RG42_RS00035 SM00563 Phosphate acyltransferases RG42_RS00045 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs RG42_RS00045 SM00474 3'-5' exonuclease RG42_RS00045 SM00475 5'-3' exonuclease RG42_RS00045 SM00482 DNA polymerase A domain RG42_RS00065 SM00729 Elongator protein 3, MiaB family, Radical SAM RG42_RS00075 SM00382 ATPases associated with a variety of cellular activities RG42_RS00075 SM00448 cheY-homologous receiver domain RG42_RS00080 SM00091 PAS domain RG42_RS00080 SM00387 Histidine kinase-like ATPases RG42_RS00080 SM00388 His Kinase A (phosphoacceptor) domain RG42_RS00085 SM01230 RG42_RS00085 RG42_RS00100 SM00345 helix_turn_helix gluconate operon transcriptional repressor RG42_RS00100 SM00866 RG42_RS00100 RG42_RS00145 SM01133 RG42_RS00145 RG42_RS00160 SM00420 helix_turn_helix, Deoxyribose operon repressor RG42_RS00160 SM01134 RG42_RS00160 RG42_RS00260 SM01007 Class II Aldolase and Adducin N-terminal domain RG42_RS00280 SM00342 helix_turn_helix, arabinose operon control protein RG42_RS00285 SM00342 helix_turn_helix, arabinose operon control protein RG42_RS00320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RG42_RS00320 SM00387 Histidine kinase-like ATPases RG42_RS00320 SM00388 His Kinase A (phosphoacceptor) domain RG42_RS00325 SM00448 cheY-homologous receiver domain RG42_RS00325 SM00862 Transcriptional regulatory protein, C terminal RG42_RS00420 SM00382 ATPases associated with a variety of cellular activities RG42_RS00420 SM01086 C-terminal, D2-small domain, of ClpB protein RG42_RS00435 SM00354 helix_turn _helix lactose operon repressor RG42_RS00440 SM00487 DEAD-like helicases superfamily RG42_RS00440 SM00490 helicase superfamily c-terminal domain RG42_RS00540 SM00342 helix_turn_helix, arabinose operon control protein RG42_RS00570 SM00859 Semialdehyde dehydrogenase, NAD binding domain RG42_RS00705 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. RG42_RS00705 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. RG42_RS00710 SM00649 Ribosomal protein L11/L12 RG42_RS00740 SM00663 RNA polymerase I subunit A N-terminus RG42_RS00750 SM00876 Biotin and Thiamin Synthesis associated domain RG42_RS00805 SM00411 bacterial (prokaryotic) histone like domain RG42_RS00825 SM00387 Histidine kinase-like ATPases RG42_RS00825 SM00388 His Kinase A (phosphoacceptor) domain RG42_RS00830 SM00382 ATPases associated with a variety of cellular activities RG42_RS00830 SM00448 cheY-homologous receiver domain RG42_RS00835 SM01209 RG42_RS00835 RG42_RS00835 SM01210 RG42_RS00835 RG42_RS00840 SM00798 AICARFT/IMPCHase bienzyme RG42_RS00840 SM00851 MGS-like domain RG42_RS00910 SM00248 ankyrin repeats RG42_RS00915 SM00346 helix_turn_helix isocitrate lyase regulation RG42_RS00920 SM01018 B12 binding domain RG42_RS00935 SM00363 S4 RNA-binding domain RG42_RS01020 SM00382 ATPases associated with a variety of cellular activities RG42_RS01065 SM00563 Phosphate acyltransferases RG42_RS01115 SM00829 Enoylreductase RG42_RS01120 SM00382 ATPases associated with a variety of cellular activities RG42_RS01125 SM01005 Alanine racemase, C-terminal domain RG42_RS01175 SM00052 Putative diguanylate phosphodiesterase RG42_RS01180 SM00342 helix_turn_helix, arabinose operon control protein RG42_RS01185 SM00422 helix_turn_helix, mercury resistance RG42_RS01270 SM00028 Tetratricopeptide repeats RG42_RS01285 SM00671 Sel1-like repeats. RG42_RS01315 SM00849 Metallo-beta-lactamase superfamily RG42_RS01335 SM00382 ATPases associated with a variety of cellular activities RG42_RS01375 SM00072 Guanylate kinase homologues. RG42_RS01385 SM00382 ATPases associated with a variety of cellular activities RG42_RS01395 SM00382 ATPases associated with a variety of cellular activities RG42_RS01420 SM00345 helix_turn_helix gluconate operon transcriptional repressor RG42_RS01420 SM00866 RG42_RS01420 RG42_RS01435 SM00382 ATPases associated with a variety of cellular activities RG42_RS01480 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RG42_RS01480 SM00387 Histidine kinase-like ATPases RG42_RS01480 SM00388 His Kinase A (phosphoacceptor) domain RG42_RS01485 SM00448 cheY-homologous receiver domain RG42_RS01485 SM00862 Transcriptional regulatory protein, C terminal RG42_RS01500 SM00342 helix_turn_helix, arabinose operon control protein RG42_RS01510 SM00342 helix_turn_helix, arabinose operon control protein RG42_RS01565 SM00448 cheY-homologous receiver domain RG42_RS01570 SM00091 PAS domain RG42_RS01570 SM00387 Histidine kinase-like ATPases RG42_RS01620 SM00862 Transcriptional regulatory protein, C terminal RG42_RS01675 SM00883 Chaperonin 10 Kd subunit RG42_RS01700 SM00841 Elongation factor P, C-terminal RG42_RS01700 SM01185 RG42_RS01700 RG42_RS01785 SM00479 RG42_RS01785 RG42_RS01820 SM00646 RG42_RS01820 RG42_RS01825 SM00853 MutL C terminal dimerisation domain RG42_RS01825 SM01340 RG42_RS01825 RG42_RS01845 SM00244 prohibitin homologues RG42_RS01850 SM00244 prohibitin homologues RG42_RS01860 SM00788 Adenylosuccinate synthetase RG42_RS01870 SM00316 Ribosomal protein S1-like RNA-binding domain RG42_RS01870 SM00357 Cold shock protein domain RG42_RS01870 SM00955 RG42_RS01870 RG42_RS01875 SM00967 RNA 2'-O ribose methyltransferase substrate binding RG42_RS01935 SM00420 helix_turn_helix, Deoxyribose operon repressor RG42_RS01935 SM01134 RG42_RS01935 RG42_RS01960 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family RG42_RS01970 SM01007 Class II Aldolase and Adducin N-terminal domain RG42_RS02015 SM01321 RG42_RS02015 RG42_RS02100 SM01091 Transporter associated domain RG42_RS02130 SM00966 SpoVT / AbrB like domain RG42_RS02150 SM00382 ATPases associated with a variety of cellular activities RG42_RS02205 SM00642 Alpha-amylase domain RG42_RS02215 SM00354 helix_turn _helix lactose operon repressor RG42_RS02220 SM00831 Cation transporter/ATPase, N-terminus RG42_RS02255 SM00822 RG42_RS02255 RG42_RS02330 SM00829 Enoylreductase RG42_RS02475 SM00345 helix_turn_helix gluconate operon transcriptional repressor RG42_RS02475 SM00895 RG42_RS02475 RG42_RS02600 SM00833 Cobalamin synthesis protein cobW C-terminal domain RG42_RS02615 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RG42_RS02615 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RG42_RS02615 SM00319 Homologues of the ligand binding domain of Tar RG42_RS02625 SM00345 helix_turn_helix gluconate operon transcriptional repressor RG42_RS02625 SM00895 RG42_RS02625 RG42_RS02630 SM00829 Enoylreductase RG42_RS02645 SM00382 ATPases associated with a variety of cellular activities RG42_RS02665 SM00421 helix_turn_helix, Lux Regulon RG42_RS02670 SM00421 helix_turn_helix, Lux Regulon RG42_RS02730 SM00749 bacterial OsmY and nodulation domain RG42_RS02770 SM01133 RG42_RS02770 RG42_RS02775 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain RG42_RS02790 SM00530 Helix-turn-helix XRE-family like proteins RG42_RS02805 SM00382 ATPases associated with a variety of cellular activities RG42_RS02810 SM00530 Helix-turn-helix XRE-family like proteins RG42_RS02820 SM00382 ATPases associated with a variety of cellular activities RG42_RS02845 SM00855 Phosphoglycerate mutase family RG42_RS02850 SM00342 helix_turn_helix, arabinose operon control protein RG42_RS02850 SM00871 Bacterial transcription activator, effector binding domain RG42_RS02860 SM00448 cheY-homologous receiver domain RG42_RS02860 SM00862 Transcriptional regulatory protein, C terminal RG42_RS02865 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RG42_RS02865 SM00387 Histidine kinase-like ATPases RG42_RS02865 SM00388 His Kinase A (phosphoacceptor) domain RG42_RS02875 SM00448 cheY-homologous receiver domain RG42_RS02875 SM00862 Transcriptional regulatory protein, C terminal RG42_RS02935 SM00852 Probable molybdopterin binding domain RG42_RS02960 SM00271 DnaJ molecular chaperone homology domain RG42_RS03020 SM00904 Riboflavin kinase RG42_RS03055 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain RG42_RS03060 SM00851 MGS-like domain RG42_RS03060 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RG42_RS03105 SM00893 Electron transfer flavoprotein domain RG42_RS03110 SM00893 Electron transfer flavoprotein domain RG42_RS03155 SM00650 Ribosomal RNA adenine dimethylases RG42_RS03175 SM00271 DnaJ molecular chaperone homology domain RG42_RS03200 SM00487 DEAD-like helicases superfamily RG42_RS03200 SM00490 helicase superfamily c-terminal domain RG42_RS03205 SM00486 DNA polymerase type-B family RG42_RS03210 SM01007 Class II Aldolase and Adducin N-terminal domain RG42_RS03235 SM00342 helix_turn_helix, arabinose operon control protein RG42_RS03245 SM00382 ATPases associated with a variety of cellular activities RG42_RS03285 SM01329 RG42_RS03285 RG42_RS03290 SM00917 LeuA allosteric (dimerisation) domain RG42_RS03320 SM00354 helix_turn _helix lactose operon repressor RG42_RS03395 SM00842 Cell division protein FtsA RG42_RS03400 SM00864 Tubulin/FtsZ family, GTPase domain RG42_RS03400 SM00865 Tubulin/FtsZ family, C-terminal domain RG42_RS03415 SM00957 SecA DEAD-like domain RG42_RS03415 SM00958 SecA preprotein cross-linking domain RG42_RS03440 SM01240 RG42_RS03440 RG42_RS03470 SM00644 RG42_RS03470 RG42_RS03485 SM00345 helix_turn_helix gluconate operon transcriptional repressor RG42_RS03485 SM00895 RG42_RS03485 RG42_RS03550 SM00564 beta-propeller repeat RG42_RS03560 SM00947 Carbonic anhydrase RG42_RS03565 SM00382 ATPases associated with a variety of cellular activities RG42_RS03680 SM00487 DEAD-like helicases superfamily RG42_RS03680 SM00490 helicase superfamily c-terminal domain RG42_RS03680 SM00847 Helicase associated domain (HA2) Add an annotation RG42_RS03700 SM00382 ATPases associated with a variety of cellular activities RG42_RS03745 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RG42_RS03755 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RG42_RS03780 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RG42_RS03835 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RG42_RS03845 SM00935 Outer membrane protein (OmpH-like) RG42_RS03875 SM00481 DNA polymerase alpha chain like domain RG42_RS03895 SM00977 TilS substrate C-terminal domain RG42_RS03910 SM01322 RG42_RS03910 RG42_RS03955 SM00382 ATPases associated with a variety of cellular activities RG42_RS03955 SM00930 RG42_RS03955 RG42_RS04015 SM00257 Lysin motif RG42_RS04020 SM00849 Metallo-beta-lactamase superfamily RG42_RS04035 SM00479 RG42_RS04035 RG42_RS04085 SM00382 ATPases associated with a variety of cellular activities RG42_RS04085 SM01086 C-terminal, D2-small domain, of ClpB protein RG42_RS04220 SM01321 RG42_RS04220 RG42_RS04300 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase RG42_RS04450 SM01092 CO dehydrogenase flavoprotein C-terminal domain RG42_RS04505 SM00421 helix_turn_helix, Lux Regulon RG42_RS04540 SM00634 Bacterial Ig-like domain (group 1) RG42_RS04545 SM00342 helix_turn_helix, arabinose operon control protein RG42_RS04545 SM00871 Bacterial transcription activator, effector binding domain RG42_RS04565 SM00342 helix_turn_helix, arabinose operon control protein RG42_RS04630 SM00052 Putative diguanylate phosphodiesterase RG42_RS04630 SM00421 helix_turn_helix, Lux Regulon RG42_RS04650 SM00248 ankyrin repeats RG42_RS04685 SM00829 Enoylreductase RG42_RS04710 SM00382 ATPases associated with a variety of cellular activities RG42_RS04760 SM00947 Carbonic anhydrase RG42_RS04765 SM01116 RG42_RS04765 RG42_RS04775 SM01266 RG42_RS04775 RG42_RS04785 SM01038 Beta galactosidase small chain RG42_RS04795 SM00354 helix_turn _helix lactose operon repressor RG42_RS04800 SM00346 helix_turn_helix isocitrate lyase regulation RG42_RS04825 SM00859 Semialdehyde dehydrogenase, NAD binding domain RG42_RS04860 SM00829 Enoylreductase RG42_RS04895 SM00062 Bacterial periplasmic substrate-binding proteins RG42_RS04900 SM00382 ATPases associated with a variety of cellular activities RG42_RS04915 SM01004 Delta-aminolevulinic acid dehydratase RG42_RS04925 SM00869 Autotransporter beta-domain RG42_RS04980 SM00098 Alkaline phosphatase homologues RG42_RS04990 SM00267 diguanylate cyclase RG42_RS05070 SM00448 cheY-homologous receiver domain RG42_RS05070 SM00862 Transcriptional regulatory protein, C terminal RG42_RS05075 SM00091 PAS domain RG42_RS05075 SM00387 Histidine kinase-like ATPases RG42_RS05075 SM00388 His Kinase A (phosphoacceptor) domain RG42_RS05090 SM00642 Alpha-amylase domain RG42_RS05110 SM01323 RG42_RS05110 RG42_RS05125 SM00507 HNH nucleases RG42_RS05175 SM00861 Transketolase, pyrimidine binding domain RG42_RS05190 SM00981 RG42_RS05190 RG42_RS05275 SM00382 ATPases associated with a variety of cellular activities RG42_RS05275 SM00994 ClpX C4-type zinc finger RG42_RS05275 SM01086 C-terminal, D2-small domain, of ClpB protein RG42_RS05280 SM00382 ATPases associated with a variety of cellular activities RG42_RS05280 SM00464 Found in ATP-dependent protease La (LON) RG42_RS05285 SM00411 bacterial (prokaryotic) histone like domain RG42_RS05295 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RG42_RS05320 SM00344 helix_turn_helix ASNC type RG42_RS05325 SM00382 ATPases associated with a variety of cellular activities RG42_RS05330 SM00382 ATPases associated with a variety of cellular activities RG42_RS05335 SM00938 Nitrogen regulatory protein P-II RG42_RS05370 SM00052 Putative diguanylate phosphodiesterase RG42_RS05380 SM01266 RG42_RS05380 RG42_RS05445 SM00382 ATPases associated with a variety of cellular activities RG42_RS05455 SM00493 RG42_RS05455 RG42_RS05460 SM00387 Histidine kinase-like ATPases RG42_RS05515 SM00530 Helix-turn-helix XRE-family like proteins RG42_RS05545 SM00422 helix_turn_helix, mercury resistance RG42_RS05555 SM00244 prohibitin homologues RG42_RS05560 SM00382 ATPases associated with a variety of cellular activities RG42_RS05575 SM00822 RG42_RS05575 RG42_RS05585 SM00382 ATPases associated with a variety of cellular activities RG42_RS05625 SM00450 Rhodanese Homology Domain RG42_RS05640 SM00346 helix_turn_helix isocitrate lyase regulation RG42_RS05720 SM01001 AIR carboxylase RG42_RS05740 SM00840 RG42_RS05740 RG42_RS05785 SM00421 helix_turn_helix, Lux Regulon RG42_RS05785 SM00448 cheY-homologous receiver domain RG42_RS05795 SM00342 helix_turn_helix, arabinose operon control protein RG42_RS05820 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RG42_RS05820 SM00387 Histidine kinase-like ATPases RG42_RS05820 SM00388 His Kinase A (phosphoacceptor) domain RG42_RS05825 SM00448 cheY-homologous receiver domain RG42_RS05825 SM00862 Transcriptional regulatory protein, C terminal RG42_RS05920 SM00923 MbtH-like protein RG42_RS05925 SM00823 Phosphopantetheine attachment site RG42_RS05925 SM00824 Thioesterase RG42_RS05935 SM00382 ATPases associated with a variety of cellular activities RG42_RS05980 SM00822 RG42_RS05980 RG42_RS06010 SM00470 ParB-like nuclease domain RG42_RS06105 SM00764 Citrate lyase ligase C-terminal domain RG42_RS06110 SM00091 PAS domain RG42_RS06110 SM00387 Histidine kinase-like ATPases RG42_RS06115 SM00448 cheY-homologous receiver domain RG42_RS06135 SM00357 Cold shock protein domain RG42_RS06160 SM00729 Elongator protein 3, MiaB family, Radical SAM RG42_RS06190 SM00936 Penicillin-binding protein 5, C-terminal domain RG42_RS06220 SM00855 Phosphoglycerate mutase family RG42_RS06250 SM00671 Sel1-like repeats. RG42_RS06300 SM00382 ATPases associated with a variety of cellular activities RG42_RS06315 SM00062 Bacterial periplasmic substrate-binding proteins RG42_RS06325 SM00116 Domain in cystathionine beta-synthase and other proteins. RG42_RS06325 SM01091 Transporter associated domain RG42_RS06340 SM00729 Elongator protein 3, MiaB family, Radical SAM RG42_RS06510 SM00448 cheY-homologous receiver domain RG42_RS06510 SM00862 Transcriptional regulatory protein, C terminal RG42_RS06515 SM00387 Histidine kinase-like ATPases RG42_RS06515 SM00388 His Kinase A (phosphoacceptor) domain RG42_RS06620 SM00796 Allophanate hydrolase subunit 1 RG42_RS06625 SM00797 Allophanate hydrolase subunit 2 RG42_RS06635 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain RG42_RS06635 SM01232 RG42_RS06635 RG42_RS06710 SM00861 Transketolase, pyrimidine binding domain RG42_RS06725 SM00881 CoA binding domain RG42_RS06730 SM00345 helix_turn_helix gluconate operon transcriptional repressor RG42_RS06730 SM00866 RG42_RS06730 RG42_RS06740 SM00872 Alpha mannosidase, middle domain RG42_RS06875 SM00855 Phosphoglycerate mutase family RG42_RS06900 SM00382 ATPases associated with a variety of cellular activities RG42_RS06930 SM00382 ATPases associated with a variety of cellular activities RG42_RS07140 SM00635 Bacterial Ig-like domain 2 RG42_RS07170 SM00232 JAB/MPN domain RG42_RS07180 SM00060 Fibronectin type 3 domain RG42_RS07200 SM00267 diguanylate cyclase RG42_RS07220 SM00729 Elongator protein 3, MiaB family, Radical SAM RG42_RS07220 SM00876 Biotin and Thiamin Synthesis associated domain RG42_RS07240 SM00487 DEAD-like helicases superfamily RG42_RS07240 SM00490 helicase superfamily c-terminal domain RG42_RS07250 SM00729 Elongator protein 3, MiaB family, Radical SAM RG42_RS07255 SM00852 Probable molybdopterin binding domain RG42_RS07290 SM00155 Phospholipase D. Active site motifs. RG42_RS07315 SM00382 ATPases associated with a variety of cellular activities RG42_RS07330 SM00487 DEAD-like helicases superfamily RG42_RS07330 SM00490 helicase superfamily c-terminal domain RG42_RS07345 SM00487 DEAD-like helicases superfamily RG42_RS07345 SM00488 RG42_RS07345 RG42_RS07345 SM00491 RG42_RS07345 RG42_RS07370 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. RG42_RS07400 SM00382 ATPases associated with a variety of cellular activities RG42_RS07410 SM00062 Bacterial periplasmic substrate-binding proteins RG42_RS07410 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. RG42_RS07455 SM00529 Helix-turn-helix diphteria tox regulatory element RG42_RS07470 SM00382 ATPases associated with a variety of cellular activities RG42_RS07505 SM00852 Probable molybdopterin binding domain RG42_RS07515 SM00382 ATPases associated with a variety of cellular activities RG42_RS07535 SM00052 Putative diguanylate phosphodiesterase RG42_RS07540 SM00267 diguanylate cyclase RG42_RS07545 SM00729 Elongator protein 3, MiaB family, Radical SAM RG42_RS07565 SM00936 Penicillin-binding protein 5, C-terminal domain RG42_RS07570 SM00420 helix_turn_helix, Deoxyribose operon repressor RG42_RS07570 SM01134 RG42_RS07570 RG42_RS07575 SM00014 Acid phosphatase homologues RG42_RS07800 SM00857 Resolvase, N terminal domain RG42_RS07890 SM00382 ATPases associated with a variety of cellular activities RG42_RS07920 SM00062 Bacterial periplasmic substrate-binding proteins RG42_RS07920 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. RG42_RS07935 SM00062 Bacterial periplasmic substrate-binding proteins RG42_RS07935 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. RG42_RS07940 SM00382 ATPases associated with a variety of cellular activities RG42_RS07955 SM00644 RG42_RS07955 RG42_RS08020 SM00382 ATPases associated with a variety of cellular activities RG42_RS08025 SM00357 Cold shock protein domain RG42_RS08035 SM00382 ATPases associated with a variety of cellular activities RG42_RS08035 SM01086 C-terminal, D2-small domain, of ClpB protein RG42_RS08050 SM00316 Ribosomal protein S1-like RNA-binding domain RG42_RS08065 SM00382 ATPases associated with a variety of cellular activities RG42_RS08070 SM00382 ATPases associated with a variety of cellular activities RG42_RS08085 SM00344 helix_turn_helix ASNC type RG42_RS08090 SM00843 RG42_RS08090 RG42_RS08100 SM00382 ATPases associated with a variety of cellular activities RG42_RS08110 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RG42_RS08190 SM00316 Ribosomal protein S1-like RNA-binding domain RG42_RS08195 SM00411 bacterial (prokaryotic) histone like domain RG42_RS08205 SM00382 ATPases associated with a variety of cellular activities RG42_RS08275 SM00849 Metallo-beta-lactamase superfamily RG42_RS08310 SM00382 ATPases associated with a variety of cellular activities RG42_RS08325 SM00062 Bacterial periplasmic substrate-binding proteins RG42_RS08390 SM00981 RG42_RS08390 RG42_RS08395 SM00382 ATPases associated with a variety of cellular activities RG42_RS08470 SM00851 MGS-like domain RG42_RS08485 SM00881 CoA binding domain RG42_RS08490 SM00992 Hemimethylated DNA-binding protein YccV like RG42_RS08495 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase RG42_RS08575 SM00226 Low molecular weight phosphatase family RG42_RS08605 SM00357 Cold shock protein domain RG42_RS08610 SM00357 Cold shock protein domain RG42_RS08635 SM00073 Histidine Phosphotransfer domain RG42_RS08635 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RG42_RS08635 SM00387 Histidine kinase-like ATPases RG42_RS08635 SM00388 His Kinase A (phosphoacceptor) domain RG42_RS08635 SM00448 cheY-homologous receiver domain RG42_RS08645 SM00448 cheY-homologous receiver domain RG42_RS08645 SM00862 Transcriptional regulatory protein, C terminal RG42_RS08670 SM00271 DnaJ molecular chaperone homology domain RG42_RS08715 SM00903 Flavin reductase like domain RG42_RS08815 SM00028 Tetratricopeptide repeats RG42_RS08820 SM00267 diguanylate cyclase RG42_RS08855 SM00481 DNA polymerase alpha chain like domain RG42_RS08885 SM00421 helix_turn_helix, Lux Regulon RG42_RS08920 SM00506 Appr-1"-p processing enzyme RG42_RS08925 SM00155 Phospholipase D. Active site motifs. RG42_RS08970 SM00450 Rhodanese Homology Domain RG42_RS08975 SM00867 YceI-like domain RG42_RS09060 SM00858 RG42_RS09060 RG42_RS09105 SM00047 Lysozyme subfamily 2 RG42_RS09120 SM00316 Ribosomal protein S1-like RNA-binding domain RG42_RS09130 SM00363 S4 RNA-binding domain RG42_RS09160 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. RG42_RS09165 SM00822 RG42_RS09165 RG42_RS09175 SM00825 Beta-ketoacyl synthase RG42_RS09275 SM00257 Lysin motif RG42_RS09280 SM00487 DEAD-like helicases superfamily RG42_RS09280 SM00490 helicase superfamily c-terminal domain RG42_RS09280 SM00982 RG42_RS09280 RG42_RS09280 SM01058 CarD-like/TRCF domain RG42_RS09295 SM00382 ATPases associated with a variety of cellular activities RG42_RS09340 SM00382 ATPases associated with a variety of cellular activities RG42_RS09355 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. RG42_RS09360 SM00387 Histidine kinase-like ATPases RG42_RS09365 SM00448 cheY-homologous receiver domain RG42_RS09365 SM00862 Transcriptional regulatory protein, C terminal RG42_RS09395 SM01329 RG42_RS09395 RG42_RS09435 SM00422 helix_turn_helix, mercury resistance RG42_RS09440 SM00052 Putative diguanylate phosphodiesterase RG42_RS09440 SM01034 Sensors of blue-light using FAD RG42_RS09465 SM00052 Putative diguanylate phosphodiesterase RG42_RS09595 SM00345 helix_turn_helix gluconate operon transcriptional repressor RG42_RS09610 SM01005 Alanine racemase, C-terminal domain RG42_RS09615 SM01091 Transporter associated domain RG42_RS09665 SM01120 RG42_RS09665 RG42_RS09675 SM00091 PAS domain RG42_RS09675 SM00382 ATPases associated with a variety of cellular activities RG42_RS09680 SM00869 Autotransporter beta-domain RG42_RS09715 SM01400 RG42_RS09715 RG42_RS09735 SM00937 RG42_RS09735 RG42_RS09815 SM00421 helix_turn_helix, Lux Regulon RG42_RS09815 SM00448 cheY-homologous receiver domain RG42_RS09820 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RG42_RS09820 SM00387 Histidine kinase-like ATPases RG42_RS09835 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RG42_RS09900 SM00448 cheY-homologous receiver domain RG42_RS09910 SM00528 Domain in histone-like proteins of HNS family RG42_RS09965 SM00382 ATPases associated with a variety of cellular activities RG42_RS09970 SM00382 ATPases associated with a variety of cellular activities RG42_RS09980 SM00155 Phospholipase D. Active site motifs. RG42_RS10130 SM00481 DNA polymerase alpha chain like domain RG42_RS10145 SM00363 S4 RNA-binding domain RG42_RS10155 SM00822 RG42_RS10155 RG42_RS10175 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain RG42_RS10175 SM00437 Bacterial DNA topoisomerase I DNA-binding domain RG42_RS10175 SM00493 RG42_RS10175 RG42_RS10215 SM00014 Acid phosphatase homologues RG42_RS10225 SM00028 Tetratricopeptide repeats RG42_RS10230 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family RG42_RS10245 SM00420 helix_turn_helix, Deoxyribose operon repressor RG42_RS10245 SM01134 RG42_RS10245 RG42_RS10255 SM00052 Putative diguanylate phosphodiesterase RG42_RS10255 SM00091 PAS domain RG42_RS10255 SM00267 diguanylate cyclase RG42_RS10265 SM00357 Cold shock protein domain RG42_RS10265 SM00955 RG42_RS10265 RG42_RS10290 SM00382 ATPases associated with a variety of cellular activities RG42_RS10325 SM01230 RG42_RS10325 RG42_RS10335 SM00530 Helix-turn-helix XRE-family like proteins RG42_RS10360 SM00382 ATPases associated with a variety of cellular activities RG42_RS10385 SM00450 Rhodanese Homology Domain RG42_RS10390 SM00642 Alpha-amylase domain RG42_RS10435 SM00382 ATPases associated with a variety of cellular activities RG42_RS10445 SM00354 helix_turn _helix lactose operon repressor RG42_RS10460 SM00091 PAS domain RG42_RS10460 SM00382 ATPases associated with a variety of cellular activities RG42_RS10470 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RG42_RS10520 SM00100 Cyclic nucleotide-monophosphate binding domain RG42_RS10520 SM00419 helix_turn_helix, cAMP Regulatory protein RG42_RS10560 SM00463 Small MutS-related domain RG42_RS10565 SM00091 PAS domain RG42_RS10565 SM00267 diguanylate cyclase RG42_RS10580 SM00487 DEAD-like helicases superfamily RG42_RS10580 SM00490 helicase superfamily c-terminal domain RG42_RS10695 SM00028 Tetratricopeptide repeats RG42_RS10770 SM00470 ParB-like nuclease domain RG42_RS10840 SM00857 Resolvase, N terminal domain RG42_RS10860 SM00890 Domain of unknown function RG42_RS10895 SM00342 helix_turn_helix, arabinose operon control protein RG42_RS11010 SM00195 Dual specificity phosphatase, catalytic domain RG42_RS11010 SM00404 Protein tyrosine phosphatase, catalytic domain motif RG42_RS11020 SM00382 ATPases associated with a variety of cellular activities RG42_RS11020 SM00487 DEAD-like helicases superfamily RG42_RS11020 SM00490 helicase superfamily c-terminal domain RG42_RS11020 SM00847 Helicase associated domain (HA2) Add an annotation RG42_RS11045 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RG42_RS11070 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RG42_RS11070 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RG42_RS11070 SM00319 Homologues of the ligand binding domain of Tar RG42_RS11080 SM01150 RG42_RS11080 RG42_RS11145 SM00530 Helix-turn-helix XRE-family like proteins RG42_RS11165 SM00530 Helix-turn-helix XRE-family like proteins RG42_RS11170 SM00345 helix_turn_helix gluconate operon transcriptional repressor RG42_RS11180 SM00382 ATPases associated with a variety of cellular activities RG42_RS11235 SM00829 Enoylreductase RG42_RS11240 SM00345 helix_turn_helix gluconate operon transcriptional repressor RG42_RS11240 SM00895 RG42_RS11240 RG42_RS11320 SM00903 Flavin reductase like domain RG42_RS11350 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RG42_RS11380 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RG42_RS11405 SM00530 Helix-turn-helix XRE-family like proteins RG42_RS11410 SM00829 Enoylreductase RG42_RS11415 SM00919 Malic enzyme, NAD binding domain RG42_RS11415 SM01274 RG42_RS11415 RG42_RS11440 SM00382 ATPases associated with a variety of cellular activities RG42_RS11445 SM00382 ATPases associated with a variety of cellular activities RG42_RS11470 SM00052 Putative diguanylate phosphodiesterase RG42_RS11470 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RG42_RS11470 SM00091 PAS domain RG42_RS11470 SM00267 diguanylate cyclase RG42_RS11475 SM00267 diguanylate cyclase RG42_RS11515 SM00382 ATPases associated with a variety of cellular activities RG42_RS11530 SM00342 helix_turn_helix, arabinose operon control protein RG42_RS11580 SM00530 Helix-turn-helix XRE-family like proteins RG42_RS11585 SM00869 Autotransporter beta-domain RG42_RS11605 SM00382 ATPases associated with a variety of cellular activities RG42_RS11625 SM01133 RG42_RS11625 RG42_RS11660 SM00267 diguanylate cyclase RG42_RS11705 SM00347 helix_turn_helix multiple antibiotic resistance protein RG42_RS11710 SM00342 helix_turn_helix, arabinose operon control protein RG42_RS11735 SM00267 diguanylate cyclase RG42_RS11765 SM00345 helix_turn_helix gluconate operon transcriptional repressor RG42_RS11765 SM00895 RG42_RS11765 RG42_RS11790 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RG42_RS11820 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RG42_RS11920 SM01002 Alanine dehydrogenase/PNT, C-terminal domain RG42_RS11920 SM01003 Alanine dehydrogenase/PNT, N-terminal domain RG42_RS11950 SM00448 cheY-homologous receiver domain RG42_RS11950 SM00862 Transcriptional regulatory protein, C terminal RG42_RS11955 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RG42_RS11955 SM00387 Histidine kinase-like ATPases RG42_RS11955 SM00388 His Kinase A (phosphoacceptor) domain RG42_RS12010 SM00354 helix_turn _helix lactose operon repressor RG42_RS12075 SM00900 RG42_RS12075 RG42_RS12085 SM00478 endonuclease III RG42_RS12085 SM00525 RG42_RS12085 RG42_RS12110 SM00363 S4 RNA-binding domain RG42_RS12135 SM00347 helix_turn_helix multiple antibiotic resistance protein RG42_RS12185 SM00479 RG42_RS12185 RG42_RS12190 SM00382 ATPases associated with a variety of cellular activities RG42_RS12190 SM00487 DEAD-like helicases superfamily RG42_RS12190 SM00490 helicase superfamily c-terminal domain RG42_RS12225 SM00354 helix_turn _helix lactose operon repressor RG42_RS12300 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain RG42_RS12325 SM00257 Lysin motif RG42_RS12345 SM00382 ATPases associated with a variety of cellular activities RG42_RS12415 SM00882 Coenzyme A transferase RG42_RS12430 SM00342 helix_turn_helix, arabinose operon control protein RG42_RS12440 SM00893 Electron transfer flavoprotein domain RG42_RS12445 SM00893 Electron transfer flavoprotein domain RG42_RS12500 SM00382 ATPases associated with a variety of cellular activities RG42_RS12515 SM00411 bacterial (prokaryotic) histone like domain RG42_RS12520 SM00873 B3/4 domain RG42_RS12520 SM00874 tRNA synthetase B5 domain RG42_RS12520 SM00896 Ferredoxin-fold anticodon binding domain RG42_RS12555 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain RG42_RS12630 SM01060 RG42_RS12630 RG42_RS12650 SM00342 helix_turn_helix, arabinose operon control protein RG42_RS12685 SM00465 GIY-YIG type nucleases (URI domain) RG42_RS12765 SM00382 ATPases associated with a variety of cellular activities RG42_RS12770 SM00450 Rhodanese Homology Domain RG42_RS12790 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RG42_RS12810 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain RG42_RS12810 SM00437 Bacterial DNA topoisomerase I DNA-binding domain RG42_RS12810 SM00493 RG42_RS12810 RG42_RS12835 SM00870 RG42_RS12835 RG42_RS12850 SM00420 helix_turn_helix, Deoxyribose operon repressor RG42_RS12850 SM01134 RG42_RS12850 RG42_RS12870 SM00829 Enoylreductase RG42_RS12895 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RG42_RS12915 SM00763 PrkA AAA domain RG42_RS12925 SM00267 diguanylate cyclase RG42_RS12935 SM00267 diguanylate cyclase RG42_RS12955 SM00342 helix_turn_helix, arabinose operon control protein RG42_RS12975 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RG42_RS12975 SM00267 diguanylate cyclase RG42_RS13015 SM01329 RG42_RS13015 RG42_RS13035 SM00341 Helicase and RNase D C-terminal RG42_RS13035 SM00474 3'-5' exonuclease RG42_RS13055 SM00487 DEAD-like helicases superfamily RG42_RS13055 SM00491 RG42_RS13055 RG42_RS13090 SM00052 Putative diguanylate phosphodiesterase RG42_RS13095 SM01091 Transporter associated domain RG42_RS13145 SM00357 Cold shock protein domain RG42_RS13175 SM00346 helix_turn_helix isocitrate lyase regulation RG42_RS13190 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RG42_RS13190 SM00245 tail specific protease RG42_RS13195 SM00945 ProQ/FINO family RG42_RS13200 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RG42_RS13265 SM00479 RG42_RS13265 RG42_RS13350 SM00257 Lysin motif RG42_RS13360 SM00382 ATPases associated with a variety of cellular activities RG42_RS13370 SM00382 ATPases associated with a variety of cellular activities RG42_RS13375 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RG42_RS13460 SM00836 DALR anticodon binding domain RG42_RS13460 SM01016 Arginyl tRNA synthetase N terminal dom RG42_RS13490 SM00448 cheY-homologous receiver domain RG42_RS13495 SM00448 cheY-homologous receiver domain RG42_RS13500 SM00138 Methyltransferase, chemotaxis proteins RG42_RS13505 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RG42_RS13505 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RG42_RS13505 SM00319 Homologues of the ligand binding domain of Tar RG42_RS13510 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RG42_RS13510 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RG42_RS13510 SM00319 Homologues of the ligand binding domain of Tar RG42_RS13515 SM00260 Two component signalling adaptor domain RG42_RS13520 SM00073 Histidine Phosphotransfer domain RG42_RS13520 SM00260 Two component signalling adaptor domain RG42_RS13520 SM00387 Histidine kinase-like ATPases RG42_RS13520 SM01231 RG42_RS13520 RG42_RS13570 SM00382 ATPases associated with a variety of cellular activities RG42_RS13645 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RG42_RS13645 SM00465 GIY-YIG type nucleases (URI domain) RG42_RS13650 SM00421 helix_turn_helix, Lux Regulon RG42_RS13650 SM00448 cheY-homologous receiver domain RG42_RS13665 SM00421 helix_turn_helix, Lux Regulon RG42_RS13670 SM00382 ATPases associated with a variety of cellular activities RG42_RS13685 SM00062 Bacterial periplasmic substrate-binding proteins RG42_RS13685 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. RG42_RS13730 SM00642 Alpha-amylase domain RG42_RS13785 SM00382 ATPases associated with a variety of cellular activities RG42_RS13835 SM00421 helix_turn_helix, Lux Regulon RG42_RS13860 SM00267 diguanylate cyclase RG42_RS13895 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RG42_RS13925 SM00387 Histidine kinase-like ATPases RG42_RS13925 SM00388 His Kinase A (phosphoacceptor) domain RG42_RS13930 SM00448 cheY-homologous receiver domain RG42_RS13930 SM00862 Transcriptional regulatory protein, C terminal RG42_RS13935 SM00095 Transthyretin RG42_RS14165 SM00342 helix_turn_helix, arabinose operon control protein RG42_RS14175 SM00877 RG42_RS14175 RG42_RS14180 SM00877 RG42_RS14180 RG42_RS14210 SM00877 RG42_RS14210 RG42_RS14215 SM00877 RG42_RS14215 RG42_RS14255 SM00877 RG42_RS14255 RG42_RS14260 SM00877 RG42_RS14260 RG42_RS14280 SM00871 Bacterial transcription activator, effector binding domain RG42_RS14285 SM00936 Penicillin-binding protein 5, C-terminal domain RG42_RS14370 SM00479 RG42_RS14370 RG42_RS14470 SM00984 UDP binding domain RG42_RS14475 SM01350 RG42_RS14475 RG42_RS14630 SM00226 Low molecular weight phosphatase family RG42_RS14640 SM01091 Transporter associated domain RG42_RS14665 SM00052 Putative diguanylate phosphodiesterase RG42_RS14665 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RG42_RS14665 SM00091 PAS domain RG42_RS14665 SM00267 diguanylate cyclase RG42_RS14670 SM00478 endonuclease III RG42_RS14670 SM01009 AlkA N-terminal domain RG42_RS14695 SM00327 von Willebrand factor (vWF) type A domain RG42_RS14730 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RG42_RS14730 SM00387 Histidine kinase-like ATPases RG42_RS14730 SM00388 His Kinase A (phosphoacceptor) domain RG42_RS14735 SM00448 cheY-homologous receiver domain RG42_RS14735 SM00862 Transcriptional regulatory protein, C terminal RG42_RS14765 SM00046 Diacylglycerol kinase catalytic domain (presumed) RG42_RS14795 SM00354 helix_turn _helix lactose operon repressor RG42_RS14815 SM01133 RG42_RS14815 RG42_RS14835 SM00345 helix_turn_helix gluconate operon transcriptional repressor RG42_RS14835 SM00866 RG42_RS14835 RG42_RS14840 SM00641 Glycosyl hydrolases family 25 RG42_RS14925 SM00382 ATPases associated with a variety of cellular activities RG42_RS14935 SM00327 von Willebrand factor (vWF) type A domain RG42_RS14955 SM00448 cheY-homologous receiver domain RG42_RS14955 SM00850 LytTr DNA-binding domain RG42_RS14960 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RG42_RS14965 SM00422 helix_turn_helix, mercury resistance RG42_RS14980 SM00382 ATPases associated with a variety of cellular activities RG42_RS14995 SM01217 RG42_RS14995 RG42_RS15090 SM00382 ATPases associated with a variety of cellular activities RG42_RS15100 SM00354 helix_turn _helix lactose operon repressor RG42_RS15155 SM00518 AP endonuclease family 2 RG42_RS15220 SM00841 Elongation factor P, C-terminal RG42_RS15220 SM01185 RG42_RS15220 RG42_RS15230 SM00833 Cobalamin synthesis protein cobW C-terminal domain RG42_RS15235 SM00014 Acid phosphatase homologues RG42_RS15245 SM00052 Putative diguanylate phosphodiesterase RG42_RS15265 SM00382 ATPases associated with a variety of cellular activities RG42_RS15285 SM00363 S4 RNA-binding domain RG42_RS15295 SM00487 DEAD-like helicases superfamily RG42_RS15295 SM00490 helicase superfamily c-terminal domain RG42_RS15330 SM00869 Autotransporter beta-domain RG42_RS15340 SM00421 helix_turn_helix, Lux Regulon RG42_RS15340 SM00448 cheY-homologous receiver domain RG42_RS15380 SM00382 ATPases associated with a variety of cellular activities RG42_RS15405 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RG42_RS15435 SM00382 ATPases associated with a variety of cellular activities RG42_RS15445 SM00342 helix_turn_helix, arabinose operon control protein RG42_RS15470 SM00387 Histidine kinase-like ATPases RG42_RS15475 SM00421 helix_turn_helix, Lux Regulon RG42_RS15475 SM00448 cheY-homologous receiver domain RG42_RS15485 SM00387 Histidine kinase-like ATPases RG42_RS15485 SM00388 His Kinase A (phosphoacceptor) domain RG42_RS15485 SM00448 cheY-homologous receiver domain RG42_RS15490 SM00091 PAS domain RG42_RS15490 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RG42_RS15490 SM00387 Histidine kinase-like ATPases RG42_RS15490 SM00388 His Kinase A (phosphoacceptor) domain RG42_RS15495 SM00382 ATPases associated with a variety of cellular activities RG42_RS15495 SM00448 cheY-homologous receiver domain RG42_RS15500 SM00882 Coenzyme A transferase RG42_RS15505 SM00882 Coenzyme A transferase RG42_RS15530 SM01359 RG42_RS15530 RG42_RS15530 SM01360 RG42_RS15530 RG42_RS15545 SM00434 DNA Topoisomerase IV RG42_RS15555 SM00869 Autotransporter beta-domain RG42_RS15660 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RG42_RS15665 SM00346 helix_turn_helix isocitrate lyase regulation RG42_RS15670 SM00852 Probable molybdopterin binding domain RG42_RS15735 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RG42_RS15770 SM00849 Metallo-beta-lactamase superfamily RG42_RS15780 SM00327 von Willebrand factor (vWF) type A domain RG42_RS15850 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RG42_RS15850 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RG42_RS15855 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RG42_RS15895 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RG42_RS15960 SM00905 Dihydroneopterin aldolase RG42_RS15975 SM00382 ATPases associated with a variety of cellular activities RG42_RS15990 SM00062 Bacterial periplasmic substrate-binding proteins RG42_RS15995 SM00062 Bacterial periplasmic substrate-binding proteins RG42_RS16040 SM00859 Semialdehyde dehydrogenase, NAD binding domain RG42_RS16065 SM00825 Beta-ketoacyl synthase RG42_RS16105 SM00463 Small MutS-related domain RG42_RS16225 SM00421 helix_turn_helix, Lux Regulon RG42_RS16225 SM00448 cheY-homologous receiver domain RG42_RS16230 SM00062 Bacterial periplasmic substrate-binding proteins RG42_RS16230 SM00073 Histidine Phosphotransfer domain RG42_RS16230 SM00387 Histidine kinase-like ATPases RG42_RS16230 SM00388 His Kinase A (phosphoacceptor) domain RG42_RS16230 SM00448 cheY-homologous receiver domain RG42_RS16290 SM00387 Histidine kinase-like ATPases RG42_RS16295 SM00448 cheY-homologous receiver domain RG42_RS16295 SM00850 LytTr DNA-binding domain RG42_RS16300 SM00342 helix_turn_helix, arabinose operon control protein RG42_RS16360 SM00052 Putative diguanylate phosphodiesterase RG42_RS16360 SM00267 diguanylate cyclase RG42_RS16455 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RG42_RS16455 SM00292 breast cancer carboxy-terminal domain RG42_RS16455 SM00532 Ligase N family RG42_RS16460 SM00771 ZipA, C-terminal domain (FtsZ-binding) RG42_RS16505 SM00773 Proposed nucleic acid binding domain RG42_RS16515 SM00382 ATPases associated with a variety of cellular activities RG42_RS16535 SM00822 RG42_RS16535 RG42_RS16580 SM00646 RG42_RS16580 RG42_RS16590 SM00342 helix_turn_helix, arabinose operon control protein RG42_RS16595 SM00877 RG42_RS16595 RG42_RS16600 SM00877 RG42_RS16600 RG42_RS16645 SM00877 RG42_RS16645 RG42_RS16670 SM00877 RG42_RS16670 RG42_RS16675 SM00919 Malic enzyme, NAD binding domain RG42_RS16675 SM01274 RG42_RS16675 RG42_RS16685 SM00861 Transketolase, pyrimidine binding domain RG42_RS16705 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RG42_RS16705 SM00387 Histidine kinase-like ATPases RG42_RS16765 SM01130 RG42_RS16765 RG42_RS16830 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RG42_RS16830 SM00382 ATPases associated with a variety of cellular activities RG42_RS16895 SM00052 Putative diguanylate phosphodiesterase RG42_RS16895 SM00267 diguanylate cyclase RG42_RS16930 SM00116 Domain in cystathionine beta-synthase and other proteins. RG42_RS16930 SM01240 RG42_RS16930 RG42_RS16950 SM00564 beta-propeller repeat RG42_RS16970 SM00530 Helix-turn-helix XRE-family like proteins RG42_RS16980 SM00562 RG42_RS16980 RG42_RS16990 SM01359 RG42_RS16990 RG42_RS16990 SM01360 RG42_RS16990 RG42_RS16995 SM00450 Rhodanese Homology Domain RG42_RS17025 SM00271 DnaJ molecular chaperone homology domain RG42_RS17115 SM00829 Enoylreductase RG42_RS17125 SM00382 ATPases associated with a variety of cellular activities RG42_RS17135 SM00028 Tetratricopeptide repeats RG42_RS17160 SM00938 Nitrogen regulatory protein P-II RG42_RS17165 SM00382 ATPases associated with a variety of cellular activities RG42_RS17165 SM00448 cheY-homologous receiver domain RG42_RS17175 SM00387 Histidine kinase-like ATPases RG42_RS17175 SM00388 His Kinase A (phosphoacceptor) domain RG42_RS17180 SM01211 RG42_RS17180 RG42_RS17190 SM00062 Bacterial periplasmic substrate-binding proteins RG42_RS17250 SM00358 Double-stranded RNA binding motif RG42_RS17250 SM00535 Ribonuclease III family RG42_RS17305 SM00487 DEAD-like helicases superfamily RG42_RS17305 SM00490 helicase superfamily c-terminal domain RG42_RS17325 SM00986 Uracil DNA glycosylase superfamily RG42_RS17325 SM00987 UreE urease accessory protein, C-terminal domain RG42_RS17330 SM00967 RNA 2'-O ribose methyltransferase substrate binding RG42_RS17340 SM01144 RG42_RS17340 RG42_RS17345 SM00881 CoA binding domain RG42_RS17350 SM00155 Phospholipase D. Active site motifs. RG42_RS17395 SM00382 ATPases associated with a variety of cellular activities RG42_RS17395 SM01086 C-terminal, D2-small domain, of ClpB protein RG42_RS17405 SM00363 S4 RNA-binding domain RG42_RS17425 SM00830 Chorismate mutase type II RG42_RS17430 SM00830 Chorismate mutase type II RG42_RS17450 SM00267 diguanylate cyclase RG42_RS17480 SM00382 ATPases associated with a variety of cellular activities RG42_RS17480 SM00962 SRP54-type protein, GTPase domain RG42_RS17480 SM00963 SRP54-type protein, helical bundle domain RG42_RS17490 SM01091 Transporter associated domain RG42_RS17540 SM00869 Autotransporter beta-domain RG42_RS17620 SM00345 helix_turn_helix gluconate operon transcriptional repressor RG42_RS17620 SM00895 RG42_RS17620 RG42_RS17625 SM00257 Lysin motif RG42_RS17625 SM00749 bacterial OsmY and nodulation domain RG42_RS17635 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RG42_RS17640 SM00450 Rhodanese Homology Domain RG42_RS17645 SM00528 Domain in histone-like proteins of HNS family RG42_RS17690 SM00382 ATPases associated with a variety of cellular activities RG42_RS17720 SM00347 helix_turn_helix multiple antibiotic resistance protein RG42_RS17785 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain RG42_RS17800 SM00382 ATPases associated with a variety of cellular activities RG42_RS17840 SM00420 helix_turn_helix, Deoxyribose operon repressor RG42_RS17840 SM01134 RG42_RS17840 RG42_RS17850 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RG42_RS17850 SM00382 ATPases associated with a variety of cellular activities RG42_RS17855 SM00849 Metallo-beta-lactamase superfamily RG42_RS17880 SM00354 helix_turn _helix lactose operon repressor RG42_RS17970 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RG42_RS17970 SM00382 ATPases associated with a variety of cellular activities RG42_RS17980 SM00533 DNA-binding domain of DNA mismatch repair MUTS family RG42_RS17980 SM00534 ATPase domain of DNA mismatch repair MUTS family RG42_RS17990 SM00420 helix_turn_helix, Deoxyribose operon repressor RG42_RS17990 SM01134 RG42_RS17990 RG42_RS18005 SM01007 Class II Aldolase and Adducin N-terminal domain RG42_RS18025 SM00257 Lysin motif RG42_RS18095 SM01101 RG42_RS18095 RG42_RS18220 SM01192 RG42_RS18220 RG42_RS18220 SM01193 RG42_RS18220 RG42_RS18240 SM00966 SpoVT / AbrB like domain RG42_RS18245 SM00954 Region found in RelA / SpoT proteins RG42_RS18255 SM00073 Histidine Phosphotransfer domain RG42_RS18255 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RG42_RS18255 SM00387 Histidine kinase-like ATPases RG42_RS18255 SM00388 His Kinase A (phosphoacceptor) domain RG42_RS18255 SM00448 cheY-homologous receiver domain RG42_RS18260 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RG42_RS18265 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RG42_RS18320 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs RG42_RS18320 SM00475 5'-3' exonuclease RG42_RS18330 SM01007 Class II Aldolase and Adducin N-terminal domain RG42_RS18355 SM00420 helix_turn_helix, Deoxyribose operon repressor RG42_RS18355 SM01134 RG42_RS18355 RG42_RS18395 SM00925 MltA specific insert domain RG42_RS18420 SM00646 RG42_RS18420 RG42_RS18430 SM00382 ATPases associated with a variety of cellular activities RG42_RS18480 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RG42_RS18500 SM00927 DNA mismatch repair enzyme MutH RG42_RS18525 SM00563 Phosphate acyltransferases RG42_RS18535 SM00354 helix_turn _helix lactose operon repressor RG42_RS18585 SM00862 Transcriptional regulatory protein, C terminal RG42_RS18620 SM00028 Tetratricopeptide repeats RG42_RS18620 SM00862 Transcriptional regulatory protein, C terminal RG42_RS18635 SM00421 helix_turn_helix, Lux Regulon RG42_RS18685 SM00421 helix_turn_helix, Lux Regulon RG42_RS18765 SM00257 Lysin motif RG42_RS18775 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RG42_RS18780 SM01092 CO dehydrogenase flavoprotein C-terminal domain RG42_RS18790 SM00091 PAS domain RG42_RS18790 SM00382 ATPases associated with a variety of cellular activities RG42_RS18850 SM01092 CO dehydrogenase flavoprotein C-terminal domain RG42_RS18855 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RG42_RS18955 SM01022 RG42_RS18955 RG42_RS18995 SM01011 Aminopeptidase P, N-terminal domain RG42_RS19105 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RG42_RS19145 SM00861 Transketolase, pyrimidine binding domain RG42_RS19195 SM00731 SprT homologues. RG42_RS19220 SM00732 Likely ribonuclease with RNase H fold. RG42_RS19225 SM00382 ATPases associated with a variety of cellular activities RG42_RS19240 SM01152 RG42_RS19240 RG42_RS19250 SM00729 Elongator protein 3, MiaB family, Radical SAM RG42_RS19260 SM00870 RG42_RS19260 RG42_RS19285 SM00478 endonuclease III RG42_RS19285 SM00525 RG42_RS19285 RG42_RS19365 SM00382 ATPases associated with a variety of cellular activities RG42_RS19395 SM01276 RG42_RS19395 RG42_RS19440 SM00345 helix_turn_helix gluconate operon transcriptional repressor RG42_RS19440 SM00895 RG42_RS19440 RG42_RS19630 SM00342 helix_turn_helix, arabinose operon control protein RG42_RS19660 SM00729 Elongator protein 3, MiaB family, Radical SAM RG42_RS19670 SM00563 Phosphate acyltransferases RG42_RS19680 SM00434 DNA Topoisomerase IV RG42_RS19690 SM00530 Helix-turn-helix XRE-family like proteins RG42_RS19700 SM00871 Bacterial transcription activator, effector binding domain RG42_RS19710 SM00448 cheY-homologous receiver domain RG42_RS19710 SM00862 Transcriptional regulatory protein, C terminal RG42_RS19715 SM00387 Histidine kinase-like ATPases RG42_RS19715 SM00388 His Kinase A (phosphoacceptor) domain RG42_RS19735 SM00387 Histidine kinase-like ATPases RG42_RS19735 SM00433 TopoisomeraseII RG42_RS19835 SM00244 prohibitin homologues RG42_RS19860 SM01118 RG42_RS19860 RG42_RS19870 SM00287 Bacterial SH3 domain homologues RG42_RS19885 SM00905 Dihydroneopterin aldolase RG42_RS19890 SM01207 RG42_RS19890 RG42_RS19935 SM00400 zinc finger RG42_RS19935 SM00493 RG42_RS19935 RG42_RS19935 SM00766 DNA primase DnaG DnaB-binding RG42_RS19975 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RG42_RS19975 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RG42_RS20000 SM00354 helix_turn _helix lactose operon repressor RG42_RS20005 SM01038 Beta galactosidase small chain RG42_RS20035 SM00530 Helix-turn-helix XRE-family like proteins RG42_RS20085 SM00858 RG42_RS20085 RG42_RS20100 SM00345 helix_turn_helix gluconate operon transcriptional repressor RG42_RS20100 SM00895 RG42_RS20100 RG42_RS20260 SM00858 RG42_RS20260 RG42_RS20275 SM00420 helix_turn_helix, Deoxyribose operon repressor RG42_RS20275 SM01134 RG42_RS20275 RG42_RS20385 SM00749 bacterial OsmY and nodulation domain RG42_RS20395 SM00859 Semialdehyde dehydrogenase, NAD binding domain RG42_RS20410 SM00465 GIY-YIG type nucleases (URI domain) RG42_RS20450 SM00487 DEAD-like helicases superfamily RG42_RS20450 SM00490 helicase superfamily c-terminal domain RG42_RS20460 SM00028 Tetratricopeptide repeats RG42_RS20465 SM00316 Ribosomal protein S1-like RNA-binding domain RG42_RS20465 SM00322 K homology RNA-binding domain RG42_RS20470 SM01387 RG42_RS20470 RG42_RS20490 SM00316 Ribosomal protein S1-like RNA-binding domain RG42_RS20540 SM00382 ATPases associated with a variety of cellular activities RG42_RS20550 SM01103 RG42_RS20550 RG42_RS20625 SM00382 ATPases associated with a variety of cellular activities RG42_RS20655 SM00382 ATPases associated with a variety of cellular activities RG42_RS20700 SM00073 Histidine Phosphotransfer domain RG42_RS20700 SM00091 PAS domain RG42_RS20700 SM00387 Histidine kinase-like ATPases RG42_RS20700 SM00388 His Kinase A (phosphoacceptor) domain RG42_RS20700 SM00448 cheY-homologous receiver domain RG42_RS20705 SM00729 Elongator protein 3, MiaB family, Radical SAM RG42_RS20790 SM01130 RG42_RS20790 RG42_RS20795 SM00345 helix_turn_helix gluconate operon transcriptional repressor RG42_RS20795 SM00895 RG42_RS20795 RG42_RS20840 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RG42_RS20845 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RG42_RS20905 SM00316 Ribosomal protein S1-like RNA-binding domain RG42_RS20940 SM00052 Putative diguanylate phosphodiesterase RG42_RS20940 SM00267 diguanylate cyclase RG42_RS20945 SM00829 Enoylreductase RG42_RS20965 SM00878 Biotin carboxylase C-terminal domain RG42_RS21040 SM00062 Bacterial periplasmic substrate-binding proteins RG42_RS21055 SM00382 ATPases associated with a variety of cellular activities RG42_RS21160 SM00422 helix_turn_helix, mercury resistance RG42_RS21175 SM00662 RNA polymerases D RG42_RS21180 SM00363 S4 RNA-binding domain RG42_RS21180 SM01390 RG42_RS21180 RG42_RS21245 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. RG42_RS21250 SM01374 RG42_RS21250 RG42_RS21270 SM00322 K homology RNA-binding domain RG42_RS21285 SM01382 RG42_RS21285 RG42_RS21285 SM01383 RG42_RS21285 RG42_RS21305 SM01403 RG42_RS21305 RG42_RS21330 SM00382 ATPases associated with a variety of cellular activities RG42_RS21415 SM00495 Chitin-binding domain type 3 RG42_RS21425 SM00838 Elongation factor G C-terminus RG42_RS21425 SM00889 Elongation factor G, domain IV RG42_RS21495 SM00382 ATPases associated with a variety of cellular activities RG42_RS21525 SM00100 Cyclic nucleotide-monophosphate binding domain RG42_RS21525 SM00419 helix_turn_helix, cAMP Regulatory protein RG42_RS21615 SM00345 helix_turn_helix gluconate operon transcriptional repressor RG42_RS21615 SM00866 RG42_RS21615 RG42_RS21700 SM00965 Secretin and TonB N terminus short domain RG42_RS21745 SM00363 S4 RNA-binding domain RG42_RS21770 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RG42_RS21770 SM00387 Histidine kinase-like ATPases RG42_RS21770 SM00388 His Kinase A (phosphoacceptor) domain RG42_RS21775 SM00448 cheY-homologous receiver domain RG42_RS21775 SM00862 Transcriptional regulatory protein, C terminal RG42_RS21790 SM00316 Ribosomal protein S1-like RNA-binding domain RG42_RS21790 SM00732 Likely ribonuclease with RNase H fold. RG42_RS21800 SM00899 RG42_RS21800 RG42_RS21855 SM00421 helix_turn_helix, Lux Regulon RG42_RS21870 SM00382 ATPases associated with a variety of cellular activities RG42_RS21875 SM00420 helix_turn_helix, Deoxyribose operon repressor RG42_RS21875 SM01134 RG42_RS21875 RG42_RS21885 SM00450 Rhodanese Homology Domain RG42_RS21915 SM00642 Alpha-amylase domain RG42_RS21920 SM00642 Alpha-amylase domain RG42_RS21925 SM00859 Semialdehyde dehydrogenase, NAD binding domain RG42_RS21945 SM00354 helix_turn _helix lactose operon repressor RG42_RS22000 SM00382 ATPases associated with a variety of cellular activities RG42_RS22020 SM00382 ATPases associated with a variety of cellular activities RG42_RS22025 SM00382 ATPases associated with a variety of cellular activities RG42_RS22070 SM00382 ATPases associated with a variety of cellular activities RG42_RS22075 SM00382 ATPases associated with a variety of cellular activities RG42_RS22075 SM00962 SRP54-type protein, GTPase domain RG42_RS22075 SM00963 SRP54-type protein, helical bundle domain RG42_RS22150 SM00382 ATPases associated with a variety of cellular activities RG42_RS22155 SM00382 ATPases associated with a variety of cellular activities RG42_RS22195 SM00382 ATPases associated with a variety of cellular activities RG42_RS22300 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RG42_RS22330 SM00421 helix_turn_helix, Lux Regulon RG42_RS22380 SM00342 helix_turn_helix, arabinose operon control protein RG42_RS22385 SM00342 helix_turn_helix, arabinose operon control protein RG42_RS22395 SM01235 RG42_RS22395 RG42_RS22405 SM00421 helix_turn_helix, Lux Regulon RG42_RS22430 SM00052 Putative diguanylate phosphodiesterase RG42_RS22465 SM00052 Putative diguanylate phosphodiesterase RG42_RS22465 SM00267 diguanylate cyclase RG42_RS22470 SM00028 Tetratricopeptide repeats RG42_RS22535 SM00382 ATPases associated with a variety of cellular activities RG42_RS22540 SM00382 ATPases associated with a variety of cellular activities RG42_RS22630 SM00530 Helix-turn-helix XRE-family like proteins RG42_RS22635 SM00357 Cold shock protein domain RG42_RS22700 SM00382 ATPases associated with a variety of cellular activities RG42_RS22710 SM00342 helix_turn_helix, arabinose operon control protein RG42_RS22715 SM00047 Lysozyme subfamily 2 RG42_RS22720 SM00642 Alpha-amylase domain RG42_RS22735 SM00346 helix_turn_helix isocitrate lyase regulation RG42_RS22770 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family RG42_RS22780 SM01007 Class II Aldolase and Adducin N-terminal domain RG42_RS22920 SM00345 helix_turn_helix gluconate operon transcriptional repressor RG42_RS22920 SM00895 RG42_RS22920 RG42_RS22935 SM00971 Serine acetyltransferase, N-terminal RG42_RS22955 SM00450 Rhodanese Homology Domain RG42_RS22985 SM00829 Enoylreductase RG42_RS23075 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain RG42_RS23075 SM01232 RG42_RS23075 RG42_RS23140 SM00532 Ligase N family RG42_RS23145 SM00072 Guanylate kinase homologues. RG42_RS23150 SM01409 RG42_RS23150 RG42_RS23155 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RG42_RS23155 SM00954 Region found in RelA / SpoT proteins RG42_RS23165 SM00487 DEAD-like helicases superfamily RG42_RS23165 SM00490 helicase superfamily c-terminal domain RG42_RS23270 SM00387 Histidine kinase-like ATPases RG42_RS23275 SM00421 helix_turn_helix, Lux Regulon RG42_RS23275 SM00448 cheY-homologous receiver domain RG42_RS23355 SM00342 helix_turn_helix, arabinose operon control protein RG42_RS23375 SM00345 helix_turn_helix gluconate operon transcriptional repressor RG42_RS23375 SM00866 RG42_RS23375 RG42_RS23415 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RG42_RS23430 SM00345 helix_turn_helix gluconate operon transcriptional repressor RG42_RS23430 SM00895 RG42_RS23430 RG42_RS23450 SM00387 Histidine kinase-like ATPases RG42_RS23450 SM00433 TopoisomeraseII RG42_RS23460 SM00480 DNA polymerase III beta subunit RG42_RS23465 SM00382 ATPases associated with a variety of cellular activities RG42_RS23465 SM00760 Bacterial dnaA protein helix-turn-helix domain RG42_RS23485 SM01234 RG42_RS23485 RG42_RS23605 SM01061 CAT RNA binding domain RG42_RS23615 SM00382 ATPases associated with a variety of cellular activities RG42_RS23650 SM00382 ATPases associated with a variety of cellular activities RG42_RS23695 SM01228 RG42_RS23695 RG42_RS23705 SM00344 helix_turn_helix ASNC type RG42_RS23715 SM00327 von Willebrand factor (vWF) type A domain RG42_RS23720 SM00382 ATPases associated with a variety of cellular activities RG42_RS23735 SM00382 ATPases associated with a variety of cellular activities RG42_RS23755 SM00354 helix_turn _helix lactose operon repressor RG42_RS23765 SM00345 helix_turn_helix gluconate operon transcriptional repressor RG42_RS23765 SM00895 RG42_RS23765 RG42_RS23815 SM00382 ATPases associated with a variety of cellular activities RG42_RS23890 SM00487 DEAD-like helicases superfamily RG42_RS23890 SM00490 helicase superfamily c-terminal domain RG42_RS23905 SM00357 Cold shock protein domain RG42_RS23905 SM00382 ATPases associated with a variety of cellular activities RG42_RS23905 SM00959 Rho termination factor, N-terminal domain RG42_RS23930 SM00984 UDP binding domain RG42_RS24045 SM01219 RG42_RS24045 RG42_RS24125 SM00341 Helicase and RNase D C-terminal RG42_RS24125 SM00487 DEAD-like helicases superfamily RG42_RS24125 SM00490 helicase superfamily c-terminal domain RG42_RS24125 SM00956 RG42_RS24125 RG42_RS24220 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. RG42_RS24760 SM00487 DEAD-like helicases superfamily