A4R38_RS00005	SM01007	Class II Aldolase and Adducin N-terminal domain
A4R38_RS00015	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
A4R38_RS00040	SM00420	helix_turn_helix, Deoxyribose operon repressor
A4R38_RS00040	SM01134	A4R38_RS00040
A4R38_RS00105	SM00967	RNA 2'-O ribose methyltransferase substrate binding
A4R38_RS00110	SM00316	Ribosomal protein S1-like RNA-binding domain
A4R38_RS00110	SM00357	Cold shock protein domain
A4R38_RS00110	SM00955	A4R38_RS00110
A4R38_RS00120	SM00788	Adenylosuccinate synthetase
A4R38_RS00130	SM00244	prohibitin homologues
A4R38_RS00135	SM00244	prohibitin homologues
A4R38_RS00155	SM00853	MutL C terminal dimerisation domain
A4R38_RS00155	SM01340	A4R38_RS00155
A4R38_RS00160	SM00646	A4R38_RS00160
A4R38_RS00195	SM00479	A4R38_RS00195
A4R38_RS00275	SM00841	Elongation factor P, C-terminal
A4R38_RS00275	SM01185	A4R38_RS00275
A4R38_RS00300	SM00883	Chaperonin 10 Kd subunit
A4R38_RS00345	SM00862	Transcriptional regulatory protein, C terminal
A4R38_RS00385	SM00869	Autotransporter beta-domain
A4R38_RS00390	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS00395	SM00869	Autotransporter beta-domain
A4R38_RS00425	SM00091	PAS domain
A4R38_RS00425	SM00387	Histidine kinase-like ATPases
A4R38_RS00430	SM00448	cheY-homologous receiver domain
A4R38_RS00465	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS00475	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS00490	SM00448	cheY-homologous receiver domain
A4R38_RS00490	SM00862	Transcriptional regulatory protein, C terminal
A4R38_RS00495	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A4R38_RS00495	SM00387	Histidine kinase-like ATPases
A4R38_RS00495	SM00388	His Kinase A (phosphoacceptor) domain
A4R38_RS00530	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS00545	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4R38_RS00545	SM00866	A4R38_RS00545
A4R38_RS00570	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS00575	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS00585	SM00072	Guanylate kinase homologues.
A4R38_RS00620	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS00640	SM00849	Metallo-beta-lactamase superfamily
A4R38_RS00665	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A4R38_RS00690	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS00695	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS00700	SM00671	Sel1-like repeats.
A4R38_RS00710	SM00028	Tetratricopeptide repeats
A4R38_RS00785	SM00422	helix_turn_helix, mercury resistance
A4R38_RS00790	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS00795	SM00052	Putative diguanylate phosphodiesterase
A4R38_RS00830	SM00387	Histidine kinase-like ATPases
A4R38_RS00835	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS00835	SM00448	cheY-homologous receiver domain
A4R38_RS00850	SM00881	CoA binding domain
A4R38_RS00870	SM00861	Transketolase, pyrimidine binding domain
A4R38_RS00890	SM01005	Alanine racemase, C-terminal domain
A4R38_RS00895	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS00900	SM00354	helix_turn _helix lactose operon repressor
A4R38_RS00905	SM00882	Coenzyme A transferase
A4R38_RS00925	SM00829	Enoylreductase
A4R38_RS00965	SM00563	Phosphate acyltransferases
A4R38_RS00990	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS01065	SM00363	S4 RNA-binding domain
A4R38_RS01075	SM00822	A4R38_RS01075
A4R38_RS01125	SM01018	B12 binding domain
A4R38_RS01130	SM00346	helix_turn_helix isocitrate lyase regulation
A4R38_RS01195	SM00798	AICARFT/IMPCHase bienzyme
A4R38_RS01195	SM00851	MGS-like domain
A4R38_RS01200	SM01209	A4R38_RS01200
A4R38_RS01200	SM01210	A4R38_RS01200
A4R38_RS01205	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS01205	SM00448	cheY-homologous receiver domain
A4R38_RS01210	SM00387	Histidine kinase-like ATPases
A4R38_RS01210	SM00388	His Kinase A (phosphoacceptor) domain
A4R38_RS01225	SM00411	bacterial (prokaryotic) histone like domain
A4R38_RS01280	SM00876	Biotin and Thiamin Synthesis associated domain
A4R38_RS01285	SM00663	RNA polymerase I subunit A N-terminus
A4R38_RS01310	SM00649	Ribosomal protein L11/L12
A4R38_RS01315	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
A4R38_RS01315	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
A4R38_RS01450	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A4R38_RS01470	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS01575	SM00487	DEAD-like helicases superfamily
A4R38_RS01575	SM00490	helicase superfamily c-terminal domain
A4R38_RS01580	SM00354	helix_turn _helix lactose operon repressor
A4R38_RS01595	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS01595	SM01086	C-terminal, D2-small domain, of ClpB protein
A4R38_RS01685	SM00448	cheY-homologous receiver domain
A4R38_RS01685	SM00862	Transcriptional regulatory protein, C terminal
A4R38_RS01690	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A4R38_RS01690	SM00387	Histidine kinase-like ATPases
A4R38_RS01690	SM00388	His Kinase A (phosphoacceptor) domain
A4R38_RS01720	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS01725	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS01745	SM01007	Class II Aldolase and Adducin N-terminal domain
A4R38_RS01800	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A4R38_RS01855	SM00530	Helix-turn-helix XRE-family like proteins 
A4R38_RS01890	SM00420	helix_turn_helix, Deoxyribose operon repressor
A4R38_RS01890	SM01134	A4R38_RS01890
A4R38_RS01905	SM01133	A4R38_RS01905
A4R38_RS01955	SM01230	A4R38_RS01955
A4R38_RS01960	SM00091	PAS domain
A4R38_RS01960	SM00387	Histidine kinase-like ATPases
A4R38_RS01960	SM00388	His Kinase A (phosphoacceptor) domain
A4R38_RS01965	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS01965	SM00448	cheY-homologous receiver domain
A4R38_RS01975	SM00729	Elongator protein 3, MiaB family, Radical SAM
A4R38_RS01990	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
A4R38_RS01990	SM00474	3'-5' exonuclease
A4R38_RS01990	SM00475	5'-3' exonuclease
A4R38_RS01990	SM00482	DNA polymerase A domain
A4R38_RS02000	SM00563	Phosphate acyltransferases
A4R38_RS02095	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
A4R38_RS02140	SM00346	helix_turn_helix isocitrate lyase regulation
A4R38_RS02230	SM00861	Transketolase, pyrimidine binding domain
A4R38_RS02285	SM00341	Helicase and RNase D C-terminal
A4R38_RS02285	SM00487	DEAD-like helicases superfamily
A4R38_RS02285	SM00490	helicase superfamily c-terminal domain
A4R38_RS02285	SM00956	A4R38_RS02285
A4R38_RS02365	SM01219	A4R38_RS02365
A4R38_RS02475	SM00984	UDP binding domain
A4R38_RS02500	SM00357	Cold shock protein domain
A4R38_RS02500	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS02500	SM00959	Rho termination factor, N-terminal domain
A4R38_RS02515	SM00487	DEAD-like helicases superfamily
A4R38_RS02515	SM00490	helicase superfamily c-terminal domain
A4R38_RS02575	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS02620	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4R38_RS02620	SM00895	A4R38_RS02620
A4R38_RS02630	SM00354	helix_turn _helix lactose operon repressor
A4R38_RS02650	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS02665	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS02670	SM00327	von Willebrand factor (vWF) type A domain
A4R38_RS02680	SM00344	helix_turn_helix ASNC type
A4R38_RS02690	SM01228	A4R38_RS02690
A4R38_RS02735	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS02770	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS02780	SM01061	CAT RNA binding domain
A4R38_RS02875	SM01234	A4R38_RS02875
A4R38_RS02890	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS02890	SM00760	Bacterial dnaA protein helix-turn-helix domain
A4R38_RS02895	SM00480	DNA polymerase III beta subunit
A4R38_RS02905	SM00387	Histidine kinase-like ATPases
A4R38_RS02905	SM00433	TopoisomeraseII
A4R38_RS02930	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4R38_RS02930	SM00895	A4R38_RS02930
A4R38_RS02945	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
A4R38_RS02985	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS03045	SM00421	helix_turn_helix, Lux Regulon
A4R38_RS03045	SM00448	cheY-homologous receiver domain
A4R38_RS03050	SM00387	Histidine kinase-like ATPases
A4R38_RS03080	SM00530	Helix-turn-helix XRE-family like proteins 
A4R38_RS03190	SM00869	Autotransporter beta-domain
A4R38_RS03255	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS03370	SM00354	helix_turn _helix lactose operon repressor
A4R38_RS03455	SM00487	DEAD-like helicases superfamily
A4R38_RS03455	SM00490	helicase superfamily c-terminal domain
A4R38_RS03465	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A4R38_RS03465	SM00954	Region found in RelA / SpoT proteins
A4R38_RS03470	SM01409	A4R38_RS03470
A4R38_RS03475	SM00072	Guanylate kinase homologues.
A4R38_RS03480	SM00532	Ligase N family
A4R38_RS03535	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
A4R38_RS03535	SM01232	A4R38_RS03535
A4R38_RS03625	SM00829	Enoylreductase
A4R38_RS03650	SM00450	Rhodanese Homology Domain
A4R38_RS03670	SM00971	Serine acetyltransferase, N-terminal
A4R38_RS03685	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4R38_RS03685	SM00895	A4R38_RS03685
A4R38_RS03780	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS03785	SM01007	Class II Aldolase and Adducin N-terminal domain
A4R38_RS03795	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
A4R38_RS03835	SM00346	helix_turn_helix isocitrate lyase regulation
A4R38_RS03850	SM00642	Alpha-amylase domain
A4R38_RS03855	SM00047	Lysozyme subfamily 2
A4R38_RS03860	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS03870	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS03935	SM00357	Cold shock protein domain
A4R38_RS03940	SM00530	Helix-turn-helix XRE-family like proteins 
A4R38_RS04020	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS04025	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS04110	SM00028	Tetratricopeptide repeats
A4R38_RS04115	SM00052	Putative diguanylate phosphodiesterase
A4R38_RS04115	SM00267	diguanylate cyclase
A4R38_RS04140	SM00052	Putative diguanylate phosphodiesterase
A4R38_RS04165	SM00421	helix_turn_helix, Lux Regulon
A4R38_RS04175	SM01235	A4R38_RS04175
A4R38_RS04185	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS04190	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS04235	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS04255	SM00729	Elongator protein 3, MiaB family, Radical SAM
A4R38_RS04285	SM00421	helix_turn_helix, Lux Regulon
A4R38_RS04365	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS04405	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4R38_RS04405	SM00866	A4R38_RS04405
A4R38_RS04415	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS04420	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS04495	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS04495	SM00962	SRP54-type protein, GTPase domain
A4R38_RS04495	SM00963	SRP54-type protein, helical bundle domain
A4R38_RS04500	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS04550	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS04555	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS04580	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS04620	SM00354	helix_turn _helix lactose operon repressor
A4R38_RS04635	SM00487	DEAD-like helicases superfamily
A4R38_RS04635	SM00490	helicase superfamily c-terminal domain
A4R38_RS04650	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A4R38_RS04655	SM00642	Alpha-amylase domain
A4R38_RS04660	SM00642	Alpha-amylase domain
A4R38_RS04700	SM00450	Rhodanese Homology Domain
A4R38_RS04710	SM00420	helix_turn_helix, Deoxyribose operon repressor
A4R38_RS04710	SM01134	A4R38_RS04710
A4R38_RS04725	SM00421	helix_turn_helix, Lux Regulon
A4R38_RS04775	SM00899	A4R38_RS04775
A4R38_RS04780	SM00316	Ribosomal protein S1-like RNA-binding domain
A4R38_RS04780	SM00732	Likely ribonuclease with RNase H fold.
A4R38_RS04790	SM00448	cheY-homologous receiver domain
A4R38_RS04790	SM00862	Transcriptional regulatory protein, C terminal
A4R38_RS04795	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A4R38_RS04795	SM00387	Histidine kinase-like ATPases
A4R38_RS04795	SM00388	His Kinase A (phosphoacceptor) domain
A4R38_RS04830	SM00363	S4 RNA-binding domain
A4R38_RS04875	SM00965	Secretin and TonB N terminus short domain
A4R38_RS05015	SM00100	Cyclic nucleotide-monophosphate binding domain
A4R38_RS05015	SM00419	helix_turn_helix, cAMP Regulatory protein
A4R38_RS05045	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS05110	SM00838	Elongation factor G C-terminus
A4R38_RS05110	SM00889	Elongation factor G, domain IV
A4R38_RS05120	SM00495	Chitin-binding domain type 3
A4R38_RS05180	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS05205	SM01403	A4R38_RS05205
A4R38_RS05225	SM01382	A4R38_RS05225
A4R38_RS05225	SM01383	A4R38_RS05225
A4R38_RS05240	SM00322	K homology RNA-binding domain
A4R38_RS05260	SM01374	A4R38_RS05260
A4R38_RS05265	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
A4R38_RS05330	SM00363	S4 RNA-binding domain
A4R38_RS05330	SM01390	A4R38_RS05330
A4R38_RS05335	SM00662	RNA polymerases D
A4R38_RS05350	SM00422	helix_turn_helix, mercury resistance
A4R38_RS05455	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS05470	SM00062	Bacterial periplasmic substrate-binding proteins
A4R38_RS05540	SM00420	helix_turn_helix, Deoxyribose operon repressor
A4R38_RS05540	SM01134	A4R38_RS05540
A4R38_RS05555	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS05575	SM00878	Biotin carboxylase C-terminal domain
A4R38_RS05595	SM00829	Enoylreductase
A4R38_RS05600	SM00052	Putative diguanylate phosphodiesterase
A4R38_RS05600	SM00267	diguanylate cyclase
A4R38_RS05630	SM00316	Ribosomal protein S1-like RNA-binding domain
A4R38_RS05685	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A4R38_RS05690	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A4R38_RS05725	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4R38_RS05725	SM00895	A4R38_RS05725
A4R38_RS05730	SM01130	A4R38_RS05730
A4R38_RS05765	SM00729	Elongator protein 3, MiaB family, Radical SAM
A4R38_RS05770	SM00073	Histidine Phosphotransfer domain
A4R38_RS05770	SM00091	PAS domain
A4R38_RS05770	SM00387	Histidine kinase-like ATPases
A4R38_RS05770	SM00388	His Kinase A (phosphoacceptor) domain
A4R38_RS05770	SM00448	cheY-homologous receiver domain
A4R38_RS05815	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS05845	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS05920	SM01103	A4R38_RS05920
A4R38_RS05930	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS05980	SM00316	Ribosomal protein S1-like RNA-binding domain
A4R38_RS06000	SM01387	A4R38_RS06000
A4R38_RS06005	SM00316	Ribosomal protein S1-like RNA-binding domain
A4R38_RS06005	SM00322	K homology RNA-binding domain
A4R38_RS06010	SM00028	Tetratricopeptide repeats
A4R38_RS06015	SM00487	DEAD-like helicases superfamily
A4R38_RS06015	SM00490	helicase superfamily c-terminal domain
A4R38_RS06055	SM00465	GIY-YIG type nucleases (URI domain)
A4R38_RS06070	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A4R38_RS06080	SM00749	bacterial OsmY and nodulation domain
A4R38_RS06165	SM00420	helix_turn_helix, Deoxyribose operon repressor
A4R38_RS06165	SM01134	A4R38_RS06165
A4R38_RS06180	SM00858	A4R38_RS06180
A4R38_RS06325	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4R38_RS06325	SM00895	A4R38_RS06325
A4R38_RS06340	SM00858	A4R38_RS06340
A4R38_RS06390	SM00530	Helix-turn-helix XRE-family like proteins 
A4R38_RS06420	SM01038	Beta galactosidase small chain
A4R38_RS06425	SM00354	helix_turn _helix lactose operon repressor
A4R38_RS06440	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A4R38_RS06440	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A4R38_RS06470	SM00400	zinc finger
A4R38_RS06470	SM00493	A4R38_RS06470
A4R38_RS06470	SM00766	DNA primase DnaG DnaB-binding
A4R38_RS06505	SM01207	A4R38_RS06505
A4R38_RS06510	SM00905	Dihydroneopterin aldolase
A4R38_RS06525	SM00287	Bacterial SH3 domain homologues
A4R38_RS06535	SM01118	A4R38_RS06535
A4R38_RS06555	SM00244	prohibitin homologues
A4R38_RS06670	SM00387	Histidine kinase-like ATPases
A4R38_RS06670	SM00433	TopoisomeraseII
A4R38_RS06680	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS06730	SM00387	Histidine kinase-like ATPases
A4R38_RS06730	SM00388	His Kinase A (phosphoacceptor) domain
A4R38_RS06735	SM00448	cheY-homologous receiver domain
A4R38_RS06735	SM00862	Transcriptional regulatory protein, C terminal
A4R38_RS06745	SM00871	Bacterial transcription activator, effector binding domain
A4R38_RS06755	SM00434	DNA Topoisomerase IV
A4R38_RS06760	SM00563	Phosphate acyltransferases
A4R38_RS06800	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4R38_RS06800	SM00895	A4R38_RS06800
A4R38_RS06805	SM00729	Elongator protein 3, MiaB family, Radical SAM
A4R38_RS06835	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS07015	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4R38_RS07015	SM00895	A4R38_RS07015
A4R38_RS07055	SM01276	A4R38_RS07055
A4R38_RS07080	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS07130	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS07180	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS07270	SM00869	Autotransporter beta-domain
A4R38_RS07350	SM01130	A4R38_RS07350
A4R38_RS07385	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4R38_RS07385	SM00895	A4R38_RS07385
A4R38_RS07530	SM00869	Autotransporter beta-domain
A4R38_RS07555	SM01006	Siderophore biosynthesis protein domain
A4R38_RS07660	SM00347	helix_turn_helix multiple antibiotic resistance protein
A4R38_RS07670	SM00028	Tetratricopeptide repeats
A4R38_RS07710	SM00478	endonuclease III
A4R38_RS07735	SM00870	A4R38_RS07735
A4R38_RS07745	SM00729	Elongator protein 3, MiaB family, Radical SAM
A4R38_RS07755	SM01152	A4R38_RS07755
A4R38_RS07770	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS07775	SM00732	Likely ribonuclease with RNase H fold.
A4R38_RS07800	SM00731	SprT homologues.
A4R38_RS07850	SM00861	Transketolase, pyrimidine binding domain
A4R38_RS07855	SM00244	prohibitin homologues
A4R38_RS07890	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS07895	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS07915	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
A4R38_RS08000	SM01011	Aminopeptidase P, N-terminal domain
A4R38_RS08035	SM01022	A4R38_RS08035
A4R38_RS08080	SM00937	A4R38_RS08080
A4R38_RS08135	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
A4R38_RS08140	SM01092	CO dehydrogenase flavoprotein C-terminal domain
A4R38_RS08195	SM00091	PAS domain
A4R38_RS08195	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS08205	SM01092	CO dehydrogenase flavoprotein C-terminal domain
A4R38_RS08210	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
A4R38_RS08215	SM00257	Lysin motif
A4R38_RS08265	SM00354	helix_turn _helix lactose operon repressor
A4R38_RS08270	SM00563	Phosphate acyltransferases
A4R38_RS08295	SM00927	DNA mismatch repair enzyme MutH
A4R38_RS08315	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A4R38_RS08375	SM00646	A4R38_RS08375
A4R38_RS08380	SM01061	CAT RNA binding domain
A4R38_RS08410	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS08515	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS08515	SM01086	C-terminal, D2-small domain, of ClpB protein
A4R38_RS08565	SM00925	MltA specific insert domain
A4R38_RS08605	SM00420	helix_turn_helix, Deoxyribose operon repressor
A4R38_RS08605	SM01134	A4R38_RS08605
A4R38_RS08630	SM01007	Class II Aldolase and Adducin N-terminal domain
A4R38_RS08640	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
A4R38_RS08640	SM00475	5'-3' exonuclease
A4R38_RS08695	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
A4R38_RS08700	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
A4R38_RS08705	SM00073	Histidine Phosphotransfer domain
A4R38_RS08705	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A4R38_RS08705	SM00387	Histidine kinase-like ATPases
A4R38_RS08705	SM00388	His Kinase A (phosphoacceptor) domain
A4R38_RS08705	SM00448	cheY-homologous receiver domain
A4R38_RS08715	SM00954	Region found in RelA / SpoT proteins
A4R38_RS08730	SM01192	A4R38_RS08730
A4R38_RS08730	SM01193	A4R38_RS08730
A4R38_RS08750	SM00354	helix_turn _helix lactose operon repressor
A4R38_RS08755	SM00640	Glycosyl hydrolases family 32
A4R38_RS08800	SM00893	Electron transfer flavoprotein domain
A4R38_RS08905	SM00257	Lysin motif
A4R38_RS08920	SM00849	Metallo-beta-lactamase superfamily
A4R38_RS08935	SM01007	Class II Aldolase and Adducin N-terminal domain
A4R38_RS08950	SM00420	helix_turn_helix, Deoxyribose operon repressor
A4R38_RS08950	SM01134	A4R38_RS08950
A4R38_RS08960	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
A4R38_RS08960	SM00534	ATPase domain of DNA mismatch repair MUTS family
A4R38_RS08975	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A4R38_RS08975	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS09055	SM00530	Helix-turn-helix XRE-family like proteins 
A4R38_RS09085	SM00849	Metallo-beta-lactamase superfamily
A4R38_RS09090	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A4R38_RS09090	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS09100	SM00420	helix_turn_helix, Deoxyribose operon repressor
A4R38_RS09100	SM01134	A4R38_RS09100
A4R38_RS09145	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS09160	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A4R38_RS09235	SM00347	helix_turn_helix multiple antibiotic resistance protein
A4R38_RS09265	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS09305	SM00528	Domain in histone-like proteins of HNS family
A4R38_RS09310	SM00450	Rhodanese Homology Domain
A4R38_RS09315	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A4R38_RS09325	SM00257	Lysin motif
A4R38_RS09325	SM00749	bacterial OsmY and nodulation domain
A4R38_RS09330	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4R38_RS09330	SM00895	A4R38_RS09330
A4R38_RS09400	SM01091	Transporter associated domain
A4R38_RS09410	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS09410	SM00962	SRP54-type protein, GTPase domain
A4R38_RS09410	SM00963	SRP54-type protein, helical bundle domain
A4R38_RS09440	SM00267	diguanylate cyclase
A4R38_RS09460	SM00830	Chorismate mutase type II
A4R38_RS09465	SM00830	Chorismate mutase type II
A4R38_RS09485	SM00363	S4 RNA-binding domain
A4R38_RS09495	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS09495	SM01086	C-terminal, D2-small domain, of ClpB protein
A4R38_RS09530	SM00155	Phospholipase D. Active site motifs.
A4R38_RS09535	SM00881	CoA binding domain
A4R38_RS09540	SM01144	A4R38_RS09540
A4R38_RS09555	SM00967	RNA 2'-O ribose methyltransferase substrate binding
A4R38_RS09560	SM00986	Uracil DNA glycosylase superfamily
A4R38_RS09560	SM00987	UreE urease accessory protein, C-terminal domain 
A4R38_RS09580	SM00487	DEAD-like helicases superfamily
A4R38_RS09580	SM00490	helicase superfamily c-terminal domain
A4R38_RS09630	SM00358	Double-stranded RNA binding motif
A4R38_RS09630	SM00535	Ribonuclease III family
A4R38_RS09685	SM00062	Bacterial periplasmic substrate-binding proteins
A4R38_RS09690	SM01211	A4R38_RS09690
A4R38_RS09695	SM00387	Histidine kinase-like ATPases
A4R38_RS09695	SM00388	His Kinase A (phosphoacceptor) domain
A4R38_RS09705	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS09705	SM00448	cheY-homologous receiver domain
A4R38_RS09710	SM00938	Nitrogen regulatory protein P-II
A4R38_RS09730	SM00028	Tetratricopeptide repeats
A4R38_RS09740	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS09750	SM00829	Enoylreductase
A4R38_RS09810	SM00271	DnaJ molecular chaperone homology domain
A4R38_RS09840	SM00450	Rhodanese Homology Domain
A4R38_RS09845	SM01359	A4R38_RS09845
A4R38_RS09845	SM01360	A4R38_RS09845
A4R38_RS09855	SM00562	A4R38_RS09855
A4R38_RS09865	SM00530	Helix-turn-helix XRE-family like proteins 
A4R38_RS09885	SM00564	beta-propeller repeat
A4R38_RS09920	SM00116	Domain in cystathionine beta-synthase and other proteins.
A4R38_RS09920	SM01240	A4R38_RS09920
A4R38_RS09950	SM00052	Putative diguanylate phosphodiesterase
A4R38_RS09950	SM00267	diguanylate cyclase
A4R38_RS10015	SM01130	A4R38_RS10015
A4R38_RS10075	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A4R38_RS10075	SM00387	Histidine kinase-like ATPases
A4R38_RS10095	SM00861	Transketolase, pyrimidine binding domain
A4R38_RS10105	SM00919	Malic enzyme, NAD binding domain
A4R38_RS10105	SM01274	A4R38_RS10105
A4R38_RS10110	SM00877	A4R38_RS10110
A4R38_RS10135	SM00877	A4R38_RS10135
A4R38_RS10180	SM00877	A4R38_RS10180
A4R38_RS10185	SM00877	A4R38_RS10185
A4R38_RS10190	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS10200	SM00646	A4R38_RS10200
A4R38_RS10235	SM00822	A4R38_RS10235
A4R38_RS10255	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS10300	SM00771	ZipA, C-terminal domain (FtsZ-binding)
A4R38_RS10305	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A4R38_RS10305	SM00292	breast cancer carboxy-terminal domain
A4R38_RS10305	SM00532	Ligase N family
A4R38_RS10395	SM00052	Putative diguanylate phosphodiesterase
A4R38_RS10395	SM00267	diguanylate cyclase
A4R38_RS10455	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS10460	SM00448	cheY-homologous receiver domain
A4R38_RS10460	SM00850	LytTr DNA-binding domain
A4R38_RS10465	SM00387	Histidine kinase-like ATPases
A4R38_RS10520	SM00062	Bacterial periplasmic substrate-binding proteins
A4R38_RS10520	SM00073	Histidine Phosphotransfer domain
A4R38_RS10520	SM00387	Histidine kinase-like ATPases
A4R38_RS10520	SM00388	His Kinase A (phosphoacceptor) domain
A4R38_RS10520	SM00448	cheY-homologous receiver domain
A4R38_RS10525	SM00421	helix_turn_helix, Lux Regulon
A4R38_RS10525	SM00448	cheY-homologous receiver domain
A4R38_RS10640	SM00463	Small MutS-related domain
A4R38_RS10680	SM00825	Beta-ketoacyl synthase
A4R38_RS10700	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A4R38_RS10745	SM00062	Bacterial periplasmic substrate-binding proteins
A4R38_RS10750	SM00062	Bacterial periplasmic substrate-binding proteins
A4R38_RS10765	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS10775	SM00905	Dihydroneopterin aldolase
A4R38_RS10840	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A4R38_RS10875	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
A4R38_RS10880	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A4R38_RS10880	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
A4R38_RS10930	SM00327	von Willebrand factor (vWF) type A domain
A4R38_RS10935	SM00849	Metallo-beta-lactamase superfamily
A4R38_RS10970	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
A4R38_RS11035	SM00852	Probable molybdopterin binding domain
A4R38_RS11040	SM00346	helix_turn_helix isocitrate lyase regulation
A4R38_RS11045	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
A4R38_RS11120	SM00869	Autotransporter beta-domain
A4R38_RS11130	SM00434	DNA Topoisomerase IV
A4R38_RS11145	SM01359	A4R38_RS11145
A4R38_RS11145	SM01360	A4R38_RS11145
A4R38_RS11200	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS11410	SM00857	Resolvase, N terminal domain
A4R38_RS11435	SM00882	Coenzyme A transferase
A4R38_RS11440	SM00882	Coenzyme A transferase
A4R38_RS11445	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS11445	SM00448	cheY-homologous receiver domain
A4R38_RS11450	SM00091	PAS domain
A4R38_RS11450	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A4R38_RS11450	SM00387	Histidine kinase-like ATPases
A4R38_RS11450	SM00388	His Kinase A (phosphoacceptor) domain
A4R38_RS11455	SM00387	Histidine kinase-like ATPases
A4R38_RS11455	SM00388	His Kinase A (phosphoacceptor) domain
A4R38_RS11455	SM00448	cheY-homologous receiver domain
A4R38_RS11460	SM00421	helix_turn_helix, Lux Regulon
A4R38_RS11460	SM00448	cheY-homologous receiver domain
A4R38_RS11465	SM00387	Histidine kinase-like ATPases
A4R38_RS11490	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS11500	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS11530	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A4R38_RS11555	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS11595	SM00421	helix_turn_helix, Lux Regulon
A4R38_RS11595	SM00448	cheY-homologous receiver domain
A4R38_RS11640	SM00487	DEAD-like helicases superfamily
A4R38_RS11640	SM00490	helicase superfamily c-terminal domain
A4R38_RS11645	SM00363	S4 RNA-binding domain
A4R38_RS11660	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS11680	SM00052	Putative diguanylate phosphodiesterase
A4R38_RS11690	SM00014	Acid phosphatase homologues
A4R38_RS11695	SM00833	Cobalamin synthesis protein cobW C-terminal domain
A4R38_RS11705	SM00841	Elongation factor P, C-terminal
A4R38_RS11705	SM01185	A4R38_RS11705
A4R38_RS11750	SM00100	Cyclic nucleotide-monophosphate binding domain
A4R38_RS11765	SM00518	AP endonuclease family 2
A4R38_RS11820	SM00354	helix_turn _helix lactose operon repressor
A4R38_RS11830	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS11915	SM01217	A4R38_RS11915
A4R38_RS11930	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS11945	SM00422	helix_turn_helix, mercury resistance
A4R38_RS11950	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A4R38_RS11955	SM00448	cheY-homologous receiver domain
A4R38_RS11955	SM00850	LytTr DNA-binding domain
A4R38_RS11985	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS12005	SM00773	Proposed nucleic acid binding domain
A4R38_RS12010	SM00773	Proposed nucleic acid binding domain
A4R38_RS12080	SM00641	Glycosyl hydrolases family 25
A4R38_RS12085	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4R38_RS12085	SM00866	A4R38_RS12085
A4R38_RS12105	SM01133	A4R38_RS12105
A4R38_RS12135	SM00829	Enoylreductase
A4R38_RS12140	SM00420	helix_turn_helix, Deoxyribose operon repressor
A4R38_RS12140	SM01134	A4R38_RS12140
A4R38_RS12145	SM00046	Diacylglycerol kinase catalytic domain (presumed)
A4R38_RS12165	SM00448	cheY-homologous receiver domain
A4R38_RS12165	SM00862	Transcriptional regulatory protein, C terminal
A4R38_RS12170	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A4R38_RS12170	SM00387	Histidine kinase-like ATPases
A4R38_RS12170	SM00388	His Kinase A (phosphoacceptor) domain
A4R38_RS12195	SM00327	von Willebrand factor (vWF) type A domain
A4R38_RS12215	SM00478	endonuclease III
A4R38_RS12215	SM01009	AlkA N-terminal domain
A4R38_RS12220	SM00052	Putative diguanylate phosphodiesterase
A4R38_RS12220	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A4R38_RS12220	SM00091	PAS domain
A4R38_RS12220	SM00267	diguanylate cyclase
A4R38_RS12240	SM01091	Transporter associated domain
A4R38_RS12250	SM00226	Low molecular weight phosphatase family
A4R38_RS12395	SM01350	A4R38_RS12395
A4R38_RS12400	SM00984	UDP binding domain
A4R38_RS12475	SM00479	A4R38_RS12475
A4R38_RS12480	SM00936	Penicillin-binding protein 5, C-terminal domain 
A4R38_RS12485	SM00871	Bacterial transcription activator, effector binding domain
A4R38_RS12515	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS12605	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS12745	SM00420	helix_turn_helix, Deoxyribose operon repressor
A4R38_RS12780	SM00470	ParB-like nuclease domain
A4R38_RS12875	SM00634	Bacterial Ig-like domain (group 1)
A4R38_RS12910	SM00822	A4R38_RS12910
A4R38_RS12910	SM00823	Phosphopantetheine attachment site
A4R38_RS12910	SM00824	Thioesterase
A4R38_RS12910	SM00825	Beta-ketoacyl synthase
A4R38_RS12910	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
A4R38_RS12915	SM00823	Phosphopantetheine attachment site
A4R38_RS12920	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS12925	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS12930	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS12990	SM00095	Transthyretin
A4R38_RS12995	SM00448	cheY-homologous receiver domain
A4R38_RS12995	SM00862	Transcriptional regulatory protein, C terminal
A4R38_RS13000	SM00387	Histidine kinase-like ATPases
A4R38_RS13000	SM00388	His Kinase A (phosphoacceptor) domain
A4R38_RS13025	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A4R38_RS13055	SM00267	diguanylate cyclase
A4R38_RS13075	SM00421	helix_turn_helix, Lux Regulon
A4R38_RS13125	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS13165	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS13200	SM00642	Alpha-amylase domain
A4R38_RS13235	SM00062	Bacterial periplasmic substrate-binding proteins
A4R38_RS13235	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
A4R38_RS13250	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS13255	SM00421	helix_turn_helix, Lux Regulon
A4R38_RS13270	SM00421	helix_turn_helix, Lux Regulon
A4R38_RS13270	SM00448	cheY-homologous receiver domain
A4R38_RS13275	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A4R38_RS13275	SM00465	GIY-YIG type nucleases (URI domain)
A4R38_RS13345	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS13390	SM00073	Histidine Phosphotransfer domain
A4R38_RS13390	SM00260	Two component signalling adaptor domain
A4R38_RS13390	SM00387	Histidine kinase-like ATPases
A4R38_RS13390	SM01231	A4R38_RS13390
A4R38_RS13395	SM00260	Two component signalling adaptor domain
A4R38_RS13400	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A4R38_RS13400	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A4R38_RS13400	SM00319	Homologues of the ligand binding domain of Tar
A4R38_RS13405	SM00138	Methyltransferase, chemotaxis proteins 
A4R38_RS13410	SM00448	cheY-homologous receiver domain
A4R38_RS13415	SM00448	cheY-homologous receiver domain
A4R38_RS13440	SM00836	DALR anticodon binding domain
A4R38_RS13440	SM01016	Arginyl tRNA synthetase N terminal dom
A4R38_RS13515	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A4R38_RS13520	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS13540	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS13550	SM00257	Lysin motif
A4R38_RS13620	SM00479	A4R38_RS13620
A4R38_RS13685	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A4R38_RS13690	SM00945	ProQ/FINO family
A4R38_RS13695	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A4R38_RS13695	SM00245	tail specific protease
A4R38_RS13710	SM00346	helix_turn_helix isocitrate lyase regulation
A4R38_RS13740	SM00357	Cold shock protein domain
A4R38_RS13785	SM01091	Transporter associated domain
A4R38_RS13790	SM00052	Putative diguanylate phosphodiesterase
A4R38_RS13830	SM00487	DEAD-like helicases superfamily
A4R38_RS13830	SM00491	A4R38_RS13830
A4R38_RS13850	SM00341	Helicase and RNase D C-terminal
A4R38_RS13850	SM00474	3'-5' exonuclease
A4R38_RS13890	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A4R38_RS13890	SM00267	diguanylate cyclase
A4R38_RS13910	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS13930	SM00267	diguanylate cyclase
A4R38_RS13935	SM00267	diguanylate cyclase
A4R38_RS13945	SM00763	PrkA AAA domain
A4R38_RS13965	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
A4R38_RS13990	SM00829	Enoylreductase
A4R38_RS14010	SM00420	helix_turn_helix, Deoxyribose operon repressor
A4R38_RS14010	SM01134	A4R38_RS14010
A4R38_RS14025	SM00870	A4R38_RS14025
A4R38_RS14060	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
A4R38_RS14060	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
A4R38_RS14060	SM00493	A4R38_RS14060
A4R38_RS14065	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
A4R38_RS14085	SM00450	Rhodanese Homology Domain
A4R38_RS14090	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS14165	SM00465	GIY-YIG type nucleases (URI domain)
A4R38_RS14200	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS14215	SM01060	A4R38_RS14215
A4R38_RS14275	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A4R38_RS14305	SM00873	B3/4 domain
A4R38_RS14305	SM00874	tRNA synthetase B5 domain
A4R38_RS14305	SM00896	Ferredoxin-fold anticodon binding domain
A4R38_RS14310	SM00411	bacterial (prokaryotic) histone like domain
A4R38_RS14325	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS14385	SM00893	Electron transfer flavoprotein domain
A4R38_RS14390	SM00893	Electron transfer flavoprotein domain
A4R38_RS14400	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS14410	SM00882	Coenzyme A transferase
A4R38_RS14475	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS14495	SM00257	Lysin motif
A4R38_RS14520	SM00790	Aldehyde ferredoxin oxidoreductase, N-terminal domain
A4R38_RS14595	SM00354	helix_turn _helix lactose operon repressor
A4R38_RS14630	SM00479	A4R38_RS14630
A4R38_RS14685	SM00347	helix_turn_helix multiple antibiotic resistance protein
A4R38_RS14710	SM00363	S4 RNA-binding domain
A4R38_RS14735	SM00478	endonuclease III
A4R38_RS14735	SM00525	A4R38_RS14735
A4R38_RS14745	SM00900	A4R38_RS14745
A4R38_RS14805	SM00354	helix_turn _helix lactose operon repressor
A4R38_RS14860	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A4R38_RS14860	SM00387	Histidine kinase-like ATPases
A4R38_RS14860	SM00388	His Kinase A (phosphoacceptor) domain
A4R38_RS14865	SM00448	cheY-homologous receiver domain
A4R38_RS14865	SM00862	Transcriptional regulatory protein, C terminal
A4R38_RS14890	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
A4R38_RS14890	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
A4R38_RS14975	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A4R38_RS15005	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
A4R38_RS15050	SM00530	Helix-turn-helix XRE-family like proteins 
A4R38_RS15125	SM00507	HNH nucleases
A4R38_RS15135	SM00357	Cold shock protein domain
A4R38_RS15140	SM00357	Cold shock protein domain
A4R38_RS15165	SM00357	Cold shock protein domain
A4R38_RS15245	SM00635	Bacterial Ig-like domain 2
A4R38_RS15275	SM00232	JAB/MPN domain
A4R38_RS15285	SM00060	Fibronectin type 3 domain
A4R38_RS15315	SM00857	Resolvase, N terminal domain
A4R38_RS15340	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4R38_RS15340	SM00895	A4R38_RS15340
A4R38_RS15360	SM00267	diguanylate cyclase
A4R38_RS15385	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS15390	SM00347	helix_turn_helix multiple antibiotic resistance protein
A4R38_RS15425	SM00267	diguanylate cyclase
A4R38_RS15450	SM00530	Helix-turn-helix XRE-family like proteins 
A4R38_RS15490	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS15535	SM00052	Putative diguanylate phosphodiesterase
A4R38_RS15535	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A4R38_RS15535	SM00091	PAS domain
A4R38_RS15535	SM00267	diguanylate cyclase
A4R38_RS15555	SM00919	Malic enzyme, NAD binding domain
A4R38_RS15555	SM01274	A4R38_RS15555
A4R38_RS15560	SM00829	Enoylreductase
A4R38_RS15570	SM00530	Helix-turn-helix XRE-family like proteins 
A4R38_RS15590	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A4R38_RS15605	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A4R38_RS15635	SM00903	Flavin reductase like domain
A4R38_RS15705	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS15715	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4R38_RS15720	SM00530	Helix-turn-helix XRE-family like proteins 
A4R38_RS15735	SM00530	Helix-turn-helix XRE-family like proteins 
A4R38_RS15785	SM01150	A4R38_RS15785
A4R38_RS15820	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
A4R38_RS15835	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS15835	SM00487	DEAD-like helicases superfamily
A4R38_RS15835	SM00490	helicase superfamily c-terminal domain
A4R38_RS15835	SM00847	Helicase associated domain (HA2)  Add an annotation
A4R38_RS15850	SM00710	Parallel beta-helix repeats
A4R38_RS15890	SM00890	Domain of unknown function
A4R38_RS15925	SM00487	DEAD-like helicases superfamily
A4R38_RS15925	SM00490	helicase superfamily c-terminal domain
A4R38_RS15940	SM00091	PAS domain
A4R38_RS15940	SM00267	diguanylate cyclase
A4R38_RS15945	SM00463	Small MutS-related domain
A4R38_RS15960	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS15980	SM00100	Cyclic nucleotide-monophosphate binding domain
A4R38_RS15980	SM00419	helix_turn_helix, cAMP Regulatory protein
A4R38_RS16035	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
A4R38_RS16045	SM00091	PAS domain
A4R38_RS16045	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS16060	SM00354	helix_turn _helix lactose operon repressor
A4R38_RS16070	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS16115	SM00642	Alpha-amylase domain
A4R38_RS16120	SM00450	Rhodanese Homology Domain
A4R38_RS16145	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS16175	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS16180	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS16220	SM00357	Cold shock protein domain
A4R38_RS16220	SM00955	A4R38_RS16220
A4R38_RS16230	SM00052	Putative diguanylate phosphodiesterase
A4R38_RS16230	SM00091	PAS domain
A4R38_RS16230	SM00267	diguanylate cyclase
A4R38_RS16240	SM00420	helix_turn_helix, Deoxyribose operon repressor
A4R38_RS16240	SM01134	A4R38_RS16240
A4R38_RS16255	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
A4R38_RS16260	SM00028	Tetratricopeptide repeats
A4R38_RS16270	SM00014	Acid phosphatase homologues
A4R38_RS16305	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
A4R38_RS16305	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
A4R38_RS16305	SM00493	A4R38_RS16305
A4R38_RS16330	SM00822	A4R38_RS16330
A4R38_RS16350	SM00363	S4 RNA-binding domain
A4R38_RS16365	SM00481	DNA polymerase alpha chain like domain
A4R38_RS16435	SM00155	Phospholipase D. Active site motifs.
A4R38_RS16445	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS16450	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS16495	SM00528	Domain in histone-like proteins of HNS family
A4R38_RS16505	SM00448	cheY-homologous receiver domain
A4R38_RS16555	SM00849	Metallo-beta-lactamase superfamily
A4R38_RS16585	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A4R38_RS16600	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A4R38_RS16600	SM00387	Histidine kinase-like ATPases
A4R38_RS16605	SM00421	helix_turn_helix, Lux Regulon
A4R38_RS16605	SM00448	cheY-homologous receiver domain
A4R38_RS16660	SM00937	A4R38_RS16660
A4R38_RS16680	SM01400	A4R38_RS16680
A4R38_RS16845	SM00091	PAS domain
A4R38_RS16845	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS16855	SM01120	A4R38_RS16855
A4R38_RS16880	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS16920	SM01091	Transporter associated domain
A4R38_RS16925	SM01005	Alanine racemase, C-terminal domain
A4R38_RS16940	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4R38_RS17060	SM00052	Putative diguanylate phosphodiesterase
A4R38_RS17085	SM00052	Putative diguanylate phosphodiesterase
A4R38_RS17085	SM01034	Sensors of blue-light using FAD
A4R38_RS17090	SM00422	helix_turn_helix, mercury resistance
A4R38_RS17110	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS17195	SM00635	Bacterial Ig-like domain 2
A4R38_RS17370	SM00530	Helix-turn-helix XRE-family like proteins 
A4R38_RS17380	SM01022	A4R38_RS17380
A4R38_RS17445	SM01329	A4R38_RS17445
A4R38_RS17475	SM00448	cheY-homologous receiver domain
A4R38_RS17475	SM00862	Transcriptional regulatory protein, C terminal
A4R38_RS17480	SM00387	Histidine kinase-like ATPases
A4R38_RS17485	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
A4R38_RS17500	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS17580	SM00635	Bacterial Ig-like domain 2
A4R38_RS17725	SM00507	HNH nucleases
A4R38_RS17905	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS17920	SM00487	DEAD-like helicases superfamily
A4R38_RS17920	SM00490	helicase superfamily c-terminal domain
A4R38_RS17920	SM00982	A4R38_RS17920
A4R38_RS17920	SM01058	CarD-like/TRCF domain
A4R38_RS17925	SM00257	Lysin motif
A4R38_RS18015	SM00825	Beta-ketoacyl synthase
A4R38_RS18025	SM00822	A4R38_RS18025
A4R38_RS18030	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
A4R38_RS18060	SM00363	S4 RNA-binding domain
A4R38_RS18070	SM00316	Ribosomal protein S1-like RNA-binding domain
A4R38_RS18085	SM00047	Lysozyme subfamily 2
A4R38_RS18130	SM00858	A4R38_RS18130
A4R38_RS18210	SM00867	YceI-like domain 
A4R38_RS18215	SM00450	Rhodanese Homology Domain
A4R38_RS18270	SM00155	Phospholipase D. Active site motifs.
A4R38_RS18275	SM00506	Appr-1"-p processing enzyme
A4R38_RS18305	SM00421	helix_turn_helix, Lux Regulon
A4R38_RS18335	SM00481	DNA polymerase alpha chain like domain
A4R38_RS18355	SM00267	diguanylate cyclase
A4R38_RS18360	SM00028	Tetratricopeptide repeats
A4R38_RS18445	SM00903	Flavin reductase like domain
A4R38_RS18480	SM00271	DnaJ molecular chaperone homology domain
A4R38_RS18505	SM00448	cheY-homologous receiver domain
A4R38_RS18505	SM00862	Transcriptional regulatory protein, C terminal
A4R38_RS18515	SM00073	Histidine Phosphotransfer domain
A4R38_RS18515	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A4R38_RS18515	SM00387	Histidine kinase-like ATPases
A4R38_RS18515	SM00388	His Kinase A (phosphoacceptor) domain
A4R38_RS18515	SM00448	cheY-homologous receiver domain
A4R38_RS18535	SM00357	Cold shock protein domain
A4R38_RS18540	SM00357	Cold shock protein domain
A4R38_RS18615	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
A4R38_RS18620	SM00992	Hemimethylated DNA-binding protein YccV like
A4R38_RS18625	SM00881	CoA binding domain
A4R38_RS18640	SM00851	MGS-like domain
A4R38_RS18715	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS18720	SM00981	A4R38_RS18720
A4R38_RS18745	SM00062	Bacterial periplasmic substrate-binding proteins
A4R38_RS18760	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS18795	SM00849	Metallo-beta-lactamase superfamily
A4R38_RS18860	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS18865	SM00849	Metallo-beta-lactamase superfamily
A4R38_RS18870	SM00411	bacterial (prokaryotic) histone like domain
A4R38_RS18875	SM00316	Ribosomal protein S1-like RNA-binding domain
A4R38_RS18945	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A4R38_RS18955	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS18965	SM00843	A4R38_RS18965
A4R38_RS18970	SM00344	helix_turn_helix ASNC type
A4R38_RS18980	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS18985	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS18995	SM00316	Ribosomal protein S1-like RNA-binding domain
A4R38_RS19005	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS19005	SM01086	C-terminal, D2-small domain, of ClpB protein
A4R38_RS19015	SM00357	Cold shock protein domain
A4R38_RS19020	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS19085	SM00644	A4R38_RS19085
A4R38_RS19100	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS19105	SM00062	Bacterial periplasmic substrate-binding proteins
A4R38_RS19105	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
A4R38_RS19120	SM00062	Bacterial periplasmic substrate-binding proteins
A4R38_RS19120	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
A4R38_RS19145	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS19220	SM00014	Acid phosphatase homologues
A4R38_RS19225	SM00420	helix_turn_helix, Deoxyribose operon repressor
A4R38_RS19225	SM01134	A4R38_RS19225
A4R38_RS19230	SM00936	Penicillin-binding protein 5, C-terminal domain 
A4R38_RS19250	SM00729	Elongator protein 3, MiaB family, Radical SAM
A4R38_RS19255	SM00267	diguanylate cyclase
A4R38_RS19280	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS19290	SM00852	Probable molybdopterin binding domain
A4R38_RS19320	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS19335	SM00529	Helix-turn-helix diphteria tox regulatory element
A4R38_RS19370	SM00062	Bacterial periplasmic substrate-binding proteins
A4R38_RS19370	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
A4R38_RS19380	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS19405	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
A4R38_RS19445	SM00487	DEAD-like helicases superfamily
A4R38_RS19445	SM00490	helicase superfamily c-terminal domain
A4R38_RS19460	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS19485	SM00155	Phospholipase D. Active site motifs.
A4R38_RS19520	SM00852	Probable molybdopterin binding domain
A4R38_RS19525	SM00729	Elongator protein 3, MiaB family, Radical SAM
A4R38_RS19535	SM00487	DEAD-like helicases superfamily
A4R38_RS19535	SM00490	helicase superfamily c-terminal domain
A4R38_RS19555	SM00729	Elongator protein 3, MiaB family, Radical SAM
A4R38_RS19555	SM00876	Biotin and Thiamin Synthesis associated domain
A4R38_RS19605	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS19635	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS19660	SM00855	Phosphoglycerate mutase family
A4R38_RS19790	SM00028	Tetratricopeptide repeats
A4R38_RS19795	SM00872	Alpha mannosidase, middle domain
A4R38_RS19805	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4R38_RS19805	SM00866	A4R38_RS19805
A4R38_RS19810	SM00881	CoA binding domain
A4R38_RS19825	SM00861	Transketolase, pyrimidine binding domain
A4R38_RS19885	SM00858	A4R38_RS19885
A4R38_RS19890	SM00822	A4R38_RS19890
A4R38_RS19895	SM00829	Enoylreductase
A4R38_RS19905	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4R38_RS19905	SM00895	A4R38_RS19905
A4R38_RS19915	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
A4R38_RS19915	SM01232	A4R38_RS19915
A4R38_RS19925	SM00797	Allophanate hydrolase subunit 2
A4R38_RS19930	SM00796	Allophanate hydrolase subunit 1
A4R38_RS19980	SM00387	Histidine kinase-like ATPases
A4R38_RS19980	SM00388	His Kinase A (phosphoacceptor) domain
A4R38_RS19985	SM00448	cheY-homologous receiver domain
A4R38_RS19985	SM00862	Transcriptional regulatory protein, C terminal
A4R38_RS20060	SM00420	helix_turn_helix, Deoxyribose operon repressor
A4R38_RS20060	SM01134	A4R38_RS20060
A4R38_RS20080	SM01130	A4R38_RS20080
A4R38_RS20180	SM00729	Elongator protein 3, MiaB family, Radical SAM
A4R38_RS20195	SM00116	Domain in cystathionine beta-synthase and other proteins.
A4R38_RS20195	SM01091	Transporter associated domain
A4R38_RS20210	SM00062	Bacterial periplasmic substrate-binding proteins
A4R38_RS20225	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS20250	SM00671	Sel1-like repeats.
A4R38_RS20285	SM00855	Phosphoglycerate mutase family
A4R38_RS20315	SM00936	Penicillin-binding protein 5, C-terminal domain 
A4R38_RS20340	SM00729	Elongator protein 3, MiaB family, Radical SAM
A4R38_RS20360	SM00357	Cold shock protein domain
A4R38_RS20375	SM00448	cheY-homologous receiver domain
A4R38_RS20380	SM00091	PAS domain
A4R38_RS20380	SM00387	Histidine kinase-like ATPases
A4R38_RS20385	SM00764	Citrate lyase ligase C-terminal domain
A4R38_RS20460	SM00470	ParB-like nuclease domain
A4R38_RS20490	SM00822	A4R38_RS20490
A4R38_RS20530	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS20540	SM00823	Phosphopantetheine attachment site
A4R38_RS20540	SM00824	Thioesterase
A4R38_RS20545	SM00923	MbtH-like protein
A4R38_RS20570	SM00861	Transketolase, pyrimidine binding domain
A4R38_RS20600	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS20695	SM00448	cheY-homologous receiver domain
A4R38_RS20695	SM00862	Transcriptional regulatory protein, C terminal
A4R38_RS20700	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A4R38_RS20700	SM00387	Histidine kinase-like ATPases
A4R38_RS20700	SM00388	His Kinase A (phosphoacceptor) domain
A4R38_RS20710	SM00028	Tetratricopeptide repeats
A4R38_RS20765	SM00840	A4R38_RS20765
A4R38_RS20785	SM01001	AIR carboxylase
A4R38_RS20865	SM00346	helix_turn_helix isocitrate lyase regulation
A4R38_RS20880	SM00450	Rhodanese Homology Domain
A4R38_RS20915	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS20925	SM00822	A4R38_RS20925
A4R38_RS20940	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS20945	SM00244	prohibitin homologues
A4R38_RS20965	SM00422	helix_turn_helix, mercury resistance
A4R38_RS20985	SM00530	Helix-turn-helix XRE-family like proteins 
A4R38_RS21050	SM00387	Histidine kinase-like ATPases
A4R38_RS21055	SM00493	A4R38_RS21055
A4R38_RS21065	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS21120	SM01266	A4R38_RS21120
A4R38_RS21130	SM00052	Putative diguanylate phosphodiesterase
A4R38_RS21165	SM00938	Nitrogen regulatory protein P-II
A4R38_RS21170	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS21175	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS21180	SM00344	helix_turn_helix ASNC type
A4R38_RS21205	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A4R38_RS21215	SM00411	bacterial (prokaryotic) histone like domain
A4R38_RS21220	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS21220	SM00464	Found in ATP-dependent protease La (LON)
A4R38_RS21225	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS21225	SM00994	ClpX C4-type zinc finger
A4R38_RS21225	SM01086	C-terminal, D2-small domain, of ClpB protein
A4R38_RS21305	SM00981	A4R38_RS21305
A4R38_RS21320	SM00861	Transketolase, pyrimidine binding domain
A4R38_RS21370	SM00507	HNH nucleases
A4R38_RS21385	SM01323	A4R38_RS21385
A4R38_RS21405	SM00642	Alpha-amylase domain
A4R38_RS21420	SM00091	PAS domain
A4R38_RS21420	SM00387	Histidine kinase-like ATPases
A4R38_RS21420	SM00388	His Kinase A (phosphoacceptor) domain
A4R38_RS21425	SM00448	cheY-homologous receiver domain
A4R38_RS21425	SM00862	Transcriptional regulatory protein, C terminal
A4R38_RS21500	SM00267	diguanylate cyclase
A4R38_RS21510	SM00098	Alkaline phosphatase homologues
A4R38_RS21560	SM00869	Autotransporter beta-domain
A4R38_RS21565	SM01004	Delta-aminolevulinic acid dehydratase
A4R38_RS21580	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS21585	SM00062	Bacterial periplasmic substrate-binding proteins
A4R38_RS21595	SM00829	Enoylreductase
A4R38_RS21620	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A4R38_RS21645	SM00346	helix_turn_helix isocitrate lyase regulation
A4R38_RS21655	SM01038	Beta galactosidase small chain
A4R38_RS21665	SM01266	A4R38_RS21665
A4R38_RS21715	SM00829	Enoylreductase
A4R38_RS21745	SM00248	ankyrin repeats
A4R38_RS21760	SM00052	Putative diguanylate phosphodiesterase
A4R38_RS21760	SM00421	helix_turn_helix, Lux Regulon
A4R38_RS21800	SM00421	helix_turn_helix, Lux Regulon
A4R38_RS21810	SM00869	Autotransporter beta-domain
A4R38_RS21840	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS21865	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS21865	SM00871	Bacterial transcription activator, effector binding domain
A4R38_RS21870	SM00634	Bacterial Ig-like domain (group 1)
A4R38_RS21920	SM00421	helix_turn_helix, Lux Regulon
A4R38_RS21985	SM00487	DEAD-like helicases superfamily
A4R38_RS22015	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
A4R38_RS22075	SM01321	A4R38_RS22075
A4R38_RS22120	SM00479	A4R38_RS22120
A4R38_RS22135	SM00849	Metallo-beta-lactamase superfamily
A4R38_RS22140	SM00257	Lysin motif
A4R38_RS22200	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS22200	SM00930	A4R38_RS22200
A4R38_RS22245	SM01322	A4R38_RS22245
A4R38_RS22260	SM00977	TilS substrate C-terminal domain
A4R38_RS22280	SM00481	DNA polymerase alpha chain like domain
A4R38_RS22310	SM00935	Outer membrane protein (OmpH-like)
A4R38_RS22320	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A4R38_RS22365	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A4R38_RS22385	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A4R38_RS22390	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A4R38_RS22435	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS22470	SM00487	DEAD-like helicases superfamily
A4R38_RS22470	SM00490	helicase superfamily c-terminal domain
A4R38_RS22470	SM00847	Helicase associated domain (HA2)  Add an annotation
A4R38_RS22580	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS22585	SM00947	Carbonic anhydrase
A4R38_RS22595	SM00564	beta-propeller repeat
A4R38_RS22650	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4R38_RS22650	SM00895	A4R38_RS22650
A4R38_RS22705	SM00644	A4R38_RS22705
A4R38_RS22735	SM01240	A4R38_RS22735
A4R38_RS22760	SM00957	SecA DEAD-like domain
A4R38_RS22760	SM00958	SecA preprotein cross-linking domain
A4R38_RS22775	SM00864	Tubulin/FtsZ family, GTPase domain
A4R38_RS22775	SM00865	Tubulin/FtsZ family, C-terminal domain
A4R38_RS22780	SM00842	Cell division protein FtsA
A4R38_RS22850	SM00354	helix_turn _helix lactose operon repressor
A4R38_RS22880	SM00917	LeuA allosteric (dimerisation) domain
A4R38_RS22885	SM01329	A4R38_RS22885
A4R38_RS22920	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS22945	SM01130	A4R38_RS22945
A4R38_RS22950	SM00420	helix_turn_helix, Deoxyribose operon repressor
A4R38_RS22955	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS22970	SM01007	Class II Aldolase and Adducin N-terminal domain
A4R38_RS22975	SM00486	DNA polymerase type-B family
A4R38_RS22980	SM00487	DEAD-like helicases superfamily
A4R38_RS22980	SM00490	helicase superfamily c-terminal domain
A4R38_RS22990	SM00271	DnaJ molecular chaperone homology domain
A4R38_RS23010	SM00650	Ribosomal RNA adenine dimethylases
A4R38_RS23065	SM00893	Electron transfer flavoprotein domain
A4R38_RS23070	SM00893	Electron transfer flavoprotein domain
A4R38_RS23115	SM00851	MGS-like domain
A4R38_RS23115	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
A4R38_RS23120	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
A4R38_RS23170	SM00904	Riboflavin kinase
A4R38_RS23235	SM00271	DnaJ molecular chaperone homology domain
A4R38_RS23260	SM00852	Probable molybdopterin binding domain
A4R38_RS23320	SM00448	cheY-homologous receiver domain
A4R38_RS23320	SM00862	Transcriptional regulatory protein, C terminal
A4R38_RS23330	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A4R38_RS23330	SM00387	Histidine kinase-like ATPases
A4R38_RS23330	SM00388	His Kinase A (phosphoacceptor) domain
A4R38_RS23335	SM00448	cheY-homologous receiver domain
A4R38_RS23335	SM00862	Transcriptional regulatory protein, C terminal
A4R38_RS23345	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS23345	SM00871	Bacterial transcription activator, effector binding domain
A4R38_RS23350	SM00855	Phosphoglycerate mutase family
A4R38_RS23370	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS23375	SM00530	Helix-turn-helix XRE-family like proteins 
A4R38_RS23385	SM00530	Helix-turn-helix XRE-family like proteins 
A4R38_RS23390	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS23410	SM00530	Helix-turn-helix XRE-family like proteins 
A4R38_RS23425	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
A4R38_RS23430	SM01133	A4R38_RS23430
A4R38_RS23465	SM00749	bacterial OsmY and nodulation domain
A4R38_RS23525	SM00421	helix_turn_helix, Lux Regulon
A4R38_RS23530	SM00421	helix_turn_helix, Lux Regulon
A4R38_RS23550	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS23565	SM00829	Enoylreductase
A4R38_RS23570	SM00895	A4R38_RS23570
A4R38_RS23580	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A4R38_RS23580	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A4R38_RS23580	SM00319	Homologues of the ligand binding domain of Tar
A4R38_RS23600	SM00833	Cobalamin synthesis protein cobW C-terminal domain
A4R38_RS23705	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4R38_RS23705	SM00895	A4R38_RS23705
A4R38_RS23810	SM00155	Phospholipase D. Active site motifs.
A4R38_RS23890	SM00420	helix_turn_helix, Deoxyribose operon repressor
A4R38_RS23890	SM01134	A4R38_RS23890
A4R38_RS23895	SM00346	helix_turn_helix isocitrate lyase regulation
A4R38_RS23900	SM01130	A4R38_RS23900
A4R38_RS23930	SM01007	Class II Aldolase and Adducin N-terminal domain
A4R38_RS23950	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS24035	SM00869	Autotransporter beta-domain
A4R38_RS24045	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS24145	SM00420	helix_turn_helix, Deoxyribose operon repressor
A4R38_RS24145	SM01134	A4R38_RS24145
A4R38_RS24185	SM00354	helix_turn _helix lactose operon repressor
A4R38_RS24260	SM00530	Helix-turn-helix XRE-family like proteins 
A4R38_RS24285	SM00387	Histidine kinase-like ATPases
A4R38_RS24315	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A4R38_RS24330	SM00829	Enoylreductase
A4R38_RS24355	SM00354	helix_turn _helix lactose operon repressor
A4R38_RS24460	SM00831	Cation transporter/ATPase, N-terminus
A4R38_RS24465	SM00354	helix_turn _helix lactose operon repressor
A4R38_RS24475	SM00642	Alpha-amylase domain
A4R38_RS24530	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS24570	SM01091	Transporter associated domain
A4R38_RS24650	SM00882	Coenzyme A transferase
A4R38_RS24670	SM00530	Helix-turn-helix XRE-family like proteins 
