locus-tag class description RG42_RS00005 PF03205 Molybdopterin guanine dinucleotide synthesis protein B RG42_RS00010 PF12804 MobA-like NTP transferase domain RG42_RS00015 PF06288 Protein of unknown function (DUF1040) RG42_RS00020 PF01636 Phosphotransferase enzyme family RG42_RS00025 PF01323 DSBA-like thioredoxin domain RG42_RS00030 PF06097 Bacterial protein of unknown function (DUF945) RG42_RS00035 PF01553 Acyltransferase RG42_RS00045 PF01367 5'-3' exonuclease, C-terminal SAM fold RG42_RS00045 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RG42_RS00045 PF00476 DNA polymerase family A RG42_RS00045 PF01612 3'-5' exonuclease RG42_RS00050 PF01926 50S ribosome-binding GTPase RG42_RS00060 PF04220 Der GTPase activator (YihI) RG42_RS00065 PF04055 Radical SAM superfamily RG42_RS00065 PF06969 HemN C-terminal domain RG42_RS00075 PF02954 Bacterial regulatory protein, Fis family RG42_RS00075 PF00158 Sigma-54 interaction domain RG42_RS00075 PF00072 Response regulator receiver domain RG42_RS00080 PF00512 His Kinase A (phospho-acceptor) domain RG42_RS00080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG42_RS00080 PF00989 PAS fold RG42_RS00085 PF00120 Glutamine synthetase, catalytic domain RG42_RS00085 PF03951 Glutamine synthetase, beta-Grasp domain RG42_RS00095 PF00009 Elongation factor Tu GTP binding domain RG42_RS00095 PF00679 Elongation factor G C-terminus RG42_RS00095 PF03144 Elongation factor Tu domain 2 RG42_RS00100 PF00392 Bacterial regulatory proteins, gntR family RG42_RS00100 PF07702 UTRA domain RG42_RS00105 PF01261 Xylose isomerase-like TIM barrel RG42_RS00110 PF07690 Major Facilitator Superfamily RG42_RS00115 PF06178 Oligogalacturonate-specific porin protein (KdgM) RG42_RS00130 PF01055 Glycosyl hydrolases family 31 RG42_RS00135 PF01263 Aldose 1-epimerase RG42_RS00145 PF01791 DeoC/LacD family aldolase RG42_RS00150 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RG42_RS00150 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RG42_RS00155 PF00294 pfkB family carbohydrate kinase RG42_RS00160 PF00455 DeoR C terminal sensor domain RG42_RS00160 PF08220 DeoR-like helix-turn-helix domain RG42_RS00165 PF13419 Haloacid dehalogenase-like hydrolase RG42_RS00170 PF03631 Virulence factor BrkB RG42_RS00175 PF02580 D-Tyr-tRNA(Tyr) deacylase RG42_RS00180 PF00583 Acetyltransferase (GNAT) family RG42_RS00180 PF09500 Putative thioesterase (yiiD_Cterm) RG42_RS00185 PF01402 Ribbon-helix-helix protein, copG family RG42_RS00200 PF04216 Protein involved in formate dehydrogenase formation RG42_RS00205 PF01292 Prokaryotic cytochrome b561 RG42_RS00210 PF09163 Formate dehydrogenase N, transmembrane RG42_RS00210 PF13247 4Fe-4S dicluster domain RG42_RS00225 PF02634 FdhD/NarQ family RG42_RS00230 PF12889 Protein of unknown function (DUF3829) RG42_RS00235 PF08279 HTH domain RG42_RS00235 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RG42_RS00240 PF05343 M42 glutamyl aminopeptidase RG42_RS00245 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RG42_RS00245 PF02378 Phosphotransferase system, EIIC RG42_RS00250 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RG42_RS00255 PF05336 L-rhamnose mutarotase RG42_RS00260 PF00596 Class II Aldolase and Adducin N-terminal domain RG42_RS00265 PF06134 L-rhamnose isomerase (RhaA) RG42_RS00270 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RG42_RS00270 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RG42_RS00280 PF02311 AraC-like ligand binding domain RG42_RS00280 PF12833 Helix-turn-helix domain RG42_RS00285 PF12833 Helix-turn-helix domain RG42_RS00285 PF02311 AraC-like ligand binding domain RG42_RS00290 PF06379 L-rhamnose-proton symport protein (RhaT) RG42_RS00295 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RG42_RS00295 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RG42_RS00310 PF03812 2-keto-3-deoxygluconate permease RG42_RS00315 PF03473 MOSC domain RG42_RS00315 PF03475 3-alpha domain RG42_RS00320 PF16527 Two-component sensor protein CpxA, periplasmic domain RG42_RS00320 PF00672 HAMP domain RG42_RS00320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG42_RS00320 PF00512 His Kinase A (phospho-acceptor) domain RG42_RS00325 PF00072 Response regulator receiver domain RG42_RS00325 PF00486 Transcriptional regulatory protein, C terminal RG42_RS00330 PF07813 LTXXQ motif family protein RG42_RS00335 PF01545 Cation efflux family RG42_RS00335 PF16916 Dimerisation domain of Zinc Transporter RG42_RS00340 PF00365 Phosphofructokinase RG42_RS00350 PF02611 CDP-diacylglycerol pyrophosphatase RG42_RS00355 PF00121 Triosephosphate isomerase RG42_RS00365 PF07305 Protein of unknown function (DUF1454) RG42_RS00370 PF05656 Protein of unknown function (DUF805) RG42_RS00375 PF04175 Protein of unknown function (DUF406) RG42_RS00380 PF00582 Universal stress protein family RG42_RS00385 PF00175 Oxidoreductase NAD-binding domain RG42_RS00385 PF00970 Oxidoreductase FAD-binding domain RG42_RS00390 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded RG42_RS00395 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RG42_RS00395 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RG42_RS00400 PF00230 Major intrinsic protein RG42_RS00405 PF06005 Cell division protein ZapB RG42_RS00410 PF03737 Aldolase/RraA RG42_RS00415 PF01040 UbiA prenyltransferase family RG42_RS00420 PF10431 C-terminal, D2-small domain, of ClpB protein RG42_RS00420 PF00004 ATPase family associated with various cellular activities (AAA) RG42_RS00420 PF07724 AAA domain (Cdc48 subfamily) RG42_RS00425 PF00227 Proteasome subunit RG42_RS00430 PF05036 Sporulation related domain RG42_RS00435 PF00356 Bacterial regulatory proteins, lacI family RG42_RS00440 PF00271 Helicase conserved C-terminal domain RG42_RS00440 PF17764 3′ DNA-binding domain (3′BD) RG42_RS00440 PF18074 Primosomal protein N C-terminal domain RG42_RS00440 PF00270 DEAD/DEAH box helicase RG42_RS00440 PF18319 PriA DNA helicase Cys-rich region (CRR) domain RG42_RS00445 PF01197 Ribosomal protein L31 RG42_RS00450 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family RG42_RS00455 PF01340 Met Apo-repressor, MetJ RG42_RS00460 PF01053 Cys/Met metabolism PLP-dependent enzyme RG42_RS00465 PF00742 Homoserine dehydrogenase RG42_RS00465 PF03447 Homoserine dehydrogenase, NAD binding domain RG42_RS00465 PF00696 Amino acid kinase family RG42_RS00475 PF02219 Methylenetetrahydrofolate reductase RG42_RS00480 PF00141 Peroxidase RG42_RS00485 PF00892 EamA-like transporter family RG42_RS00490 PF06940 Domain of unknown function (DUF1287) RG42_RS00500 PF00465 Iron-containing alcohol dehydrogenase RG42_RS00505 PF00923 Transaldolase/Fructose-6-phosphate aldolase RG42_RS00510 PF00391 PEP-utilising enzyme, mobile domain RG42_RS00510 PF02896 PEP-utilising enzyme, TIM barrel domain RG42_RS00510 PF00381 PTS HPr component phosphorylation site RG42_RS00510 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RG42_RS00510 PF05524 PEP-utilising enzyme, N-terminal RG42_RS00520 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RG42_RS00525 PF01228 Glycine radical RG42_RS00525 PF02901 Pyruvate formate lyase-like RG42_RS00530 PF04055 Radical SAM superfamily RG42_RS00535 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RG42_RS00540 PF12833 Helix-turn-helix domain RG42_RS00550 PF00884 Sulfatase RG42_RS00555 PF00311 Phosphoenolpyruvate carboxylase RG42_RS00565 PF01546 Peptidase family M20/M25/M40 RG42_RS00565 PF07687 Peptidase dimerisation domain RG42_RS00570 PF02774 Semialdehyde dehydrogenase, dimerisation domain RG42_RS00570 PF01118 Semialdehyde dehydrogenase, NAD binding domain RG42_RS00575 PF00696 Amino acid kinase family RG42_RS00580 PF00206 Lyase RG42_RS00580 PF14698 Argininosuccinate lyase C-terminal RG42_RS00585 PF03466 LysR substrate binding domain RG42_RS00585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG42_RS00590 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG42_RS00590 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RG42_RS00600 PF00440 Bacterial regulatory proteins, tetR family RG42_RS00605 PF07226 Protein of unknown function (DUF1422) RG42_RS00610 PF05958 tRNA (Uracil-5-)-methyltransferase RG42_RS00615 PF07715 TonB-dependent Receptor Plug Domain RG42_RS00615 PF00593 TonB dependent receptor RG42_RS00620 PF01177 Asp/Glu/Hydantoin racemase RG42_RS00650 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain RG42_RS00650 PF01565 FAD binding domain RG42_RS00655 PF08279 HTH domain RG42_RS00655 PF03099 Biotin/lipoate A/B protein ligase family RG42_RS00655 PF02237 Biotin protein ligase C terminal domain RG42_RS00660 PF00485 Phosphoribulokinase / Uridine kinase family RG42_RS00695 PF03144 Elongation factor Tu domain 2 RG42_RS00695 PF00009 Elongation factor Tu GTP binding domain RG42_RS00695 PF03143 Elongation factor Tu C-terminal domain RG42_RS00700 PF00584 SecE/Sec61-gamma subunits of protein translocation complex RG42_RS00705 PF00467 KOW motif RG42_RS00705 PF02357 Transcription termination factor nusG RG42_RS00710 PF03946 Ribosomal protein L11, N-terminal domain RG42_RS00710 PF00298 Ribosomal protein L11, RNA binding domain RG42_RS00715 PF00687 Ribosomal protein L1p/L10e family RG42_RS00725 PF00466 Ribosomal protein L10 RG42_RS00730 PF16320 Ribosomal protein L7/L12 dimerisation domain RG42_RS00730 PF00542 Ribosomal protein L7/L12 C-terminal domain RG42_RS00735 PF00562 RNA polymerase Rpb2, domain 6 RG42_RS00735 PF04565 RNA polymerase Rpb2, domain 3 RG42_RS00735 PF04561 RNA polymerase Rpb2, domain 2 RG42_RS00735 PF04563 RNA polymerase beta subunit RG42_RS00735 PF04560 RNA polymerase Rpb2, domain 7 RG42_RS00735 PF10385 RNA polymerase beta subunit external 1 domain RG42_RS00740 PF04997 RNA polymerase Rpb1, domain 1 RG42_RS00740 PF00623 RNA polymerase Rpb1, domain 2 RG42_RS00740 PF04983 RNA polymerase Rpb1, domain 3 RG42_RS00740 PF05000 RNA polymerase Rpb1, domain 4 RG42_RS00740 PF04998 RNA polymerase Rpb1, domain 5 RG42_RS00750 PF04055 Radical SAM superfamily RG42_RS00750 PF06968 Biotin and Thiamin Synthesis associated domain RG42_RS00755 PF05690 Thiazole biosynthesis protein ThiG RG42_RS00760 PF02597 ThiS family RG42_RS00765 PF00899 ThiF family RG42_RS00770 PF02581 Thiamine monophosphate synthase RG42_RS00775 PF01964 Radical SAM ThiC family RG42_RS00775 PF13667 ThiC-associated domain RG42_RS00780 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ RG42_RS00785 PF00293 NUDIX domain RG42_RS00785 PF09297 NADH pyrophosphatase zinc ribbon domain RG42_RS00790 PF01208 Uroporphyrinogen decarboxylase (URO-D) RG42_RS00795 PF04493 Endonuclease V RG42_RS00800 PF04222 Protein of unknown function (DUF416) RG42_RS00805 PF00216 Bacterial DNA-binding protein RG42_RS00810 PF07356 Protein of unknown function (DUF1481) RG42_RS00815 PF13801 Heavy-metal resistance RG42_RS00825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG42_RS00825 PF00512 His Kinase A (phospho-acceptor) domain RG42_RS00830 PF02954 Bacterial regulatory protein, Fis family RG42_RS00830 PF00072 Response regulator receiver domain RG42_RS00830 PF00158 Sigma-54 interaction domain RG42_RS00835 PF02843 Phosphoribosylglycinamide synthetase, C domain RG42_RS00835 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RG42_RS00835 PF02844 Phosphoribosylglycinamide synthetase, N domain RG42_RS00840 PF01808 AICARFT/IMPCHase bienzyme RG42_RS00840 PF02142 MGS-like domain RG42_RS00880 PF13673 Acetyltransferase (GNAT) domain RG42_RS00885 PF04204 Homoserine O-succinyltransferase RG42_RS00890 PF01274 Malate synthase RG42_RS00895 PF00463 Isocitrate lyase family RG42_RS00905 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) RG42_RS00910 PF07906 ShET2 enterotoxin, N-terminal region RG42_RS00915 PF01614 Bacterial transcriptional regulator RG42_RS00915 PF09339 IclR helix-turn-helix domain RG42_RS00920 PF02965 Vitamin B12 dependent methionine synthase, activation domain RG42_RS00920 PF02310 B12 binding domain RG42_RS00920 PF02574 Homocysteine S-methyltransferase RG42_RS00920 PF00809 Pterin binding enzyme RG42_RS00920 PF02607 B12 binding domain RG42_RS00925 PF02690 Na+/Pi-cotransporter RG42_RS00930 PF03575 Peptidase family S51 RG42_RS00935 PF00849 RNA pseudouridylate synthase RG42_RS00935 PF01479 S4 domain RG42_RS00940 PF11656 YjbD family (DUF3811) RG42_RS00945 PF01842 ACT domain RG42_RS00945 PF00696 Amino acid kinase family RG42_RS00955 PF00342 Phosphoglucose isomerase RG42_RS00960 PF11106 Exopolysaccharide production protein YjbE RG42_RS00965 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF RG42_RS00970 PF06251 Capsule biosynthesis GfcC RG42_RS00975 PF06082 Exopolysaccharide biosynthesis protein YbjH RG42_RS00980 PF17089 Uncharacterised protein family RG42_RS00990 PF06146 Phosphate-starvation-inducible E RG42_RS00995 PF00083 Sugar (and other) transporter RG42_RS01000 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS01005 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS01005 PF14785 Maltose transport system permease protein MalF P2 domain RG42_RS01010 PF01547 Bacterial extracellular solute-binding protein RG42_RS01020 PF17912 MalK OB fold domain RG42_RS01020 PF00005 ABC transporter RG42_RS01025 PF02264 LamB porin RG42_RS01030 PF07148 Maltose operon periplasmic protein precursor (MalM) RG42_RS01040 PF13599 Pentapeptide repeats (9 copies) RG42_RS01040 PF13981 SopA-like central domain RG42_RS01050 PF04345 Chorismate lyase RG42_RS01055 PF01040 UbiA prenyltransferase family RG42_RS01065 PF01553 Acyltransferase RG42_RS01070 PF01219 Prokaryotic diacylglycerol kinase RG42_RS01075 PF00717 Peptidase S24-like RG42_RS01075 PF01726 LexA DNA binding domain RG42_RS01080 PF01554 MatE RG42_RS01085 PF05532 CsbD-like RG42_RS01090 PF01475 Ferric uptake regulator family RG42_RS01100 PF10897 Protein of unknown function (DUF2713) RG42_RS01105 PF01207 Dihydrouridine synthase (Dus) RG42_RS01110 PF09583 Phage shock protein G (Phageshock_PspG) RG42_RS01115 PF08240 Alcohol dehydrogenase GroES-like domain RG42_RS01115 PF00107 Zinc-binding dehydrogenase RG42_RS01120 PF03796 DnaB-like helicase C terminal domain RG42_RS01120 PF00772 DnaB-like helicase N terminal domain RG42_RS01125 PF00842 Alanine racemase, C-terminal domain RG42_RS01125 PF01168 Alanine racemase, N-terminal domain RG42_RS01130 PF00155 Aminotransferase class I and II RG42_RS01140 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) RG42_RS01145 PF01894 Uncharacterised protein family UPF0047 RG42_RS01150 PF04237 YjbR RG42_RS01155 PF17755 UvrA DNA-binding domain RG42_RS01155 PF00005 ABC transporter RG42_RS01155 PF17760 UvrA interaction domain RG42_RS01160 PF00436 Single-strand binding protein family RG42_RS01165 PF15940 Family of unknown function RG42_RS01175 PF00563 EAL domain RG42_RS01175 PF12792 CSS motif domain associated with EAL RG42_RS01180 PF12833 Helix-turn-helix domain RG42_RS01185 PF00376 MerR family regulatory protein RG42_RS01185 PF09278 MerR, DNA binding RG42_RS01205 PF00860 Permease family RG42_RS01210 PF00999 Sodium/hydrogen exchanger family RG42_RS01215 PF00805 Pentapeptide repeats (8 copies) RG42_RS01220 PF00474 Sodium:solute symporter family RG42_RS01225 PF04341 Protein of unknown function, DUF485 RG42_RS01230 PF13193 AMP-binding enzyme C-terminal domain RG42_RS01230 PF16177 Acetyl-coenzyme A synthetase N-terminus RG42_RS01230 PF00501 AMP-binding enzyme RG42_RS01240 PF02335 Cytochrome c552 RG42_RS01245 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) RG42_RS01245 PF13435 Cytochrome c554 and c-prime RG42_RS01250 PF13247 4Fe-4S dicluster domain RG42_RS01250 PF00037 4Fe-4S binding domain RG42_RS01255 PF03916 Polysulphide reductase, NrfD RG42_RS01260 PF01578 Cytochrome C assembly protein RG42_RS01260 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal RG42_RS01265 PF03918 Cytochrome C biogenesis protein RG42_RS01280 PF00375 Sodium:dicarboxylate symporter family RG42_RS01285 PF08238 Sel1 repeat RG42_RS01295 PF02321 Outer membrane efflux protein RG42_RS01300 PF04632 Fusaric acid resistance protein family RG42_RS01305 PF00529 HlyD membrane-fusion protein of T1SS RG42_RS01305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RG42_RS01310 PF17090 Uncharacterised protein family RG42_RS01315 PF14864 Alkyl sulfatase C-terminal RG42_RS01315 PF00753 Metallo-beta-lactamase superfamily RG42_RS01315 PF14863 Alkyl sulfatase dimerisation RG42_RS01320 PF00480 ROK family RG42_RS01325 PF00834 Ribulose-phosphate 3 epimerase family RG42_RS01330 PF02653 Branched-chain amino acid transport system / permease component RG42_RS01335 PF00005 ABC transporter RG42_RS01340 PF13407 Periplasmic binding protein domain RG42_RS01345 PF01418 Helix-turn-helix domain, rpiR family RG42_RS01345 PF01380 SIS domain RG42_RS01355 PF02502 Ribose/Galactose Isomerase RG42_RS01365 PF12706 Beta-lactamase superfamily domain RG42_RS01370 PF00583 Acetyltransferase (GNAT) family RG42_RS01380 PF07969 Amidohydrolase family RG42_RS01385 PF00005 ABC transporter RG42_RS01395 PF00005 ABC transporter RG42_RS01400 PF06007 Phosphonate metabolism protein PhnJ RG42_RS01405 PF05861 Bacterial phosphonate metabolism protein (PhnI) RG42_RS01410 PF05845 Bacterial phosphonate metabolism protein (PhnH) RG42_RS01415 PF06754 Phosphonate metabolism protein PhnG RG42_RS01420 PF07702 UTRA domain RG42_RS01420 PF00392 Bacterial regulatory proteins, gntR family RG42_RS01435 PF00005 ABC transporter RG42_RS01440 PF06983 3-demethylubiquinone-9 3-methyltransferase RG42_RS01450 PF03831 PhnA domain RG42_RS01450 PF08274 PhnA Zinc-Ribbon RG42_RS01460 PF00350 Dynamin family RG42_RS01465 PF13990 YjcZ-like protein RG42_RS01470 PF08946 Osmosensory transporter coiled coil RG42_RS01470 PF00083 Sugar (and other) transporter RG42_RS01480 PF00512 His Kinase A (phospho-acceptor) domain RG42_RS01480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG42_RS01485 PF00486 Transcriptional regulatory protein, C terminal RG42_RS01485 PF00072 Response regulator receiver domain RG42_RS01490 PF00884 Sulfatase RG42_RS01490 PF08019 Phosphoethanolamine transferase EptA/EptB RG42_RS01495 PF13520 Amino acid permease RG42_RS01500 PF12833 Helix-turn-helix domain RG42_RS01505 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain RG42_RS01505 PF01276 Orn/Lys/Arg decarboxylase, major domain RG42_RS01505 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain RG42_RS01510 PF12833 Helix-turn-helix domain RG42_RS01520 PF11975 Family 4 glycosyl hydrolase C-terminal domain RG42_RS01520 PF02056 Family 4 glycosyl hydrolase RG42_RS01535 PF00665 Integrase core domain RG42_RS01545 PF09997 Predicted membrane protein (DUF2238) RG42_RS01550 PF05683 Fumarase C-terminus RG42_RS01550 PF05681 Fumarate hydratase (Fumerase) RG42_RS01555 PF03605 Anaerobic c4-dicarboxylate membrane transporter RG42_RS01565 PF00072 Response regulator receiver domain RG42_RS01570 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain RG42_RS01570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG42_RS01570 PF17203 Single cache domain 3 RG42_RS01570 PF00989 PAS fold RG42_RS01575 PF06902 Divergent 4Fe-4S mono-cluster RG42_RS01580 PF14542 GCN5-related N-acetyl-transferase RG42_RS01590 PF11080 Endoribonuclease GhoS RG42_RS01595 PF10753 Toxin GhoT_OrtT RG42_RS01600 PF01336 OB-fold nucleic acid binding domain RG42_RS01600 PF00152 tRNA synthetases class II (D, K and N) RG42_RS01605 PF00854 POT family RG42_RS01610 PF01276 Orn/Lys/Arg decarboxylase, major domain RG42_RS01610 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain RG42_RS01610 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain RG42_RS01615 PF13520 Amino acid permease RG42_RS01620 PF18500 CadC C-terminal domain 1 RG42_RS01620 PF00486 Transcriptional regulatory protein, C terminal RG42_RS01640 PF02683 Cytochrome C biogenesis protein transmembrane region RG42_RS01640 PF11412 Disulphide bond corrector protein DsbC RG42_RS01645 PF03091 CutA1 divalent ion tolerance protein RG42_RS01650 PF03605 Anaerobic c4-dicarboxylate membrane transporter RG42_RS01655 PF00206 Lyase RG42_RS01655 PF10415 Fumarase C C-terminus RG42_RS01665 PF04186 FxsA cytoplasmic membrane protein RG42_RS01670 PF13520 Amino acid permease RG42_RS01675 PF00166 Chaperonin 10 Kd subunit RG42_RS01680 PF00118 TCP-1/cpn60 chaperonin family RG42_RS01685 PF13698 Domain of unknown function (DUF4156) RG42_RS01690 PF15922 YjeJ-like RG42_RS01695 PF04055 Radical SAM superfamily RG42_RS01700 PF09285 Elongation factor P, C-terminal RG42_RS01700 PF01132 Elongation factor P (EF-P) OB domain RG42_RS01700 PF08207 Elongation factor P (EF-P) KOW-like domain RG42_RS01705 PF08085 Entericidin EcnA/B family RG42_RS01710 PF08085 Entericidin EcnA/B family RG42_RS01715 PF00893 Small Multidrug Resistance protein RG42_RS01720 PF08212 Lipocalin-like domain RG42_RS01725 PF00144 Beta-lactamase RG42_RS01730 PF02313 Fumarate reductase subunit D RG42_RS01735 PF02300 Fumarate reductase subunit C RG42_RS01740 PF13183 4Fe-4S dicluster domain RG42_RS01740 PF13085 2Fe-2S iron-sulfur cluster binding domain RG42_RS01745 PF02910 Fumarate reductase flavoprotein C-term RG42_RS01745 PF00890 FAD binding domain RG42_RS01750 PF00152 tRNA synthetases class II (D, K and N) RG42_RS01755 PF13520 Amino acid permease RG42_RS01765 PF10840 Protein of unknown function (DUF2645) RG42_RS01770 PF12794 Mechanosensitive ion channel inner membrane domain 1 RG42_RS01770 PF12795 Mechanosensitive ion channel porin domain RG42_RS01770 PF00924 Mechanosensitive ion channel RG42_RS01775 PF02666 Phosphatidylserine decarboxylase RG42_RS01780 PF03193 RsgA GTPase RG42_RS01785 PF00929 Exonuclease RG42_RS01805 PF08331 Domain of unknown function (DUF1730) RG42_RS01810 PF03853 YjeF-related protein N-terminus RG42_RS01810 PF01256 Carbohydrate kinase RG42_RS01815 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE RG42_RS01820 PF01520 N-acetylmuramoyl-L-alanine amidase RG42_RS01825 PF08676 MutL C terminal dimerisation domain RG42_RS01825 PF01119 DNA mismatch repair protein, C-terminal domain RG42_RS01835 PF17209 Hfq protein RG42_RS01840 PF13167 GTP-binding GTPase N-terminal RG42_RS01840 PF01926 50S ribosome-binding GTPase RG42_RS01840 PF16360 GTP-binding GTPase Middle Region RG42_RS01845 PF12221 Bacterial membrane protein N terminal RG42_RS01845 PF01145 SPFH domain / Band 7 family RG42_RS01850 PF01145 SPFH domain / Band 7 family RG42_RS01855 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) RG42_RS01860 PF00709 Adenylosuccinate synthetase RG42_RS01865 PF02082 Transcriptional regulator RG42_RS01870 PF17876 Cold shock domain RG42_RS01870 PF00773 RNB domain RG42_RS01870 PF08461 Ribonuclease R winged-helix domain RG42_RS01870 PF08206 Ribonuclease B OB domain RG42_RS01870 PF00575 S1 RNA binding domain RG42_RS01875 PF08032 RNA 2'-O ribose methyltransferase substrate binding RG42_RS01875 PF00588 SpoU rRNA Methylase family RG42_RS01880 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) RG42_RS01885 PF04012 PspA/IM30 family RG42_RS01890 PF10679 Protein of unknown function (DUF2491) RG42_RS01895 PF03994 Domain of Unknown Function (DUF350) RG42_RS01900 PF06693 Protein of unknown function (DUF1190) RG42_RS01905 PF03738 Glutathionylspermidine synthase preATP-grasp RG42_RS01910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RG42_RS01910 PF02770 Acyl-CoA dehydrogenase, middle domain RG42_RS01910 PF18158 Adaptive response protein AidB N-terminal domain RG42_RS01920 PF07338 Protein of unknown function (DUF1471) RG42_RS01925 PF07338 Protein of unknown function (DUF1471) RG42_RS01930 PF00326 Prolyl oligopeptidase family RG42_RS01935 PF08220 DeoR-like helix-turn-helix domain RG42_RS01935 PF00455 DeoR C terminal sensor domain RG42_RS01945 PF03611 PTS system sugar-specific permease component RG42_RS01950 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RG42_RS01955 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RG42_RS01960 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RG42_RS01965 PF01261 Xylose isomerase-like TIM barrel RG42_RS01970 PF00596 Class II Aldolase and Adducin N-terminal domain RG42_RS01975 PF07338 Protein of unknown function (DUF1471) RG42_RS01985 PF01250 Ribosomal protein S6 RG42_RS01990 PF00436 Single-strand binding protein family RG42_RS01995 PF01084 Ribosomal protein S18 RG42_RS02000 PF01281 Ribosomal protein L9, N-terminal domain RG42_RS02000 PF03948 Ribosomal protein L9, C-terminal domain RG42_RS02005 PF10887 Protein of unknown function (DUF2686) RG42_RS02015 PF01797 Transposase IS200 like RG42_RS02020 PF12323 Helix-turn-helix domain RG42_RS02020 PF07282 Putative transposase DNA-binding domain RG42_RS02020 PF01385 Probable transposase RG42_RS02025 PF17938 Tetracyclin repressor-like, C-terminal domain RG42_RS02030 PF04225 Opacity-associated protein A LysM-like domain RG42_RS02030 PF08525 Opacity-associated protein A N-terminal motif RG42_RS02040 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase RG42_RS02040 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RG42_RS02045 PF00324 Amino acid permease RG42_RS02050 PF01814 Hemerythrin HHE cation binding domain RG42_RS02050 PF04405 Domain of Unknown function (DUF542) RG42_RS02055 PF00892 EamA-like transporter family RG42_RS02060 PF05368 NmrA-like family RG42_RS02065 PF01638 HxlR-like helix-turn-helix RG42_RS02070 PF00149 Calcineurin-like phosphoesterase RG42_RS02070 PF02872 5'-nucleotidase, C-terminal domain RG42_RS02075 PF00459 Inositol monophosphatase family RG42_RS02090 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) RG42_RS02095 PF06526 Protein of unknown function (DUF1107) RG42_RS02100 PF01595 Cyclin M transmembrane N-terminal domain RG42_RS02100 PF03471 Transporter associated domain RG42_RS02100 PF00571 CBS domain RG42_RS02105 PF01625 Peptide methionine sulfoxide reductase RG42_RS02115 PF17243 POTRA domain TamA domain 1 RG42_RS02115 PF07244 Surface antigen variable number repeat RG42_RS02115 PF01103 Surface antigen RG42_RS02120 PF04357 TamB, inner membrane protein subunit of TAM complex RG42_RS02125 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like RG42_RS02130 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin RG42_RS02135 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system RG42_RS02140 PF00719 Inorganic pyrophosphatase RG42_RS02145 PF13407 Periplasmic binding protein domain RG42_RS02150 PF00005 ABC transporter RG42_RS02155 PF02653 Branched-chain amino acid transport system / permease component RG42_RS02160 PF02653 Branched-chain amino acid transport system / permease component RG42_RS02165 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain RG42_RS02170 PF08245 Mur ligase middle domain RG42_RS02170 PF02875 Mur ligase family, glutamate ligase domain RG42_RS02170 PF01225 Mur ligase family, catalytic domain RG42_RS02175 PF04751 Protein of unknown function (DUF615) RG42_RS02180 PF01523 Putative modulator of DNA gyrase RG42_RS02185 PF07361 Cytochrome b562 RG42_RS02200 PF13597 Anaerobic ribonucleoside-triphosphate reductase RG42_RS02200 PF03477 ATP cone domain RG42_RS02205 PF11941 Domain of unknown function (DUF3459) RG42_RS02205 PF00128 Alpha amylase, catalytic domain RG42_RS02210 PF02378 Phosphotransferase system, EIIC RG42_RS02210 PF00367 phosphotransferase system, EIIB RG42_RS02215 PF00356 Bacterial regulatory proteins, lacI family RG42_RS02220 PF00689 Cation transporting ATPase, C-terminus RG42_RS02220 PF00690 Cation transporter/ATPase, N-terminus RG42_RS02225 PF01042 Endoribonuclease L-PSP RG42_RS02230 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain RG42_RS02230 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain RG42_RS02235 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RG42_RS02235 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RG42_RS02240 PF08052 PyrBI operon leader peptide RG42_RS02250 PF01042 Endoribonuclease L-PSP RG42_RS02260 PF00440 Bacterial regulatory proteins, tetR family RG42_RS02265 PF04074 YhcH/YjgK/YiaL RG42_RS02275 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RG42_RS02275 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RG42_RS02280 PF06877 Regulator of ribonuclease activity B RG42_RS02285 PF00583 Acetyltransferase (GNAT) family RG42_RS02290 PF05987 Bacterial protein of unknown function (DUF898) RG42_RS02295 PF08264 Anticodon-binding domain of tRNA RG42_RS02295 PF00133 tRNA synthetases class I (I, L, M and V) RG42_RS02295 PF10458 Valyl tRNA synthetase tRNA binding arm RG42_RS02300 PF04364 DNA polymerase III chi subunit, HolC RG42_RS02310 PF00883 Cytosol aminopeptidase family, catalytic domain RG42_RS02310 PF02789 Cytosol aminopeptidase family, N-terminal domain RG42_RS02315 PF03739 Lipopolysaccharide export system permease LptF/LptG RG42_RS02320 PF03739 Lipopolysaccharide export system permease LptF/LptG RG42_RS02325 PF05872 Bacterial protein of unknown function (DUF853) RG42_RS02330 PF00107 Zinc-binding dehydrogenase RG42_RS02330 PF08240 Alcohol dehydrogenase GroES-like domain RG42_RS02340 PF13356 Arm DNA-binding domain RG42_RS02340 PF00589 Phage integrase family RG42_RS02345 PF13356 Arm DNA-binding domain RG42_RS02345 PF00589 Phage integrase family RG42_RS02365 PF13087 AAA domain RG42_RS02365 PF13091 PLD-like domain RG42_RS02375 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase RG42_RS02385 PF06178 Oligogalacturonate-specific porin protein (KdgM) RG42_RS02395 PF00589 Phage integrase family RG42_RS02400 PF00589 Phage integrase family RG42_RS02410 PF00419 Fimbrial protein RG42_RS02415 PF00419 Fimbrial protein RG42_RS02420 PF02753 Pili assembly chaperone PapD, C-terminal domain RG42_RS02420 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RG42_RS02425 PF13953 PapC C-terminal domain RG42_RS02425 PF13954 PapC N-terminal domain RG42_RS02425 PF00577 Outer membrane usher protein RG42_RS02430 PF00419 Fimbrial protein RG42_RS02440 PF00419 Fimbrial protein RG42_RS02440 PF09160 FimH, mannose binding RG42_RS02450 PF02447 GntP family permease RG42_RS02460 PF03786 D-mannonate dehydratase (UxuA) RG42_RS02465 PF08125 Mannitol dehydrogenase C-terminal domain RG42_RS02465 PF01232 Mannitol dehydrogenase Rossmann domain RG42_RS02475 PF00392 Bacterial regulatory proteins, gntR family RG42_RS02475 PF07729 FCD domain RG42_RS02480 PF03400 IS1 transposase RG42_RS02485 PF03811 InsA N-terminal domain RG42_RS02485 PF12759 InsA C-terminal domain RG42_RS02500 PF10887 Protein of unknown function (DUF2686) RG42_RS02510 PF04965 Gene 25-like lysozyme RG42_RS02515 PF03466 LysR substrate binding domain RG42_RS02515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG42_RS02520 PF01979 Amidohydrolase family RG42_RS02525 PF07670 Nucleoside recognition RG42_RS02530 PF07670 Nucleoside recognition RG42_RS02535 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family RG42_RS02540 PF06779 Uncharacterised MFS-type transporter YbfB RG42_RS02545 PF06977 SdiA-regulated RG42_RS02550 PF11823 Protein of unknown function (DUF3343) RG42_RS02555 PF01869 BadF/BadG/BcrA/BcrD ATPase family RG42_RS02560 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component RG42_RS02565 PF04286 Protein of unknown function (DUF445) RG42_RS02570 PF07690 Major Facilitator Superfamily RG42_RS02580 PF03400 IS1 transposase RG42_RS02585 PF03400 IS1 transposase RG42_RS02600 PF02492 CobW/HypB/UreG, nucleotide-binding domain RG42_RS02600 PF07683 Cobalamin synthesis protein cobW C-terminal domain RG42_RS02605 PF04328 Selenoprotein, putative RG42_RS02610 PF02554 Carbon starvation protein CstA RG42_RS02610 PF13722 5TM C-terminal transporter carbon starvation CstA RG42_RS02615 PF00672 HAMP domain RG42_RS02615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RG42_RS02615 PF02203 Tar ligand binding domain homologue RG42_RS02620 PF07690 Major Facilitator Superfamily RG42_RS02625 PF00392 Bacterial regulatory proteins, gntR family RG42_RS02625 PF07729 FCD domain RG42_RS02630 PF00107 Zinc-binding dehydrogenase RG42_RS02630 PF08240 Alcohol dehydrogenase GroES-like domain RG42_RS02635 PF00884 Sulfatase RG42_RS02640 PF10696 Protein of unknown function (DUF2501) RG42_RS02645 PF01695 IstB-like ATP binding protein RG42_RS02650 PF17948 DnaT DNA-binding domain RG42_RS02655 PF12821 Threonine/Serine exporter, ThrE RG42_RS02660 PF06738 Putative threonine/serine exporter RG42_RS02665 PF00196 Bacterial regulatory proteins, luxR family RG42_RS02670 PF00196 Bacterial regulatory proteins, luxR family RG42_RS02675 PF11575 FhuF 2Fe-2S C-terminal domain RG42_RS02675 PF06276 Ferric iron reductase FhuF-like transporter RG42_RS02680 PF07256 Protein of unknown function (DUF1435) RG42_RS02705 PF08468 Methyltransferase small domain N-terminal RG42_RS02705 PF05175 Methyltransferase small domain RG42_RS02710 PF03603 DNA polymerase III psi subunit RG42_RS02715 PF00583 Acetyltransferase (GNAT) family RG42_RS02720 PF13419 Haloacid dehalogenase-like hydrolase RG42_RS02725 PF00009 Elongation factor Tu GTP binding domain RG42_RS02725 PF03144 Elongation factor Tu domain 2 RG42_RS02725 PF16658 Class II release factor RF3, C-terminal domain RG42_RS02730 PF04972 BON domain RG42_RS02735 PF07043 Protein of unknown function (DUF1328) RG42_RS02740 PF01734 Patatin-like phospholipase RG42_RS02745 PF01026 TatD related DNase RG42_RS02755 PF04055 Radical SAM superfamily RG42_RS02760 PF11230 Protein of unknown function (DUF3029) RG42_RS02770 PF01791 DeoC/LacD family aldolase RG42_RS02775 PF00591 Glycosyl transferase family, a/b domain RG42_RS02775 PF02885 Glycosyl transferase family, helical bundle domain RG42_RS02775 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain RG42_RS02780 PF01676 Metalloenzyme superfamily RG42_RS02785 PF01048 Phosphorylase superfamily RG42_RS02800 PF18429 Domain of unknown function (DUF5609) RG42_RS02805 PF18073 Rubredoxin metal binding domain RG42_RS02810 PF01381 Helix-turn-helix RG42_RS02810 PF13521 AAA domain RG42_RS02820 PF00005 ABC transporter RG42_RS02820 PF12848 ABC transporter RG42_RS02830 PF01464 Transglycosylase SLT domain RG42_RS02830 PF14718 Soluble lytic murein transglycosylase L domain RG42_RS02835 PF01371 Trp repressor protein RG42_RS02840 PF01931 Protein of unknown function DUF84 RG42_RS02845 PF00300 Histidine phosphatase superfamily (branch 1) RG42_RS02850 PF12833 Helix-turn-helix domain RG42_RS02850 PF06445 GyrI-like small molecule binding domain RG42_RS02855 PF05981 CreA protein RG42_RS02860 PF00072 Response regulator receiver domain RG42_RS02860 PF00486 Transcriptional regulatory protein, C terminal RG42_RS02865 PF00512 His Kinase A (phospho-acceptor) domain RG42_RS02865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG42_RS02865 PF00672 HAMP domain RG42_RS02870 PF06123 Inner membrane protein CreD RG42_RS02875 PF00486 Transcriptional regulatory protein, C terminal RG42_RS02875 PF00072 Response regulator receiver domain RG42_RS02885 PF00588 SpoU rRNA Methylase family RG42_RS02890 PF08254 Threonine leader peptide RG42_RS02895 PF13840 ACT domain RG42_RS02895 PF00696 Amino acid kinase family RG42_RS02895 PF00742 Homoserine dehydrogenase RG42_RS02895 PF01842 ACT domain RG42_RS02895 PF03447 Homoserine dehydrogenase, NAD binding domain RG42_RS02900 PF00288 GHMP kinases N terminal domain RG42_RS02900 PF08544 GHMP kinases C terminal RG42_RS02905 PF14821 Threonine synthase N terminus RG42_RS02905 PF00291 Pyridoxal-phosphate dependent enzyme RG42_RS02915 PF10697 Protein of unknown function (DUF2502) RG42_RS02920 PF03883 Peroxide stress protein YaaA RG42_RS02925 PF01235 Sodium:alanine symporter family RG42_RS02930 PF00923 Transaldolase/Fructose-6-phosphate aldolase RG42_RS02935 PF00994 Probable molybdopterin binding domain RG42_RS02940 PF01184 GPR1/FUN34/yaaH family RG42_RS02945 PF03981 Ubiquinol-cytochrome C chaperone RG42_RS02945 PF13099 Domain of unknown function (DUF3944) RG42_RS02950 PF10807 Protein of unknown function (DUF2541) RG42_RS02955 PF00012 Hsp70 protein RG42_RS02960 PF00684 DnaJ central domain RG42_RS02960 PF01556 DnaJ C terminal domain RG42_RS02960 PF00226 DnaJ domain RG42_RS02965 PF01848 Hok/gef family RG42_RS02975 PF06965 Na+/H+ antiporter 1 RG42_RS02980 PF03466 LysR substrate binding domain RG42_RS02980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG42_RS02990 PF13953 PapC C-terminal domain RG42_RS02990 PF00577 Outer membrane usher protein RG42_RS02990 PF13954 PapC N-terminal domain RG42_RS02995 PF02753 Pili assembly chaperone PapD, C-terminal domain RG42_RS02995 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RG42_RS03010 PF01649 Ribosomal protein S20 RG42_RS03015 PF10837 Protein of unknown function (DUF2575) RG42_RS03020 PF06574 FAD synthetase RG42_RS03020 PF01687 Riboflavin kinase RG42_RS03025 PF06827 Zinc finger found in FPG and IleRS RG42_RS03025 PF00133 tRNA synthetases class I (I, L, M and V) RG42_RS03025 PF08264 Anticodon-binding domain of tRNA RG42_RS03030 PF01252 Signal peptidase (SPase) II RG42_RS03035 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RG42_RS03040 PF02401 LytB protein RG42_RS03045 PF01156 Inosine-uridine preferring nucleoside hydrolase RG42_RS03050 PF01113 Dihydrodipicolinate reductase, N-terminus RG42_RS03050 PF05173 Dihydrodipicolinate reductase, C-terminus RG42_RS03055 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain RG42_RS03055 PF00117 Glutamine amidotransferase class-I RG42_RS03060 PF02142 MGS-like domain RG42_RS03060 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RG42_RS03060 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RG42_RS03070 PF07180 CaiF/GrlA transcriptional regulator RG42_RS03075 PF00132 Bacterial transferase hexapeptide (six repeats) RG42_RS03080 PF00378 Enoyl-CoA hydratase/isomerase RG42_RS03085 PF00501 AMP-binding enzyme RG42_RS03085 PF13193 AMP-binding enzyme C-terminal domain RG42_RS03090 PF02515 CoA-transferase family III RG42_RS03095 PF02770 Acyl-CoA dehydrogenase, middle domain RG42_RS03095 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RG42_RS03095 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RG42_RS03100 PF02028 BCCT, betaine/carnitine/choline family transporter RG42_RS03105 PF01012 Electron transfer flavoprotein domain RG42_RS03110 PF00766 Electron transfer flavoprotein FAD-binding domain RG42_RS03110 PF01012 Electron transfer flavoprotein domain RG42_RS03115 PF01494 FAD binding domain RG42_RS03125 PF00083 Sugar (and other) transporter RG42_RS03130 PF02525 Flavodoxin-like fold RG42_RS03135 PF00999 Sodium/hydrogen exchanger family RG42_RS03135 PF02254 TrkA-N domain RG42_RS03140 PF00186 Dihydrofolate reductase RG42_RS03145 PF00149 Calcineurin-like phosphoesterase RG42_RS03150 PF04379 ApaG domain RG42_RS03155 PF00398 Ribosomal RNA adenine dimethylase RG42_RS03160 PF04166 Pyridoxal phosphate biosynthetic protein PdxA RG42_RS03165 PF09312 SurA N-terminal domain RG42_RS03165 PF00639 PPIC-type PPIASE domain RG42_RS03170 PF04453 LPS transport system D RG42_RS03170 PF03968 OstA-like protein RG42_RS03175 PF05099 Tellurite resistance protein TerB RG42_RS03175 PF00226 DnaJ domain RG42_RS03195 PF00849 RNA pseudouridylate synthase RG42_RS03200 PF12137 RNA polymerase recycling family C-terminal RG42_RS03200 PF18339 RapA N-terminal Tudor like domain 1 RG42_RS03200 PF18337 RapA N-terminal Tudor like domain RG42_RS03200 PF00176 SNF2 family N-terminal domain RG42_RS03200 PF00271 Helicase conserved C-terminal domain RG42_RS03205 PF03104 DNA polymerase family B, exonuclease domain RG42_RS03205 PF00136 DNA polymerase family B RG42_RS03210 PF00596 Class II Aldolase and Adducin N-terminal domain RG42_RS03220 PF02610 L-arabinose isomerase RG42_RS03220 PF11762 L-arabinose isomerase C-terminal domain RG42_RS03225 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RG42_RS03235 PF02311 AraC-like ligand binding domain RG42_RS03235 PF12833 Helix-turn-helix domain RG42_RS03240 PF09335 SNARE associated Golgi protein RG42_RS03245 PF00005 ABC transporter RG42_RS03250 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS03260 PF12793 Sugar transport-related sRNA regulator N-term RG42_RS03260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RG42_RS03270 PF07690 Major Facilitator Superfamily RG42_RS03275 PF00694 Aconitase C-terminal domain RG42_RS03280 PF00330 Aconitase family (aconitate hydratase) RG42_RS03285 PF00180 Isocitrate/isopropylmalate dehydrogenase RG42_RS03290 PF08502 LeuA allosteric (dimerisation) domain RG42_RS03290 PF00682 HMGL-like RG42_RS03295 PF08054 Leucine operon leader peptide RG42_RS03300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG42_RS03300 PF03466 LysR substrate binding domain RG42_RS03305 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RG42_RS03305 PF00205 Thiamine pyrophosphate enzyme, central domain RG42_RS03305 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RG42_RS03310 PF10369 Small subunit of acetolactate synthase RG42_RS03320 PF00356 Bacterial regulatory proteins, lacI family RG42_RS03320 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RG42_RS03330 PF02381 MraZ protein, putative antitoxin-like RG42_RS03335 PF01795 MraW methylase family RG42_RS03340 PF04999 Cell division protein FtsL RG42_RS03345 PF00905 Penicillin binding protein transpeptidase domain RG42_RS03345 PF03717 Penicillin-binding Protein dimerisation domain RG42_RS03350 PF02875 Mur ligase family, glutamate ligase domain RG42_RS03350 PF01225 Mur ligase family, catalytic domain RG42_RS03350 PF08245 Mur ligase middle domain RG42_RS03355 PF02875 Mur ligase family, glutamate ligase domain RG42_RS03355 PF01225 Mur ligase family, catalytic domain RG42_RS03355 PF08245 Mur ligase middle domain RG42_RS03360 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 RG42_RS03360 PF00953 Glycosyl transferase family 4 RG42_RS03365 PF02875 Mur ligase family, glutamate ligase domain RG42_RS03365 PF08245 Mur ligase middle domain RG42_RS03370 PF01098 Cell cycle protein RG42_RS03375 PF03033 Glycosyltransferase family 28 N-terminal domain RG42_RS03375 PF04101 Glycosyltransferase family 28 C-terminal domain RG42_RS03380 PF01225 Mur ligase family, catalytic domain RG42_RS03380 PF08245 Mur ligase middle domain RG42_RS03380 PF02875 Mur ligase family, glutamate ligase domain RG42_RS03385 PF01820 D-ala D-ala ligase N-terminus RG42_RS03385 PF07478 D-ala D-ala ligase C-terminus RG42_RS03390 PF08478 POTRA domain, FtsQ-type RG42_RS03390 PF03799 Cell division protein FtsQ RG42_RS03395 PF02491 SHS2 domain inserted in FTSA RG42_RS03400 PF00091 Tubulin/FtsZ family, GTPase domain RG42_RS03400 PF12327 FtsZ family, C-terminal domain RG42_RS03405 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase RG42_RS03410 PF06558 Secretion monitor precursor protein (SecM) RG42_RS03415 PF01043 SecA preprotein cross-linking domain RG42_RS03415 PF02810 SEC-C motif RG42_RS03415 PF07517 SecA DEAD-like domain RG42_RS03415 PF07516 SecA Wing and Scaffold domain RG42_RS03420 PF00293 NUDIX domain RG42_RS03425 PF03884 DNA gyrase inhibitor YacG RG42_RS03430 PF07072 Cell division protein RG42_RS03435 PF01121 Dephospho-CoA kinase RG42_RS03440 PF00478 IMP dehydrogenase / GMP reductase domain RG42_RS03445 PF00482 Type II secretion system (T2SS), protein F RG42_RS03450 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain RG42_RS03450 PF00437 Type II/IV secretion system protein RG42_RS03455 PF07963 Prokaryotic N-terminal methylation motif RG42_RS03465 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain RG42_RS03465 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain RG42_RS03470 PF01510 N-acetylmuramoyl-L-alanine amidase RG42_RS03475 PF17113 Regulatory signalling modulator protein AmpE RG42_RS03480 PF00324 Amino acid permease RG42_RS03485 PF00392 Bacterial regulatory proteins, gntR family RG42_RS03485 PF07729 FCD domain RG42_RS03495 PF00456 Transketolase, thiamine diphosphate binding domain RG42_RS03495 PF17831 Pyruvate dehydrogenase E1 component middle domain RG42_RS03500 PF00364 Biotin-requiring enzyme RG42_RS03500 PF02817 e3 binding domain RG42_RS03500 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RG42_RS03505 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RG42_RS03505 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG42_RS03510 PF11737 Protein of unknown function (DUF3300) RG42_RS03520 PF11791 Aconitate B N-terminal domain RG42_RS03520 PF06434 Aconitate hydratase 2 N-terminus RG42_RS03520 PF00330 Aconitase family (aconitate hydratase) RG42_RS03525 PF06062 Uncharacterised protein family (UPF0231) RG42_RS03530 PF02675 S-adenosylmethionine decarboxylase RG42_RS03535 PF17284 Spermidine synthase tetramerisation domain RG42_RS03540 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) RG42_RS03545 PF07732 Multicopper oxidase RG42_RS03545 PF07731 Multicopper oxidase RG42_RS03545 PF00394 Multicopper oxidase RG42_RS03550 PF01011 PQQ enzyme repeat RG42_RS03555 PF00156 Phosphoribosyl transferase domain RG42_RS03560 PF00484 Carbonic anhydrase RG42_RS03565 PF00005 ABC transporter RG42_RS03570 PF01061 ABC-2 type transporter RG42_RS03575 PF03610 PTS system fructose IIA component RG42_RS03580 PF01522 Polysaccharide deacetylase RG42_RS03585 PF02261 Aspartate decarboxylase RG42_RS03600 PF04754 Putative transposase, YhgA-like RG42_RS03605 PF02569 Pantoate-beta-alanine ligase RG42_RS03610 PF02548 Ketopantoate hydroxymethyltransferase RG42_RS03615 PF00419 Fimbrial protein RG42_RS03620 PF00419 Fimbrial protein RG42_RS03625 PF00419 Fimbrial protein RG42_RS03630 PF00419 Fimbrial protein RG42_RS03635 PF13953 PapC C-terminal domain RG42_RS03635 PF13954 PapC N-terminal domain RG42_RS03635 PF00577 Outer membrane usher protein RG42_RS03640 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RG42_RS03640 PF02753 Pili assembly chaperone PapD, C-terminal domain RG42_RS03645 PF00419 Fimbrial protein RG42_RS03650 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) RG42_RS03655 PF12627 Probable RNA and SrmB- binding site of polymerase A RG42_RS03655 PF12626 Polymerase A arginine-rich C-terminus RG42_RS03655 PF01743 Poly A polymerase head domain RG42_RS03660 PF00749 tRNA synthetases class I (E and Q), catalytic domain RG42_RS03665 PF01258 Prokaryotic dksA/traR C4-type zinc finger RG42_RS03670 PF03749 Sugar fermentation stimulation protein RE domain RG42_RS03670 PF17746 SfsA N-terminal OB domain RG42_RS03675 PF02834 LigT like Phosphoesterase RG42_RS03680 PF00271 Helicase conserved C-terminal domain RG42_RS03680 PF04408 Helicase associated domain (HA2) RG42_RS03680 PF00270 DEAD/DEAH box helicase RG42_RS03680 PF08482 ATP-dependent helicase C-terminal RG42_RS03690 PF14814 Bifunctional transglycosylase second domain RG42_RS03690 PF00905 Penicillin binding protein transpeptidase domain RG42_RS03690 PF00912 Transglycosylase RG42_RS03690 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal RG42_RS03695 PF07715 TonB-dependent Receptor Plug Domain RG42_RS03695 PF00593 TonB dependent receptor RG42_RS03700 PF00005 ABC transporter RG42_RS03705 PF01497 Periplasmic binding protein RG42_RS03710 PF01032 FecCD transport family RG42_RS03715 PF00202 Aminotransferase class-III RG42_RS03720 PF00654 Voltage gated chloride channel RG42_RS03725 PF01521 Iron-sulphur cluster biosynthesis RG42_RS03730 PF03458 UPF0126 domain RG42_RS03735 PF01497 Periplasmic binding protein RG42_RS03740 PF01048 Phosphorylase superfamily RG42_RS03745 PF01966 HD domain RG42_RS03745 PF13286 Phosphohydrolase-associated domain RG42_RS03755 PF00595 PDZ domain RG42_RS03760 PF05651 Putative sugar diacid recognition RG42_RS03760 PF13556 PucR C-terminal helix-turn-helix domain RG42_RS03760 PF17853 GGDEF-like domain RG42_RS03765 PF11944 Protein of unknown function (DUF3461) RG42_RS03770 PF00149 Calcineurin-like phosphoesterase RG42_RS03775 PF00132 Bacterial transferase hexapeptide (six repeats) RG42_RS03775 PF14602 Hexapeptide repeat of succinyl-transferase RG42_RS03775 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal RG42_RS03780 PF01842 ACT domain RG42_RS03780 PF01909 Nucleotidyltransferase domain RG42_RS03780 PF08335 GlnD PII-uridylyltransferase RG42_RS03780 PF01966 HD domain RG42_RS03785 PF00557 Metallopeptidase family M24 RG42_RS03795 PF00318 Ribosomal protein S2 RG42_RS03805 PF00889 Elongation factor TS RG42_RS03810 PF00696 Amino acid kinase family RG42_RS03815 PF01765 Ribosome recycling factor RG42_RS03820 PF13288 DXP reductoisomerase C-terminal domain RG42_RS03820 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase RG42_RS03820 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain RG42_RS03825 PF01255 Putative undecaprenyl diphosphate synthase RG42_RS03835 PF17820 PDZ domain RG42_RS03835 PF02163 Peptidase family M50 RG42_RS03840 PF07244 Surface antigen variable number repeat RG42_RS03840 PF01103 Surface antigen RG42_RS03845 PF03938 Outer membrane protein (OmpH-like) RG42_RS03850 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD RG42_RS03850 PF00132 Bacterial transferase hexapeptide (six repeats) RG42_RS03855 PF07977 FabA-like domain RG42_RS03860 PF00132 Bacterial transferase hexapeptide (six repeats) RG42_RS03860 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 RG42_RS03865 PF02684 Lipid-A-disaccharide synthetase RG42_RS03870 PF01351 Ribonuclease HII RG42_RS03875 PF07733 Bacterial DNA polymerase III alpha NTPase domain RG42_RS03875 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RG42_RS03875 PF01336 OB-fold nucleic acid binding domain RG42_RS03875 PF02811 PHP domain RG42_RS03875 PF14579 Helix-hairpin-helix motif RG42_RS03880 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit RG42_RS03885 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain RG42_RS03885 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain RG42_RS03885 PF01276 Orn/Lys/Arg decarboxylase, major domain RG42_RS03890 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RG42_RS03895 PF01171 PP-loop family RG42_RS03895 PF11734 TilS substrate C-terminal domain RG42_RS03895 PF09179 TilS substrate binding domain RG42_RS03900 PF07073 Modulator of Rho-dependent transcription termination (ROF) RG42_RS03905 PF06786 Uncharacterised protein family (UPF0253) RG42_RS03910 PF07152 YaeQ protein RG42_RS03915 PF00472 RF-1 domain RG42_RS03920 PF04170 NlpE N-terminal domain RG42_RS03920 PF17185 NlpE C-terminal OB domain RG42_RS03925 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family RG42_RS03930 PF03129 Anticodon binding domain RG42_RS03930 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RG42_RS03930 PF04073 Aminoacyl-tRNA editing domain RG42_RS03935 PF18389 TrmO C-terminal domain RG42_RS03935 PF01980 tRNA-methyltransferase O RG42_RS03940 PF16358 RcsF lipoprotein RG42_RS03945 PF03180 NLPA lipoprotein RG42_RS03950 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS03955 PF09383 NIL domain RG42_RS03955 PF00005 ABC transporter RG42_RS03995 PF00248 Aldo/keto reductase family RG42_RS04000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG42_RS04000 PF03466 LysR substrate binding domain RG42_RS04005 PF03372 Endonuclease/Exonuclease/phosphatase family RG42_RS04010 PF08241 Methyltransferase domain RG42_RS04015 PF01464 Transglycosylase SLT domain RG42_RS04015 PF01476 LysM domain RG42_RS04020 PF00753 Metallo-beta-lactamase superfamily RG42_RS04020 PF16123 Hydroxyacylglutathione hydrolase C-terminus RG42_RS04025 PF08241 Methyltransferase domain RG42_RS04030 PF00075 RNase H RG42_RS04035 PF00929 Exonuclease RG42_RS04060 PF05638 Type VI secretion system effector, Hcp RG42_RS04070 PF14331 ImcF-related N-terminal domain RG42_RS04070 PF06761 Intracellular multiplication and human macrophage-killing RG42_RS04070 PF06744 Type VI secretion protein IcmF C-terminal RG42_RS04085 PF10431 C-terminal, D2-small domain, of ClpB protein RG42_RS04085 PF07724 AAA domain (Cdc48 subfamily) RG42_RS04085 PF17871 AAA lid domain RG42_RS04085 PF00004 ATPase family associated with various cellular activities (AAA) RG42_RS04095 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE RG42_RS04115 PF05947 Type VI secretion system, TssF RG42_RS04125 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath RG42_RS04145 PF05638 Type VI secretion system effector, Hcp RG42_RS04155 PF04717 Type VI secretion system, phage-baseplate injector RG42_RS04160 PF14220 Domain of unknown function (DUF4329) RG42_RS04160 PF05593 RHS Repeat RG42_RS04160 PF03527 RHS protein RG42_RS04175 PF00795 Carbon-nitrogen hydrolase RG42_RS04185 PF09317 Domain of unknown function (DUF1974) RG42_RS04185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RG42_RS04185 PF02770 Acyl-CoA dehydrogenase, middle domain RG42_RS04185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RG42_RS04190 PF13580 SIS domain RG42_RS04195 PF13230 Glutamine amidotransferases class-II RG42_RS04200 PF03734 L,D-transpeptidase catalytic domain RG42_RS04205 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ RG42_RS04210 PF04221 RelB antitoxin RG42_RS04215 PF00877 NlpC/P60 family RG42_RS04230 PF00771 FHIPEP family RG42_RS04235 PF00691 OmpA family RG42_RS04235 PF13677 Membrane MotB of proton-channel complex MotA/MotB RG42_RS04240 PF11798 IMS family HHH motif RG42_RS04240 PF00817 impB/mucB/samB family RG42_RS04240 PF11799 impB/mucB/samB family C-terminal domain RG42_RS04250 PF13957 Toxin YafO, type II toxin-antitoxin system RG42_RS04255 PF13673 Acetyltransferase (GNAT) domain RG42_RS04270 PF00472 RF-1 domain RG42_RS04275 PF01546 Peptidase family M20/M25/M40 RG42_RS04275 PF07687 Peptidase dimerisation domain RG42_RS04280 PF00156 Phosphoribosyl transferase domain RG42_RS04285 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) RG42_RS04290 PF07417 Sigma factor-binding transcriptional regulator Crl RG42_RS04295 PF00267 Gram-negative porin RG42_RS04300 PF01472 PUA domain RG42_RS04300 PF00696 Amino acid kinase family RG42_RS04305 PF00171 Aldehyde dehydrogenase family RG42_RS04315 PF00589 Phage integrase family RG42_RS04345 PF07157 DNA circularisation protein N-terminus RG42_RS04355 PF13005 zinc-finger binding domain of transposase IS66 RG42_RS04355 PF13007 Transposase C of IS166 homeodomain RG42_RS04355 PF13817 IS66 C-terminal element RG42_RS04355 PF03050 Transposase IS66 family RG42_RS04360 PF13005 zinc-finger binding domain of transposase IS66 RG42_RS04360 PF13007 Transposase C of IS166 homeodomain RG42_RS04360 PF03050 Transposase IS66 family RG42_RS04360 PF13817 IS66 C-terminal element RG42_RS04365 PF05717 IS66 Orf2 like protein RG42_RS04390 PF04865 Baseplate J-like protein RG42_RS04395 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) RG42_RS04410 PF14602 Hexapeptide repeat of succinyl-transferase RG42_RS04410 PF17836 PglD N-terminal domain RG42_RS04410 PF00132 Bacterial transferase hexapeptide (six repeats) RG42_RS04415 PF01575 MaoC like domain RG42_RS04435 PF03466 LysR substrate binding domain RG42_RS04440 PF13478 XdhC Rossmann domain RG42_RS04440 PF02625 XdhC and CoxI family RG42_RS04450 PF00941 FAD binding domain in molybdopterin dehydrogenase RG42_RS04450 PF03450 CO dehydrogenase flavoprotein C-terminal domain RG42_RS04455 PF01799 [2Fe-2S] binding domain RG42_RS04455 PF00111 2Fe-2S iron-sulfur cluster binding domain RG42_RS04465 PF07274 Protein of unknown function (DUF1440) RG42_RS04475 PF03692 Putative zinc- or iron-chelating domain RG42_RS04490 PF16967 E-set like domain RG42_RS04490 PF15976 CS1-pili formation C-terminal RG42_RS04495 PF18649 EcpB C-terminal domain RG42_RS04500 PF16449 Fimbrillin MatB RG42_RS04505 PF00196 Bacterial regulatory proteins, luxR family RG42_RS04520 PF00444 Ribosomal protein L36 RG42_RS04525 PF01197 Ribosomal protein L31 RG42_RS04540 PF11924 Inverse autotransporter, beta-domain RG42_RS04545 PF12833 Helix-turn-helix domain RG42_RS04550 PF04224 Protein of unknown function, DUF417 RG42_RS04555 PF07338 Protein of unknown function (DUF1471) RG42_RS04560 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RG42_RS04560 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG42_RS04565 PF12833 Helix-turn-helix domain RG42_RS04565 PF12852 Cupin RG42_RS04570 PF02754 Cysteine-rich domain RG42_RS04575 PF02589 LUD domain RG42_RS04575 PF11870 Domain of unknown function (DUF3390) RG42_RS04575 PF13183 4Fe-4S dicluster domain RG42_RS04580 PF02589 LUD domain RG42_RS04595 PF05199 GMC oxidoreductase RG42_RS04595 PF00732 GMC oxidoreductase RG42_RS04600 PF00171 Aldehyde dehydrogenase family RG42_RS04605 PF00440 Bacterial regulatory proteins, tetR family RG42_RS04605 PF13977 BetI-type transcriptional repressor, C-terminal RG42_RS04615 PF02028 BCCT, betaine/carnitine/choline family transporter RG42_RS04630 PF00196 Bacterial regulatory proteins, luxR family RG42_RS04630 PF00563 EAL domain RG42_RS04635 PF03466 LysR substrate binding domain RG42_RS04635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG42_RS04640 PF06496 Protein of unknown function (DUF1097) RG42_RS04650 PF12796 Ankyrin repeats (3 copies) RG42_RS04655 PF11392 Protein of unknown function (DUF2877) RG42_RS04660 PF02629 CoA binding domain RG42_RS04660 PF00549 CoA-ligase RG42_RS04665 PF06545 Protein of unknown function (DUF1116) RG42_RS04675 PF00696 Amino acid kinase family RG42_RS04680 PF07969 Amidohydrolase family RG42_RS04685 PF00107 Zinc-binding dehydrogenase RG42_RS04685 PF08240 Alcohol dehydrogenase GroES-like domain RG42_RS04700 PF01810 LysE type translocator RG42_RS04705 PF07338 Protein of unknown function (DUF1471) RG42_RS04710 PF06506 Propionate catabolism activator RG42_RS04710 PF00158 Sigma-54 interaction domain RG42_RS04710 PF02954 Bacterial regulatory protein, Fis family RG42_RS04725 PF00285 Citrate synthase, C-terminal domain RG42_RS04730 PF03972 MmgE/PrpD family RG42_RS04735 PF13193 AMP-binding enzyme C-terminal domain RG42_RS04735 PF16177 Acetyl-coenzyme A synthetase N-terminus RG42_RS04735 PF00501 AMP-binding enzyme RG42_RS04745 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin RG42_RS04750 PF07969 Amidohydrolase family RG42_RS04755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG42_RS04755 PF03466 LysR substrate binding domain RG42_RS04760 PF00484 Carbonic anhydrase RG42_RS04765 PF02560 Cyanate lyase C-terminal domain RG42_RS04770 PF07690 Major Facilitator Superfamily RG42_RS04775 PF12464 Maltose acetyltransferase RG42_RS04775 PF00132 Bacterial transferase hexapeptide (six repeats) RG42_RS04780 PF01306 LacY proton/sugar symporter RG42_RS04785 PF02837 Glycosyl hydrolases family 2, sugar binding domain RG42_RS04785 PF16353 Domain of unknown function(DUF4981) RG42_RS04785 PF00703 Glycosyl hydrolases family 2 RG42_RS04785 PF02836 Glycosyl hydrolases family 2, TIM barrel domain RG42_RS04785 PF02929 Beta galactosidase small chain RG42_RS04795 PF00356 Bacterial regulatory proteins, lacI family RG42_RS04800 PF01614 Bacterial transcriptional regulator RG42_RS04800 PF09339 IclR helix-turn-helix domain RG42_RS04805 PF01494 FAD binding domain RG42_RS04810 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase RG42_RS04815 PF12697 Alpha/beta hydrolase family RG42_RS04820 PF01557 Fumarylacetoacetate (FAA) hydrolase family RG42_RS04825 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation RG42_RS04825 PF01118 Semialdehyde dehydrogenase, NAD binding domain RG42_RS04830 PF07836 DmpG-like communication domain RG42_RS04830 PF00682 HMGL-like RG42_RS04845 PF07690 Major Facilitator Superfamily RG42_RS04850 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) RG42_RS04855 PF00756 Putative esterase RG42_RS04860 PF08240 Alcohol dehydrogenase GroES-like domain RG42_RS04860 PF00107 Zinc-binding dehydrogenase RG42_RS04865 PF02583 Metal-sensitive transcriptional repressor RG42_RS04875 PF00132 Bacterial transferase hexapeptide (six repeats) RG42_RS04880 PF00535 Glycosyl transferase family 2 RG42_RS04885 PF02585 GlcNAc-PI de-N-acetylase RG42_RS04895 PF04069 Substrate binding domain of ABC-type glycine betaine transport system RG42_RS04900 PF00005 ABC transporter RG42_RS04905 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS04910 PF02668 Taurine catabolism dioxygenase TauD, TfdA family RG42_RS04915 PF00490 Delta-aminolevulinic acid dehydratase RG42_RS04925 PF03212 Pertactin RG42_RS04925 PF03797 Autotransporter beta-domain RG42_RS04930 PF15977 Winged helix-turn-helix DNA binding RG42_RS04935 PF00144 Beta-lactamase RG42_RS04945 PF05992 SbmA/BacA-like family RG42_RS04950 PF07759 Protein of unknown function (DUF1615) RG42_RS04955 PF10954 Protein of unknown function (DUF2755) RG42_RS04960 PF10953 Protein of unknown function (DUF2754) RG42_RS04965 PF07478 D-ala D-ala ligase C-terminus RG42_RS04965 PF01820 D-ala D-ala ligase N-terminus RG42_RS04975 PF10796 Sigma-S stabilisation anti-adaptor protein RG42_RS04980 PF00245 Alkaline phosphatase RG42_RS04985 PF07769 psiF repeat RG42_RS04990 PF05230 MASE2 domain RG42_RS04990 PF00990 Diguanylate cyclase, GGDEF domain RG42_RS04995 PF03807 NADP oxidoreductase coenzyme F420-dependent RG42_RS04995 PF14748 Pyrroline-5-carboxylate reductase dimerisation RG42_RS05000 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 RG42_RS05005 PF01202 Shikimate kinase RG42_RS05010 PF16362 YaiA protein RG42_RS05020 PF07302 AroM protein RG42_RS05025 PF06865 Pyrimidine/purine nucleoside phosphorylase RG42_RS05035 PF10971 Protein of unknown function (DUF2773) RG42_RS05040 PF04381 Putative exonuclease, RdgC RG42_RS05045 PF00480 ROK family RG42_RS05055 PF07690 Major Facilitator Superfamily RG42_RS05060 PF13476 AAA domain RG42_RS05065 PF00149 Calcineurin-like phosphoesterase RG42_RS05065 PF12320 Type 5 capsule protein repressor C-terminal domain RG42_RS05070 PF00486 Transcriptional regulatory protein, C terminal RG42_RS05070 PF00072 Response regulator receiver domain RG42_RS05075 PF00989 PAS fold RG42_RS05075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG42_RS05075 PF11808 Phosphate regulon sensor protein PhoR RG42_RS05075 PF00512 His Kinase A (phospho-acceptor) domain RG42_RS05080 PF05525 Branched-chain amino acid transport protein RG42_RS05085 PF00324 Amino acid permease RG42_RS05090 PF00128 Alpha amylase, catalytic domain RG42_RS05090 PF02903 Alpha amylase, N-terminal ig-like domain RG42_RS05095 PF04336 Acyl carrier protein phosphodiesterase RG42_RS05100 PF02547 Queuosine biosynthesis protein RG42_RS05105 PF01702 Queuine tRNA-ribosyltransferase RG42_RS05110 PF02699 Preprotein translocase subunit RG42_RS05115 PF13721 SecD export protein N-terminal TM region RG42_RS05115 PF07549 SecD/SecF GG Motif RG42_RS05115 PF02355 Protein export membrane protein RG42_RS05120 PF07549 SecD/SecF GG Motif RG42_RS05120 PF02355 Protein export membrane protein RG42_RS05125 PF01844 HNH endonuclease RG42_RS05130 PF03502 Nucleoside-specific channel-forming protein, Tsx RG42_RS05135 PF11622 Protein of unknown function (DUF3251) RG42_RS05140 PF03477 ATP cone domain RG42_RS05145 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RG42_RS05145 PF01872 RibD C-terminal domain RG42_RS05150 PF00885 6,7-dimethyl-8-ribityllumazine synthase RG42_RS05155 PF01029 NusB family RG42_RS05160 PF00586 AIR synthase related protein, N-terminal domain RG42_RS05160 PF02769 AIR synthase related protein, C-terminal domain RG42_RS05165 PF04608 Phosphatidylglycerophosphatase A RG42_RS05170 PF00248 Aldo/keto reductase family RG42_RS05175 PF13292 1-deoxy-D-xylulose-5-phosphate synthase RG42_RS05175 PF02780 Transketolase, C-terminal domain RG42_RS05175 PF02779 Transketolase, pyrimidine binding domain RG42_RS05180 PF00348 Polyprenyl synthetase RG42_RS05185 PF02609 Exonuclease VII small subunit RG42_RS05190 PF02568 Thiamine biosynthesis protein (ThiI) RG42_RS05190 PF02926 THUMP domain RG42_RS05195 PF01965 DJ-1/PfpI family RG42_RS05200 PF08546 Ketopantoate reductase PanE/ApbA C terminal RG42_RS05200 PF02558 Ketopantoate reductase PanE/ApbA RG42_RS05205 PF04461 Protein of unknown function (DUF520) RG42_RS05210 PF07690 Major Facilitator Superfamily RG42_RS05215 PF01040 UbiA prenyltransferase family RG42_RS05220 PF03626 Prokaryotic Cytochrome C oxidase subunit IV RG42_RS05225 PF00510 Cytochrome c oxidase subunit III RG42_RS05230 PF00115 Cytochrome C and Quinol oxidase polypeptide I RG42_RS05235 PF06481 COX Aromatic Rich Motif RG42_RS05235 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RG42_RS05240 PF07690 Major Facilitator Superfamily RG42_RS05245 PF08139 Prokaryotic membrane lipoprotein lipid attachment site RG42_RS05245 PF03923 Uncharacterized lipoprotein RG42_RS05255 PF01722 BolA-like protein RG42_RS05265 PF05698 Bacterial trigger factor protein (TF) C-terminus RG42_RS05265 PF05697 Bacterial trigger factor protein (TF) RG42_RS05265 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RG42_RS05270 PF00574 Clp protease RG42_RS05275 PF06689 ClpX C4-type zinc finger RG42_RS05275 PF10431 C-terminal, D2-small domain, of ClpB protein RG42_RS05275 PF07724 AAA domain (Cdc48 subfamily) RG42_RS05280 PF02190 ATP-dependent protease La (LON) substrate-binding domain RG42_RS05280 PF00004 ATPase family associated with various cellular activities (AAA) RG42_RS05280 PF05362 Lon protease (S16) C-terminal proteolytic domain RG42_RS05285 PF00216 Bacterial DNA-binding protein RG42_RS05290 PF13145 PPIC-type PPIASE domain RG42_RS05305 PF06508 Queuosine biosynthesis protein QueC RG42_RS05310 PF12793 Sugar transport-related sRNA regulator N-term RG42_RS05310 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RG42_RS05320 PF13404 AsnC-type helix-turn-helix domain RG42_RS05320 PF01037 Lrp/AsnC ligand binding domain RG42_RS05325 PF00005 ABC transporter RG42_RS05325 PF00664 ABC transporter transmembrane region RG42_RS05330 PF00664 ABC transporter transmembrane region RG42_RS05330 PF00005 ABC transporter RG42_RS05335 PF00543 Nitrogen regulatory protein P-II RG42_RS05340 PF00909 Ammonium Transporter Family RG42_RS05350 PF09619 Type III secretion system lipoprotein chaperone (YscW) RG42_RS05355 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RG42_RS05365 PF07237 Protein of unknown function (DUF1428) RG42_RS05370 PF00563 EAL domain RG42_RS05370 PF12792 CSS motif domain associated with EAL RG42_RS05375 PF10777 Inner membrane protein YlaC RG42_RS05380 PF12464 Maltose acetyltransferase RG42_RS05380 PF14602 Hexapeptide repeat of succinyl-transferase RG42_RS05385 PF05321 Haemolysin expression modulating protein RG42_RS05390 PF10757 Biofilm formation regulator YbaJ RG42_RS05395 PF00873 AcrB/AcrD/AcrF family RG42_RS05400 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RG42_RS05400 PF00529 HlyD membrane-fusion protein of T1SS RG42_RS05405 PF08361 MAATS-type transcriptional repressor, C-terminal region RG42_RS05405 PF00440 Bacterial regulatory proteins, tetR family RG42_RS05415 PF00924 Mechanosensitive ion channel RG42_RS05415 PF12795 Mechanosensitive ion channel porin domain RG42_RS05415 PF12794 Mechanosensitive ion channel inner membrane domain 1 RG42_RS05420 PF10689 Protein of unknown function (DUF2496) RG42_RS05425 PF07445 Primosomal replication protein priC RG42_RS05430 PF04304 Protein of unknown function (DUF454) RG42_RS05440 PF00156 Phosphoribosyl transferase domain RG42_RS05445 PF12169 DNA polymerase III subunits gamma and tau domain III RG42_RS05445 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding RG42_RS05445 PF12170 DNA polymerase III tau subunit V interacting with alpha RG42_RS05450 PF02575 YbaB/EbfC DNA-binding family RG42_RS05455 PF13662 Toprim domain RG42_RS05455 PF02132 RecR protein RG42_RS05460 PF00183 Hsp90 protein RG42_RS05460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG42_RS05465 PF05191 Adenylate kinase, active site lid RG42_RS05470 PF00762 Ferrochelatase RG42_RS05475 PF07859 alpha/beta hydrolase fold RG42_RS05480 PF00294 pfkB family carbohydrate kinase RG42_RS05485 PF00999 Sodium/hydrogen exchanger family RG42_RS05485 PF02254 TrkA-N domain RG42_RS05490 PF07690 Major Facilitator Superfamily RG42_RS05500 PF00149 Calcineurin-like phosphoesterase RG42_RS05500 PF02872 5'-nucleotidase, C-terminal domain RG42_RS05505 PF04073 Aminoacyl-tRNA editing domain RG42_RS05510 PF01963 TraB family RG42_RS05515 PF01381 Helix-turn-helix RG42_RS05525 PF00403 Heavy-metal-associated domain RG42_RS05530 PF04960 Glutaminase RG42_RS05535 PF13520 Amino acid permease RG42_RS05545 PF13411 MerR HTH family regulatory protein RG42_RS05550 PF01957 NfeD-like C-terminal, partner-binding RG42_RS05555 PF01145 SPFH domain / Band 7 family RG42_RS05555 PF16200 C-terminal region of band_7 RG42_RS05560 PF00005 ABC transporter RG42_RS05565 PF03649 Uncharacterised protein family (UPF0014) RG42_RS05570 PF00085 Thioredoxin RG42_RS05575 PF00106 short chain dehydrogenase RG42_RS05580 PF13472 GDSL-like Lipase/Acylhydrolase family RG42_RS05585 PF00005 ABC transporter RG42_RS05595 PF03527 RHS protein RG42_RS05595 PF05593 RHS Repeat RG42_RS05595 PF14220 Domain of unknown function (DUF4329) RG42_RS05600 PF15631 NTF2 fold immunity protein RG42_RS05605 PF03527 RHS protein RG42_RS05630 PF03466 LysR substrate binding domain RG42_RS05630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG42_RS05635 PF04115 Ureidoglycolate lyase RG42_RS05640 PF01614 Bacterial transcriptional regulator RG42_RS05640 PF09339 IclR helix-turn-helix domain RG42_RS05645 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RG42_RS05645 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RG42_RS05645 PF00205 Thiamine pyrophosphate enzyme, central domain RG42_RS05650 PF01261 Xylose isomerase-like TIM barrel RG42_RS05655 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RG42_RS05655 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RG42_RS05660 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin RG42_RS05665 PF01979 Amidohydrolase family RG42_RS05670 PF00860 Permease family RG42_RS05675 PF02595 Glycerate kinase family RG42_RS05680 PF07883 Cupin domain RG42_RS05680 PF05899 Protein of unknown function (DUF861) RG42_RS05685 PF01546 Peptidase family M20/M25/M40 RG42_RS05690 PF02615 Malate/L-lactate dehydrogenase RG42_RS05695 PF02629 CoA binding domain RG42_RS05695 PF00549 CoA-ligase RG42_RS05700 PF06545 Protein of unknown function (DUF1116) RG42_RS05705 PF11392 Protein of unknown function (DUF2877) RG42_RS05710 PF00696 Amino acid kinase family RG42_RS05715 PF02222 ATP-grasp domain RG42_RS05715 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain RG42_RS05720 PF00731 AIR carboxylase RG42_RS05730 PF12850 Calcineurin-like phosphoesterase superfamily domain RG42_RS05735 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RG42_RS05740 PF01406 tRNA synthetases class I (C) catalytic domain RG42_RS05740 PF09190 DALR domain RG42_RS05745 PF04307 LexA-binding, inner membrane-associated putative hydrolase RG42_RS05755 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RG42_RS05755 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RG42_RS05760 PF00419 Fimbrial protein RG42_RS05765 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RG42_RS05765 PF02753 Pili assembly chaperone PapD, C-terminal domain RG42_RS05770 PF13954 PapC N-terminal domain RG42_RS05770 PF00577 Outer membrane usher protein RG42_RS05770 PF13953 PapC C-terminal domain RG42_RS05775 PF00419 Fimbrial protein RG42_RS05780 PF00419 Fimbrial protein RG42_RS05785 PF00196 Bacterial regulatory proteins, luxR family RG42_RS05785 PF00072 Response regulator receiver domain RG42_RS05795 PF12833 Helix-turn-helix domain RG42_RS05805 PF14488 Domain of unknown function (DUF4434) RG42_RS05820 PF00672 HAMP domain RG42_RS05820 PF00512 His Kinase A (phospho-acceptor) domain RG42_RS05820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG42_RS05825 PF00486 Transcriptional regulatory protein, C terminal RG42_RS05825 PF00072 Response regulator receiver domain RG42_RS05835 PF02321 Outer membrane efflux protein RG42_RS05840 PF11604 Copper binding periplasmic protein CusF RG42_RS05845 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RG42_RS05845 PF00529 HlyD membrane-fusion protein of T1SS RG42_RS05850 PF00873 AcrB/AcrD/AcrF family RG42_RS05855 PF00324 Amino acid permease RG42_RS05860 PF00924 Mechanosensitive ion channel RG42_RS05865 PF00881 Nitroreductase family RG42_RS05870 PF04237 YjbR RG42_RS05875 PF06643 Protein of unknown function (DUF1158) RG42_RS05880 PF04107 Glutamate-cysteine ligase family 2(GCS2) RG42_RS05890 PF01848 Hok/gef family RG42_RS05895 PF01609 Transposase DDE domain RG42_RS05900 PF17837 4'-phosphopantetheinyl transferase N-terminal domain RG42_RS05900 PF01648 4'-phosphopantetheinyl transferase superfamily RG42_RS05910 PF07715 TonB-dependent Receptor Plug Domain RG42_RS05910 PF00593 TonB dependent receptor RG42_RS05915 PF11806 Domain of unknown function (DUF3327) RG42_RS05915 PF00756 Putative esterase RG42_RS05920 PF03621 MbtH-like protein RG42_RS05925 PF00668 Condensation domain RG42_RS05925 PF13193 AMP-binding enzyme C-terminal domain RG42_RS05925 PF00975 Thioesterase domain RG42_RS05925 PF00501 AMP-binding enzyme RG42_RS05925 PF00550 Phosphopantetheine attachment site RG42_RS05930 PF02706 Chain length determinant protein RG42_RS05935 PF00005 ABC transporter RG42_RS05940 PF01032 FecCD transport family RG42_RS05945 PF01032 FecCD transport family RG42_RS05950 PF05977 Transmembrane secretion effector RG42_RS05955 PF01497 Periplasmic binding protein RG42_RS05965 PF00425 chorismate binding enzyme RG42_RS05970 PF00501 AMP-binding enzyme RG42_RS05970 PF13193 AMP-binding enzyme C-terminal domain RG42_RS05975 PF00857 Isochorismatase family RG42_RS05975 PF00550 Phosphopantetheine attachment site RG42_RS05985 PF03061 Thioesterase superfamily RG42_RS05990 PF13722 5TM C-terminal transporter carbon starvation CstA RG42_RS05990 PF02554 Carbon starvation protein CstA RG42_RS05995 PF04328 Selenoprotein, putative RG42_RS06000 PF00465 Iron-containing alcohol dehydrogenase RG42_RS06005 PF00155 Aminotransferase class I and II RG42_RS06010 PF02195 ParB-like nuclease domain RG42_RS06015 PF01507 Phosphoadenosine phosphosulfate reductase family RG42_RS06015 PF11922 Domain of unknown function (DUF3440) RG42_RS06020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG42_RS06020 PF03466 LysR substrate binding domain RG42_RS06030 PF13098 Thioredoxin-like domain RG42_RS06035 PF00578 AhpC/TSA family RG42_RS06035 PF10417 C-terminal domain of 1-Cys peroxiredoxin RG42_RS06040 PF13192 Thioredoxin domain RG42_RS06040 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG42_RS06045 PF00582 Universal stress protein family RG42_RS06050 PF00107 Zinc-binding dehydrogenase RG42_RS06050 PF08240 Alcohol dehydrogenase GroES-like domain RG42_RS06050 PF13823 Alcohol dehydrogenase GroES-associated RG42_RS06060 PF01272 Transcription elongation factor, GreA/GreB, C-term RG42_RS06060 PF14760 Rnk N-terminus RG42_RS06070 PF00445 Ribonuclease T2 family RG42_RS06075 PF00939 Sodium:sulfate symporter transmembrane region RG42_RS06080 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase RG42_RS06085 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase RG42_RS06090 PF04223 Citrate lyase, alpha subunit (CitF) RG42_RS06095 PF03328 HpcH/HpaI aldolase/citrate lyase family RG42_RS06100 PF06857 Malonate decarboxylase delta subunit (MdcD) RG42_RS06105 PF08218 Citrate lyase ligase C-terminal domain RG42_RS06110 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain RG42_RS06110 PF17203 Single cache domain 3 RG42_RS06110 PF00989 PAS fold RG42_RS06110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG42_RS06115 PF00072 Response regulator receiver domain RG42_RS06115 PF12431 Transcriptional regulator RG42_RS06120 PF03606 C4-dicarboxylate anaerobic carrier RG42_RS06130 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP RG42_RS06135 PF00313 'Cold-shock' DNA-binding domain RG42_RS06140 PF02537 CrcB-like protein, Camphor Resistance (CrcB) RG42_RS06150 PF00795 Carbon-nitrogen hydrolase RG42_RS06155 PF02416 mttA/Hcf106 family RG42_RS06160 PF04055 Radical SAM superfamily RG42_RS06160 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family RG42_RS06170 PF03466 LysR substrate binding domain RG42_RS06170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG42_RS06180 PF03099 Biotin/lipoate A/B protein ligase family RG42_RS06185 PF04359 Protein of unknown function (DUF493) RG42_RS06190 PF00768 D-alanyl-D-alanine carboxypeptidase RG42_RS06190 PF07943 Penicillin-binding protein 5, C-terminal domain RG42_RS06195 PF05036 Sporulation related domain RG42_RS06195 PF03330 Lytic transglycolase RG42_RS06200 PF01098 Cell cycle protein RG42_RS06205 PF00905 Penicillin binding protein transpeptidase domain RG42_RS06205 PF03717 Penicillin-binding Protein dimerisation domain RG42_RS06210 PF02590 Predicted SPOUT methyltransferase RG42_RS06220 PF00300 Histidine phosphatase superfamily (branch 1) RG42_RS06225 PF01467 Cytidylyltransferase-like RG42_RS06230 PF06144 DNA polymerase III, delta subunit RG42_RS06230 PF14840 Processivity clamp loader gamma complex DNA pol III C-term RG42_RS06235 PF04390 Lipopolysaccharide-assembly RG42_RS06240 PF08264 Anticodon-binding domain of tRNA RG42_RS06240 PF00133 tRNA synthetases class I (I, L, M and V) RG42_RS06240 PF13603 Leucyl-tRNA synthetase, Domain 2 RG42_RS06245 PF07295 Zinc-ribbon containing domain RG42_RS06250 PF08238 Sel1 repeat RG42_RS06255 PF06889 Protein of unknown function (DUF1266) RG42_RS06265 PF01527 Transposase RG42_RS06275 PF00665 Integrase core domain RG42_RS06290 PF00012 Hsp70 protein RG42_RS06295 PF01156 Inosine-uridine preferring nucleoside hydrolase RG42_RS06300 PF00005 ABC transporter RG42_RS06305 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS06310 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS06315 PF00497 Bacterial extracellular solute-binding proteins, family 3 RG42_RS06320 PF00795 Carbon-nitrogen hydrolase RG42_RS06325 PF03471 Transporter associated domain RG42_RS06325 PF00571 CBS domain RG42_RS06330 PF02130 Uncharacterized protein family UPF0054 RG42_RS06335 PF02562 PhoH-like protein RG42_RS06340 PF01938 TRAM domain RG42_RS06340 PF04055 Radical SAM superfamily RG42_RS06340 PF00919 Uncharacterized protein family UPF0004 RG42_RS06345 PF01494 FAD binding domain RG42_RS06395 PF13537 Glutamine amidotransferase domain RG42_RS06395 PF00733 Asparagine synthase RG42_RS06400 PF13344 Haloacid dehalogenase-like hydrolase RG42_RS06405 PF01047 MarR family RG42_RS06405 PF00480 ROK family RG42_RS06410 PF01979 Amidohydrolase family RG42_RS06415 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase RG42_RS06420 PF00367 phosphotransferase system, EIIB RG42_RS06420 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RG42_RS06420 PF02378 Phosphotransferase system, EIIC RG42_RS06425 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain RG42_RS06425 PF00749 tRNA synthetases class I (E and Q), catalytic domain RG42_RS06430 PF03573 outer membrane porin, OprD family RG42_RS06435 PF13982 YbfN-like lipoprotein RG42_RS06440 PF01475 Ferric uptake regulator family RG42_RS06455 PF00258 Flavodoxin RG42_RS06460 PF01402 Ribbon-helix-helix protein, copG family RG42_RS06465 PF12697 Alpha/beta hydrolase family RG42_RS06470 PF17206 SeqA protein N-terminal domain RG42_RS06470 PF03925 SeqA protein C-terminal domain RG42_RS06475 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RG42_RS06475 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RG42_RS06475 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RG42_RS06475 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RG42_RS06485 PF10946 Protein of unknown function DUF2625 RG42_RS06495 PF13520 Amino acid permease RG42_RS06510 PF00072 Response regulator receiver domain RG42_RS06510 PF00486 Transcriptional regulatory protein, C terminal RG42_RS06515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG42_RS06515 PF00512 His Kinase A (phospho-acceptor) domain RG42_RS06515 PF02702 Osmosensitive K+ channel His kinase sensor domain RG42_RS06515 PF13492 GAF domain RG42_RS06515 PF13493 Domain of unknown function (DUF4118) RG42_RS06520 PF02669 K+-transporting ATPase, c chain RG42_RS06530 PF03814 Potassium-transporting ATPase A subunit RG42_RS06535 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) RG42_RS06540 PF10725 Protein of unknown function (DUF2517) RG42_RS06550 PF05593 RHS Repeat RG42_RS06550 PF03527 RHS protein RG42_RS06550 PF15606 Bacterial toxin 34 RG42_RS06565 PF03527 RHS protein RG42_RS06565 PF05593 RHS Repeat RG42_RS06585 PF13808 DDE_Tnp_1-associated RG42_RS06590 PF13808 DDE_Tnp_1-associated RG42_RS06590 PF01609 Transposase DDE domain RG42_RS06595 PF13808 DDE_Tnp_1-associated RG42_RS06595 PF01609 Transposase DDE domain RG42_RS06600 PF08349 Protein of unknown function (DUF1722) RG42_RS06605 PF03441 FAD binding domain of DNA photolyase RG42_RS06605 PF00875 DNA photolyase RG42_RS06610 PF00854 POT family RG42_RS06615 PF01784 NIF3 (NGG1p interacting factor 3) RG42_RS06620 PF02682 Carboxyltransferase domain, subdomain C and D RG42_RS06625 PF02626 Carboxyltransferase domain, subdomain A and B RG42_RS06630 PF03746 LamB/YcsF family RG42_RS06635 PF06827 Zinc finger found in FPG and IleRS RG42_RS06635 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain RG42_RS06635 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain RG42_RS06640 PF05145 Transition state regulatory protein AbrB RG42_RS06645 PF00419 Fimbrial protein RG42_RS06650 PF02753 Pili assembly chaperone PapD, C-terminal domain RG42_RS06650 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RG42_RS06655 PF13953 PapC C-terminal domain RG42_RS06655 PF00577 Outer membrane usher protein RG42_RS06655 PF13954 PapC N-terminal domain RG42_RS06660 PF00419 Fimbrial protein RG42_RS06665 PF00285 Citrate synthase, C-terminal domain RG42_RS06685 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RG42_RS06690 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RG42_RS06695 PF00890 FAD binding domain RG42_RS06695 PF02910 Fumarate reductase flavoprotein C-term RG42_RS06700 PF13085 2Fe-2S iron-sulfur cluster binding domain RG42_RS06710 PF16078 2-oxoglutarate dehydrogenase N-terminus RG42_RS06710 PF00676 Dehydrogenase E1 component RG42_RS06710 PF16870 2-oxoglutarate dehydrogenase C-terminal RG42_RS06710 PF02779 Transketolase, pyrimidine binding domain RG42_RS06715 PF02817 e3 binding domain RG42_RS06715 PF00364 Biotin-requiring enzyme RG42_RS06715 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RG42_RS06720 PF08442 ATP-grasp domain RG42_RS06720 PF00549 CoA-ligase RG42_RS06725 PF02629 CoA binding domain RG42_RS06725 PF00549 CoA-ligase RG42_RS06730 PF00392 Bacterial regulatory proteins, gntR family RG42_RS06730 PF07702 UTRA domain RG42_RS06735 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RG42_RS06735 PF02378 Phosphotransferase system, EIIC RG42_RS06735 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RG42_RS06740 PF09261 Alpha mannosidase middle domain RG42_RS06740 PF07748 Glycosyl hydrolases family 38 C-terminal domain RG42_RS06740 PF01074 Glycosyl hydrolases family 38 N-terminal domain RG42_RS06750 PF01654 Cytochrome bd terminal oxidase subunit I RG42_RS06755 PF02322 Cytochrome bd terminal oxidase subunit II RG42_RS06760 PF08173 Membrane bound YbgT-like protein RG42_RS06765 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) RG42_RS06770 PF03061 Thioesterase superfamily RG42_RS06775 PF01618 MotA/TolQ/ExbB proton channel family RG42_RS06780 PF02472 Biopolymer transport protein ExbD/TolR RG42_RS06785 PF06519 TolA C-terminal RG42_RS06790 PF07676 WD40-like Beta Propeller Repeat RG42_RS06790 PF04052 TolB amino-terminal domain RG42_RS06795 PF00691 OmpA family RG42_RS06800 PF16331 TolA binding protein trimerisation RG42_RS06800 PF13174 Tetratricopeptide repeat RG42_RS06845 PF02445 Quinolinate synthetase A protein RG42_RS06850 PF04973 Nicotinamide mononucleotide transporter RG42_RS06855 PF01545 Cation efflux family RG42_RS06860 PF13985 YbgS-like protein RG42_RS06870 PF00793 DAHP synthetase I family RG42_RS06875 PF00300 Histidine phosphatase superfamily (branch 1) RG42_RS06880 PF01263 Aldose 1-epimerase RG42_RS06885 PF08544 GHMP kinases C terminal RG42_RS06885 PF00288 GHMP kinases N terminal domain RG42_RS06885 PF10509 Galactokinase galactose-binding signature RG42_RS06890 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain RG42_RS06890 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain RG42_RS06895 PF16363 GDP-mannose 4,6 dehydratase RG42_RS06900 PF00005 ABC transporter RG42_RS06905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG42_RS06905 PF03459 TOBE domain RG42_RS06910 PF10766 Multidrug efflux pump-associated protein AcrZ RG42_RS06925 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS06930 PF00005 ABC transporter RG42_RS06930 PF03459 TOBE domain RG42_RS06940 PF10282 Lactonase, 7-bladed beta-propeller RG42_RS06945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG42_RS06945 PF03466 LysR substrate binding domain RG42_RS06950 PF04303 PrpF protein RG42_RS06955 PF00939 Sodium:sulfate symporter transmembrane region RG42_RS06960 PF00330 Aconitase family (aconitate hydratase) RG42_RS06960 PF00694 Aconitase C-terminal domain RG42_RS06965 PF01095 Pectinesterase RG42_RS06975 PF00665 Integrase core domain RG42_RS07020 PF07102 Protein of unknown function (DUF1364) RG42_RS07025 PF05866 Endodeoxyribonuclease RusA RG42_RS07035 PF06530 Phage antitermination protein Q RG42_RS07040 PF00267 Gram-negative porin RG42_RS07050 PF04971 Bacteriophage P21 holin S RG42_RS07055 PF00959 Phage lysozyme RG42_RS07060 PF03245 Bacteriophage Rz lysis protein RG42_RS07070 PF09669 Phage regulatory protein Rha (Phage_pRha) RG42_RS07070 PF10549 ORF11CD3 domain RG42_RS07075 PF07166 Protein of unknown function (DUF1398) RG42_RS07080 PF13132 Domain of unknown function (DUF3950) RG42_RS07085 PF07471 Phage DNA packaging protein Nu1 RG42_RS07090 PF02413 Caudovirales tail fibre assembly protein, lambda gpK RG42_RS07095 PF02831 gpW RG42_RS07105 PF01957 NfeD-like C-terminal, partner-binding RG42_RS07105 PF01972 Serine dehydrogenase proteinase RG42_RS07115 PF03864 Phage major capsid protein E RG42_RS07155 PF06791 Prophage tail length tape measure protein RG42_RS07185 PF06316 Enterobacterial Ail/Lom protein RG42_RS07190 PF07484 Phage Tail Collar Domain RG42_RS07190 PF03335 Phage tail fibre repeat RG42_RS07195 PF02413 Caudovirales tail fibre assembly protein, lambda gpK RG42_RS07200 PF00990 Diguanylate cyclase, GGDEF domain RG42_RS07200 PF17158 Membrane-associated sensor, integral membrane domain RG42_RS07210 PF01161 Phosphatidylethanolamine-binding protein RG42_RS07215 PF00202 Aminotransferase class-III RG42_RS07220 PF06968 Biotin and Thiamin Synthesis associated domain RG42_RS07220 PF04055 Radical SAM superfamily RG42_RS07225 PF00155 Aminotransferase class I and II RG42_RS07230 PF08241 Methyltransferase domain RG42_RS07240 PF17757 UvrB interaction domain RG42_RS07240 PF12344 Ultra-violet resistance protein B RG42_RS07240 PF02151 UvrB/uvrC motif RG42_RS07240 PF04851 Type III restriction enzyme, res subunit RG42_RS07240 PF00271 Helicase conserved C-terminal domain RG42_RS07245 PF01933 Uncharacterised protein family UPF0052 RG42_RS07250 PF04055 Radical SAM superfamily RG42_RS07250 PF06463 Molybdenum Cofactor Synthesis C RG42_RS07255 PF00994 Probable molybdopterin binding domain RG42_RS07260 PF01967 MoaC family RG42_RS07265 PF02597 ThiS family RG42_RS07270 PF02391 MoaE protein RG42_RS07275 PF01027 Inhibitor of apoptosis-promoting Bax1 RG42_RS07280 PF01027 Inhibitor of apoptosis-promoting Bax1 RG42_RS07285 PF03706 Lysylphosphatidylglycerol synthase TM region RG42_RS07290 PF13091 PLD-like domain RG42_RS07295 PF03372 Endonuclease/Exonuclease/phosphatase family RG42_RS07300 PF11076 Putative inner membrane protein YbhQ RG42_RS07315 PF00005 ABC transporter RG42_RS07320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RG42_RS07325 PF00440 Bacterial regulatory proteins, tetR family RG42_RS07325 PF09209 Tetracyclin repressor-like, C-terminal domain RG42_RS07330 PF00271 Helicase conserved C-terminal domain RG42_RS07330 PF00270 DEAD/DEAH box helicase RG42_RS07335 PF08719 Domain of unknown function (DUF1768) RG42_RS07345 PF00270 DEAD/DEAH box helicase RG42_RS07345 PF06733 DEAD_2 RG42_RS07345 PF13307 Helicase C-terminal domain RG42_RS07350 PF02885 Glycosyl transferase family, helical bundle domain RG42_RS07355 PF02615 Malate/L-lactate dehydrogenase RG42_RS07360 PF07338 Protein of unknown function (DUF1471) RG42_RS07365 PF01258 Prokaryotic dksA/traR C4-type zinc finger RG42_RS07370 PF18331 PKHD-type hydroxylase C-terminal domain RG42_RS07370 PF13640 2OG-Fe(II) oxygenase superfamily RG42_RS07375 PF07715 TonB-dependent Receptor Plug Domain RG42_RS07375 PF00593 TonB dependent receptor RG42_RS07380 PF07338 Protein of unknown function (DUF1471) RG42_RS07385 PF05971 RNA methyltransferase RG42_RS07390 PF00924 Mechanosensitive ion channel RG42_RS07400 PF00005 ABC transporter RG42_RS07405 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS07410 PF00497 Bacterial extracellular solute-binding proteins, family 3 RG42_RS07425 PF00210 Ferritin-like domain RG42_RS07435 PF00892 EamA-like transporter family RG42_RS07440 PF13505 Outer membrane protein beta-barrel domain RG42_RS07445 PF00884 Sulfatase RG42_RS07455 PF02742 Iron dependent repressor, metal binding and dimerisation domain RG42_RS07455 PF01325 Iron dependent repressor, N-terminal DNA binding domain RG42_RS07460 PF03600 Citrate transporter RG42_RS07465 PF17969 L,D-transpeptidase C-terminal domain RG42_RS07465 PF03734 L,D-transpeptidase catalytic domain RG42_RS07470 PF12848 ABC transporter RG42_RS07470 PF00005 ABC transporter RG42_RS07475 PF07350 Protein of unknown function (DUF1479) RG42_RS07485 PF02901 Pyruvate formate lyase-like RG42_RS07485 PF01228 Glycine radical RG42_RS07490 PF04055 Radical SAM superfamily RG42_RS07495 PF00923 Transaldolase/Fructose-6-phosphate aldolase RG42_RS07500 PF00899 ThiF family RG42_RS07505 PF00994 Probable molybdopterin binding domain RG42_RS07505 PF03454 MoeA C-terminal region (domain IV) RG42_RS07505 PF03453 MoeA N-terminal region (domain I and II) RG42_RS07510 PF01112 Asparaginase RG42_RS07515 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RG42_RS07515 PF00005 ABC transporter RG42_RS07520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RG42_RS07525 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS07530 PF12911 N-terminal TM domain of oligopeptide transport permease C RG42_RS07530 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS07535 PF00563 EAL domain RG42_RS07535 PF17153 Periplasmic sensor domain, extracellular RG42_RS07540 PF17156 Gammaproteobacterial periplasmic sensor domain RG42_RS07540 PF00990 Diguanylate cyclase, GGDEF domain RG42_RS07545 PF00919 Uncharacterized protein family UPF0004 RG42_RS07545 PF18693 TRAM domain RG42_RS07545 PF04055 Radical SAM superfamily RG42_RS07550 PF10799 Biofilm formation protein (YliH/bssR) RG42_RS07555 PF07995 Glucose / Sorbosone dehydrogenase RG42_RS07560 PF00043 Glutathione S-transferase, C-terminal domain RG42_RS07560 PF13417 Glutathione S-transferase, N-terminal domain RG42_RS07565 PF00768 D-alanyl-D-alanine carboxypeptidase RG42_RS07565 PF07943 Penicillin-binding protein 5, C-terminal domain RG42_RS07570 PF08220 DeoR-like helix-turn-helix domain RG42_RS07570 PF00455 DeoR C terminal sensor domain RG42_RS07575 PF01569 PAP2 superfamily RG42_RS07580 PF07690 Major Facilitator Superfamily RG42_RS07595 PF07690 Major Facilitator Superfamily RG42_RS07600 PF00440 Bacterial regulatory proteins, tetR family RG42_RS07605 PF00589 Phage integrase family RG42_RS07605 PF02899 Phage integrase, N-terminal SAM-like domain RG42_RS07615 PF07022 Bacteriophage CI repressor helix-turn-helix domain RG42_RS07615 PF16452 Bacteriophage CI repressor C-terminal domain RG42_RS07625 PF06892 Phage regulatory protein CII (CP76) RG42_RS07635 PF17282 Family of unknown function (DUF5347) RG42_RS07645 PF01258 Prokaryotic dksA/traR C4-type zinc finger RG42_RS07650 PF02086 D12 class N6 adenine-specific DNA methyltransferase RG42_RS07660 PF05840 Bacteriophage replication gene A protein (GPA) RG42_RS07670 PF06183 DinI-like family RG42_RS07785 PF02413 Caudovirales tail fibre assembly protein, lambda gpK RG42_RS07790 PF02413 Caudovirales tail fibre assembly protein, lambda gpK RG42_RS07800 PF02796 Helix-turn-helix domain of resolvase RG42_RS07800 PF00239 Resolvase, N terminal domain RG42_RS07805 PF04984 Phage tail sheath protein subtilisin-like domain RG42_RS07805 PF17482 Phage tail sheath C-terminal domain RG42_RS07840 PF04606 Ogr/Delta-like zinc finger RG42_RS07845 PF02080 TrkA-C domain RG42_RS07845 PF06826 Predicted Permease Membrane Region RG42_RS07850 PF11045 Putative inner membrane protein of Enterobacteriaceae RG42_RS07855 PF00462 Glutaredoxin RG42_RS07860 PF07214 Protein of unknown function (DUF1418) RG42_RS07865 PF00881 Nitroreductase family RG42_RS07870 PF18030 RimK PreATP-grasp domain RG42_RS07870 PF08443 RimK-like ATP-grasp domain RG42_RS07875 PF10722 Putative bacterial sensory transduction regulator RG42_RS07885 PF13416 Bacterial extracellular solute-binding protein RG42_RS07890 PF00005 ABC transporter RG42_RS07890 PF08402 TOBE domain RG42_RS07895 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS07900 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS07905 PF10767 Protein of unknown function (DUF2593) RG42_RS07910 PF05958 tRNA (Uracil-5-)-methyltransferase RG42_RS07920 PF00497 Bacterial extracellular solute-binding proteins, family 3 RG42_RS07925 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS07930 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS07935 PF00497 Bacterial extracellular solute-binding proteins, family 3 RG42_RS07940 PF00005 ABC transporter RG42_RS07945 PF12883 Protein of unknown function (DUF3828) RG42_RS07950 PF01906 Putative heavy-metal-binding RG42_RS07955 PF01510 N-acetylmuramoyl-L-alanine amidase RG42_RS07960 PF01370 NAD dependent epimerase/dehydratase family RG42_RS07965 PF11066 Protein of unknown function (DUF2867) RG42_RS07965 PF13460 NAD(P)H-binding RG42_RS07970 PF01212 Beta-eliminating lyase RG42_RS07975 PF00205 Thiamine pyrophosphate enzyme, central domain RG42_RS07975 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RG42_RS07975 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RG42_RS07980 PF00111 2Fe-2S iron-sulfur cluster binding domain RG42_RS07980 PF00970 Oxidoreductase FAD-binding domain RG42_RS07980 PF00175 Oxidoreductase NAD-binding domain RG42_RS07985 PF03063 Prismane/CO dehydrogenase family RG42_RS07990 PF03956 Lysine exporter LysO RG42_RS07995 PF00230 Major intrinsic protein RG42_RS08005 PF11398 Protein of unknown function (DUF2813) RG42_RS08010 PF04393 Protein of unknown function (DUF535) RG42_RS08015 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RG42_RS08020 PF12704 MacB-like periplasmic core domain RG42_RS08020 PF00005 ABC transporter RG42_RS08020 PF02687 FtsX-like permease family RG42_RS08025 PF00313 'Cold-shock' DNA-binding domain RG42_RS08030 PF02617 ATP-dependent Clp protease adaptor protein ClpS RG42_RS08035 PF07724 AAA domain (Cdc48 subfamily) RG42_RS08035 PF00004 ATPase family associated with various cellular activities (AAA) RG42_RS08035 PF17871 AAA lid domain RG42_RS08035 PF02861 Clp amino terminal domain, pathogenicity island component RG42_RS08035 PF10431 C-terminal, D2-small domain, of ClpB protein RG42_RS08050 PF01176 Translation initiation factor 1A / IF-1 RG42_RS08060 PF03588 Leucyl/phenylalanyl-tRNA protein transferase RG42_RS08065 PF00664 ABC transporter transmembrane region RG42_RS08065 PF00005 ABC transporter RG42_RS08070 PF00664 ABC transporter transmembrane region RG42_RS08070 PF00005 ABC transporter RG42_RS08075 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG42_RS08085 PF01037 Lrp/AsnC ligand binding domain RG42_RS08090 PF17854 FtsK alpha domain RG42_RS08090 PF13491 4TM region of DNA translocase FtsK/SpoIIIE RG42_RS08090 PF09397 Ftsk gamma domain RG42_RS08090 PF01580 FtsK/SpoIIIE family RG42_RS08095 PF03548 Outer membrane lipoprotein carrier protein LolA RG42_RS08100 PF12002 MgsA AAA+ ATPase C terminal RG42_RS08100 PF16193 AAA C-terminal domain RG42_RS08100 PF00004 ATPase family associated with various cellular activities (AAA) RG42_RS08105 PF02403 Seryl-tRNA synthetase N-terminal domain RG42_RS08105 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RG42_RS08110 PF00384 Molybdopterin oxidoreductase RG42_RS08110 PF01568 Molydopterin dinucleotide binding domain RG42_RS08110 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RG42_RS08115 PF12800 4Fe-4S binding domain RG42_RS08115 PF13247 4Fe-4S dicluster domain RG42_RS08120 PF04976 DMSO reductase anchor subunit (DmsC) RG42_RS08125 PF00857 Isochorismatase family RG42_RS08130 PF07690 Major Facilitator Superfamily RG42_RS08135 PF13520 Amino acid permease RG42_RS08140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG42_RS08140 PF03466 LysR substrate binding domain RG42_RS08145 PF02525 Flavodoxin-like fold RG42_RS08150 PF04055 Radical SAM superfamily RG42_RS08160 PF18381 YcaO cyclodehydratase C-terminal domain RG42_RS08160 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding RG42_RS08165 PF04239 Protein of unknown function (DUF421) RG42_RS08170 PF00266 Aminotransferase class-V RG42_RS08175 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RG42_RS08180 PF01435 Peptidase family M48 RG42_RS08185 PF02224 Cytidylate kinase RG42_RS08190 PF00575 S1 RNA binding domain RG42_RS08195 PF00216 Bacterial DNA-binding protein RG42_RS08205 PF00664 ABC transporter transmembrane region RG42_RS08205 PF00005 ABC transporter RG42_RS08210 PF02606 Tetraacyldisaccharide-1-P 4'-kinase RG42_RS08215 PF06224 Winged helix DNA-binding domain RG42_RS08220 PF03966 Trm112p-like protein RG42_RS08225 PF02348 Cytidylyltransferase RG42_RS08230 PF01636 Phosphotransferase enzyme family RG42_RS08235 PF02698 DUF218 domain RG42_RS08240 PF13847 Methyltransferase domain RG42_RS08245 PF03882 MukF winged-helix domain RG42_RS08245 PF17193 MukF C-terminal domain RG42_RS08245 PF17192 MukF middle domain RG42_RS08250 PF04288 MukE-like family RG42_RS08255 PF04310 MukB N-terminal RG42_RS08255 PF16330 MukB hinge domain RG42_RS08260 PF03734 L,D-transpeptidase catalytic domain RG42_RS08260 PF01471 Putative peptidoglycan binding domain RG42_RS08270 PF05951 Bacterial protein of unknown function (DUF882) RG42_RS08275 PF00753 Metallo-beta-lactamase superfamily RG42_RS08280 PF00155 Aminotransferase class I and II RG42_RS08290 PF00267 Gram-negative porin RG42_RS08295 PF00152 tRNA synthetases class II (D, K and N) RG42_RS08295 PF01336 OB-fold nucleic acid binding domain RG42_RS08300 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain RG42_RS08300 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family RG42_RS08305 PF01433 Peptidase family M1 domain RG42_RS08305 PF17432 Domain of unknown function (DUF3458_C) ARM repeats RG42_RS08305 PF11940 Domain of unknown function (DUF3458) Ig-like fold RG42_RS08310 PF00005 ABC transporter RG42_RS08315 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS08320 PF00296 Luciferase-like monooxygenase RG42_RS08325 PF09084 NMT1/THI5 like RG42_RS08330 PF03358 NADPH-dependent FMN reductase RG42_RS08340 PF00419 Fimbrial protein RG42_RS08345 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RG42_RS08345 PF02753 Pili assembly chaperone PapD, C-terminal domain RG42_RS08350 PF00577 Outer membrane usher protein RG42_RS08350 PF13954 PapC N-terminal domain RG42_RS08350 PF13953 PapC C-terminal domain RG42_RS08355 PF00419 Fimbrial protein RG42_RS08360 PF00419 Fimbrial protein RG42_RS08365 PF00419 Fimbrial protein RG42_RS08370 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RG42_RS08370 PF02753 Pili assembly chaperone PapD, C-terminal domain RG42_RS08375 PF01180 Dihydroorotate dehydrogenase RG42_RS08380 PF07126 Cell-division protein ZapC RG42_RS08385 PF00111 2Fe-2S iron-sulfur cluster binding domain RG42_RS08385 PF03473 MOSC domain RG42_RS08385 PF03476 MOSC N-terminal beta barrel domain RG42_RS08390 PF02926 THUMP domain RG42_RS08390 PF10672 S-adenosylmethionine-dependent methyltransferase RG42_RS08390 PF01170 Putative RNA methylase family UPF0020 RG42_RS08395 PF16326 ABC transporter C-terminal domain RG42_RS08395 PF12848 ABC transporter RG42_RS08395 PF00005 ABC transporter RG42_RS08400 PF04403 Paraquat-inducible protein A RG42_RS08405 PF02470 MlaD protein RG42_RS08410 PF03886 ABC-type transport auxiliary lipoprotein component RG42_RS08415 PF04957 Ribosome modulation factor RG42_RS08420 PF07977 FabA-like domain RG42_RS08425 PF05362 Lon protease (S16) C-terminal proteolytic domain RG42_RS08425 PF13654 AAA domain RG42_RS08430 PF06303 MatP N-terminal domain RG42_RS08430 PF17414 MatP C-terminal ribbon-helix-helix domain RG42_RS08435 PF01389 OmpA-like transmembrane domain RG42_RS08435 PF00691 OmpA family RG42_RS08445 PF03846 Cell division inhibitor SulA RG42_RS08450 PF04993 TfoX N-terminal domain RG42_RS08450 PF04994 TfoX C-terminal domain RG42_RS08455 PF12805 FUSC-like inner membrane protein yccS RG42_RS08460 PF03733 Inner membrane component domain RG42_RS08465 PF13361 UvrD-like helicase C-terminal domain RG42_RS08465 PF12462 DNA helicase IV / RNA helicase N terminal RG42_RS08465 PF00580 UvrD/REP helicase N-terminal domain RG42_RS08470 PF02142 MGS-like domain RG42_RS08475 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) RG42_RS08485 PF13380 CoA binding domain RG42_RS08490 PF08755 Hemimethylated DNA-binding protein YccV like RG42_RS08495 PF17785 PUA-like domain RG42_RS08495 PF10672 S-adenosylmethionine-dependent methyltransferase RG42_RS08500 PF00708 Acylphosphatase RG42_RS08505 PF04358 DsrC like protein RG42_RS08510 PF01027 Inhibitor of apoptosis-promoting Bax1 RG42_RS08520 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RG42_RS08520 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal RG42_RS08525 PF00374 Nickel-dependent hydrogenase RG42_RS08530 PF01292 Prokaryotic cytochrome b561 RG42_RS08535 PF01750 Hydrogenase maturation protease RG42_RS08540 PF07449 Hydrogenase-1 expression protein HyaE RG42_RS08545 PF04809 HupH hydrogenase expression protein, C-terminal conserved region RG42_RS08550 PF01654 Cytochrome bd terminal oxidase subunit I RG42_RS08555 PF02322 Cytochrome bd terminal oxidase subunit II RG42_RS08560 PF08173 Membrane bound YbgT-like protein RG42_RS08565 PF00328 Histidine phosphatase superfamily (branch 2) RG42_RS08575 PF01451 Low molecular weight phosphotyrosine protein phosphatase RG42_RS08580 PF02563 Polysaccharide biosynthesis/export protein RG42_RS08580 PF10531 SLBB domain RG42_RS08580 PF18412 Outer-membrane lipoprotein Wza C-terminal domain RG42_RS08585 PF06082 Exopolysaccharide biosynthesis protein YbjH RG42_RS08590 PF06251 Capsule biosynthesis GfcC RG42_RS08595 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF RG42_RS08605 PF00313 'Cold-shock' DNA-binding domain RG42_RS08610 PF00313 'Cold-shock' DNA-binding domain RG42_RS08620 PF15939 Putative antitoxin of bacterial toxin-antitoxin system RG42_RS08625 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system RG42_RS08630 PF12801 4Fe-4S binding domain RG42_RS08635 PF00672 HAMP domain RG42_RS08635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG42_RS08635 PF00512 His Kinase A (phospho-acceptor) domain RG42_RS08635 PF01627 Hpt domain RG42_RS08635 PF00072 Response regulator receiver domain RG42_RS08640 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RG42_RS08645 PF00486 Transcriptional regulatory protein, C terminal RG42_RS08645 PF00072 Response regulator receiver domain RG42_RS08650 PF03264 NapC/NirT cytochrome c family, N-terminal region RG42_RS08655 PF00384 Molybdopterin oxidoreductase RG42_RS08655 PF01568 Molydopterin dinucleotide binding domain RG42_RS08655 PF18364 Molybdopterin oxidoreductase N-terminal domain RG42_RS08660 PF02613 Nitrate reductase delta subunit RG42_RS08670 PF00226 DnaJ domain RG42_RS08670 PF01556 DnaJ C terminal domain RG42_RS08680 PF00328 Histidine phosphatase superfamily (branch 2) RG42_RS08685 PF13993 YccJ-like protein RG42_RS08690 PF03358 NADPH-dependent FMN reductase RG42_RS08700 PF10685 Stress-induced bacterial acidophilic repeat motif RG42_RS08710 PF00860 Permease family RG42_RS08715 PF01613 Flavin reductase like domain RG42_RS08720 PF00881 Nitroreductase family RG42_RS08725 PF12697 Alpha/beta hydrolase family RG42_RS08730 PF01042 Endoribonuclease L-PSP RG42_RS08735 PF00857 Isochorismatase family RG42_RS08740 PF00296 Luciferase-like monooxygenase RG42_RS08745 PF08362 YcdC-like protein, C-terminal region RG42_RS08745 PF00440 Bacterial regulatory proteins, tetR family RG42_RS08750 PF00171 Aldehyde dehydrogenase family RG42_RS08750 PF18327 Proline utilization A proline dehydrogenase N-terminal domain RG42_RS08750 PF01619 Proline dehydrogenase RG42_RS08750 PF14850 DNA-binding domain of Proline dehydrogenase RG42_RS08765 PF00474 Sodium:solute symporter family RG42_RS08775 PF03239 Iron permease FTR1 family RG42_RS08780 PF13473 Cupredoxin-like domain RG42_RS08780 PF09375 Imelysin RG42_RS08785 PF04261 Dyp-type peroxidase family RG42_RS08795 PF02562 PhoH-like protein RG42_RS08800 PF13994 PgaD-like protein RG42_RS08805 PF00535 Glycosyl transferase family 2 RG42_RS08810 PF14883 Hypothetical glycosyl hydrolase family 13 RG42_RS08810 PF01522 Polysaccharide deacetylase RG42_RS08820 PF00990 Diguanylate cyclase, GGDEF domain RG42_RS08820 PF17158 Membrane-associated sensor, integral membrane domain RG42_RS08825 PF13333 Integrase core domain RG42_RS08825 PF00665 Integrase core domain RG42_RS08825 PF13276 HTH-like domain RG42_RS08830 PF01527 Transposase RG42_RS08850 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RG42_RS08855 PF02811 PHP domain RG42_RS08860 PF02613 Nitrate reductase delta subunit RG42_RS08865 PF06496 Protein of unknown function (DUF1097) RG42_RS08870 PF03783 Curli production assembly/transport component CsgG RG42_RS08875 PF10614 Type VIII secretion system (T8SS), CsgF protein RG42_RS08880 PF10627 Curli assembly protein CsgE RG42_RS08885 PF00196 Bacterial regulatory proteins, luxR family RG42_RS08900 PF07012 Curlin associated repeat RG42_RS08905 PF07012 Curlin associated repeat RG42_RS08910 PF10610 Thin aggregative fimbriae synthesis protein RG42_RS08920 PF01661 Macro domain RG42_RS08925 PF13091 PLD-like domain RG42_RS08930 PF01757 Acyltransferase family RG42_RS08935 PF04349 Periplasmic glucan biosynthesis protein, MdoG RG42_RS08940 PF00535 Glycosyl transferase family 2 RG42_RS08945 PF07119 Protein of unknown function (DUF1375) RG42_RS08950 PF13984 MsyB protein RG42_RS08960 PF07690 Major Facilitator Superfamily RG42_RS08965 PF03279 Bacterial lipid A biosynthesis acyltransferase RG42_RS08970 PF00581 Rhodanese-like domain RG42_RS08970 PF17773 UPF0176 acylphosphatase like domain RG42_RS08970 PF12368 Rhodanase C-terminal RG42_RS08975 PF04264 YceI-like domain RG42_RS08980 PF01292 Prokaryotic cytochrome b561 RG42_RS08990 PF10968 Protein of unknown function (DUF2770) RG42_RS08995 PF01266 FAD dependent oxidoreductase RG42_RS09000 PF13991 BssS protein family RG42_RS09005 PF06183 DinI-like family RG42_RS09010 PF01979 Amidohydrolase family RG42_RS09015 PF07273 Protein of unknown function (DUF1439) RG42_RS09020 PF04399 Glutaredoxin 2, C terminal domain RG42_RS09020 PF13417 Glutathione S-transferase, N-terminal domain RG42_RS09025 PF07690 Major Facilitator Superfamily RG42_RS09030 PF13302 Acetyltransferase (GNAT) domain RG42_RS09035 PF04337 Protein of unknown function, DUF480 RG42_RS09040 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RG42_RS09045 PF03023 Lipid II flippase MurJ RG42_RS09050 PF05130 FlgN protein RG42_RS09055 PF04316 Anti-sigma-28 factor, FlgM RG42_RS09060 PF13144 Chaperone for flagella basal body P-ring formation RG42_RS09065 PF00460 Flagella basal body rod protein RG42_RS09070 PF00460 Flagella basal body rod protein RG42_RS09070 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RG42_RS09075 PF13861 FlgD Tudor-like domain RG42_RS09075 PF03963 Flagellar hook capping protein - N-terminal region RG42_RS09075 PF13860 FlgD Ig-like domain RG42_RS09080 PF00460 Flagella basal body rod protein RG42_RS09080 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RG42_RS09080 PF07559 Flagellar basal body protein FlaE RG42_RS09085 PF00460 Flagella basal body rod protein RG42_RS09085 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RG42_RS09090 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RG42_RS09090 PF00460 Flagella basal body rod protein RG42_RS09095 PF02107 Flagellar L-ring protein RG42_RS09100 PF02119 Flagellar P-ring protein RG42_RS09105 PF10135 Rod binding protein RG42_RS09105 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase RG42_RS09110 PF00460 Flagella basal body rod protein RG42_RS09110 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RG42_RS09115 PF00669 Bacterial flagellin N-terminal helical region RG42_RS09120 PF10150 Ribonuclease E/G family RG42_RS09120 PF12111 Polyribonucleotide phosphorylase C terminal RG42_RS09120 PF00575 S1 RNA binding domain RG42_RS09130 PF01479 S4 domain RG42_RS09130 PF00849 RNA pseudouridylate synthase RG42_RS09135 PF02545 Maf-like protein RG42_RS09140 PF02620 Large ribosomal RNA subunit accumulation protein YceD RG42_RS09145 PF01783 Ribosomal L32p protein family RG42_RS09150 PF02504 Fatty acid synthesis protein RG42_RS09155 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RG42_RS09155 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RG42_RS09160 PF00698 Acyl transferase domain RG42_RS09170 PF00550 Phosphopantetheine attachment site RG42_RS09175 PF02801 Beta-ketoacyl synthase, C-terminal domain RG42_RS09175 PF00109 Beta-ketoacyl synthase, N-terminal domain RG42_RS09180 PF01063 Amino-transferase class IV RG42_RS09185 PF02618 YceG-like family RG42_RS09190 PF02223 Thymidylate kinase RG42_RS09195 PF09115 DNA polymerase III, delta subunit, C terminal RG42_RS09200 PF01026 TatD related DNase RG42_RS09205 PF02378 Phosphotransferase system, EIIC RG42_RS09205 PF00367 phosphotransferase system, EIIB RG42_RS09210 PF00593 TonB dependent receptor RG42_RS09210 PF07715 TonB-dependent Receptor Plug Domain RG42_RS09215 PF01230 HIT domain RG42_RS09220 PF07233 Protein of unknown function (DUF1425) RG42_RS09225 PF13036 Peptidoglycan-synthase activator LpoB RG42_RS09230 PF01636 Phosphotransferase enzyme family RG42_RS09235 PF00933 Glycosyl hydrolase family 3 N terminal domain RG42_RS09240 PF05728 Uncharacterised protein family (UPF0227) RG42_RS09250 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG42_RS09260 PF05433 Glycine zipper 2TM domain RG42_RS09265 PF00440 Bacterial regulatory proteins, tetR family RG42_RS09270 PF07338 Protein of unknown function (DUF1471) RG42_RS09275 PF01476 LysM domain RG42_RS09275 PF17969 L,D-transpeptidase C-terminal domain RG42_RS09275 PF03734 L,D-transpeptidase catalytic domain RG42_RS09280 PF00270 DEAD/DEAH box helicase RG42_RS09280 PF00271 Helicase conserved C-terminal domain RG42_RS09280 PF02559 CarD-like/TRCF domain RG42_RS09280 PF03461 TRCF domain RG42_RS09280 PF17757 UvrB interaction domain RG42_RS09285 PF01757 Acyltransferase family RG42_RS09290 PF02687 FtsX-like permease family RG42_RS09290 PF12704 MacB-like periplasmic core domain RG42_RS09295 PF00005 ABC transporter RG42_RS09300 PF12704 MacB-like periplasmic core domain RG42_RS09300 PF02687 FtsX-like permease family RG42_RS09305 PF00480 ROK family RG42_RS09310 PF02146 Sir2 family RG42_RS09315 PF04536 TPM domain RG42_RS09320 PF12158 Protein of unknown function (DUF3592) RG42_RS09325 PF13416 Bacterial extracellular solute-binding protein RG42_RS09330 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS09335 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS09340 PF08402 TOBE domain RG42_RS09340 PF00005 ABC transporter RG42_RS09350 PF07687 Peptidase dimerisation domain RG42_RS09350 PF01546 Peptidase family M20/M25/M40 RG42_RS09355 PF08007 Cupin superfamily protein RG42_RS09360 PF08918 PhoQ Sensor RG42_RS09360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG42_RS09365 PF00072 Response regulator receiver domain RG42_RS09365 PF00486 Transcriptional regulatory protein, C terminal RG42_RS09370 PF08328 Adenylosuccinate lyase C-terminal RG42_RS09370 PF00206 Lyase RG42_RS09375 PF04356 Protein of unknown function (DUF489) RG42_RS09385 PF00293 NUDIX domain RG42_RS09390 PF00849 RNA pseudouridylate synthase RG42_RS09395 PF00180 Isocitrate/isopropylmalate dehydrogenase RG42_RS09415 PF03811 InsA N-terminal domain RG42_RS09415 PF12759 InsA C-terminal domain RG42_RS09420 PF03400 IS1 transposase RG42_RS09430 PF07166 Protein of unknown function (DUF1398) RG42_RS09435 PF13411 MerR HTH family regulatory protein RG42_RS09440 PF00563 EAL domain RG42_RS09440 PF04940 Sensors of blue-light using FAD RG42_RS09445 PF10798 Biofilm development protein YmgB/AriR RG42_RS09455 PF10798 Biofilm development protein YmgB/AriR RG42_RS09465 PF00563 EAL domain RG42_RS09465 PF12792 CSS motif domain associated with EAL RG42_RS09475 PF03797 Autotransporter beta-domain RG42_RS09485 PF13436 Glycine-zipper domain RG42_RS09505 PF03797 Autotransporter beta-domain RG42_RS09510 PF03797 Autotransporter beta-domain RG42_RS09520 PF03776 Septum formation topological specificity factor MinE RG42_RS09525 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RG42_RS09530 PF03775 Septum formation inhibitor MinC, C-terminal domain RG42_RS09530 PF05209 Septum formation inhibitor MinC, N-terminal domain RG42_RS09540 PF05666 Fels-1 Prophage Protein-like RG42_RS09545 PF04151 Bacterial pre-peptidase C-terminal domain RG42_RS09555 PF05166 YcgL domain RG42_RS09560 PF01557 Fumarylacetoacetate (FAA) hydrolase family RG42_RS09565 PF03692 Putative zinc- or iron-chelating domain RG42_RS09570 PF06109 Haemolysin E (HlyE) RG42_RS09575 PF00717 Peptidase S24-like RG42_RS09580 PF13438 Domain of unknown function (DUF4113) RG42_RS09580 PF00817 impB/mucB/samB family RG42_RS09580 PF11799 impB/mucB/samB family C-terminal domain RG42_RS09580 PF11798 IMS family HHH motif RG42_RS09585 PF02600 Disulfide bond formation protein DsbB RG42_RS09590 PF06450 Bacterial Na+/H+ antiporter B (NhaB) RG42_RS09595 PF07840 FadR C-terminal domain RG42_RS09595 PF00392 Bacterial regulatory proteins, gntR family RG42_RS09600 PF04293 SpoVR like protein RG42_RS09605 PF01266 FAD dependent oxidoreductase RG42_RS09610 PF00842 Alanine racemase, C-terminal domain RG42_RS09610 PF01168 Alanine racemase, N-terminal domain RG42_RS09615 PF03471 Transporter associated domain RG42_RS09615 PF00999 Sodium/hydrogen exchanger family RG42_RS09615 PF02080 TrkA-C domain RG42_RS09620 PF02016 LD-carboxypeptidase N-terminal domain RG42_RS09620 PF17676 LD-carboxypeptidase C-terminal domain RG42_RS09630 PF01464 Transglycosylase SLT domain RG42_RS09635 PF07317 Flagellar regulator YcgR RG42_RS09635 PF07238 PilZ domain RG42_RS09640 PF04226 Transglycosylase associated protein RG42_RS09650 PF01204 Trehalase RG42_RS09660 PF00391 PEP-utilising enzyme, mobile domain RG42_RS09660 PF00381 PTS HPr component phosphorylation site RG42_RS09660 PF05524 PEP-utilising enzyme, N-terminal RG42_RS09660 PF03610 PTS system fructose IIA component RG42_RS09665 PF02734 DAK2 domain RG42_RS09670 PF02733 Dak1 domain RG42_RS09675 PF00989 PAS fold RG42_RS09675 PF00158 Sigma-54 interaction domain RG42_RS09675 PF02954 Bacterial regulatory protein, Fis family RG42_RS09680 PF03212 Pertactin RG42_RS09680 PF03797 Autotransporter beta-domain RG42_RS09695 PF06071 Protein of unknown function (DUF933) RG42_RS09695 PF01926 50S ribosome-binding GTPase RG42_RS09700 PF01195 Peptidyl-tRNA hydrolase RG42_RS09705 PF10762 Protein of unknown function (DUF2583) RG42_RS09710 PF00916 Sulfate permease family RG42_RS09710 PF01740 STAS domain RG42_RS09715 PF14572 Phosphoribosyl synthetase-associated domain RG42_RS09715 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase RG42_RS09720 PF08544 GHMP kinases C terminal RG42_RS09720 PF00288 GHMP kinases N terminal domain RG42_RS09725 PF03550 Outer membrane lipoprotein LolB RG42_RS09730 PF01488 Shikimate / quinate 5-dehydrogenase RG42_RS09730 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain RG42_RS09730 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain RG42_RS09735 PF00472 RF-1 domain RG42_RS09735 PF03462 PCRF domain RG42_RS09740 PF13847 Methyltransferase domain RG42_RS09740 PF17827 PrmC N-terminal domain RG42_RS09745 PF04247 Invasion gene expression up-regulator, SirB RG42_RS09750 PF13369 Transglutaminase-like superfamily RG42_RS09755 PF00793 DAHP synthetase I family RG42_RS09760 PF13940 Toxin Ldr, type I toxin-antitoxin system RG42_RS09770 PF13940 Toxin Ldr, type I toxin-antitoxin system RG42_RS09780 PF13940 Toxin Ldr, type I toxin-antitoxin system RG42_RS09790 PF01699 Sodium/calcium exchanger protein RG42_RS09795 PF06150 ChaB RG42_RS09800 PF04752 ChaC-like protein RG42_RS09805 PF02635 DsrE/DsrF-like family RG42_RS09810 PF11924 Inverse autotransporter, beta-domain RG42_RS09815 PF00196 Bacterial regulatory proteins, luxR family RG42_RS09815 PF00072 Response regulator receiver domain RG42_RS09820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG42_RS09820 PF07730 Histidine kinase RG42_RS09820 PF00672 HAMP domain RG42_RS09820 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term RG42_RS09830 PF07690 Major Facilitator Superfamily RG42_RS09835 PF00384 Molybdopterin oxidoreductase RG42_RS09835 PF01568 Molydopterin dinucleotide binding domain RG42_RS09835 PF14710 Respiratory nitrate reductase alpha N-terminal RG42_RS09840 PF13247 4Fe-4S dicluster domain RG42_RS09840 PF14711 Respiratory nitrate reductase beta C-terminal RG42_RS09845 PF02613 Nitrate reductase delta subunit RG42_RS09850 PF02665 Nitrate reductase gamma subunit RG42_RS09885 PF00551 Formyl transferase RG42_RS09885 PF01842 ACT domain RG42_RS09890 PF02810 SEC-C motif RG42_RS09895 PF01734 Patatin-like phospholipase RG42_RS09900 PF00072 Response regulator receiver domain RG42_RS09905 PF00483 Nucleotidyl transferase RG42_RS09910 PF00816 H-NS histone family RG42_RS09915 PF00265 Thymidine kinase RG42_RS09925 PF13006 Insertion element 4 transposase N-terminal RG42_RS09925 PF01609 Transposase DDE domain RG42_RS09935 PF00171 Aldehyde dehydrogenase family RG42_RS09935 PF00465 Iron-containing alcohol dehydrogenase RG42_RS09940 PF01914 MarC family integral membrane protein RG42_RS09950 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RG42_RS09955 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS09960 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS09960 PF12911 N-terminal TM domain of oligopeptide transport permease C RG42_RS09965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RG42_RS09965 PF00005 ABC transporter RG42_RS09970 PF00005 ABC transporter RG42_RS09970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RG42_RS09975 PF04269 Protein of unknown function, DUF440 RG42_RS09980 PF13091 PLD-like domain RG42_RS09980 PF13396 Phospholipase_D-nuclease N-terminal RG42_RS09990 PF02254 TrkA-N domain RG42_RS09990 PF07885 Ion channel RG42_RS09995 PF03795 YCII-related domain RG42_RS10000 PF03544 Gram-negative bacterial TonB protein C-terminal RG42_RS10005 PF03061 Thioesterase superfamily RG42_RS10055 PF00717 Peptidase S24-like RG42_RS10060 PF00817 impB/mucB/samB family RG42_RS10060 PF11799 impB/mucB/samB family C-terminal domain RG42_RS10060 PF13438 Domain of unknown function (DUF4113) RG42_RS10065 PF02586 SOS response associated peptidase (SRAP) RG42_RS10070 PF04279 Intracellular septation protein A RG42_RS10080 PF03922 OmpW family RG42_RS10085 PF05974 Domain of unknown function (DUF892) RG42_RS10090 PF05974 Domain of unknown function (DUF892) RG42_RS10095 PF10685 Stress-induced bacterial acidophilic repeat motif RG42_RS10100 PF00290 Tryptophan synthase alpha chain RG42_RS10105 PF00291 Pyridoxal-phosphate dependent enzyme RG42_RS10110 PF00218 Indole-3-glycerol phosphate synthase RG42_RS10110 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase RG42_RS10115 PF00117 Glutamine amidotransferase class-I RG42_RS10115 PF02885 Glycosyl transferase family, helical bundle domain RG42_RS10115 PF00591 Glycosyl transferase family, a/b domain RG42_RS10120 PF00425 chorismate binding enzyme RG42_RS10120 PF04715 Anthranilate synthase component I, N terminal region RG42_RS10125 PF08255 Trp-operon Leader Peptide RG42_RS10130 PF02811 PHP domain RG42_RS10135 PF01300 Telomere recombination RG42_RS10140 PF09972 Predicted membrane protein (DUF2207) RG42_RS10145 PF00849 RNA pseudouridylate synthase RG42_RS10145 PF01479 S4 domain RG42_RS10150 PF12557 Cob(I)alamin adenosyltransferase N terminal RG42_RS10150 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP RG42_RS10155 PF00106 short chain dehydrogenase RG42_RS10165 PF08496 Peptidase family S49 N-terminal RG42_RS10165 PF01343 Peptidase family S49 RG42_RS10170 PF10692 Protein of unknown function (DUF2498) RG42_RS10175 PF08272 Topoisomerase I zinc-ribbon-like RG42_RS10175 PF01131 DNA topoisomerase RG42_RS10175 PF01751 Toprim domain RG42_RS10175 PF01396 Topoisomerase DNA binding C4 zinc finger RG42_RS10185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG42_RS10185 PF03466 LysR substrate binding domain RG42_RS10205 PF00330 Aconitase family (aconitate hydratase) RG42_RS10205 PF00694 Aconitase C-terminal domain RG42_RS10210 PF00925 GTP cyclohydrolase II RG42_RS10215 PF01569 PAP2 superfamily RG42_RS10220 PF06305 Lipopolysaccharide assembly protein A domain RG42_RS10225 PF18073 Rubredoxin metal binding domain RG42_RS10230 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RG42_RS10235 PF01253 Translation initiation factor SUI1 RG42_RS10240 PF05433 Glycine zipper 2TM domain RG42_RS10245 PF08220 DeoR-like helix-turn-helix domain RG42_RS10245 PF00455 DeoR C terminal sensor domain RG42_RS10255 PF13426 PAS domain RG42_RS10255 PF00990 Diguanylate cyclase, GGDEF domain RG42_RS10255 PF00563 EAL domain RG42_RS10265 PF00575 S1 RNA binding domain RG42_RS10265 PF00773 RNB domain RG42_RS10265 PF08206 Ribonuclease B OB domain RG42_RS10265 PF17876 Cold shock domain RG42_RS10280 PF04480 Protein of unknown function (DUF559) RG42_RS10290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RG42_RS10290 PF00005 ABC transporter RG42_RS10295 PF12911 N-terminal TM domain of oligopeptide transport permease C RG42_RS10295 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS10300 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS10305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RG42_RS10315 PF10820 Protein of unknown function (DUF2543) RG42_RS10320 PF00324 Amino acid permease RG42_RS10325 PF00120 Glutamine synthetase, catalytic domain RG42_RS10330 PF07722 Peptidase C26 RG42_RS10335 PF01381 Helix-turn-helix RG42_RS10335 PF07883 Cupin domain RG42_RS10345 PF00171 Aldehyde dehydrogenase family RG42_RS10350 PF01266 FAD dependent oxidoreductase RG42_RS10355 PF00202 Aminotransferase class-III RG42_RS10360 PF02954 Bacterial regulatory protein, Fis family RG42_RS10360 PF00158 Sigma-54 interaction domain RG42_RS10365 PF04012 PspA/IM30 family RG42_RS10370 PF06667 Phage shock protein B RG42_RS10375 PF04024 PspC domain RG42_RS10380 PF09584 Phage shock protein PspD (Phageshock_PspD) RG42_RS10385 PF00581 Rhodanese-like domain RG42_RS10390 PF00128 Alpha amylase, catalytic domain RG42_RS10395 PF01547 Bacterial extracellular solute-binding protein RG42_RS10400 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS10405 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS10410 PF00107 Zinc-binding dehydrogenase RG42_RS10415 PF01261 Xylose isomerase-like TIM barrel RG42_RS10420 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RG42_RS10420 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RG42_RS10430 PF13419 Haloacid dehalogenase-like hydrolase RG42_RS10435 PF03459 TOBE domain RG42_RS10435 PF00005 ABC transporter RG42_RS10435 PF17912 MalK OB fold domain RG42_RS10440 PF09381 Outer membrane protein G (OmpG) RG42_RS10445 PF00356 Bacterial regulatory proteins, lacI family RG42_RS10445 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RG42_RS10450 PF04317 YcjX-like family, DUF463 RG42_RS10455 PF05128 Domain of unknown function (DUF697) RG42_RS10460 PF00158 Sigma-54 interaction domain RG42_RS10460 PF18024 Helix-turn-helix domain RG42_RS10460 PF13188 PAS domain RG42_RS10465 PF08534 Redoxin RG42_RS10470 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RG42_RS10470 PF13378 Enolase C-terminal domain-like RG42_RS10475 PF00246 Zinc carboxypeptidase RG42_RS10485 PF12146 Serine aminopeptidase, S33 RG42_RS10490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG42_RS10490 PF03466 LysR substrate binding domain RG42_RS10500 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RG42_RS10505 PF00924 Mechanosensitive ion channel RG42_RS10510 PF10749 Protein of unknown function (DUF2534) RG42_RS10515 PF00582 Universal stress protein family RG42_RS10520 PF00027 Cyclic nucleotide-binding domain RG42_RS10520 PF00325 Bacterial regulatory proteins, crp family RG42_RS10525 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RG42_RS10525 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RG42_RS10530 PF03806 AbgT putative transporter family RG42_RS10540 PF01546 Peptidase family M20/M25/M40 RG42_RS10545 PF07687 Peptidase dimerisation domain RG42_RS10545 PF01546 Peptidase family M20/M25/M40 RG42_RS10550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG42_RS10550 PF03466 LysR substrate binding domain RG42_RS10560 PF01713 Smr domain RG42_RS10565 PF00990 Diguanylate cyclase, GGDEF domain RG42_RS10565 PF08448 PAS fold RG42_RS10570 PF01544 CorA-like Mg2+ transporter protein RG42_RS10580 PF00271 Helicase conserved C-terminal domain RG42_RS10580 PF03880 DbpA RNA binding domain RG42_RS10580 PF00270 DEAD/DEAH box helicase RG42_RS10585 PF01171 PP-loop family RG42_RS10590 PF00589 Phage integrase family RG42_RS10590 PF12167 Arm DNA-binding domain RG42_RS10595 PF06806 Putative excisionase (DUF1233) RG42_RS10600 PF06688 Protein of unknown function (DUF1187) RG42_RS10610 PF03837 RecT family RG42_RS10615 PF12684 PDDEXK-like domain of unknown function (DUF3799) RG42_RS10615 PF06630 Enterobacterial exodeoxyribonuclease VIII RG42_RS10625 PF04181 Rtr1/RPAP2 family RG42_RS10640 PF14163 Super-infection exclusion protein B RG42_RS10645 PF07151 Protein of unknown function (DUF1391) RG42_RS10660 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT RG42_RS10665 PF06254 Putative bacterial toxin ydaT RG42_RS10670 PF07120 Protein of unknown function (DUF1376) RG42_RS10675 PF01695 IstB-like ATP binding protein RG42_RS10680 PF07789 Protein of unknown function (DUF1627) RG42_RS10700 PF01848 Hok/gef family RG42_RS10710 PF01609 Transposase DDE domain RG42_RS10725 PF07102 Protein of unknown function (DUF1364) RG42_RS10735 PF06519 TolA C-terminal RG42_RS10745 PF04971 Bacteriophage P21 holin S RG42_RS10750 PF00959 Phage lysozyme RG42_RS10755 PF03245 Bacteriophage Rz lysis protein RG42_RS10760 PF02386 Cation transport protein RG42_RS10770 PF02195 ParB-like nuclease domain RG42_RS10805 PF05717 IS66 Orf2 like protein RG42_RS10810 PF03050 Transposase IS66 family RG42_RS10810 PF13817 IS66 C-terminal element RG42_RS10810 PF13007 Transposase C of IS166 homeodomain RG42_RS10810 PF13005 zinc-finger binding domain of transposase IS66 RG42_RS10815 PF00665 Integrase core domain RG42_RS10825 PF01527 Transposase RG42_RS10835 PF02413 Caudovirales tail fibre assembly protein, lambda gpK RG42_RS10840 PF00239 Resolvase, N terminal domain RG42_RS10840 PF02796 Helix-turn-helix domain of resolvase RG42_RS10850 PF00582 Universal stress protein family RG42_RS10855 PF00267 Gram-negative porin RG42_RS10860 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RG42_RS10860 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase RG42_RS10860 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg RG42_RS10860 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II RG42_RS10860 PF10371 Domain of unknown function RG42_RS10865 PF03891 Domain of unknown function (DUF333) RG42_RS10870 PF03724 META domain RG42_RS10875 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RG42_RS10875 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RG42_RS10880 PF11739 Dicarboxylate transport RG42_RS10885 PF13617 YnbE-like lipoprotein RG42_RS10890 PF07027 Protein of unknown function (DUF1318) RG42_RS10895 PF12833 Helix-turn-helix domain RG42_RS10895 PF14525 AraC-binding-like domain RG42_RS10900 PF00171 Aldehyde dehydrogenase family RG42_RS10905 PF02728 Copper amine oxidase, N3 domain RG42_RS10905 PF02727 Copper amine oxidase, N2 domain RG42_RS10905 PF07833 Copper amine oxidase N-terminal domain RG42_RS10905 PF01179 Copper amine oxidase, enzyme domain RG42_RS10910 PF01575 MaoC like domain RG42_RS10910 PF00171 Aldehyde dehydrogenase family RG42_RS10915 PF05138 Phenylacetic acid catabolic protein RG42_RS10920 PF06243 Phenylacetic acid degradation B RG42_RS10925 PF05138 Phenylacetic acid catabolic protein RG42_RS10930 PF01883 Iron-sulfur cluster assembly protein RG42_RS10935 PF00970 Oxidoreductase FAD-binding domain RG42_RS10935 PF00175 Oxidoreductase NAD-binding domain RG42_RS10935 PF00111 2Fe-2S iron-sulfur cluster binding domain RG42_RS10940 PF00378 Enoyl-CoA hydratase/isomerase RG42_RS10945 PF00378 Enoyl-CoA hydratase/isomerase RG42_RS10950 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RG42_RS10950 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain RG42_RS10950 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RG42_RS10955 PF03061 Thioesterase superfamily RG42_RS10960 PF02803 Thiolase, C-terminal domain RG42_RS10960 PF00108 Thiolase, N-terminal domain RG42_RS10965 PF00501 AMP-binding enzyme RG42_RS10965 PF14535 AMP-binding enzyme C-terminal domain RG42_RS10970 PF08223 PaaX-like protein C-terminal domain RG42_RS10970 PF07848 PaaX-like protein RG42_RS10975 PF00132 Bacterial transferase hexapeptide (six repeats) RG42_RS10985 PF00248 Aldo/keto reductase family RG42_RS10990 PF10971 Protein of unknown function (DUF2773) RG42_RS10995 PF01066 CDP-alcohol phosphatidyltransferase RG42_RS11005 PF12147 Putative methyltransferase RG42_RS11005 PF12146 Serine aminopeptidase, S33 RG42_RS11010 PF00782 Dual specificity phosphatase, catalytic domain RG42_RS11015 PF02525 Flavodoxin-like fold RG42_RS11020 PF11898 Domain of unknown function (DUF3418) RG42_RS11020 PF04408 Helicase associated domain (HA2) RG42_RS11020 PF00271 Helicase conserved C-terminal domain RG42_RS11020 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold RG42_RS11020 PF00270 DEAD/DEAH box helicase RG42_RS11025 PF02698 DUF218 domain RG42_RS11030 PF00171 Aldehyde dehydrogenase family RG42_RS11035 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RG42_RS11035 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RG42_RS11040 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RG42_RS11040 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RG42_RS11045 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RG42_RS11045 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RG42_RS11050 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RG42_RS11050 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RG42_RS11055 PF01292 Prokaryotic cytochrome b561 RG42_RS11065 PF01848 Hok/gef family RG42_RS11070 PF02203 Tar ligand binding domain homologue RG42_RS11070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RG42_RS11070 PF00672 HAMP domain RG42_RS11075 PF03466 LysR substrate binding domain RG42_RS11075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG42_RS11080 PF07063 Domain of unknown function (DUF1338) RG42_RS11090 PF04349 Periplasmic glucan biosynthesis protein, MdoG RG42_RS11100 PF04325 Protein of unknown function (DUF465) RG42_RS11105 PF13302 Acetyltransferase (GNAT) domain RG42_RS11110 PF18836 Beta solenoid repeat from YDCK RG42_RS11115 PF03595 Voltage-dependent anion channel RG42_RS11120 PF03848 Tellurite resistance protein TehB RG42_RS11125 PF11769 Protein of unknown function (DUF3313) RG42_RS11135 PF12323 Helix-turn-helix domain RG42_RS11135 PF01385 Probable transposase RG42_RS11135 PF07282 Putative transposase DNA-binding domain RG42_RS11140 PF03594 Benzoate membrane transport protein RG42_RS11145 PF01381 Helix-turn-helix RG42_RS11145 PF07883 Cupin domain RG42_RS11150 PF12392 Collagenase RG42_RS11150 PF01136 Peptidase family U32 RG42_RS11155 PF10829 Protein of unknown function (DUF2554) RG42_RS11160 PF07927 HicA toxin of bacterial toxin-antitoxin, RG42_RS11165 PF01381 Helix-turn-helix RG42_RS11165 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system RG42_RS11170 PF00392 Bacterial regulatory proteins, gntR family RG42_RS11170 PF00155 Aminotransferase class I and II RG42_RS11175 PF13416 Bacterial extracellular solute-binding protein RG42_RS11180 PF08402 TOBE domain RG42_RS11180 PF00005 ABC transporter RG42_RS11185 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS11190 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS11195 PF00171 Aldehyde dehydrogenase family RG42_RS11210 PF10753 Toxin GhoT_OrtT RG42_RS11215 PF10735 Protein of unknown function (DUF2526) RG42_RS11220 PF04657 Putative inner membrane exporter, YdcZ RG42_RS11225 PF00583 Acetyltransferase (GNAT) family RG42_RS11235 PF00107 Zinc-binding dehydrogenase RG42_RS11235 PF16884 N-terminal domain of oxidoreductase RG42_RS11240 PF00392 Bacterial regulatory proteins, gntR family RG42_RS11240 PF07729 FCD domain RG42_RS11245 PF07715 TonB-dependent Receptor Plug Domain RG42_RS11245 PF00593 TonB dependent receptor RG42_RS11265 PF00324 Amino acid permease RG42_RS11270 PF13417 Glutathione S-transferase, N-terminal domain RG42_RS11275 PF17520 Family of unknown function (DUF5445) RG42_RS11280 PF04717 Type VI secretion system, phage-baseplate injector RG42_RS11285 PF05593 RHS Repeat RG42_RS11285 PF14220 Domain of unknown function (DUF4329) RG42_RS11285 PF03527 RHS protein RG42_RS11295 PF01609 Transposase DDE domain RG42_RS11295 PF13808 DDE_Tnp_1-associated RG42_RS11300 PF01609 Transposase DDE domain RG42_RS11300 PF13808 DDE_Tnp_1-associated RG42_RS11310 PF01609 Transposase DDE domain RG42_RS11310 PF13808 DDE_Tnp_1-associated RG42_RS11315 PF01361 Tautomerase enzyme RG42_RS11320 PF01613 Flavin reductase like domain RG42_RS11325 PF00797 N-acetyltransferase RG42_RS11330 PF02567 Phenazine biosynthesis-like protein RG42_RS11335 PF02665 Nitrate reductase gamma subunit RG42_RS11340 PF02613 Nitrate reductase delta subunit RG42_RS11345 PF13247 4Fe-4S dicluster domain RG42_RS11345 PF14711 Respiratory nitrate reductase beta C-terminal RG42_RS11350 PF00384 Molybdopterin oxidoreductase RG42_RS11350 PF01568 Molydopterin dinucleotide binding domain RG42_RS11350 PF14710 Respiratory nitrate reductase alpha N-terminal RG42_RS11355 PF07690 Major Facilitator Superfamily RG42_RS11370 PF00267 Gram-negative porin RG42_RS11375 PF00892 EamA-like transporter family RG42_RS11380 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RG42_RS11380 PF01568 Molydopterin dinucleotide binding domain RG42_RS11380 PF00384 Molybdopterin oxidoreductase RG42_RS11385 PF01568 Molydopterin dinucleotide binding domain RG42_RS11385 PF00384 Molybdopterin oxidoreductase RG42_RS11385 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RG42_RS11390 PF12800 4Fe-4S binding domain RG42_RS11390 PF09163 Formate dehydrogenase N, transmembrane RG42_RS11390 PF13247 4Fe-4S dicluster domain RG42_RS11395 PF01292 Prokaryotic cytochrome b561 RG42_RS11405 PF01381 Helix-turn-helix RG42_RS11410 PF08240 Alcohol dehydrogenase GroES-like domain RG42_RS11410 PF00107 Zinc-binding dehydrogenase RG42_RS11415 PF00390 Malic enzyme, N-terminal domain RG42_RS11415 PF03949 Malic enzyme, NAD binding domain RG42_RS11420 PF08136 30S ribosomal protein subunit S22 family RG42_RS11425 PF10684 Putative biofilm-dependent modulation protein RG42_RS11435 PF02566 OsmC-like protein RG42_RS11440 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RG42_RS11440 PF00005 ABC transporter RG42_RS11445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RG42_RS11445 PF00005 ABC transporter RG42_RS11450 PF12911 N-terminal TM domain of oligopeptide transport permease C RG42_RS11450 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS11455 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS11460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RG42_RS11465 PF01427 D-ala-D-ala dipeptidase RG42_RS11470 PF00563 EAL domain RG42_RS11470 PF13426 PAS domain RG42_RS11470 PF00990 Diguanylate cyclase, GGDEF domain RG42_RS11475 PF00990 Diguanylate cyclase, GGDEF domain RG42_RS11480 PF02638 Glycosyl hydrolase-like 10 RG42_RS11485 PF13520 Amino acid permease RG42_RS11490 PF00282 Pyridoxal-dependent decarboxylase conserved domain RG42_RS11505 PF00675 Insulinase (Peptidase family M16) RG42_RS11505 PF05193 Peptidase M16 inactive domain RG42_RS11510 PF07715 TonB-dependent Receptor Plug Domain RG42_RS11515 PF06472 ABC transporter transmembrane region 2 RG42_RS11515 PF00005 ABC transporter RG42_RS11520 PF13186 Iron-sulfur cluster-binding domain RG42_RS11520 PF04055 Radical SAM superfamily RG42_RS11525 PF00884 Sulfatase RG42_RS11530 PF12833 Helix-turn-helix domain RG42_RS11535 PF17073 Two-component-system connector protein RG42_RS11540 PF00384 Molybdopterin oxidoreductase RG42_RS11545 PF09160 FimH, mannose binding RG42_RS11550 PF00419 Fimbrial protein RG42_RS11555 PF00419 Fimbrial protein RG42_RS11560 PF13953 PapC C-terminal domain RG42_RS11560 PF00577 Outer membrane usher protein RG42_RS11575 PF13657 HipA N-terminal domain RG42_RS11575 PF07804 HipA-like C-terminal domain RG42_RS11580 PF01381 Helix-turn-helix RG42_RS11585 PF03797 Autotransporter beta-domain RG42_RS11590 PF13018 Extended Signal Peptide of Type V secretion system RG42_RS11595 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RG42_RS11595 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RG42_RS11600 PF04198 Putative sugar-binding domain RG42_RS11605 PF00005 ABC transporter RG42_RS11610 PF02653 Branched-chain amino acid transport system / permease component RG42_RS11615 PF02653 Branched-chain amino acid transport system / permease component RG42_RS11620 PF13407 Periplasmic binding protein domain RG42_RS11625 PF01791 DeoC/LacD family aldolase RG42_RS11630 PF03992 Antibiotic biosynthesis monooxygenase RG42_RS11635 PF13649 Methyltransferase domain RG42_RS11640 PF01062 Bestrophin, RFP-TM, chloride channel RG42_RS11650 PF01232 Mannitol dehydrogenase Rossmann domain RG42_RS11650 PF08125 Mannitol dehydrogenase C-terminal domain RG42_RS11660 PF00990 Diguanylate cyclase, GGDEF domain RG42_RS11665 PF13811 Domain of unknown function (DUF4186) RG42_RS11670 PF04960 Glutaminase RG42_RS11675 PF00171 Aldehyde dehydrogenase family RG42_RS11680 PF03466 LysR substrate binding domain RG42_RS11680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG42_RS11695 PF07690 Major Facilitator Superfamily RG42_RS11700 PF01914 MarC family integral membrane protein RG42_RS11705 PF01047 MarR family RG42_RS11710 PF12833 Helix-turn-helix domain RG42_RS11715 PF13999 MarB protein RG42_RS11720 PF00892 EamA-like transporter family RG42_RS11725 PF07690 Major Facilitator Superfamily RG42_RS11735 PF00990 Diguanylate cyclase, GGDEF domain RG42_RS11740 PF04076 Bacterial OB fold (BOF) protein RG42_RS11745 PF02464 Competence-damaged protein RG42_RS11750 PF01432 Peptidase family M3 RG42_RS11760 PF00106 short chain dehydrogenase RG42_RS11765 PF00392 Bacterial regulatory proteins, gntR family RG42_RS11765 PF07729 FCD domain RG42_RS11770 PF14001 YdfZ protein RG42_RS11775 PF01232 Mannitol dehydrogenase Rossmann domain RG42_RS11775 PF08125 Mannitol dehydrogenase C-terminal domain RG42_RS11780 PF00083 Sugar (and other) transporter RG42_RS11780 PF07690 Major Facilitator Superfamily RG42_RS11785 PF00107 Zinc-binding dehydrogenase RG42_RS11785 PF08240 Alcohol dehydrogenase GroES-like domain RG42_RS11790 PF13378 Enolase C-terminal domain-like RG42_RS11790 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RG42_RS11795 PF02694 Uncharacterised BCR, YnfA/UPF0060 family RG42_RS11800 PF06932 Protein of unknown function (DUF1283) RG42_RS11805 PF13302 Acetyltransferase (GNAT) domain RG42_RS11810 PF06788 Uncharacterised protein family (UPF0257) RG42_RS11815 PF06649 Protein of unknown function (DUF1161) RG42_RS11820 PF00384 Molybdopterin oxidoreductase RG42_RS11820 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RG42_RS11820 PF01568 Molydopterin dinucleotide binding domain RG42_RS11835 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RG42_RS11835 PF00384 Molybdopterin oxidoreductase RG42_RS11835 PF01568 Molydopterin dinucleotide binding domain RG42_RS11840 PF12800 4Fe-4S binding domain RG42_RS11840 PF13247 4Fe-4S dicluster domain RG42_RS11845 PF04976 DMSO reductase anchor subunit (DmsC) RG42_RS11850 PF02613 Nitrate reductase delta subunit RG42_RS11855 PF00654 Voltage gated chloride channel RG42_RS11865 PF00480 ROK family RG42_RS11870 PF03466 LysR substrate binding domain RG42_RS11870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG42_RS11875 PF07690 Major Facilitator Superfamily RG42_RS11895 PF00089 Trypsin RG42_RS11900 PF00893 Small Multidrug Resistance protein RG42_RS11905 PF00893 Small Multidrug Resistance protein RG42_RS11910 PF01594 AI-2E family transporter RG42_RS11915 PF02233 NAD(P) transhydrogenase beta subunit RG42_RS11920 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch RG42_RS11920 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RG42_RS11920 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RG42_RS11925 PF07338 Protein of unknown function (DUF1471) RG42_RS11935 PF13520 Amino acid permease RG42_RS11945 PF06942 GlpM protein RG42_RS11950 PF00072 Response regulator receiver domain RG42_RS11950 PF00486 Transcriptional regulatory protein, C terminal RG42_RS11955 PF00512 His Kinase A (phospho-acceptor) domain RG42_RS11955 PF00672 HAMP domain RG42_RS11955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG42_RS11960 PF05472 DNA replication terminus site-binding protein (Ter protein) RG42_RS11965 PF10415 Fumarase C C-terminus RG42_RS11965 PF00206 Lyase RG42_RS11970 PF05681 Fumarate hydratase (Fumerase) RG42_RS11970 PF05683 Fumarase C-terminus RG42_RS11975 PF01238 Phosphomannose isomerase type I RG42_RS11980 PF06097 Bacterial protein of unknown function (DUF945) RG42_RS11985 PF03573 outer membrane porin, OprD family RG42_RS11995 PF02836 Glycosyl hydrolases family 2, TIM barrel domain RG42_RS11995 PF02837 Glycosyl hydrolases family 2, sugar binding domain RG42_RS11995 PF00703 Glycosyl hydrolases family 2 RG42_RS12000 PF00440 Bacterial regulatory proteins, tetR family RG42_RS12010 PF00356 Bacterial regulatory proteins, lacI family RG42_RS12010 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RG42_RS12015 PF02378 Phosphotransferase system, EIIC RG42_RS12015 PF00367 phosphotransferase system, EIIB RG42_RS12020 PF00155 Aminotransferase class I and II RG42_RS12025 PF00962 Adenosine/AMP deaminase RG42_RS12030 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RG42_RS12030 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RG42_RS12045 PF05321 Haemolysin expression modulating protein RG42_RS12050 PF10754 Protein of unknown function (DUF2569) RG42_RS12055 PF02508 Rnf-Nqr subunit, membrane protein RG42_RS12060 PF04060 Putative Fe-S cluster RG42_RS12065 PF12838 4Fe-4S dicluster domain RG42_RS12065 PF10531 SLBB domain RG42_RS12065 PF13375 RnfC Barrel sandwich hybrid domain RG42_RS12065 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit RG42_RS12070 PF03116 NQR2, RnfD, RnfE family RG42_RS12075 PF04205 FMN-binding domain RG42_RS12080 PF02508 Rnf-Nqr subunit, membrane protein RG42_RS12085 PF10576 Iron-sulfur binding domain of endonuclease III RG42_RS12085 PF00633 Helix-hairpin-helix motif RG42_RS12085 PF00730 HhH-GPD superfamily base excision DNA repair protein RG42_RS12095 PF00854 POT family RG42_RS12100 PF02798 Glutathione S-transferase, N-terminal domain RG42_RS12100 PF00043 Glutathione S-transferase, C-terminal domain RG42_RS12105 PF08543 Phosphomethylpyrimidine kinase RG42_RS12110 PF00579 tRNA synthetases class I (W and Y) RG42_RS12110 PF01479 S4 domain RG42_RS12115 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region RG42_RS12115 PF01243 Pyridoxamine 5'-phosphate oxidase RG42_RS12120 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme RG42_RS12125 PF03702 Anhydro-N-acetylmuramic acid kinase RG42_RS12130 PF05433 Glycine zipper 2TM domain RG42_RS12135 PF01047 MarR family RG42_RS12140 PF07869 Protein of unknown function (DUF1656) RG42_RS12145 PF00529 HlyD membrane-fusion protein of T1SS RG42_RS12145 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RG42_RS12150 PF04632 Fusaric acid resistance protein family RG42_RS12155 PF00080 Copper/zinc superoxide dismutase (SODC) RG42_RS12160 PF00248 Aldo/keto reductase family RG42_RS12165 PF06945 Protein of unknown function (DUF1289) RG42_RS12170 PF16925 Tetracyclin repressor-like, C-terminal domain RG42_RS12170 PF00440 Bacterial regulatory proteins, tetR family RG42_RS12175 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RG42_RS12180 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RG42_RS12185 PF00929 Exonuclease RG42_RS12190 PF08494 DEAD/H associated RG42_RS12190 PF00270 DEAD/DEAH box helicase RG42_RS12190 PF00271 Helicase conserved C-terminal domain RG42_RS12195 PF00462 Glutaredoxin RG42_RS12200 PF00877 NlpC/P60 family RG42_RS12205 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RG42_RS12205 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RG42_RS12210 PF07690 Major Facilitator Superfamily RG42_RS12225 PF00356 Bacterial regulatory proteins, lacI family RG42_RS12230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG42_RS12230 PF03466 LysR substrate binding domain RG42_RS12235 PF07690 Major Facilitator Superfamily RG42_RS12245 PF00677 Lumazine binding domain RG42_RS12250 PF01554 MatE RG42_RS12255 PF16168 Adhesin of bacterial autotransporter system, probable stalk RG42_RS12255 PF03212 Pertactin RG42_RS12270 PF08803 Putative mono-oxygenase ydhR RG42_RS12275 PF13454 FAD-NAD(P)-binding RG42_RS12285 PF01292 Prokaryotic cytochrome b561 RG42_RS12290 PF13247 4Fe-4S dicluster domain RG42_RS12300 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain RG42_RS12300 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 RG42_RS12305 PF12800 4Fe-4S binding domain RG42_RS12305 PF13247 4Fe-4S dicluster domain RG42_RS12310 PF10965 Protein of unknown function (DUF2767) RG42_RS12315 PF02887 Pyruvate kinase, alpha/beta domain RG42_RS12315 PF00224 Pyruvate kinase, barrel domain RG42_RS12320 PF04728 Lipoprotein leucine-zipper RG42_RS12325 PF01476 LysM domain RG42_RS12325 PF17969 L,D-transpeptidase C-terminal domain RG42_RS12325 PF03734 L,D-transpeptidase catalytic domain RG42_RS12330 PF02657 Fe-S metabolism associated domain RG42_RS12335 PF00266 Aminotransferase class-V RG42_RS12340 PF01458 Uncharacterized protein family (UPF0051) RG42_RS12345 PF00005 ABC transporter RG42_RS12350 PF01458 Uncharacterized protein family (UPF0051) RG42_RS12355 PF01521 Iron-sulphur cluster biosynthesis RG42_RS12360 PF15930 Domain of unknown function RG42_RS12365 PF03061 Thioesterase superfamily RG42_RS12370 PF02913 FAD linked oxidases, C-terminal domain RG42_RS12370 PF01565 FAD binding domain RG42_RS12370 PF13183 4Fe-4S dicluster domain RG42_RS12380 PF01594 AI-2E family transporter RG42_RS12390 PF08965 Domain of unknown function (DUF1870) RG42_RS12395 PF07690 Major Facilitator Superfamily RG42_RS12400 PF07690 Major Facilitator Superfamily RG42_RS12405 PF18317 Shikimate 5'-dehydrogenase C-terminal domain RG42_RS12405 PF08501 Shikimate dehydrogenase substrate binding domain RG42_RS12410 PF01487 Type I 3-dehydroquinase RG42_RS12415 PF01144 Coenzyme A transferase RG42_RS12420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RG42_RS12420 PF02770 Acyl-CoA dehydrogenase, middle domain RG42_RS12420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RG42_RS12425 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RG42_RS12425 PF02770 Acyl-CoA dehydrogenase, middle domain RG42_RS12425 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RG42_RS12430 PF02311 AraC-like ligand binding domain RG42_RS12430 PF12833 Helix-turn-helix domain RG42_RS12440 PF01012 Electron transfer flavoprotein domain RG42_RS12445 PF01012 Electron transfer flavoprotein domain RG42_RS12445 PF00766 Electron transfer flavoprotein FAD-binding domain RG42_RS12450 PF01494 FAD binding domain RG42_RS12460 PF13193 AMP-binding enzyme C-terminal domain RG42_RS12460 PF00501 AMP-binding enzyme RG42_RS12465 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain RG42_RS12465 PF02896 PEP-utilising enzyme, TIM barrel domain RG42_RS12465 PF00391 PEP-utilising enzyme, mobile domain RG42_RS12470 PF03618 Kinase/pyrophosphorylase RG42_RS12475 PF00793 DAHP synthetase I family RG42_RS12480 PF10636 Hemin uptake protein hemP RG42_RS12485 PF02696 Uncharacterized ACR, YdiU/UPF0061 family RG42_RS12490 PF00563 EAL domain RG42_RS12495 PF00877 NlpC/P60 family RG42_RS12500 PF00005 ABC transporter RG42_RS12505 PF00255 Glutathione peroxidase RG42_RS12510 PF01032 FecCD transport family RG42_RS12515 PF00216 Bacterial DNA-binding protein RG42_RS12520 PF03483 B3/4 domain RG42_RS12520 PF03484 tRNA synthetase B5 domain RG42_RS12520 PF03147 Ferredoxin-fold anticodon binding domain RG42_RS12520 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain RG42_RS12520 PF01588 Putative tRNA binding domain RG42_RS12525 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain RG42_RS12525 PF01409 tRNA synthetases class II core domain (F) RG42_RS12540 PF00453 Ribosomal protein L20 RG42_RS12545 PF01632 Ribosomal protein L35 RG42_RS12550 PF00707 Translation initiation factor IF-3, C-terminal domain RG42_RS12550 PF05198 Translation initiation factor IF-3, N-terminal domain RG42_RS12555 PF03129 Anticodon binding domain RG42_RS12555 PF02824 TGS domain RG42_RS12555 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RG42_RS12555 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RG42_RS12570 PF07906 ShET2 enterotoxin, N-terminal region RG42_RS12580 PF04338 Protein of unknown function, DUF481 RG42_RS12585 PF00294 pfkB family carbohydrate kinase RG42_RS12590 PF11080 Endoribonuclease GhoS RG42_RS12595 PF03881 Fructosamine kinase RG42_RS12600 PF14002 YniB-like protein RG42_RS12605 PF13419 Haloacid dehalogenase-like hydrolase RG42_RS12610 PF04307 LexA-binding, inner membrane-associated putative hydrolase RG42_RS12615 PF00375 Sodium:dicarboxylate symporter family RG42_RS12625 PF10729 Cell division activator CedA RG42_RS12630 PF18011 C-terminal domain found in long catalases RG42_RS12630 PF00199 Catalase RG42_RS12630 PF06628 Catalase-related immune-responsive RG42_RS12640 PF04794 YdjC-like protein RG42_RS12645 PF11975 Family 4 glycosyl hydrolase C-terminal domain RG42_RS12645 PF02056 Family 4 glycosyl hydrolase RG42_RS12650 PF12833 Helix-turn-helix domain RG42_RS12650 PF07883 Cupin domain RG42_RS12655 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit RG42_RS12660 PF02378 Phosphotransferase system, EIIC RG42_RS12665 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RG42_RS12675 PF04355 SmpA / OmlA family RG42_RS12680 PF02540 NAD synthase RG42_RS12690 PF05962 HutD RG42_RS12695 PF07813 LTXXQ motif family protein RG42_RS12700 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family RG42_RS12705 PF04996 Succinylarginine dihydrolase RG42_RS12710 PF00171 Aldehyde dehydrogenase family RG42_RS12715 PF04958 Arginine N-succinyltransferase beta subunit RG42_RS12720 PF00202 Aminotransferase class-III RG42_RS12730 PF03372 Endonuclease/Exonuclease/phosphatase family RG42_RS12735 PF09335 SNARE associated Golgi protein RG42_RS12745 PF09335 SNARE associated Golgi protein RG42_RS12750 PF02627 Carboxymuconolactone decarboxylase family RG42_RS12755 PF13416 Bacterial extracellular solute-binding protein RG42_RS12760 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS12765 PF00005 ABC transporter RG42_RS12770 PF00581 Rhodanese-like domain RG42_RS12775 PF01066 CDP-alcohol phosphatidyltransferase RG42_RS12780 PF00293 NUDIX domain RG42_RS12785 PF07383 Protein of unknown function (DUF1496) RG42_RS12790 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain RG42_RS12790 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RG42_RS12795 PF06889 Protein of unknown function (DUF1266) RG42_RS12805 PF06889 Protein of unknown function (DUF1266) RG42_RS12810 PF01751 Toprim domain RG42_RS12810 PF01131 DNA topoisomerase RG42_RS12815 PF00586 AIR synthase related protein, N-terminal domain RG42_RS12815 PF02769 AIR synthase related protein, C-terminal domain RG42_RS12825 PF00881 Nitroreductase family RG42_RS12830 PF01343 Peptidase family S49 RG42_RS12835 PF00710 Asparaginase, N-terminal RG42_RS12835 PF17763 Glutaminase/Asparaginase C-terminal domain RG42_RS12840 PF00857 Isochorismatase family RG42_RS12845 PF00083 Sugar (and other) transporter RG42_RS12850 PF00455 DeoR C terminal sensor domain RG42_RS12850 PF08220 DeoR-like helix-turn-helix domain RG42_RS12855 PF00248 Aldo/keto reductase family RG42_RS12860 PF00294 pfkB family carbohydrate kinase RG42_RS12865 PF01116 Fructose-bisphosphate aldolase class-II RG42_RS12870 PF00107 Zinc-binding dehydrogenase RG42_RS12870 PF08240 Alcohol dehydrogenase GroES-like domain RG42_RS12875 PF00083 Sugar (and other) transporter RG42_RS12880 PF00107 Zinc-binding dehydrogenase RG42_RS12880 PF08240 Alcohol dehydrogenase GroES-like domain RG42_RS12885 PF07023 Protein of unknown function (DUF1315) RG42_RS12890 PF01641 SelR domain RG42_RS12895 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RG42_RS12895 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RG42_RS12900 PF01263 Aldose 1-epimerase RG42_RS12905 PF00248 Aldo/keto reductase family RG42_RS12910 PF06629 MltA-interacting protein MipA RG42_RS12915 PF08298 PrkA AAA domain RG42_RS12915 PF06798 PrkA serine protein kinase C-terminal domain RG42_RS12920 PF04285 Protein of unknown function (DUF444) RG42_RS12925 PF00990 Diguanylate cyclase, GGDEF domain RG42_RS12925 PF17158 Membrane-associated sensor, integral membrane domain RG42_RS12930 PF00990 Diguanylate cyclase, GGDEF domain RG42_RS12930 PF17155 Gammaproteobacterial periplasmic sensor domain RG42_RS12935 PF17155 Gammaproteobacterial periplasmic sensor domain RG42_RS12935 PF00990 Diguanylate cyclase, GGDEF domain RG42_RS12940 PF04073 Aminoacyl-tRNA editing domain RG42_RS12950 PF04284 Protein of unknown function (DUF441) RG42_RS12955 PF12833 Helix-turn-helix domain RG42_RS12955 PF02311 AraC-like ligand binding domain RG42_RS12960 PF07690 Major Facilitator Superfamily RG42_RS12965 PF04343 Protein of unknown function, DUF488 RG42_RS12970 PF03891 Domain of unknown function (DUF333) RG42_RS12975 PF00990 Diguanylate cyclase, GGDEF domain RG42_RS12975 PF13185 GAF domain RG42_RS12990 PF04226 Transglycosylase associated protein RG42_RS12995 PF08956 Domain of unknown function (DUF1869) RG42_RS13000 PF09313 Domain of unknown function (DUF1971) RG42_RS13005 PF01810 LysE type translocator RG42_RS13010 PF03466 LysR substrate binding domain RG42_RS13010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG42_RS13015 PF00180 Isocitrate/isopropylmalate dehydrogenase RG42_RS13020 PF02028 BCCT, betaine/carnitine/choline family transporter RG42_RS13025 PF00848 Ring hydroxylating alpha subunit (catalytic domain) RG42_RS13025 PF00355 Rieske [2Fe-2S] domain RG42_RS13030 PF00111 2Fe-2S iron-sulfur cluster binding domain RG42_RS13030 PF00970 Oxidoreductase FAD-binding domain RG42_RS13030 PF00175 Oxidoreductase NAD-binding domain RG42_RS13035 PF01612 3'-5' exonuclease RG42_RS13035 PF00570 HRDC domain RG42_RS13040 PF00501 AMP-binding enzyme RG42_RS13040 PF13193 AMP-binding enzyme C-terminal domain RG42_RS13045 PF03843 Outer membrane lipoprotein Slp family RG42_RS13050 PF00814 Glycoprotease family RG42_RS13055 PF04851 Type III restriction enzyme, res subunit RG42_RS13055 PF13307 Helicase C-terminal domain RG42_RS13060 PF01042 Endoribonuclease L-PSP RG42_RS13065 PF08986 Domain of unknown function (DUF1889) RG42_RS13070 PF03701 Uncharacterised protein family (UPF0181) RG42_RS13075 PF00425 chorismate binding enzyme RG42_RS13075 PF04715 Anthranilate synthase component I, N terminal region RG42_RS13080 PF00293 NUDIX domain RG42_RS13085 PF03313 Serine dehydratase alpha chain RG42_RS13085 PF03315 Serine dehydratase beta chain RG42_RS13090 PF12792 CSS motif domain associated with EAL RG42_RS13090 PF00563 EAL domain RG42_RS13095 PF03471 Transporter associated domain RG42_RS13095 PF03741 Integral membrane protein TerC family RG42_RS13110 PF03830 PTS system sorbose subfamily IIB component RG42_RS13110 PF03610 PTS system fructose IIA component RG42_RS13115 PF03609 PTS system sorbose-specific iic component RG42_RS13120 PF03613 PTS system mannose/fructose/sorbose family IID component RG42_RS13125 PF06173 Protein of unknown function (DUF986) RG42_RS13135 PF02659 Putative manganese efflux pump RG42_RS13140 PF13847 Methyltransferase domain RG42_RS13145 PF00313 'Cold-shock' DNA-binding domain RG42_RS13150 PF10736 Protein of unknown function (DUF2627) RG42_RS13160 PF13974 YebO-like protein RG42_RS13165 PF13998 MgrB protein RG42_RS13170 PF13996 YobH-like protein RG42_RS13175 PF09339 IclR helix-turn-helix domain RG42_RS13175 PF01614 Bacterial transcriptional regulator RG42_RS13180 PF07690 Major Facilitator Superfamily RG42_RS13185 PF01435 Peptidase family M48 RG42_RS13190 PF11818 C-terminal domain of tail specific protease (DUF3340) RG42_RS13190 PF00595 PDZ domain RG42_RS13190 PF17804 Tail specific protease N-terminal domain RG42_RS13190 PF03572 Peptidase family S41 RG42_RS13195 PF04352 ProQ/FINO family RG42_RS13195 PF17516 ProQ C-terminal domain RG42_RS13200 PF13185 GAF domain RG42_RS13205 PF04403 Paraquat-inducible protein A RG42_RS13210 PF02470 MlaD protein RG42_RS13215 PF01189 16S rRNA methyltransferase RsmB/F RG42_RS13215 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF RG42_RS13215 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF RG42_RS13220 PF07351 Protein of unknown function (DUF1480) RG42_RS13225 PF07358 Protein of unknown function (DUF1482) RG42_RS13230 PF00149 Calcineurin-like phosphoesterase RG42_RS13240 PF10709 Protein of unknown function (DUF2511) RG42_RS13245 PF05425 Copper resistance protein D RG42_RS13250 PF04234 CopC domain RG42_RS13255 PF06440 DNA polymerase III, theta subunit RG42_RS13260 PF00795 Carbon-nitrogen hydrolase RG42_RS13265 PF00929 Exonuclease RG42_RS13270 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain RG42_RS13270 PF00326 Prolyl oligopeptidase family RG42_RS13280 PF04391 Protein of unknown function (DUF533) RG42_RS13295 PF13995 YebF-like protein RG42_RS13300 PF07130 YebG protein RG42_RS13305 PF02222 ATP-grasp domain RG42_RS13310 PF01081 KDPG and KHG aldolase RG42_RS13315 PF00920 Dehydratase family RG42_RS13320 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain RG42_RS13320 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain RG42_RS13335 PF01418 Helix-turn-helix domain, rpiR family RG42_RS13335 PF01380 SIS domain RG42_RS13340 PF00224 Pyruvate kinase, barrel domain RG42_RS13340 PF02887 Pyruvate kinase, alpha/beta domain RG42_RS13345 PF03279 Bacterial lipid A biosynthesis acyltransferase RG42_RS13350 PF01476 LysM domain RG42_RS13350 PF08525 Opacity-associated protein A N-terminal motif RG42_RS13350 PF01551 Peptidase family M23 RG42_RS13355 PF01297 Zinc-uptake complex component A periplasmic RG42_RS13360 PF00005 ABC transporter RG42_RS13365 PF00950 ABC 3 transport family RG42_RS13370 PF17864 RuvB AAA lid domain RG42_RS13370 PF05496 Holliday junction DNA helicase RuvB P-loop domain RG42_RS13370 PF05491 RuvB C-terminal winged helix domain RG42_RS13375 PF07499 RuvA, C-terminal domain RG42_RS13375 PF01330 RuvA N terminal domain RG42_RS13385 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family RG42_RS13390 PF02075 Crossover junction endodeoxyribonuclease RuvC RG42_RS13395 PF01709 Transcriptional regulator RG42_RS13400 PF00293 NUDIX domain RG42_RS13405 PF02938 GAD domain RG42_RS13405 PF01336 OB-fold nucleic acid binding domain RG42_RS13405 PF00152 tRNA synthetases class II (D, K and N) RG42_RS13410 PF00857 Isochorismatase family RG42_RS13415 PF01904 Protein of unknown function DUF72 RG42_RS13420 PF01124 MAPEG family RG42_RS13425 PF13649 Methyltransferase domain RG42_RS13430 PF08003 Protein of unknown function (DUF1698) RG42_RS13435 PF00384 Molybdopterin oxidoreductase RG42_RS13435 PF18364 Molybdopterin oxidoreductase N-terminal domain RG42_RS13435 PF01568 Molydopterin dinucleotide binding domain RG42_RS13440 PF03264 NapC/NirT cytochrome c family, N-terminal region RG42_RS13445 PF03932 CutC family RG42_RS13450 PF06185 YecM protein RG42_RS13460 PF05746 DALR anticodon binding domain RG42_RS13460 PF00750 tRNA synthetases class I (R) RG42_RS13460 PF03485 Arginyl tRNA synthetase N terminal domain RG42_RS13465 PF07007 Lysozyme inhibitor LprI RG42_RS13470 PF06366 Flagellar protein FlhE RG42_RS13475 PF00771 FHIPEP family RG42_RS13480 PF01312 FlhB HrpN YscU SpaS Family RG42_RS13485 PF04344 Chemotaxis phosphatase, CheZ RG42_RS13490 PF00072 Response regulator receiver domain RG42_RS13495 PF00072 Response regulator receiver domain RG42_RS13495 PF01339 CheB methylesterase RG42_RS13500 PF01739 CheR methyltransferase, SAM binding domain RG42_RS13500 PF03705 CheR methyltransferase, all-alpha domain RG42_RS13505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RG42_RS13505 PF00672 HAMP domain RG42_RS13505 PF02203 Tar ligand binding domain homologue RG42_RS13510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RG42_RS13510 PF00672 HAMP domain RG42_RS13510 PF02203 Tar ligand binding domain homologue RG42_RS13515 PF01584 CheW-like domain RG42_RS13520 PF02895 Signal transducing histidine kinase, homodimeric domain RG42_RS13520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG42_RS13520 PF01627 Hpt domain RG42_RS13520 PF01584 CheW-like domain RG42_RS13520 PF09078 CheY binding RG42_RS13525 PF13677 Membrane MotB of proton-channel complex MotA/MotB RG42_RS13525 PF00691 OmpA family RG42_RS13530 PF01618 MotA/TolQ/ExbB proton channel family RG42_RS13535 PF05280 Flagellar transcriptional activator (FlhC) RG42_RS13540 PF05247 Flagellar transcriptional activator (FlhD) RG42_RS13545 PF05247 Flagellar transcriptional activator (FlhD) RG42_RS13550 PF00582 Universal stress protein family RG42_RS13555 PF00982 Glycosyltransferase family 20 RG42_RS13560 PF02358 Trehalose-phosphatase RG42_RS13565 PF02653 Branched-chain amino acid transport system / permease component RG42_RS13570 PF00005 ABC transporter RG42_RS13575 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RG42_RS13585 PF00210 Ferritin-like domain RG42_RS13590 PF10964 Protein of unknown function (DUF2766) RG42_RS13600 PF13992 YecR-like lipoprotein RG42_RS13605 PF00210 Ferritin-like domain RG42_RS13610 PF10678 Protein of unknown function (DUF2492) RG42_RS13615 PF03222 Tryptophan/tyrosine permease family RG42_RS13620 PF03695 Uncharacterised protein family (UPF0149) RG42_RS13620 PF02810 SEC-C motif RG42_RS13640 PF01066 CDP-alcohol phosphatidyltransferase RG42_RS13645 PF02151 UvrB/uvrC motif RG42_RS13645 PF08459 UvrC Helix-hairpin-helix N-terminal RG42_RS13645 PF01541 GIY-YIG catalytic domain RG42_RS13650 PF00072 Response regulator receiver domain RG42_RS13650 PF00196 Bacterial regulatory proteins, luxR family RG42_RS13660 PF10769 Protein of unknown function (DUF2594) RG42_RS13665 PF00196 Bacterial regulatory proteins, luxR family RG42_RS13665 PF03472 Autoinducer binding domain RG42_RS13670 PF00005 ABC transporter RG42_RS13675 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS13680 PF00291 Pyridoxal-phosphate dependent enzyme RG42_RS13685 PF00497 Bacterial extracellular solute-binding proteins, family 3 RG42_RS13690 PF02899 Phage integrase, N-terminal SAM-like domain RG42_RS13695 PF04542 Sigma-70 region 2 RG42_RS13695 PF04539 Sigma-70 region 3 RG42_RS13695 PF04545 Sigma-70, region 4 RG42_RS13700 PF00700 Bacterial flagellin C-terminal helical region RG42_RS13700 PF08884 Flagellin D3 domain RG42_RS13700 PF00669 Bacterial flagellin N-terminal helical region RG42_RS13710 PF01527 Transposase RG42_RS13720 PF00665 Integrase core domain RG42_RS13725 PF05400 Flagellar protein FliT RG42_RS13730 PF02806 Alpha amylase, C-terminal all-beta domain RG42_RS13730 PF00128 Alpha amylase, catalytic domain RG42_RS13735 PF13987 YedD-like protein RG42_RS13745 PF04143 Sulphur transport RG42_RS13750 PF01206 Sulfurtransferase TusA RG42_RS13755 PF02586 SOS response associated peptidase (SRAP) RG42_RS13765 PF02049 Flagellar hook-basal body complex protein FliE RG42_RS13770 PF01514 Secretory protein of YscJ/FliF family RG42_RS13770 PF08345 Flagellar M-ring protein C-terminal RG42_RS13775 PF14841 FliG middle domain RG42_RS13775 PF01706 FliG C-terminal domain RG42_RS13775 PF14842 FliG N-terminal domain RG42_RS13780 PF02108 Flagellar assembly protein FliH RG42_RS13785 PF18269 T3SS EscN ATPase C-terminal domain RG42_RS13785 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RG42_RS13790 PF02050 Flagellar FliJ protein RG42_RS13795 PF02120 Flagellar hook-length control protein FliK RG42_RS13800 PF03748 Flagellar basal body-associated protein FliL RG42_RS13805 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term RG42_RS13805 PF02154 Flagellar motor switch protein FliM RG42_RS13810 PF16973 Flagellar motor switch protein FliN N-terminal RG42_RS13810 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term RG42_RS13815 PF04347 Flagellar biosynthesis protein, FliO RG42_RS13820 PF00813 FliP family RG42_RS13825 PF01313 Bacterial export proteins, family 3 RG42_RS13830 PF01311 Bacterial export proteins, family 1 RG42_RS13835 PF00196 Bacterial regulatory proteins, luxR family RG42_RS13840 PF10781 Dextransucrase DSRB RG42_RS13850 PF10733 Protein of unknown function (DUF2525) RG42_RS13860 PF17151 Periplasmic sensor domain RG42_RS13860 PF00990 Diguanylate cyclase, GGDEF domain RG42_RS13870 PF09926 Uncharacterized small protein (DUF2158) RG42_RS13875 PF05661 Protein of unknown function (DUF808) RG42_RS13880 PF00892 EamA-like transporter family RG42_RS13885 PF03852 DNA mismatch endonuclease Vsr RG42_RS13890 PF00145 C-5 cytosine-specific DNA methylase RG42_RS13890 PF18284 DNA methylase N-terminal domain RG42_RS13895 PF01966 HD domain RG42_RS13910 PF00267 Gram-negative porin RG42_RS13925 PF00512 His Kinase A (phospho-acceptor) domain RG42_RS13925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG42_RS13930 PF00072 Response regulator receiver domain RG42_RS13930 PF00486 Transcriptional regulatory protein, C terminal RG42_RS13935 PF00576 HIUase/Transthyretin family RG42_RS13940 PF00174 Oxidoreductase molybdopterin binding domain RG42_RS13945 PF01794 Ferric reductase like transmembrane component RG42_RS13950 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment RG42_RS13955 PF01292 Prokaryotic cytochrome b561 RG42_RS13970 PF06167 Glucose-regulated metallo-peptidase M90 RG42_RS13980 PF11924 Inverse autotransporter, beta-domain RG42_RS13980 PF02369 Bacterial Ig-like domain (group 1) RG42_RS13980 PF09134 Invasin, domain 3 RG42_RS13990 PF01527 Transposase RG42_RS14000 PF00665 Integrase core domain RG42_RS14005 PF02369 Bacterial Ig-like domain (group 1) RG42_RS14005 PF11924 Inverse autotransporter, beta-domain RG42_RS14005 PF09134 Invasin, domain 3 RG42_RS14015 PF05717 IS66 Orf2 like protein RG42_RS14020 PF13007 Transposase C of IS166 homeodomain RG42_RS14020 PF13005 zinc-finger binding domain of transposase IS66 RG42_RS14020 PF13817 IS66 C-terminal element RG42_RS14020 PF03050 Transposase IS66 family RG42_RS14030 PF07690 Major Facilitator Superfamily RG42_RS14030 PF00083 Sugar (and other) transporter RG42_RS14035 PF01048 Phosphorylase superfamily RG42_RS14035 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus RG42_RS14040 PF01709 Transcriptional regulator RG42_RS14055 PF01554 MatE RG42_RS14065 PF00589 Phage integrase family RG42_RS14065 PF13356 Arm DNA-binding domain RG42_RS14110 PF05593 RHS Repeat RG42_RS14110 PF15606 Bacterial toxin 34 RG42_RS14110 PF03527 RHS protein RG42_RS14125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG42_RS14125 PF03466 LysR substrate binding domain RG42_RS14130 PF03466 LysR substrate binding domain RG42_RS14130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG42_RS14140 PF17969 L,D-transpeptidase C-terminal domain RG42_RS14140 PF03734 L,D-transpeptidase catalytic domain RG42_RS14145 PF02277 Phosphoribosyltransferase RG42_RS14150 PF02654 Cobalamin-5-phosphate synthase RG42_RS14155 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase RG42_RS14160 PF01890 Cobalamin synthesis G C-terminus RG42_RS14160 PF11760 Cobalamin synthesis G N-terminal RG42_RS14160 PF11761 Cobalamin biosynthesis central region RG42_RS14165 PF12833 Helix-turn-helix domain RG42_RS14165 PF10114 Sensory domain found in PocR RG42_RS14170 PF00230 Major intrinsic protein RG42_RS14175 PF00936 BMC domain RG42_RS14180 PF00936 BMC domain RG42_RS14185 PF02286 Dehydratase large subunit RG42_RS14190 PF02288 Dehydratase medium subunit RG42_RS14195 PF02287 Dehydratase small subunit RG42_RS14200 PF08841 Diol dehydratase reactivase ATPase-like domain RG42_RS14200 PF18427 DD-reactivating factor swiveling domain RG42_RS14210 PF00936 BMC domain RG42_RS14215 PF00936 BMC domain RG42_RS14220 PF06130 Phosphate propanoyltransferase RG42_RS14230 PF03319 Ethanolamine utilisation protein EutN/carboxysome RG42_RS14235 PF01923 Cobalamin adenosyltransferase RG42_RS14240 PF00171 Aldehyde dehydrogenase family RG42_RS14245 PF00465 Iron-containing alcohol dehydrogenase RG42_RS14245 PF00171 Aldehyde dehydrogenase family RG42_RS14250 PF13237 4Fe-4S dicluster domain RG42_RS14250 PF13375 RnfC Barrel sandwich hybrid domain RG42_RS14250 PF10531 SLBB domain RG42_RS14250 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit RG42_RS14260 PF00936 BMC domain RG42_RS14265 PF10662 Ethanolamine utilisation - propanediol utilisation RG42_RS14270 PF04363 Protein of unknown function (DUF496) RG42_RS14275 PF04632 Fusaric acid resistance protein family RG42_RS14280 PF06445 GyrI-like small molecule binding domain RG42_RS14285 PF00768 D-alanyl-D-alanine carboxypeptidase RG42_RS14285 PF07943 Penicillin-binding protein 5, C-terminal domain RG42_RS14300 PF01527 Transposase RG42_RS14310 PF00665 Integrase core domain RG42_RS14340 PF00535 Glycosyl transferase family 2 RG42_RS14345 PF04138 GtrA-like protein RG42_RS14365 PF13356 Arm DNA-binding domain RG42_RS14365 PF00589 Phage integrase family RG42_RS14365 PF14659 Phage integrase, N-terminal SAM-like domain RG42_RS14370 PF00929 Exonuclease RG42_RS14370 PF08411 Exonuclease C-terminal RG42_RS14375 PF01206 Sulfurtransferase TusA RG42_RS14380 PF04143 Sulphur transport RG42_RS14385 PF13520 Amino acid permease RG42_RS14390 PF03466 LysR substrate binding domain RG42_RS14390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG42_RS14395 PF01370 NAD dependent epimerase/dehydratase family RG42_RS14400 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system RG42_RS14405 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system RG42_RS14420 PF01634 ATP phosphoribosyltransferase RG42_RS14420 PF08029 HisG, C-terminal domain RG42_RS14425 PF00815 Histidinol dehydrogenase RG42_RS14430 PF00155 Aminotransferase class I and II RG42_RS14435 PF00475 Imidazoleglycerol-phosphate dehydratase RG42_RS14440 PF00117 Glutamine amidotransferase class-I RG42_RS14445 PF00977 Histidine biosynthesis protein RG42_RS14450 PF00977 Histidine biosynthesis protein RG42_RS14455 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase RG42_RS14455 PF01502 Phosphoribosyl-AMP cyclohydrolase RG42_RS14460 PF00132 Bacterial transferase hexapeptide (six repeats) RG42_RS14465 PF02706 Chain length determinant protein RG42_RS14470 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RG42_RS14470 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RG42_RS14470 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RG42_RS14475 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain RG42_RS14475 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RG42_RS14485 PF03275 UDP-galactopyranose mutase RG42_RS14490 PF00535 Glycosyl transferase family 2 RG42_RS14495 PF13439 Glycosyltransferase Family 4 RG42_RS14495 PF00534 Glycosyl transferases group 1 RG42_RS14505 PF00535 Glycosyl transferase family 2 RG42_RS14510 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RG42_RS14520 PF00483 Nucleotidyl transferase RG42_RS14525 PF16363 GDP-mannose 4,6 dehydratase RG42_RS14535 PF00483 Nucleotidyl transferase RG42_RS14545 PF13439 Glycosyltransferase Family 4 RG42_RS14545 PF00534 Glycosyl transferases group 1 RG42_RS14550 PF04230 Polysaccharide pyruvyl transferase RG42_RS14560 PF02397 Bacterial sugar transferase RG42_RS14565 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RG42_RS14565 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RG42_RS14565 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RG42_RS14565 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RG42_RS14570 PF00483 Nucleotidyl transferase RG42_RS14570 PF01050 Mannose-6-phosphate isomerase RG42_RS14575 PF00534 Glycosyl transferases group 1 RG42_RS14575 PF13579 Glycosyl transferase 4-like domain RG42_RS14580 PF00293 NUDIX domain RG42_RS14585 PF01370 NAD dependent epimerase/dehydratase family RG42_RS14590 PF16363 GDP-mannose 4,6 dehydratase RG42_RS14595 PF00132 Bacterial transferase hexapeptide (six repeats) RG42_RS14600 PF00535 Glycosyl transferase family 2 RG42_RS14610 PF00534 Glycosyl transferases group 1 RG42_RS14610 PF13439 Glycosyltransferase Family 4 RG42_RS14615 PF00132 Bacterial transferase hexapeptide (six repeats) RG42_RS14620 PF00535 Glycosyl transferase family 2 RG42_RS14625 PF13614 AAA domain RG42_RS14625 PF13807 G-rich domain on putative tyrosine kinase RG42_RS14625 PF02706 Chain length determinant protein RG42_RS14630 PF01451 Low molecular weight phosphotyrosine protein phosphatase RG42_RS14635 PF02563 Polysaccharide biosynthesis/export protein RG42_RS14635 PF10531 SLBB domain RG42_RS14635 PF18412 Outer-membrane lipoprotein Wza C-terminal domain RG42_RS14640 PF03741 Integral membrane protein TerC family RG42_RS14640 PF00571 CBS domain RG42_RS14640 PF03471 Transporter associated domain RG42_RS14650 PF05170 AsmA family RG42_RS14655 PF00692 dUTPase RG42_RS14660 PF00485 Phosphoribulokinase / Uridine kinase family RG42_RS14665 PF00990 Diguanylate cyclase, GGDEF domain RG42_RS14665 PF00563 EAL domain RG42_RS14665 PF05231 MASE1 RG42_RS14665 PF13426 PAS domain RG42_RS14665 PF08447 PAS fold RG42_RS14665 PF08448 PAS fold RG42_RS14670 PF06029 AlkA N-terminal domain RG42_RS14670 PF00730 HhH-GPD superfamily base excision DNA repair protein RG42_RS14675 PF00012 Hsp70 protein RG42_RS14685 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) RG42_RS14695 PF00092 von Willebrand factor type A domain RG42_RS14710 PF13533 Biotin-lipoyl like RG42_RS14715 PF00873 AcrB/AcrD/AcrF family RG42_RS14720 PF00873 AcrB/AcrD/AcrF family RG42_RS14725 PF07690 Major Facilitator Superfamily RG42_RS14730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG42_RS14730 PF00672 HAMP domain RG42_RS14730 PF00512 His Kinase A (phospho-acceptor) domain RG42_RS14735 PF00486 Transcriptional regulatory protein, C terminal RG42_RS14735 PF00072 Response regulator receiver domain RG42_RS14745 PF07411 Domain of unknown function (DUF1508) RG42_RS14750 PF01136 Peptidase family U32 RG42_RS14750 PF16325 Peptidase family U32 C-terminal domain RG42_RS14765 PF00781 Diacylglycerol kinase catalytic domain RG42_RS14770 PF13419 Haloacid dehalogenase-like hydrolase RG42_RS14775 PF07690 Major Facilitator Superfamily RG42_RS14780 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RG42_RS14780 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RG42_RS14785 PF08125 Mannitol dehydrogenase C-terminal domain RG42_RS14785 PF01232 Mannitol dehydrogenase Rossmann domain RG42_RS14790 PF04198 Putative sugar-binding domain RG42_RS14795 PF00356 Bacterial regulatory proteins, lacI family RG42_RS14800 PF00106 short chain dehydrogenase RG42_RS14805 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RG42_RS14805 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RG42_RS14810 PF07690 Major Facilitator Superfamily RG42_RS14815 PF01791 DeoC/LacD family aldolase RG42_RS14820 PF03825 Nucleoside H+ symporter RG42_RS14825 PF03747 ADP-ribosylglycohydrolase RG42_RS14830 PF00294 pfkB family carbohydrate kinase RG42_RS14835 PF07702 UTRA domain RG42_RS14835 PF00392 Bacterial regulatory proteins, gntR family RG42_RS14840 PF01183 Glycosyl hydrolases family 25 RG42_RS14845 PF08543 Phosphomethylpyrimidine kinase RG42_RS14850 PF02110 Hydroxyethylthiazole kinase family RG42_RS14855 PF02583 Metal-sensitive transcriptional repressor RG42_RS14860 PF03824 High-affinity nickel-transport protein RG42_RS14865 PF11776 Nickel/cobalt transporter regulator RG42_RS14870 PF00419 Fimbrial protein RG42_RS14875 PF00577 Outer membrane usher protein RG42_RS14875 PF13954 PapC N-terminal domain RG42_RS14875 PF13953 PapC C-terminal domain RG42_RS14880 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RG42_RS14880 PF02753 Pili assembly chaperone PapD, C-terminal domain RG42_RS14885 PF00419 Fimbrial protein RG42_RS14895 PF10836 Protein of unknown function (DUF2574) RG42_RS14900 PF10609 NUBPL iron-transfer P-loop NTPase RG42_RS14905 PF09334 tRNA synthetases class I (M) RG42_RS14905 PF01588 Putative tRNA binding domain RG42_RS14915 PF13569 Domain of unknown function (DUF4132) RG42_RS14925 PF07728 AAA domain (dynein-related subfamily) RG42_RS14935 PF05762 VWA domain containing CoxE-like protein RG42_RS14940 PF04434 SWIM zinc finger RG42_RS14945 PF06998 Protein of unknown function (DUF1307) RG42_RS14950 PF07308 Protein of unknown function (DUF1456) RG42_RS14955 PF00072 Response regulator receiver domain RG42_RS14955 PF04397 LytTr DNA-binding domain RG42_RS14960 PF06580 Histidine kinase RG42_RS14960 PF07694 5TMR of 5TMR-LYT RG42_RS14965 PF13411 MerR HTH family regulatory protein RG42_RS14975 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS14980 PF00005 ABC transporter RG42_RS14985 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS14990 PF04069 Substrate binding domain of ABC-type glycine betaine transport system RG42_RS14995 PF00933 Glycosyl hydrolase family 3 N terminal domain RG42_RS14995 PF01915 Glycosyl hydrolase family 3 C-terminal domain RG42_RS14995 PF14310 Fibronectin type III-like domain RG42_RS15000 PF01565 FAD binding domain RG42_RS15000 PF09330 D-lactate dehydrogenase, membrane binding RG42_RS15005 PF00768 D-alanyl-D-alanine carboxypeptidase RG42_RS15010 PF04893 Yip1 domain RG42_RS15015 PF09335 SNARE associated Golgi protein RG42_RS15025 PF02321 Outer membrane efflux protein RG42_RS15045 PF01207 Dihydrouridine synthase (Dus) RG42_RS15050 PF03788 LrgA family RG42_RS15055 PF04172 LrgB-like family RG42_RS15060 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region RG42_RS15060 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RG42_RS15065 PF02698 DUF218 domain RG42_RS15070 PF10808 Protein of unknown function (DUF2542) RG42_RS15075 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG42_RS15075 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RG42_RS15080 PF01180 Dihydroorotate dehydrogenase RG42_RS15085 PF02653 Branched-chain amino acid transport system / permease component RG42_RS15090 PF00005 ABC transporter RG42_RS15095 PF13407 Periplasmic binding protein domain RG42_RS15100 PF00356 Bacterial regulatory proteins, lacI family RG42_RS15110 PF04235 Protein of unknown function (DUF418) RG42_RS15115 PF01227 GTP cyclohydrolase I RG42_RS15125 PF00756 Putative esterase RG42_RS15130 PF07715 TonB-dependent Receptor Plug Domain RG42_RS15130 PF00593 TonB dependent receptor RG42_RS15135 PF00324 Amino acid permease RG42_RS15145 PF03466 LysR substrate binding domain RG42_RS15145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG42_RS15150 PF03601 Conserved hypothetical protein 698 RG42_RS15155 PF01261 Xylose isomerase-like TIM barrel RG42_RS15160 PF00294 pfkB family carbohydrate kinase RG42_RS15165 PF07662 Na+ dependent nucleoside transporter C-terminus RG42_RS15165 PF01773 Na+ dependent nucleoside transporter N-terminus RG42_RS15170 PF01156 Inosine-uridine preferring nucleoside hydrolase RG42_RS15180 PF01773 Na+ dependent nucleoside transporter N-terminus RG42_RS15180 PF07662 Na+ dependent nucleoside transporter C-terminus RG42_RS15185 PF04227 Indigoidine synthase A like protein RG42_RS15190 PF00294 pfkB family carbohydrate kinase RG42_RS15195 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RG42_RS15195 PF02378 Phosphotransferase system, EIIC RG42_RS15200 PF00294 pfkB family carbohydrate kinase RG42_RS15205 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RG42_RS15205 PF00381 PTS HPr component phosphorylation site RG42_RS15210 PF07690 Major Facilitator Superfamily RG42_RS15215 PF03692 Putative zinc- or iron-chelating domain RG42_RS15220 PF09285 Elongation factor P, C-terminal RG42_RS15220 PF01132 Elongation factor P (EF-P) OB domain RG42_RS15220 PF08207 Elongation factor P (EF-P) KOW-like domain RG42_RS15225 PF01232 Mannitol dehydrogenase Rossmann domain RG42_RS15225 PF08125 Mannitol dehydrogenase C-terminal domain RG42_RS15230 PF02492 CobW/HypB/UreG, nucleotide-binding domain RG42_RS15230 PF07683 Cobalamin synthesis protein cobW C-terminal domain RG42_RS15235 PF01569 PAP2 superfamily RG42_RS15240 PF00877 NlpC/P60 family RG42_RS15245 PF00563 EAL domain RG42_RS15245 PF12792 CSS motif domain associated with EAL RG42_RS15250 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RG42_RS15255 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS15260 PF12911 N-terminal TM domain of oligopeptide transport permease C RG42_RS15260 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS15265 PF00005 ABC transporter RG42_RS15265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RG42_RS15270 PF13989 YejG-like protein RG42_RS15280 PF07690 Major Facilitator Superfamily RG42_RS15285 PF01479 S4 domain RG42_RS15285 PF00849 RNA pseudouridylate synthase RG42_RS15295 PF00271 Helicase conserved C-terminal domain RG42_RS15295 PF04851 Type III restriction enzyme, res subunit RG42_RS15300 PF01386 Ribosomal L25p family RG42_RS15305 PF04245 37-kD nucleoid-associated bacterial protein RG42_RS15310 PF07208 Protein of unknown function (DUF1414) RG42_RS15315 PF00884 Sulfatase RG42_RS15315 PF11893 Domain of unknown function (DUF3413) RG42_RS15330 PF16168 Adhesin of bacterial autotransporter system, probable stalk RG42_RS15330 PF03797 Autotransporter beta-domain RG42_RS15330 PF03212 Pertactin RG42_RS15340 PF00072 Response regulator receiver domain RG42_RS15340 PF00196 Bacterial regulatory proteins, luxR family RG42_RS15345 PF03918 Cytochrome C biogenesis protein RG42_RS15350 PF08534 Redoxin RG42_RS15355 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal RG42_RS15355 PF01578 Cytochrome C assembly protein RG42_RS15360 PF03100 CcmE RG42_RS15365 PF04995 Heme exporter protein D (CcmD) RG42_RS15370 PF01578 Cytochrome C assembly protein RG42_RS15375 PF03379 CcmB protein RG42_RS15380 PF00005 ABC transporter RG42_RS15385 PF03264 NapC/NirT cytochrome c family, N-terminal region RG42_RS15390 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) RG42_RS15395 PF13237 4Fe-4S dicluster domain RG42_RS15395 PF12801 4Fe-4S binding domain RG42_RS15400 PF12838 4Fe-4S dicluster domain RG42_RS15400 PF12800 4Fe-4S binding domain RG42_RS15405 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RG42_RS15405 PF00384 Molybdopterin oxidoreductase RG42_RS15405 PF01568 Molydopterin dinucleotide binding domain RG42_RS15410 PF03927 NapD protein RG42_RS15415 PF13187 4Fe-4S dicluster domain RG42_RS15415 PF00037 4Fe-4S binding domain RG42_RS15415 PF12800 4Fe-4S binding domain RG42_RS15425 PF03974 Ecotin RG42_RS15430 PF06039 Malate:quinone oxidoreductase (Mqo) RG42_RS15435 PF00005 ABC transporter RG42_RS15440 PF13532 2OG-Fe(II) oxygenase superfamily RG42_RS15445 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RG42_RS15445 PF12833 Helix-turn-helix domain RG42_RS15445 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RG42_RS15445 PF02805 Metal binding domain of Ada RG42_RS15450 PF02424 ApbE family RG42_RS15455 PF00267 Gram-negative porin RG42_RS15470 PF01627 Hpt domain RG42_RS15470 PF16359 RcsD-ABL domain RG42_RS15470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG42_RS15475 PF00196 Bacterial regulatory proteins, luxR family RG42_RS15475 PF00072 Response regulator receiver domain RG42_RS15485 PF09456 RcsC Alpha-Beta-Loop (ABL) RG42_RS15485 PF00512 His Kinase A (phospho-acceptor) domain RG42_RS15485 PF00072 Response regulator receiver domain RG42_RS15485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG42_RS15490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG42_RS15490 PF00989 PAS fold RG42_RS15490 PF00512 His Kinase A (phospho-acceptor) domain RG42_RS15495 PF00158 Sigma-54 interaction domain RG42_RS15495 PF02954 Bacterial regulatory protein, Fis family RG42_RS15495 PF00072 Response regulator receiver domain RG42_RS15500 PF01144 Coenzyme A transferase RG42_RS15505 PF01144 Coenzyme A transferase RG42_RS15510 PF02667 Short chain fatty acid transporter RG42_RS15515 PF00108 Thiolase, N-terminal domain RG42_RS15515 PF02803 Thiolase, C-terminal domain RG42_RS15520 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) RG42_RS15525 PF10062 Predicted secreted protein (DUF2300) RG42_RS15525 PF08486 Stage II sporulation protein RG42_RS15530 PF00207 Alpha-2-macroglobulin family RG42_RS15530 PF07703 Alpha-2-macroglobulin bait region domain RG42_RS15530 PF01835 MG2 domain RG42_RS15535 PF06672 Protein of unknown function (DUF1175) RG42_RS15540 PF09909 Uncharacterized protein conserved in bacteria (DUF2138) RG42_RS15545 PF00521 DNA gyrase/topoisomerase IV, subunit A RG42_RS15545 PF03989 DNA gyrase C-terminal domain, beta-propeller RG42_RS15555 PF03797 Autotransporter beta-domain RG42_RS15555 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat RG42_RS15555 PF12951 Passenger-associated-transport-repeat RG42_RS15565 PF03477 ATP cone domain RG42_RS15565 PF02867 Ribonucleotide reductase, barrel domain RG42_RS15565 PF00317 Ribonucleotide reductase, all-alpha domain RG42_RS15575 PF00268 Ribonucleotide reductase, small chain RG42_RS15580 PF00111 2Fe-2S iron-sulfur cluster binding domain RG42_RS15595 PF05717 IS66 Orf2 like protein RG42_RS15600 PF03050 Transposase IS66 family RG42_RS15600 PF13817 IS66 C-terminal element RG42_RS15600 PF13007 Transposase C of IS166 homeodomain RG42_RS15600 PF13005 zinc-finger binding domain of transposase IS66 RG42_RS15615 PF03009 Glycerophosphoryl diester phosphodiesterase family RG42_RS15620 PF07690 Major Facilitator Superfamily RG42_RS15625 PF01266 FAD dependent oxidoreductase RG42_RS15625 PF04324 BFD-like [2Fe-2S] binding domain RG42_RS15630 PF00890 FAD binding domain RG42_RS15635 PF13183 4Fe-4S dicluster domain RG42_RS15635 PF02754 Cysteine-rich domain RG42_RS15640 PF04754 Putative transposase, YhgA-like RG42_RS15650 PF03328 HpcH/HpaI aldolase/citrate lyase family RG42_RS15655 PF07690 Major Facilitator Superfamily RG42_RS15660 PF13378 Enolase C-terminal domain-like RG42_RS15660 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RG42_RS15665 PF01614 Bacterial transcriptional regulator RG42_RS15665 PF09339 IclR helix-turn-helix domain RG42_RS15670 PF00994 Probable molybdopterin binding domain RG42_RS15675 PF07437 YfaZ precursor RG42_RS15680 PF00293 NUDIX domain RG42_RS15685 PF00300 Histidine phosphatase superfamily (branch 1) RG42_RS15690 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RG42_RS15695 PF00535 Glycosyl transferase family 2 RG42_RS15700 PF00551 Formyl transferase RG42_RS15700 PF01370 NAD dependent epimerase/dehydratase family RG42_RS15700 PF02911 Formyl transferase, C-terminal domain RG42_RS15705 PF01522 Polysaccharide deacetylase RG42_RS15710 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase RG42_RS15715 PF00892 EamA-like transporter family RG42_RS15730 PF00501 AMP-binding enzyme RG42_RS15730 PF13193 AMP-binding enzyme C-terminal domain RG42_RS15735 PF13378 Enolase C-terminal domain-like RG42_RS15740 PF00378 Enoyl-CoA hydratase/isomerase RG42_RS15745 PF12697 Alpha/beta hydrolase family RG42_RS15750 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RG42_RS15750 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RG42_RS15750 PF16582 Middle domain of thiamine pyrophosphate RG42_RS15755 PF00425 chorismate binding enzyme RG42_RS15760 PF05957 Bacterial protein of unknown function (DUF883) RG42_RS15765 PF13673 Acetyltransferase (GNAT) domain RG42_RS15770 PF12706 Beta-lactamase superfamily domain RG42_RS15775 PF02902 Ulp1 protease family, C-terminal catalytic domain RG42_RS15780 PF00092 von Willebrand factor type A domain RG42_RS15780 PF12450 von Willebrand factor RG42_RS15780 PF12034 Domain of unknown function (DUF3520) RG42_RS15785 PF04389 Peptidase family M28 RG42_RS15790 PF08974 Domain of unknown function (DUF1877) RG42_RS15815 PF00361 Proton-conducting membrane transporter RG42_RS15820 PF00361 Proton-conducting membrane transporter RG42_RS15825 PF00361 Proton-conducting membrane transporter RG42_RS15825 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RG42_RS15830 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RG42_RS15835 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 RG42_RS15840 PF12838 4Fe-4S dicluster domain RG42_RS15845 PF00146 NADH dehydrogenase RG42_RS15850 PF01568 Molydopterin dinucleotide binding domain RG42_RS15850 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RG42_RS15850 PF00384 Molybdopterin oxidoreductase RG42_RS15850 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RG42_RS15855 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RG42_RS15855 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit RG42_RS15855 PF10531 SLBB domain RG42_RS15865 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit RG42_RS15865 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit RG42_RS15870 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RG42_RS15875 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 RG42_RS15880 PF03466 LysR substrate binding domain RG42_RS15880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG42_RS15890 PF00155 Aminotransferase class I and II RG42_RS15900 PF02080 TrkA-C domain RG42_RS15900 PF03600 Citrate transporter RG42_RS15905 PF13419 Haloacid dehalogenase-like hydrolase RG42_RS15910 PF03887 YfbU domain RG42_RS15915 PF04217 Protein of unknown function, DUF412 RG42_RS15925 PF00871 Acetokinase family RG42_RS15930 PF07085 DRTGG domain RG42_RS15930 PF01515 Phosphate acetyl/butaryl transferase RG42_RS15935 PF03606 C4-dicarboxylate anaerobic carrier RG42_RS15940 PF00293 NUDIX domain RG42_RS15945 PF12850 Calcineurin-like phosphoesterase superfamily domain RG42_RS15950 PF14834 Glutathione S-transferase, C-terminal domain RG42_RS15950 PF02798 Glutathione S-transferase, N-terminal domain RG42_RS15955 PF02798 Glutathione S-transferase, N-terminal domain RG42_RS15955 PF00043 Glutathione S-transferase, C-terminal domain RG42_RS15960 PF02152 Dihydroneopterin aldolase RG42_RS15965 PF08338 Domain of unknown function (DUF1731) RG42_RS15965 PF01370 NAD dependent epimerase/dehydratase family RG42_RS15970 PF04754 Putative transposase, YhgA-like RG42_RS15975 PF00005 ABC transporter RG42_RS15980 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS15985 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS15990 PF00497 Bacterial extracellular solute-binding proteins, family 3 RG42_RS15995 PF00497 Bacterial extracellular solute-binding proteins, family 3 RG42_RS16000 PF02441 Flavoprotein RG42_RS16005 PF00156 Phosphoribosyl transferase domain RG42_RS16010 PF02674 Colicin V production protein RG42_RS16015 PF05036 Sporulation related domain RG42_RS16020 PF08245 Mur ligase middle domain RG42_RS16020 PF02875 Mur ligase family, glutamate ligase domain RG42_RS16025 PF01039 Carboxyl transferase domain RG42_RS16025 PF17848 Acetyl-coA carboxylase zinc finger domain RG42_RS16030 PF09335 SNARE associated Golgi protein RG42_RS16035 PF01416 tRNA pseudouridine synthase RG42_RS16040 PF02774 Semialdehyde dehydrogenase, dimerisation domain RG42_RS16040 PF01118 Semialdehyde dehydrogenase, NAD binding domain RG42_RS16045 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RG42_RS16045 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RG42_RS16045 PF11890 Domain of unknown function (DUF3410) RG42_RS16055 PF07690 Major Facilitator Superfamily RG42_RS16065 PF02801 Beta-ketoacyl synthase, C-terminal domain RG42_RS16065 PF00109 Beta-ketoacyl synthase, N-terminal domain RG42_RS16070 PF01266 FAD dependent oxidoreductase RG42_RS16070 PF05430 S-adenosyl-L-methionine-dependent methyltransferase RG42_RS16075 PF08891 YfcL protein RG42_RS16080 PF04315 Elongation factor P hydroxylase RG42_RS16085 PF01925 Sulfite exporter TauE/SafE RG42_RS16090 PF03411 Penicillin-insensitive murein endopeptidase RG42_RS16095 PF01264 Chorismate synthase RG42_RS16100 PF05175 Methyltransferase small domain RG42_RS16105 PF01713 Smr domain RG42_RS16110 PF11245 Protein of unknown function (DUF2544) RG42_RS16115 PF00419 Fimbrial protein RG42_RS16120 PF00419 Fimbrial protein RG42_RS16125 PF00419 Fimbrial protein RG42_RS16130 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RG42_RS16130 PF02753 Pili assembly chaperone PapD, C-terminal domain RG42_RS16135 PF13954 PapC N-terminal domain RG42_RS16135 PF13953 PapC C-terminal domain RG42_RS16135 PF00577 Outer membrane usher protein RG42_RS16140 PF00419 Fimbrial protein RG42_RS16145 PF00300 Histidine phosphatase superfamily (branch 1) RG42_RS16150 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RG42_RS16150 PF00378 Enoyl-CoA hydratase/isomerase RG42_RS16150 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RG42_RS16155 PF02803 Thiolase, C-terminal domain RG42_RS16155 PF00108 Thiolase, N-terminal domain RG42_RS16160 PF04175 Protein of unknown function (DUF406) RG42_RS16170 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) RG42_RS16185 PF04333 MlaA lipoprotein RG42_RS16190 PF01226 Formate/nitrite transporter RG42_RS16200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG42_RS16200 PF03466 LysR substrate binding domain RG42_RS16205 PF02447 GntP family permease RG42_RS16210 PF00291 Pyridoxal-phosphate dependent enzyme RG42_RS16215 PF07690 Major Facilitator Superfamily RG42_RS16220 PF00529 HlyD membrane-fusion protein of T1SS RG42_RS16220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RG42_RS16225 PF00196 Bacterial regulatory proteins, luxR family RG42_RS16225 PF00072 Response regulator receiver domain RG42_RS16230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG42_RS16230 PF00512 His Kinase A (phospho-acceptor) domain RG42_RS16230 PF00072 Response regulator receiver domain RG42_RS16230 PF00497 Bacterial extracellular solute-binding proteins, family 3 RG42_RS16230 PF01627 Hpt domain RG42_RS16235 PF02515 CoA-transferase family III RG42_RS16240 PF03547 Membrane transport protein RG42_RS16245 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RG42_RS16245 PF00205 Thiamine pyrophosphate enzyme, central domain RG42_RS16245 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RG42_RS16250 PF02515 CoA-transferase family III RG42_RS16255 PF10938 YfdX protein RG42_RS16270 PF10810 Protein of unknown function (DUF2545) RG42_RS16275 PF03279 Bacterial lipid A biosynthesis acyltransferase RG42_RS16285 PF00155 Aminotransferase class I and II RG42_RS16290 PF06580 Histidine kinase RG42_RS16290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG42_RS16290 PF07694 5TMR of 5TMR-LYT RG42_RS16295 PF04397 LytTr DNA-binding domain RG42_RS16295 PF00072 Response regulator receiver domain RG42_RS16300 PF12833 Helix-turn-helix domain RG42_RS16305 PF00381 PTS HPr component phosphorylation site RG42_RS16305 PF02896 PEP-utilising enzyme, TIM barrel domain RG42_RS16305 PF00391 PEP-utilising enzyme, mobile domain RG42_RS16305 PF05524 PEP-utilising enzyme, N-terminal RG42_RS16305 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RG42_RS16310 PF05343 M42 glutamyl aminopeptidase RG42_RS16315 PF01321 Creatinase/Prolidase N-terminal domain RG42_RS16315 PF00557 Metallopeptidase family M24 RG42_RS16320 PF02378 Phosphotransferase system, EIIC RG42_RS16325 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RG42_RS16330 PF02685 Glucokinase RG42_RS16335 PF00654 Voltage gated chloride channel RG42_RS16340 PF10697 Protein of unknown function (DUF2502) RG42_RS16350 PF01566 Natural resistance-associated macrophage protein RG42_RS16355 PF07670 Nucleoside recognition RG42_RS16355 PF07662 Na+ dependent nucleoside transporter C-terminus RG42_RS16355 PF01773 Na+ dependent nucleoside transporter N-terminus RG42_RS16360 PF05231 MASE1 RG42_RS16360 PF00563 EAL domain RG42_RS16375 PF07037 Putative transcription regulator (DUF1323) RG42_RS16380 PF07037 Putative transcription regulator (DUF1323) RG42_RS16385 PF00749 tRNA synthetases class I (E and Q), catalytic domain RG42_RS16415 PF03466 LysR substrate binding domain RG42_RS16415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG42_RS16425 PF03825 Nucleoside H+ symporter RG42_RS16430 PF01048 Phosphorylase superfamily RG42_RS16435 PF03502 Nucleoside-specific channel-forming protein, Tsx RG42_RS16440 PF03466 LysR substrate binding domain RG42_RS16440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG42_RS16445 PF13593 SBF-like CPA transporter family (DUF4137) RG42_RS16450 PF12843 Putative quorum-sensing-regulated virulence factor RG42_RS16455 PF03119 NAD-dependent DNA ligase C4 zinc finger domain RG42_RS16455 PF03120 NAD-dependent DNA ligase OB-fold domain RG42_RS16455 PF01653 NAD-dependent DNA ligase adenylation domain RG42_RS16455 PF12826 Helix-hairpin-helix motif RG42_RS16455 PF00533 BRCA1 C Terminus (BRCT) domain RG42_RS16460 PF04354 ZipA, C-terminal FtsZ-binding domain RG42_RS16475 PF00291 Pyridoxal-phosphate dependent enzyme RG42_RS16480 PF00381 PTS HPr component phosphorylation site RG42_RS16485 PF05524 PEP-utilising enzyme, N-terminal RG42_RS16485 PF02896 PEP-utilising enzyme, TIM barrel domain RG42_RS16485 PF00391 PEP-utilising enzyme, mobile domain RG42_RS16490 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RG42_RS16495 PF08543 Phosphomethylpyrimidine kinase RG42_RS16500 PF17263 Family of unknown function (DUF5329) RG42_RS16505 PF05406 WGR domain RG42_RS16510 PF00291 Pyridoxal-phosphate dependent enzyme RG42_RS16515 PF00005 ABC transporter RG42_RS16520 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS16525 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS16540 PF01418 Helix-turn-helix domain, rpiR family RG42_RS16540 PF01380 SIS domain RG42_RS16545 PF01380 SIS domain RG42_RS16550 PF02378 Phosphotransferase system, EIIC RG42_RS16550 PF00367 phosphotransferase system, EIIB RG42_RS16555 PF00144 Beta-lactamase RG42_RS16560 PF04261 Dyp-type peroxidase family RG42_RS16565 PF06572 Protein of unknown function (DUF1131) RG42_RS16570 PF11143 Protein of unknown function (DUF2919) RG42_RS16575 PF00583 Acetyltransferase (GNAT) family RG42_RS16580 PF01520 N-acetylmuramoyl-L-alanine amidase RG42_RS16585 PF01218 Coproporphyrinogen III oxidase RG42_RS16590 PF12833 Helix-turn-helix domain RG42_RS16595 PF16365 Ethanolamine utilization protein EutK C-terminus RG42_RS16595 PF00936 BMC domain RG42_RS16600 PF00936 BMC domain RG42_RS16605 PF05985 Ethanolamine ammonia-lyase light chain (EutC) RG42_RS16610 PF06751 Ethanolamine ammonia lyase large subunit (EutB) RG42_RS16615 PF06277 Ethanolamine utilisation protein EutA RG42_RS16620 PF04346 Ethanolamine utilisation protein, EutH RG42_RS16625 PF00465 Iron-containing alcohol dehydrogenase RG42_RS16635 PF00171 Aldehyde dehydrogenase family RG42_RS16640 PF03319 Ethanolamine utilisation protein EutN/carboxysome RG42_RS16645 PF00936 BMC domain RG42_RS16650 PF01515 Phosphate acetyl/butaryl transferase RG42_RS16655 PF01923 Cobalamin adenosyltransferase RG42_RS16660 PF06249 Ethanolamine utilisation protein EutQ RG42_RS16665 PF10662 Ethanolamine utilisation - propanediol utilisation RG42_RS16670 PF00936 BMC domain RG42_RS16675 PF01515 Phosphate acetyl/butaryl transferase RG42_RS16675 PF03949 Malic enzyme, NAD binding domain RG42_RS16675 PF00390 Malic enzyme, N-terminal domain RG42_RS16680 PF00923 Transaldolase/Fructose-6-phosphate aldolase RG42_RS16685 PF02780 Transketolase, C-terminal domain RG42_RS16685 PF02779 Transketolase, pyrimidine binding domain RG42_RS16685 PF00456 Transketolase, thiamine diphosphate binding domain RG42_RS16690 PF06674 Protein of unknown function (DUF1176) RG42_RS16695 PF00293 NUDIX domain RG42_RS16700 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RG42_RS16700 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG42_RS16700 PF13247 4Fe-4S dicluster domain RG42_RS16705 PF07730 Histidine kinase RG42_RS16705 PF00672 HAMP domain RG42_RS16705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG42_RS16705 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term RG42_RS16710 PF00873 AcrB/AcrD/AcrF family RG42_RS16720 PF03960 ArsC family RG42_RS16725 PF07687 Peptidase dimerisation domain RG42_RS16725 PF01546 Peptidase family M20/M25/M40 RG42_RS16730 PF13980 Uncharacterised protein family (UPF0370) RG42_RS16735 PF02230 Phospholipase/Carboxylesterase RG42_RS16740 PF13718 GNAT acetyltransferase 2 RG42_RS16740 PF05127 Helicase RG42_RS16740 PF17176 tRNA-binding domain RG42_RS16740 PF08351 Domain of unknown function (DUF1726) RG42_RS16745 PF04228 Putative neutral zinc metallopeptidase RG42_RS16750 PF01259 SAICAR synthetase RG42_RS16760 PF06804 NlpB/DapX lipoprotein RG42_RS16765 PF00701 Dihydrodipicolinate synthetase family RG42_RS16770 PF01842 ACT domain RG42_RS16775 PF00578 AhpC/TSA family RG42_RS16780 PF00037 4Fe-4S binding domain RG42_RS16780 PF12798 4Fe-4S binding domain RG42_RS16785 PF00361 Proton-conducting membrane transporter RG42_RS16790 PF00146 NADH dehydrogenase RG42_RS16795 PF00361 Proton-conducting membrane transporter RG42_RS16795 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RG42_RS16800 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RG42_RS16805 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RG42_RS16805 PF00361 Proton-conducting membrane transporter RG42_RS16810 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit RG42_RS16810 PF00374 Nickel-dependent hydrogenase RG42_RS16810 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit RG42_RS16815 PF12838 4Fe-4S dicluster domain RG42_RS16820 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RG42_RS16825 PF07450 Formate hydrogenlyase maturation protein HycH RG42_RS16830 PF01590 GAF domain RG42_RS16830 PF00158 Sigma-54 interaction domain RG42_RS16835 PF01226 Formate/nitrite transporter RG42_RS16840 PF01594 AI-2E family transporter RG42_RS16845 PF01435 Peptidase family M48 RG42_RS16850 PF03960 ArsC family RG42_RS16855 PF00308 Bacterial dnaA protein RG42_RS16860 PF00860 Permease family RG42_RS16875 PF02769 AIR synthase related protein, C-terminal domain RG42_RS16875 PF00586 AIR synthase related protein, N-terminal domain RG42_RS16880 PF00551 Formyl transferase RG42_RS16885 PF02503 Polyphosphate kinase middle domain RG42_RS16885 PF13089 Polyphosphate kinase N-terminal domain RG42_RS16885 PF17941 Polyphosphate kinase C-terminal domain 1 RG42_RS16885 PF13090 Polyphosphate kinase C-terminal domain 2 RG42_RS16890 PF02541 Ppx/GppA phosphatase family RG42_RS16895 PF05231 MASE1 RG42_RS16895 PF00563 EAL domain RG42_RS16905 PF11119 Protein of unknown function (DUF2633) RG42_RS16915 PF05433 Glycine zipper 2TM domain RG42_RS16920 PF17358 Family of unknown function (DUF5384) RG42_RS16925 PF00117 Glutamine amidotransferase class-I RG42_RS16925 PF02540 NAD synthase RG42_RS16925 PF00958 GMP synthase C terminal domain RG42_RS16930 PF00571 CBS domain RG42_RS16930 PF00478 IMP dehydrogenase / GMP reductase domain RG42_RS16935 PF13742 OB-fold nucleic acid binding domain RG42_RS16935 PF02601 Exonuclease VII, large subunit RG42_RS16940 PF07191 zinc-ribbons RG42_RS16945 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal RG42_RS16945 PF01926 50S ribosome-binding GTPase RG42_RS16950 PF13360 PQQ-like domain RG42_RS16955 PF09976 Tetratricopeptide repeat-like domain RG42_RS16960 PF03129 Anticodon binding domain RG42_RS16960 PF13393 Histidyl-tRNA synthetase RG42_RS16965 PF04551 GcpE protein RG42_RS16970 PF13464 Domain of unknown function (DUF4115) RG42_RS16975 PF04055 Radical SAM superfamily RG42_RS16980 PF00334 Nucleoside diphosphate kinase RG42_RS16985 PF06832 Penicillin-Binding Protein C-terminus Family RG42_RS16985 PF00905 Penicillin binding protein transpeptidase domain RG42_RS16985 PF00912 Transglycosylase RG42_RS16990 PF07678 A-macroglobulin TED domain RG42_RS16990 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain RG42_RS16990 PF11974 Bacterial alpha-2-macroglobulin MG3 domain RG42_RS16990 PF00207 Alpha-2-macroglobulin family RG42_RS16990 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain RG42_RS16990 PF07703 Alpha-2-macroglobulin bait region domain RG42_RS16990 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain RG42_RS16990 PF01835 MG2 domain RG42_RS16990 PF17962 Bacterial macroglobulin domain 6 RG42_RS16995 PF00581 Rhodanese-like domain RG42_RS17000 PF07179 SseB protein N-terminal domain RG42_RS17000 PF14581 SseB protein C-terminal domain RG42_RS17005 PF00883 Cytosol aminopeptidase family, catalytic domain RG42_RS17005 PF12404 Peptidase RG42_RS17010 PF04384 Iron-sulphur cluster assembly RG42_RS17015 PF00111 2Fe-2S iron-sulfur cluster binding domain RG42_RS17020 PF00012 Hsp70 protein RG42_RS17025 PF07743 HSCB C-terminal oligomerisation domain RG42_RS17030 PF01521 Iron-sulphur cluster biosynthesis RG42_RS17035 PF01592 NifU-like N terminal domain RG42_RS17040 PF00266 Aminotransferase class-V RG42_RS17045 PF02082 Transcriptional regulator RG42_RS17050 PF00588 SpoU rRNA Methylase family RG42_RS17055 PF00459 Inositol monophosphatase family RG42_RS17060 PF12146 Serine aminopeptidase, S33 RG42_RS17065 PF00874 PRD domain RG42_RS17070 PF12832 MFS_1 like family RG42_RS17075 PF03466 LysR substrate binding domain RG42_RS17075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG42_RS17080 PF00848 Ring hydroxylating alpha subunit (catalytic domain) RG42_RS17080 PF00355 Rieske [2Fe-2S] domain RG42_RS17085 PF00866 Ring hydroxylating beta subunit RG42_RS17090 PF00355 Rieske [2Fe-2S] domain RG42_RS17095 PF00106 short chain dehydrogenase RG42_RS17100 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG42_RS17100 PF14759 Reductase C-terminal RG42_RS17105 PF07681 DoxX RG42_RS17110 PF01263 Aldose 1-epimerase RG42_RS17115 PF00107 Zinc-binding dehydrogenase RG42_RS17115 PF08240 Alcohol dehydrogenase GroES-like domain RG42_RS17120 PF02653 Branched-chain amino acid transport system / permease component RG42_RS17125 PF00005 ABC transporter RG42_RS17130 PF13407 Periplasmic binding protein domain RG42_RS17135 PF17128 Domain of unknown function (DUF5107) RG42_RS17135 PF13181 Tetratricopeptide repeat RG42_RS17140 PF00480 ROK family RG42_RS17145 PF00464 Serine hydroxymethyltransferase RG42_RS17155 PF00970 Oxidoreductase FAD-binding domain RG42_RS17155 PF00042 Globin RG42_RS17155 PF00175 Oxidoreductase NAD-binding domain RG42_RS17160 PF00543 Nitrogen regulatory protein P-II RG42_RS17165 PF00158 Sigma-54 interaction domain RG42_RS17165 PF00072 Response regulator receiver domain RG42_RS17170 PF13942 YfhG lipoprotein RG42_RS17175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG42_RS17175 PF00512 His Kinase A (phospho-acceptor) domain RG42_RS17180 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal RG42_RS17180 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain RG42_RS17180 PF02769 AIR synthase related protein, C-terminal domain RG42_RS17190 PF00497 Bacterial extracellular solute-binding proteins, family 3 RG42_RS17190 PF01464 Transglycosylase SLT domain RG42_RS17195 PF14437 MafB19-like deaminase RG42_RS17205 PF01418 Helix-turn-helix domain, rpiR family RG42_RS17205 PF01380 SIS domain RG42_RS17210 PF12838 4Fe-4S dicluster domain RG42_RS17230 PF01648 4'-phosphopantetheinyl transferase superfamily RG42_RS17235 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ RG42_RS17240 PF02565 Recombination protein O C terminal RG42_RS17240 PF11967 Recombination protein O N terminal RG42_RS17245 PF07650 KH domain RG42_RS17245 PF01926 50S ribosome-binding GTPase RG42_RS17250 PF14622 Ribonuclease-III-like RG42_RS17250 PF00035 Double-stranded RNA binding motif RG42_RS17260 PF10502 Signal peptidase, peptidase S26 RG42_RS17265 PF06421 GTP-binding protein LepA C-terminus RG42_RS17265 PF03144 Elongation factor Tu domain 2 RG42_RS17265 PF00679 Elongation factor G C-terminus RG42_RS17265 PF00009 Elongation factor Tu GTP binding domain RG42_RS17275 PF17188 MucB/RseB C-terminal domain RG42_RS17275 PF03888 MucB/RseB N-terminal domain RG42_RS17280 PF03873 Anti sigma-E protein RseA, C-terminal domain RG42_RS17280 PF03872 Anti sigma-E protein RseA, N-terminal domain RG42_RS17285 PF08281 Sigma-70, region 4 RG42_RS17285 PF04542 Sigma-70 region 2 RG42_RS17295 PF02910 Fumarate reductase flavoprotein C-term RG42_RS17295 PF00890 FAD binding domain RG42_RS17300 PF05175 Methyltransferase small domain RG42_RS17305 PF00270 DEAD/DEAH box helicase RG42_RS17305 PF00271 Helicase conserved C-terminal domain RG42_RS17310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG42_RS17310 PF03466 LysR substrate binding domain RG42_RS17315 PF01810 LysE type translocator RG42_RS17320 PF01228 Glycine radical RG42_RS17325 PF03167 Uracil DNA glycosylase superfamily RG42_RS17330 PF08032 RNA 2'-O ribose methyltransferase substrate binding RG42_RS17330 PF00588 SpoU rRNA Methylase family RG42_RS17335 PF00085 Thioredoxin RG42_RS17340 PF03942 DTW domain RG42_RS17345 PF00583 Acetyltransferase (GNAT) family RG42_RS17345 PF13380 CoA binding domain RG42_RS17345 PF13607 Succinyl-CoA ligase like flavodoxin domain RG42_RS17350 PF13091 PLD-like domain RG42_RS17355 PF10043 Predicted periplasmic lipoprotein (DUF2279) RG42_RS17360 PF00083 Sugar (and other) transporter RG42_RS17395 PF02861 Clp amino terminal domain, pathogenicity island component RG42_RS17395 PF17871 AAA lid domain RG42_RS17395 PF07724 AAA domain (Cdc48 subfamily) RG42_RS17395 PF00004 ATPase family associated with various cellular activities (AAA) RG42_RS17395 PF10431 C-terminal, D2-small domain, of ClpB protein RG42_RS17400 PF02578 Multi-copper polyphenol oxidoreductase laccase RG42_RS17405 PF01479 S4 domain RG42_RS17405 PF00849 RNA pseudouridylate synthase RG42_RS17410 PF13525 Outer membrane lipoprotein RG42_RS17420 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein RG42_RS17425 PF01817 Chorismate mutase type II RG42_RS17425 PF00800 Prephenate dehydratase RG42_RS17430 PF02153 Prephenate dehydrogenase RG42_RS17430 PF01817 Chorismate mutase type II RG42_RS17435 PF00793 DAHP synthetase I family RG42_RS17440 PF10973 Protein of unknown function (DUF2799) RG42_RS17445 PF13689 YfiR/HmsC-like RG42_RS17450 PF00990 Diguanylate cyclase, GGDEF domain RG42_RS17450 PF17152 Periplasmic sensor domain RG42_RS17455 PF00691 OmpA family RG42_RS17460 PF01245 Ribosomal protein L19 RG42_RS17465 PF01746 tRNA (Guanine-1)-methyltransferase RG42_RS17470 PF01782 RimM N-terminal domain RG42_RS17470 PF05239 PRC-barrel domain RG42_RS17475 PF00886 Ribosomal protein S16 RG42_RS17480 PF02978 Signal peptide binding domain RG42_RS17480 PF00448 SRP54-type protein, GTPase domain RG42_RS17480 PF02881 SRP54-type protein, helical bundle domain RG42_RS17485 PF01578 Cytochrome C assembly protein RG42_RS17490 PF03471 Transporter associated domain RG42_RS17490 PF00571 CBS domain RG42_RS17490 PF01595 Cyclin M transmembrane N-terminal domain RG42_RS17495 PF01025 GrpE RG42_RS17505 PF01513 ATP-NAD kinase RG42_RS17510 PF02463 RecF/RecN/SMC N terminal domain RG42_RS17515 PF04355 SmpA / OmlA family RG42_RS17520 PF03658 RnfH family Ubiquitin RG42_RS17525 PF03364 Polyketide cyclase / dehydrase and lipid transport RG42_RS17530 PF01668 SmpB protein RG42_RS17540 PF16168 Adhesin of bacterial autotransporter system, probable stalk RG42_RS17540 PF03797 Autotransporter beta-domain RG42_RS17540 PF03212 Pertactin RG42_RS17560 PF17621 Family of unknown function (DUF5508) RG42_RS17565 PF17612 Family of unknown function (DUF5507) RG42_RS17575 PF00128 Alpha amylase, catalytic domain RG42_RS17585 PF00128 Alpha amylase, catalytic domain RG42_RS17590 PF00128 Alpha amylase, catalytic domain RG42_RS17595 PF08943 CsiD RG42_RS17600 PF01266 FAD dependent oxidoreductase RG42_RS17605 PF00171 Aldehyde dehydrogenase family RG42_RS17610 PF00202 Aminotransferase class-III RG42_RS17615 PF00324 Amino acid permease RG42_RS17620 PF00392 Bacterial regulatory proteins, gntR family RG42_RS17620 PF07729 FCD domain RG42_RS17625 PF01476 LysM domain RG42_RS17625 PF04972 BON domain RG42_RS17630 PF01679 Proteolipid membrane potential modulator RG42_RS17635 PF01022 Bacterial regulatory protein, arsR family RG42_RS17640 PF11127 Protein of unknown function (DUF2892) RG42_RS17640 PF00581 Rhodanese-like domain RG42_RS17645 PF00816 H-NS histone family RG42_RS17650 PF06610 L-alanine exporter RG42_RS17655 PF09400 Protein of unknown function (DUF2002) RG42_RS17660 PF05957 Bacterial protein of unknown function (DUF883) RG42_RS17665 PF00462 Glutaredoxin RG42_RS17670 PF07972 NrdI Flavodoxin like RG42_RS17675 PF08343 Ribonucleotide reductase N-terminal RG42_RS17675 PF00317 Ribonucleotide reductase, all-alpha domain RG42_RS17675 PF02867 Ribonucleotide reductase, barrel domain RG42_RS17680 PF00268 Ribonucleotide reductase, small chain RG42_RS17690 PF00571 CBS domain RG42_RS17690 PF00005 ABC transporter RG42_RS17695 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS17700 PF04069 Substrate binding domain of ABC-type glycine betaine transport system RG42_RS17705 PF07690 Major Facilitator Superfamily RG42_RS17710 PF03591 AzlC protein RG42_RS17715 PF05437 Branched-chain amino acid transport protein (AzlD) RG42_RS17720 PF01047 MarR family RG42_RS17725 PF00529 HlyD membrane-fusion protein of T1SS RG42_RS17725 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RG42_RS17730 PF07690 Major Facilitator Superfamily RG42_RS17735 PF02664 S-Ribosylhomocysteinase (LuxS) RG42_RS17740 PF04262 Glutamate-cysteine ligase RG42_RS17745 PF09335 SNARE associated Golgi protein RG42_RS17750 PF13419 Haloacid dehalogenase-like hydrolase RG42_RS17780 PF02599 Global regulator protein family RG42_RS17785 PF01411 tRNA synthetases class II (A) RG42_RS17785 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RG42_RS17785 PF02272 DHHA1 domain RG42_RS17795 PF02631 RecX family RG42_RS17800 PF00154 recA bacterial DNA recombination protein RG42_RS17805 PF02464 Competence-damaged protein RG42_RS17810 PF13406 Transglycosylase SLT domain RG42_RS17815 PF03608 PTS system enzyme II sorbitol-specific factor RG42_RS17820 PF07663 Sorbitol phosphotransferase enzyme II C-terminus RG42_RS17820 PF03612 Sorbitol phosphotransferase enzyme II N-terminus RG42_RS17825 PF03829 PTS system glucitol/sorbitol-specific IIA component RG42_RS17830 PF00106 short chain dehydrogenase RG42_RS17835 PF06923 Glucitol operon activator protein (GutM) RG42_RS17840 PF00455 DeoR C terminal sensor domain RG42_RS17840 PF08220 DeoR-like helix-turn-helix domain RG42_RS17845 PF00571 CBS domain RG42_RS17845 PF01380 SIS domain RG42_RS17850 PF00158 Sigma-54 interaction domain RG42_RS17850 PF01590 GAF domain RG42_RS17855 PF00301 Rubredoxin RG42_RS17855 PF00753 Metallo-beta-lactamase superfamily RG42_RS17855 PF00258 Flavodoxin RG42_RS17860 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG42_RS17860 PF18113 Rubredoxin binding C-terminal domain RG42_RS17870 PF01300 Telomere recombination RG42_RS17870 PF07503 HypF finger RG42_RS17870 PF17788 HypF Kae1-like domain RG42_RS17870 PF00708 Acylphosphatase RG42_RS17875 PF12800 4Fe-4S binding domain RG42_RS17875 PF13247 4Fe-4S dicluster domain RG42_RS17880 PF00356 Bacterial regulatory proteins, lacI family RG42_RS17885 PF00367 phosphotransferase system, EIIB RG42_RS17885 PF02378 Phosphotransferase system, EIIC RG42_RS17890 PF00232 Glycosyl hydrolase family 1 RG42_RS17895 PF01750 Hydrogenase maturation protease RG42_RS17900 PF07450 Formate hydrogenlyase maturation protein HycH RG42_RS17905 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RG42_RS17910 PF12838 4Fe-4S dicluster domain RG42_RS17915 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit RG42_RS17915 PF00374 Nickel-dependent hydrogenase RG42_RS17915 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit RG42_RS17920 PF00146 NADH dehydrogenase RG42_RS17925 PF00361 Proton-conducting membrane transporter RG42_RS17930 PF13247 4Fe-4S dicluster domain RG42_RS17940 PF11046 Transcriptional repressor of hyc and hyp operons RG42_RS17945 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA RG42_RS17950 PF02492 CobW/HypB/UreG, nucleotide-binding domain RG42_RS17955 PF01455 HupF/HypC family RG42_RS17960 PF01924 Hydrogenase formation hypA family RG42_RS17965 PF02769 AIR synthase related protein, C-terminal domain RG42_RS17965 PF00586 AIR synthase related protein, N-terminal domain RG42_RS17970 PF01590 GAF domain RG42_RS17970 PF00158 Sigma-54 interaction domain RG42_RS17975 PF11756 Nitrous oxide-stimulated promoter RG42_RS17980 PF05192 MutS domain III RG42_RS17980 PF05188 MutS domain II RG42_RS17980 PF01624 MutS domain I RG42_RS17980 PF00488 MutS domain V RG42_RS17980 PF05190 MutS family domain IV RG42_RS17985 PF00149 Calcineurin-like phosphoesterase RG42_RS17990 PF08220 DeoR-like helix-turn-helix domain RG42_RS17990 PF00455 DeoR C terminal sensor domain RG42_RS17995 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RG42_RS17995 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RG42_RS18000 PF17042 Nucleotide-binding C-terminal domain RG42_RS18000 PF07005 Sugar-binding N-terminal domain RG42_RS18005 PF00596 Class II Aldolase and Adducin N-terminal domain RG42_RS18010 PF01261 Xylose isomerase-like TIM barrel RG42_RS18015 PF02447 GntP family permease RG42_RS18020 PF04545 Sigma-70, region 4 RG42_RS18020 PF04539 Sigma-70 region 3 RG42_RS18020 PF04542 Sigma-70 region 2 RG42_RS18020 PF00140 Sigma-70 factor, region 1.2 RG42_RS18025 PF01551 Peptidase family M23 RG42_RS18025 PF01476 LysM domain RG42_RS18035 PF01975 Survival protein SurE RG42_RS18040 PF01142 tRNA pseudouridine synthase D (TruD) RG42_RS18045 PF02542 YgbB family RG42_RS18050 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RG42_RS18055 PF04977 Septum formation initiator RG42_RS18060 PF12084 Protein of unknown function (DUF3561) RG42_RS18070 PF00009 Elongation factor Tu GTP binding domain RG42_RS18075 PF01507 Phosphoadenosine phosphosulfate reductase family RG42_RS18080 PF04389 Peptidase family M28 RG42_RS18085 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) RG42_RS18090 PF01867 CRISPR associated protein Cas1 RG42_RS18095 PF08798 CRISPR associated protein RG42_RS18100 PF09704 CRISPR-associated protein (Cas_Cas5) RG42_RS18105 PF09344 CT1975-like protein RG42_RS18110 PF00665 Integrase core domain RG42_RS18120 PF01527 Transposase RG42_RS18130 PF18019 HD domain RG42_RS18130 PF00270 DEAD/DEAH box helicase RG42_RS18130 PF00271 Helicase conserved C-terminal domain RG42_RS18135 PF01507 Phosphoadenosine phosphosulfate reductase family RG42_RS18140 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RG42_RS18140 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RG42_RS18145 PF00258 Flavodoxin RG42_RS18145 PF00175 Oxidoreductase NAD-binding domain RG42_RS18145 PF00667 FAD binding domain RG42_RS18150 PF01242 6-pyruvoyl tetrahydropterin synthase RG42_RS18165 PF04309 Glycerol-3-phosphate responsive antiterminator RG42_RS18170 PF01012 Electron transfer flavoprotein domain RG42_RS18170 PF00766 Electron transfer flavoprotein FAD-binding domain RG42_RS18180 PF00083 Sugar (and other) transporter RG42_RS18185 PF02913 FAD linked oxidases, C-terminal domain RG42_RS18185 PF01565 FAD binding domain RG42_RS18195 PF07690 Major Facilitator Superfamily RG42_RS18200 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RG42_RS18200 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RG42_RS18205 PF04055 Radical SAM superfamily RG42_RS18215 PF04536 TPM domain RG42_RS18220 PF00113 Enolase, C-terminal TIM barrel domain RG42_RS18220 PF03952 Enolase, N-terminal domain RG42_RS18225 PF06418 CTP synthase N-terminus RG42_RS18225 PF00117 Glutamine amidotransferase class-I RG42_RS18230 PF03819 MazG nucleotide pyrophosphohydrolase domain RG42_RS18235 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system RG42_RS18240 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin RG42_RS18245 PF04607 Region found in RelA / SpoT proteins RG42_RS18245 PF13291 ACT domain RG42_RS18245 PF02824 TGS domain RG42_RS18250 PF01938 TRAM domain RG42_RS18250 PF05958 tRNA (Uracil-5-)-methyltransferase RG42_RS18255 PF01627 Hpt domain RG42_RS18255 PF00672 HAMP domain RG42_RS18255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG42_RS18255 PF00072 Response regulator receiver domain RG42_RS18255 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) RG42_RS18255 PF00512 His Kinase A (phospho-acceptor) domain RG42_RS18260 PF13378 Enolase C-terminal domain-like RG42_RS18265 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RG42_RS18265 PF13378 Enolase C-terminal domain-like RG42_RS18270 PF07690 Major Facilitator Superfamily RG42_RS18275 PF00258 Flavodoxin RG42_RS18280 PF00849 RNA pseudouridylate synthase RG42_RS18285 PF04287 tRNA pseudouridine synthase C RG42_RS18295 PF07348 Syd protein (SUKH-2) RG42_RS18300 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term RG42_RS18300 PF14489 QueF-like protein RG42_RS18305 PF11892 Domain of unknown function (DUF3412) RG42_RS18305 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases RG42_RS18305 PF03641 Possible lysine decarboxylase RG42_RS18315 PF03315 Serine dehydratase beta chain RG42_RS18315 PF03313 Serine dehydratase alpha chain RG42_RS18320 PF01367 5'-3' exonuclease, C-terminal SAM fold RG42_RS18320 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RG42_RS18325 PF00465 Iron-containing alcohol dehydrogenase RG42_RS18330 PF00596 Class II Aldolase and Adducin N-terminal domain RG42_RS18335 PF07690 Major Facilitator Superfamily RG42_RS18340 PF07881 L-fucose isomerase, first N-terminal domain RG42_RS18340 PF02952 L-fucose isomerase, C-terminal domain RG42_RS18340 PF07882 L-fucose isomerase, second N-terminal domain RG42_RS18345 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RG42_RS18345 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RG42_RS18350 PF05025 RbsD / FucU transport protein family RG42_RS18355 PF08220 DeoR-like helix-turn-helix domain RG42_RS18355 PF00455 DeoR C terminal sensor domain RG42_RS18360 PF01728 FtsJ-like methyltransferase RG42_RS18360 PF18125 RlmM ferredoxin-like domain RG42_RS18365 PF04241 Protein of unknown function (DUF423) RG42_RS18370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG42_RS18370 PF03466 LysR substrate binding domain RG42_RS18375 PF06004 Bacterial protein of unknown function (DUF903) RG42_RS18380 PF00266 Aminotransferase class-V RG42_RS18385 PF02657 Fe-S metabolism associated domain RG42_RS18390 PF00899 ThiF family RG42_RS18395 PF03562 MltA specific insert domain RG42_RS18395 PF06725 3D domain RG42_RS18420 PF01520 N-acetylmuramoyl-L-alanine amidase RG42_RS18420 PF11741 AMIN domain RG42_RS18425 PF00696 Amino acid kinase family RG42_RS18425 PF00583 Acetyltransferase (GNAT) family RG42_RS18430 PF13538 UvrD-like helicase C-terminal domain RG42_RS18435 PF13361 UvrD-like helicase C-terminal domain RG42_RS18435 PF12705 PD-(D/E)XK nuclease superfamily RG42_RS18435 PF00580 UvrD/REP helicase N-terminal domain RG42_RS18440 PF16187 Middle or third domain of peptidase_M16 RG42_RS18440 PF05193 Peptidase M16 inactive domain RG42_RS18440 PF00675 Insulinase (Peptidase family M16) RG42_RS18445 PF17946 RecC C-terminal domain RG42_RS18450 PF07963 Prokaryotic N-terminal methylation motif RG42_RS18450 PF12528 Type II secretion prepilin peptidase dependent protein C RG42_RS18455 PF10713 Protein of unknown function (DUF2509) RG42_RS18460 PF07963 Prokaryotic N-terminal methylation motif RG42_RS18465 PF07963 Prokaryotic N-terminal methylation motif RG42_RS18470 PF00303 Thymidylate synthase RG42_RS18475 PF01790 Prolipoprotein diacylglyceryl transferase RG42_RS18480 PF02896 PEP-utilising enzyme, TIM barrel domain RG42_RS18480 PF00391 PEP-utilising enzyme, mobile domain RG42_RS18480 PF01590 GAF domain RG42_RS18480 PF05524 PEP-utilising enzyme, N-terminal RG42_RS18485 PF00293 NUDIX domain RG42_RS18500 PF02976 DNA mismatch repair enzyme MutH RG42_RS18505 PF03741 Integral membrane protein TerC family RG42_RS18510 PF06004 Bacterial protein of unknown function (DUF903) RG42_RS18515 PF00248 Aldo/keto reductase family RG42_RS18520 PF07690 Major Facilitator Superfamily RG42_RS18525 PF00501 AMP-binding enzyme RG42_RS18525 PF01553 Acyltransferase RG42_RS18535 PF00356 Bacterial regulatory proteins, lacI family RG42_RS18540 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RG42_RS18540 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RG42_RS18545 PF03466 LysR substrate binding domain RG42_RS18545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG42_RS18550 PF01177 Asp/Glu/Hydantoin racemase RG42_RS18555 PF00083 Sugar (and other) transporter RG42_RS18565 PF04962 KduI/IolB family RG42_RS18570 PF02803 Thiolase, C-terminal domain RG42_RS18570 PF00108 Thiolase, N-terminal domain RG42_RS18575 PF03222 Tryptophan/tyrosine permease family RG42_RS18580 PF00196 Bacterial regulatory proteins, luxR family RG42_RS18585 PF00486 Transcriptional regulatory protein, C terminal RG42_RS18610 PF07720 Tetratricopeptide repeat RG42_RS18620 PF00486 Transcriptional regulatory protein, C terminal RG42_RS18635 PF00072 Response regulator receiver domain RG42_RS18635 PF00196 Bacterial regulatory proteins, luxR family RG42_RS18640 PF00196 Bacterial regulatory proteins, luxR family RG42_RS18640 PF00072 Response regulator receiver domain RG42_RS18655 PF09482 Bacterial type III secretion apparatus protein (OrgA_MxiK) RG42_RS18660 PF01514 Secretory protein of YscJ/FliF family RG42_RS18670 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF RG42_RS18675 PF09480 Type III secretion system protein PrgH-EprH (PrgH) RG42_RS18680 PF09480 Type III secretion system protein PrgH-EprH (PrgH) RG42_RS18695 PF01312 FlhB HrpN YscU SpaS Family RG42_RS18700 PF01312 FlhB HrpN YscU SpaS Family RG42_RS18705 PF01311 Bacterial export proteins, family 1 RG42_RS18710 PF01313 Bacterial export proteins, family 3 RG42_RS18715 PF00813 FliP family RG42_RS18730 PF01609 Transposase DDE domain RG42_RS18740 PF01527 Transposase RG42_RS18750 PF00665 Integrase core domain RG42_RS18765 PF01551 Peptidase family M23 RG42_RS18765 PF01476 LysM domain RG42_RS18775 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RG42_RS18775 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RG42_RS18780 PF00941 FAD binding domain in molybdopterin dehydrogenase RG42_RS18780 PF03450 CO dehydrogenase flavoprotein C-terminal domain RG42_RS18785 PF01799 [2Fe-2S] binding domain RG42_RS18785 PF00111 2Fe-2S iron-sulfur cluster binding domain RG42_RS18790 PF13188 PAS domain RG42_RS18790 PF00158 Sigma-54 interaction domain RG42_RS18790 PF02954 Bacterial regulatory protein, Fis family RG42_RS18795 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RG42_RS18795 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RG42_RS18800 PF00291 Pyridoxal-phosphate dependent enzyme RG42_RS18805 PF07687 Peptidase dimerisation domain RG42_RS18805 PF01546 Peptidase family M20/M25/M40 RG42_RS18810 PF01979 Amidohydrolase family RG42_RS18815 PF00696 Amino acid kinase family RG42_RS18825 PF02625 XdhC and CoxI family RG42_RS18825 PF13478 XdhC Rossmann domain RG42_RS18835 PF12804 MobA-like NTP transferase domain RG42_RS18840 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RG42_RS18840 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG42_RS18845 PF01979 Amidohydrolase family RG42_RS18850 PF00941 FAD binding domain in molybdopterin dehydrogenase RG42_RS18855 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RG42_RS18855 PF01799 [2Fe-2S] binding domain RG42_RS18855 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RG42_RS18860 PF00860 Permease family RG42_RS18865 PF01979 Amidohydrolase family RG42_RS18870 PF00860 Permease family RG42_RS18875 PF13247 4Fe-4S dicluster domain RG42_RS18880 PF13247 4Fe-4S dicluster domain RG42_RS18880 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RG42_RS18880 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG42_RS18890 PF00860 Permease family RG42_RS18900 PF00293 NUDIX domain RG42_RS18905 PF01336 OB-fold nucleic acid binding domain RG42_RS18905 PF00152 tRNA synthetases class II (D, K and N) RG42_RS18915 PF01368 DHH family RG42_RS18915 PF02272 DHHA1 domain RG42_RS18915 PF17768 RecJ OB domain RG42_RS18920 PF10411 Disulfide bond isomerase protein N-terminus RG42_RS18920 PF13098 Thioredoxin-like domain RG42_RS18925 PF02899 Phage integrase, N-terminal SAM-like domain RG42_RS18925 PF00589 Phage integrase family RG42_RS18930 PF00258 Flavodoxin RG42_RS18935 PF07254 Membrane-bound toxin component of toxin-antitoxin system RG42_RS18940 PF03937 Flavinator of succinate dehydrogenase RG42_RS18945 PF01571 Aminomethyltransferase folate-binding domain RG42_RS18950 PF03006 Haemolysin-III related RG42_RS18955 PF04266 ASCH domain RG42_RS18960 PF00232 Glycosyl hydrolase family 1 RG42_RS18970 PF02347 Glycine cleavage system P-protein RG42_RS18975 PF01597 Glycine cleavage H-protein RG42_RS18980 PF08669 Glycine cleavage T-protein C-terminal barrel domain RG42_RS18980 PF01571 Aminomethyltransferase folate-binding domain RG42_RS18985 PF01494 FAD binding domain RG42_RS18990 PF01494 FAD binding domain RG42_RS18995 PF05195 Aminopeptidase P, N-terminal domain RG42_RS18995 PF00557 Metallopeptidase family M24 RG42_RS19000 PF03695 Uncharacterised protein family (UPF0149) RG42_RS19010 PF05164 Cell division protein ZapA RG42_RS19020 PF01812 5-formyltetrahydrofolate cyclo-ligase family RG42_RS19030 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RG42_RS19030 PF01842 ACT domain RG42_RS19030 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RG42_RS19035 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) RG42_RS19040 PF03466 LysR substrate binding domain RG42_RS19045 PF03466 LysR substrate binding domain RG42_RS19045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG42_RS19055 PF02310 B12 binding domain RG42_RS19055 PF01642 Methylmalonyl-CoA mutase RG42_RS19065 PF00378 Enoyl-CoA hydratase/isomerase RG42_RS19070 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain RG42_RS19070 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain RG42_RS19080 PF04402 Protein of unknown function (DUF541) RG42_RS19085 PF01810 LysE type translocator RG42_RS19090 PF00924 Mechanosensitive ion channel RG42_RS19090 PF05552 Conserved TM helix RG42_RS19095 PF01116 Fructose-bisphosphate aldolase class-II RG42_RS19100 PF00162 Phosphoglycerate kinase RG42_RS19105 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RG42_RS19105 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RG42_RS19120 PF05068 Mannitol repressor RG42_RS19130 PF08240 Alcohol dehydrogenase GroES-like domain RG42_RS19130 PF00107 Zinc-binding dehydrogenase RG42_RS19135 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RG42_RS19135 PF02378 Phosphotransferase system, EIIC RG42_RS19140 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RG42_RS19145 PF02779 Transketolase, pyrimidine binding domain RG42_RS19145 PF02780 Transketolase, C-terminal domain RG42_RS19145 PF00456 Transketolase, thiamine diphosphate binding domain RG42_RS19150 PF01435 Peptidase family M48 RG42_RS19155 PF00491 Arginase family RG42_RS19160 PF17810 Arginine decarboxylase helical bundle domain RG42_RS19160 PF17944 Arginine decarboxylase C-terminal helical extension RG42_RS19160 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RG42_RS19165 PF11036 Virulence promoting factor RG42_RS19170 PF17430 Uncharacterized YqgC-like RG42_RS19180 PF02773 S-adenosylmethionine synthetase, C-terminal domain RG42_RS19180 PF02772 S-adenosylmethionine synthetase, central domain RG42_RS19180 PF00438 S-adenosylmethionine synthetase, N-terminal domain RG42_RS19190 PF00083 Sugar (and other) transporter RG42_RS19195 PF10263 SprT-like family RG42_RS19195 PF17283 SprT-like zinc ribbon domain RG42_RS19200 PF04231 Endonuclease I RG42_RS19205 PF04452 RNA methyltransferase RG42_RS19210 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain RG42_RS19210 PF02951 Prokaryotic glutathione synthetase, N-terminal domain RG42_RS19215 PF02622 Uncharacterized ACR, COG1678 RG42_RS19220 PF03652 Holliday junction resolvase RG42_RS19225 PF00437 Type II/IV secretion system protein RG42_RS19230 PF01168 Alanine racemase, N-terminal domain RG42_RS19235 PF02325 YGGT family RG42_RS19240 PF02594 Uncharacterised ACR, YggU family COG1872 RG42_RS19245 PF01725 Ham1 family RG42_RS19250 PF06969 HemN C-terminal domain RG42_RS19250 PF04055 Radical SAM superfamily RG42_RS19255 PF06717 Protein of unknown function (DUF1202) RG42_RS19260 PF17763 Glutaminase/Asparaginase C-terminal domain RG42_RS19260 PF00710 Asparaginase, N-terminal RG42_RS19265 PF11101 Protein of unknown function (DUF2884) RG42_RS19270 PF04320 Protein with unknown function (DUF469) RG42_RS19275 PF02390 Putative methyltransferase RG42_RS19285 PF14815 NUDIX domain RG42_RS19285 PF10576 Iron-sulfur binding domain of endonuclease III RG42_RS19285 PF00730 HhH-GPD superfamily base excision DNA repair protein RG42_RS19285 PF00633 Helix-hairpin-helix motif RG42_RS19290 PF04362 Bacterial Fe(2+) trafficking RG42_RS19295 PF01464 Transglycosylase SLT domain RG42_RS19295 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain RG42_RS19300 PF03825 Nucleoside H+ symporter RG42_RS19305 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain RG42_RS19305 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain RG42_RS19305 PF01276 Orn/Lys/Arg decarboxylase, major domain RG42_RS19315 PF04474 Protein of unknown function (DUF554) RG42_RS19325 PF04612 Type II secretion system (T2SS), protein M RG42_RS19330 PF12693 GspL periplasmic domain RG42_RS19335 PF03934 Type II secretion system (T2SS), protein K RG42_RS19340 PF11612 Type II secretion system (T2SS), protein J RG42_RS19340 PF07963 Prokaryotic N-terminal methylation motif RG42_RS19345 PF07963 Prokaryotic N-terminal methylation motif RG42_RS19345 PF02501 Type II secretion system (T2SS), protein I RG42_RS19350 PF12019 Type II transport protein GspH RG42_RS19355 PF07963 Prokaryotic N-terminal methylation motif RG42_RS19355 PF08334 Type II secretion system (T2SS), protein G RG42_RS19360 PF00482 Type II secretion system (T2SS), protein F RG42_RS19365 PF00437 Type II/IV secretion system protein RG42_RS19370 PF03958 Bacterial type II/III secretion system short domain RG42_RS19370 PF00263 Bacterial type II and III secretion system protein RG42_RS19375 PF11356 Type II secretion system protein C RG42_RS19380 PF16549 Type II secretion system (T2SS) pilotin, S protein RG42_RS19385 PF06750 Bacterial Peptidase A24 N-terminal domain RG42_RS19385 PF01478 Type IV leader peptidase family RG42_RS19395 PF13402 Peptidase M60, enhancin and enhancin-like RG42_RS19395 PF13322 Domain of unknown function (DUF4092) RG42_RS19395 PF17291 N-terminal domain of M60-like peptidases RG42_RS19410 PF02652 L-lactate permease RG42_RS19415 PF01274 Malate synthase RG42_RS19420 PF03928 Haem-degrading RG42_RS19425 PF02754 Cysteine-rich domain RG42_RS19425 PF13183 4Fe-4S dicluster domain RG42_RS19430 PF01565 FAD binding domain RG42_RS19435 PF02913 FAD linked oxidases, C-terminal domain RG42_RS19435 PF01565 FAD binding domain RG42_RS19440 PF07729 FCD domain RG42_RS19440 PF00392 Bacterial regulatory proteins, gntR family RG42_RS19450 PF00501 AMP-binding enzyme RG42_RS19450 PF14535 AMP-binding enzyme C-terminal domain RG42_RS19460 PF00550 Phosphopantetheine attachment site RG42_RS19465 PF00155 Aminotransferase class I and II RG42_RS19475 PF03739 Lipopolysaccharide export system permease LptF/LptG RG42_RS19480 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) RG42_RS19510 PF01384 Phosphate transporter family RG42_RS19515 PF03738 Glutathionylspermidine synthase preATP-grasp RG42_RS19515 PF05257 CHAP domain RG42_RS19520 PF02798 Glutathione S-transferase, N-terminal domain RG42_RS19525 PF01455 HupF/HypC family RG42_RS19530 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA RG42_RS19535 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE RG42_RS19540 PF01750 Hydrogenase maturation protease RG42_RS19545 PF00374 Nickel-dependent hydrogenase RG42_RS19550 PF03916 Polysulphide reductase, NrfD RG42_RS19555 PF13247 4Fe-4S dicluster domain RG42_RS19560 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal RG42_RS19560 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RG42_RS19570 PF11115 Protein of unknown function (DUF2623) RG42_RS19585 PF00248 Aldo/keto reductase family RG42_RS19590 PF03350 Uncharacterized protein family, UPF0114 RG42_RS19605 PF02472 Biopolymer transport protein ExbD/TolR RG42_RS19610 PF01618 MotA/TolQ/ExbB proton channel family RG42_RS19620 PF01053 Cys/Met metabolism PLP-dependent enzyme RG42_RS19625 PF09335 SNARE associated Golgi protein RG42_RS19630 PF06719 AraC-type transcriptional regulator N-terminus RG42_RS19630 PF12833 Helix-turn-helix domain RG42_RS19640 PF00465 Iron-containing alcohol dehydrogenase RG42_RS19645 PF00248 Aldo/keto reductase family RG42_RS19650 PF12883 Protein of unknown function (DUF3828) RG42_RS19655 PF04728 Lipoprotein leucine-zipper RG42_RS19660 PF08497 Radical SAM N-terminal RG42_RS19660 PF04055 Radical SAM superfamily RG42_RS19660 PF11842 Domain of unknown function (DUF3362) RG42_RS19665 PF07732 Multicopper oxidase RG42_RS19665 PF00394 Multicopper oxidase RG42_RS19665 PF07731 Multicopper oxidase RG42_RS19670 PF01553 Acyltransferase RG42_RS19680 PF03989 DNA gyrase C-terminal domain, beta-propeller RG42_RS19680 PF00521 DNA gyrase/topoisomerase IV, subunit A RG42_RS19685 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RG42_RS19690 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA RG42_RS19695 PF15723 Motility quorum-sensing regulator, toxin of MqsA RG42_RS19700 PF06445 GyrI-like small molecule binding domain RG42_RS19705 PF04076 Bacterial OB fold (BOF) protein RG42_RS19710 PF00072 Response regulator receiver domain RG42_RS19710 PF00486 Transcriptional regulatory protein, C terminal RG42_RS19715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG42_RS19715 PF08521 Two-component sensor kinase N-terminal RG42_RS19715 PF00512 His Kinase A (phospho-acceptor) domain RG42_RS19720 PF10840 Protein of unknown function (DUF2645) RG42_RS19725 PF02525 Flavodoxin-like fold RG42_RS19730 PF03992 Antibiotic biosynthesis monooxygenase RG42_RS19735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG42_RS19735 PF00986 DNA gyrase B subunit, carboxyl terminus RG42_RS19735 PF00204 DNA gyrase B RG42_RS19735 PF01751 Toprim domain RG42_RS19740 PF05728 Uncharacterised protein family (UPF0227) RG42_RS19745 PF00149 Calcineurin-like phosphoesterase RG42_RS19750 PF06853 Protein of unknown function (DUF1249) RG42_RS19755 PF00293 NUDIX domain RG42_RS19760 PF02321 Outer membrane efflux protein RG42_RS19770 PF06693 Protein of unknown function (DUF1190) RG42_RS19775 PF03738 Glutathionylspermidine synthase preATP-grasp RG42_RS19780 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase RG42_RS19785 PF02535 ZIP Zinc transporter RG42_RS19795 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase RG42_RS19800 PF04380 Membrane fusogenic activity RG42_RS19805 PF00419 Fimbrial protein RG42_RS19810 PF13953 PapC C-terminal domain RG42_RS19810 PF00577 Outer membrane usher protein RG42_RS19810 PF13954 PapC N-terminal domain RG42_RS19815 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RG42_RS19815 PF02753 Pili assembly chaperone PapD, C-terminal domain RG42_RS19825 PF08971 Glycogen synthesis protein RG42_RS19830 PF07290 Protein of unknown function (DUF1449) RG42_RS19835 PF15975 Flotillin RG42_RS19835 PF01145 SPFH domain / Band 7 family RG42_RS19850 PF01467 Cytidylyltransferase-like RG42_RS19850 PF00294 pfkB family carbohydrate kinase RG42_RS19855 PF08335 GlnD PII-uridylyltransferase RG42_RS19855 PF03710 Glutamate-ammonia ligase adenylyltransferase RG42_RS19860 PF01928 CYTH domain RG42_RS19870 PF08239 Bacterial SH3 domain RG42_RS19875 PF01743 Poly A polymerase head domain RG42_RS19875 PF12627 Probable RNA and SrmB- binding site of polymerase A RG42_RS19875 PF01966 HD domain RG42_RS19880 PF02673 Bacitracin resistance protein BacA RG42_RS19885 PF02152 Dihydroneopterin aldolase RG42_RS19890 PF02660 Glycerol-3-phosphate acyltransferase RG42_RS19895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG42_RS19895 PF03466 LysR substrate binding domain RG42_RS19905 PF05681 Fumarate hydratase (Fumerase) RG42_RS19910 PF05683 Fumarase C-terminus RG42_RS19915 PF00939 Sodium:sulfate symporter transmembrane region RG42_RS19920 PF00814 Glycoprotease family RG42_RS19930 PF01165 Ribosomal protein S21 RG42_RS19935 PF10410 DnaB-helicase binding domain of primase RG42_RS19935 PF08278 DNA primase DnaG DnaB-binding RG42_RS19935 PF08275 DNA primase catalytic core, N-terminal domain RG42_RS19935 PF01807 CHC2 zinc finger RG42_RS19945 PF04545 Sigma-70, region 4 RG42_RS19945 PF04546 Sigma-70, non-essential region RG42_RS19945 PF04539 Sigma-70 region 3 RG42_RS19945 PF03979 Sigma-70 factor, region 1.1 RG42_RS19945 PF00140 Sigma-70 factor, region 1.2 RG42_RS19945 PF04542 Sigma-70 region 2 RG42_RS19950 PF03167 Uracil DNA glycosylase superfamily RG42_RS19960 PF08021 Siderophore-interacting FAD-binding domain RG42_RS19960 PF04954 Siderophore-interacting protein RG42_RS19970 PF03551 Transcriptional regulator PadR-like family RG42_RS19975 PF08447 PAS fold RG42_RS19975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RG42_RS19985 PF00202 Aminotransferase class-III RG42_RS19990 PF01588 Putative tRNA binding domain RG42_RS20000 PF00356 Bacterial regulatory proteins, lacI family RG42_RS20005 PF02836 Glycosyl hydrolases family 2, TIM barrel domain RG42_RS20005 PF02929 Beta galactosidase small chain RG42_RS20005 PF02837 Glycosyl hydrolases family 2, sugar binding domain RG42_RS20005 PF00703 Glycosyl hydrolases family 2 RG42_RS20005 PF16353 Domain of unknown function(DUF4981) RG42_RS20010 PF04074 YhcH/YjgK/YiaL RG42_RS20015 PF13520 Amino acid permease RG42_RS20025 PF01204 Trehalase RG42_RS20030 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG42_RS20030 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RG42_RS20035 PF01381 Helix-turn-helix RG42_RS20040 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system RG42_RS20050 PF05175 Methyltransferase small domain RG42_RS20055 PF01863 Protein of unknown function DUF45 RG42_RS20060 PF02698 DUF218 domain RG42_RS20065 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RG42_RS20070 PF03741 Integral membrane protein TerC family RG42_RS20075 PF00375 Sodium:dicarboxylate symporter family RG42_RS20080 PF10688 Bacterial inner membrane protein RG42_RS20085 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus RG42_RS20085 PF08666 SAF domain RG42_RS20090 PF02614 Glucuronate isomerase RG42_RS20095 PF07690 Major Facilitator Superfamily RG42_RS20100 PF00392 Bacterial regulatory proteins, gntR family RG42_RS20100 PF07729 FCD domain RG42_RS20105 PF09335 SNARE associated Golgi protein RG42_RS20110 PF13721 SecD export protein N-terminal TM region RG42_RS20115 PF06476 Protein of unknown function (DUF1090) RG42_RS20120 PF05957 Bacterial protein of unknown function (DUF883) RG42_RS20125 PF07332 Putative Actinobacterial Holin-X, holin superfamily III RG42_RS20130 PF13997 YqjK-like protein RG42_RS20135 PF07681 DoxX RG42_RS20140 PF13409 Glutathione S-transferase, N-terminal domain RG42_RS20145 PF05656 Protein of unknown function (DUF805) RG42_RS20150 PF05656 Protein of unknown function (DUF805) RG42_RS20160 PF03466 LysR substrate binding domain RG42_RS20160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG42_RS20165 PF02678 Pirin RG42_RS20165 PF17954 Quercetinase C-terminal cupin domain RG42_RS20175 PF03313 Serine dehydratase alpha chain RG42_RS20185 PF03313 Serine dehydratase alpha chain RG42_RS20185 PF03315 Serine dehydratase beta chain RG42_RS20190 PF01042 Endoribonuclease L-PSP RG42_RS20195 PF01228 Glycine radical RG42_RS20195 PF02901 Pyruvate formate lyase-like RG42_RS20200 PF00871 Acetokinase family RG42_RS20205 PF03222 Tryptophan/tyrosine permease family RG42_RS20210 PF00291 Pyridoxal-phosphate dependent enzyme RG42_RS20215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG42_RS20215 PF03466 LysR substrate binding domain RG42_RS20240 PF02595 Glycerate kinase family RG42_RS20245 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RG42_RS20245 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RG42_RS20250 PF03328 HpcH/HpaI aldolase/citrate lyase family RG42_RS20255 PF07690 Major Facilitator Superfamily RG42_RS20260 PF08666 SAF domain RG42_RS20260 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus RG42_RS20265 PF15937 prlF antitoxin for toxin YhaV_toxin RG42_RS20270 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system RG42_RS20275 PF08220 DeoR-like helix-turn-helix domain RG42_RS20275 PF00455 DeoR C terminal sensor domain RG42_RS20285 PF08013 Tagatose 6 phosphate kinase RG42_RS20290 PF03830 PTS system sorbose subfamily IIB component RG42_RS20295 PF03609 PTS system sorbose-specific iic component RG42_RS20300 PF03613 PTS system mannose/fructose/sorbose family IID component RG42_RS20305 PF03610 PTS system fructose IIA component RG42_RS20310 PF01979 Amidohydrolase family RG42_RS20315 PF01380 SIS domain RG42_RS20320 PF01116 Fructose-bisphosphate aldolase class-II RG42_RS20325 PF03830 PTS system sorbose subfamily IIB component RG42_RS20330 PF03609 PTS system sorbose-specific iic component RG42_RS20335 PF03613 PTS system mannose/fructose/sorbose family IID component RG42_RS20340 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase RG42_RS20345 PF00419 Fimbrial protein RG42_RS20350 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RG42_RS20350 PF02753 Pili assembly chaperone PapD, C-terminal domain RG42_RS20360 PF00419 Fimbrial protein RG42_RS20365 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RG42_RS20370 PF04348 LppC putative lipoprotein RG42_RS20375 PF02021 Uncharacterised protein family UPF0102 RG42_RS20380 PF13580 SIS domain RG42_RS20385 PF04972 BON domain RG42_RS20390 PF03773 Predicted permease RG42_RS20395 PF13460 NAD(P)H-binding RG42_RS20400 PF01965 DJ-1/PfpI family RG42_RS20410 PF01541 GIY-YIG catalytic domain RG42_RS20415 PF13508 Acetyltransferase (GNAT) domain RG42_RS20420 PF02036 SCP-2 sterol transfer family RG42_RS20425 PF01136 Peptidase family U32 RG42_RS20430 PF01136 Peptidase family U32 RG42_RS20435 PF00296 Luciferase-like monooxygenase RG42_RS20440 PF03222 Tryptophan/tyrosine permease family RG42_RS20450 PF12343 Cold shock protein DEAD box A RG42_RS20450 PF00271 Helicase conserved C-terminal domain RG42_RS20450 PF03880 DbpA RNA binding domain RG42_RS20450 PF00270 DEAD/DEAH box helicase RG42_RS20460 PF13181 Tetratricopeptide repeat RG42_RS20460 PF07719 Tetratricopeptide repeat RG42_RS20465 PF03725 3' exoribonuclease family, domain 2 RG42_RS20465 PF00013 KH domain RG42_RS20465 PF00575 S1 RNA binding domain RG42_RS20465 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain RG42_RS20465 PF01138 3' exoribonuclease family, domain 1 RG42_RS20470 PF00312 Ribosomal protein S15 RG42_RS20475 PF16198 tRNA pseudouridylate synthase B C-terminal domain RG42_RS20475 PF01509 TruB family pseudouridylate synthase (N terminal domain) RG42_RS20475 PF09157 Pseudouridine synthase II TruB, C-terminal RG42_RS20480 PF02033 Ribosome-binding factor A RG42_RS20485 PF11987 Translation-initiation factor 2 RG42_RS20485 PF08364 Bacterial translation initiation factor IF-2 associated region RG42_RS20485 PF00009 Elongation factor Tu GTP binding domain RG42_RS20485 PF04760 Translation initiation factor IF-2, N-terminal region RG42_RS20490 PF08529 NusA N-terminal domain RG42_RS20490 PF13184 NusA-like KH domain RG42_RS20490 PF00575 S1 RNA binding domain RG42_RS20495 PF02576 RimP N-terminal domain RG42_RS20495 PF17384 RimP C-terminal SH3 domain RG42_RS20505 PF00764 Arginosuccinate synthase RG42_RS20510 PF00884 Sulfatase RG42_RS20525 PF03840 Preprotein translocase SecG subunit RG42_RS20530 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RG42_RS20530 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RG42_RS20530 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RG42_RS20530 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RG42_RS20535 PF00809 Pterin binding enzyme RG42_RS20540 PF06480 FtsH Extracellular RG42_RS20540 PF00004 ATPase family associated with various cellular activities (AAA) RG42_RS20540 PF01434 Peptidase family M41 RG42_RS20540 PF17862 AAA+ lid domain RG42_RS20545 PF01728 FtsJ-like methyltransferase RG42_RS20550 PF01985 CRS1 / YhbY (CRM) domain RG42_RS20555 PF03449 Transcription elongation factor, N-terminal RG42_RS20555 PF01272 Transcription elongation factor, GreA/GreB, C-term RG42_RS20560 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family RG42_RS20565 PF01018 GTP1/OBG RG42_RS20565 PF01926 50S ribosome-binding GTPase RG42_RS20570 PF00892 EamA-like transporter family RG42_RS20575 PF01016 Ribosomal L27 protein RG42_RS20580 PF00829 Ribosomal prokaryotic L21 protein RG42_RS20585 PF00348 Polyprenyl synthetase RG42_RS20590 PF13693 Winged helix-turn-helix DNA-binding RG42_RS20595 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RG42_RS20600 PF01722 BolA-like protein RG42_RS20605 PF13466 STAS domain RG42_RS20610 PF05494 MlaC protein RG42_RS20615 PF02470 MlaD protein RG42_RS20620 PF02405 Permease MlaE RG42_RS20625 PF00005 ABC transporter RG42_RS20630 PF01699 Sodium/calcium exchanger protein RG42_RS20635 PF01380 SIS domain RG42_RS20635 PF00571 CBS domain RG42_RS20645 PF06835 Lipopolysaccharide-assembly, LptC-related RG42_RS20650 PF03968 OstA-like protein RG42_RS20655 PF00005 ABC transporter RG42_RS20655 PF12399 Branched-chain amino acid ATP-binding cassette transporter RG42_RS20660 PF04552 Sigma-54, DNA binding domain RG42_RS20660 PF04963 Sigma-54 factor, core binding domain RG42_RS20660 PF00309 Sigma-54 factor, Activator interacting domain (AID) RG42_RS20665 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein RG42_RS20670 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RG42_RS20675 PF03668 P-loop ATPase protein family RG42_RS20680 PF00381 PTS HPr component phosphorylation site RG42_RS20685 PF10707 PhoP regulatory network protein YrbL RG42_RS20690 PF00912 Transglycosylase RG42_RS20700 PF00989 PAS fold RG42_RS20700 PF01627 Hpt domain RG42_RS20700 PF18415 Histidine kinase receptor ArcB trans-membrane domain RG42_RS20700 PF00512 His Kinase A (phospho-acceptor) domain RG42_RS20700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG42_RS20700 PF00072 Response regulator receiver domain RG42_RS20705 PF16199 Radical_SAM C-terminal domain RG42_RS20705 PF04055 Radical SAM superfamily RG42_RS20720 PF01493 GXGXG motif RG42_RS20720 PF01645 Conserved region in glutamate synthase RG42_RS20720 PF04898 Glutamate synthase central domain RG42_RS20720 PF00310 Glutamine amidotransferases class-II RG42_RS20725 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RG42_RS20725 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG42_RS20740 PF06551 Protein of unknown function (DUF1120) RG42_RS20745 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RG42_RS20750 PF13953 PapC C-terminal domain RG42_RS20750 PF00577 Outer membrane usher protein RG42_RS20750 PF13954 PapC N-terminal domain RG42_RS20760 PF06551 Protein of unknown function (DUF1120) RG42_RS20765 PF06250 YhcG PDDEXK nuclease domain RG42_RS20765 PF17761 DUF1016 N-terminal domain RG42_RS20770 PF04074 YhcH/YjgK/YiaL RG42_RS20775 PF00480 ROK family RG42_RS20780 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase RG42_RS20785 PF07690 Major Facilitator Superfamily RG42_RS20790 PF00701 Dihydrodipicolinate synthetase family RG42_RS20795 PF00392 Bacterial regulatory proteins, gntR family RG42_RS20795 PF07729 FCD domain RG42_RS20805 PF03606 C4-dicarboxylate anaerobic carrier RG42_RS20810 PF04386 Stringent starvation protein B RG42_RS20815 PF02798 Glutathione S-transferase, N-terminal domain RG42_RS20815 PF00043 Glutathione S-transferase, C-terminal domain RG42_RS20820 PF00380 Ribosomal protein S9/S16 RG42_RS20825 PF00572 Ribosomal protein L13 RG42_RS20830 PF03969 AFG1-like ATPase RG42_RS20835 PF06295 Protein of unknown function (DUF1043) RG42_RS20840 PF13180 PDZ domain RG42_RS20840 PF00595 PDZ domain RG42_RS20845 PF13180 PDZ domain RG42_RS20850 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain RG42_RS20850 PF00056 lactate/malate dehydrogenase, NAD binding domain RG42_RS20855 PF02863 Arginine repressor, C-terminal domain RG42_RS20855 PF01316 Arginine repressor, DNA binding domain RG42_RS20860 PF07338 Protein of unknown function (DUF1471) RG42_RS20865 PF01337 Barstar (barnase inhibitor) RG42_RS20870 PF04632 Fusaric acid resistance protein family RG42_RS20875 PF13533 Biotin-lipoyl like RG42_RS20880 PF07869 Protein of unknown function (DUF1656) RG42_RS20885 PF03466 LysR substrate binding domain RG42_RS20885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG42_RS20890 PF01523 Putative modulator of DNA gyrase RG42_RS20900 PF13116 Protein of unknown function RG42_RS20900 PF13502 AsmA-like C-terminal region RG42_RS20905 PF00575 S1 RNA binding domain RG42_RS20905 PF10150 Ribonuclease E/G family RG42_RS20910 PF02545 Maf-like protein RG42_RS20915 PF04093 rod shape-determining protein MreD RG42_RS20920 PF04085 rod shape-determining protein MreC RG42_RS20940 PF00563 EAL domain RG42_RS20940 PF17157 Gammaproteobacterial periplasmic sensor domain RG42_RS20940 PF00990 Diguanylate cyclase, GGDEF domain RG42_RS20945 PF08240 Alcohol dehydrogenase GroES-like domain RG42_RS20945 PF00107 Zinc-binding dehydrogenase RG42_RS20950 PF01794 Ferric reductase like transmembrane component RG42_RS20960 PF00364 Biotin-requiring enzyme RG42_RS20965 PF00289 Biotin carboxylase, N-terminal domain RG42_RS20965 PF02785 Biotin carboxylase C-terminal domain RG42_RS20965 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RG42_RS20970 PF06196 Protein of unknown function (DUF997) RG42_RS20975 PF00474 Sodium:solute symporter family RG42_RS20985 PF01207 Dihydrouridine synthase (Dus) RG42_RS20990 PF02954 Bacterial regulatory protein, Fis family RG42_RS20995 PF01555 DNA methylase RG42_RS21000 PF10831 Protein of unknown function (DUF2556) RG42_RS21005 PF08361 MAATS-type transcriptional repressor, C-terminal region RG42_RS21005 PF00440 Bacterial regulatory proteins, tetR family RG42_RS21015 PF00529 HlyD membrane-fusion protein of T1SS RG42_RS21015 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RG42_RS21020 PF00873 AcrB/AcrD/AcrF family RG42_RS21025 PF00873 AcrB/AcrD/AcrF family RG42_RS21040 PF00497 Bacterial extracellular solute-binding proteins, family 3 RG42_RS21045 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS21050 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS21055 PF00005 ABC transporter RG42_RS21095 PF00132 Bacterial transferase hexapeptide (six repeats) RG42_RS21100 PF07369 Protein of unknown function (DUF1488) RG42_RS21105 PF01488 Shikimate / quinate 5-dehydrogenase RG42_RS21105 PF08501 Shikimate dehydrogenase substrate binding domain RG42_RS21105 PF18317 Shikimate 5'-dehydrogenase C-terminal domain RG42_RS21110 PF01300 Telomere recombination RG42_RS21115 PF01396 Topoisomerase DNA binding C4 zinc finger RG42_RS21120 PF04361 Protein of unknown function (DUF494) RG42_RS21125 PF02481 DNA recombination-mediator protein A RG42_RS21125 PF17782 DprA winged helix domain RG42_RS21130 PF01327 Polypeptide deformylase RG42_RS21135 PF02911 Formyl transferase, C-terminal domain RG42_RS21135 PF00551 Formyl transferase RG42_RS21140 PF01029 NusB family RG42_RS21140 PF01189 16S rRNA methyltransferase RsmB/F RG42_RS21145 PF02254 TrkA-N domain RG42_RS21145 PF02080 TrkA-C domain RG42_RS21150 PF01741 Large-conductance mechanosensitive channel, MscL RG42_RS21155 PF03889 Alternative ribosome-rescue factor A RG42_RS21160 PF13411 MerR HTH family regulatory protein RG42_RS21165 PF09350 Domain of unknown function (DUF1992) RG42_RS21170 PF01196 Ribosomal protein L17 RG42_RS21175 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain RG42_RS21175 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain RG42_RS21175 PF01000 RNA polymerase Rpb3/RpoA insert domain RG42_RS21180 PF00163 Ribosomal protein S4/S9 N-terminal domain RG42_RS21180 PF01479 S4 domain RG42_RS21185 PF00411 Ribosomal protein S11 RG42_RS21190 PF00416 Ribosomal protein S13/S18 RG42_RS21195 PF00444 Ribosomal protein L36 RG42_RS21200 PF00344 SecY translocase RG42_RS21205 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A RG42_RS21210 PF00327 Ribosomal protein L30p/L7e RG42_RS21215 PF00333 Ribosomal protein S5, N-terminal domain RG42_RS21215 PF03719 Ribosomal protein S5, C-terminal domain RG42_RS21220 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast RG42_RS21225 PF00347 Ribosomal protein L6 RG42_RS21230 PF00410 Ribosomal protein S8 RG42_RS21235 PF00253 Ribosomal protein S14p/S29e RG42_RS21240 PF00281 Ribosomal protein L5 RG42_RS21240 PF00673 ribosomal L5P family C-terminus RG42_RS21245 PF00467 KOW motif RG42_RS21245 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 RG42_RS21250 PF00238 Ribosomal protein L14p/L23e RG42_RS21255 PF00366 Ribosomal protein S17 RG42_RS21260 PF00831 Ribosomal L29 protein RG42_RS21265 PF00252 Ribosomal protein L16p/L10e RG42_RS21270 PF00189 Ribosomal protein S3, C-terminal domain RG42_RS21270 PF07650 KH domain RG42_RS21275 PF00237 Ribosomal protein L22p/L17e RG42_RS21280 PF00203 Ribosomal protein S19 RG42_RS21285 PF03947 Ribosomal Proteins L2, C-terminal domain RG42_RS21285 PF00181 Ribosomal Proteins L2, RNA binding domain RG42_RS21290 PF00276 Ribosomal protein L23 RG42_RS21295 PF00573 Ribosomal protein L4/L1 family RG42_RS21300 PF00297 Ribosomal protein L3 RG42_RS21305 PF00338 Ribosomal protein S10p/S20e RG42_RS21315 PF01471 Putative peptidoglycan binding domain RG42_RS21315 PF13401 AAA domain RG42_RS21320 PF11356 Type II secretion system protein C RG42_RS21325 PF03958 Bacterial type II/III secretion system short domain RG42_RS21325 PF00263 Bacterial type II and III secretion system protein RG42_RS21330 PF00437 Type II/IV secretion system protein RG42_RS21335 PF00482 Type II secretion system (T2SS), protein F RG42_RS21340 PF08334 Type II secretion system (T2SS), protein G RG42_RS21340 PF07963 Prokaryotic N-terminal methylation motif RG42_RS21345 PF07963 Prokaryotic N-terminal methylation motif RG42_RS21345 PF12019 Type II transport protein GspH RG42_RS21350 PF02501 Type II secretion system (T2SS), protein I RG42_RS21350 PF07963 Prokaryotic N-terminal methylation motif RG42_RS21355 PF11612 Type II secretion system (T2SS), protein J RG42_RS21355 PF07963 Prokaryotic N-terminal methylation motif RG42_RS21360 PF03934 Type II secretion system (T2SS), protein K RG42_RS21365 PF05134 Type II secretion system (T2SS), protein L RG42_RS21365 PF12693 GspL periplasmic domain RG42_RS21385 PF12693 GspL periplasmic domain RG42_RS21385 PF05134 Type II secretion system (T2SS), protein L RG42_RS21390 PF04612 Type II secretion system (T2SS), protein M RG42_RS21395 PF01478 Type IV leader peptidase family RG42_RS21400 PF01478 Type IV leader peptidase family RG42_RS21405 PF00210 Ferritin-like domain RG42_RS21410 PF04324 BFD-like [2Fe-2S] binding domain RG42_RS21415 PF02839 Carbohydrate binding domain RG42_RS21420 PF03144 Elongation factor Tu domain 2 RG42_RS21420 PF03143 Elongation factor Tu C-terminal domain RG42_RS21420 PF00009 Elongation factor Tu GTP binding domain RG42_RS21425 PF00679 Elongation factor G C-terminus RG42_RS21425 PF14492 Elongation Factor G, domain II RG42_RS21425 PF00009 Elongation factor Tu GTP binding domain RG42_RS21425 PF03764 Elongation factor G, domain IV RG42_RS21425 PF03144 Elongation factor Tu domain 2 RG42_RS21430 PF00177 Ribosomal protein S7p/S5e RG42_RS21435 PF00164 Ribosomal protein S12/S23 RG42_RS21440 PF04077 DsrH like protein RG42_RS21445 PF02635 DsrE/DsrF-like family RG42_RS21450 PF02635 DsrE/DsrF-like family RG42_RS21455 PF08348 YheO-like PAS domain RG42_RS21455 PF13309 HTH domain RG42_RS21460 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RG42_RS21460 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase RG42_RS21465 PF04102 SlyX RG42_RS21470 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RG42_RS21475 PF09526 Probable metal-binding protein (DUF2387) RG42_RS21480 PF00999 Sodium/hydrogen exchanger family RG42_RS21480 PF02254 TrkA-N domain RG42_RS21485 PF02525 Flavodoxin-like fold RG42_RS21495 PF12848 ABC transporter RG42_RS21495 PF00005 ABC transporter RG42_RS21500 PF00561 alpha/beta hydrolase fold RG42_RS21505 PF06794 Uncharacterised protein family (UPF0270) RG42_RS21510 PF00485 Phosphoribulokinase / Uridine kinase family RG42_RS21515 PF02566 OsmC-like protein RG42_RS21525 PF00027 Cyclic nucleotide-binding domain RG42_RS21525 PF13545 Crp-like helix-turn-helix domain RG42_RS21530 PF12805 FUSC-like inner membrane protein yccS RG42_RS21535 PF00202 Aminotransferase class-III RG42_RS21540 PF00117 Glutamine amidotransferase class-I RG42_RS21545 PF02661 Fic/DOC family RG42_RS21550 PF10832 Protein of unknown function (DUF2559) RG42_RS21555 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RG42_RS21560 PF07690 Major Facilitator Superfamily RG42_RS21565 PF04324 BFD-like [2Fe-2S] binding domain RG42_RS21565 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RG42_RS21565 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RG42_RS21565 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG42_RS21565 PF18267 Rubredoxin NAD+ reductase C-terminal domain RG42_RS21570 PF13806 Rieske-like [2Fe-2S] domain RG42_RS21575 PF01226 Formate/nitrite transporter RG42_RS21580 PF14824 Sirohaem biosynthesis protein central RG42_RS21580 PF10414 Sirohaem synthase dimerisation region RG42_RS21580 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RG42_RS21585 PF13978 Protein of unknown function (DUF4223) RG42_RS21590 PF13520 Amino acid permease RG42_RS21595 PF01380 SIS domain RG42_RS21600 PF01261 Xylose isomerase-like TIM barrel RG42_RS21605 PF01261 Xylose isomerase-like TIM barrel RG42_RS21610 PF00294 pfkB family carbohydrate kinase RG42_RS21615 PF00392 Bacterial regulatory proteins, gntR family RG42_RS21615 PF07702 UTRA domain RG42_RS21620 PF00155 Aminotransferase class I and II RG42_RS21625 PF10797 Protein of unknown function RG42_RS21630 PF10941 Protein of unknown function DUF2620 RG42_RS21635 PF02126 Phosphotriesterase family RG42_RS21640 PF01676 Metalloenzyme superfamily RG42_RS21645 PF01168 Alanine racemase, N-terminal domain RG42_RS21655 PF14502 Helix-turn-helix domain RG42_RS21655 PF14503 YhfZ C-terminal domain RG42_RS21665 PF00579 tRNA synthetases class I (W and Y) RG42_RS21670 PF13419 Haloacid dehalogenase-like hydrolase RG42_RS21675 PF00834 Ribulose-phosphate 3 epimerase family RG42_RS21680 PF02086 D12 class N6 adenine-specific DNA methyltransferase RG42_RS21685 PF05036 Sporulation related domain RG42_RS21690 PF01761 3-dehydroquinate synthase RG42_RS21695 PF01202 Shikimate kinase RG42_RS21700 PF00263 Bacterial type II and III secretion system protein RG42_RS21700 PF03958 Bacterial type II/III secretion system short domain RG42_RS21705 PF10748 DNA utilization proteins HofP RG42_RS21715 PF05137 Fimbrial assembly protein (PilN) RG42_RS21725 PF00905 Penicillin binding protein transpeptidase domain RG42_RS21725 PF17092 Penicillin-binding protein OB-like domain RG42_RS21725 PF00912 Transglycosylase RG42_RS21730 PF00293 NUDIX domain RG42_RS21735 PF07095 Intracellular growth attenuator protein IgaA RG42_RS21740 PF13419 Haloacid dehalogenase-like hydrolase RG42_RS21745 PF01479 S4 domain RG42_RS21750 PF01430 Hsp33 protein RG42_RS21755 PF13687 Domain of unknown function (DUF4153) RG42_RS21765 PF01293 Phosphoenolpyruvate carboxykinase RG42_RS21770 PF00672 HAMP domain RG42_RS21770 PF00512 His Kinase A (phospho-acceptor) domain RG42_RS21770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG42_RS21775 PF00072 Response regulator receiver domain RG42_RS21775 PF00486 Transcriptional regulatory protein, C terminal RG42_RS21785 PF01272 Transcription elongation factor, GreA/GreB, C-term RG42_RS21785 PF03449 Transcription elongation factor, N-terminal RG42_RS21790 PF09371 Tex-like protein N-terminal domain RG42_RS21790 PF00575 S1 RNA binding domain RG42_RS21790 PF17674 HHH domain RG42_RS21790 PF16921 Tex protein YqgF-like domain RG42_RS21800 PF04023 FeoA domain RG42_RS21805 PF02421 Ferrous iron transport protein B RG42_RS21805 PF07670 Nucleoside recognition RG42_RS21805 PF17910 FeoB cytosolic helical domain RG42_RS21805 PF07664 Ferrous iron transport protein B C terminus RG42_RS21810 PF09012 FeoC like transcriptional regulator RG42_RS21820 PF04754 Putative transposase, YhgA-like RG42_RS21825 PF00561 alpha/beta hydrolase fold RG42_RS21830 PF00156 Phosphoribosyl transferase domain RG42_RS21835 PF01106 NifU-like domain RG42_RS21835 PF01521 Iron-sulphur cluster biosynthesis RG42_RS21840 PF02447 GntP family permease RG42_RS21845 PF02446 4-alpha-glucanotransferase RG42_RS21850 PF00343 Carbohydrate phosphorylase RG42_RS21855 PF17874 MalT-like TPR region RG42_RS21855 PF00196 Bacterial regulatory proteins, luxR family RG42_RS21860 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain RG42_RS21860 PF01137 RNA 3'-terminal phosphate cyclase RG42_RS21865 PF01139 tRNA-splicing ligase RtcB RG42_RS21870 PF06956 Regulator of RNA terminal phosphate cyclase RG42_RS21870 PF00158 Sigma-54 interaction domain RG42_RS21875 PF00455 DeoR C terminal sensor domain RG42_RS21875 PF08220 DeoR-like helix-turn-helix domain RG42_RS21880 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease RG42_RS21880 PF01694 Rhomboid family RG42_RS21885 PF00581 Rhodanese-like domain RG42_RS21890 PF16901 C-terminal domain of alpha-glycerophosphate oxidase RG42_RS21890 PF01266 FAD dependent oxidoreductase RG42_RS21900 PF00343 Carbohydrate phosphorylase RG42_RS21905 PF08323 Starch synthase catalytic domain RG42_RS21905 PF00534 Glycosyl transferases group 1 RG42_RS21910 PF00483 Nucleotidyl transferase RG42_RS21915 PF18390 Glycogen debranching enzyme C-terminal domain RG42_RS21915 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RG42_RS21915 PF00128 Alpha amylase, catalytic domain RG42_RS21920 PF02806 Alpha amylase, C-terminal all-beta domain RG42_RS21920 PF00128 Alpha amylase, catalytic domain RG42_RS21920 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RG42_RS21925 PF02774 Semialdehyde dehydrogenase, dimerisation domain RG42_RS21925 PF01118 Semialdehyde dehydrogenase, NAD binding domain RG42_RS21930 PF01914 MarC family integral membrane protein RG42_RS21935 PF02447 GntP family permease RG42_RS21940 PF01202 Shikimate kinase RG42_RS21945 PF00356 Bacterial regulatory proteins, lacI family RG42_RS21945 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RG42_RS21950 PF02678 Pirin RG42_RS21950 PF17954 Quercetinase C-terminal cupin domain RG42_RS21955 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RG42_RS21955 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RG42_RS21960 PF00583 Acetyltransferase (GNAT) family RG42_RS21965 PF05638 Type VI secretion system effector, Hcp RG42_RS21980 PF15567 Immunity protein 35 RG42_RS21990 PF10956 Protein of unknown function (DUF2756) RG42_RS21995 PF03009 Glycerophosphoryl diester phosphodiesterase family RG42_RS22000 PF17912 MalK OB fold domain RG42_RS22000 PF00005 ABC transporter RG42_RS22005 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS22010 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS22015 PF13416 Bacterial extracellular solute-binding protein RG42_RS22020 PF00005 ABC transporter RG42_RS22025 PF00005 ABC transporter RG42_RS22025 PF12399 Branched-chain amino acid ATP-binding cassette transporter RG42_RS22030 PF11862 Domain of unknown function (DUF3382) RG42_RS22030 PF02653 Branched-chain amino acid transport system / permease component RG42_RS22035 PF02653 Branched-chain amino acid transport system / permease component RG42_RS22040 PF13458 Periplasmic binding protein RG42_RS22050 PF12568 Acetyltransferase (GNAT) domain, PanZ RG42_RS22055 PF13458 Periplasmic binding protein RG42_RS22060 PF04545 Sigma-70, region 4 RG42_RS22060 PF04542 Sigma-70 region 2 RG42_RS22065 PF18075 FtsX extracellular domain RG42_RS22065 PF02687 FtsX-like permease family RG42_RS22070 PF00005 ABC transporter RG42_RS22075 PF00448 SRP54-type protein, GTPase domain RG42_RS22075 PF02881 SRP54-type protein, helical bundle domain RG42_RS22085 PF06611 Protein of unknown function (DUF1145) RG42_RS22090 PF10694 Protein of unknown function (DUF2500) RG42_RS22095 PF07947 YhhN family RG42_RS22100 PF00403 Heavy-metal-associated domain RG42_RS22105 PF01206 Sulfurtransferase TusA RG42_RS22110 PF02592 Putative vitamin uptake transporter RG42_RS22115 PF08786 DcrB RG42_RS22120 PF07690 Major Facilitator Superfamily RG42_RS22125 PF01594 AI-2E family transporter RG42_RS22130 PF01648 4'-phosphopantetheinyl transferase superfamily RG42_RS22135 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RG42_RS22140 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS22145 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS22150 PF00005 ABC transporter RG42_RS22155 PF00005 ABC transporter RG42_RS22160 PF01402 Ribbon-helix-helix protein, copG family RG42_RS22160 PF08753 NikR C terminal nickel binding domain RG42_RS22170 PF05593 RHS Repeat RG42_RS22170 PF03527 RHS protein RG42_RS22170 PF14220 Domain of unknown function (DUF4329) RG42_RS22175 PF15631 NTF2 fold immunity protein RG42_RS22180 PF03130 PBS lyase HEAT-like repeat RG42_RS22185 PF01609 Transposase DDE domain RG42_RS22185 PF13808 DDE_Tnp_1-associated RG42_RS22195 PF00005 ABC transporter RG42_RS22200 PF13533 Biotin-lipoyl like RG42_RS22205 PF13258 Domain of unknown function (DUF4049) RG42_RS22210 PF13258 Domain of unknown function (DUF4049) RG42_RS22215 PF13258 Domain of unknown function (DUF4049) RG42_RS22230 PF10951 Protein of unknown function (DUF2776) RG42_RS22240 PF01384 Phosphate transporter family RG42_RS22250 PF10625 Universal stress protein B (UspB) RG42_RS22255 PF00582 Universal stress protein family RG42_RS22265 PF00854 POT family RG42_RS22270 PF04445 Putative SAM-dependent methyltransferase RG42_RS22275 PF01432 Peptidase family M3 RG42_RS22280 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ RG42_RS22285 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RG42_RS22285 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG42_RS22300 PF01022 Bacterial regulatory protein, arsR family RG42_RS22305 PF02040 Arsenical pump membrane protein RG42_RS22310 PF03960 ArsC family RG42_RS22320 PF03843 Outer membrane lipoprotein Slp family RG42_RS22330 PF00196 Bacterial regulatory proteins, luxR family RG42_RS22335 PF02308 MgtC family RG42_RS22340 PF06411 HdeA/HdeB family RG42_RS22345 PF06411 HdeA/HdeB family RG42_RS22350 PF03729 Short repeat of unknown function (DUF308) RG42_RS22355 PF00196 Bacterial regulatory proteins, luxR family RG42_RS22365 PF00529 HlyD membrane-fusion protein of T1SS RG42_RS22365 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RG42_RS22370 PF00873 AcrB/AcrD/AcrF family RG42_RS22380 PF12833 Helix-turn-helix domain RG42_RS22385 PF12833 Helix-turn-helix domain RG42_RS22390 PF00282 Pyridoxal-dependent decarboxylase conserved domain RG42_RS22395 PF03150 Di-haem cytochrome c peroxidase RG42_RS22395 PF00034 Cytochrome c RG42_RS22395 PF14376 Haem-binding domain RG42_RS22400 PF01204 Trehalase RG42_RS22405 PF00196 Bacterial regulatory proteins, luxR family RG42_RS22410 PF03466 LysR substrate binding domain RG42_RS22410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG42_RS22415 PF03631 Virulence factor BrkB RG42_RS22420 PF00083 Sugar (and other) transporter RG42_RS22420 PF07690 Major Facilitator Superfamily RG42_RS22425 PF05170 AsmA family RG42_RS22430 PF00563 EAL domain RG42_RS22440 PF00294 pfkB family carbohydrate kinase RG42_RS22445 PF00675 Insulinase (Peptidase family M16) RG42_RS22445 PF05193 Peptidase M16 inactive domain RG42_RS22455 PF00375 Sodium:dicarboxylate symporter family RG42_RS22465 PF00563 EAL domain RG42_RS22465 PF17154 Gammaproteobacterial periplasmic sensor domain RG42_RS22465 PF00672 HAMP domain RG42_RS22465 PF00990 Diguanylate cyclase, GGDEF domain RG42_RS22470 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) RG42_RS22475 PF01270 Glycosyl hydrolases family 8 RG42_RS22480 PF03170 Bacterial cellulose synthase subunit RG42_RS22485 PF07238 PilZ domain RG42_RS22485 PF03552 Cellulose synthase RG42_RS22485 PF00535 Glycosyl transferase family 2 RG42_RS22490 PF06564 Cellulose biosynthesis protein BcsQ RG42_RS22495 PF10945 Cellulose biosynthesis protein BcsR RG42_RS22500 PF10995 Cellulose biosynthesis GIL RG42_RS22505 PF11120 Cellulose biosynthesis protein BcsF RG42_RS22515 PF13940 Toxin Ldr, type I toxin-antitoxin system RG42_RS22530 PF03222 Tryptophan/tyrosine permease family RG42_RS22535 PF00005 ABC transporter RG42_RS22535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RG42_RS22540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RG42_RS22540 PF00005 ABC transporter RG42_RS22545 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS22545 PF12911 N-terminal TM domain of oligopeptide transport permease C RG42_RS22550 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS22560 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RG42_RS22580 PF08019 Phosphoethanolamine transferase EptA/EptB RG42_RS22580 PF00884 Sulfatase RG42_RS22585 PF07690 Major Facilitator Superfamily RG42_RS22595 PF03797 Autotransporter beta-domain RG42_RS22600 PF03352 Methyladenine glycosylase RG42_RS22605 PF00583 Acetyltransferase (GNAT) family RG42_RS22610 PF18364 Molybdopterin oxidoreductase N-terminal domain RG42_RS22610 PF00384 Molybdopterin oxidoreductase RG42_RS22610 PF01568 Molydopterin dinucleotide binding domain RG42_RS22615 PF00691 OmpA family RG42_RS22615 PF13488 Glycine zipper RG42_RS22620 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RG42_RS22620 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RG42_RS22625 PF11254 Protein of unknown function (DUF3053) RG42_RS22630 PF01381 Helix-turn-helix RG42_RS22635 PF00313 'Cold-shock' DNA-binding domain RG42_RS22640 PF01848 Hok/gef family RG42_RS22650 PF13333 Integrase core domain RG42_RS22650 PF00665 Integrase core domain RG42_RS22650 PF13276 HTH-like domain RG42_RS22655 PF05746 DALR anticodon binding domain RG42_RS22655 PF02092 Glycyl-tRNA synthetase beta subunit RG42_RS22660 PF02091 Glycyl-tRNA synthetase alpha subunit RG42_RS22665 PF13983 YsaB-like lipoprotein RG42_RS22670 PF01757 Acyltransferase family RG42_RS22675 PF05360 yiaA/B two helix domain RG42_RS22680 PF05360 yiaA/B two helix domain RG42_RS22685 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RG42_RS22685 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RG42_RS22695 PF13407 Periplasmic binding protein domain RG42_RS22700 PF00005 ABC transporter RG42_RS22705 PF02653 Branched-chain amino acid transport system / permease component RG42_RS22710 PF12833 Helix-turn-helix domain RG42_RS22715 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase RG42_RS22720 PF00128 Alpha amylase, catalytic domain RG42_RS22725 PF00155 Aminotransferase class I and II RG42_RS22730 PF13247 4Fe-4S dicluster domain RG42_RS22735 PF01614 Bacterial transcriptional regulator RG42_RS22735 PF09339 IclR helix-turn-helix domain RG42_RS22740 PF02615 Malate/L-lactate dehydrogenase RG42_RS22745 PF04074 YhcH/YjgK/YiaL RG42_RS22750 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component RG42_RS22755 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RG42_RS22760 PF03480 Bacterial extracellular solute-binding protein, family 7 RG42_RS22765 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RG42_RS22765 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RG42_RS22770 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RG42_RS22775 PF01261 Xylose isomerase-like TIM barrel RG42_RS22780 PF00596 Class II Aldolase and Adducin N-terminal domain RG42_RS22785 PF06629 MltA-interacting protein MipA RG42_RS22790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG42_RS22790 PF03466 LysR substrate binding domain RG42_RS22795 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RG42_RS22795 PF00529 HlyD membrane-fusion protein of T1SS RG42_RS22800 PF11742 Protein of unknown function (DUF3302) RG42_RS22810 PF00171 Aldehyde dehydrogenase family RG42_RS22815 PF00465 Iron-containing alcohol dehydrogenase RG42_RS22820 PF09107 Elongation factor SelB, winged helix RG42_RS22820 PF09106 Elongation factor SelB, winged helix RG42_RS22820 PF00009 Elongation factor Tu GTP binding domain RG42_RS22820 PF03144 Elongation factor Tu domain 2 RG42_RS22825 PF03841 L-seryl-tRNA selenium transferase RG42_RS22825 PF12390 Selenocysteine synthase N terminal RG42_RS22830 PF00043 Glutathione S-transferase, C-terminal domain RG42_RS22830 PF13417 Glutathione S-transferase, N-terminal domain RG42_RS22840 PF03130 PBS lyase HEAT-like repeat RG42_RS22845 PF03527 RHS protein RG42_RS22870 PF15596 Immunity protein 57 RG42_RS22875 PF00529 HlyD membrane-fusion protein of T1SS RG42_RS22875 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RG42_RS22880 PF11742 Protein of unknown function (DUF3302) RG42_RS22885 PF02378 Phosphotransferase system, EIIC RG42_RS22885 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RG42_RS22885 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RG42_RS22890 PF01232 Mannitol dehydrogenase Rossmann domain RG42_RS22890 PF08125 Mannitol dehydrogenase C-terminal domain RG42_RS22895 PF05068 Mannitol repressor RG42_RS22905 PF10928 Protein of unknown function (DUF2810) RG42_RS22915 PF02652 L-lactate permease RG42_RS22920 PF00392 Bacterial regulatory proteins, gntR family RG42_RS22920 PF07729 FCD domain RG42_RS22925 PF01070 FMN-dependent dehydrogenase RG42_RS22930 PF00588 SpoU rRNA Methylase family RG42_RS22935 PF00132 Bacterial transferase hexapeptide (six repeats) RG42_RS22935 PF06426 Serine acetyltransferase, N-terminal RG42_RS22940 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus RG42_RS22940 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus RG42_RS22945 PF02556 Preprotein translocase subunit SecB RG42_RS22950 PF00462 Glutaredoxin RG42_RS22955 PF00581 Rhodanese-like domain RG42_RS22965 PF06415 BPG-independent PGAM N-terminus (iPGM_N) RG42_RS22965 PF01676 Metalloenzyme superfamily RG42_RS22970 PF01551 Peptidase family M23 RG42_RS22975 PF04748 Divergent polysaccharide deacetylase RG42_RS22980 PF00535 Glycosyl transferase family 2 RG42_RS22985 PF08240 Alcohol dehydrogenase GroES-like domain RG42_RS22985 PF00107 Zinc-binding dehydrogenase RG42_RS22990 PF00155 Aminotransferase class I and II RG42_RS22995 PF01370 NAD dependent epimerase/dehydratase family RG42_RS23000 PF01075 Glycosyltransferase family 9 (heptosyltransferase) RG42_RS23005 PF01075 Glycosyltransferase family 9 (heptosyltransferase) RG42_RS23010 PF04932 O-Antigen ligase RG42_RS23015 PF00534 Glycosyl transferases group 1 RG42_RS23025 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) RG42_RS23030 PF08437 Glycosyl transferase family 8 C-terminal RG42_RS23030 PF01501 Glycosyl transferase family 8 RG42_RS23035 PF01501 Glycosyl transferase family 8 RG42_RS23035 PF08437 Glycosyl transferase family 8 C-terminal RG42_RS23040 PF00534 Glycosyl transferases group 1 RG42_RS23040 PF13439 Glycosyltransferase Family 4 RG42_RS23045 PF01501 Glycosyl transferase family 8 RG42_RS23045 PF08437 Glycosyl transferase family 8 C-terminal RG42_RS23055 PF00534 Glycosyl transferases group 1 RG42_RS23055 PF13439 Glycosyltransferase Family 4 RG42_RS23060 PF01075 Glycosyltransferase family 9 (heptosyltransferase) RG42_RS23065 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) RG42_RS23070 PF01467 Cytidylyltransferase-like RG42_RS23075 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain RG42_RS23075 PF06827 Zinc finger found in FPG and IleRS RG42_RS23075 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain RG42_RS23080 PF00471 Ribosomal protein L33 RG42_RS23085 PF00830 Ribosomal L28 family RG42_RS23090 PF04002 RadC-like JAB domain RG42_RS23095 PF04127 DNA / pantothenate metabolism flavoprotein RG42_RS23095 PF02441 Flavoprotein RG42_RS23100 PF00692 dUTPase RG42_RS23105 PF00440 Bacterial regulatory proteins, tetR family RG42_RS23110 PF00156 Phosphoribosyl transferase domain RG42_RS23115 PF03725 3' exoribonuclease family, domain 2 RG42_RS23115 PF01138 3' exoribonuclease family, domain 1 RG42_RS23125 PF03755 YicC-like family, N-terminal region RG42_RS23125 PF08340 Domain of unknown function (DUF1732) RG42_RS23135 PF03458 UPF0126 domain RG42_RS23140 PF03120 NAD-dependent DNA ligase OB-fold domain RG42_RS23140 PF01653 NAD-dependent DNA ligase adenylation domain RG42_RS23145 PF00625 Guanylate kinase RG42_RS23150 PF01192 RNA polymerase Rpb6 RG42_RS23155 PF02824 TGS domain RG42_RS23155 PF13291 ACT domain RG42_RS23155 PF04607 Region found in RelA / SpoT proteins RG42_RS23160 PF00588 SpoU rRNA Methylase family RG42_RS23160 PF12105 SpoU, rRNA methylase, C-terminal RG42_RS23165 PF17191 RecG wedge domain RG42_RS23165 PF00271 Helicase conserved C-terminal domain RG42_RS23165 PF00270 DEAD/DEAH box helicase RG42_RS23170 PF03616 Sodium/glutamate symporter RG42_RS23175 PF00860 Permease family RG42_RS23180 PF05170 AsmA family RG42_RS23185 PF01055 Glycosyl hydrolases family 31 RG42_RS23185 PF13802 Galactose mutarotase-like RG42_RS23205 PF07690 Major Facilitator Superfamily RG42_RS23210 PF00892 EamA-like transporter family RG42_RS23215 PF03180 NLPA lipoprotein RG42_RS23235 PF07690 Major Facilitator Superfamily RG42_RS23245 PF06711 Protein of unknown function (DUF1198) RG42_RS23250 PF00860 Permease family RG42_RS23255 PF01979 Amidohydrolase family RG42_RS23255 PF13382 Adenine deaminase C-terminal domain RG42_RS23260 PF07690 Major Facilitator Superfamily RG42_RS23265 PF07690 Major Facilitator Superfamily RG42_RS23270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG42_RS23270 PF07730 Histidine kinase RG42_RS23270 PF05231 MASE1 RG42_RS23275 PF00072 Response regulator receiver domain RG42_RS23275 PF00196 Bacterial regulatory proteins, luxR family RG42_RS23280 PF01842 ACT domain RG42_RS23285 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RG42_RS23285 PF00205 Thiamine pyrophosphate enzyme, central domain RG42_RS23285 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RG42_RS23290 PF08049 IlvB leader peptide RG42_RS23310 PF13939 Toxin TisB, type I toxin-antitoxin system RG42_RS23320 PF07690 Major Facilitator Superfamily RG42_RS23330 PF02656 Domain of unknown function (DUF202) RG42_RS23335 PF02656 Domain of unknown function (DUF202) RG42_RS23345 PF16347 Domain of unknown function (DUF4976) RG42_RS23345 PF00884 Sulfatase RG42_RS23350 PF00474 Sodium:solute symporter family RG42_RS23355 PF02311 AraC-like ligand binding domain RG42_RS23355 PF12833 Helix-turn-helix domain RG42_RS23360 PF02056 Family 4 glycosyl hydrolase RG42_RS23360 PF11975 Family 4 glycosyl hydrolase C-terminal domain RG42_RS23365 PF02056 Family 4 glycosyl hydrolase RG42_RS23370 PF00367 phosphotransferase system, EIIB RG42_RS23370 PF02378 Phosphotransferase system, EIIC RG42_RS23375 PF07702 UTRA domain RG42_RS23375 PF00392 Bacterial regulatory proteins, gntR family RG42_RS23380 PF06826 Predicted Permease Membrane Region RG42_RS23380 PF02080 TrkA-C domain RG42_RS23385 PF00011 Hsp20/alpha crystallin family RG42_RS23390 PF00011 Hsp20/alpha crystallin family RG42_RS23395 PF07119 Protein of unknown function (DUF1375) RG42_RS23400 PF12566 Protein of unknown function (DUF3748) RG42_RS23400 PF07676 WD40-like Beta Propeller Repeat RG42_RS23405 PF01494 FAD binding domain RG42_RS23410 PF07690 Major Facilitator Superfamily RG42_RS23415 PF13378 Enolase C-terminal domain-like RG42_RS23415 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RG42_RS23420 PF01081 KDPG and KHG aldolase RG42_RS23425 PF05035 2-keto-3-deoxy-galactonokinase RG42_RS23430 PF00392 Bacterial regulatory proteins, gntR family RG42_RS23430 PF07729 FCD domain RG42_RS23445 PF06078 Bacterial protein of unknown function (DUF937) RG42_RS23450 PF00986 DNA gyrase B subunit, carboxyl terminus RG42_RS23450 PF18053 DNA gyrase B subunit insert domain RG42_RS23450 PF01751 Toprim domain RG42_RS23450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG42_RS23450 PF00204 DNA gyrase B RG42_RS23455 PF02463 RecF/RecN/SMC N terminal domain RG42_RS23460 PF00712 DNA polymerase III beta subunit, N-terminal domain RG42_RS23460 PF02767 DNA polymerase III beta subunit, central domain RG42_RS23460 PF02768 DNA polymerase III beta subunit, C-terminal domain RG42_RS23465 PF00308 Bacterial dnaA protein RG42_RS23465 PF08299 Bacterial dnaA protein helix-turn-helix RG42_RS23465 PF11638 DnaA N-terminal domain RG42_RS23475 PF00468 Ribosomal protein L34 RG42_RS23480 PF00825 Ribonuclease P RG42_RS23485 PF01809 Putative membrane protein insertion efficiency factor RG42_RS23490 PF14849 YidC periplasmic domain RG42_RS23490 PF02096 60Kd inner membrane protein RG42_RS23495 PF10396 GTP-binding protein TrmE N-terminus RG42_RS23495 PF12631 MnmE helical domain RG42_RS23495 PF01926 50S ribosome-binding GTPase RG42_RS23500 PF08053 Tryptophanase operon leader peptide RG42_RS23505 PF01212 Beta-eliminating lyase RG42_RS23510 PF03222 Tryptophan/tyrosine permease family RG42_RS23515 PF07690 Major Facilitator Superfamily RG42_RS23520 PF03466 LysR substrate binding domain RG42_RS23520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG42_RS23530 PF03358 NADPH-dependent FMN reductase RG42_RS23535 PF00860 Permease family RG42_RS23540 PF13419 Haloacid dehalogenase-like hydrolase RG42_RS23550 PF03691 Uncharacterised protein family (UPF0167) RG42_RS23555 PF03050 Transposase IS66 family RG42_RS23555 PF13817 IS66 C-terminal element RG42_RS23555 PF13007 Transposase C of IS166 homeodomain RG42_RS23555 PF13005 zinc-finger binding domain of transposase IS66 RG42_RS23560 PF03050 Transposase IS66 family RG42_RS23560 PF13817 IS66 C-terminal element RG42_RS23560 PF13005 zinc-finger binding domain of transposase IS66 RG42_RS23560 PF13007 Transposase C of IS166 homeodomain RG42_RS23565 PF05717 IS66 Orf2 like protein RG42_RS23575 PF03691 Uncharacterised protein family (UPF0167) RG42_RS23580 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase RG42_RS23585 PF00756 Putative esterase RG42_RS23585 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RG42_RS23590 PF02264 LamB porin RG42_RS23590 PF11471 Maltoporin periplasmic N-terminal extension RG42_RS23595 PF00232 Glycosyl hydrolase family 1 RG42_RS23600 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RG42_RS23600 PF00367 phosphotransferase system, EIIB RG42_RS23600 PF02378 Phosphotransferase system, EIIC RG42_RS23605 PF03123 CAT RNA binding domain RG42_RS23605 PF00874 PRD domain RG42_RS23610 PF01895 PhoU domain RG42_RS23615 PF00005 ABC transporter RG42_RS23620 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS23625 PF00528 Binding-protein-dependent transport system inner membrane component RG42_RS23630 PF12849 PBP superfamily domain RG42_RS23635 PF01380 SIS domain RG42_RS23640 PF00132 Bacterial transferase hexapeptide (six repeats) RG42_RS23640 PF14602 Hexapeptide repeat of succinyl-transferase RG42_RS23640 PF12804 MobA-like NTP transferase domain RG42_RS23645 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain RG42_RS23645 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain RG42_RS23650 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RG42_RS23650 PF02874 ATP synthase alpha/beta family, beta-barrel domain RG42_RS23655 PF00231 ATP synthase RG42_RS23660 PF00306 ATP synthase alpha/beta chain, C terminal domain RG42_RS23660 PF02874 ATP synthase alpha/beta family, beta-barrel domain RG42_RS23660 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RG42_RS23665 PF00213 ATP synthase delta (OSCP) subunit RG42_RS23670 PF00430 ATP synthase B/B' CF(0) RG42_RS23675 PF00137 ATP synthase subunit C RG42_RS23680 PF00119 ATP synthase A chain RG42_RS23685 PF03899 ATP synthase I chain RG42_RS23690 PF02527 rRNA small subunit methyltransferase G RG42_RS23695 PF01134 Glucose inhibited division protein A RG42_RS23695 PF13932 GidA associated domain RG42_RS23700 PF00258 Flavodoxin RG42_RS23705 PF01037 Lrp/AsnC ligand binding domain RG42_RS23710 PF03590 Aspartate-ammonia ligase RG42_RS23715 PF05762 VWA domain containing CoxE-like protein RG42_RS23720 PF12592 Protein of unknown function (DUF3763) RG42_RS23720 PF07728 AAA domain (dynein-related subfamily) RG42_RS23720 PF17868 AAA lid domain RG42_RS23725 PF02705 K+ potassium transporter RG42_RS23730 PF05025 RbsD / FucU transport protein family RG42_RS23735 PF00005 ABC transporter RG42_RS23740 PF02653 Branched-chain amino acid transport system / permease component RG42_RS23745 PF13407 Periplasmic binding protein domain RG42_RS23750 PF00294 pfkB family carbohydrate kinase RG42_RS23755 PF00356 Bacterial regulatory proteins, lacI family RG42_RS23760 PF07690 Major Facilitator Superfamily RG42_RS23765 PF00392 Bacterial regulatory proteins, gntR family RG42_RS23765 PF07729 FCD domain RG42_RS23805 PF03466 LysR substrate binding domain RG42_RS23805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG42_RS23810 PF04219 Protein of unknown function, DUF RG42_RS23815 PF13335 Magnesium chelatase, subunit ChlI C-terminal RG42_RS23815 PF01078 Magnesium chelatase, subunit ChlI RG42_RS23820 PF08046 IlvGEDA operon leader peptide RG42_RS23825 PF00205 Thiamine pyrophosphate enzyme, central domain RG42_RS23825 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RG42_RS23825 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RG42_RS23835 PF01063 Amino-transferase class IV RG42_RS23840 PF00920 Dehydratase family RG42_RS23845 PF00291 Pyridoxal-phosphate dependent enzyme RG42_RS23845 PF00585 C-terminal regulatory domain of Threonine dehydratase RG42_RS23850 PF03466 LysR substrate binding domain RG42_RS23850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG42_RS23855 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain RG42_RS23855 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain RG42_RS23865 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system RG42_RS23870 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system RG42_RS23875 PF00580 UvrD/REP helicase N-terminal domain RG42_RS23875 PF13361 UvrD-like helicase C-terminal domain RG42_RS23880 PF02541 Ppx/GppA phosphatase family RG42_RS23890 PF00270 DEAD/DEAH box helicase RG42_RS23890 PF00271 Helicase conserved C-terminal domain RG42_RS23895 PF00085 Thioredoxin RG42_RS23905 PF07497 Rho termination factor, RNA-binding domain RG42_RS23905 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RG42_RS23905 PF07498 Rho termination factor, N-terminal domain RG42_RS23915 PF00953 Glycosyl transferase family 4 RG42_RS23920 PF02706 Chain length determinant protein RG42_RS23925 PF02350 UDP-N-acetylglucosamine 2-epimerase RG42_RS23930 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RG42_RS23930 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RG42_RS23930 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RG42_RS23935 PF16363 GDP-mannose 4,6 dehydratase RG42_RS23940 PF00483 Nucleotidyl transferase RG42_RS23950 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RG42_RS23955 PF01943 Polysaccharide biosynthesis protein RG42_RS23960 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 RG42_RS23965 PF06899 WzyE protein, O-antigen assembly polymerase RG42_RS23970 PF03808 Glycosyl transferase WecB/TagA/CpsF family RG42_RS23975 PF00324 Amino acid permease RG42_RS24000 PF04055 Radical SAM superfamily RG42_RS24000 PF13186 Iron-sulfur cluster-binding domain RG42_RS24010 PF00884 Sulfatase RG42_RS24015 PF07719 Tetratricopeptide repeat RG42_RS24015 PF07219 HemY protein N-terminus RG42_RS24020 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase RG42_RS24025 PF02602 Uroporphyrinogen-III synthase HemD RG42_RS24030 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain RG42_RS24030 PF03900 Porphobilinogen deaminase, C-terminal domain RG42_RS24040 PF12633 Adenylate cyclase NT domain RG42_RS24040 PF01295 Adenylate cyclase, class-I RG42_RS24045 PF01491 Frataxin-like domain RG42_RS24055 PF13627 Prokaryotic lipoprotein-attachment site RG42_RS24060 PF01678 Diaminopimelate epimerase RG42_RS24065 PF04340 Protein of unknown function, DUF484 RG42_RS24070 PF00589 Phage integrase family RG42_RS24070 PF02899 Phage integrase, N-terminal SAM-like domain RG42_RS24075 PF13419 Haloacid dehalogenase-like hydrolase RG42_RS24080 PF00580 UvrD/REP helicase N-terminal domain RG42_RS24080 PF13361 UvrD-like helicase C-terminal domain RG42_RS24085 PF09992 Phosphodiester glycosidase RG42_RS24095 PF01544 CorA-like Mg2+ transporter protein RG42_RS24100 PF10947 Protein of unknown function (DUF2628) RG42_RS24110 PF00892 EamA-like transporter family RG42_RS24115 PF03061 Thioesterase superfamily RG42_RS24120 PF02253 Phospholipase A1 RG42_RS24125 PF00271 Helicase conserved C-terminal domain RG42_RS24125 PF09382 RQC domain RG42_RS24125 PF00270 DEAD/DEAH box helicase RG42_RS24125 PF16124 RecQ zinc-binding RG42_RS24125 PF00570 HRDC domain RG42_RS24130 PF01810 LysE type translocator RG42_RS24135 PF01810 LysE type translocator RG42_RS24140 PF12146 Serine aminopeptidase, S33 RG42_RS24150 PF00892 EamA-like transporter family RG42_RS24155 PF03466 LysR substrate binding domain RG42_RS24155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG42_RS24160 PF01717 Cobalamin-independent synthase, Catalytic domain RG42_RS24160 PF08267 Cobalamin-independent synthase, N-terminal domain RG42_RS24165 PF01738 Dienelactone hydrolase family RG42_RS24170 PF01048 Phosphorylase superfamily RG42_RS24180 PF02646 RmuC family RG42_RS24185 PF01209 ubiE/COQ5 methyltransferase family RG42_RS24190 PF02036 SCP-2 sterol transfer family RG42_RS24195 PF03109 ABC1 family RG42_RS24200 PF02416 mttA/Hcf106 family RG42_RS24210 PF00902 Sec-independent protein translocase protein (TatC) RG42_RS24215 PF01026 TatD related DNase RG42_RS24220 PF02357 Transcription termination factor nusG RG42_RS24225 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase RG42_RS24230 PF00970 Oxidoreductase FAD-binding domain RG42_RS24230 PF00175 Oxidoreductase NAD-binding domain RG42_RS24240 PF02803 Thiolase, C-terminal domain RG42_RS24240 PF00108 Thiolase, N-terminal domain RG42_RS24245 PF00378 Enoyl-CoA hydratase/isomerase RG42_RS24245 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RG42_RS24245 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RG42_RS24250 PF00557 Metallopeptidase family M24 RG42_RS24255 PF01205 Uncharacterized protein family UPF0029 RG42_RS24255 PF09186 Domain of unknown function (DUF1949) RG42_RS24260 PF02386 Cation transport protein RG42_RS24265 PF12724 Flavodoxin domain RG42_RS24420 PF01055 Glycosyl hydrolases family 31 RG42_RS24565 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RG42_RS24565 PF02378 Phosphotransferase system, EIIC RG42_RS24595 PF06134 L-rhamnose isomerase (RhaA) RG42_RS24605 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RG42_RS24605 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RG42_RS24715 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RG42_RS24715 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RG42_RS24760 PF00270 DEAD/DEAH box helicase RG42_RS24760 PF18074 Primosomal protein N C-terminal domain RG42_RS24760 PF00271 Helicase conserved C-terminal domain RG42_RS24760 PF18319 PriA DNA helicase Cys-rich region (CRR) domain RG42_RS24760 PF17764 3′ DNA-binding domain (3′BD) RG42_RS24905 PF00884 Sulfatase RG42_RS24925 PF00311 Phosphoenolpyruvate carboxylase RG42_RS24950 PF01546 Peptidase family M20/M25/M40 RG42_RS24950 PF07687 Peptidase dimerisation domain RG42_RS25090 PF01263 Aldose 1-epimerase RG42_RS25365 PF00365 Phosphofructokinase RG42_RS25385 PF00175 Oxidoreductase NAD-binding domain RG42_RS25385 PF00970 Oxidoreductase FAD-binding domain RG42_RS25390 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded RG42_RS25425 PF01636 Phosphotransferase enzyme family RG42_RS25440 PF06097 Bacterial protein of unknown function (DUF945) RG42_RS25465 PF01367 5'-3' exonuclease, C-terminal SAM fold RG42_RS25465 PF01612 3'-5' exonuclease RG42_RS25465 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RG42_RS25465 PF00476 DNA polymerase family A RG42_RS25570 PF01261 Xylose isomerase-like TIM barrel RG42_RS25580 PF07690 Major Facilitator Superfamily RG42_RS25630 PF00294 pfkB family carbohydrate kinase RG42_RS25690 PF01636 Phosphotransferase enzyme family