BE965_RS00915	SM00357	Cold shock protein domain
BE965_RS01695	SM00857	Resolvase, N terminal domain
BE965_RS01750	SM00382	ATPases associated with a variety of cellular activities
BE965_RS01760	SM00843	BE965_RS01760
BE965_RS01765	SM00344	helix_turn_helix ASNC type
BE965_RS01780	SM00382	ATPases associated with a variety of cellular activities
BE965_RS01785	SM00382	ATPases associated with a variety of cellular activities
BE965_RS01800	SM00316	Ribosomal protein S1-like RNA-binding domain
BE965_RS01810	SM00382	ATPases associated with a variety of cellular activities
BE965_RS01810	SM01086	C-terminal, D2-small domain, of ClpB protein
BE965_RS01820	SM00357	Cold shock protein domain
BE965_RS01825	SM00382	ATPases associated with a variety of cellular activities
BE965_RS01890	SM00644	BE965_RS01890
BE965_RS01905	SM00382	ATPases associated with a variety of cellular activities
BE965_RS01910	SM00062	Bacterial periplasmic substrate-binding proteins
BE965_RS01910	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BE965_RS01925	SM00062	Bacterial periplasmic substrate-binding proteins
BE965_RS01925	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BE965_RS01950	SM00382	ATPases associated with a variety of cellular activities
BE965_RS02025	SM00014	Acid phosphatase homologues
BE965_RS02030	SM00420	helix_turn_helix, Deoxyribose operon repressor
BE965_RS02030	SM01134	BE965_RS02030
BE965_RS02035	SM00936	Penicillin-binding protein 5, C-terminal domain 
BE965_RS02055	SM00729	Elongator protein 3, MiaB family, Radical SAM
BE965_RS02060	SM00267	diguanylate cyclase
BE965_RS02065	SM00052	Putative diguanylate phosphodiesterase
BE965_RS02085	SM00382	ATPases associated with a variety of cellular activities
BE965_RS02095	SM00852	Probable molybdopterin binding domain
BE965_RS02125	SM00382	ATPases associated with a variety of cellular activities
BE965_RS02140	SM00529	Helix-turn-helix diphteria tox regulatory element
BE965_RS02185	SM00062	Bacterial periplasmic substrate-binding proteins
BE965_RS02185	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BE965_RS02195	SM00382	ATPases associated with a variety of cellular activities
BE965_RS02220	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
BE965_RS02245	SM00487	DEAD-like helicases superfamily
BE965_RS02245	SM00488	BE965_RS02245
BE965_RS02245	SM00491	BE965_RS02245
BE965_RS02255	SM00487	DEAD-like helicases superfamily
BE965_RS02255	SM00490	helicase superfamily c-terminal domain
BE965_RS02270	SM00382	ATPases associated with a variety of cellular activities
BE965_RS02295	SM00155	Phospholipase D. Active site motifs.
BE965_RS02330	SM00852	Probable molybdopterin binding domain
BE965_RS02335	SM00729	Elongator protein 3, MiaB family, Radical SAM
BE965_RS02345	SM00487	DEAD-like helicases superfamily
BE965_RS02345	SM00490	helicase superfamily c-terminal domain
BE965_RS02365	SM00729	Elongator protein 3, MiaB family, Radical SAM
BE965_RS02365	SM00876	Biotin and Thiamin Synthesis associated domain
BE965_RS02415	SM00382	ATPases associated with a variety of cellular activities
BE965_RS02450	SM00382	ATPases associated with a variety of cellular activities
BE965_RS02475	SM00855	Phosphoglycerate mutase family
BE965_RS02605	SM00028	Tetratricopeptide repeats
BE965_RS02610	SM00872	Alpha mannosidase, middle domain
BE965_RS02620	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BE965_RS02620	SM00866	BE965_RS02620
BE965_RS02625	SM00881	CoA binding domain
BE965_RS02640	SM00861	Transketolase, pyrimidine binding domain
BE965_RS02700	SM00858	BE965_RS02700
BE965_RS02705	SM00822	BE965_RS02705
BE965_RS02710	SM00829	Enoylreductase
BE965_RS02720	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BE965_RS02720	SM00895	BE965_RS02720
BE965_RS02730	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
BE965_RS02730	SM01232	BE965_RS02730
BE965_RS02740	SM00797	Allophanate hydrolase subunit 2
BE965_RS02745	SM00796	Allophanate hydrolase subunit 1
BE965_RS02795	SM00387	Histidine kinase-like ATPases
BE965_RS02795	SM00388	His Kinase A (phosphoacceptor) domain
BE965_RS02800	SM00448	cheY-homologous receiver domain
BE965_RS02800	SM00862	Transcriptional regulatory protein, C terminal
BE965_RS02870	SM00420	helix_turn_helix, Deoxyribose operon repressor
BE965_RS02870	SM01134	BE965_RS02870
BE965_RS02890	SM01130	BE965_RS02890
BE965_RS02995	SM00729	Elongator protein 3, MiaB family, Radical SAM
BE965_RS03010	SM00116	Domain in cystathionine beta-synthase and other proteins.
BE965_RS03010	SM01091	Transporter associated domain
BE965_RS03025	SM00062	Bacterial periplasmic substrate-binding proteins
BE965_RS03040	SM00382	ATPases associated with a variety of cellular activities
BE965_RS03065	SM00671	Sel1-like repeats.
BE965_RS03100	SM00855	Phosphoglycerate mutase family
BE965_RS03130	SM00936	Penicillin-binding protein 5, C-terminal domain 
BE965_RS03160	SM00729	Elongator protein 3, MiaB family, Radical SAM
BE965_RS03180	SM00357	Cold shock protein domain
BE965_RS03200	SM00448	cheY-homologous receiver domain
BE965_RS03205	SM00091	PAS domain
BE965_RS03205	SM00387	Histidine kinase-like ATPases
BE965_RS03210	SM00764	Citrate lyase ligase C-terminal domain
BE965_RS03290	SM00470	ParB-like nuclease domain
BE965_RS03320	SM00822	BE965_RS03320
BE965_RS03360	SM00382	ATPases associated with a variety of cellular activities
BE965_RS03375	SM00823	Phosphopantetheine attachment site
BE965_RS03375	SM00824	Thioesterase
BE965_RS03380	SM00923	MbtH-like protein
BE965_RS03400	SM00861	Transketolase, pyrimidine binding domain
BE965_RS03430	SM00382	ATPases associated with a variety of cellular activities
BE965_RS03525	SM00448	cheY-homologous receiver domain
BE965_RS03525	SM00862	Transcriptional regulatory protein, C terminal
BE965_RS03530	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BE965_RS03530	SM00387	Histidine kinase-like ATPases
BE965_RS03530	SM00388	His Kinase A (phosphoacceptor) domain
BE965_RS03540	SM00028	Tetratricopeptide repeats
BE965_RS03595	SM00840	BE965_RS03595
BE965_RS03620	SM01001	AIR carboxylase
BE965_RS03700	SM00346	helix_turn_helix isocitrate lyase regulation
BE965_RS03715	SM00450	Rhodanese Homology Domain
BE965_RS03745	SM00382	ATPases associated with a variety of cellular activities
BE965_RS03755	SM00822	BE965_RS03755
BE965_RS03770	SM00382	ATPases associated with a variety of cellular activities
BE965_RS03775	SM00244	prohibitin homologues
BE965_RS03790	SM00422	helix_turn_helix, mercury resistance
BE965_RS03815	SM00530	Helix-turn-helix XRE-family like proteins 
BE965_RS03890	SM00387	Histidine kinase-like ATPases
BE965_RS03895	SM00493	BE965_RS03895
BE965_RS03905	SM00382	ATPases associated with a variety of cellular activities
BE965_RS03970	SM01266	BE965_RS03970
BE965_RS03980	SM00052	Putative diguanylate phosphodiesterase
BE965_RS04015	SM00938	Nitrogen regulatory protein P-II
BE965_RS04020	SM00382	ATPases associated with a variety of cellular activities
BE965_RS04025	SM00382	ATPases associated with a variety of cellular activities
BE965_RS04030	SM00344	helix_turn_helix ASNC type
BE965_RS04055	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BE965_RS04065	SM00411	bacterial (prokaryotic) histone like domain
BE965_RS04070	SM00382	ATPases associated with a variety of cellular activities
BE965_RS04070	SM00464	Found in ATP-dependent protease La (LON)
BE965_RS04075	SM00382	ATPases associated with a variety of cellular activities
BE965_RS04075	SM00994	ClpX C4-type zinc finger
BE965_RS04075	SM01086	C-terminal, D2-small domain, of ClpB protein
BE965_RS04155	SM00981	BE965_RS04155
BE965_RS04170	SM00861	Transketolase, pyrimidine binding domain
BE965_RS04220	SM00507	HNH nucleases
BE965_RS04235	SM01323	BE965_RS04235
BE965_RS04255	SM00642	Alpha-amylase domain
BE965_RS04270	SM00091	PAS domain
BE965_RS04270	SM00387	Histidine kinase-like ATPases
BE965_RS04270	SM00388	His Kinase A (phosphoacceptor) domain
BE965_RS04275	SM00448	cheY-homologous receiver domain
BE965_RS04275	SM00862	Transcriptional regulatory protein, C terminal
BE965_RS04350	SM00267	diguanylate cyclase
BE965_RS04360	SM00098	Alkaline phosphatase homologues
BE965_RS04410	SM00869	Autotransporter beta-domain
BE965_RS04415	SM01004	Delta-aminolevulinic acid dehydratase
BE965_RS04430	SM00382	ATPases associated with a variety of cellular activities
BE965_RS04435	SM00062	Bacterial periplasmic substrate-binding proteins
BE965_RS04445	SM00829	Enoylreductase
BE965_RS04470	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BE965_RS04495	SM00346	helix_turn_helix isocitrate lyase regulation
BE965_RS04500	SM00354	helix_turn _helix lactose operon repressor
BE965_RS04510	SM01038	Beta galactosidase small chain
BE965_RS04520	SM01266	BE965_RS04520
BE965_RS04555	SM00382	ATPases associated with a variety of cellular activities
BE965_RS04575	SM00829	Enoylreductase
BE965_RS04605	SM00248	ankyrin repeats
BE965_RS04625	SM00052	Putative diguanylate phosphodiesterase
BE965_RS04625	SM00421	helix_turn_helix, Lux Regulon
BE965_RS04675	SM00421	helix_turn_helix, Lux Regulon
BE965_RS04685	SM00869	Autotransporter beta-domain
BE965_RS04720	SM00342	helix_turn_helix, arabinose operon control protein
BE965_RS04745	SM00342	helix_turn_helix, arabinose operon control protein
BE965_RS04745	SM00871	Bacterial transcription activator, effector binding domain
BE965_RS04750	SM00634	Bacterial Ig-like domain (group 1)
BE965_RS04820	SM00421	helix_turn_helix, Lux Regulon
BE965_RS04895	SM00487	DEAD-like helicases superfamily
BE965_RS04940	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
BE965_RS05040	SM00862	Transcriptional regulatory protein, C terminal
BE965_RS05105	SM00858	BE965_RS05105
BE965_RS05155	SM00382	ATPases associated with a variety of cellular activities
BE965_RS05180	SM00382	ATPases associated with a variety of cellular activities
BE965_RS05220	SM01321	BE965_RS05220
BE965_RS05265	SM00479	BE965_RS05265
BE965_RS05280	SM00849	Metallo-beta-lactamase superfamily
BE965_RS05285	SM00257	Lysin motif
BE965_RS05345	SM00382	ATPases associated with a variety of cellular activities
BE965_RS05345	SM00930	BE965_RS05345
BE965_RS05390	SM01322	BE965_RS05390
BE965_RS05405	SM00977	TilS substrate C-terminal domain
BE965_RS05425	SM00481	DNA polymerase alpha chain like domain
BE965_RS05455	SM00935	Outer membrane protein (OmpH-like)
BE965_RS05465	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BE965_RS05515	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BE965_RS05535	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BE965_RS05545	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BE965_RS05590	SM00382	ATPases associated with a variety of cellular activities
BE965_RS05625	SM00487	DEAD-like helicases superfamily
BE965_RS05625	SM00490	helicase superfamily c-terminal domain
BE965_RS05625	SM00847	Helicase associated domain (HA2)  Add an annotation
BE965_RS05745	SM00382	ATPases associated with a variety of cellular activities
BE965_RS05750	SM00947	Carbonic anhydrase
BE965_RS05760	SM00564	beta-propeller repeat
BE965_RS05825	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BE965_RS05825	SM00895	BE965_RS05825
BE965_RS05875	SM00644	BE965_RS05875
BE965_RS05905	SM01240	BE965_RS05905
BE965_RS05930	SM00957	SecA DEAD-like domain
BE965_RS05930	SM00958	SecA preprotein cross-linking domain
BE965_RS05945	SM00864	Tubulin/FtsZ family, GTPase domain
BE965_RS05945	SM00865	Tubulin/FtsZ family, C-terminal domain
BE965_RS05950	SM00842	Cell division protein FtsA
BE965_RS06025	SM00354	helix_turn _helix lactose operon repressor
BE965_RS06055	SM00917	LeuA allosteric (dimerisation) domain
BE965_RS06060	SM01329	BE965_RS06060
BE965_RS06095	SM00382	ATPases associated with a variety of cellular activities
BE965_RS06120	SM01130	BE965_RS06120
BE965_RS06125	SM00420	helix_turn_helix, Deoxyribose operon repressor
BE965_RS06130	SM00342	helix_turn_helix, arabinose operon control protein
BE965_RS06150	SM01007	Class II Aldolase and Adducin N-terminal domain
BE965_RS06155	SM00486	DNA polymerase type-B family
BE965_RS06160	SM00487	DEAD-like helicases superfamily
BE965_RS06160	SM00490	helicase superfamily c-terminal domain
BE965_RS06170	SM00271	DnaJ molecular chaperone homology domain
BE965_RS06190	SM00650	Ribosomal RNA adenine dimethylases
BE965_RS06245	SM00893	Electron transfer flavoprotein domain
BE965_RS06250	SM00893	Electron transfer flavoprotein domain
BE965_RS06295	SM00851	MGS-like domain
BE965_RS06295	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
BE965_RS06300	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
BE965_RS06345	SM00904	Riboflavin kinase
BE965_RS06405	SM00271	DnaJ molecular chaperone homology domain
BE965_RS06430	SM00852	Probable molybdopterin binding domain
BE965_RS06485	SM00448	cheY-homologous receiver domain
BE965_RS06485	SM00862	Transcriptional regulatory protein, C terminal
BE965_RS06495	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BE965_RS06495	SM00387	Histidine kinase-like ATPases
BE965_RS06495	SM00388	His Kinase A (phosphoacceptor) domain
BE965_RS06500	SM00448	cheY-homologous receiver domain
BE965_RS06500	SM00862	Transcriptional regulatory protein, C terminal
BE965_RS06515	SM00855	Phosphoglycerate mutase family
BE965_RS06535	SM00382	ATPases associated with a variety of cellular activities
BE965_RS06540	SM00530	Helix-turn-helix XRE-family like proteins 
BE965_RS06545	SM00382	ATPases associated with a variety of cellular activities
BE965_RS06580	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
BE965_RS06585	SM01133	BE965_RS06585
BE965_RS06615	SM00749	bacterial OsmY and nodulation domain
BE965_RS06670	SM00421	helix_turn_helix, Lux Regulon
BE965_RS06675	SM00421	helix_turn_helix, Lux Regulon
BE965_RS06695	SM00382	ATPases associated with a variety of cellular activities
BE965_RS06710	SM00829	Enoylreductase
BE965_RS06715	SM00895	BE965_RS06715
BE965_RS06725	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BE965_RS06725	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BE965_RS06725	SM00319	Homologues of the ligand binding domain of Tar
BE965_RS06745	SM00833	Cobalamin synthesis protein cobW C-terminal domain
BE965_RS06775	SM00487	DEAD-like helicases superfamily
BE965_RS06790	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BE965_RS06880	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BE965_RS06880	SM00895	BE965_RS06880
BE965_RS07005	SM00155	Phospholipase D. Active site motifs.
BE965_RS07075	SM00420	helix_turn_helix, Deoxyribose operon repressor
BE965_RS07075	SM01134	BE965_RS07075
BE965_RS07080	SM00346	helix_turn_helix isocitrate lyase regulation
BE965_RS07085	SM01130	BE965_RS07085
BE965_RS07115	SM01007	Class II Aldolase and Adducin N-terminal domain
BE965_RS07140	SM00382	ATPases associated with a variety of cellular activities
BE965_RS07235	SM00869	Autotransporter beta-domain
BE965_RS07240	SM00382	ATPases associated with a variety of cellular activities
BE965_RS07370	SM00965	Secretin and TonB N terminus short domain
BE965_RS07390	SM00382	ATPases associated with a variety of cellular activities
BE965_RS07460	SM00420	helix_turn_helix, Deoxyribose operon repressor
BE965_RS07460	SM01134	BE965_RS07460
BE965_RS07520	SM00858	BE965_RS07520
BE965_RS07525	SM01130	BE965_RS07525
BE965_RS07530	SM00346	helix_turn_helix isocitrate lyase regulation
BE965_RS07580	SM00829	Enoylreductase
BE965_RS07655	SM00822	BE965_RS07655
BE965_RS07690	SM00831	Cation transporter/ATPase, N-terminus
BE965_RS07695	SM00354	helix_turn _helix lactose operon repressor
BE965_RS07705	SM00642	Alpha-amylase domain
BE965_RS07755	SM00382	ATPases associated with a variety of cellular activities
BE965_RS07775	SM00966	SpoVT / AbrB like domain 
BE965_RS07805	SM01091	Transporter associated domain
BE965_RS07890	SM00882	Coenzyme A transferase
BE965_RS07915	SM00530	Helix-turn-helix XRE-family like proteins 
BE965_RS07950	SM01007	Class II Aldolase and Adducin N-terminal domain
BE965_RS07960	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
BE965_RS07985	SM00420	helix_turn_helix, Deoxyribose operon repressor
BE965_RS07985	SM01134	BE965_RS07985
BE965_RS08045	SM00967	RNA 2'-O ribose methyltransferase substrate binding
BE965_RS08050	SM00316	Ribosomal protein S1-like RNA-binding domain
BE965_RS08050	SM00357	Cold shock protein domain
BE965_RS08050	SM00955	BE965_RS08050
BE965_RS08060	SM00788	Adenylosuccinate synthetase
BE965_RS08070	SM00244	prohibitin homologues
BE965_RS08075	SM00244	prohibitin homologues
BE965_RS08095	SM00853	MutL C terminal dimerisation domain
BE965_RS08095	SM01340	BE965_RS08095
BE965_RS08100	SM00646	BE965_RS08100
BE965_RS08135	SM00479	BE965_RS08135
BE965_RS08215	SM00841	Elongation factor P, C-terminal
BE965_RS08215	SM01185	BE965_RS08215
BE965_RS08240	SM00883	Chaperonin 10 Kd subunit
BE965_RS08315	SM00487	DEAD-like helicases superfamily
BE965_RS08315	SM00490	helicase superfamily c-terminal domain
BE965_RS08335	SM00470	ParB-like nuclease domain
BE965_RS08425	SM00877	BE965_RS08425
BE965_RS08430	SM00877	BE965_RS08430
BE965_RS08440	SM00877	BE965_RS08440
BE965_RS08490	SM00342	helix_turn_helix, arabinose operon control protein
BE965_RS08490	SM00448	cheY-homologous receiver domain
BE965_RS08500	SM00877	BE965_RS08500
BE965_RS08675	SM00862	Transcriptional regulatory protein, C terminal
BE965_RS08720	SM00869	Autotransporter beta-domain
BE965_RS08730	SM00342	helix_turn_helix, arabinose operon control protein
BE965_RS08735	SM00869	Autotransporter beta-domain
BE965_RS08765	SM00091	PAS domain
BE965_RS08765	SM00387	Histidine kinase-like ATPases
BE965_RS08770	SM00448	cheY-homologous receiver domain
BE965_RS08805	SM00342	helix_turn_helix, arabinose operon control protein
BE965_RS08815	SM00342	helix_turn_helix, arabinose operon control protein
BE965_RS08830	SM00448	cheY-homologous receiver domain
BE965_RS08830	SM00862	Transcriptional regulatory protein, C terminal
BE965_RS08835	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BE965_RS08835	SM00387	Histidine kinase-like ATPases
BE965_RS08835	SM00388	His Kinase A (phosphoacceptor) domain
BE965_RS08875	SM00382	ATPases associated with a variety of cellular activities
BE965_RS08890	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BE965_RS08890	SM00866	BE965_RS08890
BE965_RS08915	SM00382	ATPases associated with a variety of cellular activities
BE965_RS08920	SM00382	ATPases associated with a variety of cellular activities
BE965_RS08930	SM00072	Guanylate kinase homologues.
BE965_RS08970	SM00382	ATPases associated with a variety of cellular activities
BE965_RS08990	SM00849	Metallo-beta-lactamase superfamily
BE965_RS09035	SM00382	ATPases associated with a variety of cellular activities
BE965_RS09040	SM00382	ATPases associated with a variety of cellular activities
BE965_RS09045	SM00671	Sel1-like repeats.
BE965_RS09060	SM00028	Tetratricopeptide repeats
BE965_RS09160	SM00422	helix_turn_helix, mercury resistance
BE965_RS09165	SM00342	helix_turn_helix, arabinose operon control protein
BE965_RS09170	SM00052	Putative diguanylate phosphodiesterase
BE965_RS09210	SM00387	Histidine kinase-like ATPases
BE965_RS09215	SM00382	ATPases associated with a variety of cellular activities
BE965_RS09215	SM00448	cheY-homologous receiver domain
BE965_RS09230	SM00881	CoA binding domain
BE965_RS09250	SM00861	Transketolase, pyrimidine binding domain
BE965_RS09270	SM01005	Alanine racemase, C-terminal domain
BE965_RS09275	SM00382	ATPases associated with a variety of cellular activities
BE965_RS09280	SM00354	helix_turn _helix lactose operon repressor
BE965_RS09285	SM00882	Coenzyme A transferase
BE965_RS09305	SM00829	Enoylreductase
BE965_RS09345	SM00563	Phosphate acyltransferases
BE965_RS09375	SM00382	ATPases associated with a variety of cellular activities
BE965_RS09455	SM00363	S4 RNA-binding domain
BE965_RS09465	SM00822	BE965_RS09465
BE965_RS09520	SM01018	B12 binding domain
BE965_RS09525	SM00346	helix_turn_helix isocitrate lyase regulation
BE965_RS09585	SM00798	AICARFT/IMPCHase bienzyme
BE965_RS09585	SM00851	MGS-like domain
BE965_RS09590	SM01209	BE965_RS09590
BE965_RS09590	SM01210	BE965_RS09590
BE965_RS09595	SM00382	ATPases associated with a variety of cellular activities
BE965_RS09595	SM00448	cheY-homologous receiver domain
BE965_RS09600	SM00387	Histidine kinase-like ATPases
BE965_RS09600	SM00388	His Kinase A (phosphoacceptor) domain
BE965_RS09620	SM00411	bacterial (prokaryotic) histone like domain
BE965_RS09675	SM00876	Biotin and Thiamin Synthesis associated domain
BE965_RS09680	SM00663	RNA polymerase I subunit A N-terminus
BE965_RS09710	SM00649	Ribosomal protein L11/L12
BE965_RS09715	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
BE965_RS09715	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
BE965_RS09860	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BE965_RS09880	SM00342	helix_turn_helix, arabinose operon control protein
BE965_RS09980	SM00487	DEAD-like helicases superfamily
BE965_RS09980	SM00490	helicase superfamily c-terminal domain
BE965_RS09985	SM00354	helix_turn _helix lactose operon repressor
BE965_RS10000	SM00382	ATPases associated with a variety of cellular activities
BE965_RS10000	SM01086	C-terminal, D2-small domain, of ClpB protein
BE965_RS10095	SM00448	cheY-homologous receiver domain
BE965_RS10095	SM00862	Transcriptional regulatory protein, C terminal
BE965_RS10100	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BE965_RS10100	SM00387	Histidine kinase-like ATPases
BE965_RS10100	SM00388	His Kinase A (phosphoacceptor) domain
BE965_RS10130	SM00342	helix_turn_helix, arabinose operon control protein
BE965_RS10135	SM00342	helix_turn_helix, arabinose operon control protein
BE965_RS10150	SM01007	Class II Aldolase and Adducin N-terminal domain
BE965_RS10180	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BE965_RS10240	SM00530	Helix-turn-helix XRE-family like proteins 
BE965_RS10290	SM00829	Enoylreductase
BE965_RS10295	SM01133	BE965_RS10295
BE965_RS10310	SM00420	helix_turn_helix, Deoxyribose operon repressor
BE965_RS10310	SM01134	BE965_RS10310
BE965_RS10325	SM01230	BE965_RS10325
BE965_RS10330	SM00091	PAS domain
BE965_RS10330	SM00387	Histidine kinase-like ATPases
BE965_RS10330	SM00388	His Kinase A (phosphoacceptor) domain
BE965_RS10335	SM00382	ATPases associated with a variety of cellular activities
BE965_RS10335	SM00448	cheY-homologous receiver domain
BE965_RS10345	SM00729	Elongator protein 3, MiaB family, Radical SAM
BE965_RS10360	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
BE965_RS10360	SM00474	3'-5' exonuclease
BE965_RS10360	SM00475	5'-3' exonuclease
BE965_RS10360	SM00482	DNA polymerase A domain
BE965_RS10370	SM00563	Phosphate acyltransferases
BE965_RS10465	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
BE965_RS10510	SM00346	helix_turn_helix isocitrate lyase regulation
BE965_RS10595	SM00861	Transketolase, pyrimidine binding domain
BE965_RS10650	SM00341	Helicase and RNase D C-terminal
BE965_RS10650	SM00487	DEAD-like helicases superfamily
BE965_RS10650	SM00490	helicase superfamily c-terminal domain
BE965_RS10650	SM00956	BE965_RS10650
BE965_RS10730	SM01219	BE965_RS10730
BE965_RS10840	SM00984	UDP binding domain
BE965_RS10860	SM00357	Cold shock protein domain
BE965_RS10860	SM00382	ATPases associated with a variety of cellular activities
BE965_RS10860	SM00959	Rho termination factor, N-terminal domain
BE965_RS10875	SM00487	DEAD-like helicases superfamily
BE965_RS10875	SM00490	helicase superfamily c-terminal domain
BE965_RS10940	SM00382	ATPases associated with a variety of cellular activities
BE965_RS10985	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BE965_RS10985	SM00895	BE965_RS10985
BE965_RS10995	SM00354	helix_turn _helix lactose operon repressor
BE965_RS11015	SM00382	ATPases associated with a variety of cellular activities
BE965_RS11030	SM00382	ATPases associated with a variety of cellular activities
BE965_RS11035	SM00327	von Willebrand factor (vWF) type A domain
BE965_RS11045	SM00344	helix_turn_helix ASNC type
BE965_RS11055	SM01228	BE965_RS11055
BE965_RS11100	SM00382	ATPases associated with a variety of cellular activities
BE965_RS11135	SM00382	ATPases associated with a variety of cellular activities
BE965_RS11145	SM01061	CAT RNA binding domain
BE965_RS11245	SM01234	BE965_RS11245
BE965_RS11265	SM00382	ATPases associated with a variety of cellular activities
BE965_RS11265	SM00760	Bacterial dnaA protein helix-turn-helix domain
BE965_RS11270	SM00480	DNA polymerase III beta subunit
BE965_RS11280	SM00387	Histidine kinase-like ATPases
BE965_RS11280	SM00433	TopoisomeraseII
BE965_RS11300	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BE965_RS11300	SM00895	BE965_RS11300
BE965_RS11315	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BE965_RS11355	SM00342	helix_turn_helix, arabinose operon control protein
BE965_RS11415	SM00421	helix_turn_helix, Lux Regulon
BE965_RS11415	SM00448	cheY-homologous receiver domain
BE965_RS11420	SM00387	Histidine kinase-like ATPases
BE965_RS11450	SM00530	Helix-turn-helix XRE-family like proteins 
BE965_RS11565	SM00487	DEAD-like helicases superfamily
BE965_RS11565	SM00490	helicase superfamily c-terminal domain
BE965_RS11575	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BE965_RS11575	SM00954	Region found in RelA / SpoT proteins
BE965_RS11580	SM01409	BE965_RS11580
BE965_RS11585	SM00072	Guanylate kinase homologues.
BE965_RS11590	SM00532	Ligase N family
BE965_RS11650	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
BE965_RS11650	SM01232	BE965_RS11650
BE965_RS11740	SM00829	Enoylreductase
BE965_RS11765	SM00450	Rhodanese Homology Domain
BE965_RS11785	SM00971	Serine acetyltransferase, N-terminal
BE965_RS11800	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BE965_RS11800	SM00895	BE965_RS11800
BE965_RS11900	SM00342	helix_turn_helix, arabinose operon control protein
BE965_RS11905	SM01007	Class II Aldolase and Adducin N-terminal domain
BE965_RS11915	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
BE965_RS11955	SM00346	helix_turn_helix isocitrate lyase regulation
BE965_RS11970	SM00642	Alpha-amylase domain
BE965_RS11975	SM00047	Lysozyme subfamily 2
BE965_RS11980	SM00342	helix_turn_helix, arabinose operon control protein
BE965_RS11990	SM00382	ATPases associated with a variety of cellular activities
BE965_RS12045	SM00357	Cold shock protein domain
BE965_RS12050	SM00530	Helix-turn-helix XRE-family like proteins 
BE965_RS12130	SM00382	ATPases associated with a variety of cellular activities
BE965_RS12135	SM00382	ATPases associated with a variety of cellular activities
BE965_RS12220	SM00028	Tetratricopeptide repeats
BE965_RS12225	SM00052	Putative diguanylate phosphodiesterase
BE965_RS12225	SM00267	diguanylate cyclase
BE965_RS12260	SM00052	Putative diguanylate phosphodiesterase
BE965_RS12285	SM00421	helix_turn_helix, Lux Regulon
BE965_RS12295	SM01235	BE965_RS12295
BE965_RS12305	SM00342	helix_turn_helix, arabinose operon control protein
BE965_RS12310	SM00342	helix_turn_helix, arabinose operon control protein
BE965_RS12360	SM00382	ATPases associated with a variety of cellular activities
BE965_RS12380	SM00729	Elongator protein 3, MiaB family, Radical SAM
BE965_RS12405	SM00421	helix_turn_helix, Lux Regulon
BE965_RS12505	SM00382	ATPases associated with a variety of cellular activities
BE965_RS12545	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BE965_RS12545	SM00866	BE965_RS12545
BE965_RS12555	SM00382	ATPases associated with a variety of cellular activities
BE965_RS12560	SM00382	ATPases associated with a variety of cellular activities
BE965_RS12635	SM00382	ATPases associated with a variety of cellular activities
BE965_RS12635	SM00962	SRP54-type protein, GTPase domain
BE965_RS12635	SM00963	SRP54-type protein, helical bundle domain
BE965_RS12640	SM00382	ATPases associated with a variety of cellular activities
BE965_RS12690	SM00382	ATPases associated with a variety of cellular activities
BE965_RS12695	SM00382	ATPases associated with a variety of cellular activities
BE965_RS12715	SM00382	ATPases associated with a variety of cellular activities
BE965_RS12755	SM00354	helix_turn _helix lactose operon repressor
BE965_RS12770	SM00487	DEAD-like helicases superfamily
BE965_RS12770	SM00490	helicase superfamily c-terminal domain
BE965_RS12785	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BE965_RS12790	SM00642	Alpha-amylase domain
BE965_RS12795	SM00642	Alpha-amylase domain
BE965_RS12835	SM00450	Rhodanese Homology Domain
BE965_RS12845	SM00420	helix_turn_helix, Deoxyribose operon repressor
BE965_RS12845	SM01134	BE965_RS12845
BE965_RS12860	SM00421	helix_turn_helix, Lux Regulon
BE965_RS12915	SM00899	BE965_RS12915
BE965_RS12925	SM00316	Ribosomal protein S1-like RNA-binding domain
BE965_RS12925	SM00732	Likely ribonuclease with RNase H fold.
BE965_RS12940	SM00448	cheY-homologous receiver domain
BE965_RS12940	SM00862	Transcriptional regulatory protein, C terminal
BE965_RS12945	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BE965_RS12945	SM00387	Histidine kinase-like ATPases
BE965_RS12945	SM00388	His Kinase A (phosphoacceptor) domain
BE965_RS12980	SM00363	S4 RNA-binding domain
BE965_RS13025	SM00965	Secretin and TonB N terminus short domain
BE965_RS13165	SM00100	Cyclic nucleotide-monophosphate binding domain
BE965_RS13165	SM00419	helix_turn_helix, cAMP Regulatory protein
BE965_RS13195	SM00382	ATPases associated with a variety of cellular activities
BE965_RS13265	SM00838	Elongation factor G C-terminus
BE965_RS13265	SM00889	Elongation factor G, domain IV
BE965_RS13280	SM00495	Chitin-binding domain type 3
BE965_RS13340	SM00382	ATPases associated with a variety of cellular activities
BE965_RS13365	SM01403	BE965_RS13365
BE965_RS13385	SM01382	BE965_RS13385
BE965_RS13385	SM01383	BE965_RS13385
BE965_RS13400	SM00322	K homology RNA-binding domain
BE965_RS13420	SM01374	BE965_RS13420
BE965_RS13425	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
BE965_RS13490	SM00363	S4 RNA-binding domain
BE965_RS13490	SM01390	BE965_RS13490
BE965_RS13495	SM00662	RNA polymerases D
BE965_RS13510	SM00422	helix_turn_helix, mercury resistance
BE965_RS13615	SM00382	ATPases associated with a variety of cellular activities
BE965_RS13630	SM00062	Bacterial periplasmic substrate-binding proteins
BE965_RS13710	SM00420	helix_turn_helix, Deoxyribose operon repressor
BE965_RS13710	SM01134	BE965_RS13710
BE965_RS13725	SM00382	ATPases associated with a variety of cellular activities
BE965_RS13745	SM00878	Biotin carboxylase C-terminal domain
BE965_RS13760	SM00829	Enoylreductase
BE965_RS13765	SM00052	Putative diguanylate phosphodiesterase
BE965_RS13765	SM00267	diguanylate cyclase
BE965_RS13800	SM00316	Ribosomal protein S1-like RNA-binding domain
BE965_RS13855	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BE965_RS13860	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BE965_RS13905	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BE965_RS13905	SM00895	BE965_RS13905
BE965_RS13910	SM01130	BE965_RS13910
BE965_RS13955	SM00729	Elongator protein 3, MiaB family, Radical SAM
BE965_RS13960	SM00073	Histidine Phosphotransfer domain
BE965_RS13960	SM00091	PAS domain
BE965_RS13960	SM00387	Histidine kinase-like ATPases
BE965_RS13960	SM00388	His Kinase A (phosphoacceptor) domain
BE965_RS13960	SM00448	cheY-homologous receiver domain
BE965_RS14005	SM00382	ATPases associated with a variety of cellular activities
BE965_RS14035	SM00382	ATPases associated with a variety of cellular activities
BE965_RS14110	SM01103	BE965_RS14110
BE965_RS14120	SM00382	ATPases associated with a variety of cellular activities
BE965_RS14170	SM00316	Ribosomal protein S1-like RNA-binding domain
BE965_RS14190	SM01387	BE965_RS14190
BE965_RS14195	SM00316	Ribosomal protein S1-like RNA-binding domain
BE965_RS14195	SM00322	K homology RNA-binding domain
BE965_RS14200	SM00028	Tetratricopeptide repeats
BE965_RS14210	SM00487	DEAD-like helicases superfamily
BE965_RS14210	SM00490	helicase superfamily c-terminal domain
BE965_RS14245	SM00465	GIY-YIG type nucleases (URI domain)
BE965_RS14260	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BE965_RS14270	SM00749	bacterial OsmY and nodulation domain
BE965_RS14360	SM00420	helix_turn_helix, Deoxyribose operon repressor
BE965_RS14360	SM01134	BE965_RS14360
BE965_RS14375	SM00858	BE965_RS14375
BE965_RS14525	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BE965_RS14525	SM00895	BE965_RS14525
BE965_RS14540	SM00858	BE965_RS14540
BE965_RS14590	SM00530	Helix-turn-helix XRE-family like proteins 
BE965_RS14620	SM01038	Beta galactosidase small chain
BE965_RS14625	SM00354	helix_turn _helix lactose operon repressor
BE965_RS14650	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BE965_RS14650	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BE965_RS14690	SM00400	zinc finger
BE965_RS14690	SM00493	BE965_RS14690
BE965_RS14690	SM00766	DNA primase DnaG DnaB-binding
BE965_RS14735	SM01207	BE965_RS14735
BE965_RS14740	SM00905	Dihydroneopterin aldolase
BE965_RS14755	SM00287	Bacterial SH3 domain homologues
BE965_RS14765	SM01118	BE965_RS14765
BE965_RS14780	SM00244	prohibitin homologues
BE965_RS14895	SM00387	Histidine kinase-like ATPases
BE965_RS14895	SM00433	TopoisomeraseII
BE965_RS14905	SM00382	ATPases associated with a variety of cellular activities
BE965_RS14955	SM00387	Histidine kinase-like ATPases
BE965_RS14955	SM00388	His Kinase A (phosphoacceptor) domain
BE965_RS14960	SM00448	cheY-homologous receiver domain
BE965_RS14960	SM00862	Transcriptional regulatory protein, C terminal
BE965_RS14970	SM00871	Bacterial transcription activator, effector binding domain
BE965_RS14980	SM00434	DNA Topoisomerase IV
BE965_RS14985	SM00563	Phosphate acyltransferases
BE965_RS15025	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BE965_RS15025	SM00895	BE965_RS15025
BE965_RS15030	SM00729	Elongator protein 3, MiaB family, Radical SAM
BE965_RS15055	SM00342	helix_turn_helix, arabinose operon control protein
BE965_RS15235	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BE965_RS15235	SM00895	BE965_RS15235
BE965_RS15275	SM01276	BE965_RS15275
BE965_RS15305	SM00382	ATPases associated with a variety of cellular activities
BE965_RS15355	SM00382	ATPases associated with a variety of cellular activities
BE965_RS15380	SM00984	UDP binding domain
BE965_RS15505	SM00869	Autotransporter beta-domain
BE965_RS15600	SM01130	BE965_RS15600
BE965_RS15635	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BE965_RS15635	SM00895	BE965_RS15635
BE965_RS15730	SM00869	Autotransporter beta-domain
BE965_RS15755	SM01006	Siderophore biosynthesis protein domain
BE965_RS15840	SM00347	helix_turn_helix multiple antibiotic resistance protein
BE965_RS15865	SM00028	Tetratricopeptide repeats
BE965_RS15910	SM00478	endonuclease III
BE965_RS15910	SM00525	BE965_RS15910
BE965_RS15935	SM00870	BE965_RS15935
BE965_RS15960	SM00729	Elongator protein 3, MiaB family, Radical SAM
BE965_RS15970	SM01152	BE965_RS15970
BE965_RS15985	SM00382	ATPases associated with a variety of cellular activities
BE965_RS15990	SM00732	Likely ribonuclease with RNase H fold.
BE965_RS16015	SM00731	SprT homologues.
BE965_RS16070	SM00861	Transketolase, pyrimidine binding domain
BE965_RS16075	SM00244	prohibitin homologues
BE965_RS16115	SM00382	ATPases associated with a variety of cellular activities
BE965_RS16120	SM00382	ATPases associated with a variety of cellular activities
BE965_RS16145	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BE965_RS16245	SM01011	Aminopeptidase P, N-terminal domain
BE965_RS16280	SM01022	BE965_RS16280
BE965_RS16380	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
BE965_RS16385	SM01092	CO dehydrogenase flavoprotein C-terminal domain
BE965_RS16440	SM00091	PAS domain
BE965_RS16440	SM00382	ATPases associated with a variety of cellular activities
BE965_RS16450	SM01092	CO dehydrogenase flavoprotein C-terminal domain
BE965_RS16455	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
BE965_RS16465	SM00257	Lysin motif
BE965_RS16515	SM00354	helix_turn _helix lactose operon repressor
BE965_RS16520	SM00563	Phosphate acyltransferases
BE965_RS16545	SM00927	DNA mismatch repair enzyme MutH
BE965_RS16555	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BE965_RS16615	SM00646	BE965_RS16615
BE965_RS16620	SM01061	CAT RNA binding domain
BE965_RS16695	SM00382	ATPases associated with a variety of cellular activities
BE965_RS16770	SM00382	ATPases associated with a variety of cellular activities
BE965_RS16770	SM01086	C-terminal, D2-small domain, of ClpB protein
BE965_RS16820	SM00925	MltA specific insert domain
BE965_RS16860	SM00420	helix_turn_helix, Deoxyribose operon repressor
BE965_RS16860	SM01134	BE965_RS16860
BE965_RS16885	SM01007	Class II Aldolase and Adducin N-terminal domain
BE965_RS16895	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
BE965_RS16895	SM00475	5'-3' exonuclease
BE965_RS16945	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BE965_RS16950	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BE965_RS16955	SM00073	Histidine Phosphotransfer domain
BE965_RS16955	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BE965_RS16955	SM00387	Histidine kinase-like ATPases
BE965_RS16955	SM00388	His Kinase A (phosphoacceptor) domain
BE965_RS16955	SM00448	cheY-homologous receiver domain
BE965_RS16965	SM00954	Region found in RelA / SpoT proteins
BE965_RS16980	SM01192	BE965_RS16980
BE965_RS16980	SM01193	BE965_RS16980
BE965_RS17000	SM00354	helix_turn _helix lactose operon repressor
BE965_RS17005	SM00640	Glycosyl hydrolases family 32
BE965_RS17050	SM00893	Electron transfer flavoprotein domain
BE965_RS17155	SM00257	Lysin motif
BE965_RS17170	SM00849	Metallo-beta-lactamase superfamily
BE965_RS17185	SM01007	Class II Aldolase and Adducin N-terminal domain
BE965_RS17200	SM00420	helix_turn_helix, Deoxyribose operon repressor
BE965_RS17200	SM01134	BE965_RS17200
BE965_RS17210	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
BE965_RS17210	SM00534	ATPase domain of DNA mismatch repair MUTS family
BE965_RS17225	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BE965_RS17225	SM00382	ATPases associated with a variety of cellular activities
BE965_RS17305	SM00530	Helix-turn-helix XRE-family like proteins 
BE965_RS17335	SM00849	Metallo-beta-lactamase superfamily
BE965_RS17340	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BE965_RS17340	SM00382	ATPases associated with a variety of cellular activities
BE965_RS17350	SM00420	helix_turn_helix, Deoxyribose operon repressor
BE965_RS17350	SM01134	BE965_RS17350
BE965_RS17395	SM00382	ATPases associated with a variety of cellular activities
BE965_RS17405	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BE965_RS17480	SM00347	helix_turn_helix multiple antibiotic resistance protein
BE965_RS17510	SM00382	ATPases associated with a variety of cellular activities
BE965_RS17555	SM00528	Domain in histone-like proteins of HNS family
BE965_RS17560	SM00450	Rhodanese Homology Domain
BE965_RS17565	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BE965_RS17575	SM00257	Lysin motif
BE965_RS17575	SM00749	bacterial OsmY and nodulation domain
BE965_RS17580	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BE965_RS17580	SM00895	BE965_RS17580
BE965_RS17660	SM01091	Transporter associated domain
BE965_RS17670	SM00382	ATPases associated with a variety of cellular activities
BE965_RS17670	SM00962	SRP54-type protein, GTPase domain
BE965_RS17670	SM00963	SRP54-type protein, helical bundle domain
BE965_RS17700	SM00267	diguanylate cyclase
BE965_RS17720	SM00830	Chorismate mutase type II
BE965_RS17725	SM00830	Chorismate mutase type II
BE965_RS17745	SM00363	S4 RNA-binding domain
BE965_RS17755	SM00382	ATPases associated with a variety of cellular activities
BE965_RS17755	SM01086	C-terminal, D2-small domain, of ClpB protein
BE965_RS17795	SM00155	Phospholipase D. Active site motifs.
BE965_RS17800	SM00881	CoA binding domain
BE965_RS17805	SM01144	BE965_RS17805
BE965_RS17820	SM00967	RNA 2'-O ribose methyltransferase substrate binding
BE965_RS17825	SM00986	Uracil DNA glycosylase superfamily
BE965_RS17825	SM00987	UreE urease accessory protein, C-terminal domain 
BE965_RS17845	SM00487	DEAD-like helicases superfamily
BE965_RS17845	SM00490	helicase superfamily c-terminal domain
BE965_RS17895	SM00358	Double-stranded RNA binding motif
BE965_RS17895	SM00535	Ribonuclease III family
BE965_RS17950	SM00062	Bacterial periplasmic substrate-binding proteins
BE965_RS17960	SM01211	BE965_RS17960
BE965_RS17965	SM00387	Histidine kinase-like ATPases
BE965_RS17965	SM00388	His Kinase A (phosphoacceptor) domain
BE965_RS17975	SM00382	ATPases associated with a variety of cellular activities
BE965_RS17975	SM00448	cheY-homologous receiver domain
BE965_RS17980	SM00938	Nitrogen regulatory protein P-II
BE965_RS18000	SM00028	Tetratricopeptide repeats
BE965_RS18010	SM00382	ATPases associated with a variety of cellular activities
BE965_RS18020	SM00829	Enoylreductase
BE965_RS18080	SM00271	DnaJ molecular chaperone homology domain
BE965_RS18110	SM00450	Rhodanese Homology Domain
BE965_RS18115	SM01359	BE965_RS18115
BE965_RS18115	SM01360	BE965_RS18115
BE965_RS18125	SM00562	BE965_RS18125
BE965_RS18135	SM00530	Helix-turn-helix XRE-family like proteins 
BE965_RS18155	SM00564	beta-propeller repeat
BE965_RS18190	SM00116	Domain in cystathionine beta-synthase and other proteins.
BE965_RS18190	SM01240	BE965_RS18190
BE965_RS18240	SM00530	Helix-turn-helix XRE-family like proteins 
BE965_RS18485	SM00052	Putative diguanylate phosphodiesterase
BE965_RS18485	SM00267	diguanylate cyclase
BE965_RS18555	SM01130	BE965_RS18555
BE965_RS18610	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BE965_RS18610	SM00387	Histidine kinase-like ATPases
BE965_RS18635	SM00861	Transketolase, pyrimidine binding domain
BE965_RS18650	SM00919	Malic enzyme, NAD binding domain
BE965_RS18650	SM01274	BE965_RS18650
BE965_RS18660	SM00877	BE965_RS18660
BE965_RS18685	SM00877	BE965_RS18685
BE965_RS18730	SM00877	BE965_RS18730
BE965_RS18735	SM00877	BE965_RS18735
BE965_RS18740	SM00342	helix_turn_helix, arabinose operon control protein
BE965_RS18750	SM00646	BE965_RS18750
BE965_RS18785	SM00822	BE965_RS18785
BE965_RS18805	SM00382	ATPases associated with a variety of cellular activities
BE965_RS18850	SM00771	ZipA, C-terminal domain (FtsZ-binding)
BE965_RS18855	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BE965_RS18855	SM00292	breast cancer carboxy-terminal domain
BE965_RS18855	SM00532	Ligase N family
BE965_RS18940	SM00052	Putative diguanylate phosphodiesterase
BE965_RS18940	SM00267	diguanylate cyclase
BE965_RS18995	SM00342	helix_turn_helix, arabinose operon control protein
BE965_RS19000	SM00448	cheY-homologous receiver domain
BE965_RS19000	SM00850	LytTr DNA-binding domain
BE965_RS19005	SM00387	Histidine kinase-like ATPases
BE965_RS19065	SM00062	Bacterial periplasmic substrate-binding proteins
BE965_RS19065	SM00073	Histidine Phosphotransfer domain
BE965_RS19065	SM00387	Histidine kinase-like ATPases
BE965_RS19065	SM00388	His Kinase A (phosphoacceptor) domain
BE965_RS19065	SM00448	cheY-homologous receiver domain
BE965_RS19070	SM00421	helix_turn_helix, Lux Regulon
BE965_RS19070	SM00448	cheY-homologous receiver domain
BE965_RS19130	SM00778	Zinc-binding domain of primase-helicase
BE965_RS19240	SM00463	Small MutS-related domain
BE965_RS19280	SM00825	Beta-ketoacyl synthase
BE965_RS19305	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BE965_RS19350	SM00062	Bacterial periplasmic substrate-binding proteins
BE965_RS19355	SM00062	Bacterial periplasmic substrate-binding proteins
BE965_RS19370	SM00382	ATPases associated with a variety of cellular activities
BE965_RS19380	SM00905	Dihydroneopterin aldolase
BE965_RS19440	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BE965_RS19480	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
BE965_RS19485	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BE965_RS19485	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
BE965_RS19535	SM00327	von Willebrand factor (vWF) type A domain
BE965_RS19540	SM00849	Metallo-beta-lactamase superfamily
BE965_RS19575	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BE965_RS19640	SM00852	Probable molybdopterin binding domain
BE965_RS19645	SM00346	helix_turn_helix isocitrate lyase regulation
BE965_RS19650	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BE965_RS19720	SM00869	Autotransporter beta-domain
BE965_RS19730	SM00434	DNA Topoisomerase IV
BE965_RS19745	SM01359	BE965_RS19745
BE965_RS19745	SM01360	BE965_RS19745
BE965_RS19770	SM00882	Coenzyme A transferase
BE965_RS19775	SM00882	Coenzyme A transferase
BE965_RS19780	SM00382	ATPases associated with a variety of cellular activities
BE965_RS19780	SM00448	cheY-homologous receiver domain
BE965_RS19785	SM00091	PAS domain
BE965_RS19785	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BE965_RS19785	SM00387	Histidine kinase-like ATPases
BE965_RS19785	SM00388	His Kinase A (phosphoacceptor) domain
BE965_RS19790	SM00387	Histidine kinase-like ATPases
BE965_RS19790	SM00388	His Kinase A (phosphoacceptor) domain
BE965_RS19790	SM00448	cheY-homologous receiver domain
BE965_RS19795	SM00421	helix_turn_helix, Lux Regulon
BE965_RS19795	SM00448	cheY-homologous receiver domain
BE965_RS19800	SM00387	Histidine kinase-like ATPases
BE965_RS19825	SM00342	helix_turn_helix, arabinose operon control protein
BE965_RS19835	SM00382	ATPases associated with a variety of cellular activities
BE965_RS19865	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BE965_RS19890	SM00382	ATPases associated with a variety of cellular activities
BE965_RS19930	SM00421	helix_turn_helix, Lux Regulon
BE965_RS19930	SM00448	cheY-homologous receiver domain
BE965_RS19975	SM00487	DEAD-like helicases superfamily
BE965_RS19975	SM00490	helicase superfamily c-terminal domain
BE965_RS19985	SM00363	S4 RNA-binding domain
BE965_RS20005	SM00382	ATPases associated with a variety of cellular activities
BE965_RS20025	SM00052	Putative diguanylate phosphodiesterase
BE965_RS20035	SM00014	Acid phosphatase homologues
BE965_RS20040	SM00833	Cobalamin synthesis protein cobW C-terminal domain
BE965_RS20050	SM00841	Elongation factor P, C-terminal
BE965_RS20050	SM01185	BE965_RS20050
BE965_RS20100	SM00100	Cyclic nucleotide-monophosphate binding domain
BE965_RS20115	SM00518	AP endonuclease family 2
BE965_RS20180	SM00354	helix_turn _helix lactose operon repressor
BE965_RS20190	SM00382	ATPases associated with a variety of cellular activities
BE965_RS20285	SM01217	BE965_RS20285
BE965_RS20300	SM00382	ATPases associated with a variety of cellular activities
BE965_RS20315	SM00422	helix_turn_helix, mercury resistance
BE965_RS20320	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BE965_RS20325	SM00448	cheY-homologous receiver domain
BE965_RS20325	SM00850	LytTr DNA-binding domain
BE965_RS20345	SM00327	von Willebrand factor (vWF) type A domain
BE965_RS20355	SM00382	ATPases associated with a variety of cellular activities
BE965_RS20370	SM00773	Proposed nucleic acid binding domain
BE965_RS20375	SM00773	Proposed nucleic acid binding domain
BE965_RS20445	SM00641	Glycosyl hydrolases family 25
BE965_RS20450	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BE965_RS20450	SM00866	BE965_RS20450
BE965_RS20470	SM01133	BE965_RS20470
BE965_RS20505	SM00829	Enoylreductase
BE965_RS20510	SM00420	helix_turn_helix, Deoxyribose operon repressor
BE965_RS20510	SM01134	BE965_RS20510
BE965_RS20515	SM00046	Diacylglycerol kinase catalytic domain (presumed)
BE965_RS20535	SM00448	cheY-homologous receiver domain
BE965_RS20535	SM00862	Transcriptional regulatory protein, C terminal
BE965_RS20540	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BE965_RS20540	SM00387	Histidine kinase-like ATPases
BE965_RS20540	SM00388	His Kinase A (phosphoacceptor) domain
BE965_RS20565	SM00327	von Willebrand factor (vWF) type A domain
BE965_RS20585	SM00478	endonuclease III
BE965_RS20585	SM01009	AlkA N-terminal domain
BE965_RS20590	SM00052	Putative diguanylate phosphodiesterase
BE965_RS20590	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BE965_RS20590	SM00091	PAS domain
BE965_RS20590	SM00267	diguanylate cyclase
BE965_RS20610	SM01091	Transporter associated domain
BE965_RS20620	SM00226	Low molecular weight phosphatase family
BE965_RS20780	SM01350	BE965_RS20780
BE965_RS20785	SM00984	UDP binding domain
BE965_RS20875	SM01321	BE965_RS20875
BE965_RS20885	SM00479	BE965_RS20885
BE965_RS20890	SM00936	Penicillin-binding protein 5, C-terminal domain 
BE965_RS20895	SM00871	Bacterial transcription activator, effector binding domain
BE965_RS20995	SM00382	ATPases associated with a variety of cellular activities
BE965_RS21045	SM00382	ATPases associated with a variety of cellular activities
BE965_RS21080	SM00382	ATPases associated with a variety of cellular activities
BE965_RS21170	SM00420	helix_turn_helix, Deoxyribose operon repressor
BE965_RS21210	SM00470	ParB-like nuclease domain
BE965_RS21320	SM00634	Bacterial Ig-like domain (group 1)
BE965_RS21355	SM00822	BE965_RS21355
BE965_RS21355	SM00823	Phosphopantetheine attachment site
BE965_RS21355	SM00824	Thioesterase
BE965_RS21355	SM00825	Beta-ketoacyl synthase
BE965_RS21355	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BE965_RS21360	SM00823	Phosphopantetheine attachment site
BE965_RS21365	SM00342	helix_turn_helix, arabinose operon control protein
BE965_RS21370	SM00382	ATPases associated with a variety of cellular activities
BE965_RS21375	SM00382	ATPases associated with a variety of cellular activities
BE965_RS21440	SM00095	Transthyretin
BE965_RS21445	SM00448	cheY-homologous receiver domain
BE965_RS21445	SM00862	Transcriptional regulatory protein, C terminal
BE965_RS21450	SM00387	Histidine kinase-like ATPases
BE965_RS21450	SM00388	His Kinase A (phosphoacceptor) domain
BE965_RS21480	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BE965_RS21515	SM00267	diguanylate cyclase
BE965_RS21540	SM00421	helix_turn_helix, Lux Regulon
BE965_RS21590	SM00382	ATPases associated with a variety of cellular activities
BE965_RS21630	SM00342	helix_turn_helix, arabinose operon control protein
BE965_RS21635	SM01321	BE965_RS21635
BE965_RS21670	SM00642	Alpha-amylase domain
BE965_RS21705	SM00062	Bacterial periplasmic substrate-binding proteins
BE965_RS21705	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BE965_RS21720	SM00382	ATPases associated with a variety of cellular activities
BE965_RS21725	SM00421	helix_turn_helix, Lux Regulon
BE965_RS21735	SM00421	helix_turn_helix, Lux Regulon
BE965_RS21735	SM00448	cheY-homologous receiver domain
BE965_RS21740	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BE965_RS21740	SM00465	GIY-YIG type nucleases (URI domain)
BE965_RS21800	SM00530	Helix-turn-helix XRE-family like proteins 
BE965_RS22120	SM00382	ATPases associated with a variety of cellular activities
BE965_RS22165	SM00073	Histidine Phosphotransfer domain
BE965_RS22165	SM00260	Two component signalling adaptor domain
BE965_RS22165	SM00387	Histidine kinase-like ATPases
BE965_RS22165	SM01231	BE965_RS22165
BE965_RS22170	SM00260	Two component signalling adaptor domain
BE965_RS22175	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BE965_RS22175	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BE965_RS22175	SM00319	Homologues of the ligand binding domain of Tar
BE965_RS22185	SM00138	Methyltransferase, chemotaxis proteins 
BE965_RS22190	SM00448	cheY-homologous receiver domain
BE965_RS22195	SM00448	cheY-homologous receiver domain
BE965_RS22220	SM00836	DALR anticodon binding domain
BE965_RS22220	SM01016	Arginyl tRNA synthetase N terminal dom
BE965_RS22300	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BE965_RS22305	SM00382	ATPases associated with a variety of cellular activities
BE965_RS22330	SM00382	ATPases associated with a variety of cellular activities
BE965_RS22340	SM00257	Lysin motif
BE965_RS22405	SM00479	BE965_RS22405
BE965_RS22470	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BE965_RS22475	SM00945	ProQ/FINO family
BE965_RS22480	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BE965_RS22480	SM00245	tail specific protease
BE965_RS22495	SM00346	helix_turn_helix isocitrate lyase regulation
BE965_RS22525	SM00357	Cold shock protein domain
BE965_RS22575	SM01091	Transporter associated domain
BE965_RS22580	SM00052	Putative diguanylate phosphodiesterase
BE965_RS22615	SM00487	DEAD-like helicases superfamily
BE965_RS22615	SM00491	BE965_RS22615
BE965_RS22635	SM00341	Helicase and RNase D C-terminal
BE965_RS22635	SM00474	3'-5' exonuclease
BE965_RS22675	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BE965_RS22675	SM00267	diguanylate cyclase
BE965_RS22695	SM00342	helix_turn_helix, arabinose operon control protein
BE965_RS22715	SM00267	diguanylate cyclase
BE965_RS22720	SM00267	diguanylate cyclase
BE965_RS22730	SM00763	PrkA AAA domain
BE965_RS22750	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BE965_RS22775	SM00829	Enoylreductase
BE965_RS22795	SM00420	helix_turn_helix, Deoxyribose operon repressor
BE965_RS22795	SM01134	BE965_RS22795
BE965_RS22810	SM00870	BE965_RS22810
BE965_RS22845	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
BE965_RS22845	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
BE965_RS22845	SM00493	BE965_RS22845
BE965_RS22850	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BE965_RS22870	SM00450	Rhodanese Homology Domain
BE965_RS22875	SM00382	ATPases associated with a variety of cellular activities
BE965_RS22955	SM00465	GIY-YIG type nucleases (URI domain)
BE965_RS22990	SM00342	helix_turn_helix, arabinose operon control protein
BE965_RS23005	SM01060	BE965_RS23005
BE965_RS23070	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BE965_RS23100	SM00873	B3/4 domain
BE965_RS23100	SM00874	tRNA synthetase B5 domain
BE965_RS23100	SM00896	Ferredoxin-fold anticodon binding domain
BE965_RS23105	SM00411	bacterial (prokaryotic) histone like domain
BE965_RS23120	SM00382	ATPases associated with a variety of cellular activities
BE965_RS23180	SM00893	Electron transfer flavoprotein domain
BE965_RS23185	SM00893	Electron transfer flavoprotein domain
BE965_RS23195	SM00342	helix_turn_helix, arabinose operon control protein
BE965_RS23205	SM00882	Coenzyme A transferase
BE965_RS23270	SM00382	ATPases associated with a variety of cellular activities
BE965_RS23290	SM00257	Lysin motif
BE965_RS23315	SM00790	Aldehyde ferredoxin oxidoreductase, N-terminal domain
BE965_RS23390	SM00354	helix_turn _helix lactose operon repressor
BE965_RS23435	SM00479	BE965_RS23435
BE965_RS23485	SM00347	helix_turn_helix multiple antibiotic resistance protein
BE965_RS23510	SM00363	S4 RNA-binding domain
BE965_RS23535	SM00478	endonuclease III
BE965_RS23535	SM00525	BE965_RS23535
BE965_RS23545	SM00900	BE965_RS23545
BE965_RS23610	SM00354	helix_turn _helix lactose operon repressor
BE965_RS23670	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BE965_RS23670	SM00387	Histidine kinase-like ATPases
BE965_RS23670	SM00388	His Kinase A (phosphoacceptor) domain
BE965_RS23675	SM00448	cheY-homologous receiver domain
BE965_RS23675	SM00862	Transcriptional regulatory protein, C terminal
BE965_RS23705	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
BE965_RS23705	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
BE965_RS23795	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BE965_RS23800	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BE965_RS23835	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BE965_RS23860	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BE965_RS23860	SM00895	BE965_RS23860
BE965_RS23890	SM00267	diguanylate cyclase
BE965_RS23915	SM00342	helix_turn_helix, arabinose operon control protein
BE965_RS23920	SM00347	helix_turn_helix multiple antibiotic resistance protein
BE965_RS23960	SM00267	diguanylate cyclase
BE965_RS23990	SM00530	Helix-turn-helix XRE-family like proteins 
BE965_RS24045	SM00342	helix_turn_helix, arabinose operon control protein
BE965_RS24090	SM00052	Putative diguanylate phosphodiesterase
BE965_RS24090	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BE965_RS24090	SM00091	PAS domain
BE965_RS24090	SM00267	diguanylate cyclase
BE965_RS24115	SM00919	Malic enzyme, NAD binding domain
BE965_RS24115	SM01274	BE965_RS24115
BE965_RS24120	SM00829	Enoylreductase
BE965_RS24130	SM00530	Helix-turn-helix XRE-family like proteins 
BE965_RS24160	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BE965_RS24190	SM00903	Flavin reductase like domain
BE965_RS24290	SM00382	ATPases associated with a variety of cellular activities
BE965_RS24300	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BE965_RS24305	SM00530	Helix-turn-helix XRE-family like proteins 
BE965_RS24320	SM00530	Helix-turn-helix XRE-family like proteins 
BE965_RS24375	SM01150	BE965_RS24375
BE965_RS24405	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BE965_RS24420	SM00382	ATPases associated with a variety of cellular activities
BE965_RS24420	SM00487	DEAD-like helicases superfamily
BE965_RS24420	SM00490	helicase superfamily c-terminal domain
BE965_RS24420	SM00847	Helicase associated domain (HA2)  Add an annotation
BE965_RS24435	SM00710	Parallel beta-helix repeats
BE965_RS24445	SM00342	helix_turn_helix, arabinose operon control protein
BE965_RS24480	SM00890	Domain of unknown function
BE965_RS24525	SM00487	DEAD-like helicases superfamily
BE965_RS24525	SM00490	helicase superfamily c-terminal domain
BE965_RS24540	SM00091	PAS domain
BE965_RS24540	SM00267	diguanylate cyclase
BE965_RS24545	SM00463	Small MutS-related domain
BE965_RS24560	SM00342	helix_turn_helix, arabinose operon control protein
BE965_RS24580	SM00100	Cyclic nucleotide-monophosphate binding domain
BE965_RS24580	SM00419	helix_turn_helix, cAMP Regulatory protein
BE965_RS24625	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BE965_RS24635	SM00091	PAS domain
BE965_RS24635	SM00382	ATPases associated with a variety of cellular activities
BE965_RS24650	SM00354	helix_turn _helix lactose operon repressor
BE965_RS24660	SM00382	ATPases associated with a variety of cellular activities
BE965_RS24705	SM00642	Alpha-amylase domain
BE965_RS24710	SM00450	Rhodanese Homology Domain
BE965_RS24735	SM00382	ATPases associated with a variety of cellular activities
BE965_RS24765	SM00382	ATPases associated with a variety of cellular activities
BE965_RS24770	SM00382	ATPases associated with a variety of cellular activities
BE965_RS24810	SM00357	Cold shock protein domain
BE965_RS24810	SM00955	BE965_RS24810
BE965_RS24820	SM00052	Putative diguanylate phosphodiesterase
BE965_RS24820	SM00091	PAS domain
BE965_RS24820	SM00267	diguanylate cyclase
BE965_RS24830	SM00420	helix_turn_helix, Deoxyribose operon repressor
BE965_RS24830	SM01134	BE965_RS24830
BE965_RS24845	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
BE965_RS24850	SM00028	Tetratricopeptide repeats
BE965_RS24860	SM00014	Acid phosphatase homologues
BE965_RS24900	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
BE965_RS24900	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
BE965_RS24900	SM00493	BE965_RS24900
BE965_RS24920	SM00822	BE965_RS24920
BE965_RS24940	SM00363	S4 RNA-binding domain
BE965_RS24955	SM00481	DNA polymerase alpha chain like domain
BE965_RS25060	SM00382	ATPases associated with a variety of cellular activities
BE965_RS25085	SM00232	JAB/MPN domain
BE965_RS25115	SM00409	Immunoglobulin
BE965_RS25280	SM00507	HNH nucleases
BE965_RS25335	SM00530	Helix-turn-helix XRE-family like proteins 
BE965_RS25430	SM00155	Phospholipase D. Active site motifs.
BE965_RS25440	SM00382	ATPases associated with a variety of cellular activities
BE965_RS25445	SM00382	ATPases associated with a variety of cellular activities
BE965_RS25485	SM00528	Domain in histone-like proteins of HNS family
BE965_RS25495	SM00448	cheY-homologous receiver domain
BE965_RS25540	SM00849	Metallo-beta-lactamase superfamily
BE965_RS25570	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BE965_RS25585	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BE965_RS25585	SM00387	Histidine kinase-like ATPases
BE965_RS25590	SM00421	helix_turn_helix, Lux Regulon
BE965_RS25590	SM00448	cheY-homologous receiver domain
BE965_RS25650	SM00937	BE965_RS25650
BE965_RS25670	SM01400	BE965_RS25670
BE965_RS25845	SM00091	PAS domain
BE965_RS25845	SM00382	ATPases associated with a variety of cellular activities
BE965_RS25855	SM01120	BE965_RS25855
BE965_RS25885	SM00382	ATPases associated with a variety of cellular activities
BE965_RS25930	SM01091	Transporter associated domain
BE965_RS25935	SM01005	Alanine racemase, C-terminal domain
BE965_RS25950	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BE965_RS26080	SM00052	Putative diguanylate phosphodiesterase
BE965_RS26105	SM00052	Putative diguanylate phosphodiesterase
BE965_RS26105	SM01034	Sensors of blue-light using FAD
BE965_RS26110	SM00422	helix_turn_helix, mercury resistance
BE965_RS26145	SM00382	ATPases associated with a variety of cellular activities
BE965_RS26185	SM00232	JAB/MPN domain
BE965_RS26215	SM00635	Bacterial Ig-like domain 2
BE965_RS26355	SM00634	Bacterial Ig-like domain (group 1)
BE965_RS26380	SM00530	Helix-turn-helix XRE-family like proteins 
BE965_RS26445	SM01329	BE965_RS26445
BE965_RS26475	SM00448	cheY-homologous receiver domain
BE965_RS26475	SM00862	Transcriptional regulatory protein, C terminal
BE965_RS26480	SM00387	Histidine kinase-like ATPases
BE965_RS26485	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
BE965_RS26500	SM00382	ATPases associated with a variety of cellular activities
BE965_RS26545	SM00382	ATPases associated with a variety of cellular activities
BE965_RS26560	SM00487	DEAD-like helicases superfamily
BE965_RS26560	SM00490	helicase superfamily c-terminal domain
BE965_RS26560	SM00982	BE965_RS26560
BE965_RS26560	SM01058	CarD-like/TRCF domain
BE965_RS26565	SM00257	Lysin motif
BE965_RS26660	SM00825	Beta-ketoacyl synthase
BE965_RS26670	SM00822	BE965_RS26670
BE965_RS26675	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BE965_RS26705	SM00363	S4 RNA-binding domain
BE965_RS26715	SM00316	Ribosomal protein S1-like RNA-binding domain
BE965_RS26730	SM00047	Lysozyme subfamily 2
BE965_RS26775	SM00858	BE965_RS26775
BE965_RS26855	SM00867	YceI-like domain 
BE965_RS26860	SM00450	Rhodanese Homology Domain
BE965_RS26910	SM00155	Phospholipase D. Active site motifs.
BE965_RS26915	SM00506	Appr-1"-p processing enzyme
BE965_RS26950	SM00421	helix_turn_helix, Lux Regulon
BE965_RS26980	SM00481	DNA polymerase alpha chain like domain
BE965_RS26995	SM00267	diguanylate cyclase
BE965_RS27000	SM00028	Tetratricopeptide repeats
BE965_RS27095	SM00903	Flavin reductase like domain
BE965_RS27130	SM00271	DnaJ molecular chaperone homology domain
BE965_RS27155	SM00448	cheY-homologous receiver domain
BE965_RS27155	SM00862	Transcriptional regulatory protein, C terminal
BE965_RS27190	SM00357	Cold shock protein domain
BE965_RS27195	SM00357	Cold shock protein domain
BE965_RS27270	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
BE965_RS27275	SM00992	Hemimethylated DNA-binding protein YccV like
BE965_RS27280	SM00881	CoA binding domain
BE965_RS27290	SM00851	MGS-like domain
BE965_RS27365	SM00382	ATPases associated with a variety of cellular activities
BE965_RS27370	SM00981	BE965_RS27370
BE965_RS27400	SM00062	Bacterial periplasmic substrate-binding proteins
BE965_RS27415	SM00382	ATPases associated with a variety of cellular activities
BE965_RS27450	SM00849	Metallo-beta-lactamase superfamily
BE965_RS27515	SM00382	ATPases associated with a variety of cellular activities
BE965_RS27520	SM00849	Metallo-beta-lactamase superfamily
BE965_RS27525	SM00411	bacterial (prokaryotic) histone like domain
BE965_RS27530	SM00316	Ribosomal protein S1-like RNA-binding domain
BE965_RS27600	SM00382	ATPases associated with a variety of cellular activities
BE965_RS27630	SM00530	Helix-turn-helix XRE-family like proteins 
BE965_RS27815	SM00857	Resolvase, N terminal domain
BE965_RS27875	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BE965_RS27885	SM00530	Helix-turn-helix XRE-family like proteins 
