Eco28_RS00005	SSF48295	TrpR-like
Eco28_RS00005	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS00010	SSF55979	DNA clamp
Eco28_RS00015	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS00020	SSF54211	Ribosomal protein S5 domain 2-like
Eco28_RS00020	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Eco28_RS00020	SSF56719	Type II DNA topoisomerase
Eco28_RS00025	SSF140804	YidB-like
Eco28_RS00030	SSF56784	HAD-like
Eco28_RS00040	SSF51905	FAD/NAD(P)-binding domain
Eco28_RS00045	SSF82171	DPP6 N-terminal domain-like
Eco28_RS00055	SSF49764	HSP20-like chaperones
Eco28_RS00060	SSF49764	HSP20-like chaperones
Eco28_RS00065	SSF116726	TrkA C-terminal domain-like
Eco28_RS00070	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS00070	SSF64288	Chorismate lyase-like
Eco28_RS00075	SSF55604	Glucose permease domain IIB
Eco28_RS00080	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS00080	SSF56327	LDH C-terminal domain-like
Eco28_RS00085	SSF46689	Homeodomain-like
Eco28_RS00085	SSF51215	Regulatory protein AraC
Eco28_RS00095	SSF53649	Alkaline phosphatase-like
Eco28_RS00120	SSF103473	MFS general substrate transporter
Eco28_RS00150	SSF52467	DHS-like NAD/FAD-binding domain
Eco28_RS00150	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Eco28_RS00155	SSF55021	ACT-like
Eco28_RS00160	SSF53098	Ribonuclease H-like
Eco28_RS00180	SSF46894	C-terminal effector domain of the bipartite response regulators
Eco28_RS00180	SSF52172	CheY-like
Eco28_RS00185	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Eco28_RS00190	SSF103473	MFS general substrate transporter
Eco28_RS00195	SSF103473	MFS general substrate transporter
Eco28_RS00200	SSF51338	Composite domain of metallo-dependent hydrolases
Eco28_RS00200	SSF51556	Metallo-dependent hydrolases
Eco28_RS00215	SSF47413	lambda repressor-like DNA-binding domains
Eco28_RS00230	SSF103473	MFS general substrate transporter
Eco28_RS00235	SSF49373	Invasin/intimin cell-adhesion fragments
Eco28_RS00240	SSF49373	Invasin/intimin cell-adhesion fragments
Eco28_RS00255	SSF46894	C-terminal effector domain of the bipartite response regulators
Eco28_RS00255	SSF48452	TPR-like
Eco28_RS00260	SSF140693	IpaD-like
Eco28_RS00280	SSF48452	TPR-like
Eco28_RS00290	SSF53850	Periplasmic binding protein-like II
Eco28_RS00295	SSF103481	Multidrug resistance efflux transporter EmrE
Eco28_RS00300	SSF103473	MFS general substrate transporter
Eco28_RS00315	SSF103473	MFS general substrate transporter
Eco28_RS00320	SSF117125	Putative glucosidase YicI, C-terminal domain
Eco28_RS00320	SSF51011	Glycosyl hydrolase domain
Eco28_RS00320	SSF51445	(Trans)glycosidases
Eco28_RS00320	SSF74650	Galactose mutarotase-like
Eco28_RS00340	SSF50249	Nucleic acid-binding proteins
Eco28_RS00340	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS00345	SSF75217	alpha/beta knot
Eco28_RS00350	SSF109604	HD-domain/PDEase-like
Eco28_RS00350	SSF55021	ACT-like
Eco28_RS00350	SSF81271	TGS-like
Eco28_RS00350	SSF81301	Nucleotidyltransferase
Eco28_RS00355	SSF63562	RPB6/omega subunit-like
Eco28_RS00360	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS00365	SSF47781	RuvA domain 2-like
Eco28_RS00365	SSF50249	Nucleic acid-binding proteins
Eco28_RS00365	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
Eco28_RS00390	SSF54211	Ribosomal protein S5 domain 2-like
Eco28_RS00390	SSF55666	Ribonuclease PH domain 2-like
Eco28_RS00395	SSF53271	PRTase-like
Eco28_RS00400	SSF46689	Homeodomain-like
Eco28_RS00400	SSF48498	Tetracyclin repressor-like, C-terminal domain
Eco28_RS00405	SSF51283	dUTPase-like
Eco28_RS00410	SSF102645	CoaB-like
Eco28_RS00410	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
Eco28_RS00415	SSF47781	RuvA domain 2-like
Eco28_RS00420	SSF143800	L28p-like
Eco28_RS00425	SSF57829	Zn-binding ribosomal proteins
Eco28_RS00430	SSF46946	S13-like H2TH domain
Eco28_RS00430	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Eco28_RS00430	SSF81624	N-terminal domain of MutM-like DNA repair proteins
Eco28_RS00435	SSF52374	Nucleotidylyl transferase
Eco28_RS00440	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Eco28_RS00445	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Eco28_RS00450	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Eco28_RS00455	SSF56112	Protein kinase-like (PK-like)
Eco28_RS00460	SSF53448	Nucleotide-diphospho-sugar transferases
Eco28_RS00465	SSF53448	Nucleotide-diphospho-sugar transferases
Eco28_RS00470	SSF56112	Protein kinase-like (PK-like)
Eco28_RS00475	SSF53448	Nucleotide-diphospho-sugar transferases
Eco28_RS00490	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Eco28_RS00495	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Eco28_RS00500	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS00505	SSF53383	PLP-dependent transferases
Eco28_RS00510	SSF50129	GroES-like
Eco28_RS00510	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS00515	SSF53448	Nucleotide-diphospho-sugar transferases
Eco28_RS00520	SSF88713	Glycoside hydrolase/deacetylase
Eco28_RS00525	SSF51261	Duplicated hybrid motif
Eco28_RS00530	SSF53649	Alkaline phosphatase-like
Eco28_RS00530	SSF64158	2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
Eco28_RS00540	SSF52821	Rhodanese/Cell cycle control phosphatase
Eco28_RS00545	SSF52833	Thioredoxin-like
Eco28_RS00550	SSF54611	SecB-like
Eco28_RS00555	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Eco28_RS00555	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS00560	SSF51161	Trimeric LpxA-like enzymes
Eco28_RS00565	SSF75217	alpha/beta knot
Eco28_RS00570	SSF51395	FMN-linked oxidoreductases
Eco28_RS00575	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS00575	SSF48008	GntR ligand-binding domain-like
Eco28_RS00610	SSF158668	MtlR-like
Eco28_RS00615	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Eco28_RS00615	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS00620	SSF52794	PTS system IIB component-like
Eco28_RS00620	SSF55804	Phoshotransferase/anion transport protein
Eco28_RS00630	SSF111369	HlyD-like secretion proteins
Eco28_RS00660	SSF47616	GST C-terminal domain-like
Eco28_RS00660	SSF52833	Thioredoxin-like
Eco28_RS00665	SSF53383	PLP-dependent transferases
Eco28_RS00670	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS00670	SSF50447	Translation proteins
Eco28_RS00670	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
Eco28_RS00670	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS00675	SSF56796	Dehydroquinate synthase-like
Eco28_RS00680	SSF53098	Ribonuclease H-like
Eco28_RS00685	SSF56796	Dehydroquinate synthase-like
Eco28_RS00690	SSF140931	Fic-like
Eco28_RS00695	SSF53720	ALDH-like
Eco28_RS00710	SSF111369	HlyD-like secretion proteins
Eco28_RS00715	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS00715	SSF53850	Periplasmic binding protein-like II
Eco28_RS00725	SSF48208	Six-hairpin glycosidases
Eco28_RS00730	SSF103473	MFS general substrate transporter
Eco28_RS00735	SSF46689	Homeodomain-like
Eco28_RS00735	SSF51215	Regulatory protein AraC
Eco28_RS00745	SSF54862	4Fe-4S ferredoxins
Eco28_RS00750	SSF53383	PLP-dependent transferases
Eco28_RS00755	SSF51445	(Trans)glycosidases
Eco28_RS00765	SSF46689	Homeodomain-like
Eco28_RS00765	SSF53822	Periplasmic binding protein-like I
Eco28_RS00775	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS00780	SSF53822	Periplasmic binding protein-like I
Eco28_RS00785	SSF51658	Xylose isomerase-like
Eco28_RS00790	SSF53067	Actin-like ATPase domain
Eco28_RS00815	SSF55681	Class II aaRS and biotin synthetases
Eco28_RS00820	SSF109604	HD-domain/PDEase-like
Eco28_RS00830	SSF50249	Nucleic acid-binding proteins
Eco28_RS00835	SSF47413	lambda repressor-like DNA-binding domains
Eco28_RS00845	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS00845	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
Eco28_RS00850	SSF103088	OmpA-like
Eco28_RS00855	SSF50692	ADC-like
Eco28_RS00855	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Eco28_RS00860	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Eco28_RS00865	SSF48150	DNA-glycosylase
Eco28_RS00870	SSF103515	Autotransporter
Eco28_RS00880	SSF103473	MFS general substrate transporter
Eco28_RS00885	SSF49401	Bacterial adhesins
Eco28_RS00890	SSF49354	PapD-like
Eco28_RS00890	SSF49584	Periplasmic chaperone C-domain
Eco28_RS00895	SSF141729	FimD N-terminal domain-like
Eco28_RS00900	SSF49401	Bacterial adhesins
Eco28_RS00905	SSF49401	Bacterial adhesins
Eco28_RS00910	SSF53649	Alkaline phosphatase-like
Eco28_RS00925	SSF53850	Periplasmic binding protein-like II
Eco28_RS00935	SSF161098	MetI-like
Eco28_RS00940	SSF161098	MetI-like
Eco28_RS00945	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS00950	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS01010	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS01015	SSF141371	PilZ domain-like
Eco28_RS01015	SSF53448	Nucleotide-diphospho-sugar transferases
Eco28_RS01025	SSF48208	Six-hairpin glycosidases
Eco28_RS01030	SSF48452	TPR-like
Eco28_RS01030	SSF81901	HCP-like
Eco28_RS01035	SSF141868	EAL domain-like
Eco28_RS01035	SSF55073	Nucleotide cyclase
Eco28_RS01045	SSF118215	Proton glutamate symport protein
Eco28_RS01055	SSF63411	LuxS/MPP-like metallohydrolase
Eco28_RS01060	SSF53613	Ribokinase-like
Eco28_RS01070	SSF141868	EAL domain-like
Eco28_RS01080	SSF103473	MFS general substrate transporter
Eco28_RS01090	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS01090	SSF53850	Periplasmic binding protein-like II
Eco28_RS01095	SSF46894	C-terminal effector domain of the bipartite response regulators
Eco28_RS01100	SSF48208	Six-hairpin glycosidases
Eco28_RS01105	SSF46626	Cytochrome c
Eco28_RS01110	SSF53383	PLP-dependent transferases
Eco28_RS01115	SSF46689	Homeodomain-like
Eco28_RS01120	SSF46689	Homeodomain-like
Eco28_RS01130	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Eco28_RS01130	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Eco28_RS01130	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Eco28_RS01135	SSF111369	HlyD-like secretion proteins
Eco28_RS01145	SSF46894	C-terminal effector domain of the bipartite response regulators
Eco28_RS01155	SSF47752	Protein HNS-dependent expression A; HdeA
Eco28_RS01170	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS01175	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Eco28_RS01180	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS01190	SSF53807	"Helical backbone" metal receptor
Eco28_RS01200	SSF56935	Porins
Eco28_RS01205	SSF144064	Heme iron utilization protein-like
Eco28_RS01210	SSF46894	C-terminal effector domain of the bipartite response regulators
Eco28_RS01225	SSF141571	Pentapeptide repeat-like
Eco28_RS01235	SSF52833	Thioredoxin-like
Eco28_RS01250	SSF51905	FAD/NAD(P)-binding domain
Eco28_RS01250	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
Eco28_RS01255	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS01260	SSF55486	Metalloproteases ("zincins"), catalytic domain
Eco28_RS01265	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS01270	SSF51366	Ribulose-phoshate binding barrel
Eco28_RS01275	SSF53697	SIS domain
Eco28_RS01280	SSF56784	HAD-like
Eco28_RS01285	SSF56796	Dehydroquinate synthase-like
Eco28_RS01290	SSF55594	HPr-like
Eco28_RS01295	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Eco28_RS01300	SSF100950	NagB/RpiA/CoA transferase-like
Eco28_RS01300	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS01305	SSF55804	Phoshotransferase/anion transport protein
Eco28_RS01310	SSF52794	PTS system IIB component-like
Eco28_RS01315	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS01320	SSF103473	MFS general substrate transporter
Eco28_RS01330	SSF52402	Adenine nucleotide alpha hydrolases-like
Eco28_RS01345	SSF160996	HI0933 insert domain-like
Eco28_RS01345	SSF51905	FAD/NAD(P)-binding domain
Eco28_RS01355	SSF53098	Ribonuclease H-like
Eco28_RS01370	SSF56300	Metallo-dependent phosphatases
Eco28_RS01390	SSF111369	HlyD-like secretion proteins
Eco28_RS01395	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS01410	SSF47598	Ribbon-helix-helix
Eco28_RS01415	SSF47598	Ribbon-helix-helix
Eco28_RS01415	SSF55021	ACT-like
Eco28_RS01420	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS01425	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS01430	SSF161098	MetI-like
Eco28_RS01435	SSF161098	MetI-like
Eco28_RS01440	SSF53850	Periplasmic binding protein-like II
Eco28_RS01445	SSF56214	4'-phosphopantetheinyl transferase
Eco28_RS01450	SSF53901	Thiolase-like
Eco28_RS01455	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS01460	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Eco28_RS01465	SSF53901	Thiolase-like
Eco28_RS01475	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Eco28_RS01480	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
Eco28_RS01485	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Eco28_RS01490	SSF53448	Nucleotide-diphospho-sugar transferases
Eco28_RS01495	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Eco28_RS01500	SSF56801	Acetyl-CoA synthetase-like
Eco28_RS01510	SSF47336	ACP-like
Eco28_RS01515	SSF47336	ACP-like
Eco28_RS01520	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
Eco28_RS01530	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS01545	SSF103473	MFS general substrate transporter
Eco28_RS01560	SSF64307	SirA-like
Eco28_RS01570	SSF55008	HMA, heavy metal-associated domain
Eco28_RS01570	SSF56784	HAD-like
Eco28_RS01570	SSF81653	Calcium ATPase, transduction domain A
Eco28_RS01570	SSF81665	Calcium ATPase, transmembrane domain M
Eco28_RS01590	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS01595	SSF47364	Domain of the SRP/SRP receptor G-proteins
Eco28_RS01595	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS01600	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS01610	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Eco28_RS01610	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Eco28_RS01615	SSF53822	Periplasmic binding protein-like I
Eco28_RS01620	SSF47598	Ribbon-helix-helix
Eco28_RS01625	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Eco28_RS01630	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Eco28_RS01640	SSF53822	Periplasmic binding protein-like I
Eco28_RS01655	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS01660	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS01665	SSF48452	TPR-like
Eco28_RS01670	SSF53850	Periplasmic binding protein-like II
Eco28_RS01675	SSF161098	MetI-like
Eco28_RS01680	SSF161098	MetI-like
Eco28_RS01685	SSF50331	MOP-like
Eco28_RS01685	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS01690	SSF51695	PLC-like phosphodiesterases
Eco28_RS01700	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Eco28_RS01715	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Eco28_RS01725	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS01725	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Eco28_RS01730	SSF51182	RmlC-like cupins
Eco28_RS01735	SSF47413	lambda repressor-like DNA-binding domains
Eco28_RS01735	SSF53822	Periplasmic binding protein-like I
Eco28_RS01740	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS01750	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS01750	SSF53271	PRTase-like
Eco28_RS01755	SSF102405	MCP/YpsA-like
Eco28_RS01765	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS01765	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Eco28_RS01770	SSF51011	Glycosyl hydrolase domain
Eco28_RS01770	SSF51445	(Trans)glycosidases
Eco28_RS01770	SSF81296	E set domains
Eco28_RS01775	SSF51445	(Trans)glycosidases
Eco28_RS01775	SSF81296	E set domains
Eco28_RS01780	SSF51161	Trimeric LpxA-like enzymes
Eco28_RS01780	SSF53448	Nucleotide-diphospho-sugar transferases
Eco28_RS01785	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Eco28_RS01790	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Eco28_RS01795	SSF53850	Periplasmic binding protein-like II
Eco28_RS01800	SSF53850	Periplasmic binding protein-like II
Eco28_RS01805	SSF53098	Ribonuclease H-like
Eco28_RS01825	SSF51905	FAD/NAD(P)-binding domain
Eco28_RS01825	SSF54373	FAD-linked reductases, C-terminal domain
Eco28_RS01830	SSF52821	Rhodanese/Cell cycle control phosphatase
Eco28_RS01835	SSF144091	Rhomboid-like
Eco28_RS01840	SSF100950	NagB/RpiA/CoA transferase-like
Eco28_RS01840	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS01845	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS01850	SSF53098	Ribonuclease H-like
Eco28_RS01855	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS01860	SSF103365	Hypothetical protein PH1602
Eco28_RS01865	SSF52913	RNA 3'-terminal phosphate cyclase, RPTC, insert domain
Eco28_RS01865	SSF55205	EPT/RTPC-like
Eco28_RS01870	SSF46894	C-terminal effector domain of the bipartite response regulators
Eco28_RS01870	SSF48452	TPR-like
Eco28_RS01870	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS01875	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Eco28_RS01880	SSF51445	(Trans)glycosidases
Eco28_RS01890	SSF117916	Fe-S cluster assembly (FSCA) domain-like
Eco28_RS01890	SSF89360	HesB-like domain
Eco28_RS01895	SSF53271	PRTase-like
Eco28_RS01900	SSF53474	alpha/beta-Hydrolases
Eco28_RS01915	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS01920	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS01925	SSF50037	C-terminal domain of transcriptional repressors
Eco28_RS01935	SSF158832	Tex N-terminal region-like
Eco28_RS01935	SSF47781	RuvA domain 2-like
Eco28_RS01935	SSF50249	Nucleic acid-binding proteins
Eco28_RS01935	SSF53098	Ribonuclease H-like
Eco28_RS01940	SSF46557	GreA transcript cleavage protein, N-terminal domain
Eco28_RS01940	SSF54534	FKBP-like
Eco28_RS01950	SSF46894	C-terminal effector domain of the bipartite response regulators
Eco28_RS01950	SSF52172	CheY-like
Eco28_RS01955	SSF47384	Homodimeric domain of signal transducing histidine kinase
Eco28_RS01955	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Eco28_RS01960	SSF53795	PEP carboxykinase-like
Eco28_RS01960	SSF68923	PEP carboxykinase N-terminal domain
Eco28_RS01975	SSF118352	HSP33 redox switch-like
Eco28_RS01975	SSF64397	Hsp33 domain
Eco28_RS01980	SSF55174	Alpha-L RNA-binding motif
Eco28_RS01985	SSF56784	HAD-like
Eco28_RS01995	SSF55811	Nudix
Eco28_RS02000	SSF53955	Lysozyme-like
Eco28_RS02000	SSF56601	beta-lactamase/transpeptidase-like
Eco28_RS02005	SSF53067	Actin-like ATPase domain
Eco28_RS02030	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS02035	SSF56796	Dehydroquinate synthase-like
Eco28_RS02040	SSF110997	Sporulation related repeat
Eco28_RS02045	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS02050	SSF51366	Ribulose-phoshate binding barrel
Eco28_RS02055	SSF56784	HAD-like
Eco28_RS02060	SSF52374	Nucleotidylyl transferase
Eco28_RS02065	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS02065	SSF64288	Chorismate lyase-like
Eco28_RS02070	SSF53613	Ribokinase-like
Eco28_RS02075	SSF51658	Xylose isomerase-like
Eco28_RS02085	SSF53697	SIS domain
Eco28_RS02100	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS02100	SSF53790	Tetrapyrrole methylase
Eco28_RS02100	SSF75615	Siroheme synthase middle domains-like
Eco28_RS02110	SSF50022	ISP domain
Eco28_RS02115	SSF51905	FAD/NAD(P)-binding domain
Eco28_RS02115	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
Eco28_RS02115	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
Eco28_RS02120	SSF103473	MFS general substrate transporter
Eco28_RS02125	SSF50891	Cyclophilin-like
Eco28_RS02135	SSF140931	Fic-like
Eco28_RS02140	SSF52317	Class I glutamine amidotransferase-like
Eco28_RS02145	SSF53383	PLP-dependent transferases
Eco28_RS02155	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS02155	SSF51206	cAMP-binding domain-like
Eco28_RS02165	SSF82784	OsmC-like
Eco28_RS02170	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS02175	SSF118001	YehU-like
Eco28_RS02180	SSF53474	alpha/beta-Hydrolases
Eco28_RS02185	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS02195	SSF52218	Flavoproteins
Eco28_RS02200	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS02210	SSF54534	FKBP-like
Eco28_RS02220	SSF54534	FKBP-like
Eco28_RS02230	SSF75169	DsrEFH-like
Eco28_RS02235	SSF75169	DsrEFH-like
Eco28_RS02240	SSF75169	DsrEFH-like
Eco28_RS02245	SSF50249	Nucleic acid-binding proteins
Eco28_RS02250	SSF47973	Ribosomal protein S7
Eco28_RS02255	SSF50447	Translation proteins
Eco28_RS02255	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS02255	SSF54211	Ribosomal protein S5 domain 2-like
Eco28_RS02255	SSF54980	EF-G C-terminal domain-like
Eco28_RS02260	SSF50447	Translation proteins
Eco28_RS02260	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
Eco28_RS02260	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS02275	SSF47240	Ferritin-like
Eco28_RS02290	SSF54999	Ribosomal protein S10
Eco28_RS02295	SSF50447	Translation proteins
Eco28_RS02300	SSF52166	Ribosomal protein L4
Eco28_RS02305	SSF54189	Ribosomal proteins S24e, L23 and L15e
Eco28_RS02310	SSF50104	Translation proteins SH3-like domain
Eco28_RS02310	SSF50249	Nucleic acid-binding proteins
Eco28_RS02315	SSF54570	Ribosomal protein S19
Eco28_RS02320	SSF54843	Ribosomal protein L22
Eco28_RS02325	SSF54814	Prokaryotic type KH domain (KH-domain type II)
Eco28_RS02325	SSF54821	Ribosomal protein S3 C-terminal domain
Eco28_RS02330	SSF54686	Ribosomal protein L16p/L10e
Eco28_RS02335	SSF46561	Ribosomal protein L29 (L29p)
Eco28_RS02340	SSF50249	Nucleic acid-binding proteins
Eco28_RS02345	SSF50193	Ribosomal protein L14
Eco28_RS02350	SSF50104	Translation proteins SH3-like domain
Eco28_RS02355	SSF55282	RL5-like
Eco28_RS02360	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Eco28_RS02365	SSF56047	Ribosomal protein S8
Eco28_RS02370	SSF56053	Ribosomal protein L6
Eco28_RS02375	SSF53137	Translational machinery components
Eco28_RS02380	SSF54211	Ribosomal protein S5 domain 2-like
Eco28_RS02380	SSF54768	dsRNA-binding domain-like
Eco28_RS02385	SSF55129	Ribosomal protein L30p/L7e
Eco28_RS02390	SSF52080	Ribosomal proteins L15p and L18e
Eco28_RS02395	SSF103491	Preprotein translocase SecY subunit
Eco28_RS02400	SSF57840	Ribosomal protein L36
Eco28_RS02405	SSF46946	S13-like H2TH domain
Eco28_RS02410	SSF53137	Translational machinery components
Eco28_RS02415	SSF55174	Alpha-L RNA-binding motif
Eco28_RS02420	SSF47789	C-terminal domain of RNA polymerase alpha subunit
Eco28_RS02420	SSF55257	RBP11-like subunits of RNA polymerase
Eco28_RS02420	SSF56553	Insert subdomain of RNA polymerase alpha subunit
Eco28_RS02425	SSF64263	Prokaryotic ribosomal protein L17
Eco28_RS02435	SSF46955	Putative DNA-binding domain
Eco28_RS02445	SSF81330	Gated mechanosensitive channel
Eco28_RS02450	SSF116726	TrkA C-terminal domain-like
Eco28_RS02450	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS02455	SSF48013	NusB-like
Eco28_RS02455	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS02460	SSF50486	FMT C-terminal domain-like
Eco28_RS02460	SSF53328	Formyltransferase
Eco28_RS02465	SSF56420	Peptide deformylase
Eco28_RS02470	SSF102405	MCP/YpsA-like
Eco28_RS02480	SSF57783	Zinc beta-ribbon
Eco28_RS02485	SSF55821	YrdC/RibB
Eco28_RS02490	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS02490	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
Eco28_RS02495	SSF160272	Shew3726-like
Eco28_RS02500	SSF51161	Trimeric LpxA-like enzymes
Eco28_RS02540	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS02545	SSF161098	MetI-like
Eco28_RS02550	SSF161098	MetI-like
Eco28_RS02555	SSF53850	Periplasmic binding protein-like II
Eco28_RS02570	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Eco28_RS02570	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Eco28_RS02570	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Eco28_RS02575	SSF111369	HlyD-like secretion proteins
Eco28_RS02585	SSF46689	Homeodomain-like
Eco28_RS02585	SSF48498	Tetracyclin repressor-like, C-terminal domain
Eco28_RS02595	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS02600	SSF46689	Homeodomain-like
Eco28_RS02605	SSF51395	FMN-linked oxidoreductases
Eco28_RS02610	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS02625	SSF51246	Rudiment single hybrid motif
Eco28_RS02625	SSF52440	PreATP-grasp domain
Eco28_RS02625	SSF56059	Glutathione synthetase ATP-binding domain-like
Eco28_RS02630	SSF51230	Single hybrid motif
Eco28_RS02640	SSF50129	GroES-like
Eco28_RS02640	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS02645	SSF141868	EAL domain-like
Eco28_RS02645	SSF55073	Nucleotide cyclase
Eco28_RS02660	SSF53067	Actin-like ATPase domain
Eco28_RS02675	SSF52972	ITPase-like
Eco28_RS02680	SSF50249	Nucleic acid-binding proteins
Eco28_RS02690	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
Eco28_RS02695	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS02695	SSF53850	Periplasmic binding protein-like II
Eco28_RS02705	SSF111369	HlyD-like secretion proteins
Eco28_RS02715	SSF52038	Barstar-related
Eco28_RS02720	SSF159871	YdgH-like
Eco28_RS02725	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS02725	SSF55252	C-terminal domain of arginine repressor
Eco28_RS02730	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS02730	SSF56327	LDH C-terminal domain-like
Eco28_RS02735	SSF50156	PDZ domain-like
Eco28_RS02735	SSF50494	Trypsin-like serine proteases
Eco28_RS02740	SSF50156	PDZ domain-like
Eco28_RS02740	SSF50494	Trypsin-like serine proteases
Eco28_RS02750	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS02755	SSF52161	Ribosomal protein L13
Eco28_RS02760	SSF54211	Ribosomal protein S5 domain 2-like
Eco28_RS02775	SSF47616	GST C-terminal domain-like
Eco28_RS02775	SSF52833	Thioredoxin-like
Eco28_RS02780	SSF101738	SspB-like
Eco28_RS02795	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS02795	SSF48008	GntR ligand-binding domain-like
Eco28_RS02800	SSF51569	Aldolase
Eco28_RS02805	SSF103473	MFS general substrate transporter
Eco28_RS02810	SSF51366	Ribulose-phoshate binding barrel
Eco28_RS02815	SSF53067	Actin-like ATPase domain
Eco28_RS02820	SSF51197	Clavaminate synthase-like
Eco28_RS02830	SSF46548	alpha-helical ferredoxin
Eco28_RS02830	SSF51971	Nucleotide-binding domain
Eco28_RS02835	SSF51395	FMN-linked oxidoreductases
Eco28_RS02835	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Eco28_RS02835	SSF69336	Alpha subunit of glutamate synthase, C-terminal domain
Eco28_RS02850	SSF102114	Radical SAM enzymes
Eco28_RS02855	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
Eco28_RS02855	SSF47384	Homodimeric domain of signal transducing histidine kinase
Eco28_RS02855	SSF52172	CheY-like
Eco28_RS02855	SSF55785	PYP-like sensor domain (PAS domain)
Eco28_RS02855	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Eco28_RS02860	SSF52317	Class I glutamine amidotransferase-like
Eco28_RS02865	SSF53955	Lysozyme-like
Eco28_RS02870	SSF56112	Protein kinase-like (PK-like)
Eco28_RS02875	SSF55594	HPr-like
Eco28_RS02880	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS02885	SSF55804	Phoshotransferase/anion transport protein
Eco28_RS02890	SSF69754	Ribosome binding protein Y (YfiA homologue)
Eco28_RS02900	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS02915	SSF56784	HAD-like
Eco28_RS02920	SSF53697	SIS domain
Eco28_RS02930	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS02950	SSF52091	SpoIIaa-like
Eco28_RS02955	SSF82657	BolA-like
Eco28_RS02960	SSF55205	EPT/RTPC-like
Eco28_RS02965	SSF47413	lambda repressor-like DNA-binding domains
Eco28_RS02970	SSF48576	Terpenoid synthases
Eco28_RS02975	SSF141091	L21p-like
Eco28_RS02980	SSF110324	Ribosomal L27 protein-like
Eco28_RS02985	SSF103481	Multidrug resistance efflux transporter EmrE
Eco28_RS02990	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS02990	SSF82051	Obg GTP-binding protein N-terminal domain
Eco28_RS02995	SSF56601	beta-lactamase/transpeptidase-like
Eco28_RS03000	SSF46557	GreA transcript cleavage protein, N-terminal domain
Eco28_RS03000	SSF54534	FKBP-like
Eco28_RS03005	SSF75471	YhbY-like
Eco28_RS03010	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS03015	SSF140990	FtsH protease domain-like
Eco28_RS03015	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS03020	SSF51717	Dihydropteroate synthetase-like
Eco28_RS03025	SSF53738	Phosphoglucomutase, first 3 domains
Eco28_RS03025	SSF55957	Phosphoglucomutase, C-terminal domain
Eco28_RS03045	SSF53649	Alkaline phosphatase-like
Eco28_RS03050	SSF52402	Adenine nucleotide alpha hydrolases-like
Eco28_RS03050	SSF69864	Argininosuccinate synthetase, C-terminal domain
Eco28_RS03060	SSF74942	YhbC-like, C-terminal domain
Eco28_RS03060	SSF75420	YhbC-like, N-terminal domain
Eco28_RS03065	SSF47794	Rad51 N-terminal domain-like
Eco28_RS03065	SSF50249	Nucleic acid-binding proteins
Eco28_RS03065	SSF54814	Prokaryotic type KH domain (KH-domain type II)
Eco28_RS03065	SSF69705	Transcription factor NusA, N-terminal domain
Eco28_RS03070	SSF46955	Putative DNA-binding domain
Eco28_RS03070	SSF50447	Translation proteins
Eco28_RS03070	SSF52156	Initiation factor IF2/eIF5b, domain 3
Eco28_RS03070	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS03075	SSF89919	Ribosome-binding factor A, RbfA
Eco28_RS03080	SSF55120	Pseudouridine synthase
Eco28_RS03080	SSF88697	PUA domain-like
Eco28_RS03085	SSF47060	S15/NS1 RNA-binding domain
Eco28_RS03090	SSF46915	Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
Eco28_RS03090	SSF50249	Nucleic acid-binding proteins
Eco28_RS03090	SSF54211	Ribosomal protein S5 domain 2-like
Eco28_RS03090	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
Eco28_RS03090	SSF55666	Ribonuclease PH domain 2-like
Eco28_RS03095	SSF48452	TPR-like
Eco28_RS03105	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS03115	SSF51679	Bacterial luciferase-like
Eco28_RS03125	SSF51391	Thiamin phosphate synthase
Eco28_RS03130	SSF55718	SCP-like
Eco28_RS03135	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Eco28_RS03140	SSF82771	GIY-YIG endonuclease
Eco28_RS03145	SSF50475	FMN-binding split barrel
Eco28_RS03150	SSF52317	Class I glutamine amidotransferase-like
Eco28_RS03155	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS03170	SSF53697	SIS domain
Eco28_RS03175	SSF52980	Restriction endonuclease-like
Eco28_RS03180	SSF48435	Bacterial muramidases
Eco28_RS03180	SSF53822	Periplasmic binding protein-like I
Eco28_RS03185	SSF53790	Tetrapyrrole methylase
Eco28_RS03190	SSF49401	Bacterial adhesins
Eco28_RS03195	SSF141729	FimD N-terminal domain-like
Eco28_RS03200	SSF49354	PapD-like
Eco28_RS03200	SSF49584	Periplasmic chaperone C-domain
Eco28_RS03205	SSF49401	Bacterial adhesins
Eco28_RS03210	SSF100950	NagB/RpiA/CoA transferase-like
Eco28_RS03225	SSF52728	PTS IIb component
Eco28_RS03230	SSF51569	Aldolase
Eco28_RS03235	SSF53697	SIS domain
Eco28_RS03240	SSF51338	Composite domain of metallo-dependent hydrolases
Eco28_RS03240	SSF51556	Metallo-dependent hydrolases
Eco28_RS03245	SSF53062	PTS system fructose IIA component-like
Eco28_RS03260	SSF52728	PTS IIb component
Eco28_RS03265	SSF51569	Aldolase
Eco28_RS03275	SSF100950	NagB/RpiA/CoA transferase-like
Eco28_RS03275	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS03285	SSF89447	AbrB/MazE/MraZ-like
Eco28_RS03295	SSF103473	MFS general substrate transporter
Eco28_RS03300	SSF51621	Phosphoenolpyruvate/pyruvate domain
Eco28_RS03305	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Eco28_RS03305	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS03310	SSF110738	Glycerate kinase I
Eco28_RS03320	SSF141571	Pentapeptide repeat-like
Eco28_RS03335	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS03335	SSF53850	Periplasmic binding protein-like II
Eco28_RS03340	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Eco28_RS03350	SSF53067	Actin-like ATPase domain
Eco28_RS03355	SSF51998	PFL-like glycyl radical enzymes
Eco28_RS03360	SSF55298	YjgF-like
Eco28_RS03365	SSF143548	Serine metabolism enzymes domain
Eco28_RS03385	SSF51182	RmlC-like cupins
Eco28_RS03390	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS03390	SSF53850	Periplasmic binding protein-like II
Eco28_RS03410	SSF47616	GST C-terminal domain-like
Eco28_RS03410	SSF52833	Thioredoxin-like
Eco28_RS03450	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS03450	SSF48008	GntR ligand-binding domain-like
Eco28_RS03455	SSF103473	MFS general substrate transporter
Eco28_RS03460	SSF51556	Metallo-dependent hydrolases
Eco28_RS03475	SSF118215	Proton glutamate symport protein
Eco28_RS03490	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS03490	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Eco28_RS03505	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS03515	SSF47413	lambda repressor-like DNA-binding domains
Eco28_RS03520	SSF51395	FMN-linked oxidoreductases
Eco28_RS03520	SSF51905	FAD/NAD(P)-binding domain
Eco28_RS03520	SSF51971	Nucleotide-binding domain
Eco28_RS03530	SSF48208	Six-hairpin glycosidases
Eco28_RS03545	SSF51197	Clavaminate synthase-like
Eco28_RS03550	SSF49303	beta-Galactosidase/glucuronidase domain
Eco28_RS03550	SSF49785	Galactose-binding domain-like
Eco28_RS03550	SSF51445	(Trans)glycosidases
Eco28_RS03550	SSF74650	Galactose mutarotase-like
Eco28_RS03555	SSF47413	lambda repressor-like DNA-binding domains
Eco28_RS03555	SSF53822	Periplasmic binding protein-like I
Eco28_RS03565	SSF50249	Nucleic acid-binding proteins
Eco28_RS03570	SSF53383	PLP-dependent transferases
Eco28_RS03580	SSF55785	PYP-like sensor domain (PAS domain)
Eco28_RS03580	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Eco28_RS03585	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS03595	SSF63380	Riboflavin synthase domain-like
Eco28_RS03605	SSF52141	Uracil-DNA glycosylase-like
Eco28_RS03610	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Eco28_RS03610	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Eco28_RS03620	SSF117023	DNA primase DnaG, C-terminal domain
Eco28_RS03620	SSF56731	DNA primase core
Eco28_RS03620	SSF57783	Zinc beta-ribbon
Eco28_RS03635	SSF53067	Actin-like ATPase domain
Eco28_RS03645	SSF117457	FumA C-terminal domain-like
Eco28_RS03660	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS03660	SSF53850	Periplasmic binding protein-like II
Eco28_RS03670	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
Eco28_RS03680	SSF81301	Nucleotidyltransferase
Eco28_RS03680	SSF81891	Poly A polymerase C-terminal region-like
Eco28_RS03695	SSF55154	CYTH-like phosphatases
Eco28_RS03700	SSF81301	Nucleotidyltransferase
Eco28_RS03700	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
Eco28_RS03705	SSF52374	Nucleotidylyl transferase
Eco28_RS03705	SSF53613	Ribokinase-like
Eco28_RS03715	SSF117892	Band 7/SPFH domain
Eco28_RS03725	SSF109747	Glycogen synthesis protein GlgS
Eco28_RS03735	SSF55821	YrdC/RibB
Eco28_RS03750	SSF53213	LigB-like
Eco28_RS03755	SSF52440	PreATP-grasp domain
Eco28_RS03755	SSF56059	Glutathione synthetase ATP-binding domain-like
Eco28_RS03770	SSF56954	Outer membrane efflux proteins (OEP)
Eco28_RS03775	SSF55811	Nudix
Eco28_RS03785	SSF56300	Metallo-dependent phosphatases
Eco28_RS03790	SSF53474	alpha/beta-Hydrolases
Eco28_RS03795	SSF54211	Ribosomal protein S5 domain 2-like
Eco28_RS03795	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Eco28_RS03795	SSF56719	Type II DNA topoisomerase
Eco28_RS03800	SSF54909	Dimeric alpha+beta barrel
Eco28_RS03805	SSF52218	Flavoproteins
Eco28_RS03810	SSF47384	Homodimeric domain of signal transducing histidine kinase
Eco28_RS03810	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Eco28_RS03815	SSF52172	CheY-like
Eco28_RS03820	SSF101756	Hypothetical protein YgiW
Eco28_RS03825	SSF55136	Probable bacterial effector-binding domain
Eco28_RS03835	SSF47413	lambda repressor-like DNA-binding domains
Eco28_RS03840	SSF53850	Periplasmic binding protein-like II
Eco28_RS03845	SSF101904	GyrA/ParC C-terminal domain-like
Eco28_RS03845	SSF56719	Type II DNA topoisomerase
Eco28_RS03850	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
Eco28_RS03855	SSF49503	Cupredoxins
Eco28_RS03860	SSF102114	Radical SAM enzymes
Eco28_RS03865	SSF58042	Outer membrane lipoprotein
Eco28_RS03875	SSF51430	NAD(P)-linked oxidoreductase
Eco28_RS03880	SSF56796	Dehydroquinate synthase-like
Eco28_RS03885	SSF46689	Homeodomain-like
Eco28_RS03895	SSF53383	PLP-dependent transferases
Eco28_RS03915	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS03925	SSF51430	NAD(P)-linked oxidoreductase
Eco28_RS03930	SSF53474	alpha/beta-Hydrolases
Eco28_RS03945	SSF56770	HydA/Nqo6-like
Eco28_RS03950	SSF54862	4Fe-4S ferredoxins
Eco28_RS03960	SSF56762	HydB/Nqo4-like
Eco28_RS03965	SSF53098	Ribonuclease H-like
Eco28_RS03970	SSF56762	HydB/Nqo4-like
Eco28_RS03975	SSF53163	HybD-like
Eco28_RS03990	SSF159127	HupF/HypC-like
Eco28_RS03995	SSF47616	GST C-terminal domain-like
Eco28_RS03995	SSF52833	Thioredoxin-like
Eco28_RS04000	SSF52440	PreATP-grasp domain
Eco28_RS04000	SSF54001	Cysteine proteinases
Eco28_RS04000	SSF56059	Glutathione synthetase ATP-binding domain-like
Eco28_RS04015	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS04020	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS04025	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS04055	SSF53383	PLP-dependent transferases
Eco28_RS04060	SSF47336	ACP-like
Eco28_RS04065	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS04070	SSF56801	Acetyl-CoA synthetase-like
Eco28_RS04075	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Eco28_RS04080	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS04080	SSF48008	GntR ligand-binding domain-like
Eco28_RS04085	SSF55103	FAD-linked oxidases, C-terminal domain
Eco28_RS04085	SSF56176	FAD-binding/transporter-associated domain-like
Eco28_RS04090	SSF55103	FAD-linked oxidases, C-terminal domain
Eco28_RS04090	SSF56176	FAD-binding/transporter-associated domain-like
Eco28_RS04095	SSF54862	4Fe-4S ferredoxins
Eco28_RS04100	SSF143744	GlcG-like
Eco28_RS04105	SSF51645	Malate synthase G
Eco28_RS04140	SSF50156	PDZ domain-like
Eco28_RS04150	SSF160246	EspE N-terminal domain-like
Eco28_RS04150	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS04160	SSF54523	Pili subunits
Eco28_RS04165	SSF54523	Pili subunits
Eco28_RS04170	SSF54523	Pili subunits
Eco28_RS04175	SSF54523	Pili subunits
Eco28_RS04180	SSF158544	GspK insert domain-like
Eco28_RS04180	SSF54523	Pili subunits
Eco28_RS04185	SSF53067	Actin-like ATPase domain
Eco28_RS04190	SSF103054	General secretion pathway protein M, EpsM
Eco28_RS04210	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS04215	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS04220	SSF158682	TerB-like
Eco28_RS04235	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS04240	SSF56349	DNA breaking-rejoining enzymes
Eco28_RS04265	SSF143737	YeeU-like
Eco28_RS04275	SSF102712	JAB1/MPN domain
Eco28_RS04290	SSF54786	YcfA/nrd intein domain
Eco28_RS04305	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS04320	SSF52980	Restriction endonuclease-like
Eco28_RS04335	SSF81273	H-NS histone-like proteins
Eco28_RS04345	SSF53098	Ribonuclease H-like
Eco28_RS04380	SSF53098	Ribonuclease H-like
Eco28_RS04395	SSF53098	Ribonuclease H-like
Eco28_RS04400	SSF56672	DNA/RNA polymerases
Eco28_RS04420	SSF56925	OMPA-like
Eco28_RS04460	SSF46689	Homeodomain-like
Eco28_RS04465	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS04465	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
Eco28_RS04475	SSF46689	Homeodomain-like
Eco28_RS04475	SSF53697	SIS domain
Eco28_RS04480	SSF48557	L-aspartase-like
Eco28_RS04485	SSF56935	Porins
Eco28_RS04490	SSF52266	SGNH hydrolase
Eco28_RS04510	SSF63829	Calcium-dependent phosphotriesterase
Eco28_RS04520	SSF53850	Periplasmic binding protein-like II
Eco28_RS04540	SSF56349	DNA breaking-rejoining enzymes
Eco28_RS04560	SSF52172	CheY-like
Eco28_RS04560	SSF53383	PLP-dependent transferases
Eco28_RS04560	SSF55904	Ornithine decarboxylase C-terminal domain
Eco28_RS04565	SSF103473	MFS general substrate transporter
Eco28_RS04570	SSF53955	Lysozyme-like
Eco28_RS04575	SSF111148	YggX-like
Eco28_RS04580	SSF48150	DNA-glycosylase
Eco28_RS04580	SSF55811	Nudix
Eco28_RS04590	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS04605	SSF53774	Glutaminase/Asparaginase
Eco28_RS04615	SSF102114	Radical SAM enzymes
Eco28_RS04620	SSF52972	ITPase-like
Eco28_RS04625	SSF69786	YggU-like
Eco28_RS04635	SSF51419	PLP-binding barrel
Eco28_RS04640	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS04645	SSF53098	Ribonuclease H-like
Eco28_RS04650	SSF143456	VC0467-like
Eco28_RS04655	SSF52440	PreATP-grasp domain
Eco28_RS04655	SSF56059	Glutathione synthetase ATP-binding domain-like
Eco28_RS04660	SSF75217	alpha/beta knot
Eco28_RS04660	SSF88697	PUA domain-like
Eco28_RS04665	SSF54060	His-Me finger endonucleases
Eco28_RS04675	SSF103473	MFS general substrate transporter
Eco28_RS04680	SSF55973	S-adenosylmethionine synthetase
Eco28_RS04700	SSF50621	Alanine racemase C-terminal domain-like
Eco28_RS04700	SSF51419	PLP-binding barrel
Eco28_RS04710	SSF52768	Arginase/deacetylase
Eco28_RS04720	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Eco28_RS04720	SSF52922	TK C-terminal domain-like
Eco28_RS04725	SSF117892	Band 7/SPFH domain
Eco28_RS04735	SSF55804	Phoshotransferase/anion transport protein
Eco28_RS04740	SSF52794	PTS system IIB component-like
Eco28_RS04745	SSF50129	GroES-like
Eco28_RS04745	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS04750	SSF56655	Carbohydrate phosphatase
Eco28_RS04755	SSF158668	MtlR-like
Eco28_RS04760	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS04765	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS04770	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS04785	SSF117856	AF0104/ALDC/Ptd012-like
Eco28_RS04795	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS04795	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Eco28_RS04800	SSF53748	Phosphoglycerate kinase
Eco28_RS04805	SSF51569	Aldolase
Eco28_RS04810	SSF50182	Sm-like ribonucleoproteins
Eco28_RS04810	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
Eco28_RS04810	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
Eco28_RS04825	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS04825	SSF53850	Periplasmic binding protein-like II
Eco28_RS04830	SSF100950	NagB/RpiA/CoA transferase-like
Eco28_RS04835	SSF52096	ClpP/crotonase
Eco28_RS04840	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS04845	SSF51703	Cobalamin (vitamin B12)-dependent enzymes
Eco28_RS04845	SSF52242	Cobalamin (vitamin B12)-binding domain
Eco28_RS04855	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS04855	SSF53850	Periplasmic binding protein-like II
Eco28_RS04860	SSF53850	Periplasmic binding protein-like II
Eco28_RS04865	SSF100950	NagB/RpiA/CoA transferase-like
Eco28_RS04865	SSF75445	D-ribose-5-phosphate isomerase (RpiA), lid domain
Eco28_RS04870	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS04870	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
Eco28_RS04870	SSF55021	ACT-like
Eco28_RS04890	SSF100950	NagB/RpiA/CoA transferase-like
Eco28_RS04900	SSF102829	Cell division protein ZapA-like
Eco28_RS04910	SSF101327	YgfB-like
Eco28_RS04915	SSF53092	Creatinase/prolidase N-terminal domain
Eco28_RS04915	SSF55920	Creatinase/aminopeptidase
Eco28_RS04920	SSF51905	FAD/NAD(P)-binding domain
Eco28_RS04925	SSF51905	FAD/NAD(P)-binding domain
Eco28_RS04930	SSF101790	Aminomethyltransferase beta-barrel domain
Eco28_RS04930	SSF103025	Folate-binding domain
Eco28_RS04935	SSF51230	Single hybrid motif
Eco28_RS04940	SSF53383	PLP-dependent transferases
Eco28_RS04945	SSF51445	(Trans)glycosidases
Eco28_RS04950	SSF88697	PUA domain-like
Eco28_RS04960	SSF101790	Aminomethyltransferase beta-barrel domain
Eco28_RS04960	SSF103025	Folate-binding domain
Eco28_RS04970	SSF109910	YgfY-like
Eco28_RS04980	SSF52218	Flavoproteins
Eco28_RS04985	SSF47823	lambda integrase-like, N-terminal domain
Eco28_RS04985	SSF56349	DNA breaking-rejoining enzymes
Eco28_RS04990	SSF52833	Thioredoxin-like
Eco28_RS04990	SSF54423	DsbC/DsbG N-terminal domain-like
Eco28_RS04995	SSF64182	DHH phosphoesterases
Eco28_RS05005	SSF50249	Nucleic acid-binding proteins
Eco28_RS05005	SSF55681	Class II aaRS and biotin synthetases
Eco28_RS05010	SSF55811	Nudix
Eco28_RS05030	SSF51971	Nucleotide-binding domain
Eco28_RS05030	SSF54862	4Fe-4S ferredoxins
Eco28_RS05035	SSF54862	4Fe-4S ferredoxins
Eco28_RS05045	SSF51338	Composite domain of metallo-dependent hydrolases
Eco28_RS05045	SSF51556	Metallo-dependent hydrolases
Eco28_RS05055	SSF47741	CO dehydrogenase ISP C-domain like
Eco28_RS05055	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
Eco28_RS05055	SSF56003	Molybdenum cofactor-binding domain
Eco28_RS05060	SSF55447	CO dehydrogenase flavoprotein C-terminal domain-like
Eco28_RS05060	SSF56176	FAD-binding/transporter-associated domain-like
Eco28_RS05065	SSF51338	Composite domain of metallo-dependent hydrolases
Eco28_RS05065	SSF51556	Metallo-dependent hydrolases
Eco28_RS05070	SSF46548	alpha-helical ferredoxin
Eco28_RS05070	SSF51395	FMN-linked oxidoreductases
Eco28_RS05070	SSF51971	Nucleotide-binding domain
Eco28_RS05075	SSF53448	Nucleotide-diphospho-sugar transferases
Eco28_RS05080	SSF53623	MurD-like peptide ligases, catalytic domain
Eco28_RS05085	SSF53187	Zn-dependent exopeptidases
Eco28_RS05090	SSF53633	Carbamate kinase-like
Eco28_RS05095	SSF51338	Composite domain of metallo-dependent hydrolases
Eco28_RS05095	SSF51556	Metallo-dependent hydrolases
Eco28_RS05100	SSF53187	Zn-dependent exopeptidases
Eco28_RS05100	SSF55031	Bacterial exopeptidase dimerisation domain
Eco28_RS05105	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Eco28_RS05110	SSF53671	Aspartate/ornithine carbamoyltransferase
Eco28_RS05115	SSF46689	Homeodomain-like
Eco28_RS05115	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS05115	SSF55785	PYP-like sensor domain (PAS domain)
Eco28_RS05120	SSF47741	CO dehydrogenase ISP C-domain like
Eco28_RS05120	SSF54292	2Fe-2S ferredoxin-like
Eco28_RS05125	SSF55447	CO dehydrogenase flavoprotein C-terminal domain-like
Eco28_RS05125	SSF56176	FAD-binding/transporter-associated domain-like
Eco28_RS05130	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
Eco28_RS05130	SSF56003	Molybdenum cofactor-binding domain
Eco28_RS05140	SSF51261	Duplicated hybrid motif
Eco28_RS05150	SSF48208	Six-hairpin glycosidases
Eco28_RS05160	SSF46689	Homeodomain-like
Eco28_RS05170	SSF140591	Type III secretion system domain
Eco28_RS05175	SSF90123	ABC transporter transmembrane region
Eco28_RS05180	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS05215	SSF160544	EscU C-terminal domain-like
Eco28_RS05225	SSF46894	C-terminal effector domain of the bipartite response regulators
Eco28_RS05235	SSF140129	MxiH-like
Eco28_RS05260	SSF46894	C-terminal effector domain of the bipartite response regulators
Eco28_RS05260	SSF52172	CheY-like
Eco28_RS05265	SSF53955	Lysozyme-like
Eco28_RS05275	SSF46894	C-terminal effector domain of the bipartite response regulators
Eco28_RS05275	SSF48452	TPR-like
Eco28_RS05280	SSF48452	TPR-like
Eco28_RS05315	SSF46894	C-terminal effector domain of the bipartite response regulators
Eco28_RS05320	SSF46894	C-terminal effector domain of the bipartite response regulators
Eco28_RS05340	SSF53901	Thiolase-like
Eco28_RS05345	SSF51182	RmlC-like cupins
Eco28_RS05350	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS05355	SSF103473	MFS general substrate transporter
Eco28_RS05360	SSF53681	Aspartate/glutamate racemase
Eco28_RS05365	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS05365	SSF53850	Periplasmic binding protein-like II
Eco28_RS05370	SSF50621	Alanine racemase C-terminal domain-like
Eco28_RS05370	SSF51419	PLP-binding barrel
Eco28_RS05375	SSF47413	lambda repressor-like DNA-binding domains
Eco28_RS05375	SSF53822	Periplasmic binding protein-like I
Eco28_RS05380	SSF56801	Acetyl-CoA synthetase-like
Eco28_RS05380	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
Eco28_RS05385	SSF103473	MFS general substrate transporter
Eco28_RS05390	SSF51430	NAD(P)-linked oxidoreductase
Eco28_RS05395	SSF50182	Sm-like ribonucleoproteins
Eco28_RS05405	SSF52980	Restriction endonuclease-like
Eco28_RS05410	SSF55811	Nudix
Eco28_RS05415	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
Eco28_RS05415	SSF51621	Phosphoenolpyruvate/pyruvate domain
Eco28_RS05415	SSF52009	Phosphohistidine domain
Eco28_RS05415	SSF55781	GAF domain-like
Eco28_RS05425	SSF55831	Thymidylate synthase/dCMP hydroxymethylase
Eco28_RS05430	SSF54523	Pili subunits
Eco28_RS05450	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS05450	SSF52980	Restriction endonuclease-like
Eco28_RS05455	SSF63411	LuxS/MPP-like metallohydrolase
Eco28_RS05460	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS05460	SSF52980	Restriction endonuclease-like
Eco28_RS05465	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS05470	SSF53633	Carbamate kinase-like
Eco28_RS05470	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Eco28_RS05475	SSF53187	Zn-dependent exopeptidases
Eco28_RS05500	SSF50685	Barwin-like endoglucanases
Eco28_RS05505	SSF69572	Activating enzymes of the ubiquitin-like proteins
Eco28_RS05510	SSF82649	SufE/NifU
Eco28_RS05515	SSF53383	PLP-dependent transferases
Eco28_RS05520	SSF50182	Sm-like ribonucleoproteins
Eco28_RS05525	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS05525	SSF53850	Periplasmic binding protein-like II
Eco28_RS05535	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS05540	SSF100950	NagB/RpiA/CoA transferase-like
Eco28_RS05540	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS05545	SSF102546	RbsD-like
Eco28_RS05550	SSF53067	Actin-like ATPase domain
Eco28_RS05555	SSF50443	FucI/AraA C-terminal domain-like
Eco28_RS05555	SSF53743	FucI/AraA N-terminal and middle domains
Eco28_RS05560	SSF103473	MFS general substrate transporter
Eco28_RS05565	SSF53639	AraD/HMP-PK domain-like
Eco28_RS05570	SSF56796	Dehydroquinate synthase-like
Eco28_RS05575	SSF47807	5' to 3' exonuclease, C-terminal subdomain
Eco28_RS05575	SSF88723	PIN domain-like
Eco28_RS05580	SSF143548	Serine metabolism enzymes domain
Eco28_RS05590	SSF102405	MCP/YpsA-like
Eco28_RS05595	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
Eco28_RS05605	SSF158452	YqcC-like
Eco28_RS05610	SSF55120	Pseudouridine synthase
Eco28_RS05615	SSF52218	Flavoproteins
Eco28_RS05620	SSF103473	MFS general substrate transporter
Eco28_RS05625	SSF51604	Enolase C-terminal domain-like
Eco28_RS05625	SSF54826	Enolase N-terminal domain-like
Eco28_RS05630	SSF51604	Enolase C-terminal domain-like
Eco28_RS05630	SSF54826	Enolase N-terminal domain-like
Eco28_RS05635	SSF158472	HAMP domain-like
Eco28_RS05635	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
Eco28_RS05635	SSF47384	Homodimeric domain of signal transducing histidine kinase
Eco28_RS05635	SSF52172	CheY-like
Eco28_RS05635	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Eco28_RS05640	SSF50249	Nucleic acid-binding proteins
Eco28_RS05640	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS05645	SSF109604	HD-domain/PDEase-like
Eco28_RS05645	SSF55021	ACT-like
Eco28_RS05645	SSF81271	TGS-like
Eco28_RS05645	SSF81301	Nucleotidyltransferase
Eco28_RS05650	SSF89447	AbrB/MazE/MraZ-like
Eco28_RS05655	SSF50118	Cell growth inhibitor/plasmid maintenance toxic component
Eco28_RS05660	SSF101386	all-alpha NTP pyrophosphatases
Eco28_RS05665	SSF52317	Class I glutamine amidotransferase-like
Eco28_RS05665	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS05670	SSF51604	Enolase C-terminal domain-like
Eco28_RS05670	SSF54826	Enolase N-terminal domain-like
Eco28_RS05690	SSF140478	LemA-like
Eco28_RS05695	SSF102114	Radical SAM enzymes
Eco28_RS05700	SSF53067	Actin-like ATPase domain
Eco28_RS05705	SSF103473	MFS general substrate transporter
Eco28_RS05710	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS05715	SSF55103	FAD-linked oxidases, C-terminal domain
Eco28_RS05715	SSF56176	FAD-binding/transporter-associated domain-like
Eco28_RS05720	SSF103473	MFS general substrate transporter
Eco28_RS05725	SSF52402	Adenine nucleotide alpha hydrolases-like
Eco28_RS05730	SSF52402	Adenine nucleotide alpha hydrolases-like
Eco28_RS05730	SSF52467	DHS-like NAD/FAD-binding domain
Eco28_RS05735	SSF110391	GlpP-like
Eco28_RS05740	SSF54862	4Fe-4S ferredoxins
Eco28_RS05745	SSF51905	FAD/NAD(P)-binding domain
Eco28_RS05745	SSF54373	FAD-linked reductases, C-terminal domain
Eco28_RS05750	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
Eco28_RS05755	SSF52218	Flavoproteins
Eco28_RS05755	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
Eco28_RS05755	SSF63380	Riboflavin synthase domain-like
Eco28_RS05760	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
Eco28_RS05760	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
Eco28_RS05765	SSF52402	Adenine nucleotide alpha hydrolases-like
Eco28_RS05780	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS05810	SSF117987	CRISPR-associated protein
Eco28_RS05825	SSF53187	Zn-dependent exopeptidases
Eco28_RS05830	SSF52402	Adenine nucleotide alpha hydrolases-like
Eco28_RS05835	SSF50447	Translation proteins
Eco28_RS05835	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
Eco28_RS05835	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS05840	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS05855	SSF53448	Nucleotide-diphospho-sugar transferases
Eco28_RS05860	SSF69765	IpsF-like
Eco28_RS05865	SSF55120	Pseudouridine synthase
Eco28_RS05870	SSF64167	SurE-like
Eco28_RS05875	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS05880	SSF51261	Duplicated hybrid motif
Eco28_RS05885	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Eco28_RS05885	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Eco28_RS05890	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS05895	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
Eco28_RS05900	SSF143968	UbiD C-terminal domain-like
Eco28_RS05900	SSF50475	FMN-binding split barrel
Eco28_RS05910	SSF56300	Metallo-dependent phosphatases
Eco28_RS05915	SSF48334	DNA repair protein MutS, domain III
Eco28_RS05915	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS05915	SSF53150	DNA repair protein MutS, domain II
Eco28_RS05915	SSF55271	DNA repair protein MutS, domain I
Eco28_RS05930	SSF46689	Homeodomain-like
Eco28_RS05930	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS05930	SSF55781	GAF domain-like
Eco28_RS05935	SSF55326	PurM N-terminal domain-like
Eco28_RS05935	SSF56042	PurM C-terminal domain-like
Eco28_RS05945	SSF159127	HupF/HypC-like
Eco28_RS05950	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS05970	SSF54862	4Fe-4S ferredoxins
Eco28_RS05985	SSF143243	Nqo5-like
Eco28_RS05985	SSF56762	HydB/Nqo4-like
Eco28_RS05990	SSF54862	4Fe-4S ferredoxins
Eco28_RS05995	SSF56770	HydA/Nqo6-like
Eco28_RS06005	SSF53163	HybD-like
Eco28_RS06010	SSF47413	lambda repressor-like DNA-binding domains
Eco28_RS06015	SSF51445	(Trans)glycosidases
Eco28_RS06020	SSF55604	Glucose permease domain IIB
Eco28_RS06025	SSF47413	lambda repressor-like DNA-binding domains
Eco28_RS06025	SSF53822	Periplasmic binding protein-like I
Eco28_RS06030	SSF54862	4Fe-4S ferredoxins
Eco28_RS06035	SSF54975	Acylphosphatase/BLUF domain-like
Eco28_RS06035	SSF55821	YrdC/RibB
Eco28_RS06040	SSF51905	FAD/NAD(P)-binding domain
Eco28_RS06045	SSF52218	Flavoproteins
Eco28_RS06045	SSF56281	Metallo-hydrolase/oxidoreductase
Eco28_RS06045	SSF57802	Rubredoxin-like
Eco28_RS06050	SSF46689	Homeodomain-like
Eco28_RS06050	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS06050	SSF55781	GAF domain-like
Eco28_RS06055	SSF53697	SIS domain
Eco28_RS06055	SSF54631	CBS-domain pair
Eco28_RS06060	SSF100950	NagB/RpiA/CoA transferase-like
Eco28_RS06060	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS06070	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS06075	SSF141530	PTSIIA/GutA-like
Eco28_RS06090	SSF53955	Lysozyme-like
Eco28_RS06095	SSF142433	CinA-like
Eco28_RS06100	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS06100	SSF54752	RecA protein, C-terminal domain
Eco28_RS06110	SSF101353	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
Eco28_RS06110	SSF50447	Translation proteins
Eco28_RS06110	SSF55186	ThrRS/AlaRS common domain
Eco28_RS06110	SSF55681	Class II aaRS and biotin synthetases
Eco28_RS06115	SSF117130	CsrA-like
Eco28_RS06140	SSF56784	HAD-like
Eco28_RS06150	SSF55931	Glutamine synthetase/guanido kinase
Eco28_RS06155	SSF63411	LuxS/MPP-like metallohydrolase
Eco28_RS06160	SSF103473	MFS general substrate transporter
Eco28_RS06165	SSF111369	HlyD-like secretion proteins
Eco28_RS06170	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS06185	SSF103473	MFS general substrate transporter
Eco28_RS06190	SSF53850	Periplasmic binding protein-like II
Eco28_RS06195	SSF161098	MetI-like
Eco28_RS06200	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS06200	SSF54631	CBS-domain pair
Eco28_RS06210	SSF47240	Ferritin-like
Eco28_RS06215	SSF48168	R1 subunit of ribonucleotide reductase, N-terminal domain
Eco28_RS06215	SSF51998	PFL-like glycyl radical enzymes
Eco28_RS06220	SSF52218	Flavoproteins
Eco28_RS06225	SSF52833	Thioredoxin-like
Eco28_RS06235	SSF69118	AhpD-like
Eco28_RS06240	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS06240	SSF53383	PLP-dependent transferases
Eco28_RS06250	SSF159894	YgaC/TfoX-N like
Eco28_RS06260	SSF81273	H-NS histone-like proteins
Eco28_RS06265	SSF52821	Rhodanese/Cell cycle control phosphatase
Eco28_RS06270	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS06280	SSF54106	LysM domain
Eco28_RS06285	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS06285	SSF48008	GntR ligand-binding domain-like
Eco28_RS06295	SSF53383	PLP-dependent transferases
Eco28_RS06300	SSF53720	ALDH-like
Eco28_RS06305	SSF51905	FAD/NAD(P)-binding domain
Eco28_RS06310	SSF51197	Clavaminate synthase-like
Eco28_RS06315	SSF51011	Glycosyl hydrolase domain
Eco28_RS06315	SSF51445	(Trans)glycosidases
Eco28_RS06335	SSF53041	Resolvase-like
Eco28_RS06350	SSF103515	Autotransporter
Eco28_RS06350	SSF51126	Pectin lyase-like
Eco28_RS06365	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS06365	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS06365	SSF57783	Zinc beta-ribbon
Eco28_RS06390	SSF46955	Putative DNA-binding domain
Eco28_RS06430	SSF56349	DNA breaking-rejoining enzymes
Eco28_RS06440	SSF74982	Small protein B (SmpB)
Eco28_RS06445	SSF55961	Bet v1-like
Eco28_RS06450	SSF54285	MoaD/ThiS
Eco28_RS06460	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS06465	SSF111331	NAD kinase/diacylglycerol kinase-like
Eco28_RS06475	SSF51064	Head domain of nucleotide exchange factor GrpE
Eco28_RS06475	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE
Eco28_RS06480	SSF54631	CBS-domain pair
Eco28_RS06480	SSF56176	FAD-binding/transporter-associated domain-like
Eco28_RS06490	SSF47446	Signal peptide-binding domain
Eco28_RS06490	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS06495	SSF54565	Ribosomal protein S16
Eco28_RS06500	SSF50346	PRC-barrel domain
Eco28_RS06500	SSF50447	Translation proteins
Eco28_RS06505	SSF75217	alpha/beta knot
Eco28_RS06510	SSF50104	Translation proteins SH3-like domain
Eco28_RS06515	SSF103088	OmpA-like
Eco28_RS06520	SSF55073	Nucleotide cyclase
Eco28_RS06535	SSF51569	Aldolase
Eco28_RS06540	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Eco28_RS06540	SSF48600	Chorismate mutase II
Eco28_RS06540	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS06545	SSF48600	Chorismate mutase II
Eco28_RS06545	SSF53850	Periplasmic binding protein-like II
Eco28_RS06545	SSF55021	ACT-like
Eco28_RS06550	SSF56349	DNA breaking-rejoining enzymes
Eco28_RS06555	SSF47413	lambda repressor-like DNA-binding domains
Eco28_RS06585	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS06610	SSF53067	Actin-like ATPase domain
Eco28_RS06640	SSF46689	Homeodomain-like
Eco28_RS06675	SSF55166	Hedgehog/DD-peptidase
Eco28_RS06700	SSF69255	gp5 N-terminal domain-like
Eco28_RS06705	SSF160719	gpW/gp25-like
Eco28_RS06720	SSF88874	Receptor-binding domain of short tail fibre protein gp12
Eco28_RS06740	SSF46689	Homeodomain-like
Eco28_RS06740	SSF53041	Resolvase-like
Eco28_RS06775	SSF69279	Phage tail proteins
Eco28_RS06805	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS06810	SSF69754	Ribosome binding protein Y (YfiA homologue)
Eco28_RS06820	SSF48452	TPR-like
Eco28_RS06825	SSF55120	Pseudouridine synthase
Eco28_RS06825	SSF55174	Alpha-L RNA-binding motif
Eco28_RS06830	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
Eco28_RS06835	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS06835	SSF81923	Double Clp-N motif
Eco28_RS06865	SSF103473	MFS general substrate transporter
Eco28_RS06875	SSF56024	Phospholipase D/nuclease
Eco28_RS06880	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS06880	SSF52210	Succinyl-CoA synthetase domains
Eco28_RS06880	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Eco28_RS06880	SSF56059	Glutathione synthetase ATP-binding domain-like
Eco28_RS06890	SSF52833	Thioredoxin-like
Eco28_RS06900	SSF55315	L30e-like
Eco28_RS06900	SSF75217	alpha/beta knot
Eco28_RS06905	SSF52141	Uracil-DNA glycosylase-like
Eco28_RS06910	SSF51998	PFL-like glycyl radical enzymes
Eco28_RS06920	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS06920	SSF53850	Periplasmic binding protein-like II
Eco28_RS06925	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS06930	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS06935	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
Eco28_RS06935	SSF51905	FAD/NAD(P)-binding domain
Eco28_RS06935	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Eco28_RS06940	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Eco28_RS06940	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Eco28_RS06945	SSF89069	N-terminal, cytoplasmic domain of anti-sigmaE factor RseA
Eco28_RS06960	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS06960	SSF54980	EF-G C-terminal domain-like
Eco28_RS06965	SSF51306	LexA/Signal peptidase
Eco28_RS06975	SSF54768	dsRNA-binding domain-like
Eco28_RS06975	SSF69065	RNase III domain-like
Eco28_RS06980	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS06980	SSF54814	Prokaryotic type KH domain (KH-domain type II)
Eco28_RS06985	SSF50249	Nucleic acid-binding proteins
Eco28_RS06985	SSF57863	ArfGap/RecO-like zinc finger
Eco28_RS06990	SSF63892	Pyridoxine 5'-phosphate synthase
Eco28_RS06995	SSF56214	4'-phosphopantetheinyl transferase
Eco28_RS07015	SSF54862	4Fe-4S ferredoxins
Eco28_RS07020	SSF46689	Homeodomain-like
Eco28_RS07020	SSF53697	SIS domain
Eco28_RS07025	SSF56784	HAD-like
Eco28_RS07030	SSF53927	Cytidine deaminase-like
Eco28_RS07035	SSF53850	Periplasmic binding protein-like II
Eco28_RS07035	SSF53955	Lysozyme-like
Eco28_RS07045	SSF109736	FGAM synthase PurL, linker domain
Eco28_RS07045	SSF52317	Class I glutamine amidotransferase-like
Eco28_RS07045	SSF55326	PurM N-terminal domain-like
Eco28_RS07045	SSF56042	PurM C-terminal domain-like
Eco28_RS07045	SSF82697	PurS-like
Eco28_RS07050	SSF47384	Homodimeric domain of signal transducing histidine kinase
Eco28_RS07050	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Eco28_RS07060	SSF46689	Homeodomain-like
Eco28_RS07060	SSF52172	CheY-like
Eco28_RS07060	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS07065	SSF54913	GlnB-like
Eco28_RS07070	SSF46458	Globin-like
Eco28_RS07070	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
Eco28_RS07070	SSF63380	Riboflavin synthase domain-like
Eco28_RS07075	SSF53383	PLP-dependent transferases
Eco28_RS07080	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS07080	SSF53067	Actin-like ATPase domain
Eco28_RS07085	SSF48452	TPR-like
Eco28_RS07090	SSF53822	Periplasmic binding protein-like I
Eco28_RS07095	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS07105	SSF50129	GroES-like
Eco28_RS07105	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS07110	SSF74650	Galactose mutarotase-like
Eco28_RS07120	SSF51905	FAD/NAD(P)-binding domain
Eco28_RS07120	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
Eco28_RS07125	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS07130	SSF50022	ISP domain
Eco28_RS07135	SSF54427	NTF2-like
Eco28_RS07140	SSF50022	ISP domain
Eco28_RS07140	SSF55961	Bet v1-like
Eco28_RS07145	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS07145	SSF53850	Periplasmic binding protein-like II
Eco28_RS07150	SSF103473	MFS general substrate transporter
Eco28_RS07155	SSF63520	PTS-regulatory domain, PRD
Eco28_RS07160	SSF53474	alpha/beta-Hydrolases
Eco28_RS07165	SSF56655	Carbohydrate phosphatase
Eco28_RS07170	SSF75217	alpha/beta knot
Eco28_RS07175	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS07180	SSF53383	PLP-dependent transferases
Eco28_RS07185	SSF82649	SufE/NifU
Eco28_RS07190	SSF89360	HesB-like domain
Eco28_RS07195	SSF46565	Chaperone J-domain
Eco28_RS07195	SSF47144	HSC20 (HSCB), C-terminal oligomerisation domain
Eco28_RS07200	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
Eco28_RS07200	SSF100934	Heat shock protein 70kD (HSP70), C-terminal subdomain
Eco28_RS07200	SSF53067	Actin-like ATPase domain
Eco28_RS07205	SSF54292	2Fe-2S ferredoxin-like
Eco28_RS07210	SSF140319	IscX-like
Eco28_RS07215	SSF53187	Zn-dependent exopeptidases
Eco28_RS07225	SSF52821	Rhodanese/Cell cycle control phosphatase
Eco28_RS07230	SSF48239	Terpenoid cyclases/Protein prenyltransferases
Eco28_RS07235	SSF53955	Lysozyme-like
Eco28_RS07235	SSF56601	beta-lactamase/transpeptidase-like
Eco28_RS07240	SSF50692	ADC-like
Eco28_RS07240	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Eco28_RS07245	SSF54862	4Fe-4S ferredoxins
Eco28_RS07255	SSF54862	4Fe-4S ferredoxins
Eco28_RS07260	SSF54919	Nucleoside diphosphate kinase, NDK
Eco28_RS07265	SSF102114	Radical SAM enzymes
Eco28_RS07270	SSF47413	lambda repressor-like DNA-binding domains
Eco28_RS07275	SSF51717	Dihydropteroate synthetase-like
Eco28_RS07275	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
Eco28_RS07280	SSF52954	Class II aaRS ABD-related
Eco28_RS07280	SSF55681	Class II aaRS and biotin synthetases
Eco28_RS07285	SSF48452	TPR-like
Eco28_RS07290	SSF50998	Quinoprotein alcohol dehydrogenase-like
Eco28_RS07295	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS07300	SSF161187	YfgJ-like
Eco28_RS07310	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
Eco28_RS07310	SSF54631	CBS-domain pair
Eco28_RS07315	SSF52317	Class I glutamine amidotransferase-like
Eco28_RS07315	SSF52402	Adenine nucleotide alpha hydrolases-like
Eco28_RS07315	SSF54810	GMP synthetase C-terminal dimerisation domain
Eco28_RS07320	SSF56349	DNA breaking-rejoining enzymes
Eco28_RS07325	SSF56300	Metallo-dependent phosphatases
Eco28_RS07330	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS07340	SSF46955	Putative DNA-binding domain
Eco28_RS07360	SSF47413	lambda repressor-like DNA-binding domains
Eco28_RS07570	SSF53955	Lysozyme-like
Eco28_RS07605	SSF141868	EAL domain-like
Eco28_RS07610	SSF109604	HD-domain/PDEase-like
Eco28_RS07610	SSF53067	Actin-like ATPase domain
Eco28_RS07615	SSF140356	PPK N-terminal domain-like
Eco28_RS07615	SSF143724	PHP14-like
Eco28_RS07615	SSF56024	Phospholipase D/nuclease
Eco28_RS07620	SSF53328	Formyltransferase
Eco28_RS07625	SSF55326	PurM N-terminal domain-like
Eco28_RS07625	SSF56042	PurM C-terminal domain-like
Eco28_RS07635	SSF53271	PRTase-like
Eco28_RS07645	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS07650	SSF52833	Thioredoxin-like
Eco28_RS07655	SSF48452	TPR-like
Eco28_RS07670	SSF46689	Homeodomain-like
Eco28_RS07670	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS07670	SSF55781	GAF domain-like
Eco28_RS07680	SSF56770	HydA/Nqo6-like
Eco28_RS07685	SSF54862	4Fe-4S ferredoxins
Eco28_RS07690	SSF143243	Nqo5-like
Eco28_RS07690	SSF56762	HydB/Nqo4-like
Eco28_RS07720	SSF54862	4Fe-4S ferredoxins
Eco28_RS07725	SSF52833	Thioredoxin-like
Eco28_RS07730	SSF55021	ACT-like
Eco28_RS07735	SSF51569	Aldolase
Eco28_RS07745	SSF56104	SAICAR synthase-like
Eco28_RS07750	SSF89447	AbrB/MazE/MraZ-like
Eco28_RS07755	SSF88723	PIN domain-like
Eco28_RS07765	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS07765	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Eco28_RS07770	SSF53474	alpha/beta-Hydrolases
Eco28_RS07780	SSF53187	Zn-dependent exopeptidases
Eco28_RS07780	SSF55031	Bacterial exopeptidase dimerisation domain
Eco28_RS07785	SSF52833	Thioredoxin-like
Eco28_RS07800	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Eco28_RS07800	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Eco28_RS07800	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Eco28_RS07805	SSF158472	HAMP domain-like
Eco28_RS07805	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Eco28_RS07810	SSF51971	Nucleotide-binding domain
Eco28_RS07810	SSF54862	4Fe-4S ferredoxins
Eco28_RS07815	SSF55811	Nudix
Eco28_RS07825	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Eco28_RS07825	SSF52922	TK C-terminal domain-like
Eco28_RS07830	SSF51569	Aldolase
Eco28_RS07840	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS07840	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
Eco28_RS07840	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
Eco28_RS07845	SSF143414	CcmK-like
Eco28_RS07850	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS07855	SSF51182	RmlC-like cupins
Eco28_RS07860	SSF89028	Cobalamin adenosyltransferase-like
Eco28_RS07865	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
Eco28_RS07870	SSF143414	CcmK-like
Eco28_RS07875	SSF159133	EutN/CcmL-like
Eco28_RS07880	SSF53720	ALDH-like
Eco28_RS07885	SSF53067	Actin-like ATPase domain
Eco28_RS07890	SSF56796	Dehydroquinate synthase-like
Eco28_RS07900	SSF53067	Actin-like ATPase domain
Eco28_RS07915	SSF143414	CcmK-like
Eco28_RS07920	SSF143414	CcmK-like
Eco28_RS07925	SSF46689	Homeodomain-like
Eco28_RS07930	SSF102886	Coproporphyrinogen III oxidase
Eco28_RS07935	SSF53187	Zn-dependent exopeptidases
Eco28_RS07940	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Eco28_RS07955	SSF54909	Dimeric alpha+beta barrel
Eco28_RS07960	SSF56601	beta-lactamase/transpeptidase-like
Eco28_RS07965	SSF55604	Glucose permease domain IIB
Eco28_RS07970	SSF53697	SIS domain
Eco28_RS07975	SSF46689	Homeodomain-like
Eco28_RS07975	SSF53697	SIS domain
Eco28_RS07980	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS07985	SSF53850	Periplasmic binding protein-like II
Eco28_RS07990	SSF161098	MetI-like
Eco28_RS07995	SSF161098	MetI-like
Eco28_RS08000	SSF50331	MOP-like
Eco28_RS08000	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS08005	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Eco28_RS08015	SSF53613	Ribokinase-like
Eco28_RS08020	SSF51261	Duplicated hybrid motif
Eco28_RS08025	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
Eco28_RS08025	SSF51621	Phosphoenolpyruvate/pyruvate domain
Eco28_RS08025	SSF52009	Phosphohistidine domain
Eco28_RS08030	SSF55594	HPr-like
Eco28_RS08035	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Eco28_RS08045	SSF64383	Cell-division protein ZipA, C-terminal domain
Eco28_RS08050	SSF47781	RuvA domain 2-like
Eco28_RS08050	SSF50249	Nucleic acid-binding proteins
Eco28_RS08050	SSF52113	BRCT domain
Eco28_RS08050	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
Eco28_RS08065	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS08065	SSF53850	Periplasmic binding protein-like II
Eco28_RS08100	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
Eco28_RS08100	SSF52374	Nucleotidylyl transferase
Eco28_RS08105	SSF143422	Transposase IS200-like
Eco28_RS08115	SSF46955	Putative DNA-binding domain
Eco28_RS08120	SSF46955	Putative DNA-binding domain
Eco28_RS08135	SSF141868	EAL domain-like
Eco28_RS08135	SSF55073	Nucleotide cyclase
Eco28_RS08155	SSF81340	Clc chloride channel
Eco28_RS08160	SSF53067	Actin-like ATPase domain
Eco28_RS08165	SSF52794	PTS system IIB component-like
Eco28_RS08175	SSF53092	Creatinase/prolidase N-terminal domain
Eco28_RS08175	SSF55920	Creatinase/aminopeptidase
Eco28_RS08180	SSF101821	Aminopeptidase/glucanase lid domain
Eco28_RS08180	SSF53187	Zn-dependent exopeptidases
Eco28_RS08185	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
Eco28_RS08185	SSF51621	Phosphoenolpyruvate/pyruvate domain
Eco28_RS08185	SSF52009	Phosphohistidine domain
Eco28_RS08185	SSF55594	HPr-like
Eco28_RS08185	SSF55804	Phoshotransferase/anion transport protein
Eco28_RS08190	SSF46689	Homeodomain-like
Eco28_RS08195	SSF52172	CheY-like
Eco28_RS08200	SSF55781	GAF domain-like
Eco28_RS08200	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Eco28_RS08205	SSF53383	PLP-dependent transferases
Eco28_RS08235	SSF89796	CoA-transferase family III (CaiB/BaiF)
Eco28_RS08240	SSF52467	DHS-like NAD/FAD-binding domain
Eco28_RS08240	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Eco28_RS08250	SSF89796	CoA-transferase family III (CaiB/BaiF)
Eco28_RS08255	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
Eco28_RS08255	SSF47384	Homodimeric domain of signal transducing histidine kinase
Eco28_RS08255	SSF52172	CheY-like
Eco28_RS08255	SSF53850	Periplasmic binding protein-like II
Eco28_RS08255	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Eco28_RS08260	SSF46894	C-terminal effector domain of the bipartite response regulators
Eco28_RS08260	SSF52172	CheY-like
Eco28_RS08265	SSF111369	HlyD-like secretion proteins
Eco28_RS08270	SSF103473	MFS general substrate transporter
Eco28_RS08275	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Eco28_RS08285	SSF47413	lambda repressor-like DNA-binding domains
Eco28_RS08285	SSF53822	Periplasmic binding protein-like I
Eco28_RS08290	SSF49899	Concanavalin A-like lectins/glucanases
Eco28_RS08290	SSF75005	Arabinanase/levansucrase/invertase
Eco28_RS08295	SSF53613	Ribokinase-like
Eco28_RS08300	SSF103473	MFS general substrate transporter
Eco28_RS08335	SSF56935	Porins
Eco28_RS08350	SSF53901	Thiolase-like
Eco28_RS08355	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Eco28_RS08355	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS08355	SSF52096	ClpP/crotonase
Eco28_RS08360	SSF53254	Phosphoglycerate mutase-like
Eco28_RS08365	SSF49401	Bacterial adhesins
Eco28_RS08370	SSF141729	FimD N-terminal domain-like
Eco28_RS08375	SSF49354	PapD-like
Eco28_RS08375	SSF49584	Periplasmic chaperone C-domain
Eco28_RS08380	SSF49401	Bacterial adhesins
Eco28_RS08385	SSF49401	Bacterial adhesins
Eco28_RS08390	SSF49401	Bacterial adhesins
Eco28_RS08400	SSF160443	SMR domain-like
Eco28_RS08405	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS08410	SSF103263	Chorismate synthase, AroC
Eco28_RS08415	SSF55166	Hedgehog/DD-peptidase
Eco28_RS08435	SSF51905	FAD/NAD(P)-binding domain
Eco28_RS08440	SSF53901	Thiolase-like
Eco28_RS08450	SSF103473	MFS general substrate transporter
Eco28_RS08460	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS08460	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
Eco28_RS08465	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS08465	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Eco28_RS08470	SSF55120	Pseudouridine synthase
Eco28_RS08480	SSF52096	ClpP/crotonase
Eco28_RS08485	SSF53244	MurD-like peptide ligases, peptide-binding domain
Eco28_RS08485	SSF53623	MurD-like peptide ligases, catalytic domain
Eco28_RS08490	SSF110997	Sporulation related repeat
Eco28_RS08500	SSF53271	PRTase-like
Eco28_RS08500	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Eco28_RS08505	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
Eco28_RS08510	SSF53850	Periplasmic binding protein-like II
Eco28_RS08515	SSF53850	Periplasmic binding protein-like II
Eco28_RS08520	SSF161098	MetI-like
Eco28_RS08525	SSF161098	MetI-like
Eco28_RS08530	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS08540	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS08545	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
Eco28_RS08550	SSF47616	GST C-terminal domain-like
Eco28_RS08550	SSF52833	Thioredoxin-like
Eco28_RS08555	SSF47616	GST C-terminal domain-like
Eco28_RS08555	SSF52833	Thioredoxin-like
Eco28_RS08560	SSF56300	Metallo-dependent phosphatases
Eco28_RS08565	SSF55811	Nudix
Eco28_RS08575	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS08575	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
Eco28_RS08575	SSF75138	HprK N-terminal domain-like
Eco28_RS08580	SSF53067	Actin-like ATPase domain
Eco28_RS08590	SSF116960	YfbU-like
Eco28_RS08595	SSF56784	HAD-like
Eco28_RS08600	SSF116726	TrkA C-terminal domain-like
Eco28_RS08605	SSF109604	HD-domain/PDEase-like
Eco28_RS08610	SSF53383	PLP-dependent transferases
Eco28_RS08620	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS08620	SSF53850	Periplasmic binding protein-like II
Eco28_RS08630	SSF56770	HydA/Nqo6-like
Eco28_RS08635	SSF143243	Nqo5-like
Eco28_RS08635	SSF56762	HydB/Nqo4-like
Eco28_RS08640	SSF52833	Thioredoxin-like
Eco28_RS08645	SSF140490	Nqo1C-terminal domain-like
Eco28_RS08645	SSF142019	Nqo1 FMN-binding domain-like
Eco28_RS08645	SSF142984	Nqo1 middle domain-like
Eco28_RS08650	SSF50692	ADC-like
Eco28_RS08650	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Eco28_RS08650	SSF54292	2Fe-2S ferredoxin-like
Eco28_RS08650	SSF54862	4Fe-4S ferredoxins
Eco28_RS08660	SSF54862	4Fe-4S ferredoxins
Eco28_RS08705	SSF111069	Hypothetical protein yfbM
Eco28_RS08715	SSF53098	Ribonuclease H-like
Eco28_RS08720	SSF53187	Zn-dependent exopeptidases
Eco28_RS08730	SSF54001	Cysteine proteinases
Eco28_RS08735	SSF56281	Metallo-hydrolase/oxidoreductase
Eco28_RS08740	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Eco28_RS08750	SSF56322	ADC synthase
Eco28_RS08755	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Eco28_RS08760	SSF53474	alpha/beta-Hydrolases
Eco28_RS08765	SSF52096	ClpP/crotonase
Eco28_RS08770	SSF51604	Enolase C-terminal domain-like
Eco28_RS08770	SSF54826	Enolase N-terminal domain-like
Eco28_RS08775	SSF56801	Acetyl-CoA synthetase-like
Eco28_RS08785	SSF103481	Multidrug resistance efflux transporter EmrE
Eco28_RS08790	SSF103481	Multidrug resistance efflux transporter EmrE
Eco28_RS08800	SSF88713	Glycoside hydrolase/deacetylase
Eco28_RS08805	SSF50486	FMT C-terminal domain-like
Eco28_RS08805	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS08805	SSF53328	Formyltransferase
Eco28_RS08810	SSF53448	Nucleotide-diphospho-sugar transferases
Eco28_RS08815	SSF53383	PLP-dependent transferases
Eco28_RS08820	SSF53254	Phosphoglycerate mutase-like
Eco28_RS08825	SSF55811	Nudix
Eco28_RS08830	SSF56925	OMPA-like
Eco28_RS08835	SSF142433	CinA-like
Eco28_RS08835	SSF53218	Molybdenum cofactor biosynthesis proteins
Eco28_RS08840	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS08840	SSF55781	GAF domain-like
Eco28_RS08845	SSF51604	Enolase C-terminal domain-like
Eco28_RS08845	SSF54826	Enolase N-terminal domain-like
Eco28_RS08850	SSF103473	MFS general substrate transporter
Eco28_RS08855	SSF51621	Phosphoenolpyruvate/pyruvate domain
Eco28_RS08870	SSF46548	alpha-helical ferredoxin
Eco28_RS08875	SSF51905	FAD/NAD(P)-binding domain
Eco28_RS08880	SSF51905	FAD/NAD(P)-binding domain
Eco28_RS08885	SSF103473	MFS general substrate transporter
Eco28_RS08890	SSF51695	PLC-like phosphodiesterases
Eco28_RS08895	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS08895	SSF53850	Periplasmic binding protein-like II
Eco28_RS08900	SSF53098	Ribonuclease H-like
Eco28_RS08905	SSF103473	MFS general substrate transporter
Eco28_RS08910	SSF56112	Protein kinase-like (PK-like)
Eco28_RS08915	SSF54292	2Fe-2S ferredoxin-like
Eco28_RS08920	SSF47240	Ferritin-like
Eco28_RS08925	SSF48168	R1 subunit of ribonucleotide reductase, N-terminal domain
Eco28_RS08925	SSF51998	PFL-like glycyl radical enzymes
Eco28_RS08935	SSF103515	Autotransporter
Eco28_RS08935	SSF51126	Pectin lyase-like
Eco28_RS08940	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS08945	SSF101904	GyrA/ParC C-terminal domain-like
Eco28_RS08945	SSF56719	Type II DNA topoisomerase
Eco28_RS08960	SSF48239	Terpenoid cyclases/Protein prenyltransferases
Eco28_RS08965	SSF56601	beta-lactamase/transpeptidase-like
Eco28_RS08985	SSF100950	NagB/RpiA/CoA transferase-like
Eco28_RS08990	SSF100950	NagB/RpiA/CoA transferase-like
Eco28_RS08995	SSF46689	Homeodomain-like
Eco28_RS08995	SSF52172	CheY-like
Eco28_RS08995	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS09000	SSF47384	Homodimeric domain of signal transducing histidine kinase
Eco28_RS09000	SSF55785	PYP-like sensor domain (PAS domain)
Eco28_RS09000	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Eco28_RS09005	SSF47384	Homodimeric domain of signal transducing histidine kinase
Eco28_RS09005	SSF52172	CheY-like
Eco28_RS09005	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Eco28_RS09010	SSF46894	C-terminal effector domain of the bipartite response regulators
Eco28_RS09010	SSF52172	CheY-like
Eco28_RS09015	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
Eco28_RS09015	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Eco28_RS09030	SSF56935	Porins
Eco28_RS09035	SSF143631	ApbE-like
Eco28_RS09040	SSF46689	Homeodomain-like
Eco28_RS09040	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
Eco28_RS09040	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
Eco28_RS09040	SSF57884	Ada DNA repair protein, N-terminal domain (N-Ada 10)
Eco28_RS09045	SSF51197	Clavaminate synthase-like
Eco28_RS09050	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS09050	SSF90123	ABC transporter transmembrane region
Eco28_RS09055	SSF51905	FAD/NAD(P)-binding domain
Eco28_RS09060	SSF49772	Ecotin, trypsin inhibitor
Eco28_RS09070	SSF54862	4Fe-4S ferredoxins
Eco28_RS09080	SSF50692	ADC-like
Eco28_RS09080	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Eco28_RS09085	SSF54862	4Fe-4S ferredoxins
Eco28_RS09090	SSF54862	4Fe-4S ferredoxins
Eco28_RS09095	SSF48695	Multiheme cytochromes
Eco28_RS09100	SSF48695	Multiheme cytochromes
Eco28_RS09105	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS09125	SSF82093	Heme chaperone CcmE
Eco28_RS09135	SSF52833	Thioredoxin-like
Eco28_RS09140	SSF48452	TPR-like
Eco28_RS09145	SSF46894	C-terminal effector domain of the bipartite response regulators
Eco28_RS09145	SSF52172	CheY-like
Eco28_RS09155	SSF103515	Autotransporter
Eco28_RS09155	SSF51126	Pectin lyase-like
Eco28_RS09165	SSF53649	Alkaline phosphatase-like
Eco28_RS09170	SSF158651	YejL-like
Eco28_RS09180	SSF50715	Ribosomal protein L25-like
Eco28_RS09185	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS09185	SSF57829	Zn-binding ribosomal proteins
Eco28_RS09195	SSF55120	Pseudouridine synthase
Eco28_RS09195	SSF55174	Alpha-L RNA-binding motif
Eco28_RS09200	SSF103473	MFS general substrate transporter
Eco28_RS09215	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS09220	SSF161098	MetI-like
Eco28_RS09225	SSF161098	MetI-like
Eco28_RS09230	SSF53850	Periplasmic binding protein-like II
Eco28_RS09235	SSF141868	EAL domain-like
Eco28_RS09240	SSF54001	Cysteine proteinases
Eco28_RS09245	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
Eco28_RS09250	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS09255	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Eco28_RS09255	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS09260	SSF50104	Translation proteins SH3-like domain
Eco28_RS09260	SSF50249	Nucleic acid-binding proteins
Eco28_RS09270	SSF103473	MFS general substrate transporter
Eco28_RS09275	SSF55594	HPr-like
Eco28_RS09275	SSF55804	Phoshotransferase/anion transport protein
Eco28_RS09280	SSF53613	Ribokinase-like
Eco28_RS09285	SSF52794	PTS system IIB component-like
Eco28_RS09290	SSF53613	Ribokinase-like
Eco28_RS09295	SSF110581	Indigoidine synthase A-like
Eco28_RS09305	SSF51206	cAMP-binding domain-like
Eco28_RS09310	SSF53590	Nucleoside hydrolase
Eco28_RS09320	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS09320	SSF53613	Ribokinase-like
Eco28_RS09325	SSF51658	Xylose isomerase-like
Eco28_RS09335	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS09335	SSF53850	Periplasmic binding protein-like II
Eco28_RS09355	SSF56935	Porins
Eco28_RS09360	SSF53474	alpha/beta-Hydrolases
Eco28_RS09375	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
Eco28_RS09390	SSF47413	lambda repressor-like DNA-binding domains
Eco28_RS09390	SSF53822	Periplasmic binding protein-like I
Eco28_RS09395	SSF53822	Periplasmic binding protein-like I
Eco28_RS09400	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS09410	SSF51395	FMN-linked oxidoreductases
Eco28_RS09410	SSF54862	4Fe-4S ferredoxins
Eco28_RS09415	SSF46548	alpha-helical ferredoxin
Eco28_RS09415	SSF51971	Nucleotide-binding domain
Eco28_RS09430	SSF53927	Cytidine deaminase-like
Eco28_RS09445	SSF51395	FMN-linked oxidoreductases
Eco28_RS09465	SSF56954	Outer membrane efflux proteins (OEP)
Eco28_RS09470	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS09485	SSF56601	beta-lactamase/transpeptidase-like
Eco28_RS09490	SSF55103	FAD-linked oxidases, C-terminal domain
Eco28_RS09490	SSF56176	FAD-binding/transporter-associated domain-like
Eco28_RS09495	SSF51445	(Trans)glycosidases
Eco28_RS09495	SSF52279	Beta-D-glucan exohydrolase, C-terminal domain
Eco28_RS09500	SSF53850	Periplasmic binding protein-like II
Eco28_RS09505	SSF161098	MetI-like
Eco28_RS09510	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS09510	SSF54631	CBS-domain pair
Eco28_RS09515	SSF161098	MetI-like
Eco28_RS09525	SSF46955	Putative DNA-binding domain
Eco28_RS09530	SSF55781	GAF domain-like
Eco28_RS09530	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Eco28_RS09535	SSF52172	CheY-like
Eco28_RS09545	SSF160704	YehR-like
Eco28_RS09555	SSF53300	vWA-like
Eco28_RS09565	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS09580	SSF53098	Ribonuclease H-like
Eco28_RS09595	SSF142921	WGR domain-like
Eco28_RS09600	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Eco28_RS09600	SSF50249	Nucleic acid-binding proteins
Eco28_RS09600	SSF52374	Nucleotidylyl transferase
Eco28_RS09600	SSF57770	Methionyl-tRNA synthetase (MetRS), Zn-domain
Eco28_RS09605	SSF117916	Fe-S cluster assembly (FSCA) domain-like
Eco28_RS09605	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS09620	SSF49401	Bacterial adhesins
Eco28_RS09625	SSF49354	PapD-like
Eco28_RS09625	SSF49584	Periplasmic chaperone C-domain
Eco28_RS09630	SSF141729	FimD N-terminal domain-like
Eco28_RS09650	SSF49401	Bacterial adhesins
Eco28_RS09670	SSF53613	Ribokinase-like
Eco28_RS09675	SSF53613	Ribokinase-like
Eco28_RS09680	SSF51445	(Trans)glycosidases
Eco28_RS09685	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS09685	SSF64288	Chorismate lyase-like
Eco28_RS09690	SSF53613	Ribokinase-like
Eco28_RS09695	SSF101478	ADP-ribosylglycohydrolase
Eco28_RS09700	SSF103473	MFS general substrate transporter
Eco28_RS09705	SSF51569	Aldolase
Eco28_RS09710	SSF51569	Aldolase
Eco28_RS09715	SSF51569	Aldolase
Eco28_RS09720	SSF53098	Ribonuclease H-like
Eco28_RS09725	SSF51569	Aldolase
Eco28_RS09730	SSF55804	Phoshotransferase/anion transport protein
Eco28_RS09735	SSF52794	PTS system IIB component-like
Eco28_RS09745	SSF50129	GroES-like
Eco28_RS09745	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS09750	SSF100950	NagB/RpiA/CoA transferase-like
Eco28_RS09750	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS09755	SSF111331	NAD kinase/diacylglycerol kinase-like
Eco28_RS09780	SSF69279	Phage tail proteins
Eco28_RS09795	SSF160113	YegP-like
Eco28_RS09800	SSF46894	C-terminal effector domain of the bipartite response regulators
Eco28_RS09800	SSF52172	CheY-like
Eco28_RS09805	SSF158472	HAMP domain-like
Eco28_RS09805	SSF47384	Homodimeric domain of signal transducing histidine kinase
Eco28_RS09805	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Eco28_RS09810	SSF103473	MFS general substrate transporter
Eco28_RS09815	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Eco28_RS09815	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Eco28_RS09815	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Eco28_RS09820	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Eco28_RS09820	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Eco28_RS09820	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Eco28_RS09825	SSF111369	HlyD-like secretion proteins
Eco28_RS09830	SSF53300	vWA-like
Eco28_RS09835	SSF81606	PP2C-like
Eco28_RS09840	SSF56112	Protein kinase-like (PK-like)
Eco28_RS09845	SSF53067	Actin-like ATPase domain
Eco28_RS09855	SSF48150	DNA-glycosylase
Eco28_RS09855	SSF55945	TATA-box binding protein-like
Eco28_RS09860	SSF141868	EAL domain-like
Eco28_RS09860	SSF55073	Nucleotide cyclase
Eco28_RS09860	SSF55785	PYP-like sensor domain (PAS domain)
Eco28_RS09865	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS09870	SSF51283	dUTPase-like
Eco28_RS09880	SSF54631	CBS-domain pair
Eco28_RS09880	SSF56176	FAD-binding/transporter-associated domain-like
Eco28_RS09890	SSF52788	Phosphotyrosine protein phosphatases I
Eco28_RS09895	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS09900	SSF53448	Nucleotide-diphospho-sugar transferases
Eco28_RS09905	SSF51161	Trimeric LpxA-like enzymes
Eco28_RS09910	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Eco28_RS09920	SSF53448	Nucleotide-diphospho-sugar transferases
Eco28_RS09925	SSF51161	Trimeric LpxA-like enzymes
Eco28_RS09930	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS09935	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS09940	SSF55811	Nudix
Eco28_RS09945	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Eco28_RS09950	SSF51182	RmlC-like cupins
Eco28_RS09950	SSF53448	Nucleotide-diphospho-sugar transferases
Eco28_RS09955	SSF53738	Phosphoglucomutase, first 3 domains
Eco28_RS09955	SSF55957	Phosphoglucomutase, C-terminal domain
Eco28_RS09975	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Eco28_RS09980	SSF51126	Pectin lyase-like
Eco28_RS09985	SSF53448	Nucleotide-diphospho-sugar transferases
Eco28_RS09995	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS10000	SSF53448	Nucleotide-diphospho-sugar transferases
Eco28_RS10010	SSF53383	PLP-dependent transferases
Eco28_RS10020	SSF53383	PLP-dependent transferases
Eco28_RS10025	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Eco28_RS10030	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Eco28_RS10035	SSF53448	Nucleotide-diphospho-sugar transferases
Eco28_RS10045	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Eco28_RS10050	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS10055	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS10060	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Eco28_RS10065	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Eco28_RS10070	SSF51182	RmlC-like cupins
Eco28_RS10075	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Eco28_RS10075	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS10080	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Eco28_RS10080	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS10080	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
Eco28_RS10085	SSF160355	Bacterial polysaccharide co-polymerase-like
Eco28_RS10095	SSF101386	all-alpha NTP pyrophosphatases
Eco28_RS10095	SSF141734	HisI-like
Eco28_RS10100	SSF51366	Ribulose-phoshate binding barrel
Eco28_RS10105	SSF51366	Ribulose-phoshate binding barrel
Eco28_RS10110	SSF52317	Class I glutamine amidotransferase-like
Eco28_RS10115	SSF54211	Ribosomal protein S5 domain 2-like
Eco28_RS10115	SSF56784	HAD-like
Eco28_RS10120	SSF53383	PLP-dependent transferases
Eco28_RS10125	SSF53720	ALDH-like
Eco28_RS10130	SSF53850	Periplasmic binding protein-like II
Eco28_RS10130	SSF54913	GlnB-like
Eco28_RS10145	SSF143120	YefM-like
Eco28_RS10150	SSF143011	RelE-like
Eco28_RS10155	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS10160	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS10160	SSF53850	Periplasmic binding protein-like II
Eco28_RS10175	SSF64307	SirA-like
Eco28_RS10180	SSF53098	Ribonuclease H-like
Eco28_RS10185	SSF56601	beta-lactamase/transpeptidase-like
Eco28_RS10185	SSF69189	Penicillin-binding protein associated domain
Eco28_RS10190	SSF55136	Probable bacterial effector-binding domain
Eco28_RS10205	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS10225	SSF143737	YeeU-like
Eco28_RS10235	SSF102712	JAB1/MPN domain
Eco28_RS10260	SSF89872	Inhibitor of vertebrate lysozyme, Ivy
Eco28_RS10265	SSF52151	FabD/lysophospholipase-like
Eco28_RS10275	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS10295	SSF46689	Homeodomain-like
Eco28_RS10320	SSF53098	Ribonuclease H-like
Eco28_RS10330	SSF53098	Ribonuclease H-like
Eco28_RS10350	SSF46689	Homeodomain-like
Eco28_RS10350	SSF53098	Ribonuclease H-like
Eco28_RS10355	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS10420	SSF51556	Metallo-dependent hydrolases
Eco28_RS10430	SSF52317	Class I glutamine amidotransferase-like
Eco28_RS10455	SSF56935	Porins
Eco28_RS10485	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS10495	SSF52733	Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
Eco28_RS10500	SSF141523	L,D-transpeptidase catalytic domain-like
Eco28_RS10510	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS10510	SSF53850	Periplasmic binding protein-like II
Eco28_RS10515	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS10515	SSF53850	Periplasmic binding protein-like II
Eco28_RS10540	SSF75625	YebC-like
Eco28_RS10545	SSF53167	Purine and uridine phosphorylases
Eco28_RS10550	SSF103473	MFS general substrate transporter
Eco28_RS10575	SSF55486	Metalloproteases ("zincins"), catalytic domain
Eco28_RS10590	SSF81342	Transmembrane di-heme cytochromes
Eco28_RS10595	SSF50814	Lipocalins
Eco28_RS10610	SSF50814	Lipocalins
Eco28_RS10620	SSF56524	Oxidoreductase molybdopterin-binding domain
Eco28_RS10625	SSF49472	Transthyretin (synonym: prealbumin)
Eco28_RS10630	SSF46894	C-terminal effector domain of the bipartite response regulators
Eco28_RS10630	SSF52172	CheY-like
Eco28_RS10635	SSF47384	Homodimeric domain of signal transducing histidine kinase
Eco28_RS10635	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Eco28_RS10640	SSF52317	Class I glutamine amidotransferase-like
Eco28_RS10650	SSF109604	HD-domain/PDEase-like
Eco28_RS10655	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS10660	SSF52980	Restriction endonuclease-like
Eco28_RS10665	SSF103481	Multidrug resistance efflux transporter EmrE
Eco28_RS10685	SSF55073	Nucleotide cyclase
Eco28_RS10690	SSF56784	HAD-like
Eco28_RS10710	SSF46894	C-terminal effector domain of the bipartite response regulators
Eco28_RS10735	SSF101801	Surface presentation of antigens (SPOA)
Eco28_RS10740	SSF101801	Surface presentation of antigens (SPOA)
Eco28_RS10740	SSF103039	CheC-like
Eco28_RS10760	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS10770	SSF48029	FliG
Eco28_RS10790	SSF52058	L domain-like
Eco28_RS10800	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Eco28_RS10805	SSF143081	BB1717-like
Eco28_RS10810	SSF64307	SirA-like
Eco28_RS10830	SSF51011	Glycosyl hydrolase domain
Eco28_RS10830	SSF51445	(Trans)glycosidases
Eco28_RS10840	SSF101116	Flagellar export chaperone FliS
Eco28_RS10855	SSF64518	Phase 1 flagellin
Eco28_RS10860	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Eco28_RS10860	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Eco28_RS10870	SSF53850	Periplasmic binding protein-like II
Eco28_RS10875	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Eco28_RS10880	SSF161098	MetI-like
Eco28_RS10885	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS10890	SSF46894	C-terminal effector domain of the bipartite response regulators
Eco28_RS10890	SSF75516	Pheromone-binding domain of LuxR-like quorum-sensing transcription factors
Eco28_RS10900	SSF46894	C-terminal effector domain of the bipartite response regulators
Eco28_RS10900	SSF52172	CheY-like
Eco28_RS10905	SSF46600	C-terminal UvrC-binding domain of UvrB
Eco28_RS10905	SSF47781	RuvA domain 2-like
Eco28_RS10905	SSF82771	GIY-YIG endonuclease
Eco28_RS10930	SSF101327	YgfB-like
Eco28_RS10930	SSF103642	Sec-C motif
Eco28_RS10945	SSF47240	Ferritin-like
Eco28_RS10965	SSF47240	Ferritin-like
Eco28_RS10975	SSF53822	Periplasmic binding protein-like I
Eco28_RS10980	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS10990	SSF56784	HAD-like
Eco28_RS10995	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Eco28_RS11000	SSF52402	Adenine nucleotide alpha hydrolases-like
Eco28_RS11005	SSF63592	Flagellar transcriptional activator FlhD
Eco28_RS11010	SSF160930	FlhC-like
Eco28_RS11020	SSF103088	OmpA-like
Eco28_RS11025	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
Eco28_RS11025	SSF47384	Homodimeric domain of signal transducing histidine kinase
Eco28_RS11025	SSF50341	CheW-like
Eco28_RS11025	SSF55052	CheY-binding domain of CheA
Eco28_RS11025	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Eco28_RS11030	SSF50341	CheW-like
Eco28_RS11035	SSF47170	Aspartate receptor, ligand-binding domain
Eco28_RS11035	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Eco28_RS11040	SSF47170	Aspartate receptor, ligand-binding domain
Eco28_RS11040	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Eco28_RS11045	SSF47757	Chemotaxis receptor methyltransferase CheR, N-terminal domain
Eco28_RS11045	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS11050	SSF52172	CheY-like
Eco28_RS11050	SSF52738	Methylesterase CheB, C-terminal domain
Eco28_RS11055	SSF52172	CheY-like
Eco28_RS11060	SSF75708	Chemotaxis phosphatase CheZ
Eco28_RS11065	SSF160544	EscU C-terminal domain-like
Eco28_RS11085	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Eco28_RS11085	SSF52374	Nucleotidylyl transferase
Eco28_RS11085	SSF55190	Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
Eco28_RS11095	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Eco28_RS11100	SSF110395	CutC-like
Eco28_RS11105	SSF48695	Multiheme cytochromes
Eco28_RS11110	SSF50692	ADC-like
Eco28_RS11110	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Eco28_RS11115	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS11120	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS11125	SSF161084	MAPEG domain-like
Eco28_RS11130	SSF117396	TM1631-like
Eco28_RS11135	SSF52499	Isochorismatase-like hydrolases
Eco28_RS11140	SSF50249	Nucleic acid-binding proteins
Eco28_RS11140	SSF55261	GAD domain-like
Eco28_RS11140	SSF55681	Class II aaRS and biotin synthetases
Eco28_RS11145	SSF55811	Nudix
Eco28_RS11150	SSF75625	YebC-like
Eco28_RS11155	SSF53098	Ribonuclease H-like
Eco28_RS11160	SSF54001	Cysteine proteinases
Eco28_RS11170	SSF46929	DNA helicase RuvA subunit, C-terminal domain
Eco28_RS11170	SSF47781	RuvA domain 2-like
Eco28_RS11170	SSF50249	Nucleic acid-binding proteins
Eco28_RS11175	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS11175	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS11180	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Eco28_RS11185	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS11190	SSF53807	"Helical backbone" metal receptor
Eco28_RS11195	SSF51261	Duplicated hybrid motif
Eco28_RS11195	SSF54106	LysM domain
Eco28_RS11205	SSF50800	PK beta-barrel domain-like
Eco28_RS11205	SSF51621	Phosphoenolpyruvate/pyruvate domain
Eco28_RS11205	SSF52935	PK C-terminal domain-like
Eco28_RS11210	SSF46689	Homeodomain-like
Eco28_RS11210	SSF53697	SIS domain
Eco28_RS11215	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS11215	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Eco28_RS11220	SSF143975	IlvD/EDD N-terminal domain-like
Eco28_RS11220	SSF52016	LeuD/IlvD-like
Eco28_RS11225	SSF51569	Aldolase
Eco28_RS11230	SSF51246	Rudiment single hybrid motif
Eco28_RS11230	SSF52440	PreATP-grasp domain
Eco28_RS11230	SSF56059	Glutathione synthetase ATP-binding domain-like
Eco28_RS11245	SSF158682	TerB-like
Eco28_RS11260	SSF53098	Ribonuclease H-like
Eco28_RS11265	SSF56317	Carbon-nitrogen hydrolase
Eco28_RS11270	SSF46575	DNA polymerase III theta subunit-like
Eco28_RS11275	SSF81296	E set domains
Eco28_RS11290	SSF56300	Metallo-dependent phosphatases
Eco28_RS11305	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS11320	SSF55781	GAF domain-like
Eco28_RS11325	SSF48657	FinO-like
Eco28_RS11330	SSF50156	PDZ domain-like
Eco28_RS11330	SSF52096	ClpP/crotonase
Eco28_RS11340	SSF103473	MFS general substrate transporter
Eco28_RS11345	SSF103473	MFS general substrate transporter
Eco28_RS11350	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS11350	SSF55781	GAF domain-like
Eco28_RS11380	SSF50249	Nucleic acid-binding proteins
Eco28_RS11385	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS11415	SSF52728	PTS IIb component
Eco28_RS11415	SSF53062	PTS system fructose IIA component-like
Eco28_RS11430	SSF54631	CBS-domain pair
Eco28_RS11430	SSF56176	FAD-binding/transporter-associated domain-like
Eco28_RS11435	SSF141868	EAL domain-like
Eco28_RS11440	SSF143548	Serine metabolism enzymes domain
Eco28_RS11445	SSF55811	Nudix
Eco28_RS11450	SSF56322	ADC synthase
Eco28_RS11460	SSF140670	YoaC-like
Eco28_RS11465	SSF55298	YjgF-like
Eco28_RS11470	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS11475	SSF53067	Actin-like ATPase domain
Eco28_RS11485	SSF56801	Acetyl-CoA synthetase-like
Eco28_RS11490	SSF47819	HRDC-like
Eco28_RS11490	SSF53098	Ribonuclease H-like
Eco28_RS11495	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
Eco28_RS11495	SSF54292	2Fe-2S ferredoxin-like
Eco28_RS11495	SSF63380	Riboflavin synthase domain-like
Eco28_RS11500	SSF50022	ISP domain
Eco28_RS11500	SSF55961	Bet v1-like
Eco28_RS11510	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
Eco28_RS11515	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS11515	SSF53850	Periplasmic binding protein-like II
Eco28_RS11525	SSF51197	Clavaminate synthase-like
Eco28_RS11530	SSF103063	Hypothetical protein YoaG
Eco28_RS11550	SSF55073	Nucleotide cyclase
Eco28_RS11550	SSF55781	GAF domain-like
Eco28_RS11565	SSF103473	MFS general substrate transporter
Eco28_RS11570	SSF46689	Homeodomain-like
Eco28_RS11570	SSF51182	RmlC-like cupins
Eco28_RS11585	SSF55826	YbaK/ProRS associated domain
Eco28_RS11590	SSF55073	Nucleotide cyclase
Eco28_RS11595	SSF55073	Nucleotide cyclase
Eco28_RS11605	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS11615	SSF51430	NAD(P)-linked oxidoreductase
Eco28_RS11620	SSF74650	Galactose mutarotase-like
Eco28_RS11625	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS11625	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Eco28_RS11630	SSF51316	Mss4-like
Eco28_RS11640	SSF50129	GroES-like
Eco28_RS11640	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS11645	SSF103473	MFS general substrate transporter
Eco28_RS11650	SSF50129	GroES-like
Eco28_RS11650	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS11655	SSF51569	Aldolase
Eco28_RS11660	SSF53613	Ribokinase-like
Eco28_RS11665	SSF51430	NAD(P)-linked oxidoreductase
Eco28_RS11670	SSF100950	NagB/RpiA/CoA transferase-like
Eco28_RS11670	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS11680	SSF103473	MFS general substrate transporter
Eco28_RS11685	SSF52499	Isochorismatase-like hydrolases
Eco28_RS11690	SSF53774	Glutaminase/Asparaginase
Eco28_RS11695	SSF52096	ClpP/crotonase
Eco28_RS11705	SSF55469	FMN-dependent nitroreductase-like
Eco28_RS11715	SSF55326	PurM N-terminal domain-like
Eco28_RS11715	SSF56042	PurM C-terminal domain-like
Eco28_RS11720	SSF56712	Prokaryotic type I DNA topoisomerase
Eco28_RS11730	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS11730	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
Eco28_RS11740	SSF55811	Nudix
Eco28_RS11750	SSF52821	Rhodanese/Cell cycle control phosphatase
Eco28_RS11755	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS11760	SSF161098	MetI-like
Eco28_RS11765	SSF53850	Periplasmic binding protein-like II
Eco28_RS11770	SSF69118	AhpD-like
Eco28_RS11790	SSF56219	DNase I-like
Eco28_RS11795	SSF53383	PLP-dependent transferases
Eco28_RS11800	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Eco28_RS11805	SSF53720	ALDH-like
Eco28_RS11810	SSF55909	Pentein
Eco28_RS11815	SSF53187	Zn-dependent exopeptidases
Eco28_RS11825	SSF51182	RmlC-like cupins
Eco28_RS11830	SSF82771	GIY-YIG endonuclease
Eco28_RS11835	SSF52402	Adenine nucleotide alpha hydrolases-like
Eco28_RS11850	SSF52794	PTS system IIB component-like
Eco28_RS11860	SSF46973	Enzyme IIa from lactose specific PTS, IIa-lac
Eco28_RS11865	SSF46689	Homeodomain-like
Eco28_RS11865	SSF51182	RmlC-like cupins
Eco28_RS11870	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS11870	SSF56327	LDH C-terminal domain-like
Eco28_RS11875	SSF88713	Glycoside hydrolase/deacetylase
Eco28_RS11880	SSF52317	Class I glutamine amidotransferase-like
Eco28_RS11880	SSF56634	Heme-dependent catalase-like
Eco28_RS11895	SSF118215	Proton glutamate symport protein
Eco28_RS11905	SSF56784	HAD-like
Eco28_RS11915	SSF56112	Protein kinase-like (PK-like)
Eco28_RS11925	SSF53613	Ribokinase-like
Eco28_RS11940	SSF48403	Ankyrin repeat
Eco28_RS11945	SSF52954	Class II aaRS ABD-related
Eco28_RS11945	SSF55186	ThrRS/AlaRS common domain
Eco28_RS11945	SSF55681	Class II aaRS and biotin synthetases
Eco28_RS11945	SSF81271	TGS-like
Eco28_RS11950	SSF54364	Translation initiation factor IF3, N-terminal domain
Eco28_RS11950	SSF55200	Translation initiation factor IF3, C-terminal domain
Eco28_RS11955	SSF143034	L35p-like
Eco28_RS11960	SSF74731	Ribosomal protein L20
Eco28_RS11965	SSF46589	tRNA-binding arm
Eco28_RS11965	SSF55681	Class II aaRS and biotin synthetases
Eco28_RS11970	SSF46955	Putative DNA-binding domain
Eco28_RS11970	SSF50249	Nucleic acid-binding proteins
Eco28_RS11970	SSF54991	Anticodon-binding domain of PheRS
Eco28_RS11970	SSF55681	Class II aaRS and biotin synthetases
Eco28_RS11970	SSF56037	PheT/TilS domain
Eco28_RS11975	SSF47729	IHF-like DNA-binding proteins
Eco28_RS11980	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Eco28_RS11985	SSF52833	Thioredoxin-like
Eco28_RS11990	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS11995	SSF54001	Cysteine proteinases
Eco28_RS12000	SSF141868	EAL domain-like
Eco28_RS12015	SSF51569	Aldolase
Eco28_RS12030	SSF51621	Phosphoenolpyruvate/pyruvate domain
Eco28_RS12030	SSF52009	Phosphohistidine domain
Eco28_RS12030	SSF56059	Glutathione synthetase ATP-binding domain-like
Eco28_RS12040	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS12040	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
Eco28_RS12050	SSF51197	Clavaminate synthase-like
Eco28_RS12055	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS12060	SSF56801	Acetyl-CoA synthetase-like
Eco28_RS12065	SSF54862	4Fe-4S ferredoxins
Eco28_RS12070	SSF51905	FAD/NAD(P)-binding domain
Eco28_RS12070	SSF54373	FAD-linked reductases, C-terminal domain
Eco28_RS12075	SSF52402	Adenine nucleotide alpha hydrolases-like
Eco28_RS12075	SSF52467	DHS-like NAD/FAD-binding domain
Eco28_RS12080	SSF52402	Adenine nucleotide alpha hydrolases-like
Eco28_RS12090	SSF46689	Homeodomain-like
Eco28_RS12090	SSF51182	RmlC-like cupins
Eco28_RS12095	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Eco28_RS12095	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Eco28_RS12100	SSF100950	NagB/RpiA/CoA transferase-like
Eco28_RS12105	SSF51569	Aldolase
Eco28_RS12110	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS12110	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
Eco28_RS12115	SSF103473	MFS general substrate transporter
Eco28_RS12120	SSF53098	Ribonuclease H-like
Eco28_RS12130	SSF103473	MFS general substrate transporter
Eco28_RS12135	SSF47413	lambda repressor-like DNA-binding domains
Eco28_RS12140	SSF53098	Ribonuclease H-like
Eco28_RS12145	SSF47413	lambda repressor-like DNA-binding domains
Eco28_RS12160	SSF46548	alpha-helical ferredoxin
Eco28_RS12160	SSF55103	FAD-linked oxidases, C-terminal domain
Eco28_RS12160	SSF56176	FAD-binding/transporter-associated domain-like
Eco28_RS12165	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Eco28_RS12175	SSF89360	HesB-like domain
Eco28_RS12180	SSF101960	Stabilizer of iron transporter SufD
Eco28_RS12185	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS12190	SSF101960	Stabilizer of iron transporter SufD
Eco28_RS12195	SSF53383	PLP-dependent transferases
Eco28_RS12200	SSF82649	SufE/NifU
Eco28_RS12205	SSF141523	L,D-transpeptidase catalytic domain-like
Eco28_RS12210	SSF58042	Outer membrane lipoprotein
Eco28_RS12215	SSF50800	PK beta-barrel domain-like
Eco28_RS12215	SSF51621	Phosphoenolpyruvate/pyruvate domain
Eco28_RS12215	SSF52935	PK C-terminal domain-like
Eco28_RS12225	SSF54862	4Fe-4S ferredoxins
Eco28_RS12230	SSF48310	Aldehyde ferredoxin oxidoreductase, C-terminal domains
Eco28_RS12230	SSF56228	Aldehyde ferredoxin oxidoreductase, N-terminal domain
Eco28_RS12240	SSF54862	4Fe-4S ferredoxins
Eco28_RS12245	SSF81342	Transmembrane di-heme cytochromes
Eco28_RS12255	SSF51905	FAD/NAD(P)-binding domain
Eco28_RS12260	SSF54909	Dimeric alpha+beta barrel
Eco28_RS12275	SSF51126	Pectin lyase-like
Eco28_RS12285	SSF63380	Riboflavin synthase domain-like
Eco28_RS12290	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS12295	SSF103473	MFS general substrate transporter
Eco28_RS12300	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS12300	SSF53850	Periplasmic binding protein-like II
Eco28_RS12305	SSF47413	lambda repressor-like DNA-binding domains
Eco28_RS12305	SSF53822	Periplasmic binding protein-like I
Eco28_RS12320	SSF103473	MFS general substrate transporter
Eco28_RS12325	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
Eco28_RS12325	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
Eco28_RS12330	SSF54001	Cysteine proteinases
Eco28_RS12335	SSF52833	Thioredoxin-like
Eco28_RS12340	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS12345	SSF53098	Ribonuclease H-like
Eco28_RS12350	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Eco28_RS12355	SSF51395	FMN-linked oxidoreductases
Eco28_RS12360	SSF46689	Homeodomain-like
Eco28_RS12360	SSF48498	Tetracyclin repressor-like, C-terminal domain
Eco28_RS12370	SSF51430	NAD(P)-linked oxidoreductase
Eco28_RS12375	SSF49329	Cu,Zn superoxide dismutase-like
Eco28_RS12385	SSF111369	HlyD-like secretion proteins
Eco28_RS12395	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS12405	SSF53067	Actin-like ATPase domain
Eco28_RS12410	SSF141488	YdhA-like
Eco28_RS12415	SSF50475	FMN-binding split barrel
Eco28_RS12420	SSF52374	Nucleotidylyl transferase
Eco28_RS12420	SSF55174	Alpha-L RNA-binding motif
Eco28_RS12425	SSF53613	Ribokinase-like
Eco28_RS12430	SSF47616	GST C-terminal domain-like
Eco28_RS12430	SSF52833	Thioredoxin-like
Eco28_RS12435	SSF103473	MFS general substrate transporter
Eco28_RS12445	SSF48150	DNA-glycosylase
Eco28_RS12470	SSF53098	Ribonuclease H-like
Eco28_RS12475	SSF142019	Nqo1 FMN-binding domain-like
Eco28_RS12475	SSF46548	alpha-helical ferredoxin
Eco28_RS12480	SSF54862	4Fe-4S ferredoxins
Eco28_RS12495	SSF68989	Hemolysin expression modulating protein HHA
Eco28_RS12510	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS12515	SSF51556	Metallo-dependent hydrolases
Eco28_RS12520	SSF53383	PLP-dependent transferases
Eco28_RS12525	SSF55604	Glucose permease domain IIB
Eco28_RS12530	SSF47413	lambda repressor-like DNA-binding domains
Eco28_RS12530	SSF53822	Periplasmic binding protein-like I
Eco28_RS12535	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS12540	SSF46689	Homeodomain-like
Eco28_RS12540	SSF48498	Tetracyclin repressor-like, C-terminal domain
Eco28_RS12545	SSF49303	beta-Galactosidase/glucuronidase domain
Eco28_RS12545	SSF49785	Galactose-binding domain-like
Eco28_RS12545	SSF51445	(Trans)glycosidases
Eco28_RS12550	SSF103473	MFS general substrate transporter
Eco28_RS12565	SSF51182	RmlC-like cupins
Eco28_RS12570	SSF117457	FumA C-terminal domain-like
Eco28_RS12575	SSF48557	L-aspartase-like
Eco28_RS12580	SSF56596	Replication terminator protein (Tus)
Eco28_RS12585	SSF47384	Homodimeric domain of signal transducing histidine kinase
Eco28_RS12585	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Eco28_RS12590	SSF46894	C-terminal effector domain of the bipartite response regulators
Eco28_RS12590	SSF52172	CheY-like
Eco28_RS12600	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS12615	SSF159871	YdgH-like
Eco28_RS12620	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS12620	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
Eco28_RS12625	SSF52467	DHS-like NAD/FAD-binding domain
Eco28_RS12635	SSF103481	Multidrug resistance efflux transporter EmrE
Eco28_RS12640	SSF103481	Multidrug resistance efflux transporter EmrE
Eco28_RS12645	SSF50494	Trypsin-like serine proteases
Eco28_RS12665	SSF103473	MFS general substrate transporter
Eco28_RS12670	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS12670	SSF53850	Periplasmic binding protein-like II
Eco28_RS12675	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS12675	SSF53067	Actin-like ATPase domain
Eco28_RS12680	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS12685	SSF81340	Clc chloride channel
Eco28_RS12690	SSF89155	TorD-like
Eco28_RS12700	SSF54862	4Fe-4S ferredoxins
Eco28_RS12705	SSF50692	ADC-like
Eco28_RS12705	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Eco28_RS12710	SSF50692	ADC-like
Eco28_RS12710	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Eco28_RS12725	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Eco28_RS12735	SSF103481	Multidrug resistance efflux transporter EmrE
Eco28_RS12745	SSF51604	Enolase C-terminal domain-like
Eco28_RS12745	SSF54826	Enolase N-terminal domain-like
Eco28_RS12750	SSF50129	GroES-like
Eco28_RS12750	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS12760	SSF56349	DNA breaking-rejoining enzymes
Eco28_RS12770	SSF53098	Ribonuclease H-like
Eco28_RS12795	SSF47413	lambda repressor-like DNA-binding domains
Eco28_RS12800	SSF47413	lambda repressor-like DNA-binding domains
Eco28_RS12820	SSF46689	Homeodomain-like
Eco28_RS12820	SSF53098	Ribonuclease H-like
Eco28_RS12840	SSF143011	RelE-like
Eco28_RS12865	SSF57938	DnaJ/Hsp40 cysteine-rich domain
Eco28_RS12870	SSF50249	Nucleic acid-binding proteins
Eco28_RS12875	SSF50249	Nucleic acid-binding proteins
Eco28_RS12890	SSF53955	Lysozyme-like
Eco28_RS12900	SSF50249	Nucleic acid-binding proteins
Eco28_RS12920	SSF160419	YdfO-like
Eco28_RS12930	SSF46955	Putative DNA-binding domain
Eco28_RS12940	SSF64210	Head-to-tail joining protein W, gpW
Eco28_RS12950	SSF52096	ClpP/crotonase
Eco28_RS12955	SSF51274	Head decoration protein D (gpD, major capsid protein D)
Eco28_RS12965	SSF56349	DNA breaking-rejoining enzymes
Eco28_RS13000	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS13000	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS13010	SSF50249	Nucleic acid-binding proteins
Eco28_RS13020	SSF51274	Head decoration protein D (gpD, major capsid protein D)
Eco28_RS13035	SSF52200	Toll/Interleukin receptor TIR domain
Eco28_RS13050	SSF69279	Phage tail proteins
Eco28_RS13060	SSF143749	Phage tail protein-like
Eco28_RS13065	SSF49373	Invasin/intimin cell-adhesion fragments
Eco28_RS13095	SSF102712	JAB1/MPN domain
Eco28_RS13095	SSF54001	Cysteine proteinases
Eco28_RS13105	SSF49265	Fibronectin type III
Eco28_RS13110	SSF56925	OMPA-like
Eco28_RS13115	SSF49464	Carboxypeptidase regulatory domain-like
Eco28_RS13115	SSF88874	Receptor-binding domain of short tail fibre protein gp12
Eco28_RS13125	SSF46689	Homeodomain-like
Eco28_RS13125	SSF53041	Resolvase-like
Eco28_RS13130	SSF55785	PYP-like sensor domain (PAS domain)
Eco28_RS13130	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Eco28_RS13135	SSF88874	Receptor-binding domain of short tail fibre protein gp12
Eco28_RS13145	SSF46689	Homeodomain-like
Eco28_RS13145	SSF53041	Resolvase-like
Eco28_RS13160	SSF103473	MFS general substrate transporter
Eco28_RS13165	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Eco28_RS13165	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS13175	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS13175	SSF48008	GntR ligand-binding domain-like
Eco28_RS13180	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS13190	SSF55486	Metalloproteases ("zincins"), catalytic domain
Eco28_RS13205	SSF101756	Hypothetical protein YgiW
Eco28_RS13210	SSF55073	Nucleotide cyclase
Eco28_RS13220	SSF103473	MFS general substrate transporter
Eco28_RS13225	SSF103481	Multidrug resistance efflux transporter EmrE
Eco28_RS13230	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS13230	SSF64288	Chorismate lyase-like
Eco28_RS13235	SSF52794	PTS system IIB component-like
Eco28_RS13245	SSF46973	Enzyme IIa from lactose specific PTS, IIa-lac
Eco28_RS13250	SSF56935	Porins
Eco28_RS13255	SSF51445	(Trans)glycosidases
Eco28_RS13265	SSF46689	Homeodomain-like
Eco28_RS13270	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS13280	SSF103473	MFS general substrate transporter
Eco28_RS13295	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS13295	SSF53850	Periplasmic binding protein-like II
Eco28_RS13300	SSF53720	ALDH-like
Eco28_RS13305	SSF56601	beta-lactamase/transpeptidase-like
Eco28_RS13320	SSF55073	Nucleotide cyclase
Eco28_RS13330	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Eco28_RS13330	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS13345	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS13350	SSF54909	Dimeric alpha+beta barrel
Eco28_RS13355	SSF51569	Aldolase
Eco28_RS13360	SSF53822	Periplasmic binding protein-like I
Eco28_RS13375	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS13380	SSF100950	NagB/RpiA/CoA transferase-like
Eco28_RS13385	SSF53067	Actin-like ATPase domain
Eco28_RS13390	SSF103515	Autotransporter
Eco28_RS13390	SSF51126	Pectin lyase-like
Eco28_RS13395	SSF47413	lambda repressor-like DNA-binding domains
Eco28_RS13405	SSF46689	Homeodomain-like
Eco28_RS13410	SSF49401	Bacterial adhesins
Eco28_RS13420	SSF49354	PapD-like
Eco28_RS13420	SSF49584	Periplasmic chaperone C-domain
Eco28_RS13425	SSF141729	FimD N-terminal domain-like
Eco28_RS13430	SSF49401	Bacterial adhesins
Eco28_RS13435	SSF49401	Bacterial adhesins
Eco28_RS13440	SSF49401	Bacterial adhesins
Eco28_RS13445	SSF50692	ADC-like
Eco28_RS13445	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Eco28_RS13455	SSF46689	Homeodomain-like
Eco28_RS13460	SSF53649	Alkaline phosphatase-like
Eco28_RS13465	SSF102114	Radical SAM enzymes
Eco28_RS13470	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS13470	SSF90123	ABC transporter transmembrane region
Eco28_RS13475	SSF56935	Porins
Eco28_RS13480	SSF63411	LuxS/MPP-like metallohydrolase
Eco28_RS13490	SSF53383	PLP-dependent transferases
Eco28_RS13500	SSF51445	(Trans)glycosidases
Eco28_RS13505	SSF46458	Globin-like
Eco28_RS13505	SSF55073	Nucleotide cyclase
Eco28_RS13510	SSF141868	EAL domain-like
Eco28_RS13510	SSF55073	Nucleotide cyclase
Eco28_RS13510	SSF55785	PYP-like sensor domain (PAS domain)
Eco28_RS13515	SSF55166	Hedgehog/DD-peptidase
Eco28_RS13520	SSF53850	Periplasmic binding protein-like II
Eco28_RS13525	SSF161098	MetI-like
Eco28_RS13530	SSF161098	MetI-like
Eco28_RS13535	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS13540	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS13545	SSF82784	OsmC-like
Eco28_RS13565	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS13565	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
Eco28_RS13570	SSF50129	GroES-like
Eco28_RS13570	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS13575	SSF47413	lambda repressor-like DNA-binding domains
Eco28_RS13580	SSF81342	Transmembrane di-heme cytochromes
Eco28_RS13585	SSF54862	4Fe-4S ferredoxins
Eco28_RS13595	SSF103481	Multidrug resistance efflux transporter EmrE
Eco28_RS13600	SSF56935	Porins
Eco28_RS13605	SSF52058	L domain-like
Eco28_RS13610	SSF52058	L domain-like
Eco28_RS13615	SSF52058	L domain-like
Eco28_RS13620	SSF103473	MFS general substrate transporter
Eco28_RS13625	SSF50692	ADC-like
Eco28_RS13625	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Eco28_RS13630	SSF54862	4Fe-4S ferredoxins
Eco28_RS13635	SSF89155	TorD-like
Eco28_RS13640	SSF103501	Respiratory nitrate reductase 1 gamma chain
Eco28_RS13645	SSF54506	Diaminopimelate epimerase-like
Eco28_RS13650	SSF54001	Cysteine proteinases
Eco28_RS13655	SSF50475	FMN-binding split barrel
Eco28_RS13660	SSF55331	Tautomerase/MIF
Eco28_RS13690	SSF69255	gp5 N-terminal domain-like
Eco28_RS13690	SSF69279	Phage tail proteins
Eco28_RS13690	SSF69349	Phage fibre proteins
Eco28_RS13710	SSF51004	C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
Eco28_RS13725	SSF56935	Porins
Eco28_RS13730	SSF53098	Ribonuclease H-like
Eco28_RS13740	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS13740	SSF48008	GntR ligand-binding domain-like
Eco28_RS13745	SSF50129	GroES-like
Eco28_RS13745	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS13755	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Eco28_RS13785	SSF53720	ALDH-like
Eco28_RS13790	SSF161098	MetI-like
Eco28_RS13795	SSF161098	MetI-like
Eco28_RS13800	SSF50331	MOP-like
Eco28_RS13800	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS13805	SSF53850	Periplasmic binding protein-like II
Eco28_RS13810	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS13810	SSF53383	PLP-dependent transferases
Eco28_RS13815	SSF143100	TTHA1013/TTHA0281-like
Eco28_RS13815	SSF47413	lambda repressor-like DNA-binding domains
Eco28_RS13820	SSF54786	YcfA/nrd intein domain
Eco28_RS13835	SSF47413	lambda repressor-like DNA-binding domains
Eco28_RS13835	SSF51182	RmlC-like cupins
Eco28_RS13860	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS13870	SSF51161	Trimeric LpxA-like enzymes
Eco28_RS13875	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Eco28_RS13890	SSF74650	Galactose mutarotase-like
Eco28_RS13890	SSF81296	E set domains
Eco28_RS13905	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS13905	SSF53850	Periplasmic binding protein-like II
Eco28_RS13910	SSF47170	Aspartate receptor, ligand-binding domain
Eco28_RS13910	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Eco28_RS13925	SSF81342	Transmembrane di-heme cytochromes
Eco28_RS13930	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS13930	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Eco28_RS13935	SSF53720	ALDH-like
Eco28_RS13965	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS13970	SSF52218	Flavoproteins
Eco28_RS13975	SSF52799	(Phosphotyrosine protein) phosphatases II
Eco28_RS13980	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS13980	SSF53474	alpha/beta-Hydrolases
Eco28_RS14000	SSF51430	NAD(P)-linked oxidoreductase
Eco28_RS14005	SSF103515	Autotransporter
Eco28_RS14030	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS14030	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
Eco28_RS14045	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Eco28_RS14045	SSF52922	TK C-terminal domain-like
Eco28_RS14045	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
Eco28_RS14045	SSF54862	4Fe-4S ferredoxins
Eco28_RS14055	SSF56935	Porins
Eco28_RS14060	SSF52402	Adenine nucleotide alpha hydrolases-like
Eco28_RS14070	SSF46689	Homeodomain-like
Eco28_RS14070	SSF53041	Resolvase-like
Eco28_RS14080	SSF49464	Carboxypeptidase regulatory domain-like
Eco28_RS14080	SSF88874	Receptor-binding domain of short tail fibre protein gp12
Eco28_RS14085	SSF56925	OMPA-like
Eco28_RS14095	SSF143422	Transposase IS200-like
Eco28_RS14105	SSF49265	Fibronectin type III
Eco28_RS14115	SSF102712	JAB1/MPN domain
Eco28_RS14115	SSF54001	Cysteine proteinases
Eco28_RS14210	SSF110849	ParB/Sulfiredoxin
Eco28_RS14230	SSF53955	Lysozyme-like
Eco28_RS14245	SSF74653	TolA/TonB C-terminal domain
Eco28_RS14250	SSF74653	TolA/TonB C-terminal domain
Eco28_RS14275	SSF51197	Clavaminate synthase-like
Eco28_RS14285	SSF103473	MFS general substrate transporter
Eco28_RS14290	SSF110857	Gamma-glutamyl cyclotransferase-like
Eco28_RS14295	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS14295	SSF53850	Periplasmic binding protein-like II
Eco28_RS14335	SSF47413	lambda repressor-like DNA-binding domains
Eco28_RS14340	SSF46934	UBA-like
Eco28_RS14400	SSF56349	DNA breaking-rejoining enzymes
Eco28_RS14405	SSF52402	Adenine nucleotide alpha hydrolases-like
Eco28_RS14410	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS14420	SSF143865	CorA soluble domain-like
Eco28_RS14420	SSF144083	Magnesium transport protein CorA, transmembrane region
Eco28_RS14425	SSF55073	Nucleotide cyclase
Eco28_RS14425	SSF55785	PYP-like sensor domain (PAS domain)
Eco28_RS14430	SSF160443	SMR domain-like
Eco28_RS14440	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS14440	SSF53850	Periplasmic binding protein-like II
Eco28_RS14445	SSF53187	Zn-dependent exopeptidases
Eco28_RS14445	SSF55031	Bacterial exopeptidase dimerisation domain
Eco28_RS14450	SSF53187	Zn-dependent exopeptidases
Eco28_RS14450	SSF55031	Bacterial exopeptidase dimerisation domain
Eco28_RS14465	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
Eco28_RS14465	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
Eco28_RS14470	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS14470	SSF51206	cAMP-binding domain-like
Eco28_RS14475	SSF52402	Adenine nucleotide alpha hydrolases-like
Eco28_RS14485	SSF50182	Sm-like ribonucleoproteins
Eco28_RS14485	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
Eco28_RS14485	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
Eco28_RS14490	SSF53850	Periplasmic binding protein-like II
Eco28_RS14495	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS14495	SSF53850	Periplasmic binding protein-like II
Eco28_RS14500	SSF53474	alpha/beta-Hydrolases
Eco28_RS14505	SSF53474	alpha/beta-Hydrolases
Eco28_RS14510	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS14515	SSF53187	Zn-dependent exopeptidases
Eco28_RS14520	SSF51604	Enolase C-terminal domain-like
Eco28_RS14520	SSF54826	Enolase N-terminal domain-like
Eco28_RS14525	SSF52833	Thioredoxin-like
Eco28_RS14530	SSF46689	Homeodomain-like
Eco28_RS14530	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS14530	SSF55021	ACT-like
Eco28_RS14530	SSF55785	PYP-like sensor domain (PAS domain)
Eco28_RS14545	SSF47413	lambda repressor-like DNA-binding domains
Eco28_RS14545	SSF53822	Periplasmic binding protein-like I
Eco28_RS14550	SSF56935	Porins
Eco28_RS14555	SSF50331	MOP-like
Eco28_RS14555	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS14560	SSF56784	HAD-like
Eco28_RS14565	SSF48208	Six-hairpin glycosidases
Eco28_RS14565	SSF74650	Galactose mutarotase-like
Eco28_RS14570	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS14570	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Eco28_RS14575	SSF51658	Xylose isomerase-like
Eco28_RS14580	SSF50129	GroES-like
Eco28_RS14580	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS14585	SSF161098	MetI-like
Eco28_RS14590	SSF161098	MetI-like
Eco28_RS14595	SSF53850	Periplasmic binding protein-like II
Eco28_RS14600	SSF51445	(Trans)glycosidases
Eco28_RS14605	SSF52821	Rhodanese/Cell cycle control phosphatase
Eco28_RS14630	SSF46689	Homeodomain-like
Eco28_RS14630	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS14635	SSF53383	PLP-dependent transferases
Eco28_RS14640	SSF51905	FAD/NAD(P)-binding domain
Eco28_RS14645	SSF53720	ALDH-like
Eco28_RS14650	SSF47413	lambda repressor-like DNA-binding domains
Eco28_RS14650	SSF51182	RmlC-like cupins
Eco28_RS14655	SSF52317	Class I glutamine amidotransferase-like
Eco28_RS14660	SSF54368	Glutamine synthetase, N-terminal domain
Eco28_RS14660	SSF55931	Glutamine synthetase/guanido kinase
Eco28_RS14680	SSF53850	Periplasmic binding protein-like II
Eco28_RS14685	SSF161098	MetI-like
Eco28_RS14690	SSF161098	MetI-like
Eco28_RS14695	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS14700	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS14705	SSF103473	MFS general substrate transporter
Eco28_RS14710	SSF56954	Outer membrane efflux proteins (OEP)
Eco28_RS14720	SSF111369	HlyD-like secretion proteins
Eco28_RS14725	SSF46689	Homeodomain-like
Eco28_RS14730	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS14735	SSF69118	AhpD-like
Eco28_RS14740	SSF50249	Nucleic acid-binding proteins
Eco28_RS14750	SSF141868	EAL domain-like
Eco28_RS14750	SSF55073	Nucleotide cyclase
Eco28_RS14750	SSF55785	PYP-like sensor domain (PAS domain)
Eco28_RS14760	SSF100950	NagB/RpiA/CoA transferase-like
Eco28_RS14760	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS14770	SSF55159	eIF1-like
Eco28_RS14775	SSF51366	Ribulose-phoshate binding barrel
Eco28_RS14780	SSF48452	TPR-like
Eco28_RS14790	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
Eco28_RS14795	SSF142695	RibA-like
Eco28_RS14800	SSF52016	LeuD/IlvD-like
Eco28_RS14800	SSF53732	Aconitase iron-sulfur domain
Eco28_RS14820	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS14820	SSF53850	Periplasmic binding protein-like II
Eco28_RS14830	SSF143422	Transposase IS200-like
Eco28_RS14840	SSF56712	Prokaryotic type I DNA topoisomerase
Eco28_RS14840	SSF57783	Zinc beta-ribbon
Eco28_RS14855	SSF52096	ClpP/crotonase
Eco28_RS14860	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS14865	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS14870	SSF55120	Pseudouridine synthase
Eco28_RS14870	SSF55174	Alpha-L RNA-binding motif
Eco28_RS14880	SSF55821	YrdC/RibB
Eco28_RS14885	SSF89550	PHP domain-like
Eco28_RS14890	SSF56322	ADC synthase
Eco28_RS14895	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
Eco28_RS14895	SSF52317	Class I glutamine amidotransferase-like
Eco28_RS14895	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
Eco28_RS14900	SSF51366	Ribulose-phoshate binding barrel
Eco28_RS14905	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Eco28_RS14910	SSF51366	Ribulose-phoshate binding barrel
Eco28_RS14920	SSF47240	Ferritin-like
Eco28_RS14925	SSF47240	Ferritin-like
Eco28_RS14930	SSF56925	OMPA-like
Eco28_RS14945	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Eco28_RS14950	SSF74653	TolA/TonB C-terminal domain
Eco28_RS14955	SSF54909	Dimeric alpha+beta barrel
Eco28_RS14960	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS14960	SSF81324	Voltage-gated potassium channels
Eco28_RS14970	SSF56024	Phospholipase D/nuclease
Eco28_RS14975	SSF102816	Putative dsDNA mimic
Eco28_RS14980	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS14985	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS14990	SSF161098	MetI-like
Eco28_RS14995	SSF161098	MetI-like
Eco28_RS15000	SSF53850	Periplasmic binding protein-like II
Eco28_RS15015	SSF53720	ALDH-like
Eco28_RS15015	SSF56796	Dehydroquinate synthase-like
Eco28_RS15020	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS15020	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Eco28_RS15025	SSF81273	H-NS histone-like proteins
Eco28_RS15030	SSF53448	Nucleotide-diphospho-sugar transferases
Eco28_RS15035	SSF52172	CheY-like
Eco28_RS15040	SSF52151	FabD/lysophospholipase-like
Eco28_RS15045	SSF103642	Sec-C motif
Eco28_RS15045	SSF54427	NTF2-like
Eco28_RS15050	SSF53328	Formyltransferase
Eco28_RS15050	SSF55021	ACT-like
Eco28_RS15075	SSF103501	Respiratory nitrate reductase 1 gamma chain
Eco28_RS15080	SSF89155	TorD-like
Eco28_RS15085	SSF54862	4Fe-4S ferredoxins
Eco28_RS15090	SSF50692	ADC-like
Eco28_RS15090	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Eco28_RS15095	SSF103473	MFS general substrate transporter
Eco28_RS15105	SSF158472	HAMP domain-like
Eco28_RS15105	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Eco28_RS15110	SSF46894	C-terminal effector domain of the bipartite response regulators
Eco28_RS15110	SSF52172	CheY-like
Eco28_RS15120	SSF75169	DsrEFH-like
Eco28_RS15125	SSF110857	Gamma-glutamyl cyclotransferase-like
Eco28_RS15130	SSF140376	ChaB-like
Eco28_RS15160	SSF51569	Aldolase
Eco28_RS15175	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS15180	SSF75620	Release factor
Eco28_RS15185	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS15185	SSF69075	Glutamyl tRNA-reductase dimerization domain
Eco28_RS15185	SSF69742	Glutamyl tRNA-reductase catalytic, N-terminal domain
Eco28_RS15190	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
Eco28_RS15195	SSF54211	Ribosomal protein S5 domain 2-like
Eco28_RS15195	SSF55060	GHMP Kinase, C-terminal domain
Eco28_RS15200	SSF53271	PRTase-like
Eco28_RS15205	SSF52091	SpoIIaa-like
Eco28_RS15215	SSF53178	Peptidyl-tRNA hydrolase-like
Eco28_RS15220	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS15220	SSF81271	TGS-like
Eco28_RS15235	SSF103515	Autotransporter
Eco28_RS15235	SSF51126	Pectin lyase-like
Eco28_RS15240	SSF46689	Homeodomain-like
Eco28_RS15240	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS15240	SSF55785	PYP-like sensor domain (PAS domain)
Eco28_RS15245	SSF82549	DAK1/DegV-like
Eco28_RS15250	SSF101473	DhaL-like
Eco28_RS15255	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
Eco28_RS15255	SSF52009	Phosphohistidine domain
Eco28_RS15255	SSF53062	PTS system fructose IIA component-like
Eco28_RS15255	SSF55594	HPr-like
Eco28_RS15265	SSF48208	Six-hairpin glycosidases
Eco28_RS15275	SSF53807	"Helical backbone" metal receptor
Eco28_RS15280	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Eco28_RS15285	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS15290	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS15295	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
Eco28_RS15295	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
Eco28_RS15300	SSF56935	Porins
Eco28_RS15315	SSF53955	Lysozyme-like
Eco28_RS15325	SSF141986	LD-carboxypeptidase A C-terminal domain-like
Eco28_RS15325	SSF52317	Class I glutamine amidotransferase-like
Eco28_RS15330	SSF116726	TrkA C-terminal domain-like
Eco28_RS15330	SSF56176	FAD-binding/transporter-associated domain-like
Eco28_RS15335	SSF52058	L domain-like
Eco28_RS15340	SSF50621	Alanine racemase C-terminal domain-like
Eco28_RS15340	SSF51419	PLP-binding barrel
Eco28_RS15345	SSF51905	FAD/NAD(P)-binding domain
Eco28_RS15345	SSF54373	FAD-linked reductases, C-terminal domain
Eco28_RS15355	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS15355	SSF48008	GntR ligand-binding domain-like
Eco28_RS15365	SSF158442	DsbB-like
Eco28_RS15370	SSF100879	Lesion bypass DNA polymerase (Y-family), little finger domain
Eco28_RS15370	SSF56672	DNA/RNA polymerases
Eco28_RS15375	SSF51306	LexA/Signal peptidase
Eco28_RS15380	SSF58100	Bacterial hemolysins
Eco28_RS15390	SSF56529	FAH
Eco28_RS15395	SSF160191	YcgL-like
Eco28_RS15420	SSF63848	Cell-division inhibitor MinC, C-terminal domain
Eco28_RS15425	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS15430	SSF55229	Cell division protein MinE topological specificity domain
Eco28_RS15435	SSF103515	Autotransporter
Eco28_RS15460	SSF103515	Autotransporter
Eco28_RS15460	SSF51126	Pectin lyase-like
Eco28_RS15475	SSF141868	EAL domain-like
Eco28_RS15500	SSF141868	EAL domain-like
Eco28_RS15500	SSF54975	Acylphosphatase/BLUF domain-like
Eco28_RS15505	SSF46955	Putative DNA-binding domain
Eco28_RS15510	SSF160419	YdfO-like
Eco28_RS15515	SSF143422	Transposase IS200-like
Eco28_RS15535	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
Eco28_RS15540	SSF55120	Pseudouridine synthase
Eco28_RS15545	SSF55811	Nudix
Eco28_RS15550	SSF52402	Adenine nucleotide alpha hydrolases-like
Eco28_RS15555	SSF101322	YcfC-like
Eco28_RS15560	SSF48557	L-aspartase-like
Eco28_RS15565	SSF52172	CheY-like
Eco28_RS15570	SSF47384	Homodimeric domain of signal transducing histidine kinase
Eco28_RS15570	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Eco28_RS15575	SSF51197	Clavaminate synthase-like
Eco28_RS15580	SSF53187	Zn-dependent exopeptidases
Eco28_RS15580	SSF55031	Bacterial exopeptidase dimerisation domain
Eco28_RS15590	SSF50331	MOP-like
Eco28_RS15590	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS15595	SSF161098	MetI-like
Eco28_RS15600	SSF161098	MetI-like
Eco28_RS15605	SSF53850	Periplasmic binding protein-like II
Eco28_RS15610	SSF52467	DHS-like NAD/FAD-binding domain
Eco28_RS15615	SSF53067	Actin-like ATPase domain
Eco28_RS15625	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS15640	SSF141259	CarD-like
Eco28_RS15640	SSF143517	TRCF domain-like
Eco28_RS15640	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS15645	SSF141523	L,D-transpeptidase catalytic domain-like
Eco28_RS15650	SSF159871	YdgH-like
Eco28_RS15655	SSF46689	Homeodomain-like
Eco28_RS15655	SSF48498	Tetracyclin repressor-like, C-terminal domain
Eco28_RS15670	SSF51905	FAD/NAD(P)-binding domain
Eco28_RS15675	SSF53474	alpha/beta-Hydrolases
Eco28_RS15680	SSF51445	(Trans)glycosidases
Eco28_RS15685	SSF56112	Protein kinase-like (PK-like)
Eco28_RS15700	SSF54197	HIT-like
Eco28_RS15705	SSF56935	Porins
Eco28_RS15715	SSF69279	Phage tail proteins
Eco28_RS15750	SSF46689	Homeodomain-like
Eco28_RS15750	SSF53041	Resolvase-like
Eco28_RS15755	SSF88874	Receptor-binding domain of short tail fibre protein gp12
Eco28_RS15785	SSF160719	gpW/gp25-like
Eco28_RS15820	SSF53955	Lysozyme-like
Eco28_RS15875	SSF48452	TPR-like
Eco28_RS15880	SSF54857	DNA damage-inducible protein DinI
Eco28_RS15895	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS15900	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Eco28_RS15940	SSF56349	DNA breaking-rejoining enzymes
Eco28_RS15950	SSF56935	Porins
Eco28_RS15955	SSF55604	Glucose permease domain IIB
Eco28_RS15960	SSF51556	Metallo-dependent hydrolases
Eco28_RS15965	SSF48019	post-AAA+ oligomerization domain-like
Eco28_RS15965	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS15970	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS15980	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
Eco28_RS15985	SSF53901	Thiolase-like
Eco28_RS15990	SSF47336	ACP-like
Eco28_RS15995	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS16000	SSF52151	FabD/lysophospholipase-like
Eco28_RS16000	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
Eco28_RS16005	SSF53901	Thiolase-like
Eco28_RS16010	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
Eco28_RS16015	SSF57829	Zn-binding ribosomal proteins
Eco28_RS16025	SSF52972	ITPase-like
Eco28_RS16030	SSF55120	Pseudouridine synthase
Eco28_RS16030	SSF55174	Alpha-L RNA-binding motif
Eco28_RS16040	SSF50249	Nucleic acid-binding proteins
Eco28_RS16045	SSF64518	Phase 1 flagellin
Eco28_RS16050	SSF64518	Phase 1 flagellin
Eco28_RS16070	SSF117143	Flagellar hook protein flgE
Eco28_RS16075	SSF117143	Flagellar hook protein flgE
Eco28_RS16080	SSF117143	Flagellar hook protein flgE
Eco28_RS16105	SSF101498	Anti-sigma factor FlgM
Eco28_RS16110	SSF140566	FlgN-like
Eco28_RS16120	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS16120	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Eco28_RS16125	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS16130	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Eco28_RS16135	SSF103473	MFS general substrate transporter
Eco28_RS16140	SSF47616	GST C-terminal domain-like
Eco28_RS16140	SSF52833	Thioredoxin-like
Eco28_RS16150	SSF51556	Metallo-dependent hydrolases
Eco28_RS16155	SSF54857	DNA damage-inducible protein DinI
Eco28_RS16165	SSF51905	FAD/NAD(P)-binding domain
Eco28_RS16165	SSF54373	FAD-linked reductases, C-terminal domain
Eco28_RS16175	SSF81342	Transmembrane di-heme cytochromes
Eco28_RS16180	SSF101874	YceI-like
Eco28_RS16185	SSF52821	Rhodanese/Cell cycle control phosphatase
Eco28_RS16195	SSF103473	MFS general substrate transporter
Eco28_RS16210	SSF53448	Nucleotide-diphospho-sugar transferases
Eco28_RS16215	SSF74650	Galactose mutarotase-like
Eco28_RS16215	SSF81296	E set domains
Eco28_RS16235	SSF56024	Phospholipase D/nuclease
Eco28_RS16240	SSF52949	Macro domain-like
Eco28_RS16275	SSF46894	C-terminal effector domain of the bipartite response regulators
Eco28_RS16300	SSF89155	TorD-like
Eco28_RS16305	SSF89550	PHP domain-like
Eco28_RS16310	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS16340	SSF143737	YeeU-like
Eco28_RS16355	SSF102712	JAB1/MPN domain
Eco28_RS16380	SSF52151	FabD/lysophospholipase-like
Eco28_RS16390	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS16395	SSF103515	Autotransporter
Eco28_RS16395	SSF51126	Pectin lyase-like
Eco28_RS16400	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS16410	SSF46689	Homeodomain-like
Eco28_RS16435	SSF160719	gpW/gp25-like
Eco28_RS16440	SSF47345	Colicin E immunity proteins
Eco28_RS16455	SSF69255	gp5 N-terminal domain-like
Eco28_RS16455	SSF69279	Phage tail proteins
Eco28_RS16505	SSF53955	Lysozyme-like
Eco28_RS16510	SSF69255	gp5 N-terminal domain-like
Eco28_RS16510	SSF69279	Phage tail proteins
Eco28_RS16515	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS16515	SSF81923	Double Clp-N motif
Eco28_RS16520	SSF141452	Hcp1-like
Eco28_RS16525	SSF103088	OmpA-like
Eco28_RS16630	SSF56349	DNA breaking-rejoining enzymes
Eco28_RS16645	SSF52151	FabD/lysophospholipase-like
Eco28_RS16645	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
Eco28_RS16655	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
Eco28_RS16670	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS16680	SSF53901	Thiolase-like
Eco28_RS16685	SSF53901	Thiolase-like
Eco28_RS16690	SSF101790	Aminomethyltransferase beta-barrel domain
Eco28_RS16690	SSF103025	Folate-binding domain
Eco28_RS16695	SSF47336	ACP-like
Eco28_RS16700	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Eco28_RS16705	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS16710	SSF56214	4'-phosphopantetheinyl transferase
Eco28_RS16720	SSF51126	Pectin lyase-like
Eco28_RS16730	SSF49401	Bacterial adhesins
Eco28_RS16735	SSF49354	PapD-like
Eco28_RS16735	SSF49584	Periplasmic chaperone C-domain
Eco28_RS16740	SSF141729	FimD N-terminal domain-like
Eco28_RS16745	SSF49401	Bacterial adhesins
Eco28_RS16750	SSF49354	PapD-like
Eco28_RS16750	SSF49584	Periplasmic chaperone C-domain
Eco28_RS16755	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS16770	SSF141868	EAL domain-like
Eco28_RS16775	SSF55073	Nucleotide cyclase
Eco28_RS16785	SSF48452	TPR-like
Eco28_RS16790	SSF88713	Glycoside hydrolase/deacetylase
Eco28_RS16795	SSF53448	Nucleotide-diphospho-sugar transferases
Eco28_RS16805	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS16810	SSF54909	Dimeric alpha+beta barrel
Eco28_RS16815	SSF49503	Cupredoxins
Eco28_RS16820	SSF103473	MFS general substrate transporter
Eco28_RS16850	SSF47598	Ribbon-helix-helix
Eco28_RS16850	SSF51730	FAD-linked oxidoreductase
Eco28_RS16850	SSF53720	ALDH-like
Eco28_RS16850	SSF81935	N-terminal domain of bifunctional PutA protein
Eco28_RS16855	SSF46689	Homeodomain-like
Eco28_RS16855	SSF48498	Tetracyclin repressor-like, C-terminal domain
Eco28_RS16860	SSF51679	Bacterial luciferase-like
Eco28_RS16865	SSF52499	Isochorismatase-like hydrolases
Eco28_RS16870	SSF55298	YjgF-like
Eco28_RS16875	SSF53474	alpha/beta-Hydrolases
Eco28_RS16880	SSF55469	FMN-dependent nitroreductase-like
Eco28_RS16885	SSF50475	FMN-binding split barrel
Eco28_RS16905	SSF52218	Flavoproteins
Eco28_RS16915	SSF53254	Phosphoglycerate mutase-like
Eco28_RS16925	SSF46565	Chaperone J-domain
Eco28_RS16925	SSF49493	HSP40/DnaJ peptide-binding domain
Eco28_RS16935	SSF89155	TorD-like
Eco28_RS16940	SSF50692	ADC-like
Eco28_RS16940	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Eco28_RS16945	SSF48695	Multiheme cytochromes
Eco28_RS16950	SSF52172	CheY-like
Eco28_RS16955	SSF53822	Periplasmic binding protein-like I
Eco28_RS16960	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
Eco28_RS16960	SSF47384	Homodimeric domain of signal transducing histidine kinase
Eco28_RS16960	SSF52172	CheY-like
Eco28_RS16960	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Eco28_RS16965	SSF54862	4Fe-4S ferredoxins
Eco28_RS16985	SSF50249	Nucleic acid-binding proteins
Eco28_RS16990	SSF50249	Nucleic acid-binding proteins
Eco28_RS17010	SSF159270	YmcC-like
Eco28_RS17030	SSF52788	Phosphotyrosine protein phosphatases I
Eco28_RS17035	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS17040	SSF53254	Phosphoglycerate mutase-like
Eco28_RS17065	SSF52833	Thioredoxin-like
Eco28_RS17070	SSF53163	HybD-like
Eco28_RS17075	SSF81342	Transmembrane di-heme cytochromes
Eco28_RS17080	SSF56762	HydB/Nqo4-like
Eco28_RS17085	SSF56770	HydA/Nqo6-like
Eco28_RS17100	SSF69721	DsrC, the gamma subunit of dissimilatory sulfite reductase
Eco28_RS17105	SSF54975	Acylphosphatase/BLUF domain-like
Eco28_RS17110	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS17110	SSF88697	PUA domain-like
Eco28_RS17115	SSF141255	YccV-like
Eco28_RS17120	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS17130	SSF52335	Methylglyoxal synthase-like
Eco28_RS17135	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS17150	SSF159894	YgaC/TfoX-N like
Eco28_RS17155	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS17165	SSF103088	OmpA-like
Eco28_RS17165	SSF56925	OMPA-like
Eco28_RS17175	SSF54211	Ribosomal protein S5 domain 2-like
Eco28_RS17180	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Eco28_RS17190	SSF159594	XCC0632-like
Eco28_RS17205	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS17210	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS17215	SSF141673	MOSC N-terminal domain-like
Eco28_RS17215	SSF50800	PK beta-barrel domain-like
Eco28_RS17215	SSF54292	2Fe-2S ferredoxin-like
Eco28_RS17225	SSF51395	FMN-linked oxidoreductases
Eco28_RS17230	SSF49354	PapD-like
Eco28_RS17230	SSF49584	Periplasmic chaperone C-domain
Eco28_RS17235	SSF49401	Bacterial adhesins
Eco28_RS17240	SSF49401	Bacterial adhesins
Eco28_RS17250	SSF141729	FimD N-terminal domain-like
Eco28_RS17265	SSF49354	PapD-like
Eco28_RS17265	SSF49584	Periplasmic chaperone C-domain
Eco28_RS17270	SSF49401	Bacterial adhesins
Eco28_RS17280	SSF52218	Flavoproteins
Eco28_RS17285	SSF53850	Periplasmic binding protein-like II
Eco28_RS17290	SSF51679	Bacterial luciferase-like
Eco28_RS17295	SSF161098	MetI-like
Eco28_RS17300	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS17305	SSF55486	Metalloproteases ("zincins"), catalytic domain
Eco28_RS17305	SSF63737	Leukotriene A4 hydrolase N-terminal domain
Eco28_RS17310	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
Eco28_RS17310	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
Eco28_RS17315	SSF50249	Nucleic acid-binding proteins
Eco28_RS17315	SSF55681	Class II aaRS and biotin synthetases
Eco28_RS17320	SSF56935	Porins
Eco28_RS17330	SSF53383	PLP-dependent transferases
Eco28_RS17335	SSF56281	Metallo-hydrolase/oxidoreductase
Eco28_RS17340	SSF55166	Hedgehog/DD-peptidase
Eco28_RS17350	SSF141523	L,D-transpeptidase catalytic domain-like
Eco28_RS17350	SSF47090	PGBD-like
Eco28_RS17355	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS17365	SSF140570	MukF C-terminal domain-like
Eco28_RS17365	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS17370	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS17380	SSF56112	Protein kinase-like (PK-like)
Eco28_RS17385	SSF53448	Nucleotide-diphospho-sugar transferases
Eco28_RS17390	SSF158997	Trm112p-like
Eco28_RS17400	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS17405	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS17405	SSF90123	ABC transporter transmembrane region
Eco28_RS17410	SSF56281	Metallo-hydrolase/oxidoreductase
Eco28_RS17415	SSF47729	IHF-like DNA-binding proteins
Eco28_RS17420	SSF50249	Nucleic acid-binding proteins
Eco28_RS17425	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS17430	SSF53098	Ribonuclease H-like
Eco28_RS17440	SSF55205	EPT/RTPC-like
Eco28_RS17445	SSF53383	PLP-dependent transferases
Eco28_RS17465	SSF51998	PFL-like glycyl radical enzymes
Eco28_RS17470	SSF102114	Radical SAM enzymes
Eco28_RS17485	SSF53098	Ribonuclease H-like
Eco28_RS17495	SSF103473	MFS general substrate transporter
Eco28_RS17500	SSF52499	Isochorismatase-like hydrolases
Eco28_RS17510	SSF54862	4Fe-4S ferredoxins
Eco28_RS17515	SSF50692	ADC-like
Eco28_RS17515	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Eco28_RS17520	SSF46589	tRNA-binding arm
Eco28_RS17520	SSF55681	Class II aaRS and biotin synthetases
Eco28_RS17525	SSF48019	post-AAA+ oligomerization domain-like
Eco28_RS17525	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS17530	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
Eco28_RS17535	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS17535	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS17540	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS17540	SSF54909	Dimeric alpha+beta barrel
Eco28_RS17550	SSF51905	FAD/NAD(P)-binding domain
Eco28_RS17555	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS17555	SSF90123	ABC transporter transmembrane region
Eco28_RS17560	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS17560	SSF90123	ABC transporter transmembrane region
Eco28_RS17565	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Eco28_RS17575	SSF50249	Nucleic acid-binding proteins
Eco28_RS17605	SSF143737	YeeU-like
Eco28_RS17640	SSF103515	Autotransporter
Eco28_RS17640	SSF51126	Pectin lyase-like
Eco28_RS17645	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS17655	SSF46689	Homeodomain-like
Eco28_RS17660	SSF53300	vWA-like
Eco28_RS17685	SSF158682	TerB-like
Eco28_RS17700	SSF56059	Glutathione synthetase ATP-binding domain-like
Eco28_RS17705	SSF53271	PRTase-like
Eco28_RS17710	SSF56784	HAD-like
Eco28_RS17720	SSF51621	Phosphoenolpyruvate/pyruvate domain
Eco28_RS17750	SSF103515	Autotransporter
Eco28_RS17800	SSF56349	DNA breaking-rejoining enzymes
Eco28_RS17805	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS17805	SSF81923	Double Clp-N motif
Eco28_RS17810	SSF54736	ClpS-like
Eco28_RS17815	SSF50249	Nucleic acid-binding proteins
Eco28_RS17820	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS17825	SSF111369	HlyD-like secretion proteins
Eco28_RS17835	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS17840	SSF81338	Aquaporin-like
Eco28_RS17855	SSF56821	Prismane protein-like
Eco28_RS17860	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
Eco28_RS17860	SSF54292	2Fe-2S ferredoxin-like
Eco28_RS17860	SSF63380	Riboflavin synthase domain-like
Eco28_RS17865	SSF52467	DHS-like NAD/FAD-binding domain
Eco28_RS17865	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Eco28_RS17870	SSF53383	PLP-dependent transferases
Eco28_RS17875	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS17875	SSF55961	Bet v1-like
Eco28_RS17880	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS17885	SSF47090	PGBD-like
Eco28_RS17885	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
Eco28_RS17890	SSF117782	YbjQ-like
Eco28_RS17900	SSF141571	Pentapeptide repeat-like
Eco28_RS17915	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS17920	SSF53850	Periplasmic binding protein-like II
Eco28_RS17925	SSF161098	MetI-like
Eco28_RS17930	SSF161098	MetI-like
Eco28_RS17935	SSF53850	Periplasmic binding protein-like II
Eco28_RS17940	SSF53649	Alkaline phosphatase-like
Eco28_RS17945	SSF52794	PTS system IIB component-like
Eco28_RS17955	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS17965	SSF161098	MetI-like
Eco28_RS17970	SSF161098	MetI-like
Eco28_RS17975	SSF50331	MOP-like
Eco28_RS17975	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS17980	SSF53850	Periplasmic binding protein-like II
Eco28_RS17995	SSF56059	Glutathione synthetase ATP-binding domain-like
Eco28_RS18000	SSF55469	FMN-dependent nitroreductase-like
Eco28_RS18010	SSF52833	Thioredoxin-like
Eco28_RS18020	SSF116726	TrkA C-terminal domain-like
Eco28_RS18025	SSF51161	Trimeric LpxA-like enzymes
Eco28_RS18030	SSF46689	Homeodomain-like
Eco28_RS18030	SSF48498	Tetracyclin repressor-like, C-terminal domain
Eco28_RS18035	SSF103473	MFS general substrate transporter
Eco28_RS18040	SSF56784	HAD-like
Eco28_RS18050	SSF103473	MFS general substrate transporter
Eco28_RS18055	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
Eco28_RS18060	SSF100950	NagB/RpiA/CoA transferase-like
Eco28_RS18065	SSF56601	beta-lactamase/transpeptidase-like
Eco28_RS18065	SSF69189	Penicillin-binding protein associated domain
Eco28_RS18070	SSF47616	GST C-terminal domain-like
Eco28_RS18070	SSF52833	Thioredoxin-like
Eco28_RS18075	SSF50952	Soluble quinoprotein glucose dehydrogenase
Eco28_RS18085	SSF102114	Radical SAM enzymes
Eco28_RS18095	SSF47413	lambda repressor-like DNA-binding domains
Eco28_RS18100	SSF55073	Nucleotide cyclase
Eco28_RS18105	SSF141868	EAL domain-like
Eco28_RS18110	SSF53098	Ribonuclease H-like
Eco28_RS18120	SSF161098	MetI-like
Eco28_RS18125	SSF161098	MetI-like
Eco28_RS18130	SSF53850	Periplasmic binding protein-like II
Eco28_RS18135	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS18140	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Eco28_RS18145	SSF53218	Molybdenum cofactor biosynthesis proteins
Eco28_RS18145	SSF63867	MoeA C-terminal domain-like
Eco28_RS18145	SSF63882	MoeA N-terminal region -like
Eco28_RS18150	SSF69572	Activating enzymes of the ubiquitin-like proteins
Eco28_RS18155	SSF51569	Aldolase
Eco28_RS18160	SSF102114	Radical SAM enzymes
Eco28_RS18165	SSF51998	PFL-like glycyl radical enzymes
Eco28_RS18170	SSF56784	HAD-like
Eco28_RS18175	SSF51197	Clavaminate synthase-like
Eco28_RS18180	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS18185	SSF141523	L,D-transpeptidase catalytic domain-like
Eco28_RS18195	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS18195	SSF47979	Iron-dependent repressor protein, dimerization domain
Eco28_RS18205	SSF53649	Alkaline phosphatase-like
Eco28_RS18210	SSF56925	OMPA-like
Eco28_RS18215	SSF103481	Multidrug resistance efflux transporter EmrE
Eco28_RS18220	SSF47240	Ferritin-like
Eco28_RS18235	SSF53850	Periplasmic binding protein-like II
Eco28_RS18240	SSF161098	MetI-like
Eco28_RS18245	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS18250	SSF50182	Sm-like ribonucleoproteins
Eco28_RS18250	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
Eco28_RS18250	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
Eco28_RS18255	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS18260	SSF159871	YdgH-like
Eco28_RS18265	SSF56935	Porins
Eco28_RS18270	SSF51197	Clavaminate synthase-like
Eco28_RS18275	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Eco28_RS18280	SSF159871	YdgH-like
Eco28_RS18285	SSF89733	L-sulfolactate dehydrogenase-like
Eco28_RS18290	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
Eco28_RS18290	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
Eco28_RS18295	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS18310	SSF53098	Ribonuclease H-like
Eco28_RS18320	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS18325	SSF46689	Homeodomain-like
Eco28_RS18325	SSF48498	Tetracyclin repressor-like, C-terminal domain
Eco28_RS18330	SSF111369	HlyD-like secretion proteins
Eco28_RS18335	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS18355	SSF56219	DNase I-like
Eco28_RS18360	SSF56024	Phospholipase D/nuclease
Eco28_RS18380	SSF54690	Molybdopterin synthase subunit MoaE
Eco28_RS18385	SSF54285	MoaD/ThiS
Eco28_RS18390	SSF55040	Molybdenum cofactor biosynthesis protein C, MoaC
Eco28_RS18395	SSF53218	Molybdenum cofactor biosynthesis proteins
Eco28_RS18400	SSF102114	Radical SAM enzymes
Eco28_RS18405	SSF142338	CofD-like
Eco28_RS18410	SSF46600	C-terminal UvrC-binding domain of UvrB
Eco28_RS18410	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS18415	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS18420	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS18425	SSF53383	PLP-dependent transferases
Eco28_RS18430	SSF102114	Radical SAM enzymes
Eco28_RS18435	SSF53383	PLP-dependent transferases
Eco28_RS18440	SSF49777	PEBP-like
Eco28_RS18450	SSF51126	Pectin lyase-like
Eco28_RS18455	SSF52016	LeuD/IlvD-like
Eco28_RS18455	SSF53732	Aconitase iron-sulfur domain
Eco28_RS18465	SSF54506	Diaminopimelate epimerase-like
Eco28_RS18470	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS18470	SSF53850	Periplasmic binding protein-like II
Eco28_RS18475	SSF50974	Nitrous oxide reductase, N-terminal domain
Eco28_RS18480	SSF56784	HAD-like
Eco28_RS18485	SSF50331	MOP-like
Eco28_RS18485	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS18490	SSF161098	MetI-like
Eco28_RS18495	SSF53850	Periplasmic binding protein-like II
Eco28_RS18510	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS18510	SSF50331	MOP-like
Eco28_RS18515	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS18520	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS18525	SSF54197	HIT-like
Eco28_RS18530	SSF54211	Ribosomal protein S5 domain 2-like
Eco28_RS18530	SSF55060	GHMP Kinase, C-terminal domain
Eco28_RS18535	SSF74650	Galactose mutarotase-like
Eco28_RS18540	SSF53254	Phosphoglycerate mutase-like
Eco28_RS18545	SSF51569	Aldolase
Eco28_RS18560	SSF160240	Cation efflux protein cytoplasmic domain-like
Eco28_RS18560	SSF161111	Cation efflux protein transmembrane domain-like
Eco28_RS18570	SSF142754	NadA-like
Eco28_RS18605	SSF48452	TPR-like
Eco28_RS18610	SSF103088	OmpA-like
Eco28_RS18615	SSF52964	TolB, N-terminal domain
Eco28_RS18615	SSF69304	Tricorn protease N-terminal domain
Eco28_RS18620	SSF74653	TolA/TonB C-terminal domain
Eco28_RS18635	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Eco28_RS18675	SSF52242	Cobalamin (vitamin B12)-binding domain
Eco28_RS18685	SSF51703	Cobalamin (vitamin B12)-dependent enzymes
Eco28_RS18690	SSF51604	Enolase C-terminal domain-like
Eco28_RS18690	SSF54826	Enolase N-terminal domain-like
Eco28_RS18705	SSF118215	Proton glutamate symport protein
Eco28_RS18710	SSF117457	FumA C-terminal domain-like
Eco28_RS18715	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS18720	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS18720	SSF53850	Periplasmic binding protein-like II
Eco28_RS18735	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS18735	SSF52210	Succinyl-CoA synthetase domains
Eco28_RS18740	SSF52210	Succinyl-CoA synthetase domains
Eco28_RS18740	SSF56059	Glutathione synthetase ATP-binding domain-like
Eco28_RS18745	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
Eco28_RS18745	SSF51230	Single hybrid motif
Eco28_RS18745	SSF52777	CoA-dependent acyltransferases
Eco28_RS18750	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Eco28_RS18755	SSF46548	alpha-helical ferredoxin
Eco28_RS18755	SSF54292	2Fe-2S ferredoxin-like
Eco28_RS18760	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
Eco28_RS18760	SSF51905	FAD/NAD(P)-binding domain
Eco28_RS18760	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Eco28_RS18765	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
Eco28_RS18770	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
Eco28_RS18785	SSF48256	Citrate synthase
Eco28_RS18790	SSF49401	Bacterial adhesins
Eco28_RS18795	SSF141729	FimD N-terminal domain-like
Eco28_RS18800	SSF49354	PapD-like
Eco28_RS18800	SSF49584	Periplasmic chaperone C-domain
Eco28_RS18805	SSF49401	Bacterial adhesins
Eco28_RS18815	SSF46946	S13-like H2TH domain
Eco28_RS18815	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Eco28_RS18815	SSF81624	N-terminal domain of MutM-like DNA repair proteins
Eco28_RS18820	SSF88713	Glycoside hydrolase/deacetylase
Eco28_RS18825	SSF50891	Cyclophilin-like
Eco28_RS18830	SSF160467	PH0987 N-terminal domain-like
Eco28_RS18830	SSF50891	Cyclophilin-like
Eco28_RS18835	SSF102705	NIF3 (NGG1p interacting factor 3)-like
Eco28_RS18840	SSF103473	MFS general substrate transporter
Eco28_RS18845	SSF48173	Cryptochrome/photolyase FAD-binding domain
Eco28_RS18845	SSF52425	Cryptochrome/photolyase, N-terminal domain
Eco28_RS18870	SSF56784	HAD-like
Eco28_RS18870	SSF81653	Calcium ATPase, transduction domain A
Eco28_RS18870	SSF81660	Metal cation-transporting ATPase, ATP-binding domain N
Eco28_RS18870	SSF81665	Calcium ATPase, transmembrane domain M
Eco28_RS18880	SSF47384	Homodimeric domain of signal transducing histidine kinase
Eco28_RS18880	SSF52402	Adenine nucleotide alpha hydrolases-like
Eco28_RS18880	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Eco28_RS18885	SSF52172	CheY-like
Eco28_RS18895	SSF53738	Phosphoglucomutase, first 3 domains
Eco28_RS18895	SSF55957	Phosphoglucomutase, C-terminal domain
Eco28_RS18900	SSF47598	Ribbon-helix-helix
Eco28_RS18900	SSF82808	Replication modulator SeqA, C-terminal DNA-binding domain
Eco28_RS18905	SSF53474	alpha/beta-Hydrolases
Eco28_RS18910	SSF47598	Ribbon-helix-helix
Eco28_RS18915	SSF52218	Flavoproteins
Eco28_RS18925	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS18940	SSF50715	Ribosomal protein L25-like
Eco28_RS18940	SSF52374	Nucleotidylyl transferase
Eco28_RS18945	SSF51261	Duplicated hybrid motif
Eco28_RS18945	SSF55604	Glucose permease domain IIB
Eco28_RS18950	SSF100950	NagB/RpiA/CoA transferase-like
Eco28_RS18955	SSF51338	Composite domain of metallo-dependent hydrolases
Eco28_RS18955	SSF51556	Metallo-dependent hydrolases
Eco28_RS18960	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS18960	SSF53067	Actin-like ATPase domain
Eco28_RS18965	SSF56784	HAD-like
Eco28_RS18975	SSF52402	Adenine nucleotide alpha hydrolases-like
Eco28_RS18975	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Eco28_RS19020	SSF51905	FAD/NAD(P)-binding domain
Eco28_RS19025	SSF53098	Ribonuclease H-like
Eco28_RS19030	SSF102114	Radical SAM enzymes
Eco28_RS19035	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS19040	SSF55486	Metalloproteases ("zincins"), catalytic domain
Eco28_RS19045	SSF54631	CBS-domain pair
Eco28_RS19045	SSF56176	FAD-binding/transporter-associated domain-like
Eco28_RS19050	SSF56317	Carbon-nitrogen hydrolase
Eco28_RS19055	SSF53850	Periplasmic binding protein-like II
Eco28_RS19060	SSF161098	MetI-like
Eco28_RS19065	SSF161098	MetI-like
Eco28_RS19070	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS19075	SSF53590	Nucleoside hydrolase
Eco28_RS19080	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
Eco28_RS19080	SSF53067	Actin-like ATPase domain
Eco28_RS19085	SSF46565	Chaperone J-domain
Eco28_RS19095	SSF81901	HCP-like
Eco28_RS19100	SSF46565	Chaperone J-domain
Eco28_RS19110	SSF81901	HCP-like
Eco28_RS19120	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Eco28_RS19120	SSF50677	ValRS/IleRS/LeuRS editing domain
Eco28_RS19120	SSF52374	Nucleotidylyl transferase
Eco28_RS19130	SSF48019	post-AAA+ oligomerization domain-like
Eco28_RS19130	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS19135	SSF52374	Nucleotidylyl transferase
Eco28_RS19140	SSF53254	Phosphoglycerate mutase-like
Eco28_RS19145	SSF81301	Nucleotidyltransferase
Eco28_RS19150	SSF75217	alpha/beta knot
Eco28_RS19155	SSF56519	Penicillin binding protein dimerisation domain
Eco28_RS19155	SSF56601	beta-lactamase/transpeptidase-like
Eco28_RS19165	SSF110997	Sporulation related repeat
Eco28_RS19165	SSF50685	Barwin-like endoglucanases
Eco28_RS19170	SSF56601	beta-lactamase/transpeptidase-like
Eco28_RS19170	SSF69189	Penicillin-binding protein associated domain
Eco28_RS19175	SSF117991	YbeD/HP0495-like
Eco28_RS19180	SSF55681	Class II aaRS and biotin synthetases
Eco28_RS19190	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS19190	SSF53850	Periplasmic binding protein-like II
Eco28_RS19200	SSF102114	Radical SAM enzymes
Eco28_RS19210	SSF56317	Carbon-nitrogen hydrolase
Eco28_RS19220	SSF50249	Nucleic acid-binding proteins
Eco28_RS19225	SSF56925	OMPA-like
Eco28_RS19240	SSF52172	CheY-like
Eco28_RS19245	SSF103190	Sensory domain-like
Eco28_RS19245	SSF55785	PYP-like sensor domain (PAS domain)
Eco28_RS19245	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Eco28_RS19245	SSF55890	Sporulation response regulatory protein Spo0B
Eco28_RS19250	SSF53098	Ribonuclease H-like
Eco28_RS19260	SSF52374	Nucleotidylyl transferase
Eco28_RS19260	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Eco28_RS19270	SSF51621	Phosphoenolpyruvate/pyruvate domain
Eco28_RS19275	SSF100950	NagB/RpiA/CoA transferase-like
Eco28_RS19295	SSF55895	Ribonuclease Rh-like
Eco28_RS19305	SSF54534	FKBP-like
Eco28_RS19315	SSF50129	GroES-like
Eco28_RS19315	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS19320	SSF52402	Adenine nucleotide alpha hydrolases-like
Eco28_RS19325	SSF51905	FAD/NAD(P)-binding domain
Eco28_RS19325	SSF52833	Thioredoxin-like
Eco28_RS19335	SSF52833	Thioredoxin-like
Eco28_RS19340	SSF52833	Thioredoxin-like
Eco28_RS19340	SSF54423	DsbC/DsbG N-terminal domain-like
Eco28_RS19350	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS19350	SSF53850	Periplasmic binding protein-like II
Eco28_RS19355	SSF52402	Adenine nucleotide alpha hydrolases-like
Eco28_RS19360	SSF110849	ParB/Sulfiredoxin
Eco28_RS19365	SSF53383	PLP-dependent transferases
Eco28_RS19370	SSF56796	Dehydroquinate synthase-like
Eco28_RS19385	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Eco28_RS19390	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS19395	SSF47336	ACP-like
Eco28_RS19395	SSF52499	Isochorismatase-like hydrolases
Eco28_RS19400	SSF56801	Acetyl-CoA synthetase-like
Eco28_RS19405	SSF56322	ADC synthase
Eco28_RS19410	SSF53807	"Helical backbone" metal receptor
Eco28_RS19415	SSF103473	MFS general substrate transporter
Eco28_RS19420	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Eco28_RS19425	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Eco28_RS19430	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS19435	SSF160355	Bacterial polysaccharide co-polymerase-like
Eco28_RS19440	SSF47336	ACP-like
Eco28_RS19440	SSF52777	CoA-dependent acyltransferases
Eco28_RS19440	SSF53474	alpha/beta-Hydrolases
Eco28_RS19440	SSF56801	Acetyl-CoA synthetase-like
Eco28_RS19445	SSF160582	MbtH-like
Eco28_RS19450	SSF53474	alpha/beta-Hydrolases
Eco28_RS19450	SSF81296	E set domains
Eco28_RS19455	SSF56935	Porins
Eco28_RS19460	SSF56214	4'-phosphopantetheinyl transferase
Eco28_RS19490	SSF55931	Glutamine synthetase/guanido kinase
Eco28_RS19500	SSF142906	YjbR-like
Eco28_RS19505	SSF55469	FMN-dependent nitroreductase-like
Eco28_RS19510	SSF50182	Sm-like ribonucleoproteins
Eco28_RS19510	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
Eco28_RS19520	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Eco28_RS19520	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Eco28_RS19520	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Eco28_RS19525	SSF111369	HlyD-like secretion proteins
Eco28_RS19535	SSF56954	Outer membrane efflux proteins (OEP)
Eco28_RS19545	SSF46894	C-terminal effector domain of the bipartite response regulators
Eco28_RS19545	SSF52172	CheY-like
Eco28_RS19550	SSF47384	Homodimeric domain of signal transducing histidine kinase
Eco28_RS19550	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Eco28_RS19555	SSF69255	gp5 N-terminal domain-like
Eco28_RS19555	SSF69279	Phage tail proteins
Eco28_RS19555	SSF69349	Phage fibre proteins
Eco28_RS19560	SSF55724	Mog1p/PsbP-like
Eco28_RS19600	SSF160246	EspE N-terminal domain-like
Eco28_RS19600	SSF53448	Nucleotide-diphospho-sugar transferases
Eco28_RS19605	SSF48452	TPR-like
Eco28_RS19620	SSF46689	Homeodomain-like
Eco28_RS19635	SSF46894	C-terminal effector domain of the bipartite response regulators
Eco28_RS19635	SSF52172	CheY-like
Eco28_RS19640	SSF49401	Bacterial adhesins
Eco28_RS19645	SSF49401	Bacterial adhesins
Eco28_RS19650	SSF141729	FimD N-terminal domain-like
Eco28_RS19655	SSF49354	PapD-like
Eco28_RS19655	SSF49584	Periplasmic chaperone C-domain
Eco28_RS19670	SSF49354	PapD-like
Eco28_RS19675	SSF49401	Bacterial adhesins
Eco28_RS19680	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS19680	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
Eco28_RS19685	SSF55174	Alpha-L RNA-binding motif
Eco28_RS19695	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Eco28_RS19695	SSF52374	Nucleotidylyl transferase
Eco28_RS19700	SSF50891	Cyclophilin-like
Eco28_RS19705	SSF56300	Metallo-dependent phosphatases
Eco28_RS19715	SSF52255	N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
Eco28_RS19720	SSF51246	Rudiment single hybrid motif
Eco28_RS19720	SSF52440	PreATP-grasp domain
Eco28_RS19720	SSF56059	Glutathione synthetase ATP-binding domain-like
Eco28_RS19725	SSF53633	Carbamate kinase-like
Eco28_RS19740	SSF52210	Succinyl-CoA synthetase domains
Eco28_RS19745	SSF89733	L-sulfolactate dehydrogenase-like
Eco28_RS19750	SSF53187	Zn-dependent exopeptidases
Eco28_RS19750	SSF55031	Bacterial exopeptidase dimerisation domain
Eco28_RS19755	SSF51182	RmlC-like cupins
Eco28_RS19760	SSF110738	Glycerate kinase I
Eco28_RS19770	SSF51338	Composite domain of metallo-dependent hydrolases
Eco28_RS19770	SSF51556	Metallo-dependent hydrolases
Eco28_RS19780	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Eco28_RS19780	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS19785	SSF51658	Xylose isomerase-like
Eco28_RS19790	SSF52467	DHS-like NAD/FAD-binding domain
Eco28_RS19790	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Eco28_RS19795	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS19795	SSF55781	GAF domain-like
Eco28_RS19800	SSF51182	RmlC-like cupins
Eco28_RS19805	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS19805	SSF53850	Periplasmic binding protein-like II
Eco28_RS19810	SSF52821	Rhodanese/Cell cycle control phosphatase
Eco28_RS19815	SSF46689	Homeodomain-like
Eco28_RS19835	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS19840	SSF52266	SGNH hydrolase
Eco28_RS19845	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS19850	SSF48452	TPR-like
Eco28_RS19850	SSF52833	Thioredoxin-like
Eco28_RS19860	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS19865	SSF117892	Band 7/SPFH domain
Eco28_RS19870	SSF141322	NfeD domain-like
Eco28_RS19880	SSF54523	Pili subunits
Eco28_RS19900	SSF46955	Putative DNA-binding domain
Eco28_RS19905	SSF51230	Single hybrid motif
Eco28_RS19910	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS19910	SSF90123	ABC transporter transmembrane region
Eco28_RS19920	SSF56954	Outer membrane efflux proteins (OEP)
Eco28_RS19930	SSF56601	beta-lactamase/transpeptidase-like
Eco28_RS19935	SSF55008	HMA, heavy metal-associated domain
Eco28_RS19935	SSF56784	HAD-like
Eco28_RS19935	SSF81653	Calcium ATPase, transduction domain A
Eco28_RS19935	SSF81665	Calcium ATPase, transmembrane domain M
Eco28_RS19940	SSF47413	lambda repressor-like DNA-binding domains
Eco28_RS19955	SSF55826	YbaK/ProRS associated domain
Eco28_RS19960	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
Eco28_RS19960	SSF56300	Metallo-dependent phosphatases
Eco28_RS19970	SSF103473	MFS general substrate transporter
Eco28_RS19975	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS19980	SSF53613	Ribokinase-like
Eco28_RS19985	SSF53474	alpha/beta-Hydrolases
Eco28_RS19990	SSF53800	Chelatase
Eco28_RS19995	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS20005	SSF110942	HSP90 C-terminal domain
Eco28_RS20005	SSF54211	Ribosomal protein S5 domain 2-like
Eco28_RS20005	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Eco28_RS20010	SSF111304	Recombination protein RecR
Eco28_RS20015	SSF82607	YbaB-like
Eco28_RS20020	SSF48019	post-AAA+ oligomerization domain-like
Eco28_RS20020	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS20025	SSF53271	PRTase-like
Eco28_RS20050	SSF50182	Sm-like ribonucleoproteins
Eco28_RS20050	SSF81665	Calcium ATPase, transmembrane domain M
Eco28_RS20050	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
Eco28_RS20050	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
Eco28_RS20070	SSF46689	Homeodomain-like
Eco28_RS20075	SSF111369	HlyD-like secretion proteins
Eco28_RS20080	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Eco28_RS20080	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Eco28_RS20080	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Eco28_RS20090	SSF68989	Hemolysin expression modulating protein HHA
Eco28_RS20095	SSF51161	Trimeric LpxA-like enzymes
Eco28_RS20105	SSF141868	EAL domain-like
Eco28_RS20110	SSF54909	Dimeric alpha+beta barrel
Eco28_RS20120	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
Eco28_RS20130	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Eco28_RS20135	SSF111352	Ammonium transporter
Eco28_RS20140	SSF54913	GlnB-like
Eco28_RS20145	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS20145	SSF90123	ABC transporter transmembrane region
Eco28_RS20150	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS20150	SSF90123	ABC transporter transmembrane region
Eco28_RS20155	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS20155	SSF54909	Dimeric alpha+beta barrel
Eco28_RS20160	SSF56784	HAD-like
Eco28_RS20165	SSF53850	Periplasmic binding protein-like II
Eco28_RS20170	SSF52402	Adenine nucleotide alpha hydrolases-like
Eco28_RS20175	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Eco28_RS20180	SSF47781	RuvA domain 2-like
Eco28_RS20185	SSF109998	Triger factor/SurA peptide-binding domain-like
Eco28_RS20185	SSF54534	FKBP-like
Eco28_RS20190	SSF47729	IHF-like DNA-binding proteins
Eco28_RS20195	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS20195	SSF54211	Ribosomal protein S5 domain 2-like
Eco28_RS20195	SSF88697	PUA domain-like
Eco28_RS20200	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS20200	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Eco28_RS20205	SSF52096	ClpP/crotonase
Eco28_RS20210	SSF102735	Trigger factor ribosome-binding domain
Eco28_RS20210	SSF109998	Triger factor/SurA peptide-binding domain-like
Eco28_RS20210	SSF54534	FKBP-like
Eco28_RS20220	SSF82657	BolA-like
Eco28_RS20235	SSF103473	MFS general substrate transporter
Eco28_RS20240	SSF49503	Cupredoxins
Eco28_RS20240	SSF81464	Cytochrome c oxidase subunit II-like, transmembrane region
Eco28_RS20245	SSF81442	Cytochrome c oxidase subunit I-like
Eco28_RS20250	SSF81452	Cytochrome c oxidase subunit III-like
Eco28_RS20265	SSF103473	MFS general substrate transporter
Eco28_RS20270	SSF89963	YajQ-like
Eco28_RS20275	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Eco28_RS20275	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS20280	SSF52317	Class I glutamine amidotransferase-like
Eco28_RS20285	SSF143437	THUMP domain-like
Eco28_RS20285	SSF52402	Adenine nucleotide alpha hydrolases-like
Eco28_RS20285	SSF52821	Rhodanese/Cell cycle control phosphatase
Eco28_RS20295	SSF116842	XseB-like
Eco28_RS20300	SSF48576	Terpenoid synthases
Eco28_RS20305	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Eco28_RS20305	SSF52922	TK C-terminal domain-like
Eco28_RS20310	SSF51430	NAD(P)-linked oxidoreductase
Eco28_RS20315	SSF141571	Pentapeptide repeat-like
Eco28_RS20320	SSF101307	YutG-like
Eco28_RS20325	SSF55326	PurM N-terminal domain-like
Eco28_RS20325	SSF56042	PurM C-terminal domain-like
Eco28_RS20330	SSF48013	NusB-like
Eco28_RS20335	SSF52121	Lumazine synthase
Eco28_RS20340	SSF53597	Dihydrofolate reductase-like
Eco28_RS20340	SSF53927	Cytidine deaminase-like
Eco28_RS20355	SSF111364	Tsx-like channel
Eco28_RS20365	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Eco28_RS20370	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Eco28_RS20380	SSF51713	tRNA-guanine transglycosylase
Eco28_RS20385	SSF111337	QueA-like
Eco28_RS20400	SSF51011	Glycosyl hydrolase domain
Eco28_RS20400	SSF51445	(Trans)glycosidases
Eco28_RS20400	SSF81296	E set domains
Eco28_RS20415	SSF47384	Homodimeric domain of signal transducing histidine kinase
Eco28_RS20415	SSF55785	PYP-like sensor domain (PAS domain)
Eco28_RS20415	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Eco28_RS20420	SSF52172	CheY-like
Eco28_RS20425	SSF56300	Metallo-dependent phosphatases
Eco28_RS20430	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS20435	SSF103473	MFS general substrate transporter
Eco28_RS20440	SSF53067	Actin-like ATPase domain
Eco28_RS20460	SSF51182	RmlC-like cupins
Eco28_RS20480	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS20490	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Eco28_RS20490	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS20495	SSF55073	Nucleotide cyclase
Eco28_RS20505	SSF53649	Alkaline phosphatase-like
Eco28_RS20520	SSF52440	PreATP-grasp domain
Eco28_RS20520	SSF56059	Glutathione synthetase ATP-binding domain-like
Eco28_RS20540	SSF90123	ABC transporter transmembrane region
Eco28_RS20550	SSF56601	beta-lactamase/transpeptidase-like
Eco28_RS20555	SSF51206	cAMP-binding domain-like
Eco28_RS20560	SSF103515	Autotransporter
Eco28_RS20560	SSF51126	Pectin lyase-like
Eco28_RS20575	SSF51569	Aldolase
Eco28_RS20580	SSF51197	Clavaminate synthase-like
Eco28_RS20585	SSF161098	MetI-like
Eco28_RS20590	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS20595	SSF53850	Periplasmic binding protein-like II
Eco28_RS20600	SSF46894	C-terminal effector domain of the bipartite response regulators
Eco28_RS20600	SSF52172	CheY-like
Eco28_RS20605	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Eco28_RS20610	SSF103473	MFS general substrate transporter
Eco28_RS20615	SSF53850	Periplasmic binding protein-like II
Eco28_RS20620	SSF161098	MetI-like
Eco28_RS20625	SSF50331	MOP-like
Eco28_RS20625	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS20635	SSF50129	GroES-like
Eco28_RS20635	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS20640	SSF53474	alpha/beta-Hydrolases
Eco28_RS20650	SSF103473	MFS general substrate transporter
Eco28_RS20655	SSF51569	Aldolase
Eco28_RS20655	SSF89000	post-HMGL domain-like
Eco28_RS20660	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS20660	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Eco28_RS20665	SSF56529	FAH
Eco28_RS20670	SSF53474	alpha/beta-Hydrolases
Eco28_RS20675	SSF53098	Ribonuclease H-like
Eco28_RS20680	SSF53213	LigB-like
Eco28_RS20685	SSF51905	FAD/NAD(P)-binding domain
Eco28_RS20690	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS20690	SSF55781	GAF domain-like
Eco28_RS20695	SSF56281	Metallo-hydrolase/oxidoreductase
Eco28_RS20700	SSF46689	Homeodomain-like
Eco28_RS20700	SSF52317	Class I glutamine amidotransferase-like
Eco28_RS20705	SSF47413	lambda repressor-like DNA-binding domains
Eco28_RS20705	SSF53822	Periplasmic binding protein-like I
Eco28_RS20715	SSF49303	beta-Galactosidase/glucuronidase domain
Eco28_RS20715	SSF49785	Galactose-binding domain-like
Eco28_RS20715	SSF51445	(Trans)glycosidases
Eco28_RS20715	SSF74650	Galactose mutarotase-like
Eco28_RS20720	SSF103473	MFS general substrate transporter
Eco28_RS20725	SSF51161	Trimeric LpxA-like enzymes
Eco28_RS20730	SSF103473	MFS general substrate transporter
Eco28_RS20735	SSF47413	lambda repressor-like DNA-binding domains
Eco28_RS20735	SSF55234	Cyanase C-terminal domain
Eco28_RS20740	SSF53056	beta-carbonic anhydrase, cab
Eco28_RS20745	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS20745	SSF53850	Periplasmic binding protein-like II
Eco28_RS20750	SSF51338	Composite domain of metallo-dependent hydrolases
Eco28_RS20750	SSF51556	Metallo-dependent hydrolases
Eco28_RS20760	SSF56801	Acetyl-CoA synthetase-like
Eco28_RS20765	SSF103378	2-methylcitrate dehydratase PrpD
Eco28_RS20770	SSF48256	Citrate synthase
Eco28_RS20775	SSF51621	Phosphoenolpyruvate/pyruvate domain
Eco28_RS20780	SSF159800	PrpR receptor domain-like
Eco28_RS20780	SSF46689	Homeodomain-like
Eco28_RS20780	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS20785	SSF159871	YdgH-like
Eco28_RS20805	SSF50129	GroES-like
Eco28_RS20805	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS20820	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS20825	SSF53822	Periplasmic binding protein-like I
Eco28_RS20830	SSF88697	PUA domain-like
Eco28_RS20835	SSF51338	Composite domain of metallo-dependent hydrolases
Eco28_RS20835	SSF51556	Metallo-dependent hydrolases
Eco28_RS20840	SSF53633	Carbamate kinase-like
Eco28_RS20855	SSF52210	Succinyl-CoA synthetase domains
Eco28_RS20865	SSF48403	Ankyrin repeat
Eco28_RS20880	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS20880	SSF53850	Periplasmic binding protein-like II
Eco28_RS20885	SSF141868	EAL domain-like
Eco28_RS20885	SSF46894	C-terminal effector domain of the bipartite response regulators
Eco28_RS20905	SSF46689	Homeodomain-like
Eco28_RS20905	SSF48498	Tetracyclin repressor-like, C-terminal domain
Eco28_RS20910	SSF53720	ALDH-like
Eco28_RS20915	SSF51905	FAD/NAD(P)-binding domain
Eco28_RS20915	SSF54373	FAD-linked reductases, C-terminal domain
Eco28_RS20935	SSF46894	C-terminal effector domain of the bipartite response regulators
Eco28_RS20945	SSF103515	Autotransporter
Eco28_RS20945	SSF51126	Pectin lyase-like
Eco28_RS20965	SSF100950	NagB/RpiA/CoA transferase-like
Eco28_RS20970	SSF100950	NagB/RpiA/CoA transferase-like
Eco28_RS20970	SSF46548	alpha-helical ferredoxin
Eco28_RS20980	SSF46689	Homeodomain-like
Eco28_RS20980	SSF51182	RmlC-like cupins
Eco28_RS20985	SSF51905	FAD/NAD(P)-binding domain
Eco28_RS20985	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
Eco28_RS20990	SSF159871	YdgH-like
Eco28_RS21005	SSF46689	Homeodomain-like
Eco28_RS21005	SSF55136	Probable bacterial effector-binding domain
Eco28_RS21010	SSF49373	Invasin/intimin cell-adhesion fragments
Eco28_RS21015	SSF51430	NAD(P)-linked oxidoreductase
Eco28_RS21020	SSF51430	NAD(P)-linked oxidoreductase
Eco28_RS21025	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS21025	SSF53850	Periplasmic binding protein-like II
Eco28_RS21030	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS21030	SSF53850	Periplasmic binding protein-like II
Eco28_RS21035	SSF53474	alpha/beta-Hydrolases
Eco28_RS21040	SSF51395	FMN-linked oxidoreductases
Eco28_RS21055	SSF143800	L28p-like
Eco28_RS21060	SSF57840	Ribosomal protein L36
Eco28_RS21075	SSF46894	C-terminal effector domain of the bipartite response regulators
Eco28_RS21085	SSF49354	PapD-like
Eco28_RS21090	SSF49464	Carboxypeptidase regulatory domain-like
Eco28_RS21100	SSF49354	PapD-like
Eco28_RS21120	SSF47741	CO dehydrogenase ISP C-domain like
Eco28_RS21120	SSF54292	2Fe-2S ferredoxin-like
Eco28_RS21125	SSF55447	CO dehydrogenase flavoprotein C-terminal domain-like
Eco28_RS21125	SSF56176	FAD-binding/transporter-associated domain-like
Eco28_RS21130	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
Eco28_RS21130	SSF56003	Molybdenum cofactor-binding domain
Eco28_RS21140	SSF53850	Periplasmic binding protein-like II
Eco28_RS21145	SSF56349	DNA breaking-rejoining enzymes
Eco28_RS21165	SSF143737	YeeU-like
Eco28_RS21175	SSF102712	JAB1/MPN domain
Eco28_RS21190	SSF54786	YcfA/nrd intein domain
Eco28_RS21195	SSF103515	Autotransporter
Eco28_RS21195	SSF51126	Pectin lyase-like
Eco28_RS21200	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS21220	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS21235	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS21265	SSF51556	Metallo-dependent hydrolases
Eco28_RS21275	SSF53098	Ribonuclease H-like
Eco28_RS21285	SSF52317	Class I glutamine amidotransferase-like
Eco28_RS21290	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS21290	SSF53613	Ribokinase-like
Eco28_RS21320	SSF48557	L-aspartase-like
Eco28_RS21330	SSF53681	Aspartate/glutamate racemase
Eco28_RS21335	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS21335	SSF53850	Periplasmic binding protein-like II
Eco28_RS21350	SSF103473	MFS general substrate transporter
Eco28_RS21355	SSF51604	Enolase C-terminal domain-like
Eco28_RS21355	SSF54826	Enolase N-terminal domain-like
Eco28_RS21360	SSF51569	Aldolase
Eco28_RS21370	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS21370	SSF48008	GntR ligand-binding domain-like
Eco28_RS21390	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS21400	SSF46689	Homeodomain-like
Eco28_RS21415	SSF103473	MFS general substrate transporter
Eco28_RS21420	SSF47413	lambda repressor-like DNA-binding domains
Eco28_RS21420	SSF53822	Periplasmic binding protein-like I
Eco28_RS21425	SSF53590	Nucleoside hydrolase
Eco28_RS21450	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Eco28_RS21475	SSF53187	Zn-dependent exopeptidases
Eco28_RS21475	SSF55031	Bacterial exopeptidase dimerisation domain
Eco28_RS21480	SSF48557	L-aspartase-like
Eco28_RS21490	SSF53774	Glutaminase/Asparaginase
Eco28_RS21495	SSF52172	CheY-like
Eco28_RS21555	SSF53720	ALDH-like
Eco28_RS21560	SSF53633	Carbamate kinase-like
Eco28_RS21560	SSF88697	PUA domain-like
Eco28_RS21565	SSF56935	Porins
Eco28_RS21575	SSF53474	alpha/beta-Hydrolases
Eco28_RS21580	SSF53271	PRTase-like
Eco28_RS21585	SSF53187	Zn-dependent exopeptidases
Eco28_RS21590	SSF75620	Release factor
Eco28_RS21595	SSF103365	Hypothetical protein PH1602
Eco28_RS21600	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Eco28_RS21605	SSF100879	Lesion bypass DNA polymerase (Y-family), little finger domain
Eco28_RS21605	SSF56672	DNA/RNA polymerases
Eco28_RS21610	SSF103088	OmpA-like
Eco28_RS21620	SSF143422	Transposase IS200-like
Eco28_RS21630	SSF54001	Cysteine proteinases
Eco28_RS21640	SSF143011	RelE-like
Eco28_RS21645	SSF141523	L,D-transpeptidase catalytic domain-like
Eco28_RS21650	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Eco28_RS21655	SSF53697	SIS domain
Eco28_RS21660	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Eco28_RS21660	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Eco28_RS21665	SSF89872	Inhibitor of vertebrate lysozyme, Ivy
Eco28_RS21670	SSF56317	Carbon-nitrogen hydrolase
Eco28_RS21685	SSF46689	Homeodomain-like
Eco28_RS21700	SSF81901	HCP-like
Eco28_RS21710	SSF69255	gp5 N-terminal domain-like
Eco28_RS21710	SSF69279	Phage tail proteins
Eco28_RS21710	SSF69349	Phage fibre proteins
Eco28_RS21720	SSF141452	Hcp1-like
Eco28_RS21740	SSF160719	gpW/gp25-like
Eco28_RS21755	SSF49879	SMAD/FHA domain
Eco28_RS21790	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS21800	SSF141452	Hcp1-like
Eco28_RS21835	SSF53098	Ribonuclease H-like
Eco28_RS21840	SSF53098	Ribonuclease H-like
Eco28_RS21845	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS21850	SSF56281	Metallo-hydrolase/oxidoreductase
Eco28_RS21855	SSF53955	Lysozyme-like
Eco28_RS21855	SSF54106	LysM domain
Eco28_RS21860	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS21865	SSF56219	DNase I-like
Eco28_RS21870	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS21870	SSF53850	Periplasmic binding protein-like II
Eco28_RS21875	SSF51430	NAD(P)-linked oxidoreductase
Eco28_RS21910	SSF56784	HAD-like
Eco28_RS21915	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS21915	SSF55021	ACT-like
Eco28_RS21920	SSF161098	MetI-like
Eco28_RS21925	SSF53850	Periplasmic binding protein-like II
Eco28_RS21935	SSF118196	YaeB-like
Eco28_RS21940	SSF52954	Class II aaRS ABD-related
Eco28_RS21940	SSF55681	Class II aaRS and biotin synthetases
Eco28_RS21940	SSF55826	YbaK/ProRS associated domain
Eco28_RS21945	SSF54001	Cysteine proteinases
Eco28_RS21955	SSF75620	Release factor
Eco28_RS21960	SSF52980	Restriction endonuclease-like
Eco28_RS21970	SSF101744	Rof/RNase P subunit-like
Eco28_RS21975	SSF52402	Adenine nucleotide alpha hydrolases-like
Eco28_RS21975	SSF56037	PheT/TilS domain
Eco28_RS21975	SSF82829	MesJ substrate recognition domain-like
Eco28_RS21980	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Eco28_RS21985	SSF53383	PLP-dependent transferases
Eco28_RS21985	SSF55904	Ornithine decarboxylase C-terminal domain
Eco28_RS21990	SSF52096	ClpP/crotonase
Eco28_RS21995	SSF89550	PHP domain-like
Eco28_RS22000	SSF53098	Ribonuclease H-like
Eco28_RS22005	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Eco28_RS22010	SSF51161	Trimeric LpxA-like enzymes
Eco28_RS22015	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Eco28_RS22020	SSF51161	Trimeric LpxA-like enzymes
Eco28_RS22025	SSF111384	OmpH-like
Eco28_RS22035	SSF50156	PDZ domain-like
Eco28_RS22045	SSF64005	Undecaprenyl diphosphate synthase
Eco28_RS22050	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS22050	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Eco28_RS22050	SSF69055	1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
Eco28_RS22055	SSF55194	Ribosome recycling factor, RRF
Eco28_RS22060	SSF53633	Carbamate kinase-like
Eco28_RS22065	SSF46934	UBA-like
Eco28_RS22065	SSF54713	Elongation factor Ts (EF-Ts), dimerisation domain
Eco28_RS22075	SSF52313	Ribosomal protein S2
Eco28_RS22085	SSF55920	Creatinase/aminopeptidase
Eco28_RS22090	SSF109604	HD-domain/PDEase-like
Eco28_RS22090	SSF55021	ACT-like
Eco28_RS22090	SSF81301	Nucleotidyltransferase
Eco28_RS22090	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
Eco28_RS22095	SSF51161	Trimeric LpxA-like enzymes
Eco28_RS22110	SSF50156	PDZ domain-like
Eco28_RS22110	SSF50494	Trypsin-like serine proteases
Eco28_RS22120	SSF109604	HD-domain/PDEase-like
Eco28_RS22125	SSF53167	Purine and uridine phosphorylases
Eco28_RS22130	SSF53807	"Helical backbone" metal receptor
Eco28_RS22140	SSF89360	HesB-like domain
Eco28_RS22145	SSF81340	Clc chloride channel
Eco28_RS22150	SSF53383	PLP-dependent transferases
Eco28_RS22155	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Eco28_RS22160	SSF53807	"Helical backbone" metal receptor
Eco28_RS22165	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS22170	SSF56935	Porins
Eco28_RS22175	SSF53955	Lysozyme-like
Eco28_RS22175	SSF56601	beta-lactamase/transpeptidase-like
Eco28_RS22180	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS22185	SSF55144	LigT-like
Eco28_RS22195	SSF109635	DnaK suppressor protein DksA, alpha-hairpin domain
Eco28_RS22195	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Eco28_RS22200	SSF52374	Nucleotidylyl transferase
Eco28_RS22205	SSF81301	Nucleotidyltransferase
Eco28_RS22205	SSF81891	Poly A polymerase C-terminal region-like
Eco28_RS22210	SSF55083	6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
Eco28_RS22215	SSF49401	Bacterial adhesins
Eco28_RS22220	SSF49354	PapD-like
Eco28_RS22220	SSF49584	Periplasmic chaperone C-domain
Eco28_RS22225	SSF141729	FimD N-terminal domain-like
Eco28_RS22230	SSF49401	Bacterial adhesins
Eco28_RS22235	SSF49401	Bacterial adhesins
Eco28_RS22240	SSF49401	Bacterial adhesins
Eco28_RS22245	SSF49401	Bacterial adhesins
Eco28_RS22250	SSF51621	Phosphoenolpyruvate/pyruvate domain
Eco28_RS22255	SSF52374	Nucleotidylyl transferase
Eco28_RS22280	SSF50692	ADC-like
Eco28_RS22285	SSF88713	Glycoside hydrolase/deacetylase
Eco28_RS22290	SSF53062	PTS system fructose IIA component-like
Eco28_RS22300	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS22305	SSF53056	beta-carbonic anhydrase, cab
Eco28_RS22310	SSF53271	PRTase-like
Eco28_RS22315	SSF50998	Quinoprotein alcohol dehydrogenase-like
Eco28_RS22320	SSF49503	Cupredoxins
Eco28_RS22330	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS22335	SSF56276	S-adenosylmethionine decarboxylase
Eco28_RS22345	SSF52016	LeuD/IlvD-like
Eco28_RS22345	SSF53732	Aconitase iron-sulfur domain
Eco28_RS22345	SSF74778	Aconitase B, N-terminal domain
Eco28_RS22360	SSF51905	FAD/NAD(P)-binding domain
Eco28_RS22360	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
Eco28_RS22365	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
Eco28_RS22365	SSF51230	Single hybrid motif
Eco28_RS22365	SSF52777	CoA-dependent acyltransferases
Eco28_RS22370	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Eco28_RS22370	SSF52922	TK C-terminal domain-like
Eco28_RS22380	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS22380	SSF48008	GntR ligand-binding domain-like
Eco28_RS22390	SSF103473	MFS general substrate transporter
Eco28_RS22395	SSF75005	Arabinanase/levansucrase/invertase
Eco28_RS22405	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
Eco28_RS22410	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
Eco28_RS22410	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
Eco28_RS22420	SSF54523	Pili subunits
Eco28_RS22425	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS22435	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
Eco28_RS22440	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS22445	SSF160950	YacF-like
Eco28_RS22450	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Eco28_RS22455	SSF55811	Nudix
Eco28_RS22460	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS22460	SSF81767	Pre-protein crosslinking domain of SecA
Eco28_RS22460	SSF81886	Helical scaffold and wing domains of SecA
Eco28_RS22470	SSF54211	Ribosomal protein S5 domain 2-like
Eco28_RS22475	SSF52490	Tubulin nucleotide-binding domain-like
Eco28_RS22475	SSF55307	Tubulin C-terminal domain-like
Eco28_RS22480	SSF53067	Actin-like ATPase domain
Eco28_RS22490	SSF52440	PreATP-grasp domain
Eco28_RS22490	SSF56059	Glutathione synthetase ATP-binding domain-like
Eco28_RS22495	SSF51984	MurCD N-terminal domain
Eco28_RS22495	SSF53244	MurD-like peptide ligases, peptide-binding domain
Eco28_RS22495	SSF53623	MurD-like peptide ligases, catalytic domain
Eco28_RS22500	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Eco28_RS22510	SSF51984	MurCD N-terminal domain
Eco28_RS22510	SSF53244	MurD-like peptide ligases, peptide-binding domain
Eco28_RS22510	SSF53623	MurD-like peptide ligases, catalytic domain
Eco28_RS22520	SSF53244	MurD-like peptide ligases, peptide-binding domain
Eco28_RS22520	SSF53623	MurD-like peptide ligases, catalytic domain
Eco28_RS22520	SSF63418	MurE/MurF N-terminal domain
Eco28_RS22525	SSF53244	MurD-like peptide ligases, peptide-binding domain
Eco28_RS22525	SSF53623	MurD-like peptide ligases, catalytic domain
Eco28_RS22525	SSF63418	MurE/MurF N-terminal domain
Eco28_RS22530	SSF56519	Penicillin binding protein dimerisation domain
Eco28_RS22530	SSF56601	beta-lactamase/transpeptidase-like
Eco28_RS22540	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS22540	SSF81799	Putative methyltransferase TM0872, insert domain
Eco28_RS22545	SSF89447	AbrB/MazE/MraZ-like
Eco28_RS22555	SSF47413	lambda repressor-like DNA-binding domains
Eco28_RS22555	SSF53822	Periplasmic binding protein-like I
Eco28_RS22565	SSF55021	ACT-like
Eco28_RS22570	SSF52467	DHS-like NAD/FAD-binding domain
Eco28_RS22570	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Eco28_RS22575	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS22575	SSF53850	Periplasmic binding protein-like II
Eco28_RS22585	SSF110921	2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
Eco28_RS22585	SSF51569	Aldolase
Eco28_RS22590	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
Eco28_RS22595	SSF53732	Aconitase iron-sulfur domain
Eco28_RS22600	SSF52016	LeuD/IlvD-like
Eco28_RS22610	SSF53850	Periplasmic binding protein-like II
Eco28_RS22620	SSF53850	Periplasmic binding protein-like II
Eco28_RS22625	SSF161098	MetI-like
Eco28_RS22630	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS22640	SSF46689	Homeodomain-like
Eco28_RS22640	SSF51215	Regulatory protein AraC
Eco28_RS22650	SSF53067	Actin-like ATPase domain
Eco28_RS22655	SSF50443	FucI/AraA C-terminal domain-like
Eco28_RS22655	SSF53743	FucI/AraA N-terminal and middle domains
Eco28_RS22660	SSF53639	AraD/HMP-PK domain-like
Eco28_RS22665	SSF53098	Ribonuclease H-like
Eco28_RS22665	SSF56672	DNA/RNA polymerases
Eco28_RS22670	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS22675	SSF55120	Pseudouridine synthase
Eco28_RS22685	SSF46565	Chaperone J-domain
Eco28_RS22695	SSF109998	Triger factor/SurA peptide-binding domain-like
Eco28_RS22695	SSF54534	FKBP-like
Eco28_RS22700	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
Eco28_RS22705	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS22710	SSF110069	ApaG-like
Eco28_RS22715	SSF56300	Metallo-dependent phosphatases
Eco28_RS22720	SSF50118	Cell growth inhibitor/plasmid maintenance toxic component
Eco28_RS22730	SSF53597	Dihydrofolate reductase-like
Eco28_RS22735	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS22740	SSF52218	Flavoproteins
Eco28_RS22745	SSF103473	MFS general substrate transporter
Eco28_RS22750	SSF54862	4Fe-4S ferredoxins
Eco28_RS22755	SSF51905	FAD/NAD(P)-binding domain
Eco28_RS22755	SSF54373	FAD-linked reductases, C-terminal domain
Eco28_RS22760	SSF52402	Adenine nucleotide alpha hydrolases-like
Eco28_RS22760	SSF52467	DHS-like NAD/FAD-binding domain
Eco28_RS22765	SSF52402	Adenine nucleotide alpha hydrolases-like
Eco28_RS22775	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Eco28_RS22775	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Eco28_RS22780	SSF89796	CoA-transferase family III (CaiB/BaiF)
Eco28_RS22785	SSF56801	Acetyl-CoA synthetase-like
Eco28_RS22790	SSF52096	ClpP/crotonase
Eco28_RS22795	SSF51161	Trimeric LpxA-like enzymes
Eco28_RS22810	SSF48108	Carbamoyl phosphate synthetase, large subunit connection domain
Eco28_RS22810	SSF52335	Methylglyoxal synthase-like
Eco28_RS22810	SSF52440	PreATP-grasp domain
Eco28_RS22810	SSF56059	Glutathione synthetase ATP-binding domain-like
Eco28_RS22815	SSF52021	Carbamoyl phosphate synthetase, small subunit N-terminal domain
Eco28_RS22815	SSF52317	Class I glutamine amidotransferase-like
Eco28_RS22820	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS22820	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Eco28_RS22825	SSF53590	Nucleoside hydrolase
Eco28_RS22835	SSF54534	FKBP-like
Eco28_RS22845	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Eco28_RS22845	SSF50677	ValRS/IleRS/LeuRS editing domain
Eco28_RS22845	SSF52374	Nucleotidylyl transferase
Eco28_RS22850	SSF52374	Nucleotidylyl transferase
Eco28_RS22850	SSF82114	Riboflavin kinase-like
Eco28_RS22860	SSF46992	Ribosomal protein S20
Eco28_RS22875	SSF141571	Pentapeptide repeat-like
Eco28_RS22880	SSF49401	Bacterial adhesins
Eco28_RS22885	SSF49354	PapD-like
Eco28_RS22885	SSF49584	Periplasmic chaperone C-domain
Eco28_RS22890	SSF141729	FimD N-terminal domain-like
Eco28_RS22895	SSF49401	Bacterial adhesins
Eco28_RS22900	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS22900	SSF53850	Periplasmic binding protein-like II
Eco28_RS22915	SSF46565	Chaperone J-domain
Eco28_RS22915	SSF49493	HSP40/DnaJ peptide-binding domain
Eco28_RS22915	SSF57938	DnaJ/Hsp40 cysteine-rich domain
Eco28_RS22920	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
Eco28_RS22920	SSF100934	Heat shock protein 70kD (HSP70), C-terminal subdomain
Eco28_RS22920	SSF53067	Actin-like ATPase domain
Eco28_RS22940	SSF53218	Molybdenum cofactor biosynthesis proteins
Eco28_RS22945	SSF51569	Aldolase
Eco28_RS22965	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Eco28_RS22970	SSF54211	Ribosomal protein S5 domain 2-like
Eco28_RS22970	SSF55060	GHMP Kinase, C-terminal domain
Eco28_RS22975	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS22975	SSF53633	Carbamate kinase-like
Eco28_RS22975	SSF55021	ACT-like
Eco28_RS22975	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Eco28_RS22985	SSF75217	alpha/beta knot
Eco28_RS22995	SSF46894	C-terminal effector domain of the bipartite response regulators
Eco28_RS22995	SSF52172	CheY-like
Eco28_RS23005	SSF103190	Sensory domain-like
Eco28_RS23005	SSF47384	Homodimeric domain of signal transducing histidine kinase
Eco28_RS23005	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Eco28_RS23010	SSF46894	C-terminal effector domain of the bipartite response regulators
Eco28_RS23010	SSF52172	CheY-like
Eco28_RS23020	SSF46689	Homeodomain-like
Eco28_RS23020	SSF55136	Probable bacterial effector-binding domain
Eco28_RS23025	SSF53254	Phosphoglycerate mutase-like
Eco28_RS23030	SSF52972	ITPase-like
Eco28_RS23035	SSF48295	TrpR-like
Eco28_RS23040	SSF48435	Bacterial muramidases
Eco28_RS23040	SSF53955	Lysozyme-like
Eco28_RS23050	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS23055	SSF47413	lambda repressor-like DNA-binding domains
Eco28_RS23055	SSF52374	Nucleotidylyl transferase
Eco28_RS23055	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS23060	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS23060	SSF54211	Ribosomal protein S5 domain 2-like
Eco28_RS23065	SSF56784	HAD-like
Eco28_RS23075	SSF55681	Class II aaRS and biotin synthetases
Eco28_RS23075	SSF82649	SufE/NifU
Eco28_RS23080	SSF47413	lambda repressor-like DNA-binding domains
Eco28_RS23085	SSF53167	Purine and uridine phosphorylases
Eco28_RS23090	SSF143856	DeoB insert domain-like
Eco28_RS23090	SSF53649	Alkaline phosphatase-like
Eco28_RS23095	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
Eco28_RS23095	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
Eco28_RS23095	SSF54680	Pyrimidine nucleoside phosphorylase C-terminal domain
Eco28_RS23100	SSF51569	Aldolase
Eco28_RS23105	SSF51998	PFL-like glycyl radical enzymes
Eco28_RS23110	SSF102114	Radical SAM enzymes
Eco28_RS23110	SSF54862	4Fe-4S ferredoxins
Eco28_RS23115	SSF51556	Metallo-dependent hydrolases
Eco28_RS23120	SSF52151	FabD/lysophospholipase-like
Eco28_RS23135	SSF50447	Translation proteins
Eco28_RS23135	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS23135	SSF54980	EF-G C-terminal domain-like
Eco28_RS23140	SSF56784	HAD-like
Eco28_RS23145	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Eco28_RS23150	SSF102220	DNA polymerase III psi subunit
Eco28_RS23155	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS23185	SSF46894	C-terminal effector domain of the bipartite response regulators
Eco28_RS23190	SSF46894	C-terminal effector domain of the bipartite response regulators
Eco28_RS23210	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS23220	SSF53649	Alkaline phosphatase-like
Eco28_RS23225	SSF50129	GroES-like
Eco28_RS23225	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS23230	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS23230	SSF48008	GntR ligand-binding domain-like
Eco28_RS23235	SSF103473	MFS general substrate transporter
Eco28_RS23240	SSF47170	Aspartate receptor, ligand-binding domain
Eco28_RS23240	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Eco28_RS23265	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS23265	SSF90002	Hypothetical protein YjiA, C-terminal domain
Eco28_RS23285	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS23290	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS23295	SSF116734	DNA methylase specificity domain
Eco28_RS23315	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS23315	SSF53383	PLP-dependent transferases
Eco28_RS23325	SSF103473	MFS general substrate transporter
Eco28_RS23340	SSF53067	Actin-like ATPase domain
Eco28_RS23350	SSF141571	Pentapeptide repeat-like
Eco28_RS23360	SSF50956	Thermostable phytase (3-phytase)
Eco28_RS23365	SSF103473	MFS general substrate transporter
Eco28_RS23370	SSF49373	Invasin/intimin cell-adhesion fragments
Eco28_RS23375	SSF56399	ADP-ribosylation
Eco28_RS23395	SSF51338	Composite domain of metallo-dependent hydrolases
Eco28_RS23395	SSF51556	Metallo-dependent hydrolases
Eco28_RS23400	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS23400	SSF53850	Periplasmic binding protein-like II
Eco28_RS23405	SSF160719	gpW/gp25-like
Eco28_RS23420	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS23420	SSF48008	GntR ligand-binding domain-like
Eco28_RS23430	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Eco28_RS23430	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS23435	SSF51658	Xylose isomerase-like
Eco28_RS23450	SSF49401	Bacterial adhesins
Eco28_RS23455	SSF49401	Bacterial adhesins
Eco28_RS23460	SSF49401	Bacterial adhesins
Eco28_RS23465	SSF141729	FimD N-terminal domain-like
Eco28_RS23470	SSF49354	PapD-like
Eco28_RS23470	SSF49584	Periplasmic chaperone C-domain
Eco28_RS23485	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS23520	SSF58113	Apolipoprotein A-I
Eco28_RS23525	SSF103088	OmpA-like
Eco28_RS23545	SSF54211	Ribosomal protein S5 domain 2-like
Eco28_RS23565	SSF50129	GroES-like
Eco28_RS23565	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS23570	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS23580	SSF50129	GroES-like
Eco28_RS23580	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS23585	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS23595	SSF47413	lambda repressor-like DNA-binding domains
Eco28_RS23595	SSF53822	Periplasmic binding protein-like I
Eco28_RS23600	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS23615	SSF52949	Macro domain-like
Eco28_RS23615	SSF53187	Zn-dependent exopeptidases
Eco28_RS23620	SSF102400	DNA polymerase III chi subunit
Eco28_RS23625	SSF46589	tRNA-binding arm
Eco28_RS23625	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Eco28_RS23625	SSF50677	ValRS/IleRS/LeuRS editing domain
Eco28_RS23625	SSF52374	Nucleotidylyl transferase
Eco28_RS23635	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Eco28_RS23640	SSF89946	Hypothetical protein VC0424
Eco28_RS23645	SSF53671	Aspartate/ornithine carbamoyltransferase
Eco28_RS23655	SSF51197	Clavaminate synthase-like
Eco28_RS23660	SSF46689	Homeodomain-like
Eco28_RS23660	SSF48498	Tetracyclin repressor-like, C-terminal domain
Eco28_RS23665	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS23670	SSF55298	YjgF-like
Eco28_RS23685	SSF53671	Aspartate/ornithine carbamoyltransferase
Eco28_RS23690	SSF54893	Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain
Eco28_RS23690	SSF57825	Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
Eco28_RS23695	SSF55298	YjgF-like
Eco28_RS23700	SSF56784	HAD-like
Eco28_RS23700	SSF81653	Calcium ATPase, transduction domain A
Eco28_RS23700	SSF81660	Metal cation-transporting ATPase, ATP-binding domain N
Eco28_RS23700	SSF81665	Calcium ATPase, transmembrane domain M
Eco28_RS23705	SSF47413	lambda repressor-like DNA-binding domains
Eco28_RS23705	SSF53822	Periplasmic binding protein-like I
Eco28_RS23710	SSF55604	Glucose permease domain IIB
Eco28_RS23715	SSF51011	Glycosyl hydrolase domain
Eco28_RS23715	SSF51445	(Trans)glycosidases
Eco28_RS23720	SSF51998	PFL-like glycyl radical enzymes
Eco28_RS23725	SSF102114	Radical SAM enzymes
Eco28_RS23730	SSF47175	Cytochromes
Eco28_RS23735	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
Eco28_RS23740	SSF158710	PSPTO4464-like
Eco28_RS23745	SSF51984	MurCD N-terminal domain
Eco28_RS23745	SSF53244	MurD-like peptide ligases, peptide-binding domain
Eco28_RS23745	SSF53623	MurD-like peptide ligases, catalytic domain
Eco28_RS23750	SSF56655	Carbohydrate phosphatase
Eco28_RS23765	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS23770	SSF53822	Periplasmic binding protein-like I
Eco28_RS23775	SSF50324	Inorganic pyrophosphatase
Eco28_RS23780	SSF50118	Cell growth inhibitor/plasmid maintenance toxic component
Eco28_RS23785	SSF89447	AbrB/MazE/MraZ-like
Eco28_RS23790	SSF56349	DNA breaking-rejoining enzymes
Eco28_RS23795	SSF47413	lambda repressor-like DNA-binding domains
Eco28_RS23825	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS23840	SSF117892	Band 7/SPFH domain
Eco28_RS23860	SSF53067	Actin-like ATPase domain
Eco28_RS23870	SSF47413	lambda repressor-like DNA-binding domains
Eco28_RS23875	SSF88723	PIN domain-like
Eco28_RS23885	SSF46689	Homeodomain-like
Eco28_RS23920	SSF55166	Hedgehog/DD-peptidase
Eco28_RS23945	SSF69255	gp5 N-terminal domain-like
Eco28_RS23950	SSF160719	gpW/gp25-like
Eco28_RS23980	SSF88874	Receptor-binding domain of short tail fibre protein gp12
Eco28_RS23985	SSF46689	Homeodomain-like
Eco28_RS23985	SSF53041	Resolvase-like
Eco28_RS24020	SSF69279	Phage tail proteins
Eco28_RS24045	SSF110857	Gamma-glutamyl cyclotransferase-like
Eco28_RS24065	SSF55068	Peptide methionine sulfoxide reductase
Eco28_RS24070	SSF54631	CBS-domain pair
Eco28_RS24070	SSF56176	FAD-binding/transporter-associated domain-like
Eco28_RS24095	SSF56655	Carbohydrate phosphatase
Eco28_RS24100	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
Eco28_RS24100	SSF56300	Metallo-dependent phosphatases
Eco28_RS24105	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS24110	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS24115	SSF103481	Multidrug resistance efflux transporter EmrE
Eco28_RS24130	SSF54534	FKBP-like
Eco28_RS24155	SSF143422	Transposase IS200-like
Eco28_RS24170	SSF55653	Ribosomal protein L9 C-domain
Eco28_RS24170	SSF55658	L9 N-domain-like
Eco28_RS24175	SSF46911	Ribosomal protein S18
Eco28_RS24180	SSF50249	Nucleic acid-binding proteins
Eco28_RS24185	SSF54995	Ribosomal protein S6
Eco28_RS24190	SSF159871	YdgH-like
Eco28_RS24195	SSF53639	AraD/HMP-PK domain-like
Eco28_RS24200	SSF51658	Xylose isomerase-like
Eco28_RS24205	SSF51366	Ribulose-phoshate binding barrel
Eco28_RS24210	SSF55804	Phoshotransferase/anion transport protein
Eco28_RS24215	SSF52794	PTS system IIB component-like
Eco28_RS24225	SSF56281	Metallo-hydrolase/oxidoreductase
Eco28_RS24230	SSF100950	NagB/RpiA/CoA transferase-like
Eco28_RS24230	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS24235	SSF53474	alpha/beta-Hydrolases
Eco28_RS24240	SSF159871	YdgH-like
Eco28_RS24245	SSF159871	YdgH-like
Eco28_RS24250	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Eco28_RS24250	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Eco28_RS24255	SSF52440	PreATP-grasp domain
Eco28_RS24255	SSF56059	Glutathione synthetase ATP-binding domain-like
Eco28_RS24290	SSF55315	L30e-like
Eco28_RS24290	SSF75217	alpha/beta knot
Eco28_RS24295	SSF50249	Nucleic acid-binding proteins
Eco28_RS24300	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS24305	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS24315	SSF117892	Band 7/SPFH domain
Eco28_RS24320	SSF117892	Band 7/SPFH domain
Eco28_RS24325	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS24325	SSF54980	EF-G C-terminal domain-like
Eco28_RS24330	SSF50182	Sm-like ribonucleoproteins
Eco28_RS24335	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS24340	SSF118116	DNA mismatch repair protein MutL
Eco28_RS24340	SSF54211	Ribosomal protein S5 domain 2-like
Eco28_RS24340	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Eco28_RS24345	SSF53187	Zn-dependent exopeptidases
Eco28_RS24350	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS24355	SSF53613	Ribokinase-like
Eco28_RS24355	SSF64153	YjeF N-terminal domain-like
Eco28_RS24360	SSF46548	alpha-helical ferredoxin
Eco28_RS24380	SSF53098	Ribonuclease H-like
Eco28_RS24385	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS24395	SSF50182	Sm-like ribonucleoproteins
Eco28_RS24395	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
Eco28_RS24395	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
Eco28_RS24405	SSF55681	Class II aaRS and biotin synthetases
Eco28_RS24410	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
Eco28_RS24410	SSF51905	FAD/NAD(P)-binding domain
Eco28_RS24410	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Eco28_RS24415	SSF46548	alpha-helical ferredoxin
Eco28_RS24415	SSF54292	2Fe-2S ferredoxin-like
Eco28_RS24420	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
Eco28_RS24425	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
Eco28_RS24430	SSF56601	beta-lactamase/transpeptidase-like
Eco28_RS24435	SSF50814	Lipocalins
Eco28_RS24440	SSF103481	Multidrug resistance efflux transporter EmrE
Eco28_RS24455	SSF50104	Translation proteins SH3-like domain
Eco28_RS24455	SSF50249	Nucleic acid-binding proteins
Eco28_RS24460	SSF102114	Radical SAM enzymes
Eco28_RS24475	SSF48592	GroEL equatorial domain-like
Eco28_RS24475	SSF52029	GroEL apical domain-like
Eco28_RS24475	SSF54849	GroEL-intermediate domain like
Eco28_RS24480	SSF50129	GroES-like
Eco28_RS24495	SSF48557	L-aspartase-like
Eco28_RS24505	SSF54913	GlnB-like
Eco28_RS24510	SSF52833	Thioredoxin-like
Eco28_RS24510	SSF74863	Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha)
Eco28_RS24515	SSF46689	Homeodomain-like
Eco28_RS24515	SSF48498	Tetracyclin repressor-like, C-terminal domain
Eco28_RS24525	SSF56349	DNA breaking-rejoining enzymes
Eco28_RS24530	SSF47413	lambda repressor-like DNA-binding domains
Eco28_RS24530	SSF53822	Periplasmic binding protein-like I
Eco28_RS24535	SSF51445	(Trans)glycosidases
Eco28_RS24540	SSF103473	MFS general substrate transporter
Eco28_RS24545	SSF49899	Concanavalin A-like lectins/glucanases
Eco28_RS24545	SSF75005	Arabinanase/levansucrase/invertase
Eco28_RS24550	SSF56935	Porins
Eco28_RS24580	SSF46689	Homeodomain-like
Eco28_RS24585	SSF48295	TrpR-like
Eco28_RS24595	SSF101967	Adhesin YadA, collagen-binding domain
Eco28_RS24595	SSF54523	Pili subunits
Eco28_RS24635	SSF68989	Hemolysin expression modulating protein HHA
Eco28_RS24660	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS24665	SSF103515	Autotransporter
Eco28_RS24665	SSF51126	Pectin lyase-like
Eco28_RS24685	SSF102712	JAB1/MPN domain
Eco28_RS24700	SSF143737	YeeU-like
Eco28_RS24725	SSF47598	Ribbon-helix-helix
Eco28_RS24735	SSF56349	DNA breaking-rejoining enzymes
Eco28_RS24745	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS24745	SSF56024	Phospholipase D/nuclease
Eco28_RS24750	SSF53649	Alkaline phosphatase-like
Eco28_RS24755	SSF56925	OMPA-like
Eco28_RS24765	SSF49401	Bacterial adhesins
Eco28_RS24770	SSF49401	Bacterial adhesins
Eco28_RS24775	SSF49401	Bacterial adhesins
Eco28_RS24780	SSF49401	Bacterial adhesins
Eco28_RS24790	SSF49354	PapD-like
Eco28_RS24790	SSF49584	Periplasmic chaperone C-domain
Eco28_RS24795	SSF46689	Homeodomain-like
Eco28_RS24810	SSF141729	FimD N-terminal domain-like
Eco28_RS24820	SSF49401	Bacterial adhesins
Eco28_RS24825	SSF56112	Protein kinase-like (PK-like)
Eco28_RS24830	SSF56112	Protein kinase-like (PK-like)
Eco28_RS24840	SSF56112	Protein kinase-like (PK-like)
Eco28_RS24850	SSF46689	Homeodomain-like
Eco28_RS24850	SSF53041	Resolvase-like
Eco28_RS24865	SSF53098	Ribonuclease H-like
Eco28_RS24870	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS24880	SSF54909	Dimeric alpha+beta barrel
Eco28_RS24885	SSF55021	ACT-like
Eco28_RS24890	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS24895	SSF46689	Homeodomain-like
Eco28_RS24895	SSF48498	Tetracyclin repressor-like, C-terminal domain
Eco28_RS24900	SSF103473	MFS general substrate transporter
Eco28_RS24905	SSF46689	Homeodomain-like
Eco28_RS24910	SSF46689	Homeodomain-like
Eco28_RS24915	SSF53098	Ribonuclease H-like
Eco28_RS24920	SSF49401	Bacterial adhesins
Eco28_RS24950	SSF53738	Phosphoglucomutase, first 3 domains
Eco28_RS24955	SSF51717	Dihydropteroate synthetase-like
Eco28_RS24965	SSF53098	Ribonuclease H-like
Eco28_RS24970	SSF47454	A DNA-binding domain in eukaryotic transcription factors
Eco28_RS24970	SSF51182	RmlC-like cupins
Eco28_RS24975	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS24975	SSF56327	LDH C-terminal domain-like
Eco28_RS24980	SSF103473	MFS general substrate transporter
Eco28_RS24990	SSF117457	FumA C-terminal domain-like
Eco28_RS25010	SSF52172	CheY-like
Eco28_RS25015	SSF103190	Sensory domain-like
Eco28_RS25015	SSF55785	PYP-like sensor domain (PAS domain)
Eco28_RS25015	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Eco28_RS25015	SSF55890	Sporulation response regulatory protein Spo0B
Eco28_RS25025	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Eco28_RS25045	SSF50249	Nucleic acid-binding proteins
Eco28_RS25045	SSF55681	Class II aaRS and biotin synthetases
Eco28_RS25050	SSF103473	MFS general substrate transporter
Eco28_RS25055	SSF53383	PLP-dependent transferases
Eco28_RS25055	SSF55904	Ornithine decarboxylase C-terminal domain
Eco28_RS25070	SSF46894	C-terminal effector domain of the bipartite response regulators
Eco28_RS25100	SSF143737	YeeU-like
Eco28_RS25115	SSF102712	JAB1/MPN domain
Eco28_RS25130	SSF54786	YcfA/nrd intein domain
Eco28_RS25140	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS25175	SSF56935	Porins
Eco28_RS25215	SSF48657	FinO-like
Eco28_RS25235	SSF52922	TK C-terminal domain-like
Eco28_RS25245	SSF46689	Homeodomain-like
Eco28_RS25260	SSF53098	Ribonuclease H-like
Eco28_RS25265	SSF46689	Homeodomain-like
Eco28_RS25270	SSF53383	PLP-dependent transferases
Eco28_RS25270	SSF55904	Ornithine decarboxylase C-terminal domain
Eco28_RS25275	SSF46689	Homeodomain-like
Eco28_RS25280	SSF53098	Ribonuclease H-like
Eco28_RS25290	SSF53649	Alkaline phosphatase-like
Eco28_RS25295	SSF46894	C-terminal effector domain of the bipartite response regulators
Eco28_RS25295	SSF52172	CheY-like
Eco28_RS25300	SSF47384	Homodimeric domain of signal transducing histidine kinase
Eco28_RS25300	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Eco28_RS25310	SSF103473	MFS general substrate transporter
Eco28_RS25310	SSF103661	Proline/betaine transporter ProP, C-terminal cytoplasmic domain
Eco28_RS25320	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS25330	SSF57783	Zinc beta-ribbon
Eco28_RS25330	SSF82057	Prokaryotic SH3-related domain
Eco28_RS25335	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Eco28_RS25345	SSF53850	Periplasmic binding protein-like II
Eco28_RS25350	SSF161098	MetI-like
Eco28_RS25355	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS25355	SSF64288	Chorismate lyase-like
Eco28_RS25365	SSF159709	PhnH-like
Eco28_RS25380	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS25385	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS25390	SSF51338	Composite domain of metallo-dependent hydrolases
Eco28_RS25390	SSF51556	Metallo-dependent hydrolases
Eco28_RS25395	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS25400	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Eco28_RS25405	SSF56281	Metallo-hydrolase/oxidoreductase
Eco28_RS25415	SSF89623	Ribose/Galactose isomerase RpiB/AlsB
Eco28_RS25420	SSF55718	SCP-like
Eco28_RS25420	SSF56281	Metallo-hydrolase/oxidoreductase
Eco28_RS25430	SSF111369	HlyD-like secretion proteins
Eco28_RS25440	SSF56954	Outer membrane efflux proteins (OEP)
Eco28_RS25450	SSF81901	HCP-like
Eco28_RS25455	SSF118215	Proton glutamate symport protein
Eco28_RS25465	SSF48452	TPR-like
Eco28_RS25485	SSF54862	4Fe-4S ferredoxins
Eco28_RS25490	SSF48695	Multiheme cytochromes
Eco28_RS25495	SSF48695	Multiheme cytochromes
Eco28_RS25505	SSF56801	Acetyl-CoA synthetase-like
Eco28_RS25520	SSF141571	Pentapeptide repeat-like
Eco28_RS25550	SSF46955	Putative DNA-binding domain
Eco28_RS25555	SSF46689	Homeodomain-like
Eco28_RS25560	SSF141868	EAL domain-like
Eco28_RS25575	SSF50249	Nucleic acid-binding proteins
Eco28_RS25580	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS25585	SSF142906	YjbR-like
Eco28_RS25590	SSF111038	YjbQ-like
Eco28_RS25595	SSF56784	HAD-like
Eco28_RS25605	SSF53383	PLP-dependent transferases
Eco28_RS25610	SSF50621	Alanine racemase C-terminal domain-like
Eco28_RS25610	SSF51419	PLP-binding barrel
Eco28_RS25615	SSF48024	N-terminal domain of DnaB helicase
Eco28_RS25615	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS25620	SSF50129	GroES-like
Eco28_RS25620	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS25630	SSF51395	FMN-linked oxidoreductases
Eco28_RS25635	SSF143422	Transposase IS200-like
Eco28_RS25645	SSF143422	Transposase IS200-like
Eco28_RS25660	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS25665	SSF69047	Hypothetical protein YjbJ
Eco28_RS25675	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS25675	SSF51306	LexA/Signal peptidase
Eco28_RS25685	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
Eco28_RS25695	SSF64288	Chorismate lyase-like
Eco28_RS25705	SSF141571	Pentapeptide repeat-like
Eco28_RS25715	SSF56935	Porins
Eco28_RS25720	SSF50331	MOP-like
Eco28_RS25720	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS25730	SSF53850	Periplasmic binding protein-like II
Eco28_RS25735	SSF160964	MalF N-terminal region-like
Eco28_RS25735	SSF161098	MetI-like
Eco28_RS25740	SSF161098	MetI-like
Eco28_RS25750	SSF103473	MFS general substrate transporter
Eco28_RS25775	SSF159270	YmcC-like
Eco28_RS25785	SSF53098	Ribonuclease H-like
Eco28_RS25790	SSF53697	SIS domain
Eco28_RS25805	SSF53633	Carbamate kinase-like
Eco28_RS25805	SSF55021	ACT-like
Eco28_RS25810	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS25815	SSF81301	Nucleotidyltransferase
Eco28_RS25820	SSF117892	Band 7/SPFH domain
Eco28_RS25830	SSF51366	Ribulose-phoshate binding barrel
Eco28_RS25835	SSF56784	HAD-like
Eco28_RS25840	SSF100950	NagB/RpiA/CoA transferase-like
Eco28_RS25840	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS25850	SSF55120	Pseudouridine synthase
Eco28_RS25850	SSF55174	Alpha-L RNA-binding motif
Eco28_RS25860	SSF100950	NagB/RpiA/CoA transferase-like
Eco28_RS25860	SSF46689	Homeodomain-like
Eco28_RS25865	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS25870	SSF53062	PTS system fructose IIA component-like
Eco28_RS25875	SSF52728	PTS IIb component
Eco28_RS25890	SSF50129	GroES-like
Eco28_RS25890	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS25895	SSF52317	Class I glutamine amidotransferase-like
Eco28_RS25900	SSF109755	PhoU-like
Eco28_RS25905	SSF47644	Methionine synthase domain
Eco28_RS25905	SSF51717	Dihydropteroate synthetase-like
Eco28_RS25905	SSF52242	Cobalamin (vitamin B12)-binding domain
Eco28_RS25905	SSF56507	Methionine synthase activation domain-like
Eco28_RS25905	SSF82282	Homocysteine S-methyltransferase
Eco28_RS25910	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS25910	SSF55781	GAF domain-like
Eco28_RS25915	SSF48403	Ankyrin repeat
Eco28_RS25925	SSF51621	Phosphoenolpyruvate/pyruvate domain
Eco28_RS25930	SSF51645	Malate synthase G
Eco28_RS25935	SSF52317	Class I glutamine amidotransferase-like
Eco28_RS25940	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Eco28_RS25975	SSF52335	Methylglyoxal synthase-like
Eco28_RS25975	SSF53927	Cytidine deaminase-like
Eco28_RS25980	SSF51246	Rudiment single hybrid motif
Eco28_RS25980	SSF52440	PreATP-grasp domain
Eco28_RS25980	SSF56059	Glutathione synthetase ATP-binding domain-like
Eco28_RS25985	SSF46689	Homeodomain-like
Eco28_RS25985	SSF52172	CheY-like
Eco28_RS25985	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS25990	SSF103190	Sensory domain-like
Eco28_RS25990	SSF47384	Homodimeric domain of signal transducing histidine kinase
Eco28_RS25990	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Eco28_RS26010	SSF47729	IHF-like DNA-binding proteins
Eco28_RS26025	SSF51726	UROD/MetE-like
Eco28_RS26030	SSF55811	Nudix
Eco28_RS26045	SSF51391	Thiamin phosphate synthase
Eco28_RS26050	SSF69572	Activating enzymes of the ubiquitin-like proteins
Eco28_RS26055	SSF54285	MoaD/ThiS
Eco28_RS26060	SSF110399	ThiG-like
Eco28_RS26065	SSF102114	Radical SAM enzymes
Eco28_RS26075	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
Eco28_RS26080	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
Eco28_RS26085	SSF48300	Ribosomal protein L7/12, oligomerisation (N-terminal) domain
Eco28_RS26085	SSF54736	ClpS-like
Eco28_RS26090	SSF160369	Ribosomal protein L10-like
Eco28_RS26100	SSF56808	Ribosomal protein L1
Eco28_RS26105	SSF46906	Ribosomal protein L11, C-terminal domain
Eco28_RS26105	SSF54747	Ribosomal L11/L12e N-terminal domain
Eco28_RS26110	SSF50104	Translation proteins SH3-like domain
Eco28_RS26110	SSF82679	N-utilization substance G protein NusG, N-terminal domain
Eco28_RS26120	SSF50447	Translation proteins
Eco28_RS26120	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
Eco28_RS26120	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS26155	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS26160	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS26160	SSF50037	C-terminal domain of transcriptional repressors
Eco28_RS26160	SSF55681	Class II aaRS and biotin synthetases
Eco28_RS26165	SSF56176	FAD-binding/transporter-associated domain-like
Eco28_RS26165	SSF56194	Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
Eco28_RS26195	SSF53681	Aspartate/glutamate racemase
Eco28_RS26200	SSF56935	Porins
Eco28_RS26205	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS26215	SSF46689	Homeodomain-like
Eco28_RS26220	SSF103473	MFS general substrate transporter
Eco28_RS26225	SSF53187	Zn-dependent exopeptidases
Eco28_RS26225	SSF55031	Bacterial exopeptidase dimerisation domain
Eco28_RS26230	SSF51905	FAD/NAD(P)-binding domain
Eco28_RS26230	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
Eco28_RS26235	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS26235	SSF53850	Periplasmic binding protein-like II
Eco28_RS26240	SSF48557	L-aspartase-like
Eco28_RS26245	SSF53633	Carbamate kinase-like
Eco28_RS26250	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS26250	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Eco28_RS26255	SSF53187	Zn-dependent exopeptidases
Eco28_RS26255	SSF55031	Bacterial exopeptidase dimerisation domain
Eco28_RS26260	SSF51621	Phosphoenolpyruvate/pyruvate domain
Eco28_RS26265	SSF53649	Alkaline phosphatase-like
Eco28_RS26270	SSF46689	Homeodomain-like
Eco28_RS26275	SSF52794	PTS system IIB component-like
Eco28_RS26280	SSF102114	Radical SAM enzymes
Eco28_RS26280	SSF54862	4Fe-4S ferredoxins
Eco28_RS26285	SSF51998	PFL-like glycyl radical enzymes
Eco28_RS26290	SSF52794	PTS system IIB component-like
Eco28_RS26300	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
Eco28_RS26300	SSF51621	Phosphoenolpyruvate/pyruvate domain
Eco28_RS26300	SSF52009	Phosphohistidine domain
Eco28_RS26300	SSF55594	HPr-like
Eco28_RS26300	SSF55804	Phoshotransferase/anion transport protein
Eco28_RS26305	SSF51569	Aldolase
Eco28_RS26310	SSF56796	Dehydroquinate synthase-like
Eco28_RS26320	SSF103481	Multidrug resistance efflux transporter EmrE
Eco28_RS26325	SSF48113	Heme-dependent peroxidases
Eco28_RS26330	SSF51730	FAD-linked oxidoreductase
Eco28_RS26340	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS26340	SSF53633	Carbamate kinase-like
Eco28_RS26340	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Eco28_RS26345	SSF53383	PLP-dependent transferases
Eco28_RS26355	SSF47598	Ribbon-helix-helix
Eco28_RS26360	SSF54001	Cysteine proteinases
Eco28_RS26365	SSF143800	L28p-like
Eco28_RS26370	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS26375	SSF47413	lambda repressor-like DNA-binding domains
Eco28_RS26375	SSF53822	Periplasmic binding protein-like I
Eco28_RS26380	SSF110997	Sporulation related repeat
Eco28_RS26385	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Eco28_RS26390	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS26400	SSF89562	RraA-like
Eco28_RS26420	SSF81338	Aquaporin-like
Eco28_RS26425	SSF53067	Actin-like ATPase domain
Eco28_RS26430	SSF56655	Carbohydrate phosphatase
Eco28_RS26435	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
Eco28_RS26435	SSF63380	Riboflavin synthase domain-like
Eco28_RS26440	SSF52402	Adenine nucleotide alpha hydrolases-like
Eco28_RS26465	SSF51351	Triosephosphate isomerase (TIM)
Eco28_RS26470	SSF54197	HIT-like
Eco28_RS26475	SSF53850	Periplasmic binding protein-like II
Eco28_RS26480	SSF53784	Phosphofructokinase
Eco28_RS26485	SSF160240	Cation efflux protein cytoplasmic domain-like
Eco28_RS26485	SSF161111	Cation efflux protein transmembrane domain-like
Eco28_RS26495	SSF69279	Phage tail proteins
Eco28_RS26530	SSF46689	Homeodomain-like
Eco28_RS26530	SSF53041	Resolvase-like
Eco28_RS26540	SSF53098	Ribonuclease H-like
Eco28_RS26545	SSF46894	C-terminal effector domain of the bipartite response regulators
Eco28_RS26550	SSF56601	beta-lactamase/transpeptidase-like
Eco28_RS26560	SSF51717	Dihydropteroate synthetase-like
Eco28_RS26565	SSF103481	Multidrug resistance efflux transporter EmrE
Eco28_RS26570	SSF81301	Nucleotidyltransferase
Eco28_RS26575	SSF53597	Dihydrofolate reductase-like
Eco28_RS26580	SSF56349	DNA breaking-rejoining enzymes
Eco28_RS26585	SSF53098	Ribonuclease H-like
Eco28_RS26615	SSF88874	Receptor-binding domain of short tail fibre protein gp12
Eco28_RS26630	SSF160719	gpW/gp25-like
Eco28_RS26665	SSF53955	Lysozyme-like
Eco28_RS26710	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS26720	SSF110849	ParB/Sulfiredoxin
Eco28_RS26735	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Eco28_RS26765	SSF47413	lambda repressor-like DNA-binding domains
Eco28_RS26770	SSF56349	DNA breaking-rejoining enzymes
Eco28_RS26780	SSF52172	CheY-like
Eco28_RS26785	SSF47384	Homodimeric domain of signal transducing histidine kinase
Eco28_RS26785	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Eco28_RS26790	SSF50800	PK beta-barrel domain-like
Eco28_RS26805	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
Eco28_RS26805	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
Eco28_RS26815	SSF46689	Homeodomain-like
Eco28_RS26815	SSF51182	RmlC-like cupins
Eco28_RS26820	SSF46689	Homeodomain-like
Eco28_RS26820	SSF51215	Regulatory protein AraC
Eco28_RS26825	SSF53067	Actin-like ATPase domain
Eco28_RS26830	SSF51658	Xylose isomerase-like
Eco28_RS26835	SSF53639	AraD/HMP-PK domain-like
Eco28_RS26840	SSF54909	Dimeric alpha+beta barrel
Eco28_RS26845	SSF56935	Porins
Eco28_RS26850	SSF55804	Phoshotransferase/anion transport protein
Eco28_RS26860	SSF101821	Aminopeptidase/glucanase lid domain
Eco28_RS26860	SSF53187	Zn-dependent exopeptidases
Eco28_RS26865	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS26865	SSF55804	Phoshotransferase/anion transport protein
Eco28_RS26875	SSF53927	Cytidine deaminase-like
Eco28_RS26885	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Eco28_RS26890	SSF50692	ADC-like
Eco28_RS26890	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Eco28_RS26895	SSF54862	4Fe-4S ferredoxins
Eco28_RS26900	SSF81342	Transmembrane di-heme cytochromes
Eco28_RS26905	SSF144020	FdhE-like
Eco28_RS26935	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Eco28_RS26935	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Eco28_RS26940	SSF69500	DTD-like
Eco28_RS26950	SSF56784	HAD-like
Eco28_RS26955	SSF100950	NagB/RpiA/CoA transferase-like
Eco28_RS26955	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS26960	SSF53613	Ribokinase-like
Eco28_RS26965	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Eco28_RS26965	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS26970	SSF51569	Aldolase
Eco28_RS26975	SSF48208	Six-hairpin glycosidases
Eco28_RS26980	SSF74650	Galactose mutarotase-like
Eco28_RS26990	SSF51011	Glycosyl hydrolase domain
Eco28_RS26990	SSF51445	(Trans)glycosidases
Eco28_RS26990	SSF74650	Galactose mutarotase-like
Eco28_RS26995	SSF103473	MFS general substrate transporter
Eco28_RS27000	SSF103473	MFS general substrate transporter
Eco28_RS27005	SSF56935	Porins
Eco28_RS27010	SSF103473	MFS general substrate transporter
Eco28_RS27015	SSF51658	Xylose isomerase-like
Eco28_RS27020	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS27020	SSF64288	Chorismate lyase-like
Eco28_RS27025	SSF50447	Translation proteins
Eco28_RS27025	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS27025	SSF54980	EF-G C-terminal domain-like
Eco28_RS27035	SSF54368	Glutamine synthetase, N-terminal domain
Eco28_RS27035	SSF55931	Glutamine synthetase/guanido kinase
Eco28_RS27040	SSF47384	Homodimeric domain of signal transducing histidine kinase
Eco28_RS27040	SSF55785	PYP-like sensor domain (PAS domain)
Eco28_RS27040	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Eco28_RS27045	SSF46689	Homeodomain-like
Eco28_RS27045	SSF52172	CheY-like
Eco28_RS27045	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS27055	SSF102114	Radical SAM enzymes
Eco28_RS27065	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS27070	SSF47807	5' to 3' exonuclease, C-terminal subdomain
Eco28_RS27070	SSF53098	Ribonuclease H-like
Eco28_RS27070	SSF56672	DNA/RNA polymerases
Eco28_RS27070	SSF88723	PIN domain-like
Eco28_RS27080	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
Eco28_RS27090	SSF52833	Thioredoxin-like
Eco28_RS27095	SSF56112	Protein kinase-like (PK-like)
Eco28_RS27105	SSF53448	Nucleotide-diphospho-sugar transferases
Eco28_RS27110	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS27140	SSF52218	Flavoproteins
Eco28_RS27150	SSF54211	Ribosomal protein S5 domain 2-like
Eco28_RS27150	SSF54980	EF-G C-terminal domain-like
Eco28_RS27155	SSF55920	Creatinase/aminopeptidase
Eco28_RS27160	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Eco28_RS27160	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS27160	SSF52096	ClpP/crotonase
Eco28_RS27165	SSF53901	Thiolase-like
Eco28_RS27170	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
Eco28_RS27170	SSF63380	Riboflavin synthase domain-like
Eco28_RS27175	SSF143968	UbiD C-terminal domain-like
Eco28_RS27175	SSF50475	FMN-binding split barrel
Eco28_RS27180	SSF82679	N-utilization substance G protein NusG, N-terminal domain
Eco28_RS27185	SSF51556	Metallo-dependent hydrolases
Eco28_RS27205	SSF56112	Protein kinase-like (PK-like)
Eco28_RS27210	SSF55718	SCP-like
Eco28_RS27215	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS27225	SSF53167	Purine and uridine phosphorylases
Eco28_RS27230	SSF53474	alpha/beta-Hydrolases
Eco28_RS27235	SSF51726	UROD/MetE-like
Eco28_RS27240	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS27240	SSF53850	Periplasmic binding protein-like II
Eco28_RS27245	SSF103481	Multidrug resistance efflux transporter EmrE
Eco28_RS27250	SSF56784	HAD-like
Eco28_RS27255	SSF53474	alpha/beta-Hydrolases
Eco28_RS27270	SSF47819	HRDC-like
Eco28_RS27270	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS27275	SSF56931	Outer membrane phospholipase A (OMPLA)
Eco28_RS27280	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Eco28_RS27285	SSF103481	Multidrug resistance efflux transporter EmrE
Eco28_RS27300	SSF144083	Magnesium transport protein CorA, transmembrane region
Eco28_RS27315	SSF143865	CorA soluble domain-like
Eco28_RS27315	SSF144083	Magnesium transport protein CorA, transmembrane region
Eco28_RS27320	SSF101852	Bacterial fluorinating enzyme, C-terminal domain
Eco28_RS27320	SSF102522	Bacterial fluorinating enzyme, N-terminal domain
Eco28_RS27325	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS27330	SSF56784	HAD-like
Eco28_RS27335	SSF47823	lambda integrase-like, N-terminal domain
Eco28_RS27335	SSF56349	DNA breaking-rejoining enzymes
Eco28_RS27345	SSF54506	Diaminopimelate epimerase-like
Eco28_RS27355	SSF55387	Frataxin/Nqo15-like
Eco28_RS27370	SSF53850	Periplasmic binding protein-like II
Eco28_RS27370	SSF54782	Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
Eco28_RS27375	SSF69618	HemD-like
Eco28_RS27385	SSF48452	TPR-like
Eco28_RS27390	SSF53649	Alkaline phosphatase-like
Eco28_RS27395	SSF102114	Radical SAM enzymes
Eco28_RS27445	SSF53383	PLP-dependent transferases
Eco28_RS27450	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Eco28_RS27460	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Eco28_RS27460	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS27460	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
Eco28_RS27465	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Eco28_RS27470	SSF160355	Bacterial polysaccharide co-polymerase-like
Eco28_RS27485	SSF50249	Nucleic acid-binding proteins
Eco28_RS27485	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS27485	SSF68912	Rho N-terminal domain-like
Eco28_RS27495	SSF52833	Thioredoxin-like
Eco28_RS27500	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS27510	SSF109604	HD-domain/PDEase-like
Eco28_RS27510	SSF53067	Actin-like ATPase domain
Eco28_RS27515	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS27525	SSF54534	FKBP-like
Eco28_RS27530	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Eco28_RS27530	SSF51735	NAD(P)-binding Rossmann-fold domains
Eco28_RS27535	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS27535	SSF53850	Periplasmic binding protein-like II
Eco28_RS27540	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Eco28_RS27540	SSF55021	ACT-like
Eco28_RS27545	SSF143975	IlvD/EDD N-terminal domain-like
Eco28_RS27545	SSF52016	LeuD/IlvD-like
Eco28_RS27550	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
Eco28_RS27555	SSF55021	ACT-like
Eco28_RS27560	SSF52467	DHS-like NAD/FAD-binding domain
Eco28_RS27560	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Eco28_RS27570	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS27570	SSF54211	Ribosomal protein S5 domain 2-like
Eco28_RS27580	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS27580	SSF53850	Periplasmic binding protein-like II
Eco28_RS27615	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS27615	SSF48008	GntR ligand-binding domain-like
Eco28_RS27620	SSF103473	MFS general substrate transporter
Eco28_RS27625	SSF47413	lambda repressor-like DNA-binding domains
Eco28_RS27625	SSF53822	Periplasmic binding protein-like I
Eco28_RS27630	SSF53613	Ribokinase-like
Eco28_RS27635	SSF53822	Periplasmic binding protein-like I
Eco28_RS27645	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS27650	SSF102546	RbsD-like
Eco28_RS27660	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS27665	SSF53300	vWA-like
Eco28_RS27670	SSF55681	Class II aaRS and biotin synthetases
Eco28_RS27675	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS27675	SSF54909	Dimeric alpha+beta barrel
Eco28_RS27680	SSF52218	Flavoproteins
Eco28_RS27685	SSF51905	FAD/NAD(P)-binding domain
Eco28_RS27690	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Eco28_RS27700	SSF81336	F1F0 ATP synthase subunit A
Eco28_RS27705	SSF81333	F1F0 ATP synthase subunit C
Eco28_RS27710	SSF81573	F1F0 ATP synthase subunit B, membrane domain
Eco28_RS27715	SSF47928	N-terminal domain of the delta subunit of the F1F0-ATP synthase
Eco28_RS27720	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
Eco28_RS27720	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
Eco28_RS27720	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS27725	SSF52943	ATP synthase (F1-ATPase), gamma subunit
Eco28_RS27730	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
Eco28_RS27730	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
Eco28_RS27730	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS27735	SSF46604	Epsilon subunit of F1F0-ATP synthase C-terminal domain
Eco28_RS27735	SSF51344	Epsilon subunit of F1F0-ATP synthase N-terminal domain
Eco28_RS27740	SSF51161	Trimeric LpxA-like enzymes
Eco28_RS27740	SSF53448	Nucleotide-diphospho-sugar transferases
Eco28_RS27745	SSF53697	SIS domain
Eco28_RS27745	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Eco28_RS27755	SSF53850	Periplasmic binding protein-like II
Eco28_RS27760	SSF161098	MetI-like
Eco28_RS27765	SSF161098	MetI-like
Eco28_RS27770	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS27775	SSF109755	PhoU-like
Eco28_RS27800	SSF141571	Pentapeptide repeat-like
Eco28_RS27810	SSF56784	HAD-like
Eco28_RS27820	SSF52218	Flavoproteins
Eco28_RS27830	SSF46785	"Winged helix" DNA-binding domain
Eco28_RS27830	SSF53850	Periplasmic binding protein-like II
Eco28_RS27835	SSF103473	MFS general substrate transporter
Eco28_RS27845	SSF53383	PLP-dependent transferases
Eco28_RS27860	SSF116878	TrmE connector domain
Eco28_RS27860	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Eco28_RS27875	SSF54211	Ribosomal protein S5 domain 2-like