851acd6919ca274deda6051b3b935 176 Gene3D G3DSA:2.60.40.1090 32 176 4.1E-13 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS04835 e75851acd6919ca274deda6051b3b935 176 Pfam PF00419 Fimbrial protein 33 175 6.5E-18 T 09-03-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RG43_RS04835 e75851acd6919ca274deda6051b3b935 176 SUPERFAMILY SSF49401 41 176 1.54E-19 T 09-03-2017 IPR008966 Adhesion domain RG43_RS04835 e75851acd6919ca274deda6051b3b935 176 PRINTS PR01613 Escherichia coli P pili tip fibrillum PapF protein signature 37 60 1.7E-104 T 09-03-2017 IPR005430 P pili tip fibrillum PapF protein GO:0009289|GO:0009405 RG43_RS04835 e75851acd6919ca274deda6051b3b935 176 PRINTS PR01613 Escherichia coli P pili tip fibrillum PapF protein signature 97 118 1.7E-104 T 09-03-2017 IPR005430 P pili tip fibrillum PapF protein GO:0009289|GO:0009405 RG43_RS04835 e75851acd6919ca274deda6051b3b935 176 PRINTS PR01613 Escherichia coli P pili tip fibrillum PapF protein signature 81 95 1.7E-104 T 09-03-2017 IPR005430 P pili tip fibrillum PapF protein GO:0009289|GO:0009405 RG43_RS04835 e75851acd6919ca274deda6051b3b935 176 PRINTS PR01613 Escherichia coli P pili tip fibrillum PapF protein signature 61 79 1.7E-104 T 09-03-2017 IPR005430 P pili tip fibrillum PapF protein GO:0009289|GO:0009405 RG43_RS04835 e75851acd6919ca274deda6051b3b935 176 PRINTS PR01613 Escherichia coli P pili tip fibrillum PapF protein signature 119 142 1.7E-104 T 09-03-2017 IPR005430 P pili tip fibrillum PapF protein GO:0009289|GO:0009405 RG43_RS04835 e75851acd6919ca274deda6051b3b935 176 PRINTS PR01613 Escherichia coli P pili tip fibrillum PapF protein signature 15 36 1.7E-104 T 09-03-2017 IPR005430 P pili tip fibrillum PapF protein GO:0009289|GO:0009405 RG43_RS04835 e75851acd6919ca274deda6051b3b935 176 PRINTS PR01613 Escherichia coli P pili tip fibrillum PapF protein signature 160 176 1.7E-104 T 09-03-2017 IPR005430 P pili tip fibrillum PapF protein GO:0009289|GO:0009405 RG43_RS04835 e75851acd6919ca274deda6051b3b935 176 PRINTS PR01613 Escherichia coli P pili tip fibrillum PapF protein signature 143 159 1.7E-104 T 09-03-2017 IPR005430 P pili tip fibrillum PapF protein GO:0009289|GO:0009405 RG43_RS25895 70458d33386e6d23bc65632fa0685533 140 ProDom PD054142 YEEW L0008-LIKE GENOME ECS4540 C4577 AEC77 ECS1407 Z5092 C1289 L0008 5 66 3.0E-26 T 09-03-2017 RG43_RS25895 70458d33386e6d23bc65632fa0685533 140 Pfam PF06117 Enterobacterial protein of unknown function (DUF957) 79 140 2.7E-39 T 09-03-2017 IPR009301 Protein of unknown function DUF957 RG43_RS12960 4e2c2eaa330d23092525bc9e770920ab 342 Pfam PF02653 Branched-chain amino acid transport system / permease component 39 301 2.3E-44 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RG43_RS07595 636b6d5ac979ae3fb303008493bdafa8 285 SUPERFAMILY SSF53697 111 276 6.08E-38 T 09-03-2017 RG43_RS07595 636b6d5ac979ae3fb303008493bdafa8 285 Gene3D G3DSA:1.10.10.10 3 75 3.6E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS07595 636b6d5ac979ae3fb303008493bdafa8 285 Gene3D G3DSA:3.40.50.10490 101 275 2.6E-37 T 09-03-2017 RG43_RS07595 636b6d5ac979ae3fb303008493bdafa8 285 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 6.4E-26 T 09-03-2017 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 RG43_RS07595 636b6d5ac979ae3fb303008493bdafa8 285 SUPERFAMILY SSF46689 4 74 2.15E-14 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS07595 636b6d5ac979ae3fb303008493bdafa8 285 Pfam PF01380 SIS domain 132 260 6.4E-23 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 RG43_RS07595 636b6d5ac979ae3fb303008493bdafa8 285 Hamap MF_02108 HTH-type transcriptional regulator MurR [murR]. 1 285 63.571 T 09-03-2017 IPR022821 Transcription regulator HTH, MurR RG43_RS12470 1c961799c8e66571363c81642cf2ab91 287 SUPERFAMILY SSF53613 1 281 2.49E-77 T 09-03-2017 IPR029056 Ribokinase-like RG43_RS12470 1c961799c8e66571363c81642cf2ab91 287 Gene3D G3DSA:3.40.1190.20 1 286 7.1E-89 T 09-03-2017 IPR029056 Ribokinase-like RG43_RS12470 1c961799c8e66571363c81642cf2ab91 287 Hamap MF_01639 Pyridoxal kinase PdxY [pdxY]. 2 287 54.4 T 09-03-2017 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282 RG43_RS12470 1c961799c8e66571363c81642cf2ab91 287 Pfam PF08543 Phosphomethylpyrimidine kinase 68 256 1.2E-15 T 09-03-2017 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-964975 RG43_RS12470 1c961799c8e66571363c81642cf2ab91 287 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 286 2.0E-146 T 09-03-2017 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 RG43_RS11140 e4ba91754548b1ba9226b89355676a7d 116 Pfam PF01904 Protein of unknown function DUF72 21 93 2.4E-8 T 09-03-2017 IPR002763 Protein of unknown function DUF72 RG43_RS11140 e4ba91754548b1ba9226b89355676a7d 116 Gene3D G3DSA:3.20.20.410 23 105 1.5E-13 T 09-03-2017 IPR002763 Protein of unknown function DUF72 RG43_RS11140 e4ba91754548b1ba9226b89355676a7d 116 SUPERFAMILY SSF117396 18 96 1.31E-10 T 09-03-2017 IPR002763 Protein of unknown function DUF72 RG43_RS03185 3a445abc8bc7026b61c454ae3fddd2e1 331 Pfam PF01136 Peptidase family U32 76 330 4.4E-67 T 09-03-2017 IPR001539 Peptidase U32 GO:0006508|GO:0008233 RG43_RS03185 3a445abc8bc7026b61c454ae3fddd2e1 331 SUPERFAMILY SSF51391 11 162 1.41E-5 T 09-03-2017 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RG43_RS03185 3a445abc8bc7026b61c454ae3fddd2e1 331 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 09-03-2017 IPR001539 Peptidase U32 GO:0006508|GO:0008233 RG43_RS23200 9f94454ee879f7a6cd8a77fba0300dc7 488 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 19 478 2.3E-79 T 09-03-2017 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 RG43_RS23200 9f94454ee879f7a6cd8a77fba0300dc7 488 Gene3D G3DSA:2.20.200.10 108 155 5.5E-14 T 09-03-2017 RG43_RS23200 9f94454ee879f7a6cd8a77fba0300dc7 488 Gene3D G3DSA:2.20.200.10 328 363 5.5E-14 T 09-03-2017 RG43_RS23200 9f94454ee879f7a6cd8a77fba0300dc7 488 SUPERFAMILY SSF56954 7 481 1.96E-69 T 09-03-2017 RG43_RS23200 9f94454ee879f7a6cd8a77fba0300dc7 488 Gene3D G3DSA:1.20.1600.10 365 478 1.0E-64 T 09-03-2017 RG43_RS23200 9f94454ee879f7a6cd8a77fba0300dc7 488 Gene3D G3DSA:1.20.1600.10 156 327 1.0E-64 T 09-03-2017 RG43_RS23200 9f94454ee879f7a6cd8a77fba0300dc7 488 Gene3D G3DSA:1.20.1600.10 55 95 1.0E-64 T 09-03-2017 RG43_RS23200 9f94454ee879f7a6cd8a77fba0300dc7 488 Pfam PF02321 Outer membrane efflux protein 295 476 2.7E-10 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RG43_RS23200 9f94454ee879f7a6cd8a77fba0300dc7 488 Pfam PF02321 Outer membrane efflux protein 69 268 4.5E-8 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RG43_RS17590 f38327b2670741595e9e7aaf5150c161 68 Pfam PF10725 Protein of unknown function (DUF2517) 4 63 1.6E-33 T 09-03-2017 IPR019663 Uncharacterised protein YbfA RG43_RS24385 4f87f0a76dacd9577c81244efc892f60 761 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 133 514 3.1E-146 T 09-03-2017 IPR008766 Replication gene A protein GO:0006260 RG43_RS24910 947a5f6cc8d063495f4662ad0bd2e0ba 286 Pfam PF11392 Protein of unknown function (DUF2877) 168 278 2.2E-28 T 09-03-2017 IPR021530 Protein of unknown function DUF2877 RG43_RS18540 c6d58b57aff3f58188776891fa66f343 430 PIRSF PIRSF006060 1 429 2.1E-49 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RG43_RS18540 c6d58b57aff3f58188776891fa66f343 430 Pfam PF13520 Amino acid permease 13 396 1.9E-28 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RG43_RS18320 13177f57b235fda39bbad7f26d721892 77 Pfam PF13275 S4 domain 16 76 5.5E-24 T 09-03-2017 RG43_RS18320 13177f57b235fda39bbad7f26d721892 77 SUPERFAMILY SSF55174 6 76 2.49E-20 T 09-03-2017 RG43_RS18320 13177f57b235fda39bbad7f26d721892 77 Gene3D G3DSA:3.10.290.10 3 76 1.0E-28 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 RG43_RS18240 45d1f7f77311d0baac56a71c12967c7a 407 SUPERFAMILY SSF111369 118 318 6.93E-10 T 09-03-2017 RG43_RS18240 45d1f7f77311d0baac56a71c12967c7a 407 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 109 313 7.6E-58 T 09-03-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RG43_RS18240 45d1f7f77311d0baac56a71c12967c7a 407 Gene3D G3DSA:2.40.50.100 207 238 1.4E-7 T 09-03-2017 RG43_RS18240 45d1f7f77311d0baac56a71c12967c7a 407 Gene3D G3DSA:2.40.50.100 124 155 1.4E-7 T 09-03-2017 RG43_RS18240 45d1f7f77311d0baac56a71c12967c7a 407 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 204 391 8.4E-29 T 09-03-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RG43_RS18240 45d1f7f77311d0baac56a71c12967c7a 407 Pfam PF00529 HlyD membrane-fusion protein of T1SS 93 378 6.5E-11 T 09-03-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RG43_RS01380 5195eb784bd4a85e950c2e857341d182 429 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 3 426 1.4E-219 T 09-03-2017 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 RG43_RS01380 5195eb784bd4a85e950c2e857341d182 429 Pfam PF02040 Arsenical pump membrane protein 3 423 1.3E-159 T 09-03-2017 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 RG43_RS01380 5195eb784bd4a85e950c2e857341d182 429 PRINTS PR00758 Arsenical pump membrane protein signature 101 125 4.2E-123 T 09-03-2017 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 RG43_RS01380 5195eb784bd4a85e950c2e857341d182 429 PRINTS PR00758 Arsenical pump membrane protein signature 397 421 4.2E-123 T 09-03-2017 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 RG43_RS01380 5195eb784bd4a85e950c2e857341d182 429 PRINTS PR00758 Arsenical pump membrane protein signature 177 200 4.2E-123 T 09-03-2017 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 RG43_RS01380 5195eb784bd4a85e950c2e857341d182 429 PRINTS PR00758 Arsenical pump membrane protein signature 364 389 4.2E-123 T 09-03-2017 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 RG43_RS01380 5195eb784bd4a85e950c2e857341d182 429 PRINTS PR00758 Arsenical pump membrane protein signature 323 345 4.2E-123 T 09-03-2017 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 RG43_RS01380 5195eb784bd4a85e950c2e857341d182 429 PRINTS PR00758 Arsenical pump membrane protein signature 144 168 4.2E-123 T 09-03-2017 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 RG43_RS01380 5195eb784bd4a85e950c2e857341d182 429 PRINTS PR00758 Arsenical pump membrane protein signature 278 302 4.2E-123 T 09-03-2017 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 RG43_RS01380 5195eb784bd4a85e950c2e857341d182 429 PRINTS PR00758 Arsenical pump membrane protein signature 217 242 4.2E-123 T 09-03-2017 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 RG43_RS19890 2395f1c0197ab01a2c7b564a83cfe39f 128 Pfam PF16931 Putative phage holin 1 123 3.2E-40 T 09-03-2017 IPR032637 Putative phage holin-like RG43_RS01100 d30bce9c988f7af08b384a9a8ff9aab4 35 Pfam PF13940 Toxin Ldr, type I toxin-antitoxin system 1 35 6.7E-27 T 09-03-2017 IPR025253 Type I toxin-antitoxin system, toxin Ldr RG43_RS01065 462381d1f9177a9af316dab6fb71b1f4 300 SUPERFAMILY SSF161098 93 280 6.41E-29 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS01065 462381d1f9177a9af316dab6fb71b1f4 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 17 69 1.5E-16 T 09-03-2017 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RG43_RS01065 462381d1f9177a9af316dab6fb71b1f4 300 Gene3D G3DSA:1.10.3720.10 88 296 2.4E-30 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS01065 462381d1f9177a9af316dab6fb71b1f4 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 299 1.3E-30 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS25595 34bfc156337a0c76000d761136d83896 391 Pfam PF07690 Major Facilitator Superfamily 10 342 2.7E-44 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS25595 34bfc156337a0c76000d761136d83896 391 Hamap MF_01530 Multidrug resistance protein MdtL [mdtL]. 1 391 37.463 T 09-03-2017 IPR023697 Multidrug resistance protein MdtL GO:0005215|GO:0005886 RG43_RS25595 34bfc156337a0c76000d761136d83896 391 Gene3D G3DSA:1.20.1250.20 210 380 4.7E-9 T 09-03-2017 RG43_RS25595 34bfc156337a0c76000d761136d83896 391 Gene3D G3DSA:1.20.1250.20 5 187 2.2E-34 T 09-03-2017 RG43_RS25595 34bfc156337a0c76000d761136d83896 391 SUPERFAMILY SSF103473 3 385 1.83E-56 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS22740 3ba58aaf0b3c6c40d9e64b550c0fb0a7 104 ProDom PD069398 YJEN 1 102 4.0E-50 T 09-03-2017 IPR020528 Uncharacterised protein family YjeN RG43_RS12530 b2cdcea1d0c57fe6f0d34de0d283b551 71 SUPERFAMILY SSF68989 1 71 1.12E-22 T 09-03-2017 IPR007985 Haemolysin expression modulating, HHA RG43_RS12530 b2cdcea1d0c57fe6f0d34de0d283b551 71 Gene3D G3DSA:1.20.1280.40 1 71 2.0E-32 T 09-03-2017 IPR007985 Haemolysin expression modulating, HHA RG43_RS12530 b2cdcea1d0c57fe6f0d34de0d283b551 71 Pfam PF05321 Haemolysin expression modulating protein 8 68 2.7E-29 T 09-03-2017 IPR007985 Haemolysin expression modulating, HHA RG43_RS00350 30068faf600b7f094b19e354f221538b 116 Pfam PF05717 IS66 Orf2 like protein 9 106 1.1E-36 T 09-03-2017 IPR008878 Transposase IS66, Orf2 RG43_RS04485 5019c018f4aab79e94f7e86bc84dd70b 125 Pfam PF06755 CbtA_toxin of type IV toxin-antitoxin system 1 112 1.2E-59 T 09-03-2017 IPR009610 CbtA toxin of type IV toxin-antitoxin system RG43_RS26860 5019c018f4aab79e94f7e86bc84dd70b 125 Pfam PF06755 CbtA_toxin of type IV toxin-antitoxin system 1 112 1.2E-59 T 09-03-2017 IPR009610 CbtA toxin of type IV toxin-antitoxin system RG43_RS24345 b0537e058a651aaccc0016d591371603 284 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 6 284 3.8E-110 T 09-03-2017 IPR009228 Capsid scaffolding protein GpO GO:0019069 RG43_RS06475 9570ebfc5e444fe17387a2c51dcca55f 245 Pfam PF03591 AzlC protein 24 165 1.4E-37 T 09-03-2017 IPR011606 Branched-chain amino acid transport, permease RG43_RS09270 33f950c57db0f02f28b1382325b79f5f 93 Pfam PF10836 Protein of unknown function (DUF2574) 1 93 1.8E-51 T 09-03-2017 IPR020386 Uncharacterised protein family YehE RG43_RS09270 33f950c57db0f02f28b1382325b79f5f 93 ProDom PD064930 YEHE MEMBRANE OUTER STY2382 PRECURSOR ECS2918 SIGNAL 1 83 1.0E-42 T 09-03-2017 IPR020386 Uncharacterised protein family YehE RG43_RS16905 058e97dba900ba6c1ed17c541edecb7e 131 Pfam PF14000 DNA packaging protein FI 2 128 1.0E-51 T 09-03-2017 IPR025147 DNA packaging protein FI RG43_RS13865 f54267821097bf2da5d53969cd3631b0 119 Pfam PF04024 PspC domain 8 65 2.7E-15 T 09-03-2017 IPR007168 Phage shock protein, PspC, N-terminal RG43_RS13865 f54267821097bf2da5d53969cd3631b0 119 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 7 119 2.4E-40 T 09-03-2017 IPR014320 Phage shock protein, PspC RG43_RS20715 0e6003b175c65911bc68fb215270015c 232 SUPERFAMILY SSF53167 1 229 4.32E-75 T 09-03-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RG43_RS20715 0e6003b175c65911bc68fb215270015c 232 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 229 47.921 T 09-03-2017 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 RG43_RS20715 0e6003b175c65911bc68fb215270015c 232 Gene3D G3DSA:3.40.50.1580 1 229 4.2E-77 T 09-03-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RG43_RS20715 0e6003b175c65911bc68fb215270015c 232 Pfam PF01048 Phosphorylase superfamily 2 226 6.2E-49 T 09-03-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RG43_RS20715 0e6003b175c65911bc68fb215270015c 232 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 229 9.6E-138 T 09-03-2017 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 RG43_RS20585 b73241c9d4bb4ad3c962e0012628301a 198 Pfam PF01351 Ribonuclease HII 13 188 5.3E-39 T 09-03-2017 IPR024567 Ribonuclease HII/HIII domain RG43_RS20585 b73241c9d4bb4ad3c962e0012628301a 198 Hamap MF_00052_B Ribonuclease HII [rnhB]. 11 190 39.24 T 09-03-2017 IPR022898 Ribonuclease HII GO:0004523 RG43_RS20585 b73241c9d4bb4ad3c962e0012628301a 198 SUPERFAMILY SSF53098 3 195 8.04E-70 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS20585 b73241c9d4bb4ad3c962e0012628301a 198 Gene3D G3DSA:3.30.420.10 11 151 2.1E-48 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 RG43_RS19650 7ba29597baa20373a9fa85c318a11ccc 109 Pfam PF03692 Putative zinc- or iron-chelating domain 6 98 4.8E-12 T 09-03-2017 IPR005358 Putative zinc- or iron-chelating domain containing protein RG43_RS24735 45589e0d6140d039b9ea5e4c18478b35 89 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 3.1E-46 T 09-03-2017 IPR009383 Protein of unknown function DUF1040 RG43_RS24735 45589e0d6140d039b9ea5e4c18478b35 89 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 1.0E-44 T 09-03-2017 IPR009383 Protein of unknown function DUF1040 RG43_RS09825 16bded1a95f2b4c84078519fa962942a 352 Pfam PF04632 Fusaric acid resistance protein family 21 253 3.8E-18 T 09-03-2017 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 RG43_RS01090 034b385ac04e5d057de88f038052125e 35 Pfam PF13940 Toxin Ldr, type I toxin-antitoxin system 1 35 4.1E-26 T 09-03-2017 IPR025253 Type I toxin-antitoxin system, toxin Ldr RG43_RS02095 76ba5d1213b18a531b417abd1f61de8f 55 Pfam PF13978 Protein of unknown function (DUF4223) 1 54 9.2E-36 T 09-03-2017 IPR025318 Protein of unknown function DUF4223 RG43_RS01230 9f913760ae5fc270b0bcfd6304847fad 549 SUPERFAMILY SSF48208 55 547 1.62E-148 T 09-03-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 RG43_RS01230 9f913760ae5fc270b0bcfd6304847fad 549 Pfam PF01204 Trehalase 70 546 3.3E-166 T 09-03-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 RG43_RS01230 9f913760ae5fc270b0bcfd6304847fad 549 ProSitePatterns PS00928 Trehalase signature 2. 459 468 - T 09-03-2017 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 RG43_RS01230 9f913760ae5fc270b0bcfd6304847fad 549 Hamap MF_01059 Cytoplasmic trehalase [treF]. 34 549 80.38 T 09-03-2017 IPR023715 Trehalase, cytoplasmic GO:0004555|GO:0005737|GO:0005993|GO:0071474 KEGG: 00500+3.2.1.28 RG43_RS01230 9f913760ae5fc270b0bcfd6304847fad 549 PRINTS PR00744 Glycosyl hydrolase family 37 signature 452 468 5.1E-46 T 09-03-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 RG43_RS01230 9f913760ae5fc270b0bcfd6304847fad 549 PRINTS PR00744 Glycosyl hydrolase family 37 signature 389 405 5.1E-46 T 09-03-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 RG43_RS01230 9f913760ae5fc270b0bcfd6304847fad 549 PRINTS PR00744 Glycosyl hydrolase family 37 signature 314 331 5.1E-46 T 09-03-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 RG43_RS01230 9f913760ae5fc270b0bcfd6304847fad 549 PRINTS PR00744 Glycosyl hydrolase family 37 signature 530 543 5.1E-46 T 09-03-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 RG43_RS01230 9f913760ae5fc270b0bcfd6304847fad 549 PRINTS PR00744 Glycosyl hydrolase family 37 signature 346 363 5.1E-46 T 09-03-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 RG43_RS01230 9f913760ae5fc270b0bcfd6304847fad 549 PRINTS PR00744 Glycosyl hydrolase family 37 signature 207 225 5.1E-46 T 09-03-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 RG43_RS01230 9f913760ae5fc270b0bcfd6304847fad 549 PRINTS PR00744 Glycosyl hydrolase family 37 signature 281 298 5.1E-46 T 09-03-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 RG43_RS01230 9f913760ae5fc270b0bcfd6304847fad 549 ProSitePatterns PS00927 Trehalase signature 1. 165 178 - T 09-03-2017 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 RG43_RS24165 38099a8d1e80de444c8636b251b71fa8 199 Pfam PF07305 Protein of unknown function (DUF1454) 9 192 5.0E-86 T 09-03-2017 IPR009918 Protein of unknown function DUF1454 RG43_RS20170 69714855874862a9529bb2fb3fce58f6 263 PIRSF PIRSF007319 1 263 9.1E-148 T 09-03-2017 IPR016513 Uncharacterised conserved protein UCP007319 RG43_RS25175 a24abe2291b2d169d091c0ff17c2db48 359 Hamap MF_01002 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [wecF]. 1 359 63.536 T 09-03-2017 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 RG43_RS25175 a24abe2291b2d169d091c0ff17c2db48 359 Pfam PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 1 355 6.9E-180 T 09-03-2017 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 RG43_RS23700 3219876b9475d275e167f644c2e6bcb3 196 Pfam PF04222 Protein of unknown function (DUF416) 5 192 3.0E-83 T 09-03-2017 IPR007338 Protein of unknown function DUF416 RG43_RS23700 3219876b9475d275e167f644c2e6bcb3 196 Gene3D G3DSA:1.20.1590.10 1 192 8.8E-93 T 09-03-2017 IPR023381 YP001051499.1-like domain RG43_RS24400 df8e9ffe1fb67f06b498434ba58af221 100 ProDom PD067735 GP81 ORF2 GPA 5'REGION ORF81 1 99 8.0E-42 T 09-03-2017 RG43_RS08735 f9b13f66f89f0cdadc7c83f3fae071d1 162 Hamap MF_00706 Ecotin [eco]. 1 162 42.126 T 09-03-2017 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria RG43_RS08735 f9b13f66f89f0cdadc7c83f3fae071d1 162 Pfam PF03974 Ecotin 30 152 6.8E-53 T 09-03-2017 IPR023189 Proteinase inhibitor I11, ecotin domain RG43_RS08735 f9b13f66f89f0cdadc7c83f3fae071d1 162 PIRSF PIRSF006865 1 162 3.6E-65 T 09-03-2017 IPR005658 Proteinase inhibitor I11, ecotin RG43_RS08735 f9b13f66f89f0cdadc7c83f3fae071d1 162 SUPERFAMILY SSF49772 26 160 1.01E-57 T 09-03-2017 IPR023189 Proteinase inhibitor I11, ecotin domain RG43_RS08735 f9b13f66f89f0cdadc7c83f3fae071d1 162 Gene3D G3DSA:2.60.40.550 23 104 5.6E-41 T 09-03-2017 IPR023189 Proteinase inhibitor I11, ecotin domain RG43_RS08735 f9b13f66f89f0cdadc7c83f3fae071d1 162 Gene3D G3DSA:4.10.1230.10 105 161 1.0E-31 T 09-03-2017 IPR027438 Ecotin, C-terminal RG43_RS18180 e5704c505cde9a2250532866f3724f28 50 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 1 49 2.0E-20 T 09-03-2017 IPR000021 Hok/gef cell toxic protein GO:0016020 RG43_RS18180 e5704c505cde9a2250532866f3724f28 50 PRINTS PR00281 Hok/Gef cell toxic protein family signature 5 23 3.0E-11 T 09-03-2017 IPR000021 Hok/gef cell toxic protein GO:0016020 RG43_RS18180 e5704c505cde9a2250532866f3724f28 50 PRINTS PR00281 Hok/Gef cell toxic protein family signature 25 47 3.0E-11 T 09-03-2017 IPR000021 Hok/gef cell toxic protein GO:0016020 RG43_RS18180 e5704c505cde9a2250532866f3724f28 50 Pfam PF01848 Hok/gef family 5 46 4.1E-17 T 09-03-2017 IPR000021 Hok/gef cell toxic protein GO:0016020 RG43_RS18180 e5704c505cde9a2250532866f3724f28 50 ProSitePatterns PS00556 Hok/gef family cell toxic proteins signature. 10 29 - T 09-03-2017 IPR018084 Hok/gef cell toxic protein, conserved site GO:0016020 RG43_RS06490 be462440ae3b98ef7fe2b1c81b976dce 354 Gene3D G3DSA:1.10.3720.10 140 325 3.4E-44 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS06490 be462440ae3b98ef7fe2b1c81b976dce 354 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 163 324 3.0E-26 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS06490 be462440ae3b98ef7fe2b1c81b976dce 354 SUPERFAMILY SSF161098 142 324 3.92E-44 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS05360 47bc2ed4a3c4a9694353796fcd56fee9 455 Pfam PF00860 Permease family 32 415 3.6E-78 T 09-03-2017 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RG43_RS12220 afef8b42471b15e629ebf876099dc891 122 Gene3D G3DSA:2.60.300.12 18 111 7.5E-29 T 09-03-2017 IPR000361 FeS cluster biogenesis RG43_RS12220 afef8b42471b15e629ebf876099dc891 122 Pfam PF01521 Iron-sulphur cluster biosynthesis 18 118 8.6E-19 T 09-03-2017 IPR000361 FeS cluster biogenesis RG43_RS12220 afef8b42471b15e629ebf876099dc891 122 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 103 120 - T 09-03-2017 IPR017870 FeS cluster insertion, C-terminal, conserved site RG43_RS12220 afef8b42471b15e629ebf876099dc891 122 TIGRFAM TIGR01997 sufA_proteo: FeS assembly scaffold SufA 17 122 2.0E-51 T 09-03-2017 IPR011298 FeS assembly scaffold SufA GO:0016226 RG43_RS12220 afef8b42471b15e629ebf876099dc891 122 SUPERFAMILY SSF89360 18 111 5.69E-27 T 09-03-2017 IPR000361 FeS cluster biogenesis RG43_RS12220 afef8b42471b15e629ebf876099dc891 122 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 18 121 7.5E-33 T 09-03-2017 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 RG43_RS22355 544d2ab78a3f7f167638b8c555746659 577 Gene3D G3DSA:2.40.160.50 306 574 1.1E-21 T 09-03-2017 RG43_RS22355 544d2ab78a3f7f167638b8c555746659 577 Pfam PF07244 Surface antigen variable number repeat 189 252 2.6E-8 T 09-03-2017 IPR010827 Surface antigen variable number GO:0019867 RG43_RS22355 544d2ab78a3f7f167638b8c555746659 577 Pfam PF01103 Surface antigen 282 574 3.7E-31 T 09-03-2017 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020 RG43_RS11535 48ceeff369173479995acd1316efe884 283 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 11 281 3.0E-150 T 09-03-2017 IPR018405 Phosphotransferase system, mannose/fructose/sorbose family IID component, subgroup GO:0009401|GO:0016021 RG43_RS11535 48ceeff369173479995acd1316efe884 283 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 12 281 2.5E-111 T 09-03-2017 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 RG43_RS23495 fbb6498f0e2700d373910bd08ba7709a 92 Pfam PF17089 Uncharacterised protein family 1 92 1.0E-65 T 09-03-2017 IPR031382 Uncharacterised protein YjbT RG43_RS18935 258ae3881d854c1d90e7c3ef24b030ce 179 Pfam PF11622 Protein of unknown function (DUF3251) 20 176 1.3E-78 T 09-03-2017 IPR021658 Domain of unknown function DUF3251 RG43_RS18935 258ae3881d854c1d90e7c3ef24b030ce 179 Gene3D G3DSA:2.60.40.1620 43 177 1.5E-69 T 09-03-2017 IPR021658 Domain of unknown function DUF3251 RG43_RS03290 39cf10cc54ad0e25226e848764bc1cf1 292 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 36 291 1.6E-92 T 09-03-2017 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 RG43_RS08640 8052f4b1a1591eb979f9030fc61c1eff 258 PIRSF PIRSF012281 1 258 2.9E-128 T 09-03-2017 IPR012039 Uncharacterised conserved protein UCP012281 RG43_RS08640 8052f4b1a1591eb979f9030fc61c1eff 258 Pfam PF09906 Uncharacterized protein conserved in bacteria (DUF2135) 199 244 1.4E-18 T 09-03-2017 IPR019220 Domain of unknown function DUF2135 RG43_RS15790 1d27f14c24a3a1404eebff2122cd79d1 148 Pfam PF03733 Inner membrane component domain 4 53 3.2E-9 T 09-03-2017 IPR005185 Inner membrane component domain RG43_RS15790 1d27f14c24a3a1404eebff2122cd79d1 148 Pfam PF03733 Inner membrane component domain 77 127 6.2E-17 T 09-03-2017 IPR005185 Inner membrane component domain RG43_RS15790 1d27f14c24a3a1404eebff2122cd79d1 148 PIRSF PIRSF028777 1 139 2.8E-54 T 09-03-2017 IPR031308 Uncharacterised conserved protein UCP028777 RG43_RS22175 444aa3a9dfc496153e4f9d7a66d0dd04 398 Pfam PF05987 Bacterial protein of unknown function (DUF898) 13 367 1.9E-46 T 09-03-2017 IPR010295 Protein of unknown function DUF898 RG43_RS16320 5c8582d7e6f35166b358ca79e5b5c576 162 Pfam PF10767 Protein of unknown function (DUF2593) 21 160 3.7E-63 T 09-03-2017 IPR019703 Protein of unknown function DUF2593 RG43_RS05470 2e8772e4139a5c9333f3cfb4f88bd647 409 Pfam PF03222 Tryptophan/tyrosine permease family 16 379 4.7E-11 T 09-03-2017 IPR018227 Tryptophan/tyrosine permease GO:0003333 RG43_RS19845 e0e9171487b0c9bede7aad870d421f46 502 Pfam PF05136 Phage portal protein, lambda family 35 372 3.3E-80 T 09-03-2017 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 RG43_RS19845 e0e9171487b0c9bede7aad870d421f46 502 TIGRFAM TIGR01539 portal_lambda: phage portal protein, lambda family 31 476 1.7E-136 T 09-03-2017 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 RG43_RS08915 f49f9ea811d89e701c0cc9d9a464363a 188 Gene3D G3DSA:3.90.1720.10 68 186 7.4E-46 T 09-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain RG43_RS08915 f49f9ea811d89e701c0cc9d9a464363a 188 SUPERFAMILY SSF54001 67 185 1.86E-41 T 09-03-2017 RG43_RS08915 f49f9ea811d89e701c0cc9d9a464363a 188 Pfam PF00877 NlpC/P60 family 79 183 2.0E-34 T 09-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain RG43_RS05665 2bb6da55b13be831f95f62ad69af3c7f 178 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 19 166 6.3E-34 T 09-03-2017 IPR017734 Type VI secretion system, lipoprotein SciN RG43_RS05665 2bb6da55b13be831f95f62ad69af3c7f 178 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 11 159 4.8E-23 T 09-03-2017 IPR017734 Type VI secretion system, lipoprotein SciN RG43_RS24285 b263ab857189500cf23cf780cf81bbcd 155 Pfam PF06891 P2 phage tail completion protein R (GpR) 1 130 5.6E-45 T 09-03-2017 IPR009678 Bacteriophage tail completion protein R RG43_RS20690 cfc22b0db3e44502351f754d67ffac30 128 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 126 32.774 T 09-03-2017 IPR020911 Uncharacterised protein family UPF0325 RG43_RS20690 cfc22b0db3e44502351f754d67ffac30 128 Pfam PF11944 Protein of unknown function (DUF3461) 1 125 3.9E-57 T 09-03-2017 IPR020911 Uncharacterised protein family UPF0325 RG43_RS20690 cfc22b0db3e44502351f754d67ffac30 128 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 125 2.0E-67 T 09-03-2017 IPR020911 Uncharacterised protein family UPF0325 RG43_RS15005 fa652efb569cb896d226514a98ae1945 125 Pfam PF07233 Protein of unknown function (DUF1425) 34 124 1.6E-26 T 09-03-2017 IPR010824 Protein of unknown function DUF1425 RG43_RS15655 eb8a5781378bed80c158cc4b4bc2f219 214 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 13 210 3.0E-67 T 09-03-2017 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB RG43_RS15655 eb8a5781378bed80c158cc4b4bc2f219 214 Gene3D G3DSA:2.40.360.10 16 213 2.4E-81 T 09-03-2017 IPR023373 YmcC-like domain RG43_RS15655 eb8a5781378bed80c158cc4b4bc2f219 214 SUPERFAMILY SSF159270 19 213 4.97E-64 T 09-03-2017 IPR023373 YmcC-like domain RG43_RS15370 ff868b3e5174eae1e4b69f228cbb012e 151 Pfam PF07012 Curlin associated repeat 75 106 3.5E-10 T 09-03-2017 IPR009742 Curlin associated GO:0007155|GO:0009289 RG43_RS15370 ff868b3e5174eae1e4b69f228cbb012e 151 Pfam PF07012 Curlin associated repeat 100 130 1.9E-8 T 09-03-2017 IPR009742 Curlin associated GO:0007155|GO:0009289 RG43_RS15370 ff868b3e5174eae1e4b69f228cbb012e 151 Pfam PF07012 Curlin associated repeat 53 86 4.6E-7 T 09-03-2017 IPR009742 Curlin associated GO:0007155|GO:0009289 RG43_RS00715 82d6cb8c61384f3e277661f158e5099d 227 Gene3D G3DSA:2.60.40.1620 116 203 4.3E-4 T 09-03-2017 IPR021658 Domain of unknown function DUF3251 RG43_RS10785 169a2e6c93c3401c20f3a23ea8ff6f65 109 Pfam PF12323 Helix-turn-helix domain 1 48 1.6E-15 T 09-03-2017 IPR021027 Transposase, putative, helix-turn-helix domain RG43_RS19175 b0e98d80d4ef5bade813b1737737382c 223 Pfam PF02585 GlcNAc-PI de-N-acetylase 20 141 1.6E-22 T 09-03-2017 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 RG43_RS19175 b0e98d80d4ef5bade813b1737737382c 223 Gene3D G3DSA:3.40.50.10320 16 222 2.3E-47 T 09-03-2017 IPR024078 Putative deacetylase LmbE-like domain Reactome: R-HSA-162710 RG43_RS19175 b0e98d80d4ef5bade813b1737737382c 223 SUPERFAMILY SSF102588 18 222 8.5E-42 T 09-03-2017 IPR024078 Putative deacetylase LmbE-like domain Reactome: R-HSA-162710 RG43_RS19780 10e586fd6d286154b42ff57d11576665 215 Pfam PF06805 Bacteriophage lambda tail assembly protein I 14 97 2.8E-28 T 09-03-2017 IPR010654 Bacteriophage lambda tail assembly I RG43_RS05695 dad70c3d11d49222d50f3b6558aea1d5 1108 Pfam PF06761 Intracellular multiplication and human macrophage-killing 394 710 2.1E-59 T 09-03-2017 IPR009612 ImcF-related RG43_RS05695 dad70c3d11d49222d50f3b6558aea1d5 1108 Pfam PF06744 Type VI secretion protein IcmF C-terminal 841 1037 4.5E-53 T 09-03-2017 IPR010623 Type VI secretion system IcmF, C-terminal RG43_RS25125 149fb7a87508140bd49dfb75a2489068 398 Pfam PF07719 Tetratricopeptide repeat 329 360 1.7E-5 T 09-03-2017 IPR013105 Tetratricopeptide repeat 2 RG43_RS25125 149fb7a87508140bd49dfb75a2489068 398 Pfam PF07219 HemY protein N-terminus 26 132 6.3E-36 T 09-03-2017 IPR010817 HemY, N-terminal RG43_RS25125 149fb7a87508140bd49dfb75a2489068 398 Gene3D G3DSA:1.25.40.10 265 296 1.8E-16 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS25125 149fb7a87508140bd49dfb75a2489068 398 Gene3D G3DSA:1.25.40.10 83 203 1.8E-16 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS25125 149fb7a87508140bd49dfb75a2489068 398 Gene3D G3DSA:1.25.40.10 328 383 1.8E-16 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS25125 149fb7a87508140bd49dfb75a2489068 398 SUPERFAMILY SSF48452 269 383 6.26E-10 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS25125 149fb7a87508140bd49dfb75a2489068 398 SUPERFAMILY SSF48452 95 226 6.26E-10 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS25125 149fb7a87508140bd49dfb75a2489068 398 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 4 386 4.3E-118 T 09-03-2017 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 RG43_RS11670 455f98bebfeb521aa6aa9acd749a3b4e 82 Pfam PF04226 Transglycosylase associated protein 33 81 4.7E-17 T 09-03-2017 IPR007341 Transglycosylase-associated protein GO:0016021 RG43_RS13450 316e84fc3b1a7110693513d3bab8dc1e 197 Gene3D G3DSA:3.40.50.150 7 196 2.2E-39 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS13450 316e84fc3b1a7110693513d3bab8dc1e 197 SUPERFAMILY SSF53335 7 196 3.87E-34 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RG43_RS13450 316e84fc3b1a7110693513d3bab8dc1e 197 TIGRFAM TIGR00477 tehB: tellurite resistance protein TehB 1 196 1.9E-113 T 09-03-2017 IPR004537 Tellurite resistance methyltransferase, TehB GO:0005737|GO:0008757|GO:0046690 RG43_RS13450 316e84fc3b1a7110693513d3bab8dc1e 197 Pfam PF03848 Tellurite resistance protein TehB 1 193 2.3E-110 T 09-03-2017 IPR015985 Tellurite resistance methyltransferase TehB-like domain RG43_RS15545 01f51658daa54b6fce36cc556c007d30 75 Pfam PF13993 YccJ-like protein 9 75 2.2E-38 T 09-03-2017 IPR025600 YccJ-like protein RG43_RS01140 72cf4686a5ef1fbb03be07e40aec6b4e 26 Pfam PF06564 Cellulose biosynthesis protein BcsQ 1 26 3.2E-9 T 09-03-2017 IPR017746 Cellulose synthase operon protein BcsQ RG43_RS14945 244f900a709d08330dbbbe6a157ce87b 399 Pfam PF02687 FtsX-like permease family 270 392 4.5E-16 T 09-03-2017 IPR003838 ABC transporter permease protein domain GO:0016020 RG43_RS14945 244f900a709d08330dbbbe6a157ce87b 399 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 399 4.0E-148 T 09-03-2017 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 RG43_RS14945 244f900a709d08330dbbbe6a157ce87b 399 Gene3D G3DSA:2.40.40.20 132 164 3.7E-4 T 09-03-2017 RG43_RS14945 244f900a709d08330dbbbe6a157ce87b 399 Pfam PF12704 MacB-like periplasmic core domain 27 205 1.9E-13 T 09-03-2017 IPR025857 MacB-like periplasmic core domain RG43_RS24350 fcd2e2936609f96fb570594977bdb285 590 Pfam PF03237 Terminase-like family 164 571 2.6E-107 T 09-03-2017 IPR004921 Terminase, large subunit RG43_RS24350 fcd2e2936609f96fb570594977bdb285 590 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 12 69 2.9E-26 T 09-03-2017 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 RG43_RS24350 fcd2e2936609f96fb570594977bdb285 590 Gene3D G3DSA:1.10.10.10 10 47 2.3E-4 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS03515 b1900965dc40ddccf7db2249065d15e7 321 Pfam PF03741 Integral membrane protein TerC family 80 282 8.5E-57 T 09-03-2017 IPR005496 Integral membrane protein TerC GO:0016021 RG43_RS03515 b1900965dc40ddccf7db2249065d15e7 321 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 7 311 5.2E-121 T 09-03-2017 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 RG43_RS07115 de6f99239b4941ac1360cd737b466eb9 162 Pfam PF02082 Transcriptional regulator 1 83 2.7E-27 T 09-03-2017 IPR000944 Transcription regulator Rrf2-type RG43_RS07115 de6f99239b4941ac1360cd737b466eb9 162 SUPERFAMILY SSF46785 2 133 6.18E-36 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS07115 de6f99239b4941ac1360cd737b466eb9 162 Gene3D G3DSA:1.10.10.10 1 134 6.1E-31 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS07115 de6f99239b4941ac1360cd737b466eb9 162 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 1.9E-66 T 09-03-2017 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 RG43_RS07115 de6f99239b4941ac1360cd737b466eb9 162 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 7.4E-47 T 09-03-2017 IPR000944 Transcription regulator Rrf2-type RG43_RS07115 de6f99239b4941ac1360cd737b466eb9 162 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 09-03-2017 IPR030489 Transcription regulator Rrf2-type, conserved site RG43_RS07115 de6f99239b4941ac1360cd737b466eb9 162 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 1 162 45.923 T 09-03-2017 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 RG43_RS16810 868e550de82e2b7f13ecf96b0f597648 167 Pfam PF03400 IS1 transposase 37 167 2.2E-77 T 09-03-2017 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 RG43_RS18370 9d90dd08b5a656c33d96c76d9b96f188 271 Pfam PF11392 Protein of unknown function (DUF2877) 159 263 3.7E-28 T 09-03-2017 IPR021530 Protein of unknown function DUF2877 RG43_RS16685 b44cacfa6f04af42d5cc1336e756855c 377 Pfam PF12698 ABC-2 family transporter protein 29 370 3.3E-38 T 09-03-2017 RG43_RS14915 f9cb0dd802d4f169c81374b0a71dd6ab 153 Pfam PF12158 Protein of unknown function (DUF3592) 7 138 5.3E-15 T 09-03-2017 IPR021994 Protein of unknown function DUF3592 RG43_RS15150 b9f1b59294352a7d304bee84cedd3ceb 164 Gene3D G3DSA:3.40.630.30 41 144 2.1E-13 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS15150 b9f1b59294352a7d304bee84cedd3ceb 164 Pfam PF13673 Acetyltransferase (GNAT) domain 77 145 3.2E-5 T 09-03-2017 IPR000182 GNAT domain GO:0008080 RG43_RS15150 b9f1b59294352a7d304bee84cedd3ceb 164 SUPERFAMILY SSF55729 65 147 3.04E-10 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS13635 70ae7df1b964c15eb97ff2db11c457d1 88 Pfam PF03891 Domain of unknown function (DUF333) 38 83 2.5E-15 T 09-03-2017 IPR005590 Protein of unknown function DUF333 RG43_RS14645 4b9d8a9cd5598f49b9747da4962527b3 510 Pfam PF04293 SpoVR like protein 19 450 8.0E-177 T 09-03-2017 IPR007390 Sporulation stage V, protein R RG43_RS15420 c73d1e1445b2613f9198a32cc1a5d2fa 312 Gene3D G3DSA:3.40.50.720 94 278 6.9E-51 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS15420 c73d1e1445b2613f9198a32cc1a5d2fa 312 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 216 232 - T 09-03-2017 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RG43_RS15420 c73d1e1445b2613f9198a32cc1a5d2fa 312 SUPERFAMILY SSF51735 99 278 3.28E-45 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS15420 c73d1e1445b2613f9198a32cc1a5d2fa 312 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 105 277 3.9E-45 T 09-03-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RG43_RS15420 c73d1e1445b2613f9198a32cc1a5d2fa 312 Hamap MF_01666 Glyoxylate/hydroxypyruvate reductase A [ghrA]. 1 312 64.565 T 09-03-2017 IPR023514 Glyoxylate/hydroxypyruvate reductase A GO:0016618|GO:0030267|GO:0055114 KEGG: 00260+1.1.1.81|KEGG: 00620+1.1.1.79|KEGG: 00630+1.1.1.79+1.1.1.81|MetaCyc: PWY-1622 RG43_RS08485 0ebbfd366c3601fae657dc0c1940a776 550 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 4 237 7.0E-57 T 09-03-2017 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 Reactome: R-HSA-5173105 RG43_RS08485 0ebbfd366c3601fae657dc0c1940a776 550 Hamap MF_01165 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase [arnT]. 1 550 42.922 T 09-03-2017 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase GO:0016763 RG43_RS23130 c372b457fdb86016bae2b0dc6abe5d9a 252 SUPERFAMILY SSF56281 5 251 2.84E-34 T 09-03-2017 IPR001279 Metallo-beta-lactamase RG43_RS23130 c372b457fdb86016bae2b0dc6abe5d9a 252 Pfam PF12706 Beta-lactamase superfamily domain 72 223 3.8E-15 T 09-03-2017 IPR001279 Metallo-beta-lactamase RG43_RS23130 c372b457fdb86016bae2b0dc6abe5d9a 252 Gene3D G3DSA:3.60.15.10 2 251 3.6E-60 T 09-03-2017 IPR001279 Metallo-beta-lactamase RG43_RS23130 c372b457fdb86016bae2b0dc6abe5d9a 252 TIGRFAM TIGR03307 PhnP: phosphonate metabolism protein PhnP 3 248 7.7E-128 T 09-03-2017 IPR017693 Phosphonate metabolism protein PhnP GO:0008081|GO:0019700 KEGG: 00440+3.1.4.55 RG43_RS04930 dbfacff178fe3f821f92f5cf0121219a 238 Pfam PF11101 Protein of unknown function (DUF2884) 23 234 9.4E-41 T 09-03-2017 IPR021307 Protein of unknown function DUF2884 RG43_RS03020 354349c4da2bb2a5e4306a07992022ef 92 SUPERFAMILY SSF47413 3 72 7.87E-29 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS03020 354349c4da2bb2a5e4306a07992022ef 92 Gene3D G3DSA:1.10.260.40 6 72 9.5E-38 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS03020 354349c4da2bb2a5e4306a07992022ef 92 Pfam PF13693 Winged helix-turn-helix DNA-binding 7 81 4.1E-35 T 09-03-2017 RG43_RS24690 d6d01f403ba2cc3896163106ecc766cc 169 Pfam PF04220 Der GTPase activator (YihI) 14 166 1.6E-54 T 09-03-2017 IPR007336 Der GTPase activator RG43_RS24690 d6d01f403ba2cc3896163106ecc766cc 169 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 169 16.923 T 09-03-2017 IPR007336 Der GTPase activator RG43_RS22195 94b8d7499fe3336fa6b039e55996795f 167 Pfam PF00583 Acetyltransferase (GNAT) family 66 145 5.5E-14 T 09-03-2017 IPR000182 GNAT domain GO:0008080 RG43_RS22195 94b8d7499fe3336fa6b039e55996795f 167 SUPERFAMILY SSF55729 10 166 3.43E-31 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS22195 94b8d7499fe3336fa6b039e55996795f 167 Gene3D G3DSA:3.40.630.30 10 166 8.9E-35 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS22960 302a309cafa4ae31c7427c0388a3cca6 446 PIRSF PIRSF004539 1 444 8.2E-197 T 09-03-2017 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 RG43_RS22960 302a309cafa4ae31c7427c0388a3cca6 446 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 6 443 4.1E-203 T 09-03-2017 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 RG43_RS22960 302a309cafa4ae31c7427c0388a3cca6 446 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 6 376 2.4E-149 T 09-03-2017 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 RG43_RS24605 986dcf3e4da9e0e9cf0024dd3b0dd689 449 Gene3D G3DSA:1.20.1250.20 245 437 3.6E-18 T 09-03-2017 RG43_RS24605 986dcf3e4da9e0e9cf0024dd3b0dd689 449 Gene3D G3DSA:1.20.1250.20 18 227 7.3E-23 T 09-03-2017 RG43_RS24605 986dcf3e4da9e0e9cf0024dd3b0dd689 449 SUPERFAMILY SSF103473 15 435 8.63E-63 T 09-03-2017 IPR020846 Major facilitator superfamily domain RG43_RS24605 986dcf3e4da9e0e9cf0024dd3b0dd689 449 Pfam PF07690 Major Facilitator Superfamily 54 392 7.5E-29 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RG43_RS14680 4cadab66002966e572b0f506cc4bd25c 153 Pfam PF03692 Putative zinc- or iron-chelating domain 29 97 2.8E-8 T 09-03-2017 IPR005358 Putative zinc- or iron-chelating domain containing protein RG43_RS14680 4cadab66002966e572b0f506cc4bd25c 153 PIRSF PIRSF006173 3 150 2.1E-68 T 09-03-2017 IPR008228 Uncharacterised conserved protein UCP006173 RG43_RS14680 4cadab66002966e572b0f506cc4bd25c 153 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 7 150 42.67 T 09-03-2017 IPR008228 Uncharacterised conserved protein UCP006173 RG43_RS24175 37cc44e310531f01ba4bb7cee5d65c85 255 SUPERFAMILY SSF51351 1 248 3.4E-91 T 09-03-2017 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS24175 37cc44e310531f01ba4bb7cee5d65c85 255 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 249 40.72 T 09-03-2017 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS24175 37cc44e310531f01ba4bb7cee5d65c85 255 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 1.5E-108 T 09-03-2017 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS24175 37cc44e310531f01ba4bb7cee5d65c85 255 Pfam PF00121 Triosephosphate isomerase 5 246 2.5E-93 T 09-03-2017 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS24175 37cc44e310531f01ba4bb7cee5d65c85 255 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 09-03-2017 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RG43_RS24175 37cc44e310531f01ba4bb7cee5d65c85 255 Gene3D G3DSA:3.20.20.70 1 250 2.0E-102 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 RG43_RS22680 849fc5842dac3792c9f745dde830d57a 445 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 194 413 1.2E-48 T 09-03-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 RG43_RS22680 849fc5842dac3792c9f745dde830d57a 445 SUPERFAMILY SSF53187 340 416 3.77E-53 T 09-03-2017 RG43_RS22680 849fc5842dac3792c9f745dde830d57a 445 SUPERFAMILY SSF53187 192 288 3.77E-53 T 09-03-2017 RG43_RS22680 849fc5842dac3792c9f745dde830d57a 445 SMART SM00646 254 413 4.6E-76 T 09-03-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 RG43_RS22680 849fc5842dac3792c9f745dde830d57a 445 Gene3D G3DSA:3.40.630.40 192 289 9.1E-59 T 09-03-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 RG43_RS22680 849fc5842dac3792c9f745dde830d57a 445 Gene3D G3DSA:3.40.630.40 341 416 9.1E-59 T 09-03-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 RG43_RS10940 acb84e878a5d1acabc9f414dcc134291 107 Pfam PF13992 YecR-like lipoprotein 27 98 3.3E-27 T 09-03-2017 IPR025731 YecR-like lipoprotein RG43_RS20085 fcefba3fb167a2323604f141d001bf93 246 Gene3D G3DSA:2.40.440.10 43 159 4.9E-5 T 09-03-2017 RG43_RS20085 fcefba3fb167a2323604f141d001bf93 246 Pfam PF03734 L,D-transpeptidase catalytic domain 45 159 2.5E-6 T 09-03-2017 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 RG43_RS20085 fcefba3fb167a2323604f141d001bf93 246 SUPERFAMILY SSF141523 42 159 1.83E-10 T 09-03-2017 RG43_RS18985 259f9af3f5295b6ac79f590afa45e77d 457 ProSitePatterns PS00218 Amino acid permeases signature. 40 70 - T 09-03-2017 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 RG43_RS18985 259f9af3f5295b6ac79f590afa45e77d 457 Pfam PF00324 Amino acid permease 15 451 2.3E-105 T 09-03-2017 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 RG43_RS18985 259f9af3f5295b6ac79f590afa45e77d 457 PIRSF PIRSF006060 1 456 2.2E-77 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RG43_RS10930 81b5dc60a40f17ff8d057986760c72c8 79 TIGRFAM TIGR03853 matur_matur: putative metal-binding protein 3 79 9.0E-36 T 09-03-2017 IPR019620 Putative metal-binding protein RG43_RS10930 81b5dc60a40f17ff8d057986760c72c8 79 Pfam PF10678 Protein of unknown function (DUF2492) 3 78 1.6E-36 T 09-03-2017 IPR019620 Putative metal-binding protein RG43_RS02285 07fed654174c2d1a05787a1b7654441b 225 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 158 169 7.1E-26 T 09-03-2017 IPR014032 Peptidase A24A, prepilin type IV, bacterial RG43_RS02285 07fed654174c2d1a05787a1b7654441b 225 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 147 157 7.1E-26 T 09-03-2017 IPR014032 Peptidase A24A, prepilin type IV, bacterial RG43_RS02285 07fed654174c2d1a05787a1b7654441b 225 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 170 185 7.1E-26 T 09-03-2017 IPR014032 Peptidase A24A, prepilin type IV, bacterial RG43_RS02285 07fed654174c2d1a05787a1b7654441b 225 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 90 107 7.1E-26 T 09-03-2017 IPR014032 Peptidase A24A, prepilin type IV, bacterial RG43_RS02285 07fed654174c2d1a05787a1b7654441b 225 Pfam PF01478 Type IV leader peptidase family 82 189 4.9E-29 T 09-03-2017 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 RG43_RS25450 75e7ada38e15a23c696fd31fc2f9e66b 156 SUPERFAMILY SSF81573 63 121 1.7E-15 T 09-03-2017 IPR028987 F-type ATP synthase subunit B-like, membrane domain RG43_RS25450 75e7ada38e15a23c696fd31fc2f9e66b 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 2.1E-61 T 09-03-2017 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 RG43_RS25450 75e7ada38e15a23c696fd31fc2f9e66b 156 Gene3D G3DSA:1.20.5.620 62 122 6.2E-26 T 09-03-2017 IPR028987 F-type ATP synthase subunit B-like, membrane domain RG43_RS25450 75e7ada38e15a23c696fd31fc2f9e66b 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 156 13.12 T 09-03-2017 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 RG43_RS25450 75e7ada38e15a23c696fd31fc2f9e66b 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 4.8E-40 T 09-03-2017 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 RG43_RS11995 30aa3e56cba6f01a06e40cf3d080ad59 178 ProDom PD035714 MEMBRANE REGULATOR YNIB TRANSMEMBRANE YFEABCD YFEE PROBABLE LOCUS ESCHERICHIA ECS2432 1 178 8.0E-100 T 09-03-2017 RG43_RS11995 30aa3e56cba6f01a06e40cf3d080ad59 178 Pfam PF14002 YniB-like protein 15 177 3.1E-77 T 09-03-2017 IPR025229 YniB-like protein RG43_RS03200 a0208dc3d23267de13c1be22fae15a7e 100 Pfam PF01541 GIY-YIG catalytic domain 4 75 3.7E-13 T 09-03-2017 IPR000305 GIY-YIG nuclease superfamily RG43_RS03200 a0208dc3d23267de13c1be22fae15a7e 100 Hamap MF_01029 UPF0213 protein YhbQ [yhbQ]. 1 92 32.479 T 09-03-2017 IPR022992 Uncharacterised protein family UPF0213, GIY-YIG endonuclease RG43_RS03200 a0208dc3d23267de13c1be22fae15a7e 100 SUPERFAMILY SSF82771 3 72 8.63E-11 T 09-03-2017 IPR000305 GIY-YIG nuclease superfamily RG43_RS10390 6a2855db3976925398482b744e59edf5 155 Pfam PF03245 Bacteriophage Rz lysis protein 30 154 2.3E-46 T 09-03-2017 IPR004929 Bacteriophage Rz lysis protein GO:0019076|GO:0019835 RG43_RS25435 e48c3498685547481d38ac4b6ecf0af5 126 Pfam PF03899 ATP synthase I chain 13 108 1.0E-14 T 09-03-2017 IPR005598 ATP synthase protein I RG43_RS02655 f906f683a445b3e45b21617295182e55 59 Pfam PF10831 Protein of unknown function (DUF2556) 1 53 5.0E-35 T 09-03-2017 IPR022540 Protein of unknown function DUF2556 RG43_RS02655 f906f683a445b3e45b21617295182e55 59 ProDom PD052549 YHDU TRANSMEMBRANE MEMBRANE PERIPLASMIC 1 53 6.0E-14 T 09-03-2017 IPR022540 Protein of unknown function DUF2556 RG43_RS26325 3c75211713c2697f01fa5dcf41d301bf 56 Pfam PF13260 Protein of unknown function (DUF4051) 1 50 4.8E-28 T 09-03-2017 IPR025125 Protein of unknown function DUF4051 RG43_RS03950 3c75211713c2697f01fa5dcf41d301bf 56 Pfam PF13260 Protein of unknown function (DUF4051) 1 50 4.8E-28 T 09-03-2017 IPR025125 Protein of unknown function DUF4051 RG43_RS08240 f4eb4d7cb66164480bde4b4c647dc70e 238 SUPERFAMILY SSF161098 17 223 6.28E-37 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS08240 f4eb4d7cb66164480bde4b4c647dc70e 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 21 122 2.4E-13 T 09-03-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RG43_RS08240 f4eb4d7cb66164480bde4b4c647dc70e 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 224 2.2E-15 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS08240 f4eb4d7cb66164480bde4b4c647dc70e 238 Gene3D G3DSA:1.10.3720.10 20 228 5.1E-38 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS07685 e8132fc59933e17a715e753771c482b7 332 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 8 316 8.1E-104 T 09-03-2017 IPR016833 Putative sodium bile acid cotransporter RG43_RS07685 e8132fc59933e17a715e753771c482b7 332 PIRSF PIRSF026166 1 332 4.2E-137 T 09-03-2017 IPR016833 Putative sodium bile acid cotransporter RG43_RS21710 e47f3ff68729ea481c12e98b3d184cdd 201 SMART SM00749 60 123 2.9E-13 T 09-03-2017 IPR014004 Transport-associated and nodulation domain, bacteria RG43_RS21710 e47f3ff68729ea481c12e98b3d184cdd 201 SMART SM00749 139 201 1.6E-10 T 09-03-2017 IPR014004 Transport-associated and nodulation domain, bacteria RG43_RS21710 e47f3ff68729ea481c12e98b3d184cdd 201 Pfam PF04972 BON domain 135 199 1.9E-19 T 09-03-2017 IPR007055 BON domain RG43_RS21710 e47f3ff68729ea481c12e98b3d184cdd 201 Pfam PF04972 BON domain 55 122 3.7E-20 T 09-03-2017 IPR007055 BON domain RG43_RS18250 d828095e3d783ed2b68e9cd3ab3bc0e6 460 SUPERFAMILY SSF56954 4 459 1.96E-105 T 09-03-2017 RG43_RS18250 d828095e3d783ed2b68e9cd3ab3bc0e6 460 Pfam PF02321 Outer membrane efflux protein 272 455 2.8E-29 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RG43_RS18250 d828095e3d783ed2b68e9cd3ab3bc0e6 460 Pfam PF02321 Outer membrane efflux protein 64 247 2.0E-22 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RG43_RS18250 d828095e3d783ed2b68e9cd3ab3bc0e6 460 Gene3D G3DSA:1.20.1600.10 53 460 2.9E-108 T 09-03-2017 RG43_RS18250 d828095e3d783ed2b68e9cd3ab3bc0e6 460 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 11 457 5.0E-114 T 09-03-2017 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 RG43_RS23570 4759ac87f5265942a3ac22158009d3b7 274 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 5 273 1.1E-142 T 09-03-2017 IPR018405 Phosphotransferase system, mannose/fructose/sorbose family IID component, subgroup GO:0009401|GO:0016021 RG43_RS23570 4759ac87f5265942a3ac22158009d3b7 274 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 5 273 1.3E-104 T 09-03-2017 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 RG43_RS10420 2e07267fedc17ce0862cbd32010cd6eb 585 Pfam PF03354 Phage Terminase 112 563 1.0E-84 T 09-03-2017 IPR005021 Phage terminase RG43_RS13300 d2f575cc960ee90ad15ca4bb5b1f71b2 499 Pfam PF00324 Amino acid permease 35 476 1.9E-126 T 09-03-2017 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 RG43_RS13300 d2f575cc960ee90ad15ca4bb5b1f71b2 499 PIRSF PIRSF006060 23 490 2.3E-66 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RG43_RS13300 d2f575cc960ee90ad15ca4bb5b1f71b2 499 ProSitePatterns PS00218 Amino acid permeases signature. 59 89 - T 09-03-2017 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 RG43_RS19715 91aae56438274f6c10bc7de966b2d634 112 Pfam PF13356 Domain of unknown function (DUF4102) 3 88 4.5E-16 T 09-03-2017 IPR025166 Domain of unknown function DUF4102 RG43_RS22090 6ceea571b6308d455ec3e91e2da74fc0 238 Gene3D G3DSA:2.40.230.30 25 237 8.9E-69 T 09-03-2017 RG43_RS22090 6ceea571b6308d455ec3e91e2da74fc0 238 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 22 236 7.9E-29 T 09-03-2017 IPR009331 Oligogalacturonate-specific porin RG43_RS07485 fce9d026c4ce145017a87cf6f984de59 338 PIRSF PIRSF000428 1 326 4.8E-108 T 09-03-2017 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 RG43_RS07485 fce9d026c4ce145017a87cf6f984de59 338 Pfam PF01515 Phosphate acetyl/butaryl transferase 1 320 3.3E-122 T 09-03-2017 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 RG43_RS07485 fce9d026c4ce145017a87cf6f984de59 338 SUPERFAMILY SSF53659 2 321 4.11E-81 T 09-03-2017 RG43_RS07485 fce9d026c4ce145017a87cf6f984de59 338 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 17 319 1.7E-98 T 09-03-2017 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 RG43_RS07485 fce9d026c4ce145017a87cf6f984de59 338 Gene3D G3DSA:3.40.50.10750 135 296 3.4E-62 T 09-03-2017 RG43_RS10285 6e09c66423b1dbf1cd34840c761961fd 93 Gene3D G3DSA:1.10.260.40 8 77 2.0E-15 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS10285 6e09c66423b1dbf1cd34840c761961fd 93 Pfam PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 15 66 3.0E-9 T 09-03-2017 IPR031856 Putative bacterial antitoxin YdaS RG43_RS18325 50608482f2a6bc3d1e0f41ad64306647 173 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 167 1.4E-33 T 09-03-2017 IPR007404 LexA-binding, inner membrane-associated putative hydrolase RG43_RS05065 e6f9494d5ee1a355ce54896682bdeaf3 252 Pfam PF01435 Peptidase family M48 71 245 1.3E-25 T 09-03-2017 IPR001915 Peptidase M48 GO:0004222|GO:0006508 RG43_RS05065 e6f9494d5ee1a355ce54896682bdeaf3 252 Gene3D G3DSA:3.30.2010.10 65 145 2.0E-23 T 09-03-2017 RG43_RS03795 534f673dd0c36d889ef2494f54373a32 162 ProDom PD054142 YEEW L0008-LIKE GENOME ECS4540 C4577 AEC77 ECS1407 Z5092 C1289 L0008 5 58 7.0E-22 T 09-03-2017 RG43_RS26170 534f673dd0c36d889ef2494f54373a32 162 ProDom PD054142 YEEW L0008-LIKE GENOME ECS4540 C4577 AEC77 ECS1407 Z5092 C1289 L0008 5 58 7.0E-22 T 09-03-2017 RG43_RS13305 b8d613980fd02220e2d4df6f83327ee9 353 SUPERFAMILY SSF51004 37 337 7.59E-40 T 09-03-2017 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain RG43_RS13305 b8d613980fd02220e2d4df6f83327ee9 353 Gene3D G3DSA:2.130.10.10 46 333 1.2E-36 T 09-03-2017 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RG43_RS06305 fbdddeaa75c6768b248f5e7e4155d86d 485 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 154 441 1.3E-88 T 09-03-2017 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 RG43_RS06305 fbdddeaa75c6768b248f5e7e4155d86d 485 Pfam PF02378 Phosphotransferase system, EIIC 113 396 3.5E-42 T 09-03-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 RG43_RS06305 fbdddeaa75c6768b248f5e7e4155d86d 485 Pfam PF00367 phosphotransferase system, EIIB 11 43 6.0E-15 T 09-03-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 RG43_RS06305 fbdddeaa75c6768b248f5e7e4155d86d 485 SUPERFAMILY SSF55604 8 82 1.19E-21 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RG43_RS06305 fbdddeaa75c6768b248f5e7e4155d86d 485 Gene3D G3DSA:3.30.1360.60 4 82 1.3E-27 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RG43_RS06305 fbdddeaa75c6768b248f5e7e4155d86d 485 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 09-03-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 RG43_RS05275 6b5d7a5eb3c5faee50ac4f760f4d88da 219 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 15 216 2.1E-72 T 09-03-2017 IPR005744 Hly-III GO:0016021|GO:0019835 RG43_RS05275 6b5d7a5eb3c5faee50ac4f760f4d88da 219 Pfam PF03006 Haemolysin-III related 12 209 2.1E-37 T 09-03-2017 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 RG43_RS03715 cd0786830a4b0bf93ef37797d5b43a8b 398 Pfam PF01548 Transposase 14 168 1.2E-43 T 09-03-2017 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 RG43_RS03715 cd0786830a4b0bf93ef37797d5b43a8b 398 Pfam PF02371 Transposase IS116/IS110/IS902 family 277 358 3.0E-22 T 09-03-2017 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 RG43_RS19925 48b9192e09f7e544865f7fe8f156fc46 164 Pfam PF06069 PerC transcriptional activator 100 154 9.8E-10 T 09-03-2017 IPR024684 Transcriptional activator PerC/bacteriophage SfV Orf40 RG43_RS19925 48b9192e09f7e544865f7fe8f156fc46 164 ProDom PD096295 YFDN SB43 ORF40 3 164 2.0E-83 T 09-03-2017 IPR020344 Bacteriophage SfV, Orf40 RG43_RS17345 9e441c32db8af40efbbc54336b0dd9dc 37 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 29 2.4E-20 T 09-03-2017 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 RG43_RS17345 9e441c32db8af40efbbc54336b0dd9dc 37 Pfam PF08173 Membrane bound YbgT-like protein 1 26 2.8E-15 T 09-03-2017 IPR012994 Membrane bound YbgT-like RG43_RS25025 8b2cdb5a9df1d1419ebf54b5739032ee 165 Pfam PF06092 Enterobacterial putative membrane protein (DUF943) 3 152 6.0E-31 T 09-03-2017 IPR010351 Protein of unknown function DUF943 RG43_RS10405 5b0ef17e9d4a641606879964702fa5fd 116 Pfam PF01844 HNH endonuclease 66 112 8.5E-17 T 09-03-2017 IPR002711 HNH endonuclease GO:0003676|GO:0004519 RG43_RS10405 5b0ef17e9d4a641606879964702fa5fd 116 SMART SM00507 53 107 1.6E-13 T 09-03-2017 IPR003615 HNH nuclease RG43_RS15195 40c41db4cb8a012c2a850d41126dce14 231 Pfam PF13860 FlgD Ig-like domain 119 189 1.2E-23 T 09-03-2017 IPR025965 FlgD Ig-like domain RG43_RS15195 40c41db4cb8a012c2a850d41126dce14 231 Pfam PF03963 Flagellar hook capping protein - N-terminal region 8 79 7.3E-25 T 09-03-2017 IPR005648 Flagellar hook capping protein RG43_RS15195 40c41db4cb8a012c2a850d41126dce14 231 Pfam PF13861 FlgD Tudor-like domain 87 228 2.2E-16 T 09-03-2017 IPR025963 FlgD Tudor-like domain RG43_RS15530 1dcd6d92651c44a7234a28522f3bf66b 57 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 32 52 9.2E-10 T 09-03-2017 IPR019626 Stress-induced protein, KGG, repeat RG43_RS15530 1dcd6d92651c44a7234a28522f3bf66b 57 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 10 30 1.8E-9 T 09-03-2017 IPR019626 Stress-induced protein, KGG, repeat RG43_RS01875 f91dee65c7f6bc9ff06a1d32394a1598 297 Pfam PF04754 Putative transposase, YhgA-like 8 209 5.2E-88 T 09-03-2017 IPR006842 Transposase (putative), YhgA-like RG43_RS01875 f91dee65c7f6bc9ff06a1d32394a1598 297 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 9 294 1.0E-51 T 09-03-2017 IPR010106 Conserved hypothetical protein CHP01784 RG43_RS14480 d3edc21a8805c9a8d8634ea762e5c4ce 269 Pfam PF13369 Transglutaminase-like superfamily 33 184 8.7E-40 T 09-03-2017 IPR032698 Protein SirB1, N-terminal RG43_RS14480 d3edc21a8805c9a8d8634ea762e5c4ce 269 Gene3D G3DSA:1.25.40.10 188 258 6.5E-5 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS14480 d3edc21a8805c9a8d8634ea762e5c4ce 269 Pfam PF13371 Tetratricopeptide repeat 187 259 5.3E-27 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RG43_RS25760 ea3bb3b2b3d8f47b24456920edfefe29 115 Pfam PF02656 Domain of unknown function (DUF202) 13 79 1.2E-15 T 09-03-2017 IPR003807 Domain of unknown function DUF202 RG43_RS23685 39c397f8198dc7613a61637b2d4c7893 141 ProDom PD097062 ZINC RESISTANCE-ASSOCIATED PERIPLASMIC PRECURSOR SIGNAL YJAI SEQUENCING DIRECT DFFA 1 115 6.0E-53 T 09-03-2017 IPR020365 Zinc resistance-associated protein, ZraP GO:0008270|GO:0042597 RG43_RS23685 39c397f8198dc7613a61637b2d4c7893 141 Pfam PF13801 Heavy-metal resistance 9 120 6.6E-21 T 09-03-2017 IPR025961 Heavy-metal resistance protein RG43_RS13555 df4199bcfb2b66650714dfbbf6550f28 298 Pfam PF01148 Cytidylyltransferase family 38 295 1.4E-63 T 09-03-2017 RG43_RS13555 df4199bcfb2b66650714dfbbf6550f28 298 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 254 280 - T 09-03-2017 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981 RG43_RS11855 d92a3d9a9590840349ad3da5c388f52f 235 Pfam PF09335 SNARE associated Golgi protein 80 197 1.1E-24 T 09-03-2017 IPR032816 SNARE associated Golgi protein RG43_RS07680 40a7020ae00c1ec205d5229a05bdacc3 72 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 14 68 4.0E-25 T 09-03-2017 IPR024530 Putative quorum-sensing-regulated virulence factor RG43_RS07680 40a7020ae00c1ec205d5229a05bdacc3 72 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 3 68 2.4E-29 T 09-03-2017 IPR024530 Putative quorum-sensing-regulated virulence factor RG43_RS01155 d6740a2ff0bde6d782dcd0b87eecd347 779 PRINTS PR01440 Cellulose synthase subunit B signature 100 121 1.8E-32 T 09-03-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 RG43_RS01155 d6740a2ff0bde6d782dcd0b87eecd347 779 PRINTS PR01440 Cellulose synthase subunit B signature 190 211 1.8E-32 T 09-03-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 RG43_RS01155 d6740a2ff0bde6d782dcd0b87eecd347 779 PRINTS PR01440 Cellulose synthase subunit B signature 566 586 1.8E-32 T 09-03-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 RG43_RS01155 d6740a2ff0bde6d782dcd0b87eecd347 779 PRINTS PR01440 Cellulose synthase subunit B signature 232 255 1.8E-32 T 09-03-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 RG43_RS01155 d6740a2ff0bde6d782dcd0b87eecd347 779 PRINTS PR01440 Cellulose synthase subunit B signature 313 334 1.8E-32 T 09-03-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 RG43_RS01155 d6740a2ff0bde6d782dcd0b87eecd347 779 PRINTS PR01440 Cellulose synthase subunit B signature 529 548 1.8E-32 T 09-03-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 RG43_RS01155 d6740a2ff0bde6d782dcd0b87eecd347 779 PRINTS PR01440 Cellulose synthase subunit B signature 396 417 1.8E-32 T 09-03-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 RG43_RS01155 d6740a2ff0bde6d782dcd0b87eecd347 779 Pfam PF03170 Bacterial cellulose synthase subunit 71 680 2.2E-220 T 09-03-2017 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 RG43_RS10170 1b55a03022a11b582186cd43a159f9d6 267 Gene3D G3DSA:3.40.50.1820 180 240 3.2E-32 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS10170 1b55a03022a11b582186cd43a159f9d6 267 Gene3D G3DSA:3.40.50.1820 8 126 3.2E-32 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS10170 1b55a03022a11b582186cd43a159f9d6 267 SUPERFAMILY SSF53474 9 246 1.88E-46 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold RG43_RS10170 1b55a03022a11b582186cd43a159f9d6 267 Pfam PF00975 Thioesterase domain 20 249 9.1E-67 T 09-03-2017 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 RG43_RS03705 a727aa5c096aa666e639ded35f547489 277 Pfam PF12787 EcsC protein family 12 255 4.2E-39 T 09-03-2017 IPR024787 EcsC protein RG43_RS07895 7e0148b9955b55d6cbdc9ebbfda702b9 314 Pfam PF03547 Membrane transport protein 166 307 1.7E-28 T 09-03-2017 IPR004776 Membrane transport protein GO:0016021|GO:0055085 RG43_RS07895 7e0148b9955b55d6cbdc9ebbfda702b9 314 Pfam PF03547 Membrane transport protein 6 161 8.1E-35 T 09-03-2017 IPR004776 Membrane transport protein GO:0016021|GO:0055085 RG43_RS24885 90f97b03a077d4362bb5ed432662ba8d 496 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 21 439 1.3E-140 T 09-03-2017 IPR002823 Protein of unknown function DUF112, transmembrane RG43_RS19550 65d3f06a88e100d7b740419baaa61261 197 Pfam PF04224 Protein of unknown function, DUF417 3 182 1.4E-79 T 09-03-2017 IPR007339 Protein of unknown function DUF417 RG43_RS04760 ae4c674f6353ca8ae017ac3abeefecdb 41 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 40 5.3E-13 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RG43_RS04760 ae4c674f6353ca8ae017ac3abeefecdb 41 SUPERFAMILY SSF46785 1 40 1.31E-10 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS04760 ae4c674f6353ca8ae017ac3abeefecdb 41 Gene3D G3DSA:1.10.10.10 1 40 3.6E-13 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS07565 52763e221e549331e25fae0a4a8009fd 149 Pfam PF11143 Protein of unknown function (DUF2919) 6 145 7.4E-49 T 09-03-2017 IPR021318 Protein of unknown function DUF2919 RG43_RS16965 e53a8ea5e0b9a7780da18e04e5ddc4bd 71 PIRSF PIRSF030786 1 71 1.5E-45 T 09-03-2017 IPR007054 Lysis protein S RG43_RS16965 e53a8ea5e0b9a7780da18e04e5ddc4bd 71 Pfam PF04971 Bacteriophage P21 holin S 4 70 6.5E-50 T 09-03-2017 IPR007054 Lysis protein S RG43_RS24425 f48dc24e26bc4cfe13a8c3b0f54a7b21 97 SMART SM00530 6 63 6.8E-7 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RG43_RS24425 f48dc24e26bc4cfe13a8c3b0f54a7b21 97 SUPERFAMILY SSF47413 3 52 1.37E-9 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS24425 f48dc24e26bc4cfe13a8c3b0f54a7b21 97 Gene3D G3DSA:1.10.260.40 5 67 4.5E-13 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RG43_RS24425 f48dc24e26bc4cfe13a8c3b0f54a7b21 97 Pfam PF01381 Helix-turn-helix 7 49 4.4E-8 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RG43_RS06010 2424225ce61de3c9de7bb378551073bc 423 Gene3D G3DSA:3.50.50.60 4 230 1.0E-41 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS06010 2424225ce61de3c9de7bb378551073bc 423 Pfam PF12831 FAD dependent oxidoreductase 6 150 1.0E-9 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS06010 2424225ce61de3c9de7bb378551073bc 423 SUPERFAMILY SSF54373 175 277 2.59E-17 T 09-03-2017 RG43_RS06010 2424225ce61de3c9de7bb378551073bc 423 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 5.4E-7 T 09-03-2017 RG43_RS06010 2424225ce61de3c9de7bb378551073bc 423 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 146 161 5.4E-7 T 09-03-2017 RG43_RS06010 2424225ce61de3c9de7bb378551073bc 423 Gene3D G3DSA:3.30.9.10 231 336 3.1E-4 T 09-03-2017 RG43_RS06010 2424225ce61de3c9de7bb378551073bc 423 SUPERFAMILY SSF51905 2 175 2.8E-39 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS06010 2424225ce61de3c9de7bb378551073bc 423 SUPERFAMILY SSF51905 280 404 2.8E-39 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS21880 9ce24f2f0fbd87b62f4d81649feefcab 100 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 37 93 8.3E-18 T 09-03-2017 IPR025528 BrnA antitoxin of type II toxin-antitoxin system RG43_RS14175 2c32de78c629fd09f3a48044ecd04619 157 Gene3D G3DSA:1.20.1260.10 2 156 1.0E-59 T 09-03-2017 IPR012347 Ferritin-related RG43_RS14175 2c32de78c629fd09f3a48044ecd04619 157 Pfam PF05974 Domain of unknown function (DUF892) 2 154 1.4E-50 T 09-03-2017 IPR010287 Domain of unknown function DUF892 RG43_RS14175 2c32de78c629fd09f3a48044ecd04619 157 SUPERFAMILY SSF47240 3 150 3.54E-45 T 09-03-2017 IPR009078 Ferritin-like superfamily RG43_RS13505 8a48076edbaee86b605bd21ac9d94113 49 PRINTS PR00281 Hok/Gef cell toxic protein family signature 25 47 5.8E-13 T 09-03-2017 IPR000021 Hok/gef cell toxic protein GO:0016020 RG43_RS13505 8a48076edbaee86b605bd21ac9d94113 49 PRINTS PR00281 Hok/Gef cell toxic protein family signature 5 23 5.8E-13 T 09-03-2017 IPR000021 Hok/gef cell toxic protein GO:0016020 RG43_RS13505 8a48076edbaee86b605bd21ac9d94113 49 Pfam PF01848 Hok/gef family 6 46 7.0E-21 T 09-03-2017 IPR000021 Hok/gef cell toxic protein GO:0016020 RG43_RS13505 8a48076edbaee86b605bd21ac9d94113 49 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 1 49 3.0E-9 T 09-03-2017 IPR000021 Hok/gef cell toxic protein GO:0016020 RG43_RS13505 8a48076edbaee86b605bd21ac9d94113 49 ProSitePatterns PS00556 Hok/gef family cell toxic proteins signature. 10 29 - T 09-03-2017 IPR018084 Hok/gef cell toxic protein, conserved site GO:0016020 RG43_RS00705 bc508bae85f7bc26816905299cfc53d4 551 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 6 544 5.6E-240 T 09-03-2017 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 RG43_RS00705 bc508bae85f7bc26816905299cfc53d4 551 Pfam PF02652 L-lactate permease 16 542 2.4E-233 T 09-03-2017 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 RG43_RS00855 01f108b0405c572f66ecda6a8d48c448 157 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 18 145 9.2E-30 T 09-03-2017 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component RG43_RS02790 1e53a06f337176a1b4bd9e96a8ebbd36 87 SUPERFAMILY SSF159871 3 87 2.75E-27 T 09-03-2017 IPR010854 Domain of unknown function DUF1471 RG43_RS02790 1e53a06f337176a1b4bd9e96a8ebbd36 87 Pfam PF07338 Protein of unknown function (DUF1471) 35 87 2.8E-22 T 09-03-2017 IPR010854 Domain of unknown function DUF1471 RG43_RS02790 1e53a06f337176a1b4bd9e96a8ebbd36 87 Gene3D G3DSA:3.30.1660.10 18 87 1.5E-31 T 09-03-2017 IPR025543 Dodecin-like RG43_RS10430 2c460ff5ace93bdace0f36d37e07d5e4 413 Pfam PF04860 Phage portal protein 47 373 4.3E-99 T 09-03-2017 IPR006944 Bacteriophage/Gene transfer agent portal protein RG43_RS10430 2c460ff5ace93bdace0f36d37e07d5e4 413 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 39 379 7.6E-78 T 09-03-2017 IPR006427 Phage portal protein, HK97 RG43_RS08145 fe55c426377d9d25b7954aaf7fc8c402 92 Pfam PF08891 YfcL protein 4 87 7.6E-35 T 09-03-2017 IPR014987 Uncharacterised protein family YfcL RG43_RS00325 eb505ad2f372c062cf482044c785dce4 263 Pfam PF10670 Domain of unknown function (DUF4198) 20 238 2.7E-22 T 09-03-2017 IPR019613 Protein of unknown function DUF4198 RG43_RS10495 3c2e1b2a7968bcf25faa5d356b95a103 232 Pfam PF05100 Phage minor tail protein L 29 230 1.5E-97 T 09-03-2017 IPR006487 Bacteriophage lambda, GpL, minor tail RG43_RS10495 3c2e1b2a7968bcf25faa5d356b95a103 232 TIGRFAM TIGR01600 phage_tail_L: phage minor tail protein L 12 230 3.3E-100 T 09-03-2017 IPR006487 Bacteriophage lambda, GpL, minor tail RG43_RS10660 72e2520f273898f23d559569705062d9 75 Pfam PF10733 Protein of unknown function (DUF2525) 18 75 2.3E-33 T 09-03-2017 IPR019669 Uncharacterised bacterial stress protein YodD RG43_RS25020 f393e85ce763919e48a5b3b3de9b2f60 282 Pfam PF11692 Protein of unknown function (DUF3289) 10 278 3.0E-82 T 09-03-2017 IPR017483 Conserved hypothetical protein CHP03034 RG43_RS25020 f393e85ce763919e48a5b3b3de9b2f60 282 TIGRFAM TIGR03034 TIGR03034: conserved hypothetical protein 8 280 2.6E-122 T 09-03-2017 IPR017483 Conserved hypothetical protein CHP03034 RG43_RS12300 101a3480fa56ec0393acf89685440ecd 536 SUPERFAMILY SSF51905 1 269 3.37E-16 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS12300 101a3480fa56ec0393acf89685440ecd 536 Gene3D G3DSA:3.40.50.720 2 87 2.9E-26 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS12300 101a3480fa56ec0393acf89685440ecd 536 Gene3D G3DSA:3.40.50.720 136 221 2.9E-26 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS12300 101a3480fa56ec0393acf89685440ecd 536 Pfam PF13454 FAD-NAD(P)-binding 5 164 6.2E-30 T 09-03-2017 RG43_RS19800 7c5ed2dc1eea65573737eaad764d8f68 1021 TIGRFAM TIGR01541 tape_meas_lam_C: phage tail tape measure protein, lambda family 656 981 2.1E-86 T 09-03-2017 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal RG43_RS19800 7c5ed2dc1eea65573737eaad764d8f68 1021 Pfam PF06791 Prophage tail length tape measure protein 228 426 1.3E-51 T 09-03-2017 IPR009628 Bacteriophage lambda, GpH, tail tape measure, N-terminal RG43_RS19800 7c5ed2dc1eea65573737eaad764d8f68 1021 Pfam PF09718 Lambda phage tail tape-measure protein (Tape_meas_lam_C) 811 885 6.8E-22 T 09-03-2017 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal RG43_RS10395 c0e59dcf77c0238edb1831473c5c12e2 161 SUPERFAMILY SSF55729 41 132 1.75E-7 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS10395 c0e59dcf77c0238edb1831473c5c12e2 161 Gene3D G3DSA:3.40.630.30 35 132 4.3E-6 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase RG43_RS05685 ece55517e08de7b1daf880cba0c0c148 468 Pfam PF05488 PAAR motif 10 77 5.6E-8 T 09-03-2017 IPR008727 PAAR motif RG43_RS18505 5dad5234720800dc4822c155d4e6442a 338 Pfam PF03895 YadA-like C-terminal region 262 338 8.0E-17 T 09-03-2017 IPR005594 YadA-like, C-terminal RG43_RS18505 5dad5234720800dc4822c155d4e6442a 338 SUPERFAMILY SSF54523 243 338 9.89E-21 T 09-03-2017 RG43_RS18505 5dad5234720800dc4822c155d4e6442a 338 Gene3D G3DSA:3.30.1300.30 240 338 2.7E-24 T 09-03-2017 RG43_RS13510 019a83d85b1398e7863c52080aa6962c 57 ProDom PD052090 YDCA PRECURSOR SIGNAL ECS2024 1 57 5.0E-25 T 09-03-2017 RG43_RS10465 0b16cadd78b73e1477530c9aef253b46 114 Pfam PF11367 Protein of unknown function (DUF3168) 10 110 7.9E-11 T 09-03-2017 IPR021508 Protein of unknown function DUF3168 RG43_RS10020 d36eac599f4ffa6e080a2bbdc8bedb19 344 Gene3D G3DSA:3.20.20.140 4 343 8.6E-98 T 09-03-2017 RG43_RS10020 d36eac599f4ffa6e080a2bbdc8bedb19 344 Pfam PF02126 Phosphotriesterase family 14 343 9.2E-47 T 09-03-2017 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 RG43_RS10020 d36eac599f4ffa6e080a2bbdc8bedb19 344 ProSitePatterns PS01322 Phosphotriesterase family signature 1. 18 26 - T 09-03-2017 IPR017947 Aryldialkylphosphatase, zinc-binding site GO:0008270|GO:0009056|GO:0016788 RG43_RS10020 d36eac599f4ffa6e080a2bbdc8bedb19 344 SUPERFAMILY SSF51556 3 42 1.21E-72 T 09-03-2017 IPR032466 Metal-dependent hydrolase RG43_RS10020 d36eac599f4ffa6e080a2bbdc8bedb19 344 SUPERFAMILY SSF51556 69 343 1.21E-72 T 09-03-2017 IPR032466 Metal-dependent hydrolase RG43_RS11865 38d0182dbc56e62ab50533a9893ff761 236 Pfam PF09335 SNARE associated Golgi protein 63 179 2.5E-27 T 09-03-2017 IPR032816 SNARE associated Golgi protein RG43_RS12525 adf1584b4034fd099d71b6e49bbf60f9 146 Pfam PF10754 Protein of unknown function (DUF2569) 6 144 2.4E-40 T 09-03-2017 IPR019690 Protein of unknown function DUF2569 RG43_RS00750 b8f498bdde20ee9b11f4a84d2c28e5f1 120 Pfam PF11742 Protein of unknown function (DUF3302) 3 78 1.6E-40 T 09-03-2017 IPR011223 Uncharacterised conserved protein UCP028770 RG43_RS00750 b8f498bdde20ee9b11f4a84d2c28e5f1 120 PIRSF PIRSF028770 1 120 6.2E-66 T 09-03-2017 IPR011223 Uncharacterised conserved protein UCP028770 RG43_RS21975 46a544619d067843b7b8919611c042b6 227 Pfam PF07670 Nucleoside recognition 85 178 4.2E-6 T 09-03-2017 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 RG43_RS12445 2732d501db3bbd3355d58a6104b0f34d 155 Pfam PF05433 Glycine zipper 2TM domain 62 102 1.2E-7 T 09-03-2017 IPR008816 Glycine zipper 2TM domain GO:0019867 RG43_RS01060 e49ff7896271534454d24d1cfaf10e01 339 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 336 1.8E-46 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS01060 e49ff7896271534454d24d1cfaf10e01 339 SUPERFAMILY SSF161098 89 160 1.8E-21 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS01060 e49ff7896271534454d24d1cfaf10e01 339 SUPERFAMILY SSF161098 200 322 1.8E-21 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS01060 e49ff7896271534454d24d1cfaf10e01 339 Gene3D G3DSA:1.10.3720.10 87 162 9.0E-22 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS01060 e49ff7896271534454d24d1cfaf10e01 339 Gene3D G3DSA:1.10.3720.10 203 332 9.0E-22 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RG43_RS03430 3d7a603abccaec02e7de223167d3d9b6 118 Pfam PF05656 Protein of unknown function (DUF805) 11 113 1.4E-33 T 09-03-2017 IPR008523 Protein of unknown function DUF805 GO:0016021 RG43_RS19130 7cdd1923f1c5529f9afaf620e6bf5ebe 385 SUPERFAMILY SSF56601 33 361 1.68E-68 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like RG43_RS19130 7cdd1923f1c5529f9afaf620e6bf5ebe 385 Gene3D G3DSA:3.40.710.10 16 371 1.1E-69 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like RG43_RS19130 7cdd1923f1c5529f9afaf620e6bf5ebe 385 Pfam PF00144 Beta-lactamase 45 357 1.9E-64 T 09-03-2017 IPR001466 Beta-lactamase-related RG43_RS00240 8b9c507e62950b50c0613a76e0259a2f 113 SUPERFAMILY SSF141488 28 106 4.05E-11 T 09-03-2017 IPR018660 C-type lysozyme, inhibitor RG43_RS00240 8b9c507e62950b50c0613a76e0259a2f 113 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 33 103 1.4E-11 T 09-03-2017 IPR018660 C-type lysozyme, inhibitor RG43_RS21560 33b5468d9c374147fd166dca442d1b52 450 PIRSF PIRSF004548 1 447 9.3E-183 T 09-03-2017 IPR010364 Uncharacterised protein family, inner membrane CreD RG43_RS21560 33b5468d9c374147fd166dca442d1b52 450 Pfam PF06123 Inner membrane protein CreD 6 427 1.1E-144 T 09-03-2017 IPR010364 Uncharacterised protein family, inner membrane CreD RG43_RS25925 34f1cd395d14d9f7fc48e8a49e9307ea 159 ProDom PD012854 PLASMID KLCA ANTIRESTRICTION YFJX YCIB ARDB STABLE YFEB Z1216 C0275 62 159 6.0E-54 T 09-03-2017 IPR004914 Antirestriction protein RG43_RS25925 34f1cd395d14d9f7fc48e8a49e9307ea 159 Pfam PF03230 Antirestriction protein 64 159 2.2E-36 T 09-03-2017 IPR004914 Antirestriction protein RG43_RS02925 6aa8c3f6bc3d4c9b66bfec303e76f0f9 210 Pfam PF10707 PhoP regulatory network protein YrbL 2 185 6.0E-63 T 09-03-2017 IPR019647 PhoP regulatory network protein YrbL RG43_RS02925 6aa8c3f6bc3d4c9b66bfec303e76f0f9 210 SUPERFAMILY SSF56112 13 152 9.09E-9 T 09-03-2017 IPR011009 Protein kinase-like domain RG43_RS22920 4ab13bfa7f38d4245489085048fe75b8 57 Pfam PF10753 Protein of unknown function (DUF2566) 4 57 2.1E-25 T 09-03-2017 IPR019689 Toxin GhoT/OrtT RG43_RS19975 8a8e3d3468d0b7e46f0642dc1151fbe3 274 Pfam PF10065 Uncharacterized conserved protein (DUF2303) 7 272 6.8E-93 T 09-03-2017 IPR019276 Protein of unkown function DUF2303 RG43_RS19105 b78337c882e26e8c187a8d3a73eb3305 114 Pfam PF10953 Protein of unknown function (DUF2754) 45 114 6.6E-47 T 09-03-2017 IPR020490 Uncharacterised protein family YaiZ RG43_RS19105 b78337c882e26e8c187a8d3a73eb3305 114 ProDom PD073772 MEMBRANE TRANSMEMBRANE YAIZ INNER ECS0430 GENOME 45 114 2.0E-35 T 09-03-2017 IPR020490 Uncharacterised protein family YaiZ RG43_RS21955 3ff47eb6656b66d93c5cc779bf9d2e16 85 Pfam PF11823 Protein of unknown function (DUF3343) 3 56 9.3E-12 T 09-03-2017 IPR021778 Protein of unknown function DUF3343 RG43_RS00935 cbd3af7232d1e8e202cf9784fee13d95 331 Hamap MF_01949 O-acetyltransferase WecH [wecH]. 1 331 38.258 T 09-03-2017 IPR032905 O-acetyltransferase WecH GO:0009246|GO:0016413 RG43_RS00935 cbd3af7232d1e8e202cf9784fee13d95 331 Pfam PF01757 Acyltransferase family 5 318 1.7E-34 T 09-03-2017 IPR002656 Acyltransferase 3 GO:0016747 RG43_RS17530 d9c12643a115c4dd60769c49be3c25fa 109 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 16 76 5.9E-20 T 09-03-2017 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 RG43_RS10450 87151a8f331c84eef98ab29e70331409 101 Pfam PF05135 Phage gp6-like head-tail connector protein 3 81 1.1E-13 T 09-03-2017 IPR021146 Phage gp6-like head-tail connector protein RG43_RS25170 8a7d19069f10c4f1f1b61538b9fa9d10 450 Hamap MF_01003 Probable ECA polymerase [wzyE]. 1 448 42.978 T 09-03-2017 IPR010691 Probable ECA polymerase WzyE GO:0009246|GO:0016021 RG43_RS25170 8a7d19069f10c4f1f1b61538b9fa9d10 450 Pfam PF06899 WzyE protein, O-antigen assembly polymerase 1 446 1.1E-263 T 09-03-2017 RG43_RS24830 ca4acf2e96d03806661ad881a667621e 171 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 143 19.479 T 09-03-2017 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 RG43_RS24830 ca4acf2e96d03806661ad881a667621e 171 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 6.2E-32 T 09-03-2017 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 RG43_RS24830 ca4acf2e96d03806661ad881a667621e 171 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 1.3E-33 T 09-03-2017 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 RG43_RS24830 ca4acf2e96d03806661ad881a667621e 171 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 1.3E-33 T 09-03-2017 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 RG43_RS24830 ca4acf2e96d03806661ad881a667621e 171 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 1.3E-33 T 09-03-2017 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 RG43_RS13630 1ff566c450dce3bddc4bede3bcd78349 140 Pfam PF03724 META domain 28 131 3.5E-23 T 09-03-2017 IPR005184 Domain of unknown function DUF306, Meta/HslJ RG43_RS11490 451eb0ab172f6de5db3b6d9d86ca8e51 47 Pfam PF13998 MgrB protein 19 47 2.2E-17 T 09-03-2017 IPR020907 PhoP/PhoQ regulator MgrB RG43_RS11490 451eb0ab172f6de5db3b6d9d86ca8e51 47 Hamap MF_01596 PhoP/PhoQ regulator MgrB [mgrB]. 1 47 21.855 T 09-03-2017 IPR020907 PhoP/PhoQ regulator MgrB RG43_RS22555 8cc7d6a1740a55975d46c5b804496b70 465 Pfam PF03611 PTS system sugar-specific permease component 15 410 8.9E-123 T 09-03-2017 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 RG43_RS22810 f103bc322d57d503314f3feb1c2aeaf0 84 Pfam PF12035 Protein of unknown function (DUF3521) 1 32 1.3E-12 T 09-03-2017 IPR021909 Protein of unknown function DUF3521 RG43_RS24510 df05ac3c35764faf5ba144cae46226b3 104 Pfam PF05336 Domain of unknown function (DUF718) 3 103 7.1E-30 T 09-03-2017 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 RG43_RS24510 df05ac3c35764faf5ba144cae46226b3 104 Hamap MF_01663 L-rhamnose mutarotase [rhaM]. 1 104 33.054 T 09-03-2017 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 RG43_RS24510 df05ac3c35764faf5ba144cae46226b3 104 TIGRFAM TIGR02625 YiiL_rotase: L-rhamnose mutarotase 3 103 2.5E-58 T 09-03-2017 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 RG43_RS24510 df05ac3c35764faf5ba144cae46226b3 104 SUPERFAMILY SSF54909 1 104 2.09E-38 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel RG43_RS24935 71750ab58b7260161c7f9c5e29858c2e 407 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 10 399 5.8E-14 T 09-03-2017 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 RG43_RS12015 21badac295a1b868bcdb2056747515af 252 Pfam PF04338 Protein of unknown function, DUF481 48 251 1.5E-55 T 09-03-2017 IPR007433 Protein of unknown function DUF481 RG43_RS16945 9f2d5cf8a3f529c116551fca6efc3784 64 Pfam PF13132 Domain of unknown function (DUF3950) 21 49 2.7E-19 T 09-03-2017 IPR025030 Domain of unknown function DUF3950 RG43_RS19080 be503e74557f91e4264acde6c8569269 112 Pfam PF07769 psiF repeat 33 65 1.6E-18 T 09-03-2017 IPR011690 Phosphate-starvation-induced PsiF repeat RG43_RS19080 be503e74557f91e4264acde6c8569269 112 Pfam PF07769 psiF repeat 77 109 7.3E-16 T 09-03-2017 IPR011690 Phosphate-starvation-induced PsiF repeat RG43_RS03445 57cdfd3896ab8ea7ca2141046ebb7fba 130 Pfam PF07681 DoxX 9 87 7.2E-18 T 09-03-2017 IPR032808 DoxX family RG43_RS24255 e10492265243c5ed4aec86f18fb4d84a 176 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 7 143 9.3E-65 T 09-03-2017 IPR006521 Tail protein I RG43_RS24255 e10492265243c5ed4aec86f18fb4d84a 176 Pfam PF09684 Phage tail protein (Tail_P2_I) 7 143 3.2E-53 T 09-03-2017 IPR006521 Tail protein I RG43_RS00740 ceaf97f755261c115865ed085d5f8f89 73 Pfam PF15954 Domain of unknown function (DUF4759) 6 25 1.4E-6 T 09-03-2017 IPR031873 Domain of unknown function DUF4759 RG43_RS13530 43279222346a40896f54a19fe2a4708e 266 Pfam PF02698 DUF218 domain 40 173 8.2E-16 T 09-03-2017 IPR003848 Domain of unknown function DUF218 RG43_RS13530 43279222346a40896f54a19fe2a4708e 266 Gene3D G3DSA:3.40.50.620 31 180 2.9E-56 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RG43_RS12670 c2ceaf75bf5a9380cb2daf7ec69ba752 344 Pfam PF01594 Domain of unknown function DUF20 14 328 5.5E-77 T 09-03-2017 IPR002549 Transmembrane protein TqsA-like RG43_RS05875 d402373386ab2ea6d2299546ab240c2f 181 Hamap MF_01104 Protein Syd [syd]. 3 181 35.928 T 09-03-2017 IPR009948 Syd GO:0009898 RG43_RS05875 d402373386ab2ea6d2299546ab240c2f 181 Pfam PF07348 Syd protein (SUKH-2) 7 179 1.7E-72 T 09-03-2017 IPR009948 Syd GO:0009898 RG43_RS24930 3831c5888fedb26f394af969be5cdb3c 129 Gene3D G3DSA:3.10.490.10 3 80 9.7E-7 T 09-03-2017 IPR013024 Butirosin biosynthesis, BtrG-like RG43_RS23500 efbaad149dadc99cc1ccf3f1776ff225 698 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 30 691 1.0E-270 T 09-03-2017 IPR010344 Exopolysaccharide biosynthesis protein YbjH RG43_RS05105 58c944c8cc59af3ce1ff80fca49cc1d7 169 Gene3D G3DSA:1.20.120.330 2 168 8.6E-63 T 09-03-2017 RG43_RS05105 58c944c8cc59af3ce1ff80fca49cc1d7 169 SUPERFAMILY SSF158668 2 167 1.96E-53 T 09-03-2017 RG43_RS05105 58c944c8cc59af3ce1ff80fca49cc1d7 169 Pfam PF05068 Mannitol repressor 5 167 2.0E-51 T 09-03-2017 IPR007761 Mannitol repressor RG43_RS12930 db6fd5d49060fa7498f2e761ab839773 304 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 1 280 4.4E-56 T 09-03-2017 IPR021134 Bestrophin/UPF0187 Reactome: R-HSA-2672351 RG43_RS24420 05aa686e1d6faacbd1cdab7b2d074f82 90 Pfam PF10743 Regulatory phage protein cox 9 90 6.0E-34 T 09-03-2017 IPR019679 Bacteriophage P2, regulatory protein Cox RG43_RS21620 a4ebe00e8dbb4fe9039f6e742ef1b87e 110 PIRSF PIRSF039032 1 110 4.4E-39 T 09-03-2017 IPR009387 Toxin HigB-2 RG43_RS21620 a4ebe00e8dbb4fe9039f6e742ef1b87e 110 Pfam PF06296 RelE toxin of RelE / RelB toxin-antitoxin system 12 106 6.1E-9 T 09-03-2017 IPR009387 Toxin HigB-2 RG43_RS14005 2f7611af1672614622d32d671b386112 57 Hamap MF_01641 UPF0509 protein YciZ [yciZ]. 1 57 25.98 T 09-03-2017 IPR020887 Uncharacterised protein family UPF0509 RG43_RS14125 ff8d008090f07da2ac008475b8c8fbcf 631 Pfam PF09972 Predicted membrane protein (DUF2207) 35 573 9.9E-69 T 09-03-2017 IPR018702 Protein of unknown function DUF2207, membrane RG43_RS17090 c946919da67d8b3b67a099c308deef9c 60 Pfam PF07026 Protein of unknown function (DUF1317) 1 59 6.3E-40 T 09-03-2017 IPR009750 Protein of unknown function DUF1317 RG43_RS07750 74a7ebca863734f45e073ea14947c9cd 130 SUPERFAMILY SSF46955 5 82 1.83E-13 T 09-03-2017 IPR009061 Putative DNA-binding domain RG43_RS07750 74a7ebca863734f45e073ea14947c9cd 130 Gene3D G3DSA:1.10.10.10 7 48 9.7E-8 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS07750 74a7ebca863734f45e073ea14947c9cd 130 Pfam PF07037 Putative transcription regulator (DUF1323) 8 129 2.0E-54 T 09-03-2017 IPR010749 Protein of unknown function DUF1323 RG43_RS07750 74a7ebca863734f45e073ea14947c9cd 130 ProDom PD060594 TRANSCRIPTION YFED YFEC DNA-BINDING REGULATION NEGATIVE REGULATOR STY2653 ECS3274 STY2652 8 129 4.0E-57 T 09-03-2017 IPR010749 Protein of unknown function DUF1323 RG43_RS09070 7456c9822d0da0da2bb0da9cdbe5e842 336 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 325 6.3E-49 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RG43_RS01520 1d092fc1ac21be5851994240ec8973c4 349 Pfam PF01594 Domain of unknown function DUF20 14 328 2.9E-82 T 09-03-2017 IPR002549 Transmembrane protein TqsA-like RG43_RS10770 bfcae75ac05daf0b2666be01fd0a25d2 164 Pfam PF01797 Transposase IS200 like 15 109 3.6E-28 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RG43_RS10770 bfcae75ac05daf0b2666be01fd0a25d2 164 Gene3D G3DSA:3.30.70.1290 16 109 1.0E-30 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RG43_RS10770 bfcae75ac05daf0b2666be01fd0a25d2 164 SMART SM01321 13 114 1.6E-17 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RG43_RS10770 bfcae75ac05daf0b2666be01fd0a25d2 164 SUPERFAMILY SSF143422 16 109 1.96E-28 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RG43_RS20950 2fd09991e965f5576fc2d6a35eef7eba 585 Pfam PF11737 Protein of unknown function (DUF3300) 75 346 5.8E-81 T 09-03-2017 IPR021728 Protein of unknown function DUF3300 RG43_RS03295 6411c997c6374d0b5809a22358cbf04d 259 Pfam PF03609 PTS system sorbose-specific iic component 5 236 4.9E-72 T 09-03-2017 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 RG43_RS27950 2f2a40a5c4c2b6d02f0a0fd6476edabe 63 Pfam PF13286 Phosphohydrolase-associated domain 25 62 4.6E-5 T 09-03-2017 IPR026875 Phosphohydrolase-associated domain RG43_RS07260 990de095326f6804dc3e485f0f4ce174 179 ProDom PD095266 MEMBRANE YFGI EXPORTED 1 179 3.0E-80 T 09-03-2017 IPR020231 Uncharacterised protein family, YfgI RG43_RS25770 ee3828c3f3fdb5b7492172a2a4204a91 165 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 165 3.0E-94 T 09-03-2017 RG43_RS18685 e6fef89c48d9d527359a5cc24dfd5979 124 Pfam PF10757 Biofilm formation regulator YbaJ 1 117 1.9E-61 T 09-03-2017 IPR019693 Biofilm formation regulator YbaJ RG43_RS19995 62676f41d2690a0d15bcf75ea9da932a 116 ProDom PD031037 EXCISIONASE DNA-BINDING DNA XIS RECOMBINATION SHIGELLA P40 X PROBABLE GP35 1 112 6.0E-61 T 09-03-2017 RG43_RS19995 62676f41d2690a0d15bcf75ea9da932a 116 Pfam PF12728 Helix-turn-helix domain 6 35 8.6E-8 T 09-03-2017 RG43_RS20395 e6684ed322e76e1411ad222ad41d7d88 148 Pfam PF13708 Domain of unknown function (DUF4942) 88 148 5.8E-13 T 09-03-2017 IPR031339 Domain of unknown function DUF4942 RG43_RS16955 598b5ccf0e3009be904a1cdd7f80f094 153 Pfam PF03245 Bacteriophage Rz lysis protein 30 153 5.7E-50 T 09-03-2017 IPR004929 Bacteriophage Rz lysis protein GO:0019076|GO:0019835 RG43_RS21980 7cbd5b2fcab772bec69158cce8668da0 153 Pfam PF07670 Nucleoside recognition 27 90 6.6E-9 T 09-03-2017 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 RG43_RS01955 81298dfd7a1c03db07a0fa45d9e9510b 574 Pfam PF13687 Domain of unknown function (DUF4153) 150 389 1.7E-44 T 09-03-2017 IPR025291 Protein of unknown function DUF4153 RG43_RS01335 08e02e04fc296a6199ee53278a340e3e 342 Gene3D G3DSA:3.40.1570.10 9 155 4.2E-9 T 09-03-2017 RG43_RS01335 08e02e04fc296a6199ee53278a340e3e 342 Gene3D G3DSA:3.40.1570.10 188 338 1.4E-11 T 09-03-2017 RG43_RS01335 08e02e04fc296a6199ee53278a340e3e 342 SUPERFAMILY SSF144064 2 336 8.34E-131 T 09-03-2017 RG43_RS01335 08e02e04fc296a6199ee53278a340e3e 342 Pfam PF05171 Haemin-degrading HemS.ChuX domain 27 155 9.8E-41 T 09-03-2017 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 RG43_RS01335 08e02e04fc296a6199ee53278a340e3e 342 Pfam PF05171 Haemin-degrading HemS.ChuX domain 204 335 2.9E-41 T 09-03-2017 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 RG43_RS04880 6c7c372c18d2423f773484231fc8b6ce 235 Pfam PF04474 Protein of unknown function (DUF554) 3 227 1.5E-68 T 09-03-2017 IPR007563 Protein of unknown function DUF554 RG43_RS24220 f117d342582e6657d13842a410eb3708 39 Pfam PF06528 Phage P2 GpE 1 36 4.7E-23 T 09-03-2017 IPR009493 Burkholderia phage phiE202, Gp27 RG43_RS24260 694e1356cc068974f63d0d18823e67e4 302 PIRSF PIRSF020481 1 302 2.2E-130 T 09-03-2017 IPR014507 Baseplate assembly protein J, predicted RG43_RS24260 694e1356cc068974f63d0d18823e67e4 302 Pfam PF04865 Baseplate J-like protein 118 261 6.1E-25 T 09-03-2017 IPR006949 Baseplate protein J-like RG43_RS16710 f7fe5713fb75a57483b213ab82b3cd7f 318 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 21 295 5.9E-16 T 09-03-2017 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD RG43_RS24855 afabd0ffa46d1403e9ce8c9d87b93af6 475 Pfam PF02646 RmuC family 136 432 1.3E-107 T 09-03-2017 IPR003798 DNA recombination RmuC RG43_RS22610 1a57bb4e9510d192b7cfdbeb63f0fd04 232 Pfam PF04012 PspA/IM30 family 2 232 3.3E-57 T 09-03-2017 IPR007157 PspA/IM30 RG43_RS03220 c158c95b96b63777722fe061bd0c8527 346 Pfam PF03773 Predicted permease 56 161 4.0E-14 T 09-03-2017 IPR005524 Predicted permease DUF318 RG43_RS03220 c158c95b96b63777722fe061bd0c8527 346 Pfam PF03773 Predicted permease 73 340 1.0E-28 T 09-03-2017 IPR005524 Predicted permease DUF318 RG43_RS24160 2d0b7132078823aa49193912d70fce18 146 Pfam PF05656 Protein of unknown function (DUF805) 8 132 1.2E-21 T 09-03-2017 IPR008523 Protein of unknown function DUF805 GO:0016021 RG43_RS20325 d9502f39cca2fca997426eb99a3696fb 157 ProDom PD012854 PLASMID KLCA ANTIRESTRICTION YFJX YCIB ARDB STABLE YFEB Z1216 C0275 60 157 2.0E-54 T 09-03-2017 IPR004914 Antirestriction protein RG43_RS20325 d9502f39cca2fca997426eb99a3696fb 157 Pfam PF03230 Antirestriction protein 62 157 1.6E-36 T 09-03-2017 IPR004914 Antirestriction protein RG43_RS08285 21de7b9b907bf9e6ff10d3a1d275c4bc 506 Pfam PF03606 C4-dicarboxylate anaerobic carrier 15 501 6.9E-164 T 09-03-2017 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 RG43_RS09535 44e6c4215aea61e17ba2111cbe576c39 147 SMART SM00226 3 141 6.3E-68 T 09-03-2017 IPR023485 Phosphotyrosine protein phosphatase I superfamily RG43_RS09535 44e6c4215aea61e17ba2111cbe576c39 147 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 97 110 8.0E-30 T 09-03-2017 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RG43_RS09535 44e6c4215aea61e17ba2111cbe576c39 147 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 113 128 8.0E-30 T 09-03-2017 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RG43_RS09535 44e6c4215aea61e17ba2111cbe576c39 147 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 41 57 8.0E-30 T 09-03-2017 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RG43_RS09535 44e6c4215aea61e17ba2111cbe576c39 147 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 5 22 8.0E-30 T 09-03-2017 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RG43_RS09535 44e6c4215aea61e17ba2111cbe576c39 147 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 75 90 8.0E-30 T 09-03-2017 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RG43_RS09535 44e6c4215aea61e17ba2111cbe576c39 147 Gene3D G3DSA:3.40.50.270 2 145 2.0E-46 T 09-03-2017 RG43_RS09535 44e6c4215aea61e17ba2111cbe576c39 147 SUPERFAMILY SSF52788 1 142 2.75E-44 T 09-03-2017 IPR023485 Phosphotyrosine protein phosphatase I superfamily RG43_RS09535 44e6c4215aea61e17ba2111cbe576c39 147 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 139 2.9E-47 T 09-03-2017 IPR023485 Phosphotyrosine protein phosphatase I superfamily RG43_RS03650 3d42367889f1c1375f3900669c42e918 166 Gene3D G3DSA:1.10.10.60 117 154 2.9E-5 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS10720 062748c47be403f5c9f273c55d00066e 147 Pfam PF02050 Flagellar FliJ protein 19 141 7.3E-35 T 09-03-2017 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 RG43_RS10720 062748c47be403f5c9f273c55d00066e 147 PIRSF PIRSF019404 1 147 6.4E-52 T 09-03-2017 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 RG43_RS10720 062748c47be403f5c9f273c55d00066e 147 PRINTS PR01004 Flagellar FliJ protein signature 4 26 1.8E-82 T 09-03-2017 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 RG43_RS10720 062748c47be403f5c9f273c55d00066e 147 PRINTS PR01004 Flagellar FliJ protein signature 27 43 1.8E-82 T 09-03-2017 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 RG43_RS10720 062748c47be403f5c9f273c55d00066e 147 PRINTS PR01004 Flagellar FliJ protein signature 63 84 1.8E-82 T 09-03-2017 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 RG43_RS10720 062748c47be403f5c9f273c55d00066e 147 PRINTS PR01004 Flagellar FliJ protein signature 86 107 1.8E-82 T 09-03-2017 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 RG43_RS10720 062748c47be403f5c9f273c55d00066e 147 PRINTS PR01004 Flagellar FliJ protein signature 108 126 1.8E-82 T 09-03-2017 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 RG43_RS10720 062748c47be403f5c9f273c55d00066e 147 PRINTS PR01004 Flagellar FliJ protein signature 126 146 1.8E-82 T 09-03-2017 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 RG43_RS10720 062748c47be403f5c9f273c55d00066e 147 PRINTS PR01004 Flagellar FliJ protein signature 44 61 1.8E-82 T 09-03-2017 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 RG43_RS10720 062748c47be403f5c9f273c55d00066e 147 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 6 144 1.6E-31 T 09-03-2017 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 RG43_RS15700 8c1b585e7dbff1a7560d1b255f066a81 514 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 2.5E-177 T 09-03-2017 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 RG43_RS09180 39afb12f8e36ff9141ee3713e61b64bd 35 Hamap MF_01362 UPF0387 membrane protein YohO [yohO]. 1 35 19.177 T 09-03-2017 IPR020870 Uncharacterised protein family UPF0387, membrane GO:0005886 RG43_RS01440 14cfe6a3d3e68d767bd41c320f32a9b9 499 Pfam PF01384 Phosphate transporter family 30 488 1.4E-85 T 09-03-2017 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 RG43_RS14470 c5a3991e60c5eba7f651e273c26c28db 35 Pfam PF13940 Toxin Ldr, type I toxin-antitoxin system 1 35 1.9E-24 T 09-03-2017 IPR025253 Type I toxin-antitoxin system, toxin Ldr RG43_RS10240 bbb84646648b3ab1bfc960369defb6e5 67 Pfam PF13986 Domain of unknown function (DUF4224) 5 47 1.4E-17 T 09-03-2017 IPR025319 Domain of unknown function DUF4224 RG43_RS10310 217dec1d46945594e892478102c338f1 141 Pfam PF06163 Bacterial protein of unknown function (DUF977) 1 135 4.7E-31 T 09-03-2017 IPR010382 Protein of unknown function DUF977 RG43_RS14790 40548341c0c408acf56797f6ee1e89f2 88 ProDom PD865043 PLASMID SPA-ORF10 3'REGION CYTOPLASMIC ORF-10 SPAS STY1854 30 88 6.0E-5 T 09-03-2017 IPR024753 Regulatory protein AriR GO:0042710|GO:0071229 RG43_RS14790 40548341c0c408acf56797f6ee1e89f2 88 Pfam PF10798 Biofilm development protein YmgB/AriR 29 87 8.2E-24 T 09-03-2017 IPR024753 Regulatory protein AriR GO:0042710|GO:0071229 RG43_RS22605 78527ffc9bc28526ff66e94300adeb9c 219 Pfam PF10679 Protein of unknown function (DUF2491) 4 215 4.8E-69 T 09-03-2017 IPR019621 Protein of unknown function DUF2491 RG43_RS24305 cfe7687d5dd85c3d8480494c3151b7f8 165 SUPERFAMILY SSF53955 7 162 5.62E-46 T 09-03-2017 IPR023346 Lysozyme-like domain RG43_RS24305 cfe7687d5dd85c3d8480494c3151b7f8 165 Gene3D G3DSA:1.10.530.10 6 162 1.5E-55 T 09-03-2017 RG43_RS24305 cfe7687d5dd85c3d8480494c3151b7f8 165 Pfam PF00959 Phage lysozyme 34 152 5.9E-21 T 09-03-2017 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 RG43_RS24270 0e57da7a68558b2b686d8a8de2fd59ef 211 Pfam PF04717 Type VI secretion system, phage-baseplate injector 8 119 5.2E-48 T 09-03-2017 IPR006531 Gp5 N-terminal RG43_RS24270 0e57da7a68558b2b686d8a8de2fd59ef 211 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 10 210 1.2E-74 T 09-03-2017 IPR013046 Phage baseplate assembly protein V/Gp45 RG43_RS13620 3d60c9ff947c848cddfd4412cc682001 879 Pfam PF11739 Dicarboxylate transport 657 858 3.0E-63 T 09-03-2017 IPR021730 Dicarboxylate transport RG43_RS10425 ec39506e594696290e452d29f151602c 60 ProDom PD052744 YMFR MEMBRANE TRANSMEMBRANE INTEGRAL SB3 GP3 25 57 7.0E-12 T 09-03-2017 IPR020297 Protein of unknown function YmfR RG43_RS08410 5098aaba976e92eab27b0bd399fe4b33 167 SUPERFAMILY SSF111069 3 165 1.83E-55 T 09-03-2017 IPR015068 Protein of unknown function DUF1877 RG43_RS08410 5098aaba976e92eab27b0bd399fe4b33 167 Pfam PF08974 Domain of unknown function (DUF1877) 1 163 1.0E-33 T 09-03-2017 IPR015068 Protein of unknown function DUF1877 RG43_RS08410 5098aaba976e92eab27b0bd399fe4b33 167 Gene3D G3DSA:3.40.1760.10 1 166 6.0E-50 T 09-03-2017 IPR015068 Protein of unknown function DUF1877 RG43_RS10820 d7f01df98c3fc332d95ce3d6660da629 121 Gene3D G3DSA:1.20.58.380 8 93 3.7E-19 T 09-03-2017 RG43_RS10820 d7f01df98c3fc332d95ce3d6660da629 121 Hamap MF_01180 Flagellar protein FliT [fliT]. 1 119 25.36 T 09-03-2017 IPR008622 Flagellar protein FliT RG43_RS10820 d7f01df98c3fc332d95ce3d6660da629 121 Pfam PF05400 Flagellar protein FliT 21 106 1.5E-20 T 09-03-2017 IPR008622 Flagellar protein FliT RG43_RS15850 f939cdca0fd1d1ed4d214683c9e9a204 417 Pfam PF04403 Paraquat-inducible protein A 253 408 6.6E-54 T 09-03-2017 IPR007498 Paraquat-inducible protein A RG43_RS15850 f939cdca0fd1d1ed4d214683c9e9a204 417 Pfam PF04403 Paraquat-inducible protein A 49 200 2.4E-40 T 09-03-2017 IPR007498 Paraquat-inducible protein A RG43_RS15850 f939cdca0fd1d1ed4d214683c9e9a204 417 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 1 408 6.3E-200 T 09-03-2017 IPR005219 Conserved hypothetical protein CHP00155 RG43_RS09845 248235a66c5342a26344114c212f3159 37 Pfam PF06117 Enterobacterial protein of unknown function (DUF957) 8 37 1.1E-9 T 09-03-2017 IPR009301 Protein of unknown function DUF957 RG43_RS26055 5d4bf12cd3205fea5a21b43612ba44ed 86 Pfam PF10723 Replication regulatory protein RepB 1 82 1.9E-43 T 09-03-2017 IPR019661 Replication regulatory protein RepA2 GO:0006276 RG43_RS09510 dc79b98f079627c48f6494f1acfb3004 617 Pfam PF05170 AsmA family 227 511 2.0E-23 T 09-03-2017 IPR007844 AsmA RG43_RS13350 44c44a5467f79cec3fcedaf5d8d4460c 77 Pfam PF10735 Protein of unknown function (DUF2526) 1 77 4.6E-44 T 09-03-2017 IPR019671 Protein of unknown function DUF2526 RG43_RS03660 ef62faf9852602311efb7e33a40dc5ed 146 Pfam PF11726 Protein of unknown function (DUF3296) 20 125 7.1E-11 T 09-03-2017 IPR021723 Inovirus Gp2 RG43_RS01990 66686dd15ee392fdf97026d5863edb10 259 SUPERFAMILY SSF53067 34 164 3.11E-5 T 09-03-2017 RG43_RS19025 ae02c563b136763abd4c3ee93cb648c5 303 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 2 302 44.177 T 09-03-2017 IPR007476 Putative exonuclease, RdgC GO:0006310 RG43_RS19025 ae02c563b136763abd4c3ee93cb648c5 303 Pfam PF04381 Putative exonuclease, RdgC 2 300 2.2E-128 T 09-03-2017 IPR007476 Putative exonuclease, RdgC GO:0006310 RG43_RS06250 0767ce54ee39b8e281fcbd854dae8cc2 153 Pfam PF11046 Transcriptional repressor of hyc and hyp operons 1 145 1.2E-75 T 09-03-2017 IPR021285 Transcription regulator, HycA RG43_RS24250 2a32f3442a589ddd0243a97dc41ee5b8 673 Pfam PF12571 Phage tail-collar fibre protein 1 151 3.8E-58 T 09-03-2017 IPR022225 Phage tail fibre protein RG43_RS24250 2a32f3442a589ddd0243a97dc41ee5b8 673 Pfam PF03406 Phage tail fibre repeat 170 209 2.0E-19 T 09-03-2017 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 RG43_RS03955 265d0972bd15046d7555cfda792abe62 257 Hamap MF_00548 Zinc transporter ZupT [zupT]. 1 252 30.594 T 09-03-2017 IPR023498 Zinc transporter ZupT RG43_RS03955 265d0972bd15046d7555cfda792abe62 257 Pfam PF02535 ZIP Zinc transporter 98 246 2.0E-25 T 09-03-2017 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 RG43_RS03955 265d0972bd15046d7555cfda792abe62 257 Pfam PF02535 ZIP Zinc transporter 6 91 1.1E-7 T 09-03-2017 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 RG43_RS26330 265d0972bd15046d7555cfda792abe62 257 Hamap MF_00548 Zinc transporter ZupT [zupT]. 1 252 30.594 T 09-03-2017 IPR023498 Zinc transporter ZupT RG43_RS26330 265d0972bd15046d7555cfda792abe62 257 Pfam PF02535 ZIP Zinc transporter 98 246 2.0E-25 T 09-03-2017 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 RG43_RS26330 265d0972bd15046d7555cfda792abe62 257 Pfam PF02535 ZIP Zinc transporter 6 91 1.1E-7 T 09-03-2017 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 RG43_RS05730 6b01d6265e81394c3c801ace029e51d3 221 Pfam PF09850 Type VI secretion system protein DotU 9 207 1.3E-47 T 09-03-2017 IPR017732 Type IV / VI secretion system, DotU RG43_RS05730 6b01d6265e81394c3c801ace029e51d3 221 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 9 211 2.7E-52 T 09-03-2017 IPR017732 Type IV / VI secretion system, DotU RG43_RS20180 83949086fabd373254ed6088390f6f38 68 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 12 59 1.2E-8 T 09-03-2017 IPR010260 Prophage CP4-57 regulatory protein (AlpA) RG43_RS14705 89fe48366f9f84b980f141fb360104b8 122 Pfam PF05666 Fels-1 Prophage Protein-like 22 61 1.0E-14 T 09-03-2017 IPR008617 Uncharacterised protein family, YcgJ RG43_RS14705 89fe48366f9f84b980f141fb360104b8 122 Pfam PF05666 Fels-1 Prophage Protein-like 69 120 4.3E-19 T 09-03-2017 IPR008617 Uncharacterised protein family, YcgJ RG43_RS00340 acd5e445911dce147501a10153a6e5c1 115 Pfam PF05717 IS66 Orf2 like protein 9 106 2.0E-38 T 09-03-2017 IPR008878 Transposase IS66, Orf2 RG43_RS16485 a9b16e798280e9370842bfdb8d3a8758 321 SUPERFAMILY SSF56235 4 309 2.34E-100 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal RG43_RS16485 a9b16e798280e9370842bfdb8d3a8758 321 Pfam PF01112 Asparaginase 5 311 1.8E-120 T 09-03-2017 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 RG43_RS19115 09e8ee3b53d4f7333333ac615f6ab4e8 364 ProDom PD041438 LIPOPROTEIN YAIW PRECURSOR SIGNAL MEMBRANE OUTER LIPOPROTEIN ECS0428 XAC0592 SECRETED 20 364 0.0 T 09-03-2017 IPR011673 Protein of unknown function DUF1615 RG43_RS19115 09e8ee3b53d4f7333333ac615f6ab4e8 364 Pfam PF07759 Protein of unknown function (DUF1615) 50 363 1.2E-148 T 09-03-2017 IPR011673 Protein of unknown function DUF1615 RG43_RS09340 5c5f350c62b8b7d258ae85db0a4af9f5 334 Pfam PF03747 ADP-ribosylglycohydrolase 8 302 4.0E-62 T 09-03-2017 IPR005502 ADP-ribosylation/Crystallin J1 RG43_RS09340 5c5f350c62b8b7d258ae85db0a4af9f5 334 SUPERFAMILY SSF101478 3 326 3.4E-69 T 09-03-2017 IPR005502 ADP-ribosylation/Crystallin J1 RG43_RS12695 3a4f4bac40f8ebeea68b56c6ff1540ea 111 Hamap MF_00546 Acid shock protein [asr]. 10 111 16.699 T 09-03-2017 IPR023497 Acid shock protein RG43_RS11750 66936c1a5427e6e820dcfd812044cc22 284 SUPERFAMILY SSF51430 4 273 2.49E-79 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain RG43_RS11750 66936c1a5427e6e820dcfd812044cc22 284 Gene3D G3DSA:3.20.20.100 11 275 3.9E-80 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain RG43_RS11750 66936c1a5427e6e820dcfd812044cc22 284 PRINTS PR00069 Aldo-keto reductase signature 127 144 3.1E-19 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RG43_RS11750 66936c1a5427e6e820dcfd812044cc22 284 PRINTS PR00069 Aldo-keto reductase signature 206 230 3.1E-19 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RG43_RS11750 66936c1a5427e6e820dcfd812044cc22 284 PRINTS PR00069 Aldo-keto reductase signature 97 115 3.1E-19 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RG43_RS11750 66936c1a5427e6e820dcfd812044cc22 284 PRINTS PR00069 Aldo-keto reductase signature 41 65 3.1E-19 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RG43_RS11750 66936c1a5427e6e820dcfd812044cc22 284 Pfam PF00248 Aldo/keto reductase family 17 271 3.4E-57 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain RG43_RS21170 b0d7e14348bbe9ca5277cc67cff46ff4 28 Pfam PF08054 Leucine operon leader peptide 1 28 2.5E-19 T 09-03-2017 IPR012570 Leucine operon leader peptide GO:0009098 RG43_RS17025 398550cb14c8de1ab050d435b137a387 233 Pfam PF06992 Replication protein P 1 233 3.7E-167 T 09-03-2017 IPR009731 Replication P GO:0006270 RG43_RS10775 afc5dd6cfc1c95db95f509c9ad052fe7 132 Pfam PF13586 Transposase DDE domain 44 121 1.7E-12 T 09-03-2017 IPR025668 Transposase DDE domain RG43_RS23565 ab20af98c43bf5eaf536fa3df4f523d4 265 Pfam PF03609 PTS system sorbose-specific iic component 6 237 2.6E-72 T 09-03-2017 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 RG43_RS23565 ab20af98c43bf5eaf536fa3df4f523d4 265 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 1 264 1.7E-127 T 09-03-2017 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 RG43_RS17005 15f3aa5c554775ac32d2e984d8f07047 58 Pfam PF05322 NINE Protein 1 58 2.4E-42 T 09-03-2017 IPR007986 NINE RG43_RS11770 f4f78f4b4b91d67983aa0b18a64cfec7 90 Pfam PF07023 Protein of unknown function (DUF1315) 5 80 1.5E-28 T 09-03-2017 IPR009749 Protein of unknown function DUF1315 RG43_RS17095 243df17ff82c17c3ad387c2ca16eb930 63 Pfam PF07131 Protein of unknown function (DUF1382) 1 61 6.5E-45 T 09-03-2017 IPR009814 Bacteriophage lambda, Xis (Q38267) RG43_RS15405 efffd999f29ce25db524dbba1d98affa 173 Pfam PF06496 Protein of unknown function (DUF1097) 18 152 2.0E-38 T 09-03-2017 IPR009476 Protein of unknown function DUF1097 RG43_RS16695 d0c938714fedc9b781bf354ec1a5aaf0 136 Pfam PF11076 Putative inner membrane protein YbhQ 1 132 8.4E-71 T 09-03-2017 IPR021303 Uncharacterised protein family, inner membrane, YbhQ RG43_RS24745 cb153f03fc94907bc8ace9e2e8005902 175 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 10 169 1.6E-49 T 09-03-2017 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 RG43_RS24745 cb153f03fc94907bc8ace9e2e8005902 175 SUPERFAMILY SSF52540 7 171 4.51E-22 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS24745 cb153f03fc94907bc8ace9e2e8005902 175 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 10 144 1.3E-49 T 09-03-2017 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 RG43_RS24745 cb153f03fc94907bc8ace9e2e8005902 175 Gene3D G3DSA:3.40.50.300 5 171 4.1E-60 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase RG43_RS12215 2f2c138c0bb7344ad6e38bb13699e520 89 Pfam PF15930 Domain of unknown function 28 89 9.7E-42 T 09-03-2017 IPR031830 Uncharacterised protein YdiH RG43_RS09045 a34c1bd781152d093b4e41acf9836c3b 385 Pfam PF04235 Protein of unknown function (DUF418) 215 374 7.6E-47 T 09-03-2017 IPR007349 Domain of unknown function DUF418 RG43_RS14610 7d18a142a59e75345bbfddeea4087cc6 84 Pfam PF04226 Transglycosylase associated protein 34 83 1.2E-13 T 09-03-2017 IPR007341 Transglycosylase-associated protein GO:0016021 RG43_RS17555 e43144bff688c574c81307e4947860c5 60 Pfam PF00872 Transposase, Mutator family 2 55 2.5E-12 T 09-03-2017 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 RG43_RS17250 9910cd9632802b3d8aef7fbbd4aaf080 126 Pfam PF13985 YbgS-like protein 3 126 5.3E-55 T 09-03-2017 IPR020363 Uncharacterised protein family YbgS RG43_RS17250 9910cd9632802b3d8aef7fbbd4aaf080 126 ProDom PD079292 YBGS HOMEOBOX PRECURSOR SIGNAL PROBABLE SECRETED 50 126 3.0E-39 T 09-03-2017 IPR020363 Uncharacterised protein family YbgS RG43_RS05805 3dca18030d360a2d65805a168ed98b5d 131 Pfam PF04241 Protein of unknown function (DUF423) 20 106 1.7E-23 T 09-03-2017 IPR006696 Protein of unknown function DUF423 RG43_RS01080 424e1287d47c29ed487323ed80ce1878 423 Pfam PF03222 Tryptophan/tyrosine permease family 21 404 8.9E-5 T 09-03-2017 IPR018227 Tryptophan/tyrosine permease GO:0003333 RG43_RS23280 f0ca57b7d8601f2a5ccdf27978c77e4d 104 Pfam PF04341 Protein of unknown function, DUF485 11 98 8.0E-33 T 09-03-2017 IPR007436 Protein of unknown function DUF485 RG43_RS12425 28d561c27a46a6d2fdc095e085a28688 670 Pfam PF04632 Fusaric acid resistance protein family 20 662 1.0E-174 T 09-03-2017 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 RG43_RS19215 c07b18232c8e6c935ff20d644fcd9587 35 Pfam PF12035 Protein of unknown function (DUF3521) 1 31 9.0E-7 T 09-03-2017 IPR021909 Protein of unknown function DUF3521 RG43_RS04645 e182011bca95f2001741ab1b3f6cf6a6 54 Pfam PF12759 InsA C-terminal domain 6 51 2.4E-31 T 09-03-2017 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain RG43_RS04645 e182011bca95f2001741ab1b3f6cf6a6 54 Gene3D G3DSA:1.10.10.60 16 49 4.2E-4 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 RG43_RS20725 dcc549b9de1c051404f55b1a0d9c386f 207 Pfam PF03458 UPF0126 domain 92 163 6.3E-20 T 09-03-2017 IPR005115 Uncharacterised domain UPF0126 RG43_RS20725 dcc549b9de1c051404f55b1a0d9c386f 207 Pfam PF03458 UPF0126 domain 4 78 3.6E-23 T 09-03-2017 IPR005115 Uncharacterised domain UPF0126 RG43_RS03530 f2bd59d50d76942d4712587c088e92af 167 Pfam PF01863 Protein of unknown function DUF45 93 149 3.0E-11 T 09-03-2017 IPR002725 Protein of unknown function DUF45 RG43_RS10810 64ce94611ad24a457523dab461191fcb 137 Pfam PF13987 YedD-like protein 25 129 1.2E-54 T 09-03-2017 IPR025596 YedD-like protein RG43_RS13890 8adf1a496e183389d98c27b95a4647b1 426 Pfam PF01266 FAD dependent oxidoreductase 29 381 2.1E-54 T 09-03-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RG43_RS13890 8adf1a496e183389d98c27b95a4647b1 426 Gene3D G3DSA:3.50.50.60 171 252 1.8E-49 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS13890 8adf1a496e183389d98c27b95a4647b1 426 Gene3D G3DSA:3.50.50.60 17 118 1.8E-49 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS13890 8adf1a496e183389d98c27b95a4647b1 426 Gene3D G3DSA:3.50.50.60 344 399 1.8E-49 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS13890 8adf1a496e183389d98c27b95a4647b1 426 SUPERFAMILY SSF51905 28 252 5.18E-45 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS13890 8adf1a496e183389d98c27b95a4647b1 426 SUPERFAMILY SSF51905 354 411 5.18E-45 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RG43_RS18225 c4af6b2f628f68b91edece08f2f35a29 415 Gene3D G3DSA:2.30.30.60 203 252 9.1E-9 T 09-03-2017 RG43_RS18225 c4af6b2f628f68b91edece08f2f35a29 415 Gene3D G3DSA:3.30.70.100 323 389 8.9E-4 T 09-03-2017 RG43_RS18225 c4af6b2f628f68b91edece08f2f35a29 415 SUPERFAMILY SSF82689 317 395 1.19E-6 T 09-03-2017 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 RG43_RS18225 c4af6b2f628f68b91edece08f2f35a29 415 Pfam PF00924 Mechanosensitive ion channel 142 396 8.1E-72 T 09-03-2017 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 RG43_RS18225 c4af6b2f628f68b91edece08f2f35a29 415 SUPERFAMILY SSF50182 187 253 4.58E-12 T 09-03-2017 IPR010920 LSM domain RG43_RS01450 40422de8ceaa374188fdb40daaadf0c9 350 Pfam PF10951 Protein of unknown function (DUF2776) 1 347 1.5E-150 T 09-03-2017 IPR021240 Protein of unknown function DUF2776 RG43_RS25075 a2979f9a6c1970fcd1c8d3271f8d904f 67 Pfam PF13627 Prokaryotic lipoprotein-attachment site 8 29 6.1E-9 T 09-03-2017 IPR032831 Prokaryotic lipoprotein-attachment site RG43_RS15390 81e30ecf38cdb07c6e8dcfc6d04c85a1 129 Pfam PF10627 Curli assembly protein CsgE 28 128 4.1E-33 T 09-03-2017 IPR018900 Curli assembly protein CsgE RG43_RS14440 8f0d8fde31349013f05d665d8254fa83 476 Pfam PF11924 Invasin beta-domain of outer membrane 76 353 3.9E-99 T 09-03-2017 IPR024519 Invasin beta-domain of outer membrane RG43_RS08990 da2e466be8984807c53c5e388db38fd9 416 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 2.6E-21 T 09-03-2017 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 RG43_RS08990 da2e466be8984807c53c5e388db38fd9 416 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 412 3.1E-150 T 09-03-2017 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 RG43_RS08990 da2e466be8984807c53c5e388db38fd9 416 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 201 412 5.5E-66 T 09-03-2017 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 RG43_RS27580 b3e50519aea8a6080f9c223d327df335 317 Pfam PF00860 Permease family 36 317 1.5E-68 T 09-03-2017 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RG43_RS25310 e9f588040b00f0a765a09edb29d4dc3c 112 Pfam PF04219 Protein of unknown function, DUF 10 98 2.7E-39 T 09-03-2017 IPR007335 Protein of unknown function DUF413 RG43_RS21780 974cd2eb74f9a1baba0931d9b9b0890d 256 Pfam PF06738 Putative threonine/serine exporter 11 250 1.6E-69 T 09-03-2017 IPR010619 Putative threonine/serine exporter RG43_RS09725 0536cf9db765ee8110266c7a3cfff288 30 Gene3D G3DSA:3.40.50.720 1 30 1.4E-10 T 09-03-2017 IPR016040 NAD(P)-binding domain RG43_RS14085 00ed2acece391bc2d4fba1e81e860271 83 Pfam PF10692 Protein of unknown function (DUF2498) 4 81 1.2E-42 T 09-03-2017 IPR019633 Protein of unknown function DUF2498 RG43_RS03475 c73ca6950ef645f2f22a23b5c138d8f4 220 Pfam PF09335 SNARE associated Golgi protein 48 173 7.8E-22 T 09-03-2017 IPR032816 SNARE associated Golgi protein RG43_RS17080 7d679dc12d97126b665ce2f25006eae8 261 TIGRFAM TIGR01913 bet_lambda: phage recombination protein Bet 12 176 2.3E-50 T 09-03-2017 IPR010183 Bacteriophage lambda, Bet RG43_RS17080 7d679dc12d97126b665ce2f25006eae8 261 Pfam PF03837 RecT family 24 99 1.5E-14 T 09-03-2017 IPR018330 RecT family GO:0003677|GO:0006259 RG43_RS17080 7d679dc12d97126b665ce2f25006eae8 261 Pfam PF03837 RecT family 104 182 3.3E-12 T 09-03-2017 IPR018330 RecT family GO:0003677|GO:0006259 RG43_RS13710 e83cb95fbc7330e17d5a0cd5333b1ed1 53 Pfam PF03806 AbgT putative transporter family 7 50 2.9E-14 T 09-03-2017 IPR004697 p-aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 RG43_RS10480 9864c7d7ee110061cb43580e5fee6401 92 Pfam PF13227 Protein of unknown function (DUF4035) 28 74 4.3E-18 T 09-03-2017 IPR025116 Protein of unknown function DUF4035 RG43_RS01605 4a45df600489f28e16ee088fcfe0e9dc 45 Pfam PF15945 Domain of unknown function (DUF4753) 1 45 1.9E-18 T 09-03-2017 IPR031859 Protein of unknown function DUF4753 RG43_RS24325 c00f55e7a0405a169fd0fdfb5af26816 77 Pfam PF05489 Phage Tail Protein X 1 60 1.4E-31 T 09-03-2017 IPR008861 Phage Tail Protein X-like RG43_RS22325 36d8fedeee45aafe53ee14130e2978d3 340 Pfam PF02653 Branched-chain amino acid transport system / permease component 56 320 5.7E-48 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RG43_RS16065 07a1a007e5fa06e9ce3e8be22872c2f1 586 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 59 391 4.5E-81 T 09-03-2017 IPR003776 YcaO-like domain RG43_RS16065 07a1a007e5fa06e9ce3e8be22872c2f1 586 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 11 404 1.2E-172 T 09-03-2017 IPR003776 YcaO-like domain RG43_RS18400 ded0abb9fb499c4b39edcc9628fc6e39 433 Pfam PF00860 Permease family 9 394 6.9E-97 T 09-03-2017 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RG43_RS08620 bfc21d3b7d6ccb4cd9bc4e26592fd20a 562 Pfam PF09909 Uncharacterized protein conserved in bacteria (DUF2138) 16 559 1.2E-241 T 09-03-2017 IPR018671 Protein of unknown function DUF2138 RG43_RS10755 c8bc6b641823caf4d8ff34124d6579be 110 Pfam PF00893 Small Multidrug Resistance protein 4 94 3.3E-34 T 09-03-2017 IPR000390 Small multidrug resistance protein family GO:0016021 RG43_RS10755 c8bc6b641823caf4d8ff34124d6579be 110 SUPERFAMILY SSF103481 6 106 2.88E-23 T 09-03-2017 RG43_RS22925 3e6c22a6a8b6ccfbee0423bca0cd3243 98 Pfam PF11080 Protein of unknown function (DUF2622) 5 94 1.1E-30 T 09-03-2017 IPR022597 Endoribonuclease GhoS GO:0004521 RG43_RS00455 97f2a51559ce33fd7a14f684df50d0ac 569 Pfam PF05170 AsmA family 1 523 2.7E-25 T 09-03-2017 IPR007844 AsmA RG43_RS19120 2237327f17d1c428c0a9bc3e324ac277 406 SUPERFAMILY SSF90123 78 389 1.86E-6 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RG43_RS19120 2237327f17d1c428c0a9bc3e324ac277 406 Pfam PF05992 SbmA/BacA-like family 80 393 1.9E-166 T 09-03-2017 IPR009248 SbmA/BacA-like GO:0005215|GO:0006810|GO:0016021 RG43_RS00805 9317402f4016083643434dabf771f0b1 246 Pfam PF06629 MltA-interacting protein MipA 26 246 1.6E-50 T 09-03-2017 IPR010583 MltA-interacting MipA RG43_RS10380 3159226a8a8f8f21f611fc4ab0103641 104 Pfam PF07041 Protein of unknown function (DUF1327) 1 86 8.2E-43 T 09-03-2017 IPR009759 Bacteriophage ES18, Gp24 RG43_RS04940 09551f8249847138c97ff4d8d6485924 335 Pfam PF06717 Protein of unknown function (DUF1202) 14 320 3.4E-194 T 09-03-2017 IPR009592 Protein of unknown function DUF1202 RG43_RS10490 fb284daaf2ca9c5444e10b3aeb33b564 118 Pfam PF05939 Phage minor tail protein 10 116 6.1E-31 T 09-03-2017 IPR010265 Bacteriophage lambda, GpM, minor tail RG43_RS22600 1088b8abad97e998311c7afa390a144c 132 Pfam PF03994 Domain of Unknown Function (DUF350) 78 130 4.1E-7 T 09-03-2017 IPR007140 Protein of unknown function DUF350 RG43_RS22600 1088b8abad97e998311c7afa390a144c 132 Pfam PF03994 Domain of Unknown Function (DUF350) 13 65 2.2E-12 T 09-03-2017 IPR007140 Protein of unknown function DUF350 RG43_RS09465 efda09d57f23a8060f054faea176517c 19 Pfam PF13956 Toxin Ibs, type I toxin-antitoxin system 1 19 1.1E-13 T 09-03-2017 IPR025881 Toxin Ibs RG43_RS24235 a4b11bdc50d031bd4dbcc85491cd632a 396 Pfam PF04984 Phage tail sheath protein 101 382 1.5E-59 T 09-03-2017 IPR007067 Tail sheath protein RG43_RS24235 a4b11bdc50d031bd4dbcc85491cd632a 396 Pfam PF04984 Phage tail sheath protein 1 91 1.5E-16 T 09-03-2017 IPR007067 Tail sheath protein RG43_RS10045 e9d125e239797c7f248b0a40fbf7603e 38 Pfam PF13817 IS66 C-terminal element 14 37 1.2E-8 T 09-03-2017 RG43_RS20025 36adfa68e34fe2516bb36f384caced15 133 Pfam PF07417 Transcriptional regulator Crl 5 122 3.1E-54 T 09-03-2017 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 RG43_RS20025 36adfa68e34fe2516bb36f384caced15 133 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 1 128 32.538 T 09-03-2017 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 RG43_RS22320 06f674cfb4ac2faeedfbfead004b2406 331 Pfam PF02653 Branched-chain amino acid transport system / permease component 35 304 1.7E-43 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RG43_RS15440 61bb37c958ab70d621cd2012436a2276 151 Pfam PF10881 Protein of unknown function (DUF2726) 14 129 3.4E-20 T 09-03-2017 IPR024402 Domain of unknown function DUF2726 RG43_RS24015 952598325d746c8cce422b9fceb08b6e 39 Pfam PF15954 Domain of unknown function (DUF4759) 5 38 5.6E-18 T 09-03-2017 IPR031873 Domain of unknown function DUF4759 RG43_RS03450 15f371108bcdca87cc8550d24f6c95d6 99 Pfam PF13997 YqjK-like protein 14 86 2.5E-27 T 09-03-2017 IPR025612 YqjK-like protein RG43_RS18825 2392f87dc99df6eb16be9adf8acd782b 226 Pfam PF08139 Prokaryotic membrane lipoprotein lipid attachment site 2 54 3.0E-17 T 09-03-2017 IPR012640 Membrane lipoprotein, lipid attachment site RG43_RS18825 2392f87dc99df6eb16be9adf8acd782b 226 Pfam PF03923 Uncharacterized lipoprotein 63 222 4.8E-53 T 09-03-2017 IPR005619 Uncharacterised protein family, YajG RG43_RS08110 81b43423b56a4f4a0b32e6b3974cb787 280 Pfam PF11245 Protein of unknown function (DUF2544) 57 280 2.9E-76 T 09-03-2017 IPR021407 Protein of unknown function DUF2544 RG43_RS01615 db7b9d09fdb7b40ad4666c0829fa4bbb 308 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 292 7.9E-71 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RG43_RS08170 71533693b213a1077f644955ed13661b 331 PIRSF PIRSF020588 2 331 1.6E-153 T 09-03-2017 IPR023597 Flagellar regulator Flk GO:0010468|GO:0031224 RG43_RS07810 bf4fbd9e5451a8d1eecf31d6fd5d5c16 415 Pfam PF02378 Phosphotransferase system, EIIC 41 343 3.7E-10 T 09-03-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 RG43_RS07630 adf53df81732d464731ff0621cfbc1c6 122 ProDom PD031420 YFEK EXPORTED PRECURSOR SIGNAL PERIPLASMIC ECS3291 XCC0326 1 107 9.0E-58 T 09-03-2017 RG43_RS10635 d2701625661e9ab22487ce301bc6f4de 60 Pfam PF09926 Uncharacterized small protein (DUF2158) 9 47 1.3E-7 T 09-03-2017 IPR019226 Protein of unknown function DUF2158 RG43_RS07710 b8bdea31c2cf66019b18d6f8739081a3 52 TIGRFAM TIGR03510 XapX: XapX domain 4 50 1.5E-18 T 09-03-2017 IPR020017 XapX domain RG43_RS11505 9030c1c05bccbd63c9ee00333b30276d 47 Pfam PF10736 Protein of unknown function (DUF2627) 1 38 1.3E-30 T 09-03-2017 IPR019672 Protein of unknown function DUF2627 RG43_RS13410 6855e46c2486d22cdc69a9e3a93bdbbc 76 ProDom PD057831 YNCJ PRECURSOR SIGNAL PERIPLASMIC STY1461 1 76 2.0E-38 T 09-03-2017 IPR020117 Uncharacterised protein family YncJ RG43_RS13410 6855e46c2486d22cdc69a9e3a93bdbbc 76 Pfam PF10829 Protein of unknown function (DUF2554) 1 76 1.5E-52 T 09-03-2017 IPR020117 Uncharacterised protein family YncJ RG43_RS22350 cd1a7592f86b726b4d586e739b960b43 1259 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 923 1259 1.6E-69 T 09-03-2017 IPR007452 Translocation and assembly module TamB RG43_RS19855 b498419ee3bbdd7f4b56cdc851a53ac8 700 Pfam PF05876 Phage terminase large subunit (GpA) 34 644 3.4E-176 T 09-03-2017 IPR008866 Bacteriophage lambda, GpA RG43_RS21800 60a413e388be4aefed88fbab18b7b352 165 Pfam PF10696 Protein of unknown function (DUF2501) 85 163 4.1E-27 T 09-03-2017 IPR019637 Protein of unknown function DUF2501 RG43_RS21515 959c8a5f2bb9ca1386aad4353648aa0d 98 Pfam PF10697 Protein of unknown function (DUF2502) 25 70 1.9E-15 T 09-03-2017 IPR019638 Protein of unknown function DUF2502 RG43_RS19220 bcbd4cdb0268ca8a2c022422865ad231 179 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 5 179 3.6E-60 T 09-03-2017 IPR018636 Protein of unknown function DUF2058 RG43_RS17020 0afb44994313401dacc8e7ce919dbd4b 96 Gene3D G3DSA:1.10.10.10 6 64 3.5E-4 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain RG43_RS24245 18847f53f468a2e43f64b9cd13ee09cc 175 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 40 175 9.5E-36 T 09-03-2017 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly RG43_RS23415 82819228d6f8f3c7fd25900fed312dd1 459 Pfam PF01554 MatE 35 196 9.5E-35 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 RG43_RS23415 82819228d6f8f3c7fd25900fed312dd1 459 Pfam PF01554 MatE 259 412 1.3E-10 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 RG43_RS23415 82819228d6f8f3c7fd25900fed312dd1 459 TIGRFAM TIGR00797 matE: MATE efflux family protein 35 428 2.7E-104 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 RG43_RS26950 2bcaf83f1226bb9e8ae971d13c1498ae 243 Pfam PF11726 Protein of unknown function (DUF3296) 15 233 1.2E-41 T 09-03-2017 IPR021723 Inovirus Gp2 RG43_RS19420 4c9e5332f235ee967bf5374a605b0701 287 Pfam PF11392 Protein of unknown function (DUF2877) 167 274 1.1E-26 T 09-03-2017 IPR021530 Protein of unknown function DUF2877 RG43_RS18455 43ef3794b91323d38e401f42ec034459 804 Pfam PF02687 FtsX-like permease family 247 364 1.5E-10 T 09-03-2017 IPR003838 ABC transporter permease protein domain GO:0016020 RG43_RS18455 43ef3794b91323d38e401f42ec034459 804 Pfam PF02687 FtsX-like permease family 683 791 5.0E-12 T 09-03-2017 IPR003838 ABC transporter permease protein domain GO:0016020 RG43_RS11090 867e01525784be0628d028025e66e39c 130 Pfam PF06366 Flagellar protein FlhE 28 130 4.6E-38 T 09-03-2017 IPR009420 Flagellar protein FlhE RG43_RS11000 eb37d8618923af2933a74afc7815f76c 170 Pfam PF03400 IS1 transposase 40 170 1.6E-78 T 09-03-2017 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 RG43_RS05860 fe42cfca8432ab930e60f20578f9fe21 429 TIGRFAM TIGR00814 stp: serine transporter 18 418 1.1E-186 T 09-03-2017 IPR004694 Hydroxy amino acid transporter GO:0005215|GO:0006810|GO:0016021 RG43_RS14950 ca74d23f224d6739fd7bf34d6fbf3f27 357 Pfam PF01757 Acyltransferase family 7 325 2.3E-22 T 09-03-2017 IPR002656 Acyltransferase 3 GO:0016747 RG43_RS21840 d87cd31d270a433de870a71ede847c7e 489 Pfam PF00474 Sodium:solute symporter family 34 419 1.1E-43 T 09-03-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RG43_RS25800 22907842064db6456ba1905c883dbdc9 32 Pfam PF08049 IlvB leader peptide 1 32 1.4E-18 T 09-03-2017 IPR012566 IlvB leader peptide RG43_RS21940 f69fb5df1386af93e0f2e3d159e2c1bd 426 Pfam PF04286 Protein of unknown function (DUF445) 44 417 1.2E-107 T 09-03-2017 IPR007383 Protein of unknown function DUF445 RG43_RS17355 24e689b003b14408a49a151692cf629c 522 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 3.0E-173 T 09-03-2017 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 RG43_RS07265 c12b5ef0c6dd1862a1773a26d182306a 172 Pfam PF05433 Glycine zipper 2TM domain 73 114 7.3E-8 T 09-03-2017 IPR008816 Glycine zipper 2TM domain GO:0019867 RG43_RS17120 6ef62f93069e66d78665347c6fea8dc4 232 Pfam PF07007 Protein of unknown function (DUF1311) 23 77 2.2E-5 T 09-03-2017 IPR009739 Protein of unknown function DUF1311 RG43_RS15255 6f259138602043a6e267b4c0031e2b2e 186 Pfam PF07273 Protein of unknown function (DUF1439) 27 178 1.1E-55 T 09-03-2017 IPR010835 Protein of unknown function DUF1439 RG43_RS00500 65fb447cec3050795b513dd9a2f962e2 205 Pfam PF03458 UPF0126 domain 91 164 7.2E-22 T 09-03-2017 IPR005115 Uncharacterised domain UPF0126 RG43_RS00500 65fb447cec3050795b513dd9a2f962e2 205 Pfam PF03458 UPF0126 domain 5 79 1.5E-18 T 09-03-2017 IPR005115 Uncharacterised domain UPF0126 RG43_RS22105 b570c1f6492d5879a2f1942f878db713 216 Pfam PF01844 HNH endonuclease 141 197 1.5E-5 T 09-03-2017 IPR002711 HNH endonuclease GO:0003676|GO:0004519 RG43_RS25080 b0a36b3c86b56ecaee63746f0b800260 184 Pfam PF11745 Protein of unknown function (DUF3304) 62 145 4.5E-5 T 09-03-2017 IPR021733 Protein of unknown function DUF3304 RG43_RS06825 ec135da615ef9ffdb230e8bd56a69e33 195 Pfam PF01810 LysE type translocator 15 194 5.7E-14 T 09-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RG43_RS12435 e3384b3d27ef2cef6db9e0a4b0ac2877 78 Pfam PF07869 Protein of unknown function (DUF1656) 19 70 4.2E-14 T 09-03-2017 IPR012451 Protein of unknown function DUF1656