A4R38_RS00005	SM01007	Class II Aldolase and Adducin N-terminal domain
A4R38_RS00015	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
A4R38_RS00040	SM00420	helix_turn_helix, Deoxyribose operon repressor
A4R38_RS00040	SM01134	A4R38_RS00040
A4R38_RS00100	SM00967	RNA 2'-O ribose methyltransferase substrate binding
A4R38_RS00105	SM00316	Ribosomal protein S1-like RNA-binding domain
A4R38_RS00105	SM00357	Cold shock protein domain
A4R38_RS00105	SM00955	A4R38_RS00105
A4R38_RS00115	SM00788	Adenylosuccinate synthetase
A4R38_RS00125	SM00244	prohibitin homologues
A4R38_RS00130	SM00244	prohibitin homologues
A4R38_RS00150	SM00853	MutL C terminal dimerisation domain
A4R38_RS00150	SM01340	A4R38_RS00150
A4R38_RS00155	SM00646	A4R38_RS00155
A4R38_RS00190	SM00479	A4R38_RS00190
A4R38_RS00270	SM00841	Elongation factor P, C-terminal
A4R38_RS00270	SM01185	A4R38_RS00270
A4R38_RS00295	SM00883	Chaperonin 10 Kd subunit
A4R38_RS00340	SM00862	Transcriptional regulatory protein, C terminal
A4R38_RS00380	SM00869	Autotransporter beta-domain
A4R38_RS00385	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS00390	SM00869	Autotransporter beta-domain
A4R38_RS00420	SM00091	PAS domain
A4R38_RS00420	SM00387	Histidine kinase-like ATPases
A4R38_RS00425	SM00448	cheY-homologous receiver domain
A4R38_RS00460	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS00470	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS00485	SM00448	cheY-homologous receiver domain
A4R38_RS00485	SM00862	Transcriptional regulatory protein, C terminal
A4R38_RS00490	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A4R38_RS00490	SM00387	Histidine kinase-like ATPases
A4R38_RS00490	SM00388	His Kinase A (phosphoacceptor) domain
A4R38_RS00525	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS00540	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4R38_RS00540	SM00866	A4R38_RS00540
A4R38_RS00565	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS00570	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS00580	SM00072	Guanylate kinase homologues.
A4R38_RS00615	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS00635	SM00849	Metallo-beta-lactamase superfamily
A4R38_RS00660	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A4R38_RS00685	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS00690	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS00695	SM00671	Sel1-like repeats.
A4R38_RS00705	SM00028	Tetratricopeptide repeats
A4R38_RS00780	SM00422	helix_turn_helix, mercury resistance
A4R38_RS00785	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS00790	SM00052	Putative diguanylate phosphodiesterase
A4R38_RS00825	SM00387	Histidine kinase-like ATPases
A4R38_RS00830	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS00830	SM00448	cheY-homologous receiver domain
A4R38_RS00845	SM00881	CoA binding domain
A4R38_RS00865	SM00861	Transketolase, pyrimidine binding domain
A4R38_RS00885	SM01005	Alanine racemase, C-terminal domain
A4R38_RS00890	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS00895	SM00354	helix_turn _helix lactose operon repressor
A4R38_RS00900	SM00882	Coenzyme A transferase
A4R38_RS00920	SM00829	Enoylreductase
A4R38_RS00960	SM00563	Phosphate acyltransferases
A4R38_RS00985	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS01060	SM00363	S4 RNA-binding domain
A4R38_RS01070	SM00822	A4R38_RS01070
A4R38_RS01120	SM01018	B12 binding domain
A4R38_RS01125	SM00346	helix_turn_helix isocitrate lyase regulation
A4R38_RS01190	SM00798	AICARFT/IMPCHase bienzyme
A4R38_RS01190	SM00851	MGS-like domain
A4R38_RS01195	SM01209	A4R38_RS01195
A4R38_RS01195	SM01210	A4R38_RS01195
A4R38_RS01200	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS01200	SM00448	cheY-homologous receiver domain
A4R38_RS01205	SM00387	Histidine kinase-like ATPases
A4R38_RS01205	SM00388	His Kinase A (phosphoacceptor) domain
A4R38_RS01220	SM00411	bacterial (prokaryotic) histone like domain
A4R38_RS01275	SM00876	Biotin and Thiamin Synthesis associated domain
A4R38_RS01280	SM00663	RNA polymerase I subunit A N-terminus
A4R38_RS01305	SM00649	Ribosomal protein L11/L12
A4R38_RS01310	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
A4R38_RS01310	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
A4R38_RS01445	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A4R38_RS01465	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS01570	SM00487	DEAD-like helicases superfamily
A4R38_RS01570	SM00490	helicase superfamily c-terminal domain
A4R38_RS01575	SM00354	helix_turn _helix lactose operon repressor
A4R38_RS01590	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS01590	SM01086	C-terminal, D2-small domain, of ClpB protein
A4R38_RS01680	SM00448	cheY-homologous receiver domain
A4R38_RS01680	SM00862	Transcriptional regulatory protein, C terminal
A4R38_RS01685	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A4R38_RS01685	SM00387	Histidine kinase-like ATPases
A4R38_RS01685	SM00388	His Kinase A (phosphoacceptor) domain
A4R38_RS01715	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS01720	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS01740	SM01007	Class II Aldolase and Adducin N-terminal domain
A4R38_RS01795	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A4R38_RS01850	SM00530	Helix-turn-helix XRE-family like proteins 
A4R38_RS01885	SM00420	helix_turn_helix, Deoxyribose operon repressor
A4R38_RS01885	SM01134	A4R38_RS01885
A4R38_RS01900	SM01133	A4R38_RS01900
A4R38_RS01950	SM01230	A4R38_RS01950
A4R38_RS01955	SM00091	PAS domain
A4R38_RS01955	SM00387	Histidine kinase-like ATPases
A4R38_RS01955	SM00388	His Kinase A (phosphoacceptor) domain
A4R38_RS01960	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS01960	SM00448	cheY-homologous receiver domain
A4R38_RS01970	SM00729	Elongator protein 3, MiaB family, Radical SAM
A4R38_RS01985	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
A4R38_RS01985	SM00474	3'-5' exonuclease
A4R38_RS01985	SM00475	5'-3' exonuclease
A4R38_RS01985	SM00482	DNA polymerase A domain
A4R38_RS01995	SM00563	Phosphate acyltransferases
A4R38_RS02090	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
A4R38_RS02135	SM00346	helix_turn_helix isocitrate lyase regulation
A4R38_RS02225	SM00861	Transketolase, pyrimidine binding domain
A4R38_RS02280	SM00341	Helicase and RNase D C-terminal
A4R38_RS02280	SM00487	DEAD-like helicases superfamily
A4R38_RS02280	SM00490	helicase superfamily c-terminal domain
A4R38_RS02280	SM00956	A4R38_RS02280
A4R38_RS02360	SM01219	A4R38_RS02360
A4R38_RS02470	SM00984	UDP binding domain
A4R38_RS02495	SM00357	Cold shock protein domain
A4R38_RS02495	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS02495	SM00959	Rho termination factor, N-terminal domain
A4R38_RS02510	SM00487	DEAD-like helicases superfamily
A4R38_RS02510	SM00490	helicase superfamily c-terminal domain
A4R38_RS02570	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS02615	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4R38_RS02615	SM00895	A4R38_RS02615
A4R38_RS02625	SM00354	helix_turn _helix lactose operon repressor
A4R38_RS02645	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS02660	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS02665	SM00327	von Willebrand factor (vWF) type A domain
A4R38_RS02675	SM00344	helix_turn_helix ASNC type
A4R38_RS02685	SM01228	A4R38_RS02685
A4R38_RS02730	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS02765	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS02775	SM01061	CAT RNA binding domain
A4R38_RS02870	SM01234	A4R38_RS02870
A4R38_RS02885	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS02885	SM00760	Bacterial dnaA protein helix-turn-helix domain
A4R38_RS02890	SM00480	DNA polymerase III beta subunit
A4R38_RS02900	SM00387	Histidine kinase-like ATPases
A4R38_RS02900	SM00433	TopoisomeraseII
A4R38_RS02925	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4R38_RS02925	SM00895	A4R38_RS02925
A4R38_RS02940	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
A4R38_RS02980	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS03040	SM00421	helix_turn_helix, Lux Regulon
A4R38_RS03040	SM00448	cheY-homologous receiver domain
A4R38_RS03045	SM00387	Histidine kinase-like ATPases
A4R38_RS03075	SM00530	Helix-turn-helix XRE-family like proteins 
A4R38_RS03185	SM00869	Autotransporter beta-domain
A4R38_RS03250	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS03365	SM00354	helix_turn _helix lactose operon repressor
A4R38_RS03450	SM00487	DEAD-like helicases superfamily
A4R38_RS03450	SM00490	helicase superfamily c-terminal domain
A4R38_RS03460	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A4R38_RS03460	SM00954	Region found in RelA / SpoT proteins
A4R38_RS03465	SM01409	A4R38_RS03465
A4R38_RS03470	SM00072	Guanylate kinase homologues.
A4R38_RS03475	SM00532	Ligase N family
A4R38_RS03530	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
A4R38_RS03530	SM01232	A4R38_RS03530
A4R38_RS03620	SM00829	Enoylreductase
A4R38_RS03645	SM00450	Rhodanese Homology Domain
A4R38_RS03665	SM00971	Serine acetyltransferase, N-terminal
A4R38_RS03680	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4R38_RS03680	SM00895	A4R38_RS03680
A4R38_RS03775	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS03780	SM01007	Class II Aldolase and Adducin N-terminal domain
A4R38_RS03790	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
A4R38_RS03830	SM00346	helix_turn_helix isocitrate lyase regulation
A4R38_RS03845	SM00642	Alpha-amylase domain
A4R38_RS03850	SM00047	Lysozyme subfamily 2
A4R38_RS03855	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS03865	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS03930	SM00357	Cold shock protein domain
A4R38_RS03935	SM00530	Helix-turn-helix XRE-family like proteins 
A4R38_RS04015	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS04020	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS04105	SM00028	Tetratricopeptide repeats
A4R38_RS04110	SM00052	Putative diguanylate phosphodiesterase
A4R38_RS04110	SM00267	diguanylate cyclase
A4R38_RS04135	SM00052	Putative diguanylate phosphodiesterase
A4R38_RS04160	SM00421	helix_turn_helix, Lux Regulon
A4R38_RS04170	SM01235	A4R38_RS04170
A4R38_RS04180	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS04185	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS04230	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS04250	SM00729	Elongator protein 3, MiaB family, Radical SAM
A4R38_RS04280	SM00421	helix_turn_helix, Lux Regulon
A4R38_RS04360	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS04400	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4R38_RS04400	SM00866	A4R38_RS04400
A4R38_RS04410	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS04415	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS04490	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS04490	SM00962	SRP54-type protein, GTPase domain
A4R38_RS04490	SM00963	SRP54-type protein, helical bundle domain
A4R38_RS04495	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS04545	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS04550	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS04575	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS04615	SM00354	helix_turn _helix lactose operon repressor
A4R38_RS04630	SM00487	DEAD-like helicases superfamily
A4R38_RS04630	SM00490	helicase superfamily c-terminal domain
A4R38_RS04645	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A4R38_RS04650	SM00642	Alpha-amylase domain
A4R38_RS04655	SM00642	Alpha-amylase domain
A4R38_RS04695	SM00450	Rhodanese Homology Domain
A4R38_RS04705	SM00420	helix_turn_helix, Deoxyribose operon repressor
A4R38_RS04705	SM01134	A4R38_RS04705
A4R38_RS04720	SM00421	helix_turn_helix, Lux Regulon
A4R38_RS04770	SM00899	A4R38_RS04770
A4R38_RS04775	SM00316	Ribosomal protein S1-like RNA-binding domain
A4R38_RS04775	SM00732	Likely ribonuclease with RNase H fold.
A4R38_RS04785	SM00448	cheY-homologous receiver domain
A4R38_RS04785	SM00862	Transcriptional regulatory protein, C terminal
A4R38_RS04790	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A4R38_RS04790	SM00387	Histidine kinase-like ATPases
A4R38_RS04790	SM00388	His Kinase A (phosphoacceptor) domain
A4R38_RS04825	SM00363	S4 RNA-binding domain
A4R38_RS04870	SM00965	Secretin and TonB N terminus short domain
A4R38_RS05010	SM00100	Cyclic nucleotide-monophosphate binding domain
A4R38_RS05010	SM00419	helix_turn_helix, cAMP Regulatory protein
A4R38_RS05040	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS05105	SM00838	Elongation factor G C-terminus
A4R38_RS05105	SM00889	Elongation factor G, domain IV
A4R38_RS05115	SM00495	Chitin-binding domain type 3
A4R38_RS05175	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS05200	SM01403	A4R38_RS05200
A4R38_RS05220	SM01382	A4R38_RS05220
A4R38_RS05220	SM01383	A4R38_RS05220
A4R38_RS05235	SM00322	K homology RNA-binding domain
A4R38_RS05255	SM01374	A4R38_RS05255
A4R38_RS05260	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
A4R38_RS05325	SM00363	S4 RNA-binding domain
A4R38_RS05325	SM01390	A4R38_RS05325
A4R38_RS05330	SM00662	RNA polymerases D
A4R38_RS05345	SM00422	helix_turn_helix, mercury resistance
A4R38_RS05450	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS05465	SM00062	Bacterial periplasmic substrate-binding proteins
A4R38_RS05535	SM00420	helix_turn_helix, Deoxyribose operon repressor
A4R38_RS05535	SM01134	A4R38_RS05535
A4R38_RS05550	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS05570	SM00878	Biotin carboxylase C-terminal domain
A4R38_RS05590	SM00829	Enoylreductase
A4R38_RS05595	SM00052	Putative diguanylate phosphodiesterase
A4R38_RS05595	SM00267	diguanylate cyclase
A4R38_RS05625	SM00316	Ribosomal protein S1-like RNA-binding domain
A4R38_RS05680	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A4R38_RS05685	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A4R38_RS05720	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4R38_RS05720	SM00895	A4R38_RS05720
A4R38_RS05725	SM01130	A4R38_RS05725
A4R38_RS05760	SM00729	Elongator protein 3, MiaB family, Radical SAM
A4R38_RS05765	SM00073	Histidine Phosphotransfer domain
A4R38_RS05765	SM00091	PAS domain
A4R38_RS05765	SM00387	Histidine kinase-like ATPases
A4R38_RS05765	SM00388	His Kinase A (phosphoacceptor) domain
A4R38_RS05765	SM00448	cheY-homologous receiver domain
A4R38_RS05810	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS05840	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS05915	SM01103	A4R38_RS05915
A4R38_RS05925	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS05975	SM00316	Ribosomal protein S1-like RNA-binding domain
A4R38_RS05995	SM01387	A4R38_RS05995
A4R38_RS06000	SM00316	Ribosomal protein S1-like RNA-binding domain
A4R38_RS06000	SM00322	K homology RNA-binding domain
A4R38_RS06005	SM00028	Tetratricopeptide repeats
A4R38_RS06010	SM00487	DEAD-like helicases superfamily
A4R38_RS06010	SM00490	helicase superfamily c-terminal domain
A4R38_RS06050	SM00465	GIY-YIG type nucleases (URI domain)
A4R38_RS06065	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A4R38_RS06075	SM00749	bacterial OsmY and nodulation domain
A4R38_RS06160	SM00420	helix_turn_helix, Deoxyribose operon repressor
A4R38_RS06160	SM01134	A4R38_RS06160
A4R38_RS06175	SM00858	A4R38_RS06175
A4R38_RS06320	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4R38_RS06320	SM00895	A4R38_RS06320
A4R38_RS06335	SM00858	A4R38_RS06335
A4R38_RS06385	SM00530	Helix-turn-helix XRE-family like proteins 
A4R38_RS06415	SM01038	Beta galactosidase small chain
A4R38_RS06420	SM00354	helix_turn _helix lactose operon repressor
A4R38_RS06435	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A4R38_RS06435	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A4R38_RS06465	SM00400	zinc finger
A4R38_RS06465	SM00493	A4R38_RS06465
A4R38_RS06465	SM00766	DNA primase DnaG DnaB-binding
A4R38_RS06500	SM01207	A4R38_RS06500
A4R38_RS06505	SM00905	Dihydroneopterin aldolase
A4R38_RS06520	SM00287	Bacterial SH3 domain homologues
A4R38_RS06530	SM01118	A4R38_RS06530
A4R38_RS06550	SM00244	prohibitin homologues
A4R38_RS06665	SM00387	Histidine kinase-like ATPases
A4R38_RS06665	SM00433	TopoisomeraseII
A4R38_RS06675	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS06725	SM00387	Histidine kinase-like ATPases
A4R38_RS06725	SM00388	His Kinase A (phosphoacceptor) domain
A4R38_RS06730	SM00448	cheY-homologous receiver domain
A4R38_RS06730	SM00862	Transcriptional regulatory protein, C terminal
A4R38_RS06740	SM00871	Bacterial transcription activator, effector binding domain
A4R38_RS06750	SM00434	DNA Topoisomerase IV
A4R38_RS06755	SM00563	Phosphate acyltransferases
A4R38_RS06795	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4R38_RS06795	SM00895	A4R38_RS06795
A4R38_RS06800	SM00729	Elongator protein 3, MiaB family, Radical SAM
A4R38_RS06830	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS07010	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4R38_RS07010	SM00895	A4R38_RS07010
A4R38_RS07050	SM01276	A4R38_RS07050
A4R38_RS07075	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS07125	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS07175	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS07265	SM00869	Autotransporter beta-domain
A4R38_RS07345	SM01130	A4R38_RS07345
A4R38_RS07380	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4R38_RS07380	SM00895	A4R38_RS07380
A4R38_RS07525	SM00869	Autotransporter beta-domain
A4R38_RS07550	SM01006	Siderophore biosynthesis protein domain
A4R38_RS07655	SM00347	helix_turn_helix multiple antibiotic resistance protein
A4R38_RS07665	SM00028	Tetratricopeptide repeats
A4R38_RS07705	SM00478	endonuclease III
A4R38_RS07730	SM00870	A4R38_RS07730
A4R38_RS07740	SM00729	Elongator protein 3, MiaB family, Radical SAM
A4R38_RS07750	SM01152	A4R38_RS07750
A4R38_RS07765	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS07770	SM00732	Likely ribonuclease with RNase H fold.
A4R38_RS07795	SM00731	SprT homologues.
A4R38_RS07845	SM00861	Transketolase, pyrimidine binding domain
A4R38_RS07850	SM00244	prohibitin homologues
A4R38_RS07885	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS07890	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS07910	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
A4R38_RS07995	SM01011	Aminopeptidase P, N-terminal domain
A4R38_RS08030	SM01022	A4R38_RS08030
A4R38_RS08075	SM00937	A4R38_RS08075
A4R38_RS08130	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
A4R38_RS08135	SM01092	CO dehydrogenase flavoprotein C-terminal domain
A4R38_RS08190	SM00091	PAS domain
A4R38_RS08190	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS08200	SM01092	CO dehydrogenase flavoprotein C-terminal domain
A4R38_RS08205	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
A4R38_RS08210	SM00257	Lysin motif
A4R38_RS08260	SM00354	helix_turn _helix lactose operon repressor
A4R38_RS08265	SM00563	Phosphate acyltransferases
A4R38_RS08290	SM00927	DNA mismatch repair enzyme MutH
A4R38_RS08310	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A4R38_RS08370	SM00646	A4R38_RS08370
A4R38_RS08375	SM01061	CAT RNA binding domain
A4R38_RS08405	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS08510	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS08510	SM01086	C-terminal, D2-small domain, of ClpB protein
A4R38_RS08560	SM00925	MltA specific insert domain
A4R38_RS08600	SM00420	helix_turn_helix, Deoxyribose operon repressor
A4R38_RS08600	SM01134	A4R38_RS08600
A4R38_RS08625	SM01007	Class II Aldolase and Adducin N-terminal domain
A4R38_RS08635	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
A4R38_RS08635	SM00475	5'-3' exonuclease
A4R38_RS08690	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
A4R38_RS08695	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
A4R38_RS08700	SM00073	Histidine Phosphotransfer domain
A4R38_RS08700	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A4R38_RS08700	SM00387	Histidine kinase-like ATPases
A4R38_RS08700	SM00388	His Kinase A (phosphoacceptor) domain
A4R38_RS08700	SM00448	cheY-homologous receiver domain
A4R38_RS08710	SM00954	Region found in RelA / SpoT proteins
A4R38_RS08725	SM01192	A4R38_RS08725
A4R38_RS08725	SM01193	A4R38_RS08725
A4R38_RS08745	SM00354	helix_turn _helix lactose operon repressor
A4R38_RS08750	SM00640	Glycosyl hydrolases family 32
A4R38_RS08795	SM00893	Electron transfer flavoprotein domain
A4R38_RS08900	SM00257	Lysin motif
A4R38_RS08915	SM00849	Metallo-beta-lactamase superfamily
A4R38_RS08930	SM01007	Class II Aldolase and Adducin N-terminal domain
A4R38_RS08945	SM00420	helix_turn_helix, Deoxyribose operon repressor
A4R38_RS08945	SM01134	A4R38_RS08945
A4R38_RS08955	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
A4R38_RS08955	SM00534	ATPase domain of DNA mismatch repair MUTS family
A4R38_RS08970	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A4R38_RS08970	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS09050	SM00530	Helix-turn-helix XRE-family like proteins 
A4R38_RS09080	SM00849	Metallo-beta-lactamase superfamily
A4R38_RS09085	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A4R38_RS09085	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS09095	SM00420	helix_turn_helix, Deoxyribose operon repressor
A4R38_RS09095	SM01134	A4R38_RS09095
A4R38_RS09140	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS09155	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A4R38_RS09230	SM00347	helix_turn_helix multiple antibiotic resistance protein
A4R38_RS09260	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS09300	SM00528	Domain in histone-like proteins of HNS family
A4R38_RS09305	SM00450	Rhodanese Homology Domain
A4R38_RS09310	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A4R38_RS09320	SM00257	Lysin motif
A4R38_RS09320	SM00749	bacterial OsmY and nodulation domain
A4R38_RS09325	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4R38_RS09325	SM00895	A4R38_RS09325
A4R38_RS09395	SM01091	Transporter associated domain
A4R38_RS09405	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS09405	SM00962	SRP54-type protein, GTPase domain
A4R38_RS09405	SM00963	SRP54-type protein, helical bundle domain
A4R38_RS09435	SM00267	diguanylate cyclase
A4R38_RS09455	SM00830	Chorismate mutase type II
A4R38_RS09460	SM00830	Chorismate mutase type II
A4R38_RS09480	SM00363	S4 RNA-binding domain
A4R38_RS09490	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS09490	SM01086	C-terminal, D2-small domain, of ClpB protein
A4R38_RS09525	SM00155	Phospholipase D. Active site motifs.
A4R38_RS09530	SM00881	CoA binding domain
A4R38_RS09535	SM01144	A4R38_RS09535
A4R38_RS09550	SM00967	RNA 2'-O ribose methyltransferase substrate binding
A4R38_RS09555	SM00986	Uracil DNA glycosylase superfamily
A4R38_RS09555	SM00987	UreE urease accessory protein, C-terminal domain 
A4R38_RS09575	SM00487	DEAD-like helicases superfamily
A4R38_RS09575	SM00490	helicase superfamily c-terminal domain
A4R38_RS09625	SM00358	Double-stranded RNA binding motif
A4R38_RS09625	SM00535	Ribonuclease III family
A4R38_RS09680	SM00062	Bacterial periplasmic substrate-binding proteins
A4R38_RS09685	SM01211	A4R38_RS09685
A4R38_RS09690	SM00387	Histidine kinase-like ATPases
A4R38_RS09690	SM00388	His Kinase A (phosphoacceptor) domain
A4R38_RS09700	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS09700	SM00448	cheY-homologous receiver domain
A4R38_RS09705	SM00938	Nitrogen regulatory protein P-II
A4R38_RS09725	SM00028	Tetratricopeptide repeats
A4R38_RS09735	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS09745	SM00829	Enoylreductase
A4R38_RS09805	SM00271	DnaJ molecular chaperone homology domain
A4R38_RS09835	SM00450	Rhodanese Homology Domain
A4R38_RS09840	SM01359	A4R38_RS09840
A4R38_RS09840	SM01360	A4R38_RS09840
A4R38_RS09850	SM00562	A4R38_RS09850
A4R38_RS09860	SM00530	Helix-turn-helix XRE-family like proteins 
A4R38_RS09880	SM00564	beta-propeller repeat
A4R38_RS09915	SM00116	Domain in cystathionine beta-synthase and other proteins.
A4R38_RS09915	SM01240	A4R38_RS09915
A4R38_RS09945	SM00052	Putative diguanylate phosphodiesterase
A4R38_RS09945	SM00267	diguanylate cyclase
A4R38_RS10010	SM01130	A4R38_RS10010
A4R38_RS10070	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A4R38_RS10070	SM00387	Histidine kinase-like ATPases
A4R38_RS10090	SM00861	Transketolase, pyrimidine binding domain
A4R38_RS10100	SM00919	Malic enzyme, NAD binding domain
A4R38_RS10100	SM01274	A4R38_RS10100
A4R38_RS10105	SM00877	A4R38_RS10105
A4R38_RS10130	SM00877	A4R38_RS10130
A4R38_RS10175	SM00877	A4R38_RS10175
A4R38_RS10180	SM00877	A4R38_RS10180
A4R38_RS10185	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS10195	SM00646	A4R38_RS10195
A4R38_RS10230	SM00822	A4R38_RS10230
A4R38_RS10250	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS10295	SM00771	ZipA, C-terminal domain (FtsZ-binding)
A4R38_RS10300	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A4R38_RS10300	SM00292	breast cancer carboxy-terminal domain
A4R38_RS10300	SM00532	Ligase N family
A4R38_RS10390	SM00052	Putative diguanylate phosphodiesterase
A4R38_RS10390	SM00267	diguanylate cyclase
A4R38_RS10450	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS10455	SM00448	cheY-homologous receiver domain
A4R38_RS10455	SM00850	LytTr DNA-binding domain
A4R38_RS10460	SM00387	Histidine kinase-like ATPases
A4R38_RS10515	SM00062	Bacterial periplasmic substrate-binding proteins
A4R38_RS10515	SM00073	Histidine Phosphotransfer domain
A4R38_RS10515	SM00387	Histidine kinase-like ATPases
A4R38_RS10515	SM00388	His Kinase A (phosphoacceptor) domain
A4R38_RS10515	SM00448	cheY-homologous receiver domain
A4R38_RS10520	SM00421	helix_turn_helix, Lux Regulon
A4R38_RS10520	SM00448	cheY-homologous receiver domain
A4R38_RS10635	SM00463	Small MutS-related domain
A4R38_RS10675	SM00825	Beta-ketoacyl synthase
A4R38_RS10695	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A4R38_RS10740	SM00062	Bacterial periplasmic substrate-binding proteins
A4R38_RS10745	SM00062	Bacterial periplasmic substrate-binding proteins
A4R38_RS10760	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS10770	SM00905	Dihydroneopterin aldolase
A4R38_RS10835	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A4R38_RS10870	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
A4R38_RS10875	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A4R38_RS10875	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
A4R38_RS10925	SM00327	von Willebrand factor (vWF) type A domain
A4R38_RS10930	SM00849	Metallo-beta-lactamase superfamily
A4R38_RS10965	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
A4R38_RS11030	SM00852	Probable molybdopterin binding domain
A4R38_RS11035	SM00346	helix_turn_helix isocitrate lyase regulation
A4R38_RS11040	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
A4R38_RS11115	SM00869	Autotransporter beta-domain
A4R38_RS11125	SM00434	DNA Topoisomerase IV
A4R38_RS11140	SM01359	A4R38_RS11140
A4R38_RS11140	SM01360	A4R38_RS11140
A4R38_RS11195	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS11405	SM00857	Resolvase, N terminal domain
A4R38_RS11430	SM00882	Coenzyme A transferase
A4R38_RS11435	SM00882	Coenzyme A transferase
A4R38_RS11440	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS11440	SM00448	cheY-homologous receiver domain
A4R38_RS11445	SM00091	PAS domain
A4R38_RS11445	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A4R38_RS11445	SM00387	Histidine kinase-like ATPases
A4R38_RS11445	SM00388	His Kinase A (phosphoacceptor) domain
A4R38_RS11450	SM00387	Histidine kinase-like ATPases
A4R38_RS11450	SM00388	His Kinase A (phosphoacceptor) domain
A4R38_RS11450	SM00448	cheY-homologous receiver domain
A4R38_RS11455	SM00421	helix_turn_helix, Lux Regulon
A4R38_RS11455	SM00448	cheY-homologous receiver domain
A4R38_RS11460	SM00387	Histidine kinase-like ATPases
A4R38_RS11485	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS11495	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS11525	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A4R38_RS11550	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS11590	SM00421	helix_turn_helix, Lux Regulon
A4R38_RS11590	SM00448	cheY-homologous receiver domain
A4R38_RS11635	SM00487	DEAD-like helicases superfamily
A4R38_RS11635	SM00490	helicase superfamily c-terminal domain
A4R38_RS11640	SM00363	S4 RNA-binding domain
A4R38_RS11655	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS11675	SM00052	Putative diguanylate phosphodiesterase
A4R38_RS11685	SM00014	Acid phosphatase homologues
A4R38_RS11690	SM00833	Cobalamin synthesis protein cobW C-terminal domain
A4R38_RS11700	SM00841	Elongation factor P, C-terminal
A4R38_RS11700	SM01185	A4R38_RS11700
A4R38_RS11745	SM00100	Cyclic nucleotide-monophosphate binding domain
A4R38_RS11760	SM00518	AP endonuclease family 2
A4R38_RS11815	SM00354	helix_turn _helix lactose operon repressor
A4R38_RS11825	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS11910	SM01217	A4R38_RS11910
A4R38_RS11925	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS11940	SM00422	helix_turn_helix, mercury resistance
A4R38_RS11945	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A4R38_RS11950	SM00448	cheY-homologous receiver domain
A4R38_RS11950	SM00850	LytTr DNA-binding domain
A4R38_RS11980	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS12000	SM00773	Proposed nucleic acid binding domain
A4R38_RS12005	SM00773	Proposed nucleic acid binding domain
A4R38_RS12075	SM00641	Glycosyl hydrolases family 25
A4R38_RS12080	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4R38_RS12080	SM00866	A4R38_RS12080
A4R38_RS12100	SM01133	A4R38_RS12100
A4R38_RS12130	SM00829	Enoylreductase
A4R38_RS12135	SM00420	helix_turn_helix, Deoxyribose operon repressor
A4R38_RS12135	SM01134	A4R38_RS12135
A4R38_RS12140	SM00046	Diacylglycerol kinase catalytic domain (presumed)
A4R38_RS12160	SM00448	cheY-homologous receiver domain
A4R38_RS12160	SM00862	Transcriptional regulatory protein, C terminal
A4R38_RS12165	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A4R38_RS12165	SM00387	Histidine kinase-like ATPases
A4R38_RS12165	SM00388	His Kinase A (phosphoacceptor) domain
A4R38_RS12190	SM00327	von Willebrand factor (vWF) type A domain
A4R38_RS12210	SM00478	endonuclease III
A4R38_RS12210	SM01009	AlkA N-terminal domain
A4R38_RS12215	SM00052	Putative diguanylate phosphodiesterase
A4R38_RS12215	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A4R38_RS12215	SM00091	PAS domain
A4R38_RS12215	SM00267	diguanylate cyclase
A4R38_RS12235	SM01091	Transporter associated domain
A4R38_RS12245	SM00226	Low molecular weight phosphatase family
A4R38_RS12390	SM01350	A4R38_RS12390
A4R38_RS12395	SM00984	UDP binding domain
A4R38_RS12470	SM00479	A4R38_RS12470
A4R38_RS12475	SM00936	Penicillin-binding protein 5, C-terminal domain 
A4R38_RS12480	SM00871	Bacterial transcription activator, effector binding domain
A4R38_RS12510	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS12600	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS12740	SM00420	helix_turn_helix, Deoxyribose operon repressor
A4R38_RS12775	SM00470	ParB-like nuclease domain
A4R38_RS12870	SM00634	Bacterial Ig-like domain (group 1)
A4R38_RS12905	SM00822	A4R38_RS12905
A4R38_RS12905	SM00823	Phosphopantetheine attachment site
A4R38_RS12905	SM00824	Thioesterase
A4R38_RS12905	SM00825	Beta-ketoacyl synthase
A4R38_RS12905	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
A4R38_RS12910	SM00823	Phosphopantetheine attachment site
A4R38_RS12915	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS12920	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS12925	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS12985	SM00095	Transthyretin
A4R38_RS12990	SM00448	cheY-homologous receiver domain
A4R38_RS12990	SM00862	Transcriptional regulatory protein, C terminal
A4R38_RS12995	SM00387	Histidine kinase-like ATPases
A4R38_RS12995	SM00388	His Kinase A (phosphoacceptor) domain
A4R38_RS13020	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A4R38_RS13050	SM00267	diguanylate cyclase
A4R38_RS13070	SM00421	helix_turn_helix, Lux Regulon
A4R38_RS13120	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS13160	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS13195	SM00642	Alpha-amylase domain
A4R38_RS13230	SM00062	Bacterial periplasmic substrate-binding proteins
A4R38_RS13230	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
A4R38_RS13245	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS13250	SM00421	helix_turn_helix, Lux Regulon
A4R38_RS13265	SM00421	helix_turn_helix, Lux Regulon
A4R38_RS13265	SM00448	cheY-homologous receiver domain
A4R38_RS13270	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A4R38_RS13270	SM00465	GIY-YIG type nucleases (URI domain)
A4R38_RS13340	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS13385	SM00073	Histidine Phosphotransfer domain
A4R38_RS13385	SM00260	Two component signalling adaptor domain
A4R38_RS13385	SM00387	Histidine kinase-like ATPases
A4R38_RS13385	SM01231	A4R38_RS13385
A4R38_RS13390	SM00260	Two component signalling adaptor domain
A4R38_RS13395	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A4R38_RS13395	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A4R38_RS13395	SM00319	Homologues of the ligand binding domain of Tar
A4R38_RS13400	SM00138	Methyltransferase, chemotaxis proteins 
A4R38_RS13405	SM00448	cheY-homologous receiver domain
A4R38_RS13410	SM00448	cheY-homologous receiver domain
A4R38_RS13435	SM00836	DALR anticodon binding domain
A4R38_RS13435	SM01016	Arginyl tRNA synthetase N terminal dom
A4R38_RS13510	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A4R38_RS13515	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS13535	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS13545	SM00257	Lysin motif
A4R38_RS13615	SM00479	A4R38_RS13615
A4R38_RS13680	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A4R38_RS13685	SM00945	ProQ/FINO family
A4R38_RS13690	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A4R38_RS13690	SM00245	tail specific protease
A4R38_RS13705	SM00346	helix_turn_helix isocitrate lyase regulation
A4R38_RS13735	SM00357	Cold shock protein domain
A4R38_RS13780	SM01091	Transporter associated domain
A4R38_RS13785	SM00052	Putative diguanylate phosphodiesterase
A4R38_RS13825	SM00487	DEAD-like helicases superfamily
A4R38_RS13825	SM00491	A4R38_RS13825
A4R38_RS13845	SM00341	Helicase and RNase D C-terminal
A4R38_RS13845	SM00474	3'-5' exonuclease
A4R38_RS13885	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A4R38_RS13885	SM00267	diguanylate cyclase
A4R38_RS13905	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS13925	SM00267	diguanylate cyclase
A4R38_RS13930	SM00267	diguanylate cyclase
A4R38_RS13940	SM00763	PrkA AAA domain
A4R38_RS13960	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
A4R38_RS13985	SM00829	Enoylreductase
A4R38_RS14005	SM00420	helix_turn_helix, Deoxyribose operon repressor
A4R38_RS14005	SM01134	A4R38_RS14005
A4R38_RS14020	SM00870	A4R38_RS14020
A4R38_RS14055	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
A4R38_RS14055	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
A4R38_RS14055	SM00493	A4R38_RS14055
A4R38_RS14060	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
A4R38_RS14080	SM00450	Rhodanese Homology Domain
A4R38_RS14085	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS14160	SM00465	GIY-YIG type nucleases (URI domain)
A4R38_RS14195	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS14210	SM01060	A4R38_RS14210
A4R38_RS14270	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A4R38_RS14300	SM00873	B3/4 domain
A4R38_RS14300	SM00874	tRNA synthetase B5 domain
A4R38_RS14300	SM00896	Ferredoxin-fold anticodon binding domain
A4R38_RS14305	SM00411	bacterial (prokaryotic) histone like domain
A4R38_RS14320	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS14380	SM00893	Electron transfer flavoprotein domain
A4R38_RS14385	SM00893	Electron transfer flavoprotein domain
A4R38_RS14395	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS14405	SM00882	Coenzyme A transferase
A4R38_RS14470	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS14490	SM00257	Lysin motif
A4R38_RS14515	SM00790	Aldehyde ferredoxin oxidoreductase, N-terminal domain
A4R38_RS14590	SM00354	helix_turn _helix lactose operon repressor
A4R38_RS14625	SM00479	A4R38_RS14625
A4R38_RS14680	SM00347	helix_turn_helix multiple antibiotic resistance protein
A4R38_RS14705	SM00363	S4 RNA-binding domain
A4R38_RS14730	SM00478	endonuclease III
A4R38_RS14730	SM00525	A4R38_RS14730
A4R38_RS14740	SM00900	A4R38_RS14740
A4R38_RS14800	SM00354	helix_turn _helix lactose operon repressor
A4R38_RS14855	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A4R38_RS14855	SM00387	Histidine kinase-like ATPases
A4R38_RS14855	SM00388	His Kinase A (phosphoacceptor) domain
A4R38_RS14860	SM00448	cheY-homologous receiver domain
A4R38_RS14860	SM00862	Transcriptional regulatory protein, C terminal
A4R38_RS14885	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
A4R38_RS14885	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
A4R38_RS14970	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A4R38_RS15000	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
A4R38_RS15045	SM00530	Helix-turn-helix XRE-family like proteins 
A4R38_RS15120	SM00507	HNH nucleases
A4R38_RS15130	SM00357	Cold shock protein domain
A4R38_RS15135	SM00357	Cold shock protein domain
A4R38_RS15160	SM00357	Cold shock protein domain
A4R38_RS15240	SM00635	Bacterial Ig-like domain 2
A4R38_RS15270	SM00232	JAB/MPN domain
A4R38_RS15280	SM00060	Fibronectin type 3 domain
A4R38_RS15310	SM00857	Resolvase, N terminal domain
A4R38_RS15335	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4R38_RS15335	SM00895	A4R38_RS15335
A4R38_RS15355	SM00267	diguanylate cyclase
A4R38_RS15380	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS15385	SM00347	helix_turn_helix multiple antibiotic resistance protein
A4R38_RS15420	SM00267	diguanylate cyclase
A4R38_RS15445	SM00530	Helix-turn-helix XRE-family like proteins 
A4R38_RS15485	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS15530	SM00052	Putative diguanylate phosphodiesterase
A4R38_RS15530	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A4R38_RS15530	SM00091	PAS domain
A4R38_RS15530	SM00267	diguanylate cyclase
A4R38_RS15550	SM00919	Malic enzyme, NAD binding domain
A4R38_RS15550	SM01274	A4R38_RS15550
A4R38_RS15555	SM00829	Enoylreductase
A4R38_RS15565	SM00530	Helix-turn-helix XRE-family like proteins 
A4R38_RS15585	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A4R38_RS15600	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A4R38_RS15630	SM00903	Flavin reductase like domain
A4R38_RS15700	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS15710	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4R38_RS15715	SM00530	Helix-turn-helix XRE-family like proteins 
A4R38_RS15730	SM00530	Helix-turn-helix XRE-family like proteins 
A4R38_RS15780	SM01150	A4R38_RS15780
A4R38_RS15815	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
A4R38_RS15830	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS15830	SM00487	DEAD-like helicases superfamily
A4R38_RS15830	SM00490	helicase superfamily c-terminal domain
A4R38_RS15830	SM00847	Helicase associated domain (HA2)  Add an annotation
A4R38_RS15845	SM00710	Parallel beta-helix repeats
A4R38_RS15885	SM00890	Domain of unknown function
A4R38_RS15920	SM00487	DEAD-like helicases superfamily
A4R38_RS15920	SM00490	helicase superfamily c-terminal domain
A4R38_RS15935	SM00091	PAS domain
A4R38_RS15935	SM00267	diguanylate cyclase
A4R38_RS15940	SM00463	Small MutS-related domain
A4R38_RS15955	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS15975	SM00100	Cyclic nucleotide-monophosphate binding domain
A4R38_RS15975	SM00419	helix_turn_helix, cAMP Regulatory protein
A4R38_RS16030	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
A4R38_RS16040	SM00091	PAS domain
A4R38_RS16040	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS16055	SM00354	helix_turn _helix lactose operon repressor
A4R38_RS16065	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS16110	SM00642	Alpha-amylase domain
A4R38_RS16115	SM00450	Rhodanese Homology Domain
A4R38_RS16140	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS16170	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS16175	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS16215	SM00357	Cold shock protein domain
A4R38_RS16215	SM00955	A4R38_RS16215
A4R38_RS16225	SM00052	Putative diguanylate phosphodiesterase
A4R38_RS16225	SM00091	PAS domain
A4R38_RS16225	SM00267	diguanylate cyclase
A4R38_RS16235	SM00420	helix_turn_helix, Deoxyribose operon repressor
A4R38_RS16235	SM01134	A4R38_RS16235
A4R38_RS16250	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
A4R38_RS16255	SM00028	Tetratricopeptide repeats
A4R38_RS16265	SM00014	Acid phosphatase homologues
A4R38_RS16300	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
A4R38_RS16300	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
A4R38_RS16300	SM00493	A4R38_RS16300
A4R38_RS16325	SM00822	A4R38_RS16325
A4R38_RS16345	SM00363	S4 RNA-binding domain
A4R38_RS16360	SM00481	DNA polymerase alpha chain like domain
A4R38_RS16430	SM00155	Phospholipase D. Active site motifs.
A4R38_RS16440	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS16445	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS16490	SM00528	Domain in histone-like proteins of HNS family
A4R38_RS16500	SM00448	cheY-homologous receiver domain
A4R38_RS16550	SM00849	Metallo-beta-lactamase superfamily
A4R38_RS16580	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A4R38_RS16595	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A4R38_RS16595	SM00387	Histidine kinase-like ATPases
A4R38_RS16600	SM00421	helix_turn_helix, Lux Regulon
A4R38_RS16600	SM00448	cheY-homologous receiver domain
A4R38_RS16655	SM00937	A4R38_RS16655
A4R38_RS16675	SM01400	A4R38_RS16675
A4R38_RS16840	SM00091	PAS domain
A4R38_RS16840	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS16850	SM01120	A4R38_RS16850
A4R38_RS16875	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS16915	SM01091	Transporter associated domain
A4R38_RS16920	SM01005	Alanine racemase, C-terminal domain
A4R38_RS16935	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4R38_RS17055	SM00052	Putative diguanylate phosphodiesterase
A4R38_RS17080	SM00052	Putative diguanylate phosphodiesterase
A4R38_RS17080	SM01034	Sensors of blue-light using FAD
A4R38_RS17085	SM00422	helix_turn_helix, mercury resistance
A4R38_RS17105	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS17190	SM00635	Bacterial Ig-like domain 2
A4R38_RS17365	SM00530	Helix-turn-helix XRE-family like proteins 
A4R38_RS17375	SM01022	A4R38_RS17375
A4R38_RS17440	SM01329	A4R38_RS17440
A4R38_RS17470	SM00448	cheY-homologous receiver domain
A4R38_RS17470	SM00862	Transcriptional regulatory protein, C terminal
A4R38_RS17475	SM00387	Histidine kinase-like ATPases
A4R38_RS17480	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
A4R38_RS17495	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS17575	SM00635	Bacterial Ig-like domain 2
A4R38_RS17720	SM00507	HNH nucleases
A4R38_RS17900	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS17915	SM00487	DEAD-like helicases superfamily
A4R38_RS17915	SM00490	helicase superfamily c-terminal domain
A4R38_RS17915	SM00982	A4R38_RS17915
A4R38_RS17915	SM01058	CarD-like/TRCF domain
A4R38_RS17920	SM00257	Lysin motif
A4R38_RS18010	SM00825	Beta-ketoacyl synthase
A4R38_RS18020	SM00822	A4R38_RS18020
A4R38_RS18025	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
A4R38_RS18055	SM00363	S4 RNA-binding domain
A4R38_RS18065	SM00316	Ribosomal protein S1-like RNA-binding domain
A4R38_RS18080	SM00047	Lysozyme subfamily 2
A4R38_RS18125	SM00858	A4R38_RS18125
A4R38_RS18205	SM00867	YceI-like domain 
A4R38_RS18210	SM00450	Rhodanese Homology Domain
A4R38_RS18265	SM00155	Phospholipase D. Active site motifs.
A4R38_RS18270	SM00506	Appr-1"-p processing enzyme
A4R38_RS18300	SM00421	helix_turn_helix, Lux Regulon
A4R38_RS18330	SM00481	DNA polymerase alpha chain like domain
A4R38_RS18350	SM00267	diguanylate cyclase
A4R38_RS18355	SM00028	Tetratricopeptide repeats
A4R38_RS18440	SM00903	Flavin reductase like domain
A4R38_RS18475	SM00271	DnaJ molecular chaperone homology domain
A4R38_RS18500	SM00448	cheY-homologous receiver domain
A4R38_RS18500	SM00862	Transcriptional regulatory protein, C terminal
A4R38_RS18510	SM00073	Histidine Phosphotransfer domain
A4R38_RS18510	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A4R38_RS18510	SM00387	Histidine kinase-like ATPases
A4R38_RS18510	SM00388	His Kinase A (phosphoacceptor) domain
A4R38_RS18510	SM00448	cheY-homologous receiver domain
A4R38_RS18530	SM00357	Cold shock protein domain
A4R38_RS18535	SM00357	Cold shock protein domain
A4R38_RS18610	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
A4R38_RS18615	SM00992	Hemimethylated DNA-binding protein YccV like
A4R38_RS18620	SM00881	CoA binding domain
A4R38_RS18635	SM00851	MGS-like domain
A4R38_RS18710	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS18715	SM00981	A4R38_RS18715
A4R38_RS18740	SM00062	Bacterial periplasmic substrate-binding proteins
A4R38_RS18755	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS18790	SM00849	Metallo-beta-lactamase superfamily
A4R38_RS18855	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS18860	SM00849	Metallo-beta-lactamase superfamily
A4R38_RS18865	SM00411	bacterial (prokaryotic) histone like domain
A4R38_RS18870	SM00316	Ribosomal protein S1-like RNA-binding domain
A4R38_RS18940	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A4R38_RS18950	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS18960	SM00843	A4R38_RS18960
A4R38_RS18965	SM00344	helix_turn_helix ASNC type
A4R38_RS18975	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS18980	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS18990	SM00316	Ribosomal protein S1-like RNA-binding domain
A4R38_RS19000	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS19000	SM01086	C-terminal, D2-small domain, of ClpB protein
A4R38_RS19010	SM00357	Cold shock protein domain
A4R38_RS19015	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS19080	SM00644	A4R38_RS19080
A4R38_RS19095	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS19100	SM00062	Bacterial periplasmic substrate-binding proteins
A4R38_RS19100	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
A4R38_RS19115	SM00062	Bacterial periplasmic substrate-binding proteins
A4R38_RS19115	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
A4R38_RS19140	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS19215	SM00014	Acid phosphatase homologues
A4R38_RS19220	SM00420	helix_turn_helix, Deoxyribose operon repressor
A4R38_RS19220	SM01134	A4R38_RS19220
A4R38_RS19225	SM00936	Penicillin-binding protein 5, C-terminal domain 
A4R38_RS19245	SM00729	Elongator protein 3, MiaB family, Radical SAM
A4R38_RS19250	SM00267	diguanylate cyclase
A4R38_RS19275	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS19285	SM00852	Probable molybdopterin binding domain
A4R38_RS19315	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS19330	SM00529	Helix-turn-helix diphteria tox regulatory element
A4R38_RS19365	SM00062	Bacterial periplasmic substrate-binding proteins
A4R38_RS19365	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
A4R38_RS19375	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS19400	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
A4R38_RS19425	SM00487	DEAD-like helicases superfamily
A4R38_RS19425	SM00488	A4R38_RS19425
A4R38_RS19425	SM00491	A4R38_RS19425
A4R38_RS19440	SM00487	DEAD-like helicases superfamily
A4R38_RS19440	SM00490	helicase superfamily c-terminal domain
A4R38_RS19455	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS19480	SM00155	Phospholipase D. Active site motifs.
A4R38_RS19515	SM00852	Probable molybdopterin binding domain
A4R38_RS19520	SM00729	Elongator protein 3, MiaB family, Radical SAM
A4R38_RS19530	SM00487	DEAD-like helicases superfamily
A4R38_RS19530	SM00490	helicase superfamily c-terminal domain
A4R38_RS19550	SM00729	Elongator protein 3, MiaB family, Radical SAM
A4R38_RS19550	SM00876	Biotin and Thiamin Synthesis associated domain
A4R38_RS19600	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS19630	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS19655	SM00855	Phosphoglycerate mutase family
A4R38_RS19785	SM00028	Tetratricopeptide repeats
A4R38_RS19790	SM00872	Alpha mannosidase, middle domain
A4R38_RS19800	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4R38_RS19800	SM00866	A4R38_RS19800
A4R38_RS19805	SM00881	CoA binding domain
A4R38_RS19820	SM00861	Transketolase, pyrimidine binding domain
A4R38_RS19880	SM00858	A4R38_RS19880
A4R38_RS19885	SM00822	A4R38_RS19885
A4R38_RS19890	SM00829	Enoylreductase
A4R38_RS19900	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4R38_RS19900	SM00895	A4R38_RS19900
A4R38_RS19910	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
A4R38_RS19910	SM01232	A4R38_RS19910
A4R38_RS19920	SM00797	Allophanate hydrolase subunit 2
A4R38_RS19925	SM00796	Allophanate hydrolase subunit 1
A4R38_RS19975	SM00387	Histidine kinase-like ATPases
A4R38_RS19975	SM00388	His Kinase A (phosphoacceptor) domain
A4R38_RS19980	SM00448	cheY-homologous receiver domain
A4R38_RS19980	SM00862	Transcriptional regulatory protein, C terminal
A4R38_RS20055	SM00420	helix_turn_helix, Deoxyribose operon repressor
A4R38_RS20055	SM01134	A4R38_RS20055
A4R38_RS20075	SM01130	A4R38_RS20075
A4R38_RS20175	SM00729	Elongator protein 3, MiaB family, Radical SAM
A4R38_RS20190	SM00116	Domain in cystathionine beta-synthase and other proteins.
A4R38_RS20190	SM01091	Transporter associated domain
A4R38_RS20205	SM00062	Bacterial periplasmic substrate-binding proteins
A4R38_RS20220	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS20245	SM00671	Sel1-like repeats.
A4R38_RS20280	SM00855	Phosphoglycerate mutase family
A4R38_RS20310	SM00936	Penicillin-binding protein 5, C-terminal domain 
A4R38_RS20335	SM00729	Elongator protein 3, MiaB family, Radical SAM
A4R38_RS20355	SM00357	Cold shock protein domain
A4R38_RS20370	SM00448	cheY-homologous receiver domain
A4R38_RS20375	SM00091	PAS domain
A4R38_RS20375	SM00387	Histidine kinase-like ATPases
A4R38_RS20380	SM00764	Citrate lyase ligase C-terminal domain
A4R38_RS20455	SM00470	ParB-like nuclease domain
A4R38_RS20485	SM00822	A4R38_RS20485
A4R38_RS20525	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS20535	SM00823	Phosphopantetheine attachment site
A4R38_RS20535	SM00824	Thioesterase
A4R38_RS20540	SM00923	MbtH-like protein
A4R38_RS20565	SM00861	Transketolase, pyrimidine binding domain
A4R38_RS20595	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS20690	SM00448	cheY-homologous receiver domain
A4R38_RS20690	SM00862	Transcriptional regulatory protein, C terminal
A4R38_RS20695	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A4R38_RS20695	SM00387	Histidine kinase-like ATPases
A4R38_RS20695	SM00388	His Kinase A (phosphoacceptor) domain
A4R38_RS20705	SM00028	Tetratricopeptide repeats
A4R38_RS20760	SM00840	A4R38_RS20760
A4R38_RS20780	SM01001	AIR carboxylase
A4R38_RS20860	SM00346	helix_turn_helix isocitrate lyase regulation
A4R38_RS20875	SM00450	Rhodanese Homology Domain
A4R38_RS20910	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS20920	SM00822	A4R38_RS20920
A4R38_RS20935	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS20940	SM00244	prohibitin homologues
A4R38_RS20960	SM00422	helix_turn_helix, mercury resistance
A4R38_RS20980	SM00530	Helix-turn-helix XRE-family like proteins 
A4R38_RS21045	SM00387	Histidine kinase-like ATPases
A4R38_RS21050	SM00493	A4R38_RS21050
A4R38_RS21060	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS21115	SM01266	A4R38_RS21115
A4R38_RS21125	SM00052	Putative diguanylate phosphodiesterase
A4R38_RS21160	SM00938	Nitrogen regulatory protein P-II
A4R38_RS21165	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS21170	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS21175	SM00344	helix_turn_helix ASNC type
A4R38_RS21200	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A4R38_RS21210	SM00411	bacterial (prokaryotic) histone like domain
A4R38_RS21215	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS21215	SM00464	Found in ATP-dependent protease La (LON)
A4R38_RS21220	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS21220	SM00994	ClpX C4-type zinc finger
A4R38_RS21220	SM01086	C-terminal, D2-small domain, of ClpB protein
A4R38_RS21300	SM00981	A4R38_RS21300
A4R38_RS21315	SM00861	Transketolase, pyrimidine binding domain
A4R38_RS21365	SM00507	HNH nucleases
A4R38_RS21380	SM01323	A4R38_RS21380
A4R38_RS21400	SM00642	Alpha-amylase domain
A4R38_RS21415	SM00091	PAS domain
A4R38_RS21415	SM00387	Histidine kinase-like ATPases
A4R38_RS21415	SM00388	His Kinase A (phosphoacceptor) domain
A4R38_RS21420	SM00448	cheY-homologous receiver domain
A4R38_RS21420	SM00862	Transcriptional regulatory protein, C terminal
A4R38_RS21490	SM00267	diguanylate cyclase
A4R38_RS21500	SM00098	Alkaline phosphatase homologues
A4R38_RS21550	SM00869	Autotransporter beta-domain
A4R38_RS21555	SM01004	Delta-aminolevulinic acid dehydratase
A4R38_RS21570	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS21575	SM00062	Bacterial periplasmic substrate-binding proteins
A4R38_RS21585	SM00829	Enoylreductase
A4R38_RS21610	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A4R38_RS21635	SM00346	helix_turn_helix isocitrate lyase regulation
A4R38_RS21645	SM01038	Beta galactosidase small chain
A4R38_RS21655	SM01266	A4R38_RS21655
A4R38_RS21705	SM00829	Enoylreductase
A4R38_RS21735	SM00248	ankyrin repeats
A4R38_RS21750	SM00052	Putative diguanylate phosphodiesterase
A4R38_RS21750	SM00421	helix_turn_helix, Lux Regulon
A4R38_RS21790	SM00421	helix_turn_helix, Lux Regulon
A4R38_RS21800	SM00869	Autotransporter beta-domain
A4R38_RS21830	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS21855	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS21855	SM00871	Bacterial transcription activator, effector binding domain
A4R38_RS21860	SM00634	Bacterial Ig-like domain (group 1)
A4R38_RS21910	SM00421	helix_turn_helix, Lux Regulon
A4R38_RS21975	SM00487	DEAD-like helicases superfamily
A4R38_RS22005	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
A4R38_RS22065	SM01321	A4R38_RS22065
A4R38_RS22110	SM00479	A4R38_RS22110
A4R38_RS22125	SM00849	Metallo-beta-lactamase superfamily
A4R38_RS22130	SM00257	Lysin motif
A4R38_RS22190	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS22190	SM00930	A4R38_RS22190
A4R38_RS22235	SM01322	A4R38_RS22235
A4R38_RS22250	SM00977	TilS substrate C-terminal domain
A4R38_RS22270	SM00481	DNA polymerase alpha chain like domain
A4R38_RS22300	SM00935	Outer membrane protein (OmpH-like)
A4R38_RS22310	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A4R38_RS22355	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A4R38_RS22375	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A4R38_RS22380	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A4R38_RS22425	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS22460	SM00487	DEAD-like helicases superfamily
A4R38_RS22460	SM00490	helicase superfamily c-terminal domain
A4R38_RS22460	SM00847	Helicase associated domain (HA2)  Add an annotation
A4R38_RS22570	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS22575	SM00947	Carbonic anhydrase
A4R38_RS22585	SM00564	beta-propeller repeat
A4R38_RS22640	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4R38_RS22640	SM00895	A4R38_RS22640
A4R38_RS22695	SM00644	A4R38_RS22695
A4R38_RS22725	SM01240	A4R38_RS22725
A4R38_RS22750	SM00957	SecA DEAD-like domain
A4R38_RS22750	SM00958	SecA preprotein cross-linking domain
A4R38_RS22765	SM00864	Tubulin/FtsZ family, GTPase domain
A4R38_RS22765	SM00865	Tubulin/FtsZ family, C-terminal domain
A4R38_RS22770	SM00842	Cell division protein FtsA
A4R38_RS22840	SM00354	helix_turn _helix lactose operon repressor
A4R38_RS22870	SM00917	LeuA allosteric (dimerisation) domain
A4R38_RS22875	SM01329	A4R38_RS22875
A4R38_RS22910	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS22935	SM01130	A4R38_RS22935
A4R38_RS22940	SM00420	helix_turn_helix, Deoxyribose operon repressor
A4R38_RS22945	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS22960	SM01007	Class II Aldolase and Adducin N-terminal domain
A4R38_RS22965	SM00486	DNA polymerase type-B family
A4R38_RS22970	SM00487	DEAD-like helicases superfamily
A4R38_RS22970	SM00490	helicase superfamily c-terminal domain
A4R38_RS22980	SM00271	DnaJ molecular chaperone homology domain
A4R38_RS23000	SM00650	Ribosomal RNA adenine dimethylases
A4R38_RS23055	SM00893	Electron transfer flavoprotein domain
A4R38_RS23060	SM00893	Electron transfer flavoprotein domain
A4R38_RS23105	SM00851	MGS-like domain
A4R38_RS23105	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
A4R38_RS23110	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
A4R38_RS23160	SM00904	Riboflavin kinase
A4R38_RS23225	SM00271	DnaJ molecular chaperone homology domain
A4R38_RS23250	SM00852	Probable molybdopterin binding domain
A4R38_RS23310	SM00448	cheY-homologous receiver domain
A4R38_RS23310	SM00862	Transcriptional regulatory protein, C terminal
A4R38_RS23320	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A4R38_RS23320	SM00387	Histidine kinase-like ATPases
A4R38_RS23320	SM00388	His Kinase A (phosphoacceptor) domain
A4R38_RS23325	SM00448	cheY-homologous receiver domain
A4R38_RS23325	SM00862	Transcriptional regulatory protein, C terminal
A4R38_RS23335	SM00342	helix_turn_helix, arabinose operon control protein
A4R38_RS23335	SM00871	Bacterial transcription activator, effector binding domain
A4R38_RS23340	SM00855	Phosphoglycerate mutase family
A4R38_RS23360	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS23365	SM00530	Helix-turn-helix XRE-family like proteins 
A4R38_RS23375	SM00530	Helix-turn-helix XRE-family like proteins 
A4R38_RS23380	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS23400	SM00530	Helix-turn-helix XRE-family like proteins 
A4R38_RS23415	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
A4R38_RS23420	SM01133	A4R38_RS23420
A4R38_RS23455	SM00749	bacterial OsmY and nodulation domain
A4R38_RS23515	SM00421	helix_turn_helix, Lux Regulon
A4R38_RS23520	SM00421	helix_turn_helix, Lux Regulon
A4R38_RS23540	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS23555	SM00829	Enoylreductase
A4R38_RS23560	SM00895	A4R38_RS23560
A4R38_RS23570	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A4R38_RS23570	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A4R38_RS23570	SM00319	Homologues of the ligand binding domain of Tar
A4R38_RS23590	SM00833	Cobalamin synthesis protein cobW C-terminal domain
A4R38_RS23695	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4R38_RS23695	SM00895	A4R38_RS23695
A4R38_RS23800	SM00155	Phospholipase D. Active site motifs.
A4R38_RS23880	SM00420	helix_turn_helix, Deoxyribose operon repressor
A4R38_RS23880	SM01134	A4R38_RS23880
A4R38_RS23885	SM00346	helix_turn_helix isocitrate lyase regulation
A4R38_RS23890	SM01130	A4R38_RS23890
A4R38_RS23920	SM01007	Class II Aldolase and Adducin N-terminal domain
A4R38_RS23940	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS24025	SM00869	Autotransporter beta-domain
A4R38_RS24035	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS24135	SM00420	helix_turn_helix, Deoxyribose operon repressor
A4R38_RS24135	SM01134	A4R38_RS24135
A4R38_RS24175	SM00354	helix_turn _helix lactose operon repressor
A4R38_RS24250	SM00530	Helix-turn-helix XRE-family like proteins 
A4R38_RS24275	SM00387	Histidine kinase-like ATPases
A4R38_RS24305	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A4R38_RS24320	SM00829	Enoylreductase
A4R38_RS24345	SM00354	helix_turn _helix lactose operon repressor
A4R38_RS24450	SM00831	Cation transporter/ATPase, N-terminus
A4R38_RS24455	SM00354	helix_turn _helix lactose operon repressor
A4R38_RS24465	SM00642	Alpha-amylase domain
A4R38_RS24520	SM00382	ATPases associated with a variety of cellular activities
A4R38_RS24560	SM01091	Transporter associated domain
A4R38_RS24640	SM00882	Coenzyme A transferase
A4R38_RS24660	SM00530	Helix-turn-helix XRE-family like proteins 
