locus-tag class description RG53_RS00010 PF00795 Carbon-nitrogen hydrolase RG53_RS00020 PF09317 Domain of unknown function (DUF1974) RG53_RS00020 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RG53_RS00020 PF02770 Acyl-CoA dehydrogenase, middle domain RG53_RS00020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RG53_RS00025 PF13580 SIS domain RG53_RS00030 PF13230 Glutamine amidotransferases class-II RG53_RS00035 PF03734 L,D-transpeptidase catalytic domain RG53_RS00040 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ RG53_RS00045 PF04221 RelB antitoxin RG53_RS00050 PF00877 NlpC/P60 family RG53_RS00065 PF00771 FHIPEP family RG53_RS00070 PF00691 OmpA family RG53_RS00070 PF13677 Membrane MotB of proton-channel complex MotA/MotB RG53_RS00075 PF11799 impB/mucB/samB family C-terminal domain RG53_RS00075 PF11798 IMS family HHH motif RG53_RS00075 PF00817 impB/mucB/samB family RG53_RS00080 PF13673 Acetyltransferase (GNAT) domain RG53_RS00095 PF00472 RF-1 domain RG53_RS00100 PF01546 Peptidase family M20/M25/M40 RG53_RS00100 PF07687 Peptidase dimerisation domain RG53_RS00105 PF00156 Phosphoribosyl transferase domain RG53_RS00110 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) RG53_RS00115 PF07417 Sigma factor-binding transcriptional regulator Crl RG53_RS00120 PF00267 Gram-negative porin RG53_RS00125 PF00696 Amino acid kinase family RG53_RS00125 PF01472 PUA domain RG53_RS00130 PF00171 Aldehyde dehydrogenase family RG53_RS00140 PF03466 LysR substrate binding domain RG53_RS00145 PF13478 XdhC Rossmann domain RG53_RS00145 PF02625 XdhC and CoxI family RG53_RS00150 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RG53_RS00150 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RG53_RS00155 PF03450 CO dehydrogenase flavoprotein C-terminal domain RG53_RS00155 PF00941 FAD binding domain in molybdopterin dehydrogenase RG53_RS00160 PF01799 [2Fe-2S] binding domain RG53_RS00160 PF00111 2Fe-2S iron-sulfur cluster binding domain RG53_RS00170 PF07274 Protein of unknown function (DUF1440) RG53_RS00180 PF03692 Putative zinc- or iron-chelating domain RG53_RS00195 PF16967 E-set like domain RG53_RS00195 PF15976 CS1-pili formation C-terminal RG53_RS00200 PF18649 EcpB C-terminal domain RG53_RS00205 PF16449 Fimbrillin MatB RG53_RS00210 PF00196 Bacterial regulatory proteins, luxR family RG53_RS00225 PF00444 Ribosomal protein L36 RG53_RS00230 PF01197 Ribosomal protein L31 RG53_RS00245 PF11924 Inverse autotransporter, beta-domain RG53_RS00250 PF12833 Helix-turn-helix domain RG53_RS00255 PF00248 Aldo/keto reductase family RG53_RS00260 PF04224 Protein of unknown function, DUF417 RG53_RS00265 PF07338 Protein of unknown function (DUF1471) RG53_RS00270 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG53_RS00270 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RG53_RS00275 PF12852 Cupin RG53_RS00275 PF12833 Helix-turn-helix domain RG53_RS00280 PF02754 Cysteine-rich domain RG53_RS00285 PF13183 4Fe-4S dicluster domain RG53_RS00285 PF11870 Domain of unknown function (DUF3390) RG53_RS00285 PF02589 LUD domain RG53_RS00290 PF02589 LUD domain RG53_RS00310 PF03797 Autotransporter beta-domain RG53_RS00310 PF03212 Pertactin RG53_RS00320 PF00196 Bacterial regulatory proteins, luxR family RG53_RS00320 PF00563 EAL domain RG53_RS00325 PF00589 Phage integrase family RG53_RS00335 PF05199 GMC oxidoreductase RG53_RS00335 PF00732 GMC oxidoreductase RG53_RS00340 PF00171 Aldehyde dehydrogenase family RG53_RS00345 PF00440 Bacterial regulatory proteins, tetR family RG53_RS00345 PF13977 BetI-type transcriptional repressor, C-terminal RG53_RS00355 PF02028 BCCT, betaine/carnitine/choline family transporter RG53_RS00360 PF03797 Autotransporter beta-domain RG53_RS00365 PF00563 EAL domain RG53_RS00365 PF00196 Bacterial regulatory proteins, luxR family RG53_RS00370 PF03466 LysR substrate binding domain RG53_RS00370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG53_RS00375 PF06496 Protein of unknown function (DUF1097) RG53_RS00385 PF12796 Ankyrin repeats (3 copies) RG53_RS00390 PF11392 Protein of unknown function (DUF2877) RG53_RS00395 PF00549 CoA-ligase RG53_RS00395 PF02629 CoA binding domain RG53_RS00400 PF06545 Protein of unknown function (DUF1116) RG53_RS00405 PF00696 Amino acid kinase family RG53_RS00410 PF07969 Amidohydrolase family RG53_RS00420 PF13407 Periplasmic binding protein domain RG53_RS00425 PF00005 ABC transporter RG53_RS00430 PF02653 Branched-chain amino acid transport system / permease component RG53_RS00435 PF02653 Branched-chain amino acid transport system / permease component RG53_RS00440 PF00107 Zinc-binding dehydrogenase RG53_RS00440 PF08240 Alcohol dehydrogenase GroES-like domain RG53_RS00455 PF01810 LysE type translocator RG53_RS00460 PF07338 Protein of unknown function (DUF1471) RG53_RS00465 PF02954 Bacterial regulatory protein, Fis family RG53_RS00465 PF00158 Sigma-54 interaction domain RG53_RS00465 PF06506 Propionate catabolism activator RG53_RS00475 PF00285 Citrate synthase, C-terminal domain RG53_RS00480 PF03972 MmgE/PrpD family RG53_RS00485 PF16177 Acetyl-coenzyme A synthetase N-terminus RG53_RS00485 PF00501 AMP-binding enzyme RG53_RS00485 PF13193 AMP-binding enzyme C-terminal domain RG53_RS00495 PF02371 Transposase IS116/IS110/IS902 family RG53_RS00495 PF01548 Transposase RG53_RS00500 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin RG53_RS00505 PF07969 Amidohydrolase family RG53_RS00510 PF03466 LysR substrate binding domain RG53_RS00510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG53_RS00515 PF00484 Carbonic anhydrase RG53_RS00520 PF02560 Cyanate lyase C-terminal domain RG53_RS00525 PF07690 Major Facilitator Superfamily RG53_RS00530 PF00132 Bacterial transferase hexapeptide (six repeats) RG53_RS00530 PF12464 Maltose acetyltransferase RG53_RS00535 PF01306 LacY proton/sugar symporter RG53_RS00540 PF00703 Glycosyl hydrolases family 2 RG53_RS00540 PF02836 Glycosyl hydrolases family 2, TIM barrel domain RG53_RS00540 PF02929 Beta galactosidase small chain RG53_RS00540 PF02837 Glycosyl hydrolases family 2, sugar binding domain RG53_RS00540 PF16353 Domain of unknown function(DUF4981) RG53_RS00550 PF00356 Bacterial regulatory proteins, lacI family RG53_RS00555 PF01614 Bacterial transcriptional regulator RG53_RS00555 PF09339 IclR helix-turn-helix domain RG53_RS00560 PF01494 FAD binding domain RG53_RS00565 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase RG53_RS00570 PF12697 Alpha/beta hydrolase family RG53_RS00575 PF01557 Fumarylacetoacetate (FAA) hydrolase family RG53_RS00580 PF01118 Semialdehyde dehydrogenase, NAD binding domain RG53_RS00580 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation RG53_RS00585 PF00682 HMGL-like RG53_RS00585 PF07836 DmpG-like communication domain RG53_RS00590 PF07690 Major Facilitator Superfamily RG53_RS00595 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) RG53_RS00600 PF00756 Putative esterase RG53_RS00605 PF00107 Zinc-binding dehydrogenase RG53_RS00605 PF08240 Alcohol dehydrogenase GroES-like domain RG53_RS00610 PF02583 Metal-sensitive transcriptional repressor RG53_RS00620 PF00132 Bacterial transferase hexapeptide (six repeats) RG53_RS00625 PF00535 Glycosyl transferase family 2 RG53_RS00630 PF02585 GlcNAc-PI de-N-acetylase RG53_RS00640 PF04069 Substrate binding domain of ABC-type glycine betaine transport system RG53_RS00645 PF00005 ABC transporter RG53_RS00650 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS00655 PF02668 Taurine catabolism dioxygenase TauD, TfdA family RG53_RS00660 PF00490 Delta-aminolevulinic acid dehydratase RG53_RS00670 PF03797 Autotransporter beta-domain RG53_RS00670 PF03212 Pertactin RG53_RS00675 PF15977 Winged helix-turn-helix DNA binding RG53_RS00680 PF00144 Beta-lactamase RG53_RS00690 PF05992 SbmA/BacA-like family RG53_RS00695 PF07759 Protein of unknown function (DUF1615) RG53_RS00700 PF10954 Protein of unknown function (DUF2755) RG53_RS00705 PF10953 Protein of unknown function (DUF2754) RG53_RS00710 PF07478 D-ala D-ala ligase C-terminus RG53_RS00710 PF01820 D-ala D-ala ligase N-terminus RG53_RS00720 PF10796 Sigma-S stabilisation anti-adaptor protein RG53_RS00725 PF00245 Alkaline phosphatase RG53_RS00730 PF07769 psiF repeat RG53_RS00735 PF00990 Diguanylate cyclase, GGDEF domain RG53_RS00735 PF05230 MASE2 domain RG53_RS00740 PF03807 NADP oxidoreductase coenzyme F420-dependent RG53_RS00740 PF14748 Pyrroline-5-carboxylate reductase dimerisation RG53_RS00745 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 RG53_RS00750 PF01202 Shikimate kinase RG53_RS00755 PF16362 YaiA protein RG53_RS00765 PF07302 AroM protein RG53_RS00770 PF06865 Pyrimidine/purine nucleoside phosphorylase RG53_RS00780 PF10971 Protein of unknown function (DUF2773) RG53_RS00785 PF04381 Putative exonuclease, RdgC RG53_RS00795 PF07690 Major Facilitator Superfamily RG53_RS00800 PF13476 AAA domain RG53_RS00805 PF00149 Calcineurin-like phosphoesterase RG53_RS00805 PF12320 Type 5 capsule protein repressor C-terminal domain RG53_RS00810 PF00072 Response regulator receiver domain RG53_RS00810 PF00486 Transcriptional regulatory protein, C terminal RG53_RS00815 PF00512 His Kinase A (phospho-acceptor) domain RG53_RS00815 PF00989 PAS fold RG53_RS00815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG53_RS00815 PF11808 Phosphate regulon sensor protein PhoR RG53_RS00820 PF05525 Branched-chain amino acid transport protein RG53_RS00825 PF00324 Amino acid permease RG53_RS00830 PF00128 Alpha amylase, catalytic domain RG53_RS00830 PF02903 Alpha amylase, N-terminal ig-like domain RG53_RS00835 PF04336 Acyl carrier protein phosphodiesterase RG53_RS00840 PF02547 Queuosine biosynthesis protein RG53_RS00845 PF01702 Queuine tRNA-ribosyltransferase RG53_RS00850 PF02699 Preprotein translocase subunit RG53_RS00855 PF13721 SecD export protein N-terminal TM region RG53_RS00855 PF02355 Protein export membrane protein RG53_RS00855 PF07549 SecD/SecF GG Motif RG53_RS00860 PF02355 Protein export membrane protein RG53_RS00860 PF07549 SecD/SecF GG Motif RG53_RS00865 PF01844 HNH endonuclease RG53_RS00870 PF03502 Nucleoside-specific channel-forming protein, Tsx RG53_RS00875 PF11622 Protein of unknown function (DUF3251) RG53_RS00880 PF03477 ATP cone domain RG53_RS00885 PF01872 RibD C-terminal domain RG53_RS00885 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RG53_RS00890 PF00885 6,7-dimethyl-8-ribityllumazine synthase RG53_RS00895 PF01029 NusB family RG53_RS00900 PF02769 AIR synthase related protein, C-terminal domain RG53_RS00900 PF00586 AIR synthase related protein, N-terminal domain RG53_RS00905 PF04608 Phosphatidylglycerophosphatase A RG53_RS00910 PF00248 Aldo/keto reductase family RG53_RS00915 PF13292 1-deoxy-D-xylulose-5-phosphate synthase RG53_RS00915 PF02780 Transketolase, C-terminal domain RG53_RS00915 PF02779 Transketolase, pyrimidine binding domain RG53_RS00920 PF00348 Polyprenyl synthetase RG53_RS00925 PF02609 Exonuclease VII small subunit RG53_RS00930 PF02568 Thiamine biosynthesis protein (ThiI) RG53_RS00930 PF02926 THUMP domain RG53_RS00935 PF01965 DJ-1/PfpI family RG53_RS00940 PF02558 Ketopantoate reductase PanE/ApbA RG53_RS00940 PF08546 Ketopantoate reductase PanE/ApbA C terminal RG53_RS00945 PF04461 Protein of unknown function (DUF520) RG53_RS00950 PF07690 Major Facilitator Superfamily RG53_RS00970 PF01040 UbiA prenyltransferase family RG53_RS00975 PF03626 Prokaryotic Cytochrome C oxidase subunit IV RG53_RS00980 PF00510 Cytochrome c oxidase subunit III RG53_RS00985 PF00115 Cytochrome C and Quinol oxidase polypeptide I RG53_RS00990 PF06481 COX Aromatic Rich Motif RG53_RS00990 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RG53_RS00995 PF07690 Major Facilitator Superfamily RG53_RS01000 PF08139 Prokaryotic membrane lipoprotein lipid attachment site RG53_RS01000 PF03923 Uncharacterized lipoprotein RG53_RS01005 PF01722 BolA-like protein RG53_RS01015 PF05698 Bacterial trigger factor protein (TF) C-terminus RG53_RS01015 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RG53_RS01015 PF05697 Bacterial trigger factor protein (TF) RG53_RS01020 PF00574 Clp protease RG53_RS01025 PF07724 AAA domain (Cdc48 subfamily) RG53_RS01025 PF10431 C-terminal, D2-small domain, of ClpB protein RG53_RS01025 PF06689 ClpX C4-type zinc finger RG53_RS01030 PF05362 Lon protease (S16) C-terminal proteolytic domain RG53_RS01030 PF02190 ATP-dependent protease La (LON) substrate-binding domain RG53_RS01030 PF00004 ATPase family associated with various cellular activities (AAA) RG53_RS01035 PF00216 Bacterial DNA-binding protein RG53_RS01040 PF13145 PPIC-type PPIASE domain RG53_RS01055 PF06508 Queuosine biosynthesis protein QueC RG53_RS01060 PF12793 Sugar transport-related sRNA regulator N-term RG53_RS01060 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RG53_RS01070 PF01037 Lrp/AsnC ligand binding domain RG53_RS01070 PF13404 AsnC-type helix-turn-helix domain RG53_RS01075 PF00005 ABC transporter RG53_RS01075 PF00664 ABC transporter transmembrane region RG53_RS01080 PF00664 ABC transporter transmembrane region RG53_RS01080 PF00005 ABC transporter RG53_RS01085 PF00543 Nitrogen regulatory protein P-II RG53_RS01090 PF00909 Ammonium Transporter Family RG53_RS01100 PF09619 Type III secretion system lipoprotein chaperone (YscW) RG53_RS01105 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RG53_RS01115 PF07237 Protein of unknown function (DUF1428) RG53_RS01120 PF12792 CSS motif domain associated with EAL RG53_RS01120 PF00563 EAL domain RG53_RS01125 PF10777 Inner membrane protein YlaC RG53_RS01130 PF12464 Maltose acetyltransferase RG53_RS01130 PF14602 Hexapeptide repeat of succinyl-transferase RG53_RS01135 PF05321 Haemolysin expression modulating protein RG53_RS01140 PF10757 Biofilm formation regulator YbaJ RG53_RS01145 PF00873 AcrB/AcrD/AcrF family RG53_RS01150 PF00529 HlyD membrane-fusion protein of T1SS RG53_RS01150 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RG53_RS01155 PF00440 Bacterial regulatory proteins, tetR family RG53_RS01155 PF08361 MAATS-type transcriptional repressor, C-terminal region RG53_RS01165 PF12795 Mechanosensitive ion channel porin domain RG53_RS01165 PF00924 Mechanosensitive ion channel RG53_RS01165 PF12794 Mechanosensitive ion channel inner membrane domain 1 RG53_RS01175 PF10689 Protein of unknown function (DUF2496) RG53_RS01180 PF07445 Primosomal replication protein priC RG53_RS01185 PF04304 Protein of unknown function (DUF454) RG53_RS01195 PF00156 Phosphoribosyl transferase domain RG53_RS01200 PF12169 DNA polymerase III subunits gamma and tau domain III RG53_RS01200 PF12170 DNA polymerase III tau subunit V interacting with alpha RG53_RS01200 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding RG53_RS01205 PF02575 YbaB/EbfC DNA-binding family RG53_RS01210 PF13662 Toprim domain RG53_RS01210 PF02132 RecR protein RG53_RS01215 PF00183 Hsp90 protein RG53_RS01215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG53_RS01220 PF05191 Adenylate kinase, active site lid RG53_RS01225 PF00762 Ferrochelatase RG53_RS01230 PF07859 alpha/beta hydrolase fold RG53_RS01235 PF00294 pfkB family carbohydrate kinase RG53_RS01240 PF00999 Sodium/hydrogen exchanger family RG53_RS01240 PF02254 TrkA-N domain RG53_RS01245 PF07690 Major Facilitator Superfamily RG53_RS01255 PF02872 5'-nucleotidase, C-terminal domain RG53_RS01255 PF00149 Calcineurin-like phosphoesterase RG53_RS01260 PF04073 Aminoacyl-tRNA editing domain RG53_RS01265 PF01963 TraB family RG53_RS01270 PF01381 Helix-turn-helix RG53_RS01275 PF00403 Heavy-metal-associated domain RG53_RS01280 PF04960 Glutaminase RG53_RS01285 PF13520 Amino acid permease RG53_RS01295 PF13411 MerR HTH family regulatory protein RG53_RS01300 PF01957 NfeD-like C-terminal, partner-binding RG53_RS01305 PF16200 C-terminal region of band_7 RG53_RS01305 PF01145 SPFH domain / Band 7 family RG53_RS01310 PF00005 ABC transporter RG53_RS01315 PF03649 Uncharacterised protein family (UPF0014) RG53_RS01320 PF00085 Thioredoxin RG53_RS01325 PF00106 short chain dehydrogenase RG53_RS01330 PF13472 GDSL-like Lipase/Acylhydrolase family RG53_RS01335 PF00005 ABC transporter RG53_RS01345 PF05593 RHS Repeat RG53_RS01345 PF14220 Domain of unknown function (DUF4329) RG53_RS01345 PF03527 RHS protein RG53_RS01370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG53_RS01370 PF03466 LysR substrate binding domain RG53_RS01375 PF04115 Ureidoglycolate lyase RG53_RS01380 PF09339 IclR helix-turn-helix domain RG53_RS01380 PF01614 Bacterial transcriptional regulator RG53_RS01385 PF00205 Thiamine pyrophosphate enzyme, central domain RG53_RS01385 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RG53_RS01385 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RG53_RS01390 PF01261 Xylose isomerase-like TIM barrel RG53_RS01395 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RG53_RS01395 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RG53_RS01400 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin RG53_RS01405 PF01979 Amidohydrolase family RG53_RS01410 PF00860 Permease family RG53_RS01415 PF02595 Glycerate kinase family RG53_RS01420 PF07883 Cupin domain RG53_RS01420 PF05899 Protein of unknown function (DUF861) RG53_RS01425 PF01546 Peptidase family M20/M25/M40 RG53_RS01430 PF02615 Malate/L-lactate dehydrogenase RG53_RS01435 PF00549 CoA-ligase RG53_RS01435 PF02629 CoA binding domain RG53_RS01440 PF06545 Protein of unknown function (DUF1116) RG53_RS01445 PF11392 Protein of unknown function (DUF2877) RG53_RS01450 PF00696 Amino acid kinase family RG53_RS01455 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain RG53_RS01455 PF02222 ATP-grasp domain RG53_RS01460 PF00731 AIR carboxylase RG53_RS01470 PF12850 Calcineurin-like phosphoesterase superfamily domain RG53_RS01475 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RG53_RS01480 PF01406 tRNA synthetases class I (C) catalytic domain RG53_RS01480 PF09190 DALR domain RG53_RS01485 PF04307 LexA-binding, inner membrane-associated putative hydrolase RG53_RS01495 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RG53_RS01495 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RG53_RS01500 PF00419 Fimbrial protein RG53_RS01505 PF02753 Pili assembly chaperone PapD, C-terminal domain RG53_RS01505 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RG53_RS01510 PF13953 PapC C-terminal domain RG53_RS01510 PF13954 PapC N-terminal domain RG53_RS01510 PF00577 Outer membrane usher protein RG53_RS01515 PF00419 Fimbrial protein RG53_RS01520 PF00419 Fimbrial protein RG53_RS01525 PF00072 Response regulator receiver domain RG53_RS01525 PF00196 Bacterial regulatory proteins, luxR family RG53_RS01535 PF12833 Helix-turn-helix domain RG53_RS01545 PF14488 Domain of unknown function (DUF4434) RG53_RS01550 PF13283 Bacteriophage N adsorption protein A C-term RG53_RS01555 PF13632 Glycosyl transferase family group 2 RG53_RS01555 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain RG53_RS01560 PF13808 DDE_Tnp_1-associated RG53_RS01560 PF01609 Transposase DDE domain RG53_RS01615 PF05488 PAAR motif RG53_RS01615 PF05593 RHS Repeat RG53_RS01625 PF04717 Type VI secretion system, phage-baseplate injector RG53_RS01635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG53_RS01635 PF00512 His Kinase A (phospho-acceptor) domain RG53_RS01635 PF00672 HAMP domain RG53_RS01640 PF00072 Response regulator receiver domain RG53_RS01640 PF00486 Transcriptional regulatory protein, C terminal RG53_RS01650 PF02321 Outer membrane efflux protein RG53_RS01655 PF11604 Copper binding periplasmic protein CusF RG53_RS01660 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RG53_RS01660 PF00529 HlyD membrane-fusion protein of T1SS RG53_RS01665 PF00873 AcrB/AcrD/AcrF family RG53_RS01670 PF00324 Amino acid permease RG53_RS01675 PF00924 Mechanosensitive ion channel RG53_RS01680 PF00881 Nitroreductase family RG53_RS01685 PF04237 YjbR RG53_RS01690 PF06643 Protein of unknown function (DUF1158) RG53_RS01695 PF04107 Glutamate-cysteine ligase family 2(GCS2) RG53_RS01710 PF01848 Hok/gef family RG53_RS01720 PF01848 Hok/gef family RG53_RS01725 PF17837 4'-phosphopantetheinyl transferase N-terminal domain RG53_RS01725 PF01648 4'-phosphopantetheinyl transferase superfamily RG53_RS01730 PF00593 TonB dependent receptor RG53_RS01730 PF07715 TonB-dependent Receptor Plug Domain RG53_RS01735 PF00756 Putative esterase RG53_RS01735 PF11806 Domain of unknown function (DUF3327) RG53_RS01740 PF03621 MbtH-like protein RG53_RS01745 PF00975 Thioesterase domain RG53_RS01745 PF00550 Phosphopantetheine attachment site RG53_RS01745 PF00668 Condensation domain RG53_RS01745 PF00501 AMP-binding enzyme RG53_RS01750 PF02706 Chain length determinant protein RG53_RS01755 PF00005 ABC transporter RG53_RS01760 PF01032 FecCD transport family RG53_RS01765 PF01032 FecCD transport family RG53_RS01770 PF05977 Transmembrane secretion effector RG53_RS01775 PF01497 Periplasmic binding protein RG53_RS01785 PF00425 chorismate binding enzyme RG53_RS01790 PF13193 AMP-binding enzyme C-terminal domain RG53_RS01790 PF00501 AMP-binding enzyme RG53_RS01795 PF00550 Phosphopantetheine attachment site RG53_RS01795 PF00857 Isochorismatase family RG53_RS01805 PF03061 Thioesterase superfamily RG53_RS01810 PF13722 5TM C-terminal transporter carbon starvation CstA RG53_RS01810 PF02554 Carbon starvation protein CstA RG53_RS01815 PF04328 Selenoprotein, putative RG53_RS01820 PF00465 Iron-containing alcohol dehydrogenase RG53_RS01825 PF00155 Aminotransferase class I and II RG53_RS01830 PF02195 ParB-like nuclease domain RG53_RS01835 PF11922 Domain of unknown function (DUF3440) RG53_RS01835 PF01507 Phosphoadenosine phosphosulfate reductase family RG53_RS01840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG53_RS01840 PF03466 LysR substrate binding domain RG53_RS01845 PF13098 Thioredoxin-like domain RG53_RS01850 PF00578 AhpC/TSA family RG53_RS01850 PF10417 C-terminal domain of 1-Cys peroxiredoxin RG53_RS01855 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG53_RS01855 PF13192 Thioredoxin domain RG53_RS01860 PF00582 Universal stress protein family RG53_RS01865 PF08240 Alcohol dehydrogenase GroES-like domain RG53_RS01865 PF13823 Alcohol dehydrogenase GroES-associated RG53_RS01865 PF00107 Zinc-binding dehydrogenase RG53_RS01875 PF01272 Transcription elongation factor, GreA/GreB, C-term RG53_RS01875 PF14760 Rnk N-terminus RG53_RS01885 PF00445 Ribonuclease T2 family RG53_RS01890 PF00939 Sodium:sulfate symporter transmembrane region RG53_RS01895 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase RG53_RS01900 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase RG53_RS01905 PF04223 Citrate lyase, alpha subunit (CitF) RG53_RS01910 PF03328 HpcH/HpaI aldolase/citrate lyase family RG53_RS01915 PF06857 Malonate decarboxylase delta subunit (MdcD) RG53_RS01920 PF08218 Citrate lyase ligase C-terminal domain RG53_RS01925 PF00989 PAS fold RG53_RS01925 PF17203 Single cache domain 3 RG53_RS01925 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain RG53_RS01925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG53_RS01930 PF00072 Response regulator receiver domain RG53_RS01930 PF12431 Transcriptional regulator RG53_RS01935 PF03606 C4-dicarboxylate anaerobic carrier RG53_RS01945 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP RG53_RS01950 PF00313 'Cold-shock' DNA-binding domain RG53_RS01955 PF02537 CrcB-like protein, Camphor Resistance (CrcB) RG53_RS01960 PF00795 Carbon-nitrogen hydrolase RG53_RS01965 PF02416 mttA/Hcf106 family RG53_RS01970 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family RG53_RS01970 PF04055 Radical SAM superfamily RG53_RS01980 PF03466 LysR substrate binding domain RG53_RS01980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG53_RS01990 PF03099 Biotin/lipoate A/B protein ligase family RG53_RS01995 PF04359 Protein of unknown function (DUF493) RG53_RS02000 PF00768 D-alanyl-D-alanine carboxypeptidase RG53_RS02000 PF07943 Penicillin-binding protein 5, C-terminal domain RG53_RS02005 PF05036 Sporulation related domain RG53_RS02005 PF03330 Lytic transglycolase RG53_RS02010 PF01098 Cell cycle protein RG53_RS02015 PF00905 Penicillin binding protein transpeptidase domain RG53_RS02015 PF03717 Penicillin-binding Protein dimerisation domain RG53_RS02020 PF02590 Predicted SPOUT methyltransferase RG53_RS02030 PF00300 Histidine phosphatase superfamily (branch 1) RG53_RS02035 PF01467 Cytidylyltransferase-like RG53_RS02040 PF06144 DNA polymerase III, delta subunit RG53_RS02040 PF14840 Processivity clamp loader gamma complex DNA pol III C-term RG53_RS02045 PF04390 Lipopolysaccharide-assembly RG53_RS02050 PF08264 Anticodon-binding domain of tRNA RG53_RS02050 PF00133 tRNA synthetases class I (I, L, M and V) RG53_RS02050 PF13603 Leucyl-tRNA synthetase, Domain 2 RG53_RS02055 PF07295 Zinc-ribbon containing domain RG53_RS02060 PF08238 Sel1 repeat RG53_RS02065 PF06889 Protein of unknown function (DUF1266) RG53_RS02075 PF08238 Sel1 repeat RG53_RS02080 PF06889 Protein of unknown function (DUF1266) RG53_RS02090 PF00012 Hsp70 protein RG53_RS02095 PF01156 Inosine-uridine preferring nucleoside hydrolase RG53_RS02100 PF00005 ABC transporter RG53_RS02105 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS02110 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS02115 PF00497 Bacterial extracellular solute-binding proteins, family 3 RG53_RS02130 PF00795 Carbon-nitrogen hydrolase RG53_RS02135 PF00571 CBS domain RG53_RS02135 PF03471 Transporter associated domain RG53_RS02140 PF02130 Uncharacterized protein family UPF0054 RG53_RS02145 PF02562 PhoH-like protein RG53_RS02150 PF01938 TRAM domain RG53_RS02150 PF04055 Radical SAM superfamily RG53_RS02150 PF00919 Uncharacterized protein family UPF0004 RG53_RS02155 PF01494 FAD binding domain RG53_RS02200 PF00733 Asparagine synthase RG53_RS02200 PF13537 Glutamine amidotransferase domain RG53_RS02205 PF13344 Haloacid dehalogenase-like hydrolase RG53_RS02210 PF01047 MarR family RG53_RS02210 PF00480 ROK family RG53_RS02215 PF01979 Amidohydrolase family RG53_RS02220 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase RG53_RS02225 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RG53_RS02225 PF02378 Phosphotransferase system, EIIC RG53_RS02225 PF00367 phosphotransferase system, EIIB RG53_RS02230 PF00749 tRNA synthetases class I (E and Q), catalytic domain RG53_RS02230 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain RG53_RS02240 PF03573 outer membrane porin, OprD family RG53_RS02245 PF13982 YbfN-like lipoprotein RG53_RS02250 PF01475 Ferric uptake regulator family RG53_RS02265 PF00258 Flavodoxin RG53_RS02270 PF01402 Ribbon-helix-helix protein, copG family RG53_RS02275 PF12697 Alpha/beta hydrolase family RG53_RS02280 PF17206 SeqA protein N-terminal domain RG53_RS02280 PF03925 SeqA protein C-terminal domain RG53_RS02285 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RG53_RS02285 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RG53_RS02285 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RG53_RS02285 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RG53_RS02290 PF13520 Amino acid permease RG53_RS02295 PF01276 Orn/Lys/Arg decarboxylase, major domain RG53_RS02295 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain RG53_RS02295 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain RG53_RS02310 PF00072 Response regulator receiver domain RG53_RS02310 PF00486 Transcriptional regulatory protein, C terminal RG53_RS02315 PF02702 Osmosensitive K+ channel His kinase sensor domain RG53_RS02315 PF00512 His Kinase A (phospho-acceptor) domain RG53_RS02315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG53_RS02315 PF13492 GAF domain RG53_RS02315 PF13493 Domain of unknown function (DUF4118) RG53_RS02320 PF02669 K+-transporting ATPase, c chain RG53_RS02330 PF03814 Potassium-transporting ATPase A subunit RG53_RS02335 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) RG53_RS02340 PF10725 Protein of unknown function (DUF2517) RG53_RS02345 PF03527 RHS protein RG53_RS02345 PF05593 RHS Repeat RG53_RS02355 PF05593 RHS Repeat RG53_RS02355 PF03527 RHS protein RG53_RS02365 PF13808 DDE_Tnp_1-associated RG53_RS02370 PF01609 Transposase DDE domain RG53_RS02370 PF13808 DDE_Tnp_1-associated RG53_RS02375 PF08349 Protein of unknown function (DUF1722) RG53_RS02380 PF00875 DNA photolyase RG53_RS02380 PF03441 FAD binding domain of DNA photolyase RG53_RS02385 PF00854 POT family RG53_RS02390 PF01784 NIF3 (NGG1p interacting factor 3) RG53_RS02395 PF02682 Carboxyltransferase domain, subdomain C and D RG53_RS02400 PF02626 Carboxyltransferase domain, subdomain A and B RG53_RS02405 PF03746 LamB/YcsF family RG53_RS02410 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain RG53_RS02410 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain RG53_RS02410 PF06827 Zinc finger found in FPG and IleRS RG53_RS02415 PF05145 Transition state regulatory protein AbrB RG53_RS02420 PF00419 Fimbrial protein RG53_RS02425 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RG53_RS02425 PF02753 Pili assembly chaperone PapD, C-terminal domain RG53_RS02430 PF13954 PapC N-terminal domain RG53_RS02430 PF00577 Outer membrane usher protein RG53_RS02430 PF13953 PapC C-terminal domain RG53_RS02435 PF00419 Fimbrial protein RG53_RS02440 PF00285 Citrate synthase, C-terminal domain RG53_RS02460 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RG53_RS02465 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RG53_RS02470 PF02910 Fumarate reductase flavoprotein C-term RG53_RS02470 PF00890 FAD binding domain RG53_RS02475 PF13085 2Fe-2S iron-sulfur cluster binding domain RG53_RS02485 PF16078 2-oxoglutarate dehydrogenase N-terminus RG53_RS02485 PF00676 Dehydrogenase E1 component RG53_RS02485 PF16870 2-oxoglutarate dehydrogenase C-terminal RG53_RS02485 PF02779 Transketolase, pyrimidine binding domain RG53_RS02490 PF02817 e3 binding domain RG53_RS02490 PF00364 Biotin-requiring enzyme RG53_RS02490 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RG53_RS02495 PF08442 ATP-grasp domain RG53_RS02495 PF00549 CoA-ligase RG53_RS02500 PF02629 CoA binding domain RG53_RS02500 PF00549 CoA-ligase RG53_RS02505 PF00392 Bacterial regulatory proteins, gntR family RG53_RS02505 PF07702 UTRA domain RG53_RS02510 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RG53_RS02510 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RG53_RS02510 PF02378 Phosphotransferase system, EIIC RG53_RS02515 PF09261 Alpha mannosidase middle domain RG53_RS02515 PF07748 Glycosyl hydrolases family 38 C-terminal domain RG53_RS02515 PF01074 Glycosyl hydrolases family 38 N-terminal domain RG53_RS02525 PF01654 Cytochrome bd terminal oxidase subunit I RG53_RS02530 PF02322 Cytochrome bd terminal oxidase subunit II RG53_RS02535 PF08173 Membrane bound YbgT-like protein RG53_RS02540 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) RG53_RS02545 PF03061 Thioesterase superfamily RG53_RS02550 PF01618 MotA/TolQ/ExbB proton channel family RG53_RS02555 PF02472 Biopolymer transport protein ExbD/TolR RG53_RS02560 PF06519 TolA C-terminal RG53_RS02565 PF04052 TolB amino-terminal domain RG53_RS02565 PF07676 WD40-like Beta Propeller Repeat RG53_RS02570 PF00691 OmpA family RG53_RS02575 PF13174 Tetratricopeptide repeat RG53_RS02575 PF16331 TolA binding protein trimerisation RG53_RS02620 PF02445 Quinolinate synthetase A protein RG53_RS02625 PF04973 Nicotinamide mononucleotide transporter RG53_RS02630 PF01545 Cation efflux family RG53_RS02635 PF13985 YbgS-like protein RG53_RS02645 PF00793 DAHP synthetase I family RG53_RS02650 PF00300 Histidine phosphatase superfamily (branch 1) RG53_RS02655 PF01263 Aldose 1-epimerase RG53_RS02660 PF08544 GHMP kinases C terminal RG53_RS02660 PF00288 GHMP kinases N terminal domain RG53_RS02660 PF10509 Galactokinase galactose-binding signature RG53_RS02665 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain RG53_RS02665 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain RG53_RS02670 PF16363 GDP-mannose 4,6 dehydratase RG53_RS02675 PF00005 ABC transporter RG53_RS02680 PF03459 TOBE domain RG53_RS02680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG53_RS02685 PF10766 Multidrug efflux pump-associated protein AcrZ RG53_RS02700 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS02705 PF03459 TOBE domain RG53_RS02705 PF00005 ABC transporter RG53_RS02715 PF10282 Lactonase, 7-bladed beta-propeller RG53_RS02720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG53_RS02720 PF03466 LysR substrate binding domain RG53_RS02725 PF04303 PrpF protein RG53_RS02730 PF00939 Sodium:sulfate symporter transmembrane region RG53_RS02735 PF00330 Aconitase family (aconitate hydratase) RG53_RS02735 PF00694 Aconitase C-terminal domain RG53_RS02740 PF01095 Pectinesterase RG53_RS02750 PF01161 Phosphatidylethanolamine-binding protein RG53_RS02755 PF00202 Aminotransferase class-III RG53_RS02760 PF04055 Radical SAM superfamily RG53_RS02760 PF06968 Biotin and Thiamin Synthesis associated domain RG53_RS02765 PF00155 Aminotransferase class I and II RG53_RS02770 PF08241 Methyltransferase domain RG53_RS02780 PF04851 Type III restriction enzyme, res subunit RG53_RS02780 PF02151 UvrB/uvrC motif RG53_RS02780 PF12344 Ultra-violet resistance protein B RG53_RS02780 PF17757 UvrB interaction domain RG53_RS02780 PF00271 Helicase conserved C-terminal domain RG53_RS02785 PF01933 Uncharacterised protein family UPF0052 RG53_RS02790 PF06463 Molybdenum Cofactor Synthesis C RG53_RS02790 PF04055 Radical SAM superfamily RG53_RS02795 PF00994 Probable molybdopterin binding domain RG53_RS02800 PF01967 MoaC family RG53_RS02805 PF02597 ThiS family RG53_RS02810 PF02391 MoaE protein RG53_RS02815 PF01027 Inhibitor of apoptosis-promoting Bax1 RG53_RS02820 PF01027 Inhibitor of apoptosis-promoting Bax1 RG53_RS02825 PF03706 Lysylphosphatidylglycerol synthase TM region RG53_RS02830 PF13091 PLD-like domain RG53_RS02835 PF03372 Endonuclease/Exonuclease/phosphatase family RG53_RS02840 PF11076 Putative inner membrane protein YbhQ RG53_RS02855 PF00005 ABC transporter RG53_RS02860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RG53_RS02865 PF09209 Tetracyclin repressor-like, C-terminal domain RG53_RS02865 PF00440 Bacterial regulatory proteins, tetR family RG53_RS02870 PF00271 Helicase conserved C-terminal domain RG53_RS02870 PF00270 DEAD/DEAH box helicase RG53_RS02875 PF08719 Domain of unknown function (DUF1768) RG53_RS02885 PF00270 DEAD/DEAH box helicase RG53_RS02885 PF13307 Helicase C-terminal domain RG53_RS02885 PF06733 DEAD_2 RG53_RS02890 PF02885 Glycosyl transferase family, helical bundle domain RG53_RS02895 PF02615 Malate/L-lactate dehydrogenase RG53_RS02900 PF07338 Protein of unknown function (DUF1471) RG53_RS02905 PF01258 Prokaryotic dksA/traR C4-type zinc finger RG53_RS02910 PF18331 PKHD-type hydroxylase C-terminal domain RG53_RS02910 PF13640 2OG-Fe(II) oxygenase superfamily RG53_RS02915 PF07715 TonB-dependent Receptor Plug Domain RG53_RS02915 PF00593 TonB dependent receptor RG53_RS02920 PF07338 Protein of unknown function (DUF1471) RG53_RS02925 PF05971 RNA methyltransferase RG53_RS02930 PF00924 Mechanosensitive ion channel RG53_RS02940 PF00005 ABC transporter RG53_RS02945 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS02950 PF00497 Bacterial extracellular solute-binding proteins, family 3 RG53_RS02965 PF00210 Ferritin-like domain RG53_RS02975 PF00892 EamA-like transporter family RG53_RS02980 PF13505 Outer membrane protein beta-barrel domain RG53_RS02985 PF00884 Sulfatase RG53_RS02995 PF02742 Iron dependent repressor, metal binding and dimerisation domain RG53_RS02995 PF01325 Iron dependent repressor, N-terminal DNA binding domain RG53_RS03000 PF03600 Citrate transporter RG53_RS03005 PF17969 L,D-transpeptidase C-terminal domain RG53_RS03005 PF03734 L,D-transpeptidase catalytic domain RG53_RS03010 PF12848 ABC transporter RG53_RS03010 PF00005 ABC transporter RG53_RS03015 PF01548 Transposase RG53_RS03015 PF02371 Transposase IS116/IS110/IS902 family RG53_RS03020 PF07350 Protein of unknown function (DUF1479) RG53_RS03030 PF02901 Pyruvate formate lyase-like RG53_RS03030 PF01228 Glycine radical RG53_RS03035 PF04055 Radical SAM superfamily RG53_RS03040 PF00923 Transaldolase/Fructose-6-phosphate aldolase RG53_RS03045 PF00899 ThiF family RG53_RS03050 PF03453 MoeA N-terminal region (domain I and II) RG53_RS03050 PF03454 MoeA C-terminal region (domain IV) RG53_RS03050 PF00994 Probable molybdopterin binding domain RG53_RS03055 PF01112 Asparaginase RG53_RS03060 PF00005 ABC transporter RG53_RS03060 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RG53_RS03065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RG53_RS03070 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS03075 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS03075 PF12911 N-terminal TM domain of oligopeptide transport permease C RG53_RS03080 PF17153 Periplasmic sensor domain, extracellular RG53_RS03080 PF00563 EAL domain RG53_RS03085 PF00990 Diguanylate cyclase, GGDEF domain RG53_RS03085 PF17156 Gammaproteobacterial periplasmic sensor domain RG53_RS03090 PF18693 TRAM domain RG53_RS03090 PF00919 Uncharacterized protein family UPF0004 RG53_RS03090 PF04055 Radical SAM superfamily RG53_RS03095 PF10799 Biofilm formation protein (YliH/bssR) RG53_RS03100 PF07995 Glucose / Sorbosone dehydrogenase RG53_RS03105 PF13417 Glutathione S-transferase, N-terminal domain RG53_RS03105 PF00043 Glutathione S-transferase, C-terminal domain RG53_RS03110 PF00768 D-alanyl-D-alanine carboxypeptidase RG53_RS03110 PF07943 Penicillin-binding protein 5, C-terminal domain RG53_RS03115 PF00455 DeoR C terminal sensor domain RG53_RS03115 PF08220 DeoR-like helix-turn-helix domain RG53_RS03120 PF01569 PAP2 superfamily RG53_RS03125 PF07690 Major Facilitator Superfamily RG53_RS03140 PF07690 Major Facilitator Superfamily RG53_RS03145 PF00440 Bacterial regulatory proteins, tetR family RG53_RS03150 PF02899 Phage integrase, N-terminal SAM-like domain RG53_RS03150 PF00589 Phage integrase family RG53_RS03165 PF07022 Bacteriophage CI repressor helix-turn-helix domain RG53_RS03165 PF16452 Bacteriophage CI repressor C-terminal domain RG53_RS03175 PF06892 Phage regulatory protein CII (CP76) RG53_RS03185 PF17282 Family of unknown function (DUF5347) RG53_RS03195 PF01258 Prokaryotic dksA/traR C4-type zinc finger RG53_RS03200 PF02086 D12 class N6 adenine-specific DNA methyltransferase RG53_RS03205 PF05840 Bacteriophage replication gene A protein (GPA) RG53_RS03215 PF06183 DinI-like family RG53_RS03320 PF02413 Caudovirales tail fibre assembly protein, lambda gpK RG53_RS03325 PF02413 Caudovirales tail fibre assembly protein, lambda gpK RG53_RS03335 PF02796 Helix-turn-helix domain of resolvase RG53_RS03335 PF00239 Resolvase, N terminal domain RG53_RS03340 PF17482 Phage tail sheath C-terminal domain RG53_RS03340 PF04984 Phage tail sheath protein subtilisin-like domain RG53_RS03375 PF04606 Ogr/Delta-like zinc finger RG53_RS03380 PF02080 TrkA-C domain RG53_RS03380 PF06826 Predicted Permease Membrane Region RG53_RS03385 PF11045 Putative inner membrane protein of Enterobacteriaceae RG53_RS03390 PF00462 Glutaredoxin RG53_RS03395 PF07214 Protein of unknown function (DUF1418) RG53_RS03400 PF00881 Nitroreductase family RG53_RS03405 PF08443 RimK-like ATP-grasp domain RG53_RS03405 PF18030 RimK PreATP-grasp domain RG53_RS03410 PF10722 Putative bacterial sensory transduction regulator RG53_RS03420 PF13416 Bacterial extracellular solute-binding protein RG53_RS03425 PF08402 TOBE domain RG53_RS03425 PF00005 ABC transporter RG53_RS03430 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS03435 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS03440 PF10767 Protein of unknown function (DUF2593) RG53_RS03445 PF05958 tRNA (Uracil-5-)-methyltransferase RG53_RS03455 PF00497 Bacterial extracellular solute-binding proteins, family 3 RG53_RS03460 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS03465 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS03470 PF00497 Bacterial extracellular solute-binding proteins, family 3 RG53_RS03475 PF00005 ABC transporter RG53_RS03480 PF12883 Protein of unknown function (DUF3828) RG53_RS03485 PF01906 Putative heavy-metal-binding RG53_RS03490 PF01510 N-acetylmuramoyl-L-alanine amidase RG53_RS03495 PF01370 NAD dependent epimerase/dehydratase family RG53_RS03500 PF11066 Protein of unknown function (DUF2867) RG53_RS03500 PF13460 NAD(P)H-binding RG53_RS03505 PF01212 Beta-eliminating lyase RG53_RS03510 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RG53_RS03510 PF00205 Thiamine pyrophosphate enzyme, central domain RG53_RS03510 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RG53_RS03515 PF00970 Oxidoreductase FAD-binding domain RG53_RS03515 PF00111 2Fe-2S iron-sulfur cluster binding domain RG53_RS03515 PF00175 Oxidoreductase NAD-binding domain RG53_RS03520 PF03063 Prismane/CO dehydrogenase family RG53_RS03525 PF03956 Lysine exporter LysO RG53_RS03530 PF00230 Major intrinsic protein RG53_RS03540 PF11398 Protein of unknown function (DUF2813) RG53_RS03545 PF04393 Protein of unknown function (DUF535) RG53_RS03550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RG53_RS03555 PF00005 ABC transporter RG53_RS03555 PF12704 MacB-like periplasmic core domain RG53_RS03555 PF02687 FtsX-like permease family RG53_RS03560 PF00313 'Cold-shock' DNA-binding domain RG53_RS03565 PF02617 ATP-dependent Clp protease adaptor protein ClpS RG53_RS03570 PF00004 ATPase family associated with various cellular activities (AAA) RG53_RS03570 PF07724 AAA domain (Cdc48 subfamily) RG53_RS03570 PF10431 C-terminal, D2-small domain, of ClpB protein RG53_RS03570 PF02861 Clp amino terminal domain, pathogenicity island component RG53_RS03570 PF17871 AAA lid domain RG53_RS03585 PF01176 Translation initiation factor 1A / IF-1 RG53_RS03595 PF03588 Leucyl/phenylalanyl-tRNA protein transferase RG53_RS03600 PF00664 ABC transporter transmembrane region RG53_RS03600 PF00005 ABC transporter RG53_RS03605 PF00005 ABC transporter RG53_RS03605 PF00664 ABC transporter transmembrane region RG53_RS03610 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG53_RS03620 PF01037 Lrp/AsnC ligand binding domain RG53_RS03625 PF13491 4TM region of DNA translocase FtsK/SpoIIIE RG53_RS03625 PF17854 FtsK alpha domain RG53_RS03625 PF01580 FtsK/SpoIIIE family RG53_RS03625 PF09397 Ftsk gamma domain RG53_RS03630 PF03548 Outer membrane lipoprotein carrier protein LolA RG53_RS03635 PF00004 ATPase family associated with various cellular activities (AAA) RG53_RS03635 PF16193 AAA C-terminal domain RG53_RS03635 PF12002 MgsA AAA+ ATPase C terminal RG53_RS03640 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RG53_RS03640 PF02403 Seryl-tRNA synthetase N-terminal domain RG53_RS03645 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RG53_RS03645 PF00384 Molybdopterin oxidoreductase RG53_RS03645 PF01568 Molydopterin dinucleotide binding domain RG53_RS03650 PF12800 4Fe-4S binding domain RG53_RS03650 PF13247 4Fe-4S dicluster domain RG53_RS03655 PF04976 DMSO reductase anchor subunit (DmsC) RG53_RS03660 PF00857 Isochorismatase family RG53_RS03665 PF07690 Major Facilitator Superfamily RG53_RS03670 PF13520 Amino acid permease RG53_RS03675 PF03466 LysR substrate binding domain RG53_RS03675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG53_RS03680 PF02525 Flavodoxin-like fold RG53_RS03685 PF04055 Radical SAM superfamily RG53_RS03695 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding RG53_RS03695 PF18381 YcaO cyclodehydratase C-terminal domain RG53_RS03700 PF04239 Protein of unknown function (DUF421) RG53_RS03705 PF00266 Aminotransferase class-V RG53_RS03710 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RG53_RS03715 PF01435 Peptidase family M48 RG53_RS03720 PF02224 Cytidylate kinase RG53_RS03725 PF00575 S1 RNA binding domain RG53_RS03730 PF00216 Bacterial DNA-binding protein RG53_RS03735 PF03772 Competence protein RG53_RS03735 PF00753 Metallo-beta-lactamase superfamily RG53_RS03740 PF00005 ABC transporter RG53_RS03740 PF00664 ABC transporter transmembrane region RG53_RS03745 PF02606 Tetraacyldisaccharide-1-P 4'-kinase RG53_RS03750 PF06224 Winged helix DNA-binding domain RG53_RS03755 PF03966 Trm112p-like protein RG53_RS03760 PF02348 Cytidylyltransferase RG53_RS03765 PF01636 Phosphotransferase enzyme family RG53_RS03770 PF02698 DUF218 domain RG53_RS03775 PF13847 Methyltransferase domain RG53_RS03780 PF17193 MukF C-terminal domain RG53_RS03780 PF17192 MukF middle domain RG53_RS03780 PF03882 MukF winged-helix domain RG53_RS03785 PF04288 MukE-like family RG53_RS03790 PF04310 MukB N-terminal RG53_RS03790 PF16330 MukB hinge domain RG53_RS03795 PF03734 L,D-transpeptidase catalytic domain RG53_RS03795 PF01471 Putative peptidoglycan binding domain RG53_RS03805 PF05951 Bacterial protein of unknown function (DUF882) RG53_RS03810 PF00753 Metallo-beta-lactamase superfamily RG53_RS03815 PF02371 Transposase IS116/IS110/IS902 family RG53_RS03815 PF01548 Transposase RG53_RS03820 PF00155 Aminotransferase class I and II RG53_RS03830 PF00267 Gram-negative porin RG53_RS03835 PF01336 OB-fold nucleic acid binding domain RG53_RS03835 PF00152 tRNA synthetases class II (D, K and N) RG53_RS03840 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family RG53_RS03840 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain RG53_RS03845 PF11940 Domain of unknown function (DUF3458) Ig-like fold RG53_RS03845 PF01433 Peptidase family M1 domain RG53_RS03845 PF17432 Domain of unknown function (DUF3458_C) ARM repeats RG53_RS03855 PF00005 ABC transporter RG53_RS03860 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS03865 PF00296 Luciferase-like monooxygenase RG53_RS03870 PF09084 NMT1/THI5 like RG53_RS03875 PF03358 NADPH-dependent FMN reductase RG53_RS03885 PF00419 Fimbrial protein RG53_RS03890 PF02753 Pili assembly chaperone PapD, C-terminal domain RG53_RS03890 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RG53_RS03895 PF13954 PapC N-terminal domain RG53_RS03895 PF00577 Outer membrane usher protein RG53_RS03895 PF13953 PapC C-terminal domain RG53_RS03900 PF00419 Fimbrial protein RG53_RS03905 PF00419 Fimbrial protein RG53_RS03910 PF00419 Fimbrial protein RG53_RS03915 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RG53_RS03915 PF02753 Pili assembly chaperone PapD, C-terminal domain RG53_RS03920 PF01180 Dihydroorotate dehydrogenase RG53_RS03925 PF07126 Cell-division protein ZapC RG53_RS03930 PF03473 MOSC domain RG53_RS03930 PF00111 2Fe-2S iron-sulfur cluster binding domain RG53_RS03930 PF03476 MOSC N-terminal beta barrel domain RG53_RS03935 PF02926 THUMP domain RG53_RS03935 PF01170 Putative RNA methylase family UPF0020 RG53_RS03935 PF10672 S-adenosylmethionine-dependent methyltransferase RG53_RS03940 PF12848 ABC transporter RG53_RS03940 PF00005 ABC transporter RG53_RS03940 PF16326 ABC transporter C-terminal domain RG53_RS03945 PF04403 Paraquat-inducible protein A RG53_RS03950 PF02470 MlaD protein RG53_RS03955 PF03886 ABC-type transport auxiliary lipoprotein component RG53_RS03960 PF04957 Ribosome modulation factor RG53_RS03965 PF07977 FabA-like domain RG53_RS03970 PF05362 Lon protease (S16) C-terminal proteolytic domain RG53_RS03970 PF13654 AAA domain RG53_RS03975 PF06303 MatP N-terminal domain RG53_RS03975 PF17414 MatP C-terminal ribbon-helix-helix domain RG53_RS03980 PF01389 OmpA-like transmembrane domain RG53_RS03980 PF00691 OmpA family RG53_RS03990 PF03846 Cell division inhibitor SulA RG53_RS03995 PF04994 TfoX C-terminal domain RG53_RS03995 PF04993 TfoX N-terminal domain RG53_RS04000 PF12805 FUSC-like inner membrane protein yccS RG53_RS04005 PF03733 Inner membrane component domain RG53_RS04010 PF13361 UvrD-like helicase C-terminal domain RG53_RS04010 PF00580 UvrD/REP helicase N-terminal domain RG53_RS04010 PF12462 DNA helicase IV / RNA helicase N terminal RG53_RS04015 PF02142 MGS-like domain RG53_RS04020 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) RG53_RS04030 PF13380 CoA binding domain RG53_RS04035 PF08755 Hemimethylated DNA-binding protein YccV like RG53_RS04040 PF17785 PUA-like domain RG53_RS04040 PF10672 S-adenosylmethionine-dependent methyltransferase RG53_RS04045 PF00708 Acylphosphatase RG53_RS04050 PF04358 DsrC like protein RG53_RS04055 PF01027 Inhibitor of apoptosis-promoting Bax1 RG53_RS04065 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal RG53_RS04065 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RG53_RS04070 PF00374 Nickel-dependent hydrogenase RG53_RS04075 PF01292 Prokaryotic cytochrome b561 RG53_RS04080 PF01750 Hydrogenase maturation protease RG53_RS04085 PF07449 Hydrogenase-1 expression protein HyaE RG53_RS04090 PF04809 HupH hydrogenase expression protein, C-terminal conserved region RG53_RS04095 PF01654 Cytochrome bd terminal oxidase subunit I RG53_RS04100 PF02322 Cytochrome bd terminal oxidase subunit II RG53_RS04105 PF08173 Membrane bound YbgT-like protein RG53_RS04110 PF00328 Histidine phosphatase superfamily (branch 2) RG53_RS04115 PF13807 G-rich domain on putative tyrosine kinase RG53_RS04115 PF02706 Chain length determinant protein RG53_RS04115 PF13614 AAA domain RG53_RS04120 PF01451 Low molecular weight phosphotyrosine protein phosphatase RG53_RS04125 PF10531 SLBB domain RG53_RS04125 PF02563 Polysaccharide biosynthesis/export protein RG53_RS04125 PF18412 Outer-membrane lipoprotein Wza C-terminal domain RG53_RS04130 PF06082 Exopolysaccharide biosynthesis protein YbjH RG53_RS04135 PF06251 Capsule biosynthesis GfcC RG53_RS04140 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF RG53_RS04150 PF00313 'Cold-shock' DNA-binding domain RG53_RS04155 PF00313 'Cold-shock' DNA-binding domain RG53_RS04165 PF15939 Putative antitoxin of bacterial toxin-antitoxin system RG53_RS04170 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system RG53_RS04175 PF12801 4Fe-4S binding domain RG53_RS04180 PF00072 Response regulator receiver domain RG53_RS04180 PF00672 HAMP domain RG53_RS04180 PF00512 His Kinase A (phospho-acceptor) domain RG53_RS04180 PF01627 Hpt domain RG53_RS04180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG53_RS04185 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RG53_RS04190 PF00486 Transcriptional regulatory protein, C terminal RG53_RS04190 PF00072 Response regulator receiver domain RG53_RS04195 PF03264 NapC/NirT cytochrome c family, N-terminal region RG53_RS04200 PF01568 Molydopterin dinucleotide binding domain RG53_RS04200 PF18364 Molybdopterin oxidoreductase N-terminal domain RG53_RS04200 PF00384 Molybdopterin oxidoreductase RG53_RS04205 PF02613 Nitrate reductase delta subunit RG53_RS04215 PF00226 DnaJ domain RG53_RS04215 PF01556 DnaJ C terminal domain RG53_RS04225 PF00328 Histidine phosphatase superfamily (branch 2) RG53_RS04230 PF13993 YccJ-like protein RG53_RS04235 PF03358 NADPH-dependent FMN reductase RG53_RS04245 PF10685 Stress-induced bacterial acidophilic repeat motif RG53_RS04250 PF00860 Permease family RG53_RS04255 PF01613 Flavin reductase like domain RG53_RS04260 PF00881 Nitroreductase family RG53_RS04265 PF12697 Alpha/beta hydrolase family RG53_RS04270 PF01042 Endoribonuclease L-PSP RG53_RS04275 PF00857 Isochorismatase family RG53_RS04280 PF00296 Luciferase-like monooxygenase RG53_RS04285 PF00440 Bacterial regulatory proteins, tetR family RG53_RS04285 PF08362 YcdC-like protein, C-terminal region RG53_RS04290 PF18327 Proline utilization A proline dehydrogenase N-terminal domain RG53_RS04290 PF14850 DNA-binding domain of Proline dehydrogenase RG53_RS04290 PF01619 Proline dehydrogenase RG53_RS04290 PF00171 Aldehyde dehydrogenase family RG53_RS04305 PF00474 Sodium:solute symporter family RG53_RS04315 PF03239 Iron permease FTR1 family RG53_RS04320 PF09375 Imelysin RG53_RS04320 PF13473 Cupredoxin-like domain RG53_RS04325 PF04261 Dyp-type peroxidase family RG53_RS04335 PF02562 PhoH-like protein RG53_RS04340 PF13994 PgaD-like protein RG53_RS04345 PF00535 Glycosyl transferase family 2 RG53_RS04350 PF01522 Polysaccharide deacetylase RG53_RS04350 PF14883 Hypothetical glycosyl hydrolase family 13 RG53_RS04360 PF17158 Membrane-associated sensor, integral membrane domain RG53_RS04360 PF00990 Diguanylate cyclase, GGDEF domain RG53_RS04365 PF13333 Integrase core domain RG53_RS04365 PF00665 Integrase core domain RG53_RS04365 PF13276 HTH-like domain RG53_RS04370 PF01527 Transposase RG53_RS04390 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RG53_RS04395 PF02811 PHP domain RG53_RS04400 PF02613 Nitrate reductase delta subunit RG53_RS04405 PF06496 Protein of unknown function (DUF1097) RG53_RS04410 PF03783 Curli production assembly/transport component CsgG RG53_RS04415 PF10614 Type VIII secretion system (T8SS), CsgF protein RG53_RS04420 PF10627 Curli assembly protein CsgE RG53_RS04425 PF00196 Bacterial regulatory proteins, luxR family RG53_RS04440 PF07012 Curlin associated repeat RG53_RS04445 PF07012 Curlin associated repeat RG53_RS04450 PF10610 Thin aggregative fimbriae synthesis protein RG53_RS04460 PF01661 Macro domain RG53_RS04465 PF13091 PLD-like domain RG53_RS04470 PF01757 Acyltransferase family RG53_RS04475 PF04349 Periplasmic glucan biosynthesis protein, MdoG RG53_RS04480 PF00535 Glycosyl transferase family 2 RG53_RS04485 PF07119 Protein of unknown function (DUF1375) RG53_RS04490 PF13984 MsyB protein RG53_RS04500 PF07690 Major Facilitator Superfamily RG53_RS04505 PF03279 Bacterial lipid A biosynthesis acyltransferase RG53_RS04510 PF12368 Rhodanase C-terminal RG53_RS04510 PF00581 Rhodanese-like domain RG53_RS04510 PF17773 UPF0176 acylphosphatase like domain RG53_RS04515 PF04264 YceI-like domain RG53_RS04520 PF01292 Prokaryotic cytochrome b561 RG53_RS04530 PF10968 Protein of unknown function (DUF2770) RG53_RS04535 PF01266 FAD dependent oxidoreductase RG53_RS04540 PF13991 BssS protein family RG53_RS04545 PF06183 DinI-like family RG53_RS04550 PF01979 Amidohydrolase family RG53_RS04555 PF07273 Protein of unknown function (DUF1439) RG53_RS04560 PF13417 Glutathione S-transferase, N-terminal domain RG53_RS04560 PF04399 Glutaredoxin 2, C terminal domain RG53_RS04565 PF07690 Major Facilitator Superfamily RG53_RS04570 PF13302 Acetyltransferase (GNAT) domain RG53_RS04575 PF04337 Protein of unknown function, DUF480 RG53_RS04580 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RG53_RS04585 PF03023 Lipid II flippase MurJ RG53_RS04590 PF05130 FlgN protein RG53_RS04595 PF04316 Anti-sigma-28 factor, FlgM RG53_RS04600 PF13144 Chaperone for flagella basal body P-ring formation RG53_RS04605 PF00460 Flagella basal body rod protein RG53_RS04610 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RG53_RS04610 PF00460 Flagella basal body rod protein RG53_RS04615 PF03963 Flagellar hook capping protein - N-terminal region RG53_RS04615 PF13860 FlgD Ig-like domain RG53_RS04615 PF13861 FlgD Tudor-like domain RG53_RS04620 PF07559 Flagellar basal body protein FlaE RG53_RS04620 PF00460 Flagella basal body rod protein RG53_RS04620 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RG53_RS04625 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RG53_RS04625 PF00460 Flagella basal body rod protein RG53_RS04630 PF00460 Flagella basal body rod protein RG53_RS04630 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RG53_RS04635 PF02107 Flagellar L-ring protein RG53_RS04640 PF02119 Flagellar P-ring protein RG53_RS04645 PF10135 Rod binding protein RG53_RS04645 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase RG53_RS04650 PF00460 Flagella basal body rod protein RG53_RS04650 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RG53_RS04655 PF00669 Bacterial flagellin N-terminal helical region RG53_RS04660 PF10150 Ribonuclease E/G family RG53_RS04660 PF12111 Polyribonucleotide phosphorylase C terminal RG53_RS04660 PF00575 S1 RNA binding domain RG53_RS04670 PF00849 RNA pseudouridylate synthase RG53_RS04670 PF01479 S4 domain RG53_RS04675 PF02545 Maf-like protein RG53_RS04680 PF02620 Large ribosomal RNA subunit accumulation protein YceD RG53_RS04685 PF01783 Ribosomal L32p protein family RG53_RS04690 PF02504 Fatty acid synthesis protein RG53_RS04695 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RG53_RS04695 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RG53_RS04700 PF00698 Acyl transferase domain RG53_RS04710 PF00550 Phosphopantetheine attachment site RG53_RS04715 PF00109 Beta-ketoacyl synthase, N-terminal domain RG53_RS04715 PF02801 Beta-ketoacyl synthase, C-terminal domain RG53_RS04720 PF01063 Amino-transferase class IV RG53_RS04725 PF02618 YceG-like family RG53_RS04730 PF02223 Thymidylate kinase RG53_RS04735 PF09115 DNA polymerase III, delta subunit, C terminal RG53_RS04740 PF01026 TatD related DNase RG53_RS04745 PF00367 phosphotransferase system, EIIB RG53_RS04745 PF02378 Phosphotransferase system, EIIC RG53_RS04750 PF00593 TonB dependent receptor RG53_RS04750 PF07715 TonB-dependent Receptor Plug Domain RG53_RS04755 PF01230 HIT domain RG53_RS04760 PF07233 Protein of unknown function (DUF1425) RG53_RS04765 PF13036 Peptidoglycan-synthase activator LpoB RG53_RS04770 PF01636 Phosphotransferase enzyme family RG53_RS04775 PF00933 Glycosyl hydrolase family 3 N terminal domain RG53_RS04780 PF05728 Uncharacterised protein family (UPF0227) RG53_RS04790 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG53_RS04795 PF05433 Glycine zipper 2TM domain RG53_RS04800 PF00440 Bacterial regulatory proteins, tetR family RG53_RS04805 PF07338 Protein of unknown function (DUF1471) RG53_RS04810 PF01476 LysM domain RG53_RS04810 PF17969 L,D-transpeptidase C-terminal domain RG53_RS04810 PF03734 L,D-transpeptidase catalytic domain RG53_RS04815 PF00271 Helicase conserved C-terminal domain RG53_RS04815 PF00270 DEAD/DEAH box helicase RG53_RS04815 PF02559 CarD-like/TRCF domain RG53_RS04815 PF03461 TRCF domain RG53_RS04815 PF17757 UvrB interaction domain RG53_RS04820 PF01757 Acyltransferase family RG53_RS04825 PF12704 MacB-like periplasmic core domain RG53_RS04825 PF02687 FtsX-like permease family RG53_RS04830 PF00005 ABC transporter RG53_RS04835 PF02687 FtsX-like permease family RG53_RS04835 PF12704 MacB-like periplasmic core domain RG53_RS04840 PF00480 ROK family RG53_RS04845 PF02146 Sir2 family RG53_RS04850 PF04536 TPM domain RG53_RS04855 PF12158 Protein of unknown function (DUF3592) RG53_RS04860 PF13416 Bacterial extracellular solute-binding protein RG53_RS04865 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS04870 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS04875 PF08402 TOBE domain RG53_RS04875 PF00005 ABC transporter RG53_RS04885 PF01546 Peptidase family M20/M25/M40 RG53_RS04885 PF07687 Peptidase dimerisation domain RG53_RS04890 PF08007 Cupin superfamily protein RG53_RS04895 PF08918 PhoQ Sensor RG53_RS04895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG53_RS04900 PF00072 Response regulator receiver domain RG53_RS04900 PF00486 Transcriptional regulatory protein, C terminal RG53_RS04905 PF00206 Lyase RG53_RS04905 PF08328 Adenylosuccinate lyase C-terminal RG53_RS04910 PF04356 Protein of unknown function (DUF489) RG53_RS04920 PF00293 NUDIX domain RG53_RS04925 PF00849 RNA pseudouridylate synthase RG53_RS04930 PF00180 Isocitrate/isopropylmalate dehydrogenase RG53_RS04945 PF07166 Protein of unknown function (DUF1398) RG53_RS04950 PF13411 MerR HTH family regulatory protein RG53_RS04955 PF00563 EAL domain RG53_RS04955 PF04940 Sensors of blue-light using FAD RG53_RS04960 PF10798 Biofilm development protein YmgB/AriR RG53_RS04970 PF10798 Biofilm development protein YmgB/AriR RG53_RS04980 PF12792 CSS motif domain associated with EAL RG53_RS04980 PF00563 EAL domain RG53_RS04995 PF03797 Autotransporter beta-domain RG53_RS05000 PF16456 YmgD protein RG53_RS05005 PF13436 Glycine-zipper domain RG53_RS05025 PF03797 Autotransporter beta-domain RG53_RS05035 PF03776 Septum formation topological specificity factor MinE RG53_RS05040 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RG53_RS05045 PF05209 Septum formation inhibitor MinC, N-terminal domain RG53_RS05045 PF03775 Septum formation inhibitor MinC, C-terminal domain RG53_RS05055 PF05666 Fels-1 Prophage Protein-like RG53_RS05060 PF04151 Bacterial pre-peptidase C-terminal domain RG53_RS05065 PF05166 YcgL domain RG53_RS05070 PF01557 Fumarylacetoacetate (FAA) hydrolase family RG53_RS05075 PF03692 Putative zinc- or iron-chelating domain RG53_RS05080 PF06109 Haemolysin E (HlyE) RG53_RS05085 PF06109 Haemolysin E (HlyE) RG53_RS05090 PF00717 Peptidase S24-like RG53_RS05095 PF13438 Domain of unknown function (DUF4113) RG53_RS05095 PF11799 impB/mucB/samB family C-terminal domain RG53_RS05095 PF00817 impB/mucB/samB family RG53_RS05095 PF11798 IMS family HHH motif RG53_RS05100 PF02600 Disulfide bond formation protein DsbB RG53_RS05105 PF06450 Bacterial Na+/H+ antiporter B (NhaB) RG53_RS05110 PF00392 Bacterial regulatory proteins, gntR family RG53_RS05110 PF07840 FadR C-terminal domain RG53_RS05115 PF04293 SpoVR like protein RG53_RS05120 PF01266 FAD dependent oxidoreductase RG53_RS05125 PF01168 Alanine racemase, N-terminal domain RG53_RS05125 PF00842 Alanine racemase, C-terminal domain RG53_RS05130 PF00999 Sodium/hydrogen exchanger family RG53_RS05130 PF03471 Transporter associated domain RG53_RS05130 PF02080 TrkA-C domain RG53_RS05135 PF02016 LD-carboxypeptidase N-terminal domain RG53_RS05135 PF17676 LD-carboxypeptidase C-terminal domain RG53_RS05145 PF01464 Transglycosylase SLT domain RG53_RS05150 PF07238 PilZ domain RG53_RS05150 PF07317 Flagellar regulator YcgR RG53_RS05155 PF04226 Transglycosylase associated protein RG53_RS05165 PF01204 Trehalase RG53_RS05175 PF05524 PEP-utilising enzyme, N-terminal RG53_RS05175 PF03610 PTS system fructose IIA component RG53_RS05175 PF00381 PTS HPr component phosphorylation site RG53_RS05175 PF00391 PEP-utilising enzyme, mobile domain RG53_RS05180 PF02734 DAK2 domain RG53_RS05185 PF02733 Dak1 domain RG53_RS05190 PF00989 PAS fold RG53_RS05190 PF02954 Bacterial regulatory protein, Fis family RG53_RS05190 PF00158 Sigma-54 interaction domain RG53_RS05195 PF03212 Pertactin RG53_RS05195 PF03797 Autotransporter beta-domain RG53_RS05215 PF01926 50S ribosome-binding GTPase RG53_RS05215 PF06071 Protein of unknown function (DUF933) RG53_RS05220 PF01195 Peptidyl-tRNA hydrolase RG53_RS05225 PF10762 Protein of unknown function (DUF2583) RG53_RS05230 PF00916 Sulfate permease family RG53_RS05230 PF01740 STAS domain RG53_RS05235 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase RG53_RS05235 PF14572 Phosphoribosyl synthetase-associated domain RG53_RS05240 PF08544 GHMP kinases C terminal RG53_RS05240 PF00288 GHMP kinases N terminal domain RG53_RS05245 PF03550 Outer membrane lipoprotein LolB RG53_RS05250 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain RG53_RS05250 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain RG53_RS05250 PF01488 Shikimate / quinate 5-dehydrogenase RG53_RS05255 PF00472 RF-1 domain RG53_RS05255 PF03462 PCRF domain RG53_RS05260 PF17827 PrmC N-terminal domain RG53_RS05260 PF13847 Methyltransferase domain RG53_RS05265 PF04247 Invasion gene expression up-regulator, SirB RG53_RS05270 PF13369 Transglutaminase-like superfamily RG53_RS05275 PF00793 DAHP synthetase I family RG53_RS05280 PF13940 Toxin Ldr, type I toxin-antitoxin system RG53_RS05290 PF13940 Toxin Ldr, type I toxin-antitoxin system RG53_RS05300 PF13940 Toxin Ldr, type I toxin-antitoxin system RG53_RS05310 PF01699 Sodium/calcium exchanger protein RG53_RS05315 PF06150 ChaB RG53_RS05320 PF04752 ChaC-like protein RG53_RS05325 PF02635 DsrE/DsrF-like family RG53_RS05330 PF11924 Inverse autotransporter, beta-domain RG53_RS05335 PF00072 Response regulator receiver domain RG53_RS05335 PF00196 Bacterial regulatory proteins, luxR family RG53_RS05340 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term RG53_RS05340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG53_RS05340 PF00672 HAMP domain RG53_RS05340 PF07730 Histidine kinase RG53_RS05350 PF07690 Major Facilitator Superfamily RG53_RS05355 PF01568 Molydopterin dinucleotide binding domain RG53_RS05355 PF14710 Respiratory nitrate reductase alpha N-terminal RG53_RS05355 PF00384 Molybdopterin oxidoreductase RG53_RS05360 PF14711 Respiratory nitrate reductase beta C-terminal RG53_RS05360 PF13247 4Fe-4S dicluster domain RG53_RS05365 PF02613 Nitrate reductase delta subunit RG53_RS05370 PF02665 Nitrate reductase gamma subunit RG53_RS05390 PF00551 Formyl transferase RG53_RS05390 PF01842 ACT domain RG53_RS05395 PF02810 SEC-C motif RG53_RS05400 PF01734 Patatin-like phospholipase RG53_RS05405 PF00072 Response regulator receiver domain RG53_RS05410 PF00483 Nucleotidyl transferase RG53_RS05415 PF00816 H-NS histone family RG53_RS05420 PF00265 Thymidine kinase RG53_RS05425 PF00465 Iron-containing alcohol dehydrogenase RG53_RS05425 PF00171 Aldehyde dehydrogenase family RG53_RS05430 PF01914 MarC family integral membrane protein RG53_RS05440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RG53_RS05445 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS05450 PF12911 N-terminal TM domain of oligopeptide transport permease C RG53_RS05450 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS05455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RG53_RS05455 PF00005 ABC transporter RG53_RS05460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RG53_RS05460 PF00005 ABC transporter RG53_RS05465 PF04269 Protein of unknown function, DUF440 RG53_RS05470 PF13396 Phospholipase_D-nuclease N-terminal RG53_RS05470 PF13091 PLD-like domain RG53_RS05480 PF07885 Ion channel RG53_RS05480 PF02254 TrkA-N domain RG53_RS05485 PF03795 YCII-related domain RG53_RS05490 PF03544 Gram-negative bacterial TonB protein C-terminal RG53_RS05495 PF03061 Thioesterase superfamily RG53_RS05500 PF04279 Intracellular septation protein A RG53_RS05510 PF03922 OmpW family RG53_RS05515 PF05974 Domain of unknown function (DUF892) RG53_RS05520 PF05974 Domain of unknown function (DUF892) RG53_RS05525 PF10685 Stress-induced bacterial acidophilic repeat motif RG53_RS05530 PF00290 Tryptophan synthase alpha chain RG53_RS05535 PF00291 Pyridoxal-phosphate dependent enzyme RG53_RS05540 PF00218 Indole-3-glycerol phosphate synthase RG53_RS05540 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase RG53_RS05545 PF02885 Glycosyl transferase family, helical bundle domain RG53_RS05545 PF00117 Glutamine amidotransferase class-I RG53_RS05545 PF00591 Glycosyl transferase family, a/b domain RG53_RS05550 PF04715 Anthranilate synthase component I, N terminal region RG53_RS05550 PF00425 chorismate binding enzyme RG53_RS05555 PF08255 Trp-operon Leader Peptide RG53_RS05560 PF02811 PHP domain RG53_RS05565 PF01300 Telomere recombination RG53_RS05580 PF02810 SEC-C motif RG53_RS05580 PF07517 SecA DEAD-like domain RG53_RS05580 PF01043 SecA preprotein cross-linking domain RG53_RS05580 PF07516 SecA Wing and Scaffold domain RG53_RS05585 PF02796 Helix-turn-helix domain of resolvase RG53_RS05585 PF00239 Resolvase, N terminal domain RG53_RS05600 PF01479 S4 domain RG53_RS05600 PF00849 RNA pseudouridylate synthase RG53_RS05605 PF12557 Cob(I)alamin adenosyltransferase N terminal RG53_RS05605 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP RG53_RS05610 PF00106 short chain dehydrogenase RG53_RS05620 PF01343 Peptidase family S49 RG53_RS05620 PF08496 Peptidase family S49 N-terminal RG53_RS05625 PF10692 Protein of unknown function (DUF2498) RG53_RS05630 PF08272 Topoisomerase I zinc-ribbon-like RG53_RS05630 PF01131 DNA topoisomerase RG53_RS05630 PF01751 Toprim domain RG53_RS05630 PF01396 Topoisomerase DNA binding C4 zinc finger RG53_RS05640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG53_RS05640 PF03466 LysR substrate binding domain RG53_RS05660 PF00694 Aconitase C-terminal domain RG53_RS05660 PF00330 Aconitase family (aconitate hydratase) RG53_RS05665 PF00925 GTP cyclohydrolase II RG53_RS05670 PF01569 PAP2 superfamily RG53_RS05675 PF06305 Lipopolysaccharide assembly protein A domain RG53_RS05680 PF18073 Rubredoxin metal binding domain RG53_RS05685 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RG53_RS05690 PF01253 Translation initiation factor SUI1 RG53_RS05695 PF05433 Glycine zipper 2TM domain RG53_RS05700 PF08220 DeoR-like helix-turn-helix domain RG53_RS05700 PF00455 DeoR C terminal sensor domain RG53_RS05710 PF13426 PAS domain RG53_RS05710 PF00990 Diguanylate cyclase, GGDEF domain RG53_RS05710 PF00563 EAL domain RG53_RS05720 PF08206 Ribonuclease B OB domain RG53_RS05720 PF17876 Cold shock domain RG53_RS05720 PF00773 RNB domain RG53_RS05720 PF00575 S1 RNA binding domain RG53_RS05735 PF04480 Protein of unknown function (DUF559) RG53_RS05740 PF00005 ABC transporter RG53_RS05745 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RG53_RS05745 PF00005 ABC transporter RG53_RS05750 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS05750 PF12911 N-terminal TM domain of oligopeptide transport permease C RG53_RS05755 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS05760 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RG53_RS05770 PF10820 Protein of unknown function (DUF2543) RG53_RS05775 PF00324 Amino acid permease RG53_RS05780 PF00120 Glutamine synthetase, catalytic domain RG53_RS05785 PF07722 Peptidase C26 RG53_RS05790 PF01381 Helix-turn-helix RG53_RS05790 PF07883 Cupin domain RG53_RS05795 PF00171 Aldehyde dehydrogenase family RG53_RS05800 PF01266 FAD dependent oxidoreductase RG53_RS05805 PF00202 Aminotransferase class-III RG53_RS05810 PF02954 Bacterial regulatory protein, Fis family RG53_RS05810 PF00158 Sigma-54 interaction domain RG53_RS05815 PF04012 PspA/IM30 family RG53_RS05820 PF06667 Phage shock protein B RG53_RS05825 PF04024 PspC domain RG53_RS05830 PF09584 Phage shock protein PspD (Phageshock_PspD) RG53_RS05835 PF00581 Rhodanese-like domain RG53_RS05840 PF00128 Alpha amylase, catalytic domain RG53_RS05845 PF01547 Bacterial extracellular solute-binding protein RG53_RS05850 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS05855 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS05860 PF00107 Zinc-binding dehydrogenase RG53_RS05870 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RG53_RS05870 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RG53_RS05875 PF03633 Glycosyl hydrolase family 65, C-terminal domain RG53_RS05875 PF03632 Glycosyl hydrolase family 65 central catalytic domain RG53_RS05875 PF03636 Glycosyl hydrolase family 65, N-terminal domain RG53_RS05880 PF13419 Haloacid dehalogenase-like hydrolase RG53_RS05885 PF03459 TOBE domain RG53_RS05885 PF17912 MalK OB fold domain RG53_RS05885 PF00005 ABC transporter RG53_RS05890 PF09381 Outer membrane protein G (OmpG) RG53_RS05895 PF00356 Bacterial regulatory proteins, lacI family RG53_RS05895 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RG53_RS05900 PF04317 YcjX-like family, DUF463 RG53_RS05905 PF05128 Domain of unknown function (DUF697) RG53_RS05910 PF00158 Sigma-54 interaction domain RG53_RS05910 PF13188 PAS domain RG53_RS05910 PF18024 Helix-turn-helix domain RG53_RS05915 PF08534 Redoxin RG53_RS05920 PF13378 Enolase C-terminal domain-like RG53_RS05920 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RG53_RS05925 PF00246 Zinc carboxypeptidase RG53_RS05935 PF12146 Serine aminopeptidase, S33 RG53_RS05940 PF03466 LysR substrate binding domain RG53_RS05940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG53_RS05945 PF02677 Epoxyqueuosine reductase QueH RG53_RS05950 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RG53_RS05955 PF00924 Mechanosensitive ion channel RG53_RS05960 PF10749 Protein of unknown function (DUF2534) RG53_RS05965 PF00582 Universal stress protein family RG53_RS05970 PF00027 Cyclic nucleotide-binding domain RG53_RS05970 PF00325 Bacterial regulatory proteins, crp family RG53_RS05975 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RG53_RS05975 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RG53_RS05980 PF03806 AbgT putative transporter family RG53_RS05990 PF01546 Peptidase family M20/M25/M40 RG53_RS05995 PF07687 Peptidase dimerisation domain RG53_RS05995 PF01546 Peptidase family M20/M25/M40 RG53_RS06000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG53_RS06000 PF03466 LysR substrate binding domain RG53_RS06005 PF01713 Smr domain RG53_RS06010 PF00990 Diguanylate cyclase, GGDEF domain RG53_RS06010 PF08448 PAS fold RG53_RS06015 PF01544 CorA-like Mg2+ transporter protein RG53_RS06025 PF00271 Helicase conserved C-terminal domain RG53_RS06025 PF00270 DEAD/DEAH box helicase RG53_RS06025 PF03880 DbpA RNA binding domain RG53_RS06030 PF01171 PP-loop family RG53_RS06035 PF00582 Universal stress protein family RG53_RS06040 PF00267 Gram-negative porin RG53_RS06045 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg RG53_RS06045 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II RG53_RS06045 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase RG53_RS06045 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RG53_RS06045 PF10371 Domain of unknown function RG53_RS06050 PF03891 Domain of unknown function (DUF333) RG53_RS06055 PF03724 META domain RG53_RS06060 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RG53_RS06060 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RG53_RS06065 PF11739 Dicarboxylate transport RG53_RS06070 PF13617 YnbE-like lipoprotein RG53_RS06075 PF07027 Protein of unknown function (DUF1318) RG53_RS06080 PF14525 AraC-binding-like domain RG53_RS06080 PF12833 Helix-turn-helix domain RG53_RS06085 PF00171 Aldehyde dehydrogenase family RG53_RS06090 PF02728 Copper amine oxidase, N3 domain RG53_RS06090 PF01179 Copper amine oxidase, enzyme domain RG53_RS06090 PF07833 Copper amine oxidase N-terminal domain RG53_RS06090 PF02727 Copper amine oxidase, N2 domain RG53_RS06095 PF01575 MaoC like domain RG53_RS06095 PF00171 Aldehyde dehydrogenase family RG53_RS06100 PF05138 Phenylacetic acid catabolic protein RG53_RS06105 PF06243 Phenylacetic acid degradation B RG53_RS06110 PF05138 Phenylacetic acid catabolic protein RG53_RS06115 PF01883 Iron-sulfur cluster assembly protein RG53_RS06120 PF00175 Oxidoreductase NAD-binding domain RG53_RS06120 PF00111 2Fe-2S iron-sulfur cluster binding domain RG53_RS06120 PF00970 Oxidoreductase FAD-binding domain RG53_RS06125 PF00378 Enoyl-CoA hydratase/isomerase RG53_RS06130 PF00378 Enoyl-CoA hydratase/isomerase RG53_RS06135 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain RG53_RS06135 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RG53_RS06135 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RG53_RS06140 PF03061 Thioesterase superfamily RG53_RS06145 PF00108 Thiolase, N-terminal domain RG53_RS06145 PF02803 Thiolase, C-terminal domain RG53_RS06150 PF00501 AMP-binding enzyme RG53_RS06150 PF14535 AMP-binding enzyme C-terminal domain RG53_RS06155 PF08223 PaaX-like protein C-terminal domain RG53_RS06155 PF07848 PaaX-like protein RG53_RS06160 PF00132 Bacterial transferase hexapeptide (six repeats) RG53_RS06165 PF00248 Aldo/keto reductase family RG53_RS06170 PF10971 Protein of unknown function (DUF2773) RG53_RS06175 PF01066 CDP-alcohol phosphatidyltransferase RG53_RS06185 PF12146 Serine aminopeptidase, S33 RG53_RS06185 PF12147 Putative methyltransferase RG53_RS06190 PF00782 Dual specificity phosphatase, catalytic domain RG53_RS06195 PF02525 Flavodoxin-like fold RG53_RS06200 PF11898 Domain of unknown function (DUF3418) RG53_RS06200 PF04408 Helicase associated domain (HA2) RG53_RS06200 PF00271 Helicase conserved C-terminal domain RG53_RS06200 PF00270 DEAD/DEAH box helicase RG53_RS06200 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold RG53_RS06205 PF02698 DUF218 domain RG53_RS06210 PF00171 Aldehyde dehydrogenase family RG53_RS06215 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RG53_RS06215 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RG53_RS06220 PF01292 Prokaryotic cytochrome b561 RG53_RS06230 PF01848 Hok/gef family RG53_RS06235 PF02203 Tar ligand binding domain homologue RG53_RS06235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RG53_RS06235 PF00672 HAMP domain RG53_RS06240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG53_RS06240 PF03466 LysR substrate binding domain RG53_RS06245 PF07063 Domain of unknown function (DUF1338) RG53_RS06255 PF04349 Periplasmic glucan biosynthesis protein, MdoG RG53_RS06265 PF04325 Protein of unknown function (DUF465) RG53_RS06270 PF13302 Acetyltransferase (GNAT) domain RG53_RS06275 PF18836 Beta solenoid repeat from YDCK RG53_RS06280 PF03595 Voltage-dependent anion channel RG53_RS06285 PF03848 Tellurite resistance protein TehB RG53_RS06290 PF11769 Protein of unknown function (DUF3313) RG53_RS06300 PF12323 Helix-turn-helix domain RG53_RS06300 PF07282 Putative transposase DNA-binding domain RG53_RS06300 PF01385 Probable transposase RG53_RS06305 PF03594 Benzoate membrane transport protein RG53_RS06310 PF01381 Helix-turn-helix RG53_RS06310 PF07883 Cupin domain RG53_RS06315 PF12392 Collagenase RG53_RS06315 PF01136 Peptidase family U32 RG53_RS06320 PF10829 Protein of unknown function (DUF2554) RG53_RS06330 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system RG53_RS06330 PF01381 Helix-turn-helix RG53_RS06335 PF00155 Aminotransferase class I and II RG53_RS06335 PF00392 Bacterial regulatory proteins, gntR family RG53_RS06340 PF13416 Bacterial extracellular solute-binding protein RG53_RS06345 PF08402 TOBE domain RG53_RS06345 PF00005 ABC transporter RG53_RS06350 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS06355 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS06360 PF00171 Aldehyde dehydrogenase family RG53_RS06375 PF10753 Toxin GhoT_OrtT RG53_RS06380 PF10735 Protein of unknown function (DUF2526) RG53_RS06385 PF04657 Putative inner membrane exporter, YdcZ RG53_RS06390 PF00583 Acetyltransferase (GNAT) family RG53_RS06400 PF00107 Zinc-binding dehydrogenase RG53_RS06400 PF16884 N-terminal domain of oxidoreductase RG53_RS06405 PF00392 Bacterial regulatory proteins, gntR family RG53_RS06405 PF07729 FCD domain RG53_RS06410 PF00593 TonB dependent receptor RG53_RS06410 PF07715 TonB-dependent Receptor Plug Domain RG53_RS06430 PF00324 Amino acid permease RG53_RS06435 PF13417 Glutathione S-transferase, N-terminal domain RG53_RS06440 PF17520 Family of unknown function (DUF5445) RG53_RS06445 PF04717 Type VI secretion system, phage-baseplate injector RG53_RS06470 PF01609 Transposase DDE domain RG53_RS06470 PF13808 DDE_Tnp_1-associated RG53_RS06490 PF03527 RHS protein RG53_RS06490 PF14220 Domain of unknown function (DUF4329) RG53_RS06490 PF05593 RHS Repeat RG53_RS06500 PF13808 DDE_Tnp_1-associated RG53_RS06500 PF01609 Transposase DDE domain RG53_RS06505 PF01361 Tautomerase enzyme RG53_RS06510 PF01613 Flavin reductase like domain RG53_RS06515 PF00797 N-acetyltransferase RG53_RS06520 PF02567 Phenazine biosynthesis-like protein RG53_RS06525 PF02665 Nitrate reductase gamma subunit RG53_RS06530 PF02613 Nitrate reductase delta subunit RG53_RS06535 PF14711 Respiratory nitrate reductase beta C-terminal RG53_RS06535 PF13247 4Fe-4S dicluster domain RG53_RS06540 PF00384 Molybdopterin oxidoreductase RG53_RS06540 PF14710 Respiratory nitrate reductase alpha N-terminal RG53_RS06540 PF01568 Molydopterin dinucleotide binding domain RG53_RS06545 PF07690 Major Facilitator Superfamily RG53_RS06555 PF00267 Gram-negative porin RG53_RS06560 PF00892 EamA-like transporter family RG53_RS06565 PF01568 Molydopterin dinucleotide binding domain RG53_RS06565 PF00384 Molybdopterin oxidoreductase RG53_RS06565 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RG53_RS06570 PF01568 Molydopterin dinucleotide binding domain RG53_RS06570 PF00384 Molybdopterin oxidoreductase RG53_RS06570 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RG53_RS06575 PF13247 4Fe-4S dicluster domain RG53_RS06575 PF12800 4Fe-4S binding domain RG53_RS06575 PF09163 Formate dehydrogenase N, transmembrane RG53_RS06580 PF01292 Prokaryotic cytochrome b561 RG53_RS06585 PF01381 Helix-turn-helix RG53_RS06590 PF08240 Alcohol dehydrogenase GroES-like domain RG53_RS06590 PF00107 Zinc-binding dehydrogenase RG53_RS06595 PF00390 Malic enzyme, N-terminal domain RG53_RS06595 PF03949 Malic enzyme, NAD binding domain RG53_RS06600 PF08136 30S ribosomal protein subunit S22 family RG53_RS06605 PF10684 Putative biofilm-dependent modulation protein RG53_RS06615 PF02566 OsmC-like protein RG53_RS06620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RG53_RS06620 PF00005 ABC transporter RG53_RS06625 PF00005 ABC transporter RG53_RS06625 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RG53_RS06630 PF12911 N-terminal TM domain of oligopeptide transport permease C RG53_RS06630 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS06635 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS06640 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RG53_RS06645 PF01427 D-ala-D-ala dipeptidase RG53_RS06650 PF00990 Diguanylate cyclase, GGDEF domain RG53_RS06650 PF13426 PAS domain RG53_RS06650 PF00563 EAL domain RG53_RS06655 PF00990 Diguanylate cyclase, GGDEF domain RG53_RS06660 PF00990 Diguanylate cyclase, GGDEF domain RG53_RS06665 PF02638 Glycosyl hydrolase-like 10 RG53_RS06670 PF13520 Amino acid permease RG53_RS06675 PF00282 Pyridoxal-dependent decarboxylase conserved domain RG53_RS06690 PF00675 Insulinase (Peptidase family M16) RG53_RS06690 PF05193 Peptidase M16 inactive domain RG53_RS06695 PF07715 TonB-dependent Receptor Plug Domain RG53_RS06700 PF00005 ABC transporter RG53_RS06700 PF06472 ABC transporter transmembrane region 2 RG53_RS06705 PF04055 Radical SAM superfamily RG53_RS06705 PF13186 Iron-sulfur cluster-binding domain RG53_RS06710 PF00884 Sulfatase RG53_RS06715 PF12833 Helix-turn-helix domain RG53_RS06720 PF17073 Two-component-system connector protein RG53_RS06725 PF00384 Molybdopterin oxidoreductase RG53_RS06730 PF09160 FimH, mannose binding RG53_RS06735 PF00419 Fimbrial protein RG53_RS06740 PF00419 Fimbrial protein RG53_RS06745 PF00577 Outer membrane usher protein RG53_RS06745 PF13953 PapC C-terminal domain RG53_RS06745 PF13954 PapC N-terminal domain RG53_RS06750 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RG53_RS06750 PF02753 Pili assembly chaperone PapD, C-terminal domain RG53_RS06755 PF00419 Fimbrial protein RG53_RS06790 PF13419 Haloacid dehalogenase-like hydrolase RG53_RS06805 PF13276 HTH-like domain RG53_RS06805 PF13333 Integrase core domain RG53_RS06805 PF00665 Integrase core domain RG53_RS06820 PF03811 InsA N-terminal domain RG53_RS06820 PF12759 InsA C-terminal domain RG53_RS06825 PF03400 IS1 transposase RG53_RS06835 PF00419 Fimbrial protein RG53_RS06840 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RG53_RS06840 PF02753 Pili assembly chaperone PapD, C-terminal domain RG53_RS06845 PF13953 PapC C-terminal domain RG53_RS06845 PF00577 Outer membrane usher protein RG53_RS06845 PF13954 PapC N-terminal domain RG53_RS06850 PF00419 Fimbrial protein RG53_RS06875 PF13737 Transposase DDE domain RG53_RS06880 PF00465 Iron-containing alcohol dehydrogenase RG53_RS06885 PF12161 HsdM N-terminal domain RG53_RS06885 PF02384 N-6 DNA Methylase RG53_RS06895 PF02810 SEC-C motif RG53_RS06895 PF03695 Uncharacterised protein family (UPF0149) RG53_RS06900 PF18766 SWI2/SNF2 ATPase RG53_RS06900 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) RG53_RS06900 PF11867 Domain of unknown function (DUF3387) RG53_RS06945 PF13657 HipA N-terminal domain RG53_RS06945 PF07804 HipA-like C-terminal domain RG53_RS06950 PF01381 Helix-turn-helix RG53_RS06955 PF03797 Autotransporter beta-domain RG53_RS06960 PF13018 Extended Signal Peptide of Type V secretion system RG53_RS06965 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RG53_RS06965 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RG53_RS06970 PF04198 Putative sugar-binding domain RG53_RS06975 PF00005 ABC transporter RG53_RS06980 PF02653 Branched-chain amino acid transport system / permease component RG53_RS06985 PF02653 Branched-chain amino acid transport system / permease component RG53_RS06990 PF13407 Periplasmic binding protein domain RG53_RS06995 PF01791 DeoC/LacD family aldolase RG53_RS07000 PF03992 Antibiotic biosynthesis monooxygenase RG53_RS07005 PF13649 Methyltransferase domain RG53_RS07010 PF01062 Bestrophin, RFP-TM, chloride channel RG53_RS07020 PF01232 Mannitol dehydrogenase Rossmann domain RG53_RS07020 PF08125 Mannitol dehydrogenase C-terminal domain RG53_RS07030 PF00990 Diguanylate cyclase, GGDEF domain RG53_RS07035 PF13811 Domain of unknown function (DUF4186) RG53_RS07040 PF04960 Glutaminase RG53_RS07045 PF00171 Aldehyde dehydrogenase family RG53_RS07050 PF03466 LysR substrate binding domain RG53_RS07050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG53_RS07060 PF07690 Major Facilitator Superfamily RG53_RS07065 PF01914 MarC family integral membrane protein RG53_RS07070 PF01047 MarR family RG53_RS07075 PF12833 Helix-turn-helix domain RG53_RS07080 PF13999 MarB protein RG53_RS07085 PF00232 Glycosyl hydrolase family 1 RG53_RS07090 PF02264 LamB porin RG53_RS07090 PF11471 Maltoporin periplasmic N-terminal extension RG53_RS07095 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit RG53_RS07100 PF02378 Phosphotransferase system, EIIC RG53_RS07105 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RG53_RS07110 PF07702 UTRA domain RG53_RS07110 PF00392 Bacterial regulatory proteins, gntR family RG53_RS07115 PF00392 Bacterial regulatory proteins, gntR family RG53_RS07115 PF07702 UTRA domain RG53_RS07120 PF00892 EamA-like transporter family RG53_RS07125 PF07690 Major Facilitator Superfamily RG53_RS07135 PF00990 Diguanylate cyclase, GGDEF domain RG53_RS07140 PF04076 Bacterial OB fold (BOF) protein RG53_RS07145 PF02464 Competence-damaged protein RG53_RS07155 PF01432 Peptidase family M3 RG53_RS07165 PF00106 short chain dehydrogenase RG53_RS07170 PF00392 Bacterial regulatory proteins, gntR family RG53_RS07170 PF07729 FCD domain RG53_RS07175 PF14001 YdfZ protein RG53_RS07180 PF01232 Mannitol dehydrogenase Rossmann domain RG53_RS07180 PF08125 Mannitol dehydrogenase C-terminal domain RG53_RS07185 PF00083 Sugar (and other) transporter RG53_RS07185 PF07690 Major Facilitator Superfamily RG53_RS07195 PF02796 Helix-turn-helix domain of resolvase RG53_RS07195 PF00239 Resolvase, N terminal domain RG53_RS07200 PF02413 Caudovirales tail fibre assembly protein, lambda gpK RG53_RS07205 PF03335 Phage tail fibre repeat RG53_RS07205 PF07484 Phage Tail Collar Domain RG53_RS07210 PF06316 Enterobacterial Ail/Lom protein RG53_RS07240 PF06791 Prophage tail length tape measure protein RG53_RS07280 PF03864 Phage major capsid protein E RG53_RS07290 PF01972 Serine dehydrogenase proteinase RG53_RS07290 PF01957 NfeD-like C-terminal, partner-binding RG53_RS07300 PF02831 gpW RG53_RS07305 PF02413 Caudovirales tail fibre assembly protein, lambda gpK RG53_RS07310 PF07471 Phage DNA packaging protein Nu1 RG53_RS07315 PF13132 Domain of unknown function (DUF3950) RG53_RS07320 PF07166 Protein of unknown function (DUF1398) RG53_RS07325 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system RG53_RS07340 PF00313 'Cold-shock' DNA-binding domain RG53_RS07345 PF10721 Protein of unknown function (DUF2514) RG53_RS07350 PF00959 Phage lysozyme RG53_RS07355 PF07041 Protein of unknown function (DUF1327) RG53_RS07360 PF04971 Bacteriophage P21 holin S RG53_RS07365 PF12833 Helix-turn-helix domain RG53_RS07375 PF08349 Protein of unknown function (DUF1722) RG53_RS07380 PF08212 Lipocalin-like domain RG53_RS07385 PF06530 Phage antitermination protein Q RG53_RS07390 PF06147 Protein of unknown function (DUF968) RG53_RS07405 PF01848 Hok/gef family RG53_RS07410 PF05016 ParE toxin of type II toxin-antitoxin system, parDE RG53_RS07415 PF04221 RelB antitoxin RG53_RS07430 PF14282 FlxA-like protein RG53_RS07485 PF01381 Helix-turn-helix RG53_RS07490 PF07151 Protein of unknown function (DUF1391) RG53_RS07510 PF05358 DicB protein RG53_RS07515 PF07358 Protein of unknown function (DUF1482) RG53_RS07530 PF00589 Phage integrase family RG53_RS07530 PF12167 Arm DNA-binding domain RG53_RS07540 PF08240 Alcohol dehydrogenase GroES-like domain RG53_RS07540 PF00107 Zinc-binding dehydrogenase RG53_RS07545 PF13378 Enolase C-terminal domain-like RG53_RS07545 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RG53_RS07555 PF02694 Uncharacterised BCR, YnfA/UPF0060 family RG53_RS07560 PF06932 Protein of unknown function (DUF1283) RG53_RS07565 PF13302 Acetyltransferase (GNAT) domain RG53_RS07570 PF06788 Uncharacterised protein family (UPF0257) RG53_RS07575 PF06649 Protein of unknown function (DUF1161) RG53_RS07580 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RG53_RS07580 PF00384 Molybdopterin oxidoreductase RG53_RS07580 PF01568 Molydopterin dinucleotide binding domain RG53_RS07585 PF00384 Molybdopterin oxidoreductase RG53_RS07585 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RG53_RS07585 PF01568 Molydopterin dinucleotide binding domain RG53_RS07590 PF13247 4Fe-4S dicluster domain RG53_RS07590 PF12800 4Fe-4S binding domain RG53_RS07595 PF04976 DMSO reductase anchor subunit (DmsC) RG53_RS07600 PF02613 Nitrate reductase delta subunit RG53_RS07605 PF00654 Voltage gated chloride channel RG53_RS07615 PF00480 ROK family RG53_RS07620 PF03466 LysR substrate binding domain RG53_RS07620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG53_RS07625 PF07690 Major Facilitator Superfamily RG53_RS07645 PF00089 Trypsin RG53_RS07650 PF00893 Small Multidrug Resistance protein RG53_RS07655 PF00893 Small Multidrug Resistance protein RG53_RS07660 PF01594 AI-2E family transporter RG53_RS07665 PF02233 NAD(P) transhydrogenase beta subunit RG53_RS07670 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch RG53_RS07670 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RG53_RS07670 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RG53_RS07675 PF07338 Protein of unknown function (DUF1471) RG53_RS07685 PF13520 Amino acid permease RG53_RS07695 PF06942 GlpM protein RG53_RS07700 PF00486 Transcriptional regulatory protein, C terminal RG53_RS07700 PF00072 Response regulator receiver domain RG53_RS07705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG53_RS07705 PF00672 HAMP domain RG53_RS07705 PF00512 His Kinase A (phospho-acceptor) domain RG53_RS07710 PF05472 DNA replication terminus site-binding protein (Ter protein) RG53_RS07715 PF00206 Lyase RG53_RS07715 PF10415 Fumarase C C-terminus RG53_RS07720 PF05681 Fumarate hydratase (Fumerase) RG53_RS07720 PF05683 Fumarase C-terminus RG53_RS07725 PF01238 Phosphomannose isomerase type I RG53_RS07730 PF06097 Bacterial protein of unknown function (DUF945) RG53_RS07735 PF03573 outer membrane porin, OprD family RG53_RS07745 PF02837 Glycosyl hydrolases family 2, sugar binding domain RG53_RS07745 PF02836 Glycosyl hydrolases family 2, TIM barrel domain RG53_RS07745 PF00703 Glycosyl hydrolases family 2 RG53_RS07750 PF00440 Bacterial regulatory proteins, tetR family RG53_RS07765 PF12759 InsA C-terminal domain RG53_RS07765 PF03811 InsA N-terminal domain RG53_RS07770 PF03400 IS1 transposase RG53_RS07780 PF00356 Bacterial regulatory proteins, lacI family RG53_RS07780 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RG53_RS07785 PF00367 phosphotransferase system, EIIB RG53_RS07785 PF02378 Phosphotransferase system, EIIC RG53_RS07790 PF00155 Aminotransferase class I and II RG53_RS07795 PF00962 Adenosine/AMP deaminase RG53_RS07800 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RG53_RS07800 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RG53_RS07815 PF05321 Haemolysin expression modulating protein RG53_RS07820 PF10754 Protein of unknown function (DUF2569) RG53_RS07825 PF02508 Rnf-Nqr subunit, membrane protein RG53_RS07830 PF04060 Putative Fe-S cluster RG53_RS07835 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit RG53_RS07835 PF10531 SLBB domain RG53_RS07835 PF13375 RnfC Barrel sandwich hybrid domain RG53_RS07835 PF12838 4Fe-4S dicluster domain RG53_RS07840 PF03116 NQR2, RnfD, RnfE family RG53_RS07845 PF04205 FMN-binding domain RG53_RS07850 PF02508 Rnf-Nqr subunit, membrane protein RG53_RS07855 PF00730 HhH-GPD superfamily base excision DNA repair protein RG53_RS07855 PF00633 Helix-hairpin-helix motif RG53_RS07855 PF10576 Iron-sulfur binding domain of endonuclease III RG53_RS07865 PF00854 POT family RG53_RS07870 PF02798 Glutathione S-transferase, N-terminal domain RG53_RS07870 PF00043 Glutathione S-transferase, C-terminal domain RG53_RS07875 PF08543 Phosphomethylpyrimidine kinase RG53_RS07880 PF00579 tRNA synthetases class I (W and Y) RG53_RS07880 PF01479 S4 domain RG53_RS07885 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region RG53_RS07885 PF01243 Pyridoxamine 5'-phosphate oxidase RG53_RS07890 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme RG53_RS07895 PF03702 Anhydro-N-acetylmuramic acid kinase RG53_RS07900 PF05433 Glycine zipper 2TM domain RG53_RS07905 PF01047 MarR family RG53_RS07910 PF07869 Protein of unknown function (DUF1656) RG53_RS07915 PF00529 HlyD membrane-fusion protein of T1SS RG53_RS07915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RG53_RS07920 PF04632 Fusaric acid resistance protein family RG53_RS07925 PF00080 Copper/zinc superoxide dismutase (SODC) RG53_RS07930 PF00248 Aldo/keto reductase family RG53_RS07935 PF06945 Protein of unknown function (DUF1289) RG53_RS07940 PF16925 Tetracyclin repressor-like, C-terminal domain RG53_RS07940 PF00440 Bacterial regulatory proteins, tetR family RG53_RS07945 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RG53_RS07950 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RG53_RS07955 PF00929 Exonuclease RG53_RS07960 PF00271 Helicase conserved C-terminal domain RG53_RS07960 PF08494 DEAD/H associated RG53_RS07960 PF00270 DEAD/DEAH box helicase RG53_RS07965 PF00462 Glutaredoxin RG53_RS07970 PF00877 NlpC/P60 family RG53_RS07975 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RG53_RS07975 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RG53_RS07980 PF07690 Major Facilitator Superfamily RG53_RS07995 PF00356 Bacterial regulatory proteins, lacI family RG53_RS08000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG53_RS08000 PF03466 LysR substrate binding domain RG53_RS08005 PF07690 Major Facilitator Superfamily RG53_RS08015 PF00677 Lumazine binding domain RG53_RS08020 PF01554 MatE RG53_RS08025 PF03212 Pertactin RG53_RS08025 PF16168 Adhesin of bacterial autotransporter system, probable stalk RG53_RS08040 PF08803 Putative mono-oxygenase ydhR RG53_RS08045 PF13454 FAD-NAD(P)-binding RG53_RS08055 PF01292 Prokaryotic cytochrome b561 RG53_RS08060 PF13247 4Fe-4S dicluster domain RG53_RS08070 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain RG53_RS08070 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 RG53_RS08075 PF12800 4Fe-4S binding domain RG53_RS08075 PF13247 4Fe-4S dicluster domain RG53_RS08080 PF10965 Protein of unknown function (DUF2767) RG53_RS08085 PF02887 Pyruvate kinase, alpha/beta domain RG53_RS08085 PF00224 Pyruvate kinase, barrel domain RG53_RS08090 PF04728 Lipoprotein leucine-zipper RG53_RS08095 PF01476 LysM domain RG53_RS08095 PF17969 L,D-transpeptidase C-terminal domain RG53_RS08095 PF03734 L,D-transpeptidase catalytic domain RG53_RS08100 PF02657 Fe-S metabolism associated domain RG53_RS08105 PF00266 Aminotransferase class-V RG53_RS08110 PF01458 Uncharacterized protein family (UPF0051) RG53_RS08115 PF00005 ABC transporter RG53_RS08120 PF01458 Uncharacterized protein family (UPF0051) RG53_RS08125 PF01521 Iron-sulphur cluster biosynthesis RG53_RS08130 PF15930 Domain of unknown function RG53_RS08135 PF03061 Thioesterase superfamily RG53_RS08140 PF01565 FAD binding domain RG53_RS08140 PF13183 4Fe-4S dicluster domain RG53_RS08140 PF02913 FAD linked oxidases, C-terminal domain RG53_RS08150 PF01594 AI-2E family transporter RG53_RS08160 PF08965 Domain of unknown function (DUF1870) RG53_RS08165 PF07690 Major Facilitator Superfamily RG53_RS08170 PF07690 Major Facilitator Superfamily RG53_RS08175 PF08501 Shikimate dehydrogenase substrate binding domain RG53_RS08175 PF18317 Shikimate 5'-dehydrogenase C-terminal domain RG53_RS08180 PF01487 Type I 3-dehydroquinase RG53_RS08185 PF01144 Coenzyme A transferase RG53_RS08190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RG53_RS08190 PF02770 Acyl-CoA dehydrogenase, middle domain RG53_RS08190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RG53_RS08195 PF12833 Helix-turn-helix domain RG53_RS08195 PF02311 AraC-like ligand binding domain RG53_RS08205 PF01012 Electron transfer flavoprotein domain RG53_RS08210 PF00766 Electron transfer flavoprotein FAD-binding domain RG53_RS08210 PF01012 Electron transfer flavoprotein domain RG53_RS08215 PF01494 FAD binding domain RG53_RS08225 PF13193 AMP-binding enzyme C-terminal domain RG53_RS08225 PF00501 AMP-binding enzyme RG53_RS08230 PF00391 PEP-utilising enzyme, mobile domain RG53_RS08230 PF02896 PEP-utilising enzyme, TIM barrel domain RG53_RS08230 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain RG53_RS08235 PF03618 Kinase/pyrophosphorylase RG53_RS08240 PF00793 DAHP synthetase I family RG53_RS08245 PF10636 Hemin uptake protein hemP RG53_RS08250 PF02696 Uncharacterized ACR, YdiU/UPF0061 family RG53_RS08255 PF00563 EAL domain RG53_RS08260 PF00877 NlpC/P60 family RG53_RS08265 PF00005 ABC transporter RG53_RS08270 PF00255 Glutathione peroxidase RG53_RS08275 PF01032 FecCD transport family RG53_RS08280 PF00216 Bacterial DNA-binding protein RG53_RS08285 PF03483 B3/4 domain RG53_RS08285 PF03484 tRNA synthetase B5 domain RG53_RS08285 PF03147 Ferredoxin-fold anticodon binding domain RG53_RS08285 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain RG53_RS08285 PF01588 Putative tRNA binding domain RG53_RS08290 PF01409 tRNA synthetases class II core domain (F) RG53_RS08290 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain RG53_RS08305 PF00453 Ribosomal protein L20 RG53_RS08310 PF01632 Ribosomal protein L35 RG53_RS08315 PF00707 Translation initiation factor IF-3, C-terminal domain RG53_RS08315 PF05198 Translation initiation factor IF-3, N-terminal domain RG53_RS08320 PF02824 TGS domain RG53_RS08320 PF03129 Anticodon binding domain RG53_RS08320 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RG53_RS08320 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RG53_RS08335 PF04338 Protein of unknown function, DUF481 RG53_RS08340 PF00294 pfkB family carbohydrate kinase RG53_RS08345 PF11080 Endoribonuclease GhoS RG53_RS08350 PF03881 Fructosamine kinase RG53_RS08355 PF14002 YniB-like protein RG53_RS08360 PF13419 Haloacid dehalogenase-like hydrolase RG53_RS08365 PF04307 LexA-binding, inner membrane-associated putative hydrolase RG53_RS08370 PF00375 Sodium:dicarboxylate symporter family RG53_RS08385 PF10729 Cell division activator CedA RG53_RS08390 PF00199 Catalase RG53_RS08390 PF06628 Catalase-related immune-responsive RG53_RS08390 PF18011 C-terminal domain found in long catalases RG53_RS08395 PF02371 Transposase IS116/IS110/IS902 family RG53_RS08395 PF01548 Transposase RG53_RS08405 PF04794 YdjC-like protein RG53_RS08410 PF02056 Family 4 glycosyl hydrolase RG53_RS08410 PF11975 Family 4 glycosyl hydrolase C-terminal domain RG53_RS08415 PF07883 Cupin domain RG53_RS08415 PF12833 Helix-turn-helix domain RG53_RS08420 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit RG53_RS08425 PF02378 Phosphotransferase system, EIIC RG53_RS08430 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RG53_RS08440 PF04355 SmpA / OmlA family RG53_RS08445 PF02540 NAD synthase RG53_RS08455 PF05962 HutD RG53_RS08460 PF07813 LTXXQ motif family protein RG53_RS08465 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family RG53_RS08470 PF04996 Succinylarginine dihydrolase RG53_RS08475 PF00171 Aldehyde dehydrogenase family RG53_RS08480 PF04958 Arginine N-succinyltransferase beta subunit RG53_RS08485 PF00202 Aminotransferase class-III RG53_RS08495 PF03372 Endonuclease/Exonuclease/phosphatase family RG53_RS08500 PF09335 SNARE associated Golgi protein RG53_RS08510 PF09335 SNARE associated Golgi protein RG53_RS08515 PF02627 Carboxymuconolactone decarboxylase family RG53_RS08520 PF13416 Bacterial extracellular solute-binding protein RG53_RS08525 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS08530 PF00005 ABC transporter RG53_RS08535 PF00581 Rhodanese-like domain RG53_RS08540 PF01066 CDP-alcohol phosphatidyltransferase RG53_RS08545 PF00293 NUDIX domain RG53_RS08550 PF07383 Protein of unknown function (DUF1496) RG53_RS08555 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain RG53_RS08555 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RG53_RS08565 PF01131 DNA topoisomerase RG53_RS08565 PF01751 Toprim domain RG53_RS08570 PF02769 AIR synthase related protein, C-terminal domain RG53_RS08570 PF00586 AIR synthase related protein, N-terminal domain RG53_RS08580 PF00881 Nitroreductase family RG53_RS08585 PF01343 Peptidase family S49 RG53_RS08590 PF00710 Asparaginase, N-terminal RG53_RS08590 PF17763 Glutaminase/Asparaginase C-terminal domain RG53_RS08595 PF00857 Isochorismatase family RG53_RS08600 PF07023 Protein of unknown function (DUF1315) RG53_RS08605 PF01641 SelR domain RG53_RS08610 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RG53_RS08610 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RG53_RS08615 PF01263 Aldose 1-epimerase RG53_RS08620 PF00248 Aldo/keto reductase family RG53_RS08625 PF06629 MltA-interacting protein MipA RG53_RS08630 PF08298 PrkA AAA domain RG53_RS08630 PF06798 PrkA serine protein kinase C-terminal domain RG53_RS08635 PF04285 Protein of unknown function (DUF444) RG53_RS08640 PF00990 Diguanylate cyclase, GGDEF domain RG53_RS08640 PF17158 Membrane-associated sensor, integral membrane domain RG53_RS08645 PF17155 Gammaproteobacterial periplasmic sensor domain RG53_RS08645 PF00990 Diguanylate cyclase, GGDEF domain RG53_RS08650 PF04073 Aminoacyl-tRNA editing domain RG53_RS08660 PF04284 Protein of unknown function (DUF441) RG53_RS08665 PF12833 Helix-turn-helix domain RG53_RS08665 PF02311 AraC-like ligand binding domain RG53_RS08670 PF07690 Major Facilitator Superfamily RG53_RS08675 PF04343 Protein of unknown function, DUF488 RG53_RS08680 PF03891 Domain of unknown function (DUF333) RG53_RS08685 PF00990 Diguanylate cyclase, GGDEF domain RG53_RS08685 PF13185 GAF domain RG53_RS08700 PF04226 Transglycosylase associated protein RG53_RS08705 PF01385 Probable transposase RG53_RS08705 PF12323 Helix-turn-helix domain RG53_RS08705 PF07282 Putative transposase DNA-binding domain RG53_RS08710 PF01797 Transposase IS200 like RG53_RS08720 PF08956 Domain of unknown function (DUF1869) RG53_RS08725 PF09313 Domain of unknown function (DUF1971) RG53_RS08730 PF01810 LysE type translocator RG53_RS08735 PF03466 LysR substrate binding domain RG53_RS08735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG53_RS08740 PF00180 Isocitrate/isopropylmalate dehydrogenase RG53_RS08745 PF02028 BCCT, betaine/carnitine/choline family transporter RG53_RS08750 PF00848 Ring hydroxylating alpha subunit (catalytic domain) RG53_RS08750 PF00355 Rieske [2Fe-2S] domain RG53_RS08755 PF00970 Oxidoreductase FAD-binding domain RG53_RS08755 PF00175 Oxidoreductase NAD-binding domain RG53_RS08755 PF00111 2Fe-2S iron-sulfur cluster binding domain RG53_RS08760 PF01612 3'-5' exonuclease RG53_RS08760 PF00570 HRDC domain RG53_RS08765 PF13193 AMP-binding enzyme C-terminal domain RG53_RS08765 PF00501 AMP-binding enzyme RG53_RS08770 PF03843 Outer membrane lipoprotein Slp family RG53_RS08775 PF00814 Glycoprotease family RG53_RS08780 PF13307 Helicase C-terminal domain RG53_RS08780 PF04851 Type III restriction enzyme, res subunit RG53_RS08785 PF01042 Endoribonuclease L-PSP RG53_RS08790 PF08986 Domain of unknown function (DUF1889) RG53_RS08795 PF03701 Uncharacterised protein family (UPF0181) RG53_RS08800 PF04715 Anthranilate synthase component I, N terminal region RG53_RS08800 PF00425 chorismate binding enzyme RG53_RS08805 PF00293 NUDIX domain RG53_RS08810 PF03315 Serine dehydratase beta chain RG53_RS08810 PF03313 Serine dehydratase alpha chain RG53_RS08815 PF12792 CSS motif domain associated with EAL RG53_RS08815 PF00563 EAL domain RG53_RS08820 PF03741 Integral membrane protein TerC family RG53_RS08820 PF03471 Transporter associated domain RG53_RS08835 PF03610 PTS system fructose IIA component RG53_RS08835 PF03830 PTS system sorbose subfamily IIB component RG53_RS08840 PF03609 PTS system sorbose-specific iic component RG53_RS08845 PF03613 PTS system mannose/fructose/sorbose family IID component RG53_RS08850 PF06173 Protein of unknown function (DUF986) RG53_RS08860 PF02659 Putative manganese efflux pump RG53_RS08865 PF13847 Methyltransferase domain RG53_RS08870 PF00313 'Cold-shock' DNA-binding domain RG53_RS08875 PF10736 Protein of unknown function (DUF2627) RG53_RS08885 PF13974 YebO-like protein RG53_RS08890 PF13998 MgrB protein RG53_RS08895 PF13996 YobH-like protein RG53_RS08900 PF09339 IclR helix-turn-helix domain RG53_RS08900 PF01614 Bacterial transcriptional regulator RG53_RS08905 PF07690 Major Facilitator Superfamily RG53_RS08910 PF01435 Peptidase family M48 RG53_RS08915 PF17804 Tail specific protease N-terminal domain RG53_RS08915 PF11818 C-terminal domain of tail specific protease (DUF3340) RG53_RS08915 PF03572 Peptidase family S41 RG53_RS08915 PF00595 PDZ domain RG53_RS08920 PF17516 ProQ C-terminal domain RG53_RS08920 PF04352 ProQ/FINO family RG53_RS08925 PF13185 GAF domain RG53_RS08930 PF04403 Paraquat-inducible protein A RG53_RS08935 PF02470 MlaD protein RG53_RS08940 PF01189 16S rRNA methyltransferase RsmB/F RG53_RS08940 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF RG53_RS08940 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF RG53_RS08945 PF07351 Protein of unknown function (DUF1480) RG53_RS08950 PF07358 Protein of unknown function (DUF1482) RG53_RS08955 PF00149 Calcineurin-like phosphoesterase RG53_RS08965 PF10709 Protein of unknown function (DUF2511) RG53_RS08970 PF05425 Copper resistance protein D RG53_RS08975 PF04234 CopC domain RG53_RS08980 PF06440 DNA polymerase III, theta subunit RG53_RS08985 PF00795 Carbon-nitrogen hydrolase RG53_RS08990 PF00929 Exonuclease RG53_RS08995 PF00326 Prolyl oligopeptidase family RG53_RS08995 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain RG53_RS09005 PF04391 Protein of unknown function (DUF533) RG53_RS09020 PF13995 YebF-like protein RG53_RS09025 PF07130 YebG protein RG53_RS09030 PF02222 ATP-grasp domain RG53_RS09035 PF01081 KDPG and KHG aldolase RG53_RS09040 PF00920 Dehydratase family RG53_RS09045 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain RG53_RS09045 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain RG53_RS09060 PF01418 Helix-turn-helix domain, rpiR family RG53_RS09060 PF01380 SIS domain RG53_RS09065 PF02887 Pyruvate kinase, alpha/beta domain RG53_RS09065 PF00224 Pyruvate kinase, barrel domain RG53_RS09070 PF03279 Bacterial lipid A biosynthesis acyltransferase RG53_RS09075 PF08525 Opacity-associated protein A N-terminal motif RG53_RS09075 PF01476 LysM domain RG53_RS09075 PF01551 Peptidase family M23 RG53_RS09080 PF01297 Zinc-uptake complex component A periplasmic RG53_RS09085 PF00005 ABC transporter RG53_RS09090 PF00950 ABC 3 transport family RG53_RS09095 PF05491 RuvB C-terminal winged helix domain RG53_RS09095 PF05496 Holliday junction DNA helicase RuvB P-loop domain RG53_RS09095 PF17864 RuvB AAA lid domain RG53_RS09100 PF07499 RuvA, C-terminal domain RG53_RS09100 PF01330 RuvA N terminal domain RG53_RS09110 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family RG53_RS09115 PF02075 Crossover junction endodeoxyribonuclease RuvC RG53_RS09120 PF01709 Transcriptional regulator RG53_RS09125 PF00293 NUDIX domain RG53_RS09130 PF00152 tRNA synthetases class II (D, K and N) RG53_RS09130 PF02938 GAD domain RG53_RS09130 PF01336 OB-fold nucleic acid binding domain RG53_RS09135 PF00857 Isochorismatase family RG53_RS09140 PF01904 Protein of unknown function DUF72 RG53_RS09145 PF01124 MAPEG family RG53_RS09150 PF13649 Methyltransferase domain RG53_RS09155 PF08003 Protein of unknown function (DUF1698) RG53_RS09165 PF02371 Transposase IS116/IS110/IS902 family RG53_RS09165 PF01548 Transposase RG53_RS09170 PF01568 Molydopterin dinucleotide binding domain RG53_RS09170 PF18364 Molybdopterin oxidoreductase N-terminal domain RG53_RS09170 PF00384 Molybdopterin oxidoreductase RG53_RS09175 PF03264 NapC/NirT cytochrome c family, N-terminal region RG53_RS09180 PF03932 CutC family RG53_RS09185 PF06185 YecM protein RG53_RS09195 PF05746 DALR anticodon binding domain RG53_RS09195 PF03485 Arginyl tRNA synthetase N terminal domain RG53_RS09195 PF00750 tRNA synthetases class I (R) RG53_RS09200 PF07007 Lysozyme inhibitor LprI RG53_RS09205 PF06366 Flagellar protein FlhE RG53_RS09210 PF00771 FHIPEP family RG53_RS09215 PF01312 FlhB HrpN YscU SpaS Family RG53_RS09220 PF04344 Chemotaxis phosphatase, CheZ RG53_RS09225 PF00072 Response regulator receiver domain RG53_RS09230 PF00072 Response regulator receiver domain RG53_RS09230 PF01339 CheB methylesterase RG53_RS09235 PF03705 CheR methyltransferase, all-alpha domain RG53_RS09235 PF01739 CheR methyltransferase, SAM binding domain RG53_RS09240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RG53_RS09240 PF02203 Tar ligand binding domain homologue RG53_RS09240 PF00672 HAMP domain RG53_RS09245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RG53_RS09245 PF00672 HAMP domain RG53_RS09245 PF02203 Tar ligand binding domain homologue RG53_RS09250 PF01584 CheW-like domain RG53_RS09255 PF09078 CheY binding RG53_RS09255 PF02895 Signal transducing histidine kinase, homodimeric domain RG53_RS09255 PF01584 CheW-like domain RG53_RS09255 PF01627 Hpt domain RG53_RS09255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG53_RS09260 PF13677 Membrane MotB of proton-channel complex MotA/MotB RG53_RS09260 PF00691 OmpA family RG53_RS09265 PF01618 MotA/TolQ/ExbB proton channel family RG53_RS09270 PF05280 Flagellar transcriptional activator (FlhC) RG53_RS09275 PF05247 Flagellar transcriptional activator (FlhD) RG53_RS09280 PF00582 Universal stress protein family RG53_RS09285 PF00982 Glycosyltransferase family 20 RG53_RS09290 PF02358 Trehalose-phosphatase RG53_RS09295 PF02653 Branched-chain amino acid transport system / permease component RG53_RS09300 PF00005 ABC transporter RG53_RS09305 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RG53_RS09315 PF00210 Ferritin-like domain RG53_RS09320 PF10964 Protein of unknown function (DUF2766) RG53_RS09330 PF13992 YecR-like lipoprotein RG53_RS09335 PF00210 Ferritin-like domain RG53_RS09340 PF10678 Protein of unknown function (DUF2492) RG53_RS09345 PF03222 Tryptophan/tyrosine permease family RG53_RS09350 PF02810 SEC-C motif RG53_RS09350 PF03695 Uncharacterised protein family (UPF0149) RG53_RS09370 PF01066 CDP-alcohol phosphatidyltransferase RG53_RS09375 PF01541 GIY-YIG catalytic domain RG53_RS09375 PF08459 UvrC Helix-hairpin-helix N-terminal RG53_RS09375 PF02151 UvrB/uvrC motif RG53_RS09380 PF00072 Response regulator receiver domain RG53_RS09380 PF00196 Bacterial regulatory proteins, luxR family RG53_RS09390 PF10769 Protein of unknown function (DUF2594) RG53_RS09395 PF03472 Autoinducer binding domain RG53_RS09395 PF00196 Bacterial regulatory proteins, luxR family RG53_RS09400 PF00005 ABC transporter RG53_RS09405 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS09410 PF00291 Pyridoxal-phosphate dependent enzyme RG53_RS09415 PF00497 Bacterial extracellular solute-binding proteins, family 3 RG53_RS09420 PF02899 Phage integrase, N-terminal SAM-like domain RG53_RS09425 PF04539 Sigma-70 region 3 RG53_RS09425 PF04545 Sigma-70, region 4 RG53_RS09425 PF04542 Sigma-70 region 2 RG53_RS09430 PF00700 Bacterial flagellin C-terminal helical region RG53_RS09430 PF00669 Bacterial flagellin N-terminal helical region RG53_RS09440 PF02465 Flagellar hook-associated protein 2 N-terminus RG53_RS09440 PF07196 Flagellin hook IN motif RG53_RS09440 PF07195 Flagellar hook-associated protein 2 C-terminus RG53_RS09445 PF02561 Flagellar protein FliS RG53_RS09450 PF05400 Flagellar protein FliT RG53_RS09455 PF00128 Alpha amylase, catalytic domain RG53_RS09455 PF02806 Alpha amylase, C-terminal all-beta domain RG53_RS09460 PF13987 YedD-like protein RG53_RS09470 PF04143 Sulphur transport RG53_RS09475 PF01206 Sulfurtransferase TusA RG53_RS09480 PF02586 SOS response associated peptidase (SRAP) RG53_RS09490 PF02049 Flagellar hook-basal body complex protein FliE RG53_RS09500 PF08345 Flagellar M-ring protein C-terminal RG53_RS09500 PF01514 Secretory protein of YscJ/FliF family RG53_RS09505 PF14842 FliG N-terminal domain RG53_RS09505 PF14841 FliG middle domain RG53_RS09505 PF01706 FliG C-terminal domain RG53_RS09510 PF02108 Flagellar assembly protein FliH RG53_RS09515 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RG53_RS09515 PF18269 T3SS EscN ATPase C-terminal domain RG53_RS09520 PF02050 Flagellar FliJ protein RG53_RS09525 PF02120 Flagellar hook-length control protein FliK RG53_RS09530 PF03748 Flagellar basal body-associated protein FliL RG53_RS09535 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term RG53_RS09535 PF02154 Flagellar motor switch protein FliM RG53_RS09540 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term RG53_RS09540 PF16973 Flagellar motor switch protein FliN N-terminal RG53_RS09545 PF04347 Flagellar biosynthesis protein, FliO RG53_RS09550 PF00813 FliP family RG53_RS09555 PF01313 Bacterial export proteins, family 3 RG53_RS09560 PF01311 Bacterial export proteins, family 1 RG53_RS09565 PF00196 Bacterial regulatory proteins, luxR family RG53_RS09570 PF10781 Dextransucrase DSRB RG53_RS09580 PF10733 Protein of unknown function (DUF2525) RG53_RS09590 PF17151 Periplasmic sensor domain RG53_RS09590 PF00990 Diguanylate cyclase, GGDEF domain RG53_RS09600 PF09926 Uncharacterized small protein (DUF2158) RG53_RS09605 PF05661 Protein of unknown function (DUF808) RG53_RS09610 PF00892 EamA-like transporter family RG53_RS09615 PF03852 DNA mismatch endonuclease Vsr RG53_RS09620 PF18284 DNA methylase N-terminal domain RG53_RS09620 PF00145 C-5 cytosine-specific DNA methylase RG53_RS09625 PF01966 HD domain RG53_RS09640 PF00267 Gram-negative porin RG53_RS09655 PF00512 His Kinase A (phospho-acceptor) domain RG53_RS09655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG53_RS09660 PF00072 Response regulator receiver domain RG53_RS09660 PF00486 Transcriptional regulatory protein, C terminal RG53_RS09665 PF00576 HIUase/Transthyretin family RG53_RS09670 PF00174 Oxidoreductase molybdopterin binding domain RG53_RS09675 PF01794 Ferric reductase like transmembrane component RG53_RS09680 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment RG53_RS09685 PF01292 Prokaryotic cytochrome b561 RG53_RS09700 PF06167 Glucose-regulated metallo-peptidase M90 RG53_RS09725 PF00083 Sugar (and other) transporter RG53_RS09725 PF07690 Major Facilitator Superfamily RG53_RS09730 PF01048 Phosphorylase superfamily RG53_RS09730 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus RG53_RS09735 PF01709 Transcriptional regulator RG53_RS09745 PF01554 MatE RG53_RS09755 PF03466 LysR substrate binding domain RG53_RS09755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG53_RS09760 PF03466 LysR substrate binding domain RG53_RS09760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG53_RS09770 PF03734 L,D-transpeptidase catalytic domain RG53_RS09770 PF17969 L,D-transpeptidase C-terminal domain RG53_RS09775 PF02277 Phosphoribosyltransferase RG53_RS09780 PF02654 Cobalamin-5-phosphate synthase RG53_RS09785 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase RG53_RS09790 PF01890 Cobalamin synthesis G C-terminus RG53_RS09790 PF11760 Cobalamin synthesis G N-terminal RG53_RS09790 PF11761 Cobalamin biosynthesis central region RG53_RS09795 PF10114 Sensory domain found in PocR RG53_RS09795 PF12833 Helix-turn-helix domain RG53_RS09800 PF00230 Major intrinsic protein RG53_RS09805 PF00936 BMC domain RG53_RS09810 PF00936 BMC domain RG53_RS09815 PF02286 Dehydratase large subunit RG53_RS09820 PF02288 Dehydratase medium subunit RG53_RS09825 PF02287 Dehydratase small subunit RG53_RS09830 PF18427 DD-reactivating factor swiveling domain RG53_RS09830 PF08841 Diol dehydratase reactivase ATPase-like domain RG53_RS09840 PF00936 BMC domain RG53_RS09845 PF00936 BMC domain RG53_RS09850 PF06130 Phosphate propanoyltransferase RG53_RS09860 PF03319 Ethanolamine utilisation protein EutN/carboxysome RG53_RS09865 PF01923 Cobalamin adenosyltransferase RG53_RS09870 PF00171 Aldehyde dehydrogenase family RG53_RS09875 PF00171 Aldehyde dehydrogenase family RG53_RS09875 PF00465 Iron-containing alcohol dehydrogenase RG53_RS09880 PF10531 SLBB domain RG53_RS09880 PF13375 RnfC Barrel sandwich hybrid domain RG53_RS09880 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit RG53_RS09880 PF13237 4Fe-4S dicluster domain RG53_RS09890 PF00936 BMC domain RG53_RS09895 PF10662 Ethanolamine utilisation - propanediol utilisation RG53_RS09900 PF04363 Protein of unknown function (DUF496) RG53_RS09905 PF04632 Fusaric acid resistance protein family RG53_RS09910 PF06445 GyrI-like small molecule binding domain RG53_RS09915 PF07943 Penicillin-binding protein 5, C-terminal domain RG53_RS09915 PF00768 D-alanyl-D-alanine carboxypeptidase RG53_RS09920 PF00929 Exonuclease RG53_RS09920 PF08411 Exonuclease C-terminal RG53_RS09925 PF01206 Sulfurtransferase TusA RG53_RS09930 PF04143 Sulphur transport RG53_RS09935 PF13520 Amino acid permease RG53_RS09940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG53_RS09940 PF03466 LysR substrate binding domain RG53_RS09945 PF01370 NAD dependent epimerase/dehydratase family RG53_RS09950 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system RG53_RS09955 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system RG53_RS09970 PF01634 ATP phosphoribosyltransferase RG53_RS09970 PF08029 HisG, C-terminal domain RG53_RS09975 PF00815 Histidinol dehydrogenase RG53_RS09980 PF00155 Aminotransferase class I and II RG53_RS09985 PF08645 Polynucleotide kinase 3 phosphatase RG53_RS09985 PF00475 Imidazoleglycerol-phosphate dehydratase RG53_RS09990 PF00117 Glutamine amidotransferase class-I RG53_RS09995 PF00977 Histidine biosynthesis protein RG53_RS10000 PF00977 Histidine biosynthesis protein RG53_RS10005 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase RG53_RS10005 PF01502 Phosphoribosyl-AMP cyclohydrolase RG53_RS10015 PF13439 Glycosyltransferase Family 4 RG53_RS10015 PF00534 Glycosyl transferases group 1 RG53_RS10025 PF08241 Methyltransferase domain RG53_RS10030 PF14524 Wzt C-terminal domain RG53_RS10030 PF00005 ABC transporter RG53_RS10040 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RG53_RS10040 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RG53_RS10040 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RG53_RS10040 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RG53_RS10045 PF01050 Mannose-6-phosphate isomerase RG53_RS10045 PF00483 Nucleotidyl transferase RG53_RS10060 PF02706 Chain length determinant protein RG53_RS10065 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RG53_RS10065 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RG53_RS10065 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RG53_RS10070 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain RG53_RS10070 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RG53_RS10075 PF00535 Glycosyl transferase family 2 RG53_RS10090 PF00535 Glycosyl transferase family 2 RG53_RS10110 PF00483 Nucleotidyl transferase RG53_RS10115 PF01370 NAD dependent epimerase/dehydratase family RG53_RS10125 PF00534 Glycosyl transferases group 1 RG53_RS10125 PF13439 Glycosyltransferase Family 4 RG53_RS10130 PF04230 Polysaccharide pyruvyl transferase RG53_RS10140 PF02397 Bacterial sugar transferase RG53_RS10145 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RG53_RS10145 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RG53_RS10145 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RG53_RS10145 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RG53_RS10150 PF00483 Nucleotidyl transferase RG53_RS10150 PF01050 Mannose-6-phosphate isomerase RG53_RS10155 PF13579 Glycosyl transferase 4-like domain RG53_RS10155 PF00534 Glycosyl transferases group 1 RG53_RS10160 PF00293 NUDIX domain RG53_RS10165 PF01370 NAD dependent epimerase/dehydratase family RG53_RS10170 PF16363 GDP-mannose 4,6 dehydratase RG53_RS10175 PF00132 Bacterial transferase hexapeptide (six repeats) RG53_RS10180 PF00535 Glycosyl transferase family 2 RG53_RS10190 PF13439 Glycosyltransferase Family 4 RG53_RS10190 PF00534 Glycosyl transferases group 1 RG53_RS10195 PF00132 Bacterial transferase hexapeptide (six repeats) RG53_RS10200 PF00535 Glycosyl transferase family 2 RG53_RS10205 PF13807 G-rich domain on putative tyrosine kinase RG53_RS10205 PF13614 AAA domain RG53_RS10205 PF02706 Chain length determinant protein RG53_RS10210 PF01451 Low molecular weight phosphotyrosine protein phosphatase RG53_RS10215 PF18412 Outer-membrane lipoprotein Wza C-terminal domain RG53_RS10215 PF10531 SLBB domain RG53_RS10215 PF02563 Polysaccharide biosynthesis/export protein RG53_RS10220 PF03471 Transporter associated domain RG53_RS10220 PF00571 CBS domain RG53_RS10220 PF03741 Integral membrane protein TerC family RG53_RS10230 PF05170 AsmA family RG53_RS10235 PF00692 dUTPase RG53_RS10240 PF00485 Phosphoribulokinase / Uridine kinase family RG53_RS10245 PF08448 PAS fold RG53_RS10245 PF08447 PAS fold RG53_RS10245 PF05231 MASE1 RG53_RS10245 PF00563 EAL domain RG53_RS10245 PF00990 Diguanylate cyclase, GGDEF domain RG53_RS10245 PF13426 PAS domain RG53_RS10250 PF06029 AlkA N-terminal domain RG53_RS10250 PF00730 HhH-GPD superfamily base excision DNA repair protein RG53_RS10255 PF00012 Hsp70 protein RG53_RS10270 PF00092 von Willebrand factor type A domain RG53_RS10285 PF13533 Biotin-lipoyl like RG53_RS10290 PF00873 AcrB/AcrD/AcrF family RG53_RS10295 PF00873 AcrB/AcrD/AcrF family RG53_RS10300 PF07690 Major Facilitator Superfamily RG53_RS10305 PF00512 His Kinase A (phospho-acceptor) domain RG53_RS10305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG53_RS10305 PF00672 HAMP domain RG53_RS10310 PF00486 Transcriptional regulatory protein, C terminal RG53_RS10310 PF00072 Response regulator receiver domain RG53_RS10320 PF07411 Domain of unknown function (DUF1508) RG53_RS10325 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH RG53_RS10335 PF16325 Peptidase family U32 C-terminal domain RG53_RS10335 PF01136 Peptidase family U32 RG53_RS10340 PF04606 Ogr/Delta-like zinc finger RG53_RS10385 PF02413 Caudovirales tail fibre assembly protein, lambda gpK RG53_RS10390 PF07484 Phage Tail Collar Domain RG53_RS10390 PF08400 Prophage tail fibre N-terminal RG53_RS10390 PF03335 Phage tail fibre repeat RG53_RS10390 PF07484 Phage Tail Collar Domain RG53_RS10390 PF08400 Prophage tail fibre N-terminal RG53_RS10390 PF03335 Phage tail fibre repeat RG53_RS10495 PF05840 Bacteriophage replication gene A protein (GPA) RG53_RS10535 PF02899 Phage integrase, N-terminal SAM-like domain RG53_RS10535 PF00589 Phage integrase family RG53_RS10550 PF00781 Diacylglycerol kinase catalytic domain RG53_RS10555 PF08220 DeoR-like helix-turn-helix domain RG53_RS10560 PF08240 Alcohol dehydrogenase GroES-like domain RG53_RS10560 PF00107 Zinc-binding dehydrogenase RG53_RS10565 PF03611 PTS system sugar-specific permease component RG53_RS10570 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RG53_RS10575 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RG53_RS10580 PF08013 Tagatose 6 phosphate kinase RG53_RS10585 PF01116 Fructose-bisphosphate aldolase class-II RG53_RS10595 PF01791 DeoC/LacD family aldolase RG53_RS10600 PF03825 Nucleoside H+ symporter RG53_RS10605 PF03747 ADP-ribosylglycohydrolase RG53_RS10610 PF00294 pfkB family carbohydrate kinase RG53_RS10615 PF07702 UTRA domain RG53_RS10615 PF00392 Bacterial regulatory proteins, gntR family RG53_RS10620 PF01183 Glycosyl hydrolases family 25 RG53_RS10625 PF08543 Phosphomethylpyrimidine kinase RG53_RS10630 PF02110 Hydroxyethylthiazole kinase family RG53_RS10635 PF02583 Metal-sensitive transcriptional repressor RG53_RS10640 PF03824 High-affinity nickel-transport protein RG53_RS10645 PF11776 Nickel/cobalt transporter regulator RG53_RS10650 PF00419 Fimbrial protein RG53_RS10655 PF00577 Outer membrane usher protein RG53_RS10655 PF13953 PapC C-terminal domain RG53_RS10655 PF13954 PapC N-terminal domain RG53_RS10660 PF02753 Pili assembly chaperone PapD, C-terminal domain RG53_RS10660 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RG53_RS10665 PF00419 Fimbrial protein RG53_RS10675 PF10836 Protein of unknown function (DUF2574) RG53_RS10680 PF10609 NUBPL iron-transfer P-loop NTPase RG53_RS10685 PF09334 tRNA synthetases class I (M) RG53_RS10685 PF01588 Putative tRNA binding domain RG53_RS10690 PF13569 Domain of unknown function (DUF4132) RG53_RS10695 PF13569 Domain of unknown function (DUF4132) RG53_RS10715 PF07728 AAA domain (dynein-related subfamily) RG53_RS10725 PF05762 VWA domain containing CoxE-like protein RG53_RS10730 PF04434 SWIM zinc finger RG53_RS10735 PF06998 Protein of unknown function (DUF1307) RG53_RS10740 PF07308 Protein of unknown function (DUF1456) RG53_RS10745 PF04397 LytTr DNA-binding domain RG53_RS10745 PF00072 Response regulator receiver domain RG53_RS10750 PF07694 5TMR of 5TMR-LYT RG53_RS10750 PF06580 Histidine kinase RG53_RS10755 PF13411 MerR HTH family regulatory protein RG53_RS10765 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS10770 PF00005 ABC transporter RG53_RS10775 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS10780 PF04069 Substrate binding domain of ABC-type glycine betaine transport system RG53_RS10785 PF01915 Glycosyl hydrolase family 3 C-terminal domain RG53_RS10785 PF14310 Fibronectin type III-like domain RG53_RS10785 PF00933 Glycosyl hydrolase family 3 N terminal domain RG53_RS10790 PF01565 FAD binding domain RG53_RS10790 PF09330 D-lactate dehydrogenase, membrane binding RG53_RS10795 PF00768 D-alanyl-D-alanine carboxypeptidase RG53_RS10800 PF04893 Yip1 domain RG53_RS10805 PF09335 SNARE associated Golgi protein RG53_RS10815 PF02321 Outer membrane efflux protein RG53_RS10830 PF01207 Dihydrouridine synthase (Dus) RG53_RS10835 PF03788 LrgA family RG53_RS10840 PF04172 LrgB-like family RG53_RS10845 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RG53_RS10845 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region RG53_RS10850 PF02698 DUF218 domain RG53_RS10855 PF10808 Protein of unknown function (DUF2542) RG53_RS10860 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RG53_RS10860 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG53_RS10865 PF01180 Dihydroorotate dehydrogenase RG53_RS10870 PF02653 Branched-chain amino acid transport system / permease component RG53_RS10875 PF00005 ABC transporter RG53_RS10880 PF13407 Periplasmic binding protein domain RG53_RS10885 PF00356 Bacterial regulatory proteins, lacI family RG53_RS10895 PF04235 Protein of unknown function (DUF418) RG53_RS10900 PF01227 GTP cyclohydrolase I RG53_RS10910 PF00756 Putative esterase RG53_RS10915 PF00593 TonB dependent receptor RG53_RS10915 PF07715 TonB-dependent Receptor Plug Domain RG53_RS10925 PF00324 Amino acid permease RG53_RS10935 PF03466 LysR substrate binding domain RG53_RS10935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG53_RS10940 PF03601 Conserved hypothetical protein 698 RG53_RS10945 PF01261 Xylose isomerase-like TIM barrel RG53_RS10950 PF00294 pfkB family carbohydrate kinase RG53_RS10955 PF07662 Na+ dependent nucleoside transporter C-terminus RG53_RS10955 PF01773 Na+ dependent nucleoside transporter N-terminus RG53_RS10960 PF01156 Inosine-uridine preferring nucleoside hydrolase RG53_RS10965 PF00027 Cyclic nucleotide-binding domain RG53_RS10970 PF07662 Na+ dependent nucleoside transporter C-terminus RG53_RS10970 PF01773 Na+ dependent nucleoside transporter N-terminus RG53_RS10975 PF04227 Indigoidine synthase A like protein RG53_RS10980 PF00294 pfkB family carbohydrate kinase RG53_RS10985 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RG53_RS10985 PF02378 Phosphotransferase system, EIIC RG53_RS10990 PF00294 pfkB family carbohydrate kinase RG53_RS10995 PF00381 PTS HPr component phosphorylation site RG53_RS10995 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RG53_RS11000 PF07690 Major Facilitator Superfamily RG53_RS11005 PF03692 Putative zinc- or iron-chelating domain RG53_RS11010 PF09285 Elongation factor P, C-terminal RG53_RS11010 PF08207 Elongation factor P (EF-P) KOW-like domain RG53_RS11010 PF01132 Elongation factor P (EF-P) OB domain RG53_RS11015 PF01232 Mannitol dehydrogenase Rossmann domain RG53_RS11015 PF08125 Mannitol dehydrogenase C-terminal domain RG53_RS11020 PF07683 Cobalamin synthesis protein cobW C-terminal domain RG53_RS11020 PF02492 CobW/HypB/UreG, nucleotide-binding domain RG53_RS11025 PF01569 PAP2 superfamily RG53_RS11030 PF00877 NlpC/P60 family RG53_RS11035 PF00563 EAL domain RG53_RS11035 PF12792 CSS motif domain associated with EAL RG53_RS11040 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RG53_RS11045 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS11050 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS11050 PF12911 N-terminal TM domain of oligopeptide transport permease C RG53_RS11055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RG53_RS11055 PF00005 ABC transporter RG53_RS11060 PF13989 YejG-like protein RG53_RS11070 PF07690 Major Facilitator Superfamily RG53_RS11075 PF00849 RNA pseudouridylate synthase RG53_RS11075 PF01479 S4 domain RG53_RS11085 PF04851 Type III restriction enzyme, res subunit RG53_RS11085 PF00271 Helicase conserved C-terminal domain RG53_RS11090 PF01386 Ribosomal L25p family RG53_RS11095 PF04245 37-kD nucleoid-associated bacterial protein RG53_RS11100 PF07208 Protein of unknown function (DUF1414) RG53_RS11105 PF11893 Domain of unknown function (DUF3413) RG53_RS11105 PF00884 Sulfatase RG53_RS11125 PF00196 Bacterial regulatory proteins, luxR family RG53_RS11125 PF00072 Response regulator receiver domain RG53_RS11130 PF03918 Cytochrome C biogenesis protein RG53_RS11135 PF08534 Redoxin RG53_RS11140 PF01578 Cytochrome C assembly protein RG53_RS11140 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal RG53_RS11145 PF03100 CcmE RG53_RS11150 PF04995 Heme exporter protein D (CcmD) RG53_RS11155 PF01578 Cytochrome C assembly protein RG53_RS11160 PF03379 CcmB protein RG53_RS11165 PF00005 ABC transporter RG53_RS11170 PF03264 NapC/NirT cytochrome c family, N-terminal region RG53_RS11175 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) RG53_RS11180 PF12801 4Fe-4S binding domain RG53_RS11180 PF13237 4Fe-4S dicluster domain RG53_RS11185 PF12838 4Fe-4S dicluster domain RG53_RS11185 PF12800 4Fe-4S binding domain RG53_RS11190 PF00384 Molybdopterin oxidoreductase RG53_RS11190 PF01568 Molydopterin dinucleotide binding domain RG53_RS11190 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RG53_RS11195 PF03927 NapD protein RG53_RS11200 PF00037 4Fe-4S binding domain RG53_RS11200 PF13187 4Fe-4S dicluster domain RG53_RS11200 PF12800 4Fe-4S binding domain RG53_RS11210 PF03974 Ecotin RG53_RS11215 PF06039 Malate:quinone oxidoreductase (Mqo) RG53_RS11220 PF00005 ABC transporter RG53_RS11225 PF13532 2OG-Fe(II) oxygenase superfamily RG53_RS11230 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RG53_RS11230 PF12833 Helix-turn-helix domain RG53_RS11230 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RG53_RS11230 PF02805 Metal binding domain of Ada RG53_RS11235 PF02424 ApbE family RG53_RS11240 PF00267 Gram-negative porin RG53_RS11255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG53_RS11255 PF01627 Hpt domain RG53_RS11255 PF16359 RcsD-ABL domain RG53_RS11260 PF00196 Bacterial regulatory proteins, luxR family RG53_RS11260 PF00072 Response regulator receiver domain RG53_RS11270 PF00512 His Kinase A (phospho-acceptor) domain RG53_RS11270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG53_RS11270 PF09456 RcsC Alpha-Beta-Loop (ABL) RG53_RS11270 PF00072 Response regulator receiver domain RG53_RS11275 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) RG53_RS11280 PF10062 Predicted secreted protein (DUF2300) RG53_RS11280 PF08486 Stage II sporulation protein RG53_RS11285 PF00207 Alpha-2-macroglobulin family RG53_RS11285 PF07703 Alpha-2-macroglobulin bait region domain RG53_RS11285 PF01835 MG2 domain RG53_RS11290 PF06672 Protein of unknown function (DUF1175) RG53_RS11295 PF09909 Uncharacterized protein conserved in bacteria (DUF2138) RG53_RS11300 PF03989 DNA gyrase C-terminal domain, beta-propeller RG53_RS11300 PF00521 DNA gyrase/topoisomerase IV, subunit A RG53_RS11310 PF12951 Passenger-associated-transport-repeat RG53_RS11310 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat RG53_RS11310 PF03797 Autotransporter beta-domain RG53_RS11320 PF03477 ATP cone domain RG53_RS11320 PF02867 Ribonucleotide reductase, barrel domain RG53_RS11320 PF00317 Ribonucleotide reductase, all-alpha domain RG53_RS11325 PF00268 Ribonucleotide reductase, small chain RG53_RS11330 PF00111 2Fe-2S iron-sulfur cluster binding domain RG53_RS11350 PF03009 Glycerophosphoryl diester phosphodiesterase family RG53_RS11355 PF07690 Major Facilitator Superfamily RG53_RS11365 PF04324 BFD-like [2Fe-2S] binding domain RG53_RS11365 PF01266 FAD dependent oxidoreductase RG53_RS11370 PF00890 FAD binding domain RG53_RS11375 PF13183 4Fe-4S dicluster domain RG53_RS11375 PF02754 Cysteine-rich domain RG53_RS11380 PF04754 Putative transposase, YhgA-like RG53_RS11385 PF03328 HpcH/HpaI aldolase/citrate lyase family RG53_RS11390 PF00994 Probable molybdopterin binding domain RG53_RS11395 PF07437 YfaZ precursor RG53_RS11400 PF00293 NUDIX domain RG53_RS11405 PF00300 Histidine phosphatase superfamily (branch 1) RG53_RS11410 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RG53_RS11415 PF00535 Glycosyl transferase family 2 RG53_RS11420 PF00551 Formyl transferase RG53_RS11420 PF02911 Formyl transferase, C-terminal domain RG53_RS11420 PF01370 NAD dependent epimerase/dehydratase family RG53_RS11425 PF01522 Polysaccharide deacetylase RG53_RS11430 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase RG53_RS11435 PF00892 EamA-like transporter family RG53_RS11450 PF13193 AMP-binding enzyme C-terminal domain RG53_RS11450 PF00501 AMP-binding enzyme RG53_RS11455 PF13378 Enolase C-terminal domain-like RG53_RS11460 PF00378 Enoyl-CoA hydratase/isomerase RG53_RS11465 PF12697 Alpha/beta hydrolase family RG53_RS11470 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RG53_RS11470 PF16582 Middle domain of thiamine pyrophosphate RG53_RS11470 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RG53_RS11475 PF00425 chorismate binding enzyme RG53_RS11480 PF05957 Bacterial protein of unknown function (DUF883) RG53_RS11485 PF13673 Acetyltransferase (GNAT) domain RG53_RS11490 PF12706 Beta-lactamase superfamily domain RG53_RS11505 PF08974 Domain of unknown function (DUF1877) RG53_RS11510 PF00361 Proton-conducting membrane transporter RG53_RS11515 PF00361 Proton-conducting membrane transporter RG53_RS11520 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RG53_RS11520 PF00361 Proton-conducting membrane transporter RG53_RS11525 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RG53_RS11530 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 RG53_RS11535 PF12838 4Fe-4S dicluster domain RG53_RS11540 PF00146 NADH dehydrogenase RG53_RS11545 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RG53_RS11545 PF01568 Molydopterin dinucleotide binding domain RG53_RS11545 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RG53_RS11545 PF00384 Molybdopterin oxidoreductase RG53_RS11550 PF10531 SLBB domain RG53_RS11550 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RG53_RS11550 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit RG53_RS11560 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit RG53_RS11560 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit RG53_RS11565 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RG53_RS11570 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 RG53_RS11575 PF03466 LysR substrate binding domain RG53_RS11575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG53_RS11585 PF00155 Aminotransferase class I and II RG53_RS11595 PF03600 Citrate transporter RG53_RS11595 PF02080 TrkA-C domain RG53_RS11600 PF13419 Haloacid dehalogenase-like hydrolase RG53_RS11605 PF03887 YfbU domain RG53_RS11610 PF04217 Protein of unknown function, DUF412 RG53_RS11620 PF00871 Acetokinase family RG53_RS11625 PF07085 DRTGG domain RG53_RS11625 PF01515 Phosphate acetyl/butaryl transferase RG53_RS11630 PF03606 C4-dicarboxylate anaerobic carrier RG53_RS11635 PF00293 NUDIX domain RG53_RS11640 PF12850 Calcineurin-like phosphoesterase superfamily domain RG53_RS11645 PF14834 Glutathione S-transferase, C-terminal domain RG53_RS11645 PF02798 Glutathione S-transferase, N-terminal domain RG53_RS11650 PF00043 Glutathione S-transferase, C-terminal domain RG53_RS11650 PF02798 Glutathione S-transferase, N-terminal domain RG53_RS11655 PF02152 Dihydroneopterin aldolase RG53_RS11660 PF08338 Domain of unknown function (DUF1731) RG53_RS11660 PF01370 NAD dependent epimerase/dehydratase family RG53_RS11665 PF04754 Putative transposase, YhgA-like RG53_RS11670 PF00005 ABC transporter RG53_RS11675 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS11680 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS11685 PF00497 Bacterial extracellular solute-binding proteins, family 3 RG53_RS11690 PF00497 Bacterial extracellular solute-binding proteins, family 3 RG53_RS11695 PF02441 Flavoprotein RG53_RS11700 PF00156 Phosphoribosyl transferase domain RG53_RS11705 PF02674 Colicin V production protein RG53_RS11710 PF05036 Sporulation related domain RG53_RS11715 PF02875 Mur ligase family, glutamate ligase domain RG53_RS11715 PF08245 Mur ligase middle domain RG53_RS11720 PF17848 Acetyl-coA carboxylase zinc finger domain RG53_RS11720 PF01039 Carboxyl transferase domain RG53_RS11725 PF09335 SNARE associated Golgi protein RG53_RS11730 PF01416 tRNA pseudouridine synthase RG53_RS11735 PF01118 Semialdehyde dehydrogenase, NAD binding domain RG53_RS11735 PF02774 Semialdehyde dehydrogenase, dimerisation domain RG53_RS11740 PF11890 Domain of unknown function (DUF3410) RG53_RS11740 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RG53_RS11740 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RG53_RS11750 PF07690 Major Facilitator Superfamily RG53_RS11760 PF00109 Beta-ketoacyl synthase, N-terminal domain RG53_RS11760 PF02801 Beta-ketoacyl synthase, C-terminal domain RG53_RS11765 PF01266 FAD dependent oxidoreductase RG53_RS11765 PF05430 S-adenosyl-L-methionine-dependent methyltransferase RG53_RS11770 PF02371 Transposase IS116/IS110/IS902 family RG53_RS11770 PF01548 Transposase RG53_RS11775 PF08891 YfcL protein RG53_RS11780 PF04315 Elongation factor P hydroxylase RG53_RS11785 PF01925 Sulfite exporter TauE/SafE RG53_RS11790 PF03411 Penicillin-insensitive murein endopeptidase RG53_RS11795 PF01264 Chorismate synthase RG53_RS11800 PF05175 Methyltransferase small domain RG53_RS11805 PF01713 Smr domain RG53_RS11810 PF11245 Protein of unknown function (DUF2544) RG53_RS11815 PF00419 Fimbrial protein RG53_RS11820 PF00419 Fimbrial protein RG53_RS11825 PF00419 Fimbrial protein RG53_RS11830 PF02753 Pili assembly chaperone PapD, C-terminal domain RG53_RS11830 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RG53_RS11835 PF13953 PapC C-terminal domain RG53_RS11835 PF13954 PapC N-terminal domain RG53_RS11835 PF00577 Outer membrane usher protein RG53_RS11840 PF00419 Fimbrial protein RG53_RS11845 PF00300 Histidine phosphatase superfamily (branch 1) RG53_RS11850 PF00378 Enoyl-CoA hydratase/isomerase RG53_RS11850 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RG53_RS11850 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RG53_RS11855 PF00108 Thiolase, N-terminal domain RG53_RS11855 PF02803 Thiolase, C-terminal domain RG53_RS11860 PF04175 Protein of unknown function (DUF406) RG53_RS11870 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) RG53_RS11885 PF04333 MlaA lipoprotein RG53_RS11890 PF01226 Formate/nitrite transporter RG53_RS11905 PF01306 LacY proton/sugar symporter RG53_RS11910 PF00294 pfkB family carbohydrate kinase RG53_RS11915 PF00251 Glycosyl hydrolases family 32 N-terminal domain RG53_RS11915 PF08244 Glycosyl hydrolases family 32 C terminal RG53_RS11920 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RG53_RS11920 PF00356 Bacterial regulatory proteins, lacI family RG53_RS11925 PF02447 GntP family permease RG53_RS11930 PF00291 Pyridoxal-phosphate dependent enzyme RG53_RS11935 PF07690 Major Facilitator Superfamily RG53_RS11940 PF00529 HlyD membrane-fusion protein of T1SS RG53_RS11940 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RG53_RS11945 PF00072 Response regulator receiver domain RG53_RS11945 PF00196 Bacterial regulatory proteins, luxR family RG53_RS11950 PF00072 Response regulator receiver domain RG53_RS11950 PF00512 His Kinase A (phospho-acceptor) domain RG53_RS11950 PF00497 Bacterial extracellular solute-binding proteins, family 3 RG53_RS11950 PF01627 Hpt domain RG53_RS11950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG53_RS11955 PF02515 CoA-transferase family III RG53_RS11960 PF03547 Membrane transport protein RG53_RS11965 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RG53_RS11965 PF00205 Thiamine pyrophosphate enzyme, central domain RG53_RS11965 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RG53_RS11970 PF02515 CoA-transferase family III RG53_RS11975 PF10938 YfdX protein RG53_RS11990 PF10810 Protein of unknown function (DUF2545) RG53_RS11995 PF03279 Bacterial lipid A biosynthesis acyltransferase RG53_RS12005 PF00155 Aminotransferase class I and II RG53_RS12010 PF07694 5TMR of 5TMR-LYT RG53_RS12010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG53_RS12010 PF06580 Histidine kinase RG53_RS12015 PF00072 Response regulator receiver domain RG53_RS12015 PF04397 LytTr DNA-binding domain RG53_RS12020 PF12833 Helix-turn-helix domain RG53_RS12025 PF00381 PTS HPr component phosphorylation site RG53_RS12025 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RG53_RS12025 PF00391 PEP-utilising enzyme, mobile domain RG53_RS12025 PF02896 PEP-utilising enzyme, TIM barrel domain RG53_RS12025 PF05524 PEP-utilising enzyme, N-terminal RG53_RS12030 PF05343 M42 glutamyl aminopeptidase RG53_RS12035 PF01321 Creatinase/Prolidase N-terminal domain RG53_RS12035 PF00557 Metallopeptidase family M24 RG53_RS12040 PF02378 Phosphotransferase system, EIIC RG53_RS12045 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RG53_RS12050 PF02685 Glucokinase RG53_RS12055 PF00654 Voltage gated chloride channel RG53_RS12060 PF10697 Protein of unknown function (DUF2502) RG53_RS12070 PF01566 Natural resistance-associated macrophage protein RG53_RS12075 PF07670 Nucleoside recognition RG53_RS12075 PF07662 Na+ dependent nucleoside transporter C-terminus RG53_RS12075 PF01773 Na+ dependent nucleoside transporter N-terminus RG53_RS12080 PF00563 EAL domain RG53_RS12080 PF05231 MASE1 RG53_RS12095 PF07037 Putative transcription regulator (DUF1323) RG53_RS12100 PF07037 Putative transcription regulator (DUF1323) RG53_RS12105 PF00749 tRNA synthetases class I (E and Q), catalytic domain RG53_RS12135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG53_RS12135 PF03466 LysR substrate binding domain RG53_RS12140 PF13593 SBF-like CPA transporter family (DUF4137) RG53_RS12145 PF12843 Putative quorum-sensing-regulated virulence factor RG53_RS12150 PF12826 Helix-hairpin-helix motif RG53_RS12150 PF00533 BRCA1 C Terminus (BRCT) domain RG53_RS12150 PF03120 NAD-dependent DNA ligase OB-fold domain RG53_RS12150 PF01653 NAD-dependent DNA ligase adenylation domain RG53_RS12150 PF03119 NAD-dependent DNA ligase C4 zinc finger domain RG53_RS12155 PF04354 ZipA, C-terminal FtsZ-binding domain RG53_RS12170 PF00291 Pyridoxal-phosphate dependent enzyme RG53_RS12175 PF00381 PTS HPr component phosphorylation site RG53_RS12180 PF05524 PEP-utilising enzyme, N-terminal RG53_RS12180 PF00391 PEP-utilising enzyme, mobile domain RG53_RS12180 PF02896 PEP-utilising enzyme, TIM barrel domain RG53_RS12185 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RG53_RS12190 PF08543 Phosphomethylpyrimidine kinase RG53_RS12195 PF17263 Family of unknown function (DUF5329) RG53_RS12200 PF00291 Pyridoxal-phosphate dependent enzyme RG53_RS12205 PF00005 ABC transporter RG53_RS12210 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS12215 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS12230 PF01418 Helix-turn-helix domain, rpiR family RG53_RS12230 PF01380 SIS domain RG53_RS12235 PF01380 SIS domain RG53_RS12240 PF00367 phosphotransferase system, EIIB RG53_RS12240 PF02378 Phosphotransferase system, EIIC RG53_RS12245 PF00144 Beta-lactamase RG53_RS12250 PF04261 Dyp-type peroxidase family RG53_RS12255 PF06572 Protein of unknown function (DUF1131) RG53_RS12260 PF11143 Protein of unknown function (DUF2919) RG53_RS12265 PF00583 Acetyltransferase (GNAT) family RG53_RS12270 PF01520 N-acetylmuramoyl-L-alanine amidase RG53_RS12275 PF01218 Coproporphyrinogen III oxidase RG53_RS12280 PF12833 Helix-turn-helix domain RG53_RS12285 PF16365 Ethanolamine utilization protein EutK C-terminus RG53_RS12285 PF00936 BMC domain RG53_RS12290 PF00936 BMC domain RG53_RS12295 PF05985 Ethanolamine ammonia-lyase light chain (EutC) RG53_RS12300 PF06751 Ethanolamine ammonia lyase large subunit (EutB) RG53_RS12305 PF06277 Ethanolamine utilisation protein EutA RG53_RS12310 PF04346 Ethanolamine utilisation protein, EutH RG53_RS12315 PF00465 Iron-containing alcohol dehydrogenase RG53_RS12325 PF00171 Aldehyde dehydrogenase family RG53_RS12330 PF03319 Ethanolamine utilisation protein EutN/carboxysome RG53_RS12335 PF00936 BMC domain RG53_RS12340 PF01515 Phosphate acetyl/butaryl transferase RG53_RS12345 PF01923 Cobalamin adenosyltransferase RG53_RS12350 PF06249 Ethanolamine utilisation protein EutQ RG53_RS12355 PF10662 Ethanolamine utilisation - propanediol utilisation RG53_RS12360 PF00936 BMC domain RG53_RS12365 PF00390 Malic enzyme, N-terminal domain RG53_RS12365 PF03949 Malic enzyme, NAD binding domain RG53_RS12365 PF01515 Phosphate acetyl/butaryl transferase RG53_RS12370 PF00923 Transaldolase/Fructose-6-phosphate aldolase RG53_RS12375 PF02779 Transketolase, pyrimidine binding domain RG53_RS12375 PF02780 Transketolase, C-terminal domain RG53_RS12375 PF00456 Transketolase, thiamine diphosphate binding domain RG53_RS12380 PF06674 Protein of unknown function (DUF1176) RG53_RS12385 PF00293 NUDIX domain RG53_RS12390 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG53_RS12390 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RG53_RS12390 PF13247 4Fe-4S dicluster domain RG53_RS12395 PF00672 HAMP domain RG53_RS12395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG53_RS12395 PF07730 Histidine kinase RG53_RS12395 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term RG53_RS12400 PF00873 AcrB/AcrD/AcrF family RG53_RS12415 PF03960 ArsC family RG53_RS12420 PF07687 Peptidase dimerisation domain RG53_RS12420 PF01546 Peptidase family M20/M25/M40 RG53_RS12425 PF13980 Uncharacterised protein family (UPF0370) RG53_RS12430 PF02230 Phospholipase/Carboxylesterase RG53_RS12435 PF13718 GNAT acetyltransferase 2 RG53_RS12435 PF05127 Helicase RG53_RS12435 PF17176 tRNA-binding domain RG53_RS12435 PF08351 Domain of unknown function (DUF1726) RG53_RS12440 PF04228 Putative neutral zinc metallopeptidase RG53_RS12445 PF01850 PIN domain RG53_RS12450 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin RG53_RS12455 PF01259 SAICAR synthetase RG53_RS12465 PF06804 NlpB/DapX lipoprotein RG53_RS12470 PF00701 Dihydrodipicolinate synthetase family RG53_RS12475 PF01842 ACT domain RG53_RS12480 PF00578 AhpC/TSA family RG53_RS12485 PF12798 4Fe-4S binding domain RG53_RS12485 PF00037 4Fe-4S binding domain RG53_RS12490 PF00361 Proton-conducting membrane transporter RG53_RS12495 PF00146 NADH dehydrogenase RG53_RS12500 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RG53_RS12500 PF00361 Proton-conducting membrane transporter RG53_RS12510 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RG53_RS12515 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RG53_RS12515 PF00361 Proton-conducting membrane transporter RG53_RS12520 PF00374 Nickel-dependent hydrogenase RG53_RS12520 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit RG53_RS12520 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit RG53_RS12525 PF12838 4Fe-4S dicluster domain RG53_RS12530 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RG53_RS12535 PF07450 Formate hydrogenlyase maturation protein HycH RG53_RS12540 PF01590 GAF domain RG53_RS12540 PF00158 Sigma-54 interaction domain RG53_RS12545 PF01226 Formate/nitrite transporter RG53_RS12550 PF01594 AI-2E family transporter RG53_RS12555 PF01435 Peptidase family M48 RG53_RS12560 PF03960 ArsC family RG53_RS12565 PF00308 Bacterial dnaA protein RG53_RS12570 PF00860 Permease family RG53_RS12585 PF00586 AIR synthase related protein, N-terminal domain RG53_RS12585 PF02769 AIR synthase related protein, C-terminal domain RG53_RS12590 PF00551 Formyl transferase RG53_RS12595 PF13089 Polyphosphate kinase N-terminal domain RG53_RS12595 PF02503 Polyphosphate kinase middle domain RG53_RS12595 PF13090 Polyphosphate kinase C-terminal domain 2 RG53_RS12595 PF17941 Polyphosphate kinase C-terminal domain 1 RG53_RS12600 PF02541 Ppx/GppA phosphatase family RG53_RS12605 PF05231 MASE1 RG53_RS12605 PF00563 EAL domain RG53_RS12615 PF11119 Protein of unknown function (DUF2633) RG53_RS12625 PF05433 Glycine zipper 2TM domain RG53_RS12630 PF17358 Family of unknown function (DUF5384) RG53_RS12635 PF00958 GMP synthase C terminal domain RG53_RS12635 PF02540 NAD synthase RG53_RS12635 PF00117 Glutamine amidotransferase class-I RG53_RS12640 PF00571 CBS domain RG53_RS12640 PF00478 IMP dehydrogenase / GMP reductase domain RG53_RS12645 PF13742 OB-fold nucleic acid binding domain RG53_RS12645 PF02601 Exonuclease VII, large subunit RG53_RS12650 PF07191 zinc-ribbons RG53_RS12655 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal RG53_RS12655 PF01926 50S ribosome-binding GTPase RG53_RS12660 PF13360 PQQ-like domain RG53_RS12665 PF09976 Tetratricopeptide repeat-like domain RG53_RS12670 PF13393 Histidyl-tRNA synthetase RG53_RS12670 PF03129 Anticodon binding domain RG53_RS12675 PF04551 GcpE protein RG53_RS12680 PF13464 Domain of unknown function (DUF4115) RG53_RS12685 PF04055 Radical SAM superfamily RG53_RS12690 PF00334 Nucleoside diphosphate kinase RG53_RS12695 PF00912 Transglycosylase RG53_RS12695 PF00905 Penicillin binding protein transpeptidase domain RG53_RS12695 PF06832 Penicillin-Binding Protein C-terminus Family RG53_RS12700 PF01835 MG2 domain RG53_RS12700 PF17962 Bacterial macroglobulin domain 6 RG53_RS12700 PF07703 Alpha-2-macroglobulin bait region domain RG53_RS12700 PF11974 Bacterial alpha-2-macroglobulin MG3 domain RG53_RS12700 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain RG53_RS12700 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain RG53_RS12700 PF00207 Alpha-2-macroglobulin family RG53_RS12700 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain RG53_RS12700 PF07678 A-macroglobulin TED domain RG53_RS12705 PF00581 Rhodanese-like domain RG53_RS12710 PF07179 SseB protein N-terminal domain RG53_RS12710 PF14581 SseB protein C-terminal domain RG53_RS12715 PF12404 Peptidase RG53_RS12715 PF00883 Cytosol aminopeptidase family, catalytic domain RG53_RS12720 PF04384 Iron-sulphur cluster assembly RG53_RS12725 PF00111 2Fe-2S iron-sulfur cluster binding domain RG53_RS12730 PF00012 Hsp70 protein RG53_RS12735 PF07743 HSCB C-terminal oligomerisation domain RG53_RS12740 PF01521 Iron-sulphur cluster biosynthesis RG53_RS12745 PF01592 NifU-like N terminal domain RG53_RS12750 PF00266 Aminotransferase class-V RG53_RS12755 PF02082 Transcriptional regulator RG53_RS12760 PF00588 SpoU rRNA Methylase family RG53_RS12765 PF00459 Inositol monophosphatase family RG53_RS12770 PF12146 Serine aminopeptidase, S33 RG53_RS12775 PF00874 PRD domain RG53_RS12780 PF12832 MFS_1 like family RG53_RS12785 PF03466 LysR substrate binding domain RG53_RS12785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG53_RS12790 PF00848 Ring hydroxylating alpha subunit (catalytic domain) RG53_RS12790 PF00355 Rieske [2Fe-2S] domain RG53_RS12795 PF00866 Ring hydroxylating beta subunit RG53_RS12800 PF00355 Rieske [2Fe-2S] domain RG53_RS12805 PF00106 short chain dehydrogenase RG53_RS12810 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG53_RS12810 PF14759 Reductase C-terminal RG53_RS12815 PF07681 DoxX RG53_RS12820 PF01263 Aldose 1-epimerase RG53_RS12825 PF00107 Zinc-binding dehydrogenase RG53_RS12825 PF08240 Alcohol dehydrogenase GroES-like domain RG53_RS12830 PF02653 Branched-chain amino acid transport system / permease component RG53_RS12835 PF00005 ABC transporter RG53_RS12840 PF13407 Periplasmic binding protein domain RG53_RS12845 PF13181 Tetratricopeptide repeat RG53_RS12845 PF17128 Domain of unknown function (DUF5107) RG53_RS12850 PF00480 ROK family RG53_RS12855 PF00464 Serine hydroxymethyltransferase RG53_RS12865 PF00970 Oxidoreductase FAD-binding domain RG53_RS12865 PF00175 Oxidoreductase NAD-binding domain RG53_RS12865 PF00042 Globin RG53_RS12870 PF00543 Nitrogen regulatory protein P-II RG53_RS12875 PF00158 Sigma-54 interaction domain RG53_RS12875 PF00072 Response regulator receiver domain RG53_RS12880 PF13942 YfhG lipoprotein RG53_RS12885 PF00512 His Kinase A (phospho-acceptor) domain RG53_RS12885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG53_RS12890 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain RG53_RS12890 PF02769 AIR synthase related protein, C-terminal domain RG53_RS12890 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal RG53_RS12900 PF00497 Bacterial extracellular solute-binding proteins, family 3 RG53_RS12900 PF01464 Transglycosylase SLT domain RG53_RS12905 PF14437 MafB19-like deaminase RG53_RS12915 PF01380 SIS domain RG53_RS12915 PF01418 Helix-turn-helix domain, rpiR family RG53_RS12920 PF12838 4Fe-4S dicluster domain RG53_RS12940 PF01648 4'-phosphopantetheinyl transferase superfamily RG53_RS12945 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ RG53_RS12950 PF02565 Recombination protein O C terminal RG53_RS12950 PF11967 Recombination protein O N terminal RG53_RS12955 PF07650 KH domain RG53_RS12955 PF01926 50S ribosome-binding GTPase RG53_RS12960 PF14622 Ribonuclease-III-like RG53_RS12960 PF00035 Double-stranded RNA binding motif RG53_RS12970 PF10502 Signal peptidase, peptidase S26 RG53_RS12975 PF06421 GTP-binding protein LepA C-terminus RG53_RS12975 PF03144 Elongation factor Tu domain 2 RG53_RS12975 PF00009 Elongation factor Tu GTP binding domain RG53_RS12975 PF00679 Elongation factor G C-terminus RG53_RS12985 PF17188 MucB/RseB C-terminal domain RG53_RS12985 PF03888 MucB/RseB N-terminal domain RG53_RS12990 PF03872 Anti sigma-E protein RseA, N-terminal domain RG53_RS12990 PF03873 Anti sigma-E protein RseA, C-terminal domain RG53_RS12995 PF04542 Sigma-70 region 2 RG53_RS12995 PF08281 Sigma-70, region 4 RG53_RS13005 PF00890 FAD binding domain RG53_RS13005 PF02910 Fumarate reductase flavoprotein C-term RG53_RS13010 PF05175 Methyltransferase small domain RG53_RS13015 PF00270 DEAD/DEAH box helicase RG53_RS13015 PF00271 Helicase conserved C-terminal domain RG53_RS13020 PF03466 LysR substrate binding domain RG53_RS13020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG53_RS13025 PF01810 LysE type translocator RG53_RS13030 PF01228 Glycine radical RG53_RS13035 PF03167 Uracil DNA glycosylase superfamily RG53_RS13040 PF08032 RNA 2'-O ribose methyltransferase substrate binding RG53_RS13040 PF00588 SpoU rRNA Methylase family RG53_RS13045 PF00085 Thioredoxin RG53_RS13050 PF03942 DTW domain RG53_RS13055 PF13607 Succinyl-CoA ligase like flavodoxin domain RG53_RS13055 PF13380 CoA binding domain RG53_RS13055 PF00583 Acetyltransferase (GNAT) family RG53_RS13060 PF13091 PLD-like domain RG53_RS13065 PF10043 Predicted periplasmic lipoprotein (DUF2279) RG53_RS13070 PF00083 Sugar (and other) transporter RG53_RS13100 PF10431 C-terminal, D2-small domain, of ClpB protein RG53_RS13100 PF00004 ATPase family associated with various cellular activities (AAA) RG53_RS13100 PF02861 Clp amino terminal domain, pathogenicity island component RG53_RS13100 PF17871 AAA lid domain RG53_RS13100 PF07724 AAA domain (Cdc48 subfamily) RG53_RS13105 PF02578 Multi-copper polyphenol oxidoreductase laccase RG53_RS13110 PF00849 RNA pseudouridylate synthase RG53_RS13110 PF01479 S4 domain RG53_RS13115 PF13525 Outer membrane lipoprotein RG53_RS13125 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein RG53_RS13130 PF01817 Chorismate mutase type II RG53_RS13130 PF00800 Prephenate dehydratase RG53_RS13135 PF02153 Prephenate dehydrogenase RG53_RS13135 PF01817 Chorismate mutase type II RG53_RS13140 PF00793 DAHP synthetase I family RG53_RS13145 PF10973 Protein of unknown function (DUF2799) RG53_RS13150 PF13689 YfiR/HmsC-like RG53_RS13155 PF00990 Diguanylate cyclase, GGDEF domain RG53_RS13155 PF17152 Periplasmic sensor domain RG53_RS13160 PF00691 OmpA family RG53_RS13165 PF01245 Ribosomal protein L19 RG53_RS13170 PF01746 tRNA (Guanine-1)-methyltransferase RG53_RS13175 PF01782 RimM N-terminal domain RG53_RS13175 PF05239 PRC-barrel domain RG53_RS13180 PF00886 Ribosomal protein S16 RG53_RS13185 PF00448 SRP54-type protein, GTPase domain RG53_RS13185 PF02881 SRP54-type protein, helical bundle domain RG53_RS13185 PF02978 Signal peptide binding domain RG53_RS13190 PF01578 Cytochrome C assembly protein RG53_RS13195 PF01595 Cyclin M transmembrane N-terminal domain RG53_RS13195 PF03471 Transporter associated domain RG53_RS13195 PF00571 CBS domain RG53_RS13200 PF01025 GrpE RG53_RS13210 PF01513 ATP-NAD kinase RG53_RS13215 PF02463 RecF/RecN/SMC N terminal domain RG53_RS13220 PF04355 SmpA / OmlA family RG53_RS13225 PF03658 RnfH family Ubiquitin RG53_RS13230 PF03364 Polyketide cyclase / dehydrase and lipid transport RG53_RS13235 PF01668 SmpB protein RG53_RS13245 PF00589 Phage integrase family RG53_RS13245 PF13356 Arm DNA-binding domain RG53_RS13250 PF01527 Transposase RG53_RS13255 PF00665 Integrase core domain RG53_RS13255 PF13333 Integrase core domain RG53_RS13255 PF13276 HTH-like domain RG53_RS13270 PF13356 Arm DNA-binding domain RG53_RS13270 PF00589 Phage integrase family RG53_RS13275 PF13276 HTH-like domain RG53_RS13275 PF00665 Integrase core domain RG53_RS13275 PF13333 Integrase core domain RG53_RS13280 PF01527 Transposase RG53_RS13310 PF05930 Prophage CP4-57 regulatory protein (AlpA) RG53_RS13315 PF01926 50S ribosome-binding GTPase RG53_RS13320 PF01527 Transposase RG53_RS13325 PF00665 Integrase core domain RG53_RS13330 PF03212 Pertactin RG53_RS13330 PF03797 Autotransporter beta-domain RG53_RS13330 PF16168 Adhesin of bacterial autotransporter system, probable stalk RG53_RS13350 PF17621 Family of unknown function (DUF5508) RG53_RS13355 PF17612 Family of unknown function (DUF5507) RG53_RS13370 PF00128 Alpha amylase, catalytic domain RG53_RS13375 PF00128 Alpha amylase, catalytic domain RG53_RS13380 PF08943 CsiD RG53_RS13385 PF01266 FAD dependent oxidoreductase RG53_RS13390 PF00171 Aldehyde dehydrogenase family RG53_RS13395 PF00202 Aminotransferase class-III RG53_RS13400 PF00324 Amino acid permease RG53_RS13405 PF00392 Bacterial regulatory proteins, gntR family RG53_RS13405 PF07729 FCD domain RG53_RS13410 PF01476 LysM domain RG53_RS13410 PF04972 BON domain RG53_RS13415 PF01679 Proteolipid membrane potential modulator RG53_RS13420 PF01022 Bacterial regulatory protein, arsR family RG53_RS13425 PF11127 Protein of unknown function (DUF2892) RG53_RS13425 PF00581 Rhodanese-like domain RG53_RS13430 PF00816 H-NS histone family RG53_RS13435 PF06610 L-alanine exporter RG53_RS13440 PF09400 Protein of unknown function (DUF2002) RG53_RS13445 PF05957 Bacterial protein of unknown function (DUF883) RG53_RS13450 PF00462 Glutaredoxin RG53_RS13455 PF07972 NrdI Flavodoxin like RG53_RS13460 PF02867 Ribonucleotide reductase, barrel domain RG53_RS13460 PF00317 Ribonucleotide reductase, all-alpha domain RG53_RS13460 PF08343 Ribonucleotide reductase N-terminal RG53_RS13465 PF00268 Ribonucleotide reductase, small chain RG53_RS13470 PF00005 ABC transporter RG53_RS13470 PF00571 CBS domain RG53_RS13475 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS13480 PF04069 Substrate binding domain of ABC-type glycine betaine transport system RG53_RS13485 PF07690 Major Facilitator Superfamily RG53_RS13490 PF03591 AzlC protein RG53_RS13495 PF05437 Branched-chain amino acid transport protein (AzlD) RG53_RS13500 PF01047 MarR family RG53_RS13505 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RG53_RS13505 PF00529 HlyD membrane-fusion protein of T1SS RG53_RS13510 PF07690 Major Facilitator Superfamily RG53_RS13515 PF02664 S-Ribosylhomocysteinase (LuxS) RG53_RS13520 PF04262 Glutamate-cysteine ligase RG53_RS13525 PF09335 SNARE associated Golgi protein RG53_RS13530 PF13419 Haloacid dehalogenase-like hydrolase RG53_RS13560 PF02599 Global regulator protein family RG53_RS13565 PF02272 DHHA1 domain RG53_RS13565 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RG53_RS13565 PF01411 tRNA synthetases class II (A) RG53_RS13575 PF02631 RecX family RG53_RS13580 PF00154 recA bacterial DNA recombination protein RG53_RS13585 PF02464 Competence-damaged protein RG53_RS13590 PF13406 Transglycosylase SLT domain RG53_RS13595 PF03608 PTS system enzyme II sorbitol-specific factor RG53_RS13600 PF03612 Sorbitol phosphotransferase enzyme II N-terminus RG53_RS13600 PF07663 Sorbitol phosphotransferase enzyme II C-terminus RG53_RS13605 PF03829 PTS system glucitol/sorbitol-specific IIA component RG53_RS13610 PF00106 short chain dehydrogenase RG53_RS13615 PF06923 Glucitol operon activator protein (GutM) RG53_RS13620 PF08220 DeoR-like helix-turn-helix domain RG53_RS13620 PF00455 DeoR C terminal sensor domain RG53_RS13625 PF01380 SIS domain RG53_RS13625 PF00571 CBS domain RG53_RS13630 PF01590 GAF domain RG53_RS13630 PF00158 Sigma-54 interaction domain RG53_RS13635 PF00301 Rubredoxin RG53_RS13635 PF00753 Metallo-beta-lactamase superfamily RG53_RS13635 PF00258 Flavodoxin RG53_RS13640 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG53_RS13640 PF18113 Rubredoxin binding C-terminal domain RG53_RS13645 PF00708 Acylphosphatase RG53_RS13645 PF07503 HypF finger RG53_RS13645 PF01300 Telomere recombination RG53_RS13645 PF17788 HypF Kae1-like domain RG53_RS13650 PF12800 4Fe-4S binding domain RG53_RS13650 PF13247 4Fe-4S dicluster domain RG53_RS13655 PF00356 Bacterial regulatory proteins, lacI family RG53_RS13660 PF00367 phosphotransferase system, EIIB RG53_RS13660 PF02378 Phosphotransferase system, EIIC RG53_RS13665 PF00232 Glycosyl hydrolase family 1 RG53_RS13670 PF01381 Helix-turn-helix RG53_RS13680 PF01750 Hydrogenase maturation protease RG53_RS13685 PF07450 Formate hydrogenlyase maturation protein HycH RG53_RS13690 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RG53_RS13695 PF12838 4Fe-4S dicluster domain RG53_RS13700 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit RG53_RS13700 PF00374 Nickel-dependent hydrogenase RG53_RS13700 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit RG53_RS13705 PF00146 NADH dehydrogenase RG53_RS13710 PF00361 Proton-conducting membrane transporter RG53_RS13715 PF13247 4Fe-4S dicluster domain RG53_RS13725 PF11046 Transcriptional repressor of hyc and hyp operons RG53_RS13730 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA RG53_RS13735 PF02492 CobW/HypB/UreG, nucleotide-binding domain RG53_RS13740 PF01455 HupF/HypC family RG53_RS13745 PF01924 Hydrogenase formation hypA family RG53_RS13750 PF02769 AIR synthase related protein, C-terminal domain RG53_RS13750 PF00586 AIR synthase related protein, N-terminal domain RG53_RS13755 PF01590 GAF domain RG53_RS13755 PF00158 Sigma-54 interaction domain RG53_RS13760 PF11756 Nitrous oxide-stimulated promoter RG53_RS13770 PF00488 MutS domain V RG53_RS13770 PF01624 MutS domain I RG53_RS13770 PF05188 MutS domain II RG53_RS13770 PF05192 MutS domain III RG53_RS13770 PF05190 MutS family domain IV RG53_RS13775 PF00149 Calcineurin-like phosphoesterase RG53_RS13780 PF00455 DeoR C terminal sensor domain RG53_RS13780 PF08220 DeoR-like helix-turn-helix domain RG53_RS13785 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RG53_RS13785 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RG53_RS13790 PF07005 Sugar-binding N-terminal domain RG53_RS13790 PF17042 Nucleotide-binding C-terminal domain RG53_RS13795 PF00596 Class II Aldolase and Adducin N-terminal domain RG53_RS13800 PF01261 Xylose isomerase-like TIM barrel RG53_RS13805 PF02447 GntP family permease RG53_RS13815 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase RG53_RS13820 PF02441 Flavoprotein RG53_RS13825 PF01047 MarR family RG53_RS13830 PF04545 Sigma-70, region 4 RG53_RS13830 PF04539 Sigma-70 region 3 RG53_RS13830 PF04542 Sigma-70 region 2 RG53_RS13830 PF00140 Sigma-70 factor, region 1.2 RG53_RS13835 PF01551 Peptidase family M23 RG53_RS13835 PF01476 LysM domain RG53_RS13845 PF01975 Survival protein SurE RG53_RS13850 PF01142 tRNA pseudouridine synthase D (TruD) RG53_RS13855 PF02542 YgbB family RG53_RS13860 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RG53_RS13865 PF04977 Septum formation initiator RG53_RS13870 PF12084 Protein of unknown function (DUF3561) RG53_RS13880 PF00009 Elongation factor Tu GTP binding domain RG53_RS13885 PF01507 Phosphoadenosine phosphosulfate reductase family RG53_RS13890 PF04389 Peptidase family M28 RG53_RS13895 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) RG53_RS13900 PF01867 CRISPR associated protein Cas1 RG53_RS13910 PF09704 CRISPR-associated protein (Cas_Cas5) RG53_RS13915 PF09344 CT1975-like protein RG53_RS13930 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) RG53_RS13935 PF00271 Helicase conserved C-terminal domain RG53_RS13935 PF18019 HD domain RG53_RS13935 PF00270 DEAD/DEAH box helicase RG53_RS13940 PF01848 Hok/gef family RG53_RS13945 PF01507 Phosphoadenosine phosphosulfate reductase family RG53_RS13950 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RG53_RS13950 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RG53_RS13955 PF00667 FAD binding domain RG53_RS13955 PF00258 Flavodoxin RG53_RS13955 PF00175 Oxidoreductase NAD-binding domain RG53_RS13960 PF01242 6-pyruvoyl tetrahydropterin synthase RG53_RS13965 PF01266 FAD dependent oxidoreductase RG53_RS13975 PF04309 Glycerol-3-phosphate responsive antiterminator RG53_RS13980 PF01012 Electron transfer flavoprotein domain RG53_RS13980 PF00766 Electron transfer flavoprotein FAD-binding domain RG53_RS13985 PF01012 Electron transfer flavoprotein domain RG53_RS13995 PF02913 FAD linked oxidases, C-terminal domain RG53_RS13995 PF01565 FAD binding domain RG53_RS14005 PF07690 Major Facilitator Superfamily RG53_RS14010 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RG53_RS14010 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RG53_RS14015 PF04055 Radical SAM superfamily RG53_RS14025 PF04536 TPM domain RG53_RS14030 PF00113 Enolase, C-terminal TIM barrel domain RG53_RS14030 PF03952 Enolase, N-terminal domain RG53_RS14035 PF06418 CTP synthase N-terminus RG53_RS14035 PF00117 Glutamine amidotransferase class-I RG53_RS14040 PF03819 MazG nucleotide pyrophosphohydrolase domain RG53_RS14045 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system RG53_RS14050 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin RG53_RS14055 PF02824 TGS domain RG53_RS14055 PF04607 Region found in RelA / SpoT proteins RG53_RS14055 PF13291 ACT domain RG53_RS14060 PF01938 TRAM domain RG53_RS14060 PF05958 tRNA (Uracil-5-)-methyltransferase RG53_RS14065 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) RG53_RS14065 PF00072 Response regulator receiver domain RG53_RS14065 PF01627 Hpt domain RG53_RS14065 PF00512 His Kinase A (phospho-acceptor) domain RG53_RS14065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG53_RS14065 PF00672 HAMP domain RG53_RS14070 PF13378 Enolase C-terminal domain-like RG53_RS14075 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RG53_RS14075 PF13378 Enolase C-terminal domain-like RG53_RS14080 PF07690 Major Facilitator Superfamily RG53_RS14085 PF00258 Flavodoxin RG53_RS14090 PF00849 RNA pseudouridylate synthase RG53_RS14095 PF04287 tRNA pseudouridine synthase C RG53_RS14105 PF07348 Syd protein (SUKH-2) RG53_RS14110 PF14489 QueF-like protein RG53_RS14110 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term RG53_RS14115 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases RG53_RS14115 PF03641 Possible lysine decarboxylase RG53_RS14115 PF11892 Domain of unknown function (DUF3412) RG53_RS14125 PF03315 Serine dehydratase beta chain RG53_RS14125 PF03313 Serine dehydratase alpha chain RG53_RS14130 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RG53_RS14130 PF01367 5'-3' exonuclease, C-terminal SAM fold RG53_RS14135 PF00465 Iron-containing alcohol dehydrogenase RG53_RS14140 PF00596 Class II Aldolase and Adducin N-terminal domain RG53_RS14145 PF07690 Major Facilitator Superfamily RG53_RS14150 PF07882 L-fucose isomerase, second N-terminal domain RG53_RS14150 PF07881 L-fucose isomerase, first N-terminal domain RG53_RS14150 PF02952 L-fucose isomerase, C-terminal domain RG53_RS14155 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RG53_RS14155 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RG53_RS14160 PF05025 RbsD / FucU transport protein family RG53_RS14165 PF00455 DeoR C terminal sensor domain RG53_RS14165 PF08220 DeoR-like helix-turn-helix domain RG53_RS14170 PF01728 FtsJ-like methyltransferase RG53_RS14170 PF18125 RlmM ferredoxin-like domain RG53_RS14175 PF04241 Protein of unknown function (DUF423) RG53_RS14180 PF03466 LysR substrate binding domain RG53_RS14180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG53_RS14185 PF06004 Bacterial protein of unknown function (DUF903) RG53_RS14190 PF00266 Aminotransferase class-V RG53_RS14195 PF02657 Fe-S metabolism associated domain RG53_RS14200 PF00899 ThiF family RG53_RS14205 PF06725 3D domain RG53_RS14205 PF03562 MltA specific insert domain RG53_RS14230 PF11741 AMIN domain RG53_RS14230 PF01520 N-acetylmuramoyl-L-alanine amidase RG53_RS14235 PF00583 Acetyltransferase (GNAT) family RG53_RS14235 PF00696 Amino acid kinase family RG53_RS14240 PF13538 UvrD-like helicase C-terminal domain RG53_RS14245 PF12705 PD-(D/E)XK nuclease superfamily RG53_RS14245 PF13361 UvrD-like helicase C-terminal domain RG53_RS14245 PF00580 UvrD/REP helicase N-terminal domain RG53_RS14250 PF00675 Insulinase (Peptidase family M16) RG53_RS14250 PF05193 Peptidase M16 inactive domain RG53_RS14250 PF16187 Middle or third domain of peptidase_M16 RG53_RS14255 PF17946 RecC C-terminal domain RG53_RS14260 PF12528 Type II secretion prepilin peptidase dependent protein C RG53_RS14260 PF07963 Prokaryotic N-terminal methylation motif RG53_RS14265 PF10713 Protein of unknown function (DUF2509) RG53_RS14270 PF07963 Prokaryotic N-terminal methylation motif RG53_RS14275 PF07963 Prokaryotic N-terminal methylation motif RG53_RS14280 PF00303 Thymidylate synthase RG53_RS14285 PF01790 Prolipoprotein diacylglyceryl transferase RG53_RS14290 PF00391 PEP-utilising enzyme, mobile domain RG53_RS14290 PF05524 PEP-utilising enzyme, N-terminal RG53_RS14290 PF01590 GAF domain RG53_RS14290 PF02896 PEP-utilising enzyme, TIM barrel domain RG53_RS14295 PF00293 NUDIX domain RG53_RS14310 PF02976 DNA mismatch repair enzyme MutH RG53_RS14315 PF03741 Integral membrane protein TerC family RG53_RS14320 PF06004 Bacterial protein of unknown function (DUF903) RG53_RS14325 PF00248 Aldo/keto reductase family RG53_RS14330 PF07690 Major Facilitator Superfamily RG53_RS14335 PF01553 Acyltransferase RG53_RS14335 PF00501 AMP-binding enzyme RG53_RS14345 PF00356 Bacterial regulatory proteins, lacI family RG53_RS14350 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RG53_RS14350 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RG53_RS14355 PF03466 LysR substrate binding domain RG53_RS14355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG53_RS14360 PF01177 Asp/Glu/Hydantoin racemase RG53_RS14365 PF00083 Sugar (and other) transporter RG53_RS14375 PF04962 KduI/IolB family RG53_RS14380 PF00108 Thiolase, N-terminal domain RG53_RS14380 PF02803 Thiolase, C-terminal domain RG53_RS14385 PF03222 Tryptophan/tyrosine permease family RG53_RS14390 PF00196 Bacterial regulatory proteins, luxR family RG53_RS14395 PF00486 Transcriptional regulatory protein, C terminal RG53_RS14420 PF07720 Tetratricopeptide repeat RG53_RS14425 PF00486 Transcriptional regulatory protein, C terminal RG53_RS14445 PF00196 Bacterial regulatory proteins, luxR family RG53_RS14445 PF00072 Response regulator receiver domain RG53_RS14450 PF00196 Bacterial regulatory proteins, luxR family RG53_RS14450 PF00072 Response regulator receiver domain RG53_RS14465 PF01514 Secretory protein of YscJ/FliF family RG53_RS14500 PF01312 FlhB HrpN YscU SpaS Family RG53_RS14510 PF01311 Bacterial export proteins, family 1 RG53_RS14515 PF01313 Bacterial export proteins, family 3 RG53_RS14520 PF00813 FliP family RG53_RS14525 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term RG53_RS14545 PF01551 Peptidase family M23 RG53_RS14545 PF01476 LysM domain RG53_RS14555 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RG53_RS14555 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RG53_RS14560 PF03450 CO dehydrogenase flavoprotein C-terminal domain RG53_RS14560 PF00941 FAD binding domain in molybdopterin dehydrogenase RG53_RS14565 PF00111 2Fe-2S iron-sulfur cluster binding domain RG53_RS14565 PF01799 [2Fe-2S] binding domain RG53_RS14570 PF00158 Sigma-54 interaction domain RG53_RS14570 PF13188 PAS domain RG53_RS14570 PF02954 Bacterial regulatory protein, Fis family RG53_RS14575 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RG53_RS14575 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RG53_RS14580 PF00291 Pyridoxal-phosphate dependent enzyme RG53_RS14585 PF01546 Peptidase family M20/M25/M40 RG53_RS14585 PF07687 Peptidase dimerisation domain RG53_RS14590 PF01979 Amidohydrolase family RG53_RS14595 PF00696 Amino acid kinase family RG53_RS14600 PF13478 XdhC Rossmann domain RG53_RS14600 PF02625 XdhC and CoxI family RG53_RS14610 PF12804 MobA-like NTP transferase domain RG53_RS14615 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RG53_RS14615 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG53_RS14620 PF01979 Amidohydrolase family RG53_RS14625 PF00941 FAD binding domain in molybdopterin dehydrogenase RG53_RS14630 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RG53_RS14630 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RG53_RS14630 PF01799 [2Fe-2S] binding domain RG53_RS14635 PF00860 Permease family RG53_RS14640 PF01979 Amidohydrolase family RG53_RS14645 PF00860 Permease family RG53_RS14650 PF13247 4Fe-4S dicluster domain RG53_RS14655 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RG53_RS14655 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG53_RS14655 PF13247 4Fe-4S dicluster domain RG53_RS14665 PF00860 Permease family RG53_RS14675 PF00293 NUDIX domain RG53_RS14680 PF01336 OB-fold nucleic acid binding domain RG53_RS14680 PF00152 tRNA synthetases class II (D, K and N) RG53_RS14690 PF02272 DHHA1 domain RG53_RS14690 PF01368 DHH family RG53_RS14690 PF17768 RecJ OB domain RG53_RS14695 PF13098 Thioredoxin-like domain RG53_RS14695 PF10411 Disulfide bond isomerase protein N-terminus RG53_RS14700 PF00589 Phage integrase family RG53_RS14700 PF02899 Phage integrase, N-terminal SAM-like domain RG53_RS14705 PF00258 Flavodoxin RG53_RS14710 PF07254 Membrane-bound toxin component of toxin-antitoxin system RG53_RS14715 PF03937 Flavinator of succinate dehydrogenase RG53_RS14720 PF01571 Aminomethyltransferase folate-binding domain RG53_RS14725 PF03006 Haemolysin-III related RG53_RS14730 PF04266 ASCH domain RG53_RS14735 PF00232 Glycosyl hydrolase family 1 RG53_RS14745 PF02347 Glycine cleavage system P-protein RG53_RS14750 PF01597 Glycine cleavage H-protein RG53_RS14755 PF08669 Glycine cleavage T-protein C-terminal barrel domain RG53_RS14755 PF01571 Aminomethyltransferase folate-binding domain RG53_RS14760 PF01494 FAD binding domain RG53_RS14765 PF01494 FAD binding domain RG53_RS14770 PF00557 Metallopeptidase family M24 RG53_RS14770 PF05195 Aminopeptidase P, N-terminal domain RG53_RS14775 PF03695 Uncharacterised protein family (UPF0149) RG53_RS14785 PF05164 Cell division protein ZapA RG53_RS14795 PF01812 5-formyltetrahydrofolate cyclo-ligase family RG53_RS14815 PF01842 ACT domain RG53_RS14815 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RG53_RS14815 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RG53_RS14820 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) RG53_RS14825 PF03466 LysR substrate binding domain RG53_RS14830 PF03466 LysR substrate binding domain RG53_RS14830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG53_RS14840 PF01642 Methylmalonyl-CoA mutase RG53_RS14840 PF02310 B12 binding domain RG53_RS14850 PF00378 Enoyl-CoA hydratase/isomerase RG53_RS14855 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain RG53_RS14855 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain RG53_RS14860 PF03466 LysR substrate binding domain RG53_RS14860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG53_RS14865 PF04402 Protein of unknown function (DUF541) RG53_RS14870 PF01810 LysE type translocator RG53_RS14875 PF05552 Conserved TM helix RG53_RS14875 PF00924 Mechanosensitive ion channel RG53_RS14890 PF01116 Fructose-bisphosphate aldolase class-II RG53_RS14895 PF00162 Phosphoglycerate kinase RG53_RS14900 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RG53_RS14900 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RG53_RS14925 PF00005 ABC transporter RG53_RS14930 PF00005 ABC transporter RG53_RS14940 PF05068 Mannitol repressor RG53_RS14945 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded RG53_RS14950 PF08240 Alcohol dehydrogenase GroES-like domain RG53_RS14950 PF00107 Zinc-binding dehydrogenase RG53_RS14955 PF02378 Phosphotransferase system, EIIC RG53_RS14955 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RG53_RS14960 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RG53_RS14965 PF02780 Transketolase, C-terminal domain RG53_RS14965 PF00456 Transketolase, thiamine diphosphate binding domain RG53_RS14965 PF02779 Transketolase, pyrimidine binding domain RG53_RS14970 PF01435 Peptidase family M48 RG53_RS14975 PF00491 Arginase family RG53_RS14980 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RG53_RS14980 PF17944 Arginine decarboxylase C-terminal helical extension RG53_RS14980 PF17810 Arginine decarboxylase helical bundle domain RG53_RS14985 PF11036 Virulence promoting factor RG53_RS14990 PF17430 Uncharacterized YqgC-like RG53_RS15000 PF02772 S-adenosylmethionine synthetase, central domain RG53_RS15000 PF02773 S-adenosylmethionine synthetase, C-terminal domain RG53_RS15000 PF00438 S-adenosylmethionine synthetase, N-terminal domain RG53_RS15010 PF00083 Sugar (and other) transporter RG53_RS15015 PF10263 SprT-like family RG53_RS15015 PF17283 SprT-like zinc ribbon domain RG53_RS15020 PF04231 Endonuclease I RG53_RS15025 PF04452 RNA methyltransferase RG53_RS15030 PF02951 Prokaryotic glutathione synthetase, N-terminal domain RG53_RS15030 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain RG53_RS15035 PF02622 Uncharacterized ACR, COG1678 RG53_RS15040 PF03652 Holliday junction resolvase RG53_RS15050 PF00437 Type II/IV secretion system protein RG53_RS15055 PF01168 Alanine racemase, N-terminal domain RG53_RS15060 PF02325 YGGT family RG53_RS15065 PF02594 Uncharacterised ACR, YggU family COG1872 RG53_RS15070 PF01725 Ham1 family RG53_RS15075 PF06969 HemN C-terminal domain RG53_RS15075 PF04055 Radical SAM superfamily RG53_RS15080 PF06717 Protein of unknown function (DUF1202) RG53_RS15085 PF00710 Asparaginase, N-terminal RG53_RS15085 PF17763 Glutaminase/Asparaginase C-terminal domain RG53_RS15090 PF11101 Protein of unknown function (DUF2884) RG53_RS15095 PF04320 Protein with unknown function (DUF469) RG53_RS15100 PF02390 Putative methyltransferase RG53_RS15110 PF10576 Iron-sulfur binding domain of endonuclease III RG53_RS15110 PF14815 NUDIX domain RG53_RS15110 PF00633 Helix-hairpin-helix motif RG53_RS15110 PF00730 HhH-GPD superfamily base excision DNA repair protein RG53_RS15115 PF04362 Bacterial Fe(2+) trafficking RG53_RS15120 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain RG53_RS15120 PF01464 Transglycosylase SLT domain RG53_RS15125 PF03825 Nucleoside H+ symporter RG53_RS15130 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain RG53_RS15130 PF01276 Orn/Lys/Arg decarboxylase, major domain RG53_RS15130 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain RG53_RS15140 PF04474 Protein of unknown function (DUF554) RG53_RS15150 PF04612 Type II secretion system (T2SS), protein M RG53_RS15155 PF12693 GspL periplasmic domain RG53_RS15160 PF03934 Type II secretion system (T2SS), protein K RG53_RS15165 PF11612 Type II secretion system (T2SS), protein J RG53_RS15165 PF07963 Prokaryotic N-terminal methylation motif RG53_RS15170 PF02501 Type II secretion system (T2SS), protein I RG53_RS15170 PF07963 Prokaryotic N-terminal methylation motif RG53_RS15175 PF12019 Type II transport protein GspH RG53_RS15180 PF08334 Type II secretion system (T2SS), protein G RG53_RS15180 PF07963 Prokaryotic N-terminal methylation motif RG53_RS15185 PF00482 Type II secretion system (T2SS), protein F RG53_RS15190 PF00437 Type II/IV secretion system protein RG53_RS15195 PF00263 Bacterial type II and III secretion system protein RG53_RS15195 PF03958 Bacterial type II/III secretion system short domain RG53_RS15200 PF11356 Type II secretion system protein C RG53_RS15205 PF16549 Type II secretion system (T2SS) pilotin, S protein RG53_RS15210 PF01478 Type IV leader peptidase family RG53_RS15210 PF06750 Bacterial Peptidase A24 N-terminal domain RG53_RS15215 PF13402 Peptidase M60, enhancin and enhancin-like RG53_RS15215 PF17291 N-terminal domain of M60-like peptidases RG53_RS15215 PF13322 Domain of unknown function (DUF4092) RG53_RS15230 PF02652 L-lactate permease RG53_RS15235 PF01274 Malate synthase RG53_RS15240 PF03928 Haem-degrading RG53_RS15245 PF13183 4Fe-4S dicluster domain RG53_RS15245 PF02754 Cysteine-rich domain RG53_RS15250 PF01565 FAD binding domain RG53_RS15255 PF01565 FAD binding domain RG53_RS15255 PF02913 FAD linked oxidases, C-terminal domain RG53_RS15260 PF07729 FCD domain RG53_RS15260 PF00392 Bacterial regulatory proteins, gntR family RG53_RS15275 PF14535 AMP-binding enzyme C-terminal domain RG53_RS15275 PF00501 AMP-binding enzyme RG53_RS15285 PF00550 Phosphopantetheine attachment site RG53_RS15290 PF00155 Aminotransferase class I and II RG53_RS15300 PF03739 Lipopolysaccharide export system permease LptF/LptG RG53_RS15305 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) RG53_RS15315 PF01943 Polysaccharide biosynthesis protein RG53_RS15335 PF01384 Phosphate transporter family RG53_RS15340 PF05257 CHAP domain RG53_RS15340 PF03738 Glutathionylspermidine synthase preATP-grasp RG53_RS15345 PF02798 Glutathione S-transferase, N-terminal domain RG53_RS15355 PF02371 Transposase IS116/IS110/IS902 family RG53_RS15355 PF01548 Transposase RG53_RS15360 PF01455 HupF/HypC family RG53_RS15365 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA RG53_RS15370 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE RG53_RS15375 PF01750 Hydrogenase maturation protease RG53_RS15380 PF00374 Nickel-dependent hydrogenase RG53_RS15385 PF03916 Polysulphide reductase, NrfD RG53_RS15390 PF13247 4Fe-4S dicluster domain RG53_RS15395 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RG53_RS15395 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal RG53_RS15405 PF11115 Protein of unknown function (DUF2623) RG53_RS15410 PF01738 Dienelactone hydrolase family RG53_RS15415 PF00248 Aldo/keto reductase family RG53_RS15420 PF03350 Uncharacterized protein family, UPF0114 RG53_RS15435 PF02472 Biopolymer transport protein ExbD/TolR RG53_RS15440 PF01618 MotA/TolQ/ExbB proton channel family RG53_RS15450 PF01053 Cys/Met metabolism PLP-dependent enzyme RG53_RS15455 PF09335 SNARE associated Golgi protein RG53_RS15460 PF06719 AraC-type transcriptional regulator N-terminus RG53_RS15460 PF12833 Helix-turn-helix domain RG53_RS15470 PF00465 Iron-containing alcohol dehydrogenase RG53_RS15475 PF00248 Aldo/keto reductase family RG53_RS15480 PF12883 Protein of unknown function (DUF3828) RG53_RS15485 PF04728 Lipoprotein leucine-zipper RG53_RS15490 PF11842 Domain of unknown function (DUF3362) RG53_RS15490 PF04055 Radical SAM superfamily RG53_RS15490 PF08497 Radical SAM N-terminal RG53_RS15495 PF00394 Multicopper oxidase RG53_RS15495 PF07732 Multicopper oxidase RG53_RS15495 PF07731 Multicopper oxidase RG53_RS15500 PF01553 Acyltransferase RG53_RS15510 PF03989 DNA gyrase C-terminal domain, beta-propeller RG53_RS15510 PF00521 DNA gyrase/topoisomerase IV, subunit A RG53_RS15520 PF06445 GyrI-like small molecule binding domain RG53_RS15525 PF04076 Bacterial OB fold (BOF) protein RG53_RS15530 PF00486 Transcriptional regulatory protein, C terminal RG53_RS15530 PF00072 Response regulator receiver domain RG53_RS15535 PF00512 His Kinase A (phospho-acceptor) domain RG53_RS15535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG53_RS15535 PF08521 Two-component sensor kinase N-terminal RG53_RS15540 PF10840 Protein of unknown function (DUF2645) RG53_RS15545 PF02525 Flavodoxin-like fold RG53_RS15550 PF03992 Antibiotic biosynthesis monooxygenase RG53_RS15580 PF00294 pfkB family carbohydrate kinase RG53_RS15600 PF00986 DNA gyrase B subunit, carboxyl terminus RG53_RS15600 PF01751 Toprim domain RG53_RS15600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG53_RS15600 PF00204 DNA gyrase B RG53_RS15605 PF05728 Uncharacterised protein family (UPF0227) RG53_RS15610 PF00149 Calcineurin-like phosphoesterase RG53_RS15615 PF06853 Protein of unknown function (DUF1249) RG53_RS15620 PF00293 NUDIX domain RG53_RS15625 PF02321 Outer membrane efflux protein RG53_RS15635 PF06693 Protein of unknown function (DUF1190) RG53_RS15640 PF03738 Glutathionylspermidine synthase preATP-grasp RG53_RS15645 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase RG53_RS15650 PF02535 ZIP Zinc transporter RG53_RS15660 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase RG53_RS15665 PF04380 Membrane fusogenic activity RG53_RS15670 PF00419 Fimbrial protein RG53_RS15675 PF00577 Outer membrane usher protein RG53_RS15675 PF13954 PapC N-terminal domain RG53_RS15675 PF13953 PapC C-terminal domain RG53_RS15680 PF02753 Pili assembly chaperone PapD, C-terminal domain RG53_RS15680 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RG53_RS15690 PF08971 Glycogen synthesis protein RG53_RS15695 PF07290 Protein of unknown function (DUF1449) RG53_RS15700 PF01145 SPFH domain / Band 7 family RG53_RS15700 PF15975 Flotillin RG53_RS15715 PF01467 Cytidylyltransferase-like RG53_RS15715 PF00294 pfkB family carbohydrate kinase RG53_RS15720 PF08335 GlnD PII-uridylyltransferase RG53_RS15720 PF03710 Glutamate-ammonia ligase adenylyltransferase RG53_RS15725 PF01928 CYTH domain RG53_RS15735 PF08239 Bacterial SH3 domain RG53_RS15740 PF12627 Probable RNA and SrmB- binding site of polymerase A RG53_RS15740 PF01743 Poly A polymerase head domain RG53_RS15740 PF01966 HD domain RG53_RS15745 PF02673 Bacitracin resistance protein BacA RG53_RS15750 PF02152 Dihydroneopterin aldolase RG53_RS15755 PF02660 Glycerol-3-phosphate acyltransferase RG53_RS15760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG53_RS15760 PF03466 LysR substrate binding domain RG53_RS15770 PF05681 Fumarate hydratase (Fumerase) RG53_RS15775 PF05683 Fumarase C-terminus RG53_RS15780 PF00939 Sodium:sulfate symporter transmembrane region RG53_RS15785 PF00814 Glycoprotease family RG53_RS15790 PF01165 Ribosomal protein S21 RG53_RS15795 PF08275 DNA primase catalytic core, N-terminal domain RG53_RS15795 PF01807 CHC2 zinc finger RG53_RS15795 PF10410 DnaB-helicase binding domain of primase RG53_RS15795 PF08278 DNA primase DnaG DnaB-binding RG53_RS15805 PF04546 Sigma-70, non-essential region RG53_RS15805 PF03979 Sigma-70 factor, region 1.1 RG53_RS15805 PF00140 Sigma-70 factor, region 1.2 RG53_RS15805 PF04542 Sigma-70 region 2 RG53_RS15805 PF04539 Sigma-70 region 3 RG53_RS15805 PF04545 Sigma-70, region 4 RG53_RS15810 PF03167 Uracil DNA glycosylase superfamily RG53_RS15820 PF04954 Siderophore-interacting protein RG53_RS15820 PF08021 Siderophore-interacting FAD-binding domain RG53_RS15825 PF03551 Transcriptional regulator PadR-like family RG53_RS15830 PF08447 PAS fold RG53_RS15830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RG53_RS15840 PF00202 Aminotransferase class-III RG53_RS15845 PF01588 Putative tRNA binding domain RG53_RS15855 PF00356 Bacterial regulatory proteins, lacI family RG53_RS15860 PF02929 Beta galactosidase small chain RG53_RS15860 PF16353 Domain of unknown function(DUF4981) RG53_RS15860 PF00703 Glycosyl hydrolases family 2 RG53_RS15860 PF02836 Glycosyl hydrolases family 2, TIM barrel domain RG53_RS15860 PF02837 Glycosyl hydrolases family 2, sugar binding domain RG53_RS15865 PF04074 YhcH/YjgK/YiaL RG53_RS15870 PF13520 Amino acid permease RG53_RS15880 PF01204 Trehalase RG53_RS15885 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RG53_RS15885 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG53_RS15890 PF01381 Helix-turn-helix RG53_RS15895 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system RG53_RS15900 PF05175 Methyltransferase small domain RG53_RS15905 PF01863 Protein of unknown function DUF45 RG53_RS15910 PF02698 DUF218 domain RG53_RS15915 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RG53_RS15920 PF03741 Integral membrane protein TerC family RG53_RS15925 PF00375 Sodium:dicarboxylate symporter family RG53_RS15930 PF10688 Bacterial inner membrane protein RG53_RS15935 PF08666 SAF domain RG53_RS15935 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus RG53_RS15940 PF02614 Glucuronate isomerase RG53_RS15945 PF07690 Major Facilitator Superfamily RG53_RS15955 PF15976 CS1-pili formation C-terminal RG53_RS15955 PF16967 E-set like domain RG53_RS15955 PF17271 TcfC Usher-like barrel domain RG53_RS15960 PF04449 CS1 type fimbrial major subunit RG53_RS15970 PF00392 Bacterial regulatory proteins, gntR family RG53_RS15970 PF07729 FCD domain RG53_RS15975 PF09335 SNARE associated Golgi protein RG53_RS15980 PF13721 SecD export protein N-terminal TM region RG53_RS15985 PF06476 Protein of unknown function (DUF1090) RG53_RS15990 PF05957 Bacterial protein of unknown function (DUF883) RG53_RS15995 PF07332 Putative Actinobacterial Holin-X, holin superfamily III RG53_RS16000 PF13997 YqjK-like protein RG53_RS16005 PF07681 DoxX RG53_RS16010 PF13409 Glutathione S-transferase, N-terminal domain RG53_RS16015 PF05656 Protein of unknown function (DUF805) RG53_RS16020 PF05656 Protein of unknown function (DUF805) RG53_RS16030 PF03466 LysR substrate binding domain RG53_RS16030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG53_RS16035 PF02678 Pirin RG53_RS16035 PF17954 Quercetinase C-terminal cupin domain RG53_RS16045 PF03313 Serine dehydratase alpha chain RG53_RS16055 PF03313 Serine dehydratase alpha chain RG53_RS16055 PF03315 Serine dehydratase beta chain RG53_RS16060 PF01042 Endoribonuclease L-PSP RG53_RS16065 PF01228 Glycine radical RG53_RS16065 PF02901 Pyruvate formate lyase-like RG53_RS16070 PF00871 Acetokinase family RG53_RS16075 PF03222 Tryptophan/tyrosine permease family RG53_RS16080 PF00291 Pyridoxal-phosphate dependent enzyme RG53_RS16085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG53_RS16085 PF03466 LysR substrate binding domain RG53_RS16105 PF02371 Transposase IS116/IS110/IS902 family RG53_RS16105 PF01548 Transposase RG53_RS16120 PF02595 Glycerate kinase family RG53_RS16125 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RG53_RS16125 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RG53_RS16130 PF03328 HpcH/HpaI aldolase/citrate lyase family RG53_RS16135 PF07690 Major Facilitator Superfamily RG53_RS16140 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus RG53_RS16140 PF08666 SAF domain RG53_RS16145 PF15937 prlF antitoxin for toxin YhaV_toxin RG53_RS16150 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system RG53_RS16155 PF00455 DeoR C terminal sensor domain RG53_RS16155 PF08220 DeoR-like helix-turn-helix domain RG53_RS16165 PF08013 Tagatose 6 phosphate kinase RG53_RS16170 PF03830 PTS system sorbose subfamily IIB component RG53_RS16175 PF03609 PTS system sorbose-specific iic component RG53_RS16180 PF03613 PTS system mannose/fructose/sorbose family IID component RG53_RS16185 PF03610 PTS system fructose IIA component RG53_RS16190 PF01979 Amidohydrolase family RG53_RS16195 PF01380 SIS domain RG53_RS16200 PF01116 Fructose-bisphosphate aldolase class-II RG53_RS16205 PF03830 PTS system sorbose subfamily IIB component RG53_RS16210 PF03609 PTS system sorbose-specific iic component RG53_RS16215 PF03613 PTS system mannose/fructose/sorbose family IID component RG53_RS16220 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase RG53_RS16225 PF00419 Fimbrial protein RG53_RS16230 PF02753 Pili assembly chaperone PapD, C-terminal domain RG53_RS16230 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RG53_RS16235 PF13954 PapC N-terminal domain RG53_RS16235 PF13953 PapC C-terminal domain RG53_RS16235 PF00577 Outer membrane usher protein RG53_RS16240 PF00419 Fimbrial protein RG53_RS16245 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RG53_RS16250 PF04348 LppC putative lipoprotein RG53_RS16255 PF02021 Uncharacterised protein family UPF0102 RG53_RS16260 PF13580 SIS domain RG53_RS16265 PF04972 BON domain RG53_RS16270 PF03773 Predicted permease RG53_RS16275 PF13460 NAD(P)H-binding RG53_RS16280 PF01965 DJ-1/PfpI family RG53_RS16290 PF01541 GIY-YIG catalytic domain RG53_RS16295 PF13508 Acetyltransferase (GNAT) domain RG53_RS16300 PF02036 SCP-2 sterol transfer family RG53_RS16305 PF01136 Peptidase family U32 RG53_RS16310 PF01136 Peptidase family U32 RG53_RS16315 PF00296 Luciferase-like monooxygenase RG53_RS16320 PF03222 Tryptophan/tyrosine permease family RG53_RS16330 PF00270 DEAD/DEAH box helicase RG53_RS16330 PF12343 Cold shock protein DEAD box A RG53_RS16330 PF00271 Helicase conserved C-terminal domain RG53_RS16330 PF03880 DbpA RNA binding domain RG53_RS16340 PF13181 Tetratricopeptide repeat RG53_RS16340 PF07719 Tetratricopeptide repeat RG53_RS16345 PF01138 3' exoribonuclease family, domain 1 RG53_RS16345 PF00013 KH domain RG53_RS16345 PF03725 3' exoribonuclease family, domain 2 RG53_RS16345 PF00575 S1 RNA binding domain RG53_RS16345 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain RG53_RS16350 PF00312 Ribosomal protein S15 RG53_RS16355 PF01509 TruB family pseudouridylate synthase (N terminal domain) RG53_RS16355 PF09157 Pseudouridine synthase II TruB, C-terminal RG53_RS16355 PF16198 tRNA pseudouridylate synthase B C-terminal domain RG53_RS16360 PF02033 Ribosome-binding factor A RG53_RS16365 PF11987 Translation-initiation factor 2 RG53_RS16365 PF00009 Elongation factor Tu GTP binding domain RG53_RS16365 PF04760 Translation initiation factor IF-2, N-terminal region RG53_RS16365 PF08364 Bacterial translation initiation factor IF-2 associated region RG53_RS16370 PF13184 NusA-like KH domain RG53_RS16370 PF08529 NusA N-terminal domain RG53_RS16370 PF00575 S1 RNA binding domain RG53_RS16375 PF02576 RimP N-terminal domain RG53_RS16375 PF17384 RimP C-terminal SH3 domain RG53_RS16385 PF00764 Arginosuccinate synthase RG53_RS16390 PF00884 Sulfatase RG53_RS16400 PF03840 Preprotein translocase SecG subunit RG53_RS16405 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RG53_RS16405 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RG53_RS16405 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RG53_RS16405 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RG53_RS16410 PF00809 Pterin binding enzyme RG53_RS16415 PF06480 FtsH Extracellular RG53_RS16415 PF00004 ATPase family associated with various cellular activities (AAA) RG53_RS16415 PF01434 Peptidase family M41 RG53_RS16415 PF17862 AAA+ lid domain RG53_RS16420 PF01728 FtsJ-like methyltransferase RG53_RS16425 PF01985 CRS1 / YhbY (CRM) domain RG53_RS16430 PF03449 Transcription elongation factor, N-terminal RG53_RS16430 PF01272 Transcription elongation factor, GreA/GreB, C-term RG53_RS16435 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family RG53_RS16440 PF01926 50S ribosome-binding GTPase RG53_RS16440 PF01018 GTP1/OBG RG53_RS16445 PF00892 EamA-like transporter family RG53_RS16450 PF01016 Ribosomal L27 protein RG53_RS16455 PF00829 Ribosomal prokaryotic L21 protein RG53_RS16460 PF00348 Polyprenyl synthetase RG53_RS16465 PF13693 Winged helix-turn-helix DNA-binding RG53_RS16470 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RG53_RS16475 PF01722 BolA-like protein RG53_RS16480 PF13466 STAS domain RG53_RS16485 PF05494 MlaC protein RG53_RS16490 PF02470 MlaD protein RG53_RS16495 PF02405 Permease MlaE RG53_RS16500 PF00005 ABC transporter RG53_RS16505 PF01699 Sodium/calcium exchanger protein RG53_RS16510 PF00571 CBS domain RG53_RS16510 PF01380 SIS domain RG53_RS16520 PF06835 Lipopolysaccharide-assembly, LptC-related RG53_RS16525 PF03968 OstA-like protein RG53_RS16530 PF00005 ABC transporter RG53_RS16530 PF12399 Branched-chain amino acid ATP-binding cassette transporter RG53_RS16535 PF04552 Sigma-54, DNA binding domain RG53_RS16535 PF04963 Sigma-54 factor, core binding domain RG53_RS16535 PF00309 Sigma-54 factor, Activator interacting domain (AID) RG53_RS16540 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein RG53_RS16545 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RG53_RS16550 PF03668 P-loop ATPase protein family RG53_RS16555 PF00381 PTS HPr component phosphorylation site RG53_RS16560 PF10707 PhoP regulatory network protein YrbL RG53_RS16565 PF00912 Transglycosylase RG53_RS16575 PF00072 Response regulator receiver domain RG53_RS16575 PF00989 PAS fold RG53_RS16575 PF01627 Hpt domain RG53_RS16575 PF18415 Histidine kinase receptor ArcB trans-membrane domain RG53_RS16575 PF00512 His Kinase A (phospho-acceptor) domain RG53_RS16575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG53_RS16580 PF16199 Radical_SAM C-terminal domain RG53_RS16580 PF04055 Radical SAM superfamily RG53_RS16590 PF01493 GXGXG motif RG53_RS16590 PF00310 Glutamine amidotransferases class-II RG53_RS16590 PF01645 Conserved region in glutamate synthase RG53_RS16590 PF04898 Glutamate synthase central domain RG53_RS16595 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RG53_RS16595 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG53_RS16600 PF06250 YhcG PDDEXK nuclease domain RG53_RS16600 PF17761 DUF1016 N-terminal domain RG53_RS16610 PF04074 YhcH/YjgK/YiaL RG53_RS16615 PF00480 ROK family RG53_RS16620 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase RG53_RS16625 PF07690 Major Facilitator Superfamily RG53_RS16630 PF00701 Dihydrodipicolinate synthetase family RG53_RS16635 PF07729 FCD domain RG53_RS16635 PF00392 Bacterial regulatory proteins, gntR family RG53_RS16645 PF03606 C4-dicarboxylate anaerobic carrier RG53_RS16650 PF04386 Stringent starvation protein B RG53_RS16655 PF00043 Glutathione S-transferase, C-terminal domain RG53_RS16655 PF02798 Glutathione S-transferase, N-terminal domain RG53_RS16660 PF00380 Ribosomal protein S9/S16 RG53_RS16665 PF00572 Ribosomal protein L13 RG53_RS16670 PF03969 AFG1-like ATPase RG53_RS16675 PF06295 Protein of unknown function (DUF1043) RG53_RS16680 PF13180 PDZ domain RG53_RS16680 PF00595 PDZ domain RG53_RS16685 PF13180 PDZ domain RG53_RS16690 PF00056 lactate/malate dehydrogenase, NAD binding domain RG53_RS16690 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain RG53_RS16695 PF01316 Arginine repressor, DNA binding domain RG53_RS16695 PF02863 Arginine repressor, C-terminal domain RG53_RS16700 PF07338 Protein of unknown function (DUF1471) RG53_RS16705 PF01337 Barstar (barnase inhibitor) RG53_RS16710 PF04632 Fusaric acid resistance protein family RG53_RS16715 PF13533 Biotin-lipoyl like RG53_RS16720 PF07869 Protein of unknown function (DUF1656) RG53_RS16725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG53_RS16725 PF03466 LysR substrate binding domain RG53_RS16730 PF01523 Putative modulator of DNA gyrase RG53_RS16735 PF13116 Protein of unknown function RG53_RS16735 PF13502 AsmA-like C-terminal region RG53_RS16740 PF00575 S1 RNA binding domain RG53_RS16740 PF10150 Ribonuclease E/G family RG53_RS16745 PF02545 Maf-like protein RG53_RS16750 PF04093 rod shape-determining protein MreD RG53_RS16755 PF04085 rod shape-determining protein MreC RG53_RS16775 PF00990 Diguanylate cyclase, GGDEF domain RG53_RS16775 PF00563 EAL domain RG53_RS16775 PF17157 Gammaproteobacterial periplasmic sensor domain RG53_RS16780 PF00107 Zinc-binding dehydrogenase RG53_RS16780 PF08240 Alcohol dehydrogenase GroES-like domain RG53_RS16785 PF01794 Ferric reductase like transmembrane component RG53_RS16795 PF00364 Biotin-requiring enzyme RG53_RS16800 PF00289 Biotin carboxylase, N-terminal domain RG53_RS16800 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RG53_RS16800 PF02785 Biotin carboxylase C-terminal domain RG53_RS16805 PF06196 Protein of unknown function (DUF997) RG53_RS16810 PF00474 Sodium:solute symporter family RG53_RS16820 PF01207 Dihydrouridine synthase (Dus) RG53_RS16825 PF02954 Bacterial regulatory protein, Fis family RG53_RS16830 PF01555 DNA methylase RG53_RS16835 PF10831 Protein of unknown function (DUF2556) RG53_RS16840 PF08361 MAATS-type transcriptional repressor, C-terminal region RG53_RS16840 PF00440 Bacterial regulatory proteins, tetR family RG53_RS16850 PF00529 HlyD membrane-fusion protein of T1SS RG53_RS16850 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RG53_RS16855 PF00873 AcrB/AcrD/AcrF family RG53_RS16865 PF00497 Bacterial extracellular solute-binding proteins, family 3 RG53_RS16870 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS16875 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS16880 PF00005 ABC transporter RG53_RS16915 PF00132 Bacterial transferase hexapeptide (six repeats) RG53_RS16920 PF07369 Protein of unknown function (DUF1488) RG53_RS16925 PF01488 Shikimate / quinate 5-dehydrogenase RG53_RS16925 PF18317 Shikimate 5'-dehydrogenase C-terminal domain RG53_RS16925 PF08501 Shikimate dehydrogenase substrate binding domain RG53_RS16930 PF01300 Telomere recombination RG53_RS16935 PF01396 Topoisomerase DNA binding C4 zinc finger RG53_RS16940 PF04361 Protein of unknown function (DUF494) RG53_RS16950 PF01327 Polypeptide deformylase RG53_RS16955 PF02911 Formyl transferase, C-terminal domain RG53_RS16955 PF00551 Formyl transferase RG53_RS16960 PF01189 16S rRNA methyltransferase RsmB/F RG53_RS16960 PF01029 NusB family RG53_RS16965 PF02080 TrkA-C domain RG53_RS16965 PF02254 TrkA-N domain RG53_RS16970 PF01741 Large-conductance mechanosensitive channel, MscL RG53_RS16975 PF03889 Alternative ribosome-rescue factor A RG53_RS16980 PF13411 MerR HTH family regulatory protein RG53_RS16985 PF09350 Domain of unknown function (DUF1992) RG53_RS16990 PF01196 Ribosomal protein L17 RG53_RS16995 PF01000 RNA polymerase Rpb3/RpoA insert domain RG53_RS16995 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain RG53_RS16995 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain RG53_RS17000 PF01479 S4 domain RG53_RS17000 PF00163 Ribosomal protein S4/S9 N-terminal domain RG53_RS17005 PF00411 Ribosomal protein S11 RG53_RS17010 PF00416 Ribosomal protein S13/S18 RG53_RS17015 PF00444 Ribosomal protein L36 RG53_RS17020 PF00344 SecY translocase RG53_RS17025 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A RG53_RS17030 PF00327 Ribosomal protein L30p/L7e RG53_RS17035 PF03719 Ribosomal protein S5, C-terminal domain RG53_RS17035 PF00333 Ribosomal protein S5, N-terminal domain RG53_RS17040 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast RG53_RS17045 PF00347 Ribosomal protein L6 RG53_RS17050 PF00410 Ribosomal protein S8 RG53_RS17055 PF00253 Ribosomal protein S14p/S29e RG53_RS17060 PF00673 ribosomal L5P family C-terminus RG53_RS17060 PF00281 Ribosomal protein L5 RG53_RS17065 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 RG53_RS17065 PF00467 KOW motif RG53_RS17070 PF00238 Ribosomal protein L14p/L23e RG53_RS17075 PF00366 Ribosomal protein S17 RG53_RS17080 PF00831 Ribosomal L29 protein RG53_RS17085 PF00252 Ribosomal protein L16p/L10e RG53_RS17090 PF00189 Ribosomal protein S3, C-terminal domain RG53_RS17090 PF07650 KH domain RG53_RS17095 PF00237 Ribosomal protein L22p/L17e RG53_RS17100 PF00203 Ribosomal protein S19 RG53_RS17105 PF03947 Ribosomal Proteins L2, C-terminal domain RG53_RS17105 PF00181 Ribosomal Proteins L2, RNA binding domain RG53_RS17110 PF00276 Ribosomal protein L23 RG53_RS17115 PF00573 Ribosomal protein L4/L1 family RG53_RS17120 PF00297 Ribosomal protein L3 RG53_RS17125 PF00338 Ribosomal protein S10p/S20e RG53_RS17135 PF01478 Type IV leader peptidase family RG53_RS17140 PF00210 Ferritin-like domain RG53_RS17145 PF04324 BFD-like [2Fe-2S] binding domain RG53_RS17155 PF03144 Elongation factor Tu domain 2 RG53_RS17155 PF00009 Elongation factor Tu GTP binding domain RG53_RS17155 PF03143 Elongation factor Tu C-terminal domain RG53_RS17160 PF14492 Elongation Factor G, domain II RG53_RS17160 PF03764 Elongation factor G, domain IV RG53_RS17160 PF00009 Elongation factor Tu GTP binding domain RG53_RS17160 PF03144 Elongation factor Tu domain 2 RG53_RS17160 PF00679 Elongation factor G C-terminus RG53_RS17165 PF00177 Ribosomal protein S7p/S5e RG53_RS17170 PF00164 Ribosomal protein S12/S23 RG53_RS17175 PF04077 DsrH like protein RG53_RS17180 PF02635 DsrE/DsrF-like family RG53_RS17185 PF02635 DsrE/DsrF-like family RG53_RS17190 PF08348 YheO-like PAS domain RG53_RS17190 PF13309 HTH domain RG53_RS17195 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase RG53_RS17195 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RG53_RS17200 PF04102 SlyX RG53_RS17205 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RG53_RS17210 PF09526 Probable metal-binding protein (DUF2387) RG53_RS17215 PF00999 Sodium/hydrogen exchanger family RG53_RS17215 PF02254 TrkA-N domain RG53_RS17220 PF02525 Flavodoxin-like fold RG53_RS17230 PF00005 ABC transporter RG53_RS17230 PF12848 ABC transporter RG53_RS17235 PF00561 alpha/beta hydrolase fold RG53_RS17240 PF06794 Uncharacterised protein family (UPF0270) RG53_RS17245 PF00485 Phosphoribulokinase / Uridine kinase family RG53_RS17250 PF02566 OsmC-like protein RG53_RS17260 PF00027 Cyclic nucleotide-binding domain RG53_RS17260 PF13545 Crp-like helix-turn-helix domain RG53_RS17265 PF12805 FUSC-like inner membrane protein yccS RG53_RS17270 PF00202 Aminotransferase class-III RG53_RS17275 PF00117 Glutamine amidotransferase class-I RG53_RS17280 PF02661 Fic/DOC family RG53_RS17285 PF10832 Protein of unknown function (DUF2559) RG53_RS17290 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RG53_RS17295 PF07690 Major Facilitator Superfamily RG53_RS17300 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RG53_RS17300 PF04324 BFD-like [2Fe-2S] binding domain RG53_RS17300 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RG53_RS17300 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG53_RS17300 PF18267 Rubredoxin NAD+ reductase C-terminal domain RG53_RS17305 PF13806 Rieske-like [2Fe-2S] domain RG53_RS17310 PF01226 Formate/nitrite transporter RG53_RS17315 PF14824 Sirohaem biosynthesis protein central RG53_RS17315 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RG53_RS17315 PF10414 Sirohaem synthase dimerisation region RG53_RS17320 PF13978 Protein of unknown function (DUF4223) RG53_RS17325 PF13520 Amino acid permease RG53_RS17330 PF01380 SIS domain RG53_RS17335 PF01261 Xylose isomerase-like TIM barrel RG53_RS17340 PF01261 Xylose isomerase-like TIM barrel RG53_RS17345 PF00294 pfkB family carbohydrate kinase RG53_RS17350 PF00392 Bacterial regulatory proteins, gntR family RG53_RS17350 PF07702 UTRA domain RG53_RS17355 PF00155 Aminotransferase class I and II RG53_RS17360 PF10797 Protein of unknown function RG53_RS17365 PF10941 Protein of unknown function DUF2620 RG53_RS17370 PF02126 Phosphotriesterase family RG53_RS17375 PF01676 Metalloenzyme superfamily RG53_RS17380 PF01168 Alanine racemase, N-terminal domain RG53_RS17390 PF14503 YhfZ C-terminal domain RG53_RS17390 PF14502 Helix-turn-helix domain RG53_RS17395 PF00579 tRNA synthetases class I (W and Y) RG53_RS17400 PF13419 Haloacid dehalogenase-like hydrolase RG53_RS17405 PF00834 Ribulose-phosphate 3 epimerase family RG53_RS17410 PF02086 D12 class N6 adenine-specific DNA methyltransferase RG53_RS17415 PF05036 Sporulation related domain RG53_RS17420 PF01761 3-dehydroquinate synthase RG53_RS17425 PF01202 Shikimate kinase RG53_RS17430 PF03958 Bacterial type II/III secretion system short domain RG53_RS17430 PF00263 Bacterial type II and III secretion system protein RG53_RS17435 PF10748 DNA utilization proteins HofP RG53_RS17445 PF05137 Fimbrial assembly protein (PilN) RG53_RS17455 PF17092 Penicillin-binding protein OB-like domain RG53_RS17455 PF00912 Transglycosylase RG53_RS17455 PF00905 Penicillin binding protein transpeptidase domain RG53_RS17460 PF00293 NUDIX domain RG53_RS17465 PF07095 Intracellular growth attenuator protein IgaA RG53_RS17470 PF13419 Haloacid dehalogenase-like hydrolase RG53_RS17475 PF01479 S4 domain RG53_RS17480 PF01430 Hsp33 protein RG53_RS17485 PF13687 Domain of unknown function (DUF4153) RG53_RS17495 PF01293 Phosphoenolpyruvate carboxykinase RG53_RS17510 PF00672 HAMP domain RG53_RS17510 PF00512 His Kinase A (phospho-acceptor) domain RG53_RS17510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG53_RS17515 PF00072 Response regulator receiver domain RG53_RS17515 PF00486 Transcriptional regulatory protein, C terminal RG53_RS17525 PF01272 Transcription elongation factor, GreA/GreB, C-term RG53_RS17525 PF03449 Transcription elongation factor, N-terminal RG53_RS17530 PF17674 HHH domain RG53_RS17530 PF00575 S1 RNA binding domain RG53_RS17530 PF16921 Tex protein YqgF-like domain RG53_RS17530 PF09371 Tex-like protein N-terminal domain RG53_RS17540 PF04023 FeoA domain RG53_RS17545 PF02421 Ferrous iron transport protein B RG53_RS17545 PF07670 Nucleoside recognition RG53_RS17545 PF17910 FeoB cytosolic helical domain RG53_RS17545 PF07664 Ferrous iron transport protein B C terminus RG53_RS17550 PF09012 FeoC like transcriptional regulator RG53_RS17560 PF04754 Putative transposase, YhgA-like RG53_RS17565 PF04754 Putative transposase, YhgA-like RG53_RS17570 PF00561 alpha/beta hydrolase fold RG53_RS17575 PF00156 Phosphoribosyl transferase domain RG53_RS17580 PF01521 Iron-sulphur cluster biosynthesis RG53_RS17580 PF01106 NifU-like domain RG53_RS17585 PF02447 GntP family permease RG53_RS17590 PF02446 4-alpha-glucanotransferase RG53_RS17595 PF00343 Carbohydrate phosphorylase RG53_RS17600 PF17874 MalT-like TPR region RG53_RS17600 PF00196 Bacterial regulatory proteins, luxR family RG53_RS17610 PF01139 tRNA-splicing ligase RtcB RG53_RS17615 PF06956 Regulator of RNA terminal phosphate cyclase RG53_RS17615 PF00158 Sigma-54 interaction domain RG53_RS17620 PF00455 DeoR C terminal sensor domain RG53_RS17620 PF08220 DeoR-like helix-turn-helix domain RG53_RS17625 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease RG53_RS17625 PF01694 Rhomboid family RG53_RS17630 PF00581 Rhodanese-like domain RG53_RS17635 PF16901 C-terminal domain of alpha-glycerophosphate oxidase RG53_RS17635 PF01266 FAD dependent oxidoreductase RG53_RS17660 PF00343 Carbohydrate phosphorylase RG53_RS17665 PF00534 Glycosyl transferases group 1 RG53_RS17665 PF08323 Starch synthase catalytic domain RG53_RS17670 PF00483 Nucleotidyl transferase RG53_RS17675 PF00128 Alpha amylase, catalytic domain RG53_RS17675 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RG53_RS17675 PF18390 Glycogen debranching enzyme C-terminal domain RG53_RS17680 PF02806 Alpha amylase, C-terminal all-beta domain RG53_RS17680 PF00128 Alpha amylase, catalytic domain RG53_RS17680 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RG53_RS17685 PF02774 Semialdehyde dehydrogenase, dimerisation domain RG53_RS17685 PF01118 Semialdehyde dehydrogenase, NAD binding domain RG53_RS17690 PF01914 MarC family integral membrane protein RG53_RS17695 PF02447 GntP family permease RG53_RS17700 PF01202 Shikimate kinase RG53_RS17705 PF00356 Bacterial regulatory proteins, lacI family RG53_RS17705 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RG53_RS17710 PF02678 Pirin RG53_RS17710 PF17954 Quercetinase C-terminal cupin domain RG53_RS17715 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RG53_RS17715 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RG53_RS17720 PF00583 Acetyltransferase (GNAT) family RG53_RS17725 PF05638 Type VI secretion system effector, Hcp RG53_RS17740 PF15567 Immunity protein 35 RG53_RS17750 PF10956 Protein of unknown function (DUF2756) RG53_RS17755 PF03009 Glycerophosphoryl diester phosphodiesterase family RG53_RS17760 PF17912 MalK OB fold domain RG53_RS17760 PF00005 ABC transporter RG53_RS17765 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS17770 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS17775 PF13416 Bacterial extracellular solute-binding protein RG53_RS17780 PF00005 ABC transporter RG53_RS17785 PF00005 ABC transporter RG53_RS17785 PF12399 Branched-chain amino acid ATP-binding cassette transporter RG53_RS17790 PF11862 Domain of unknown function (DUF3382) RG53_RS17790 PF02653 Branched-chain amino acid transport system / permease component RG53_RS17795 PF02653 Branched-chain amino acid transport system / permease component RG53_RS17800 PF13458 Periplasmic binding protein RG53_RS17810 PF12568 Acetyltransferase (GNAT) domain, PanZ RG53_RS17815 PF13458 Periplasmic binding protein RG53_RS17820 PF04542 Sigma-70 region 2 RG53_RS17820 PF04545 Sigma-70, region 4 RG53_RS17825 PF18075 FtsX extracellular domain RG53_RS17825 PF02687 FtsX-like permease family RG53_RS17830 PF00005 ABC transporter RG53_RS17835 PF02881 SRP54-type protein, helical bundle domain RG53_RS17835 PF00448 SRP54-type protein, GTPase domain RG53_RS17845 PF06611 Protein of unknown function (DUF1145) RG53_RS17850 PF10694 Protein of unknown function (DUF2500) RG53_RS17855 PF07947 YhhN family RG53_RS17860 PF00403 Heavy-metal-associated domain RG53_RS17865 PF01206 Sulfurtransferase TusA RG53_RS17870 PF02592 Putative vitamin uptake transporter RG53_RS17875 PF08786 DcrB RG53_RS17880 PF07690 Major Facilitator Superfamily RG53_RS17885 PF01594 AI-2E family transporter RG53_RS17890 PF01648 4'-phosphopantetheinyl transferase superfamily RG53_RS17895 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RG53_RS17900 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS17905 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS17910 PF00005 ABC transporter RG53_RS17915 PF00005 ABC transporter RG53_RS17920 PF08753 NikR C terminal nickel binding domain RG53_RS17920 PF01402 Ribbon-helix-helix protein, copG family RG53_RS17940 PF00005 ABC transporter RG53_RS17945 PF13533 Biotin-lipoyl like RG53_RS17950 PF13258 Domain of unknown function (DUF4049) RG53_RS17970 PF10951 Protein of unknown function (DUF2776) RG53_RS17980 PF01384 Phosphate transporter family RG53_RS17985 PF10625 Universal stress protein B (UspB) RG53_RS17990 PF00582 Universal stress protein family RG53_RS18000 PF00854 POT family RG53_RS18005 PF04445 Putative SAM-dependent methyltransferase RG53_RS18010 PF01432 Peptidase family M3 RG53_RS18015 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ RG53_RS18020 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG53_RS18020 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RG53_RS18035 PF01022 Bacterial regulatory protein, arsR family RG53_RS18040 PF02040 Arsenical pump membrane protein RG53_RS18045 PF03960 ArsC family RG53_RS18065 PF03843 Outer membrane lipoprotein Slp family RG53_RS18075 PF00196 Bacterial regulatory proteins, luxR family RG53_RS18080 PF02308 MgtC family RG53_RS18085 PF06411 HdeA/HdeB family RG53_RS18090 PF06411 HdeA/HdeB family RG53_RS18095 PF03729 Short repeat of unknown function (DUF308) RG53_RS18100 PF00196 Bacterial regulatory proteins, luxR family RG53_RS18110 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RG53_RS18110 PF00529 HlyD membrane-fusion protein of T1SS RG53_RS18115 PF00873 AcrB/AcrD/AcrF family RG53_RS18125 PF12833 Helix-turn-helix domain RG53_RS18130 PF12833 Helix-turn-helix domain RG53_RS18135 PF00282 Pyridoxal-dependent decarboxylase conserved domain RG53_RS18140 PF14376 Haem-binding domain RG53_RS18140 PF00034 Cytochrome c RG53_RS18140 PF03150 Di-haem cytochrome c peroxidase RG53_RS18145 PF01204 Trehalase RG53_RS18150 PF00196 Bacterial regulatory proteins, luxR family RG53_RS18155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG53_RS18155 PF03466 LysR substrate binding domain RG53_RS18160 PF03631 Virulence factor BrkB RG53_RS18165 PF00083 Sugar (and other) transporter RG53_RS18165 PF07690 Major Facilitator Superfamily RG53_RS18170 PF05170 AsmA family RG53_RS18175 PF00563 EAL domain RG53_RS18185 PF00294 pfkB family carbohydrate kinase RG53_RS18190 PF05193 Peptidase M16 inactive domain RG53_RS18190 PF00675 Insulinase (Peptidase family M16) RG53_RS18200 PF00375 Sodium:dicarboxylate symporter family RG53_RS18210 PF00672 HAMP domain RG53_RS18210 PF17154 Gammaproteobacterial periplasmic sensor domain RG53_RS18210 PF00563 EAL domain RG53_RS18210 PF00990 Diguanylate cyclase, GGDEF domain RG53_RS18215 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) RG53_RS18220 PF01270 Glycosyl hydrolases family 8 RG53_RS18225 PF03170 Bacterial cellulose synthase subunit RG53_RS18230 PF07238 PilZ domain RG53_RS18230 PF03552 Cellulose synthase RG53_RS18230 PF00535 Glycosyl transferase family 2 RG53_RS18235 PF06564 Cellulose biosynthesis protein BcsQ RG53_RS18240 PF10995 Cellulose biosynthesis GIL RG53_RS18245 PF11120 Cellulose biosynthesis protein BcsF RG53_RS18250 PF11658 Cellulose biosynthesis protein BcsG RG53_RS18255 PF13940 Toxin Ldr, type I toxin-antitoxin system RG53_RS18260 PF13940 Toxin Ldr, type I toxin-antitoxin system RG53_RS18270 PF13940 Toxin Ldr, type I toxin-antitoxin system RG53_RS18280 PF03222 Tryptophan/tyrosine permease family RG53_RS18285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RG53_RS18285 PF00005 ABC transporter RG53_RS18290 PF00005 ABC transporter RG53_RS18290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RG53_RS18295 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS18295 PF12911 N-terminal TM domain of oligopeptide transport permease C RG53_RS18300 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS18305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RG53_RS18325 PF00884 Sulfatase RG53_RS18325 PF08019 Phosphoethanolamine transferase EptA/EptB RG53_RS18330 PF07690 Major Facilitator Superfamily RG53_RS18340 PF03797 Autotransporter beta-domain RG53_RS18345 PF03352 Methyladenine glycosylase RG53_RS18350 PF00583 Acetyltransferase (GNAT) family RG53_RS18355 PF00384 Molybdopterin oxidoreductase RG53_RS18355 PF18364 Molybdopterin oxidoreductase N-terminal domain RG53_RS18355 PF01568 Molydopterin dinucleotide binding domain RG53_RS18360 PF00691 OmpA family RG53_RS18360 PF13488 Glycine zipper RG53_RS18365 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RG53_RS18365 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RG53_RS18370 PF11254 Protein of unknown function (DUF3053) RG53_RS18375 PF01381 Helix-turn-helix RG53_RS18380 PF00313 'Cold-shock' DNA-binding domain RG53_RS18385 PF01848 Hok/gef family RG53_RS18390 PF05746 DALR anticodon binding domain RG53_RS18390 PF02092 Glycyl-tRNA synthetase beta subunit RG53_RS18395 PF02091 Glycyl-tRNA synthetase alpha subunit RG53_RS18400 PF13983 YsaB-like lipoprotein RG53_RS18405 PF01757 Acyltransferase family RG53_RS18410 PF05360 yiaA/B two helix domain RG53_RS18415 PF05360 yiaA/B two helix domain RG53_RS18420 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RG53_RS18420 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RG53_RS18430 PF13407 Periplasmic binding protein domain RG53_RS18435 PF00005 ABC transporter RG53_RS18440 PF02653 Branched-chain amino acid transport system / permease component RG53_RS18445 PF12833 Helix-turn-helix domain RG53_RS18450 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase RG53_RS18455 PF00128 Alpha amylase, catalytic domain RG53_RS18460 PF00155 Aminotransferase class I and II RG53_RS18465 PF13247 4Fe-4S dicluster domain RG53_RS18470 PF01614 Bacterial transcriptional regulator RG53_RS18470 PF09339 IclR helix-turn-helix domain RG53_RS18475 PF02615 Malate/L-lactate dehydrogenase RG53_RS18480 PF04074 YhcH/YjgK/YiaL RG53_RS18485 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component RG53_RS18490 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RG53_RS18495 PF03480 Bacterial extracellular solute-binding protein, family 7 RG53_RS18500 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RG53_RS18500 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RG53_RS18505 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RG53_RS18510 PF01261 Xylose isomerase-like TIM barrel RG53_RS18515 PF00596 Class II Aldolase and Adducin N-terminal domain RG53_RS18520 PF06629 MltA-interacting protein MipA RG53_RS18525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG53_RS18525 PF03466 LysR substrate binding domain RG53_RS18530 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RG53_RS18530 PF00529 HlyD membrane-fusion protein of T1SS RG53_RS18535 PF11742 Protein of unknown function (DUF3302) RG53_RS18545 PF00171 Aldehyde dehydrogenase family RG53_RS18550 PF00465 Iron-containing alcohol dehydrogenase RG53_RS18555 PF00009 Elongation factor Tu GTP binding domain RG53_RS18555 PF03144 Elongation factor Tu domain 2 RG53_RS18555 PF09107 Elongation factor SelB, winged helix RG53_RS18555 PF09106 Elongation factor SelB, winged helix RG53_RS18560 PF12390 Selenocysteine synthase N terminal RG53_RS18560 PF03841 L-seryl-tRNA selenium transferase RG53_RS18565 PF13417 Glutathione S-transferase, N-terminal domain RG53_RS18565 PF00043 Glutathione S-transferase, C-terminal domain RG53_RS18570 PF05593 RHS Repeat RG53_RS18570 PF03527 RHS protein RG53_RS18570 PF14220 Domain of unknown function (DUF4329) RG53_RS18575 PF15631 NTF2 fold immunity protein RG53_RS18580 PF03130 PBS lyase HEAT-like repeat RG53_RS18585 PF03527 RHS protein RG53_RS18610 PF15596 Immunity protein 57 RG53_RS18615 PF00529 HlyD membrane-fusion protein of T1SS RG53_RS18615 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RG53_RS18620 PF11742 Protein of unknown function (DUF3302) RG53_RS18625 PF02378 Phosphotransferase system, EIIC RG53_RS18625 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RG53_RS18625 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RG53_RS18630 PF01232 Mannitol dehydrogenase Rossmann domain RG53_RS18630 PF08125 Mannitol dehydrogenase C-terminal domain RG53_RS18635 PF05068 Mannitol repressor RG53_RS18645 PF10928 Protein of unknown function (DUF2810) RG53_RS18655 PF11622 Protein of unknown function (DUF3251) RG53_RS18660 PF03895 YadA-like membrane anchor domain RG53_RS18660 PF05658 Head domain of trimeric autotransporter adhesin RG53_RS18660 PF05662 Coiled stalk of trimeric autotransporter adhesin RG53_RS18660 PF13018 Extended Signal Peptide of Type V secretion system RG53_RS18665 PF02652 L-lactate permease RG53_RS18670 PF07729 FCD domain RG53_RS18670 PF00392 Bacterial regulatory proteins, gntR family RG53_RS18675 PF01070 FMN-dependent dehydrogenase RG53_RS18680 PF00588 SpoU rRNA Methylase family RG53_RS18685 PF06426 Serine acetyltransferase, N-terminal RG53_RS18685 PF00132 Bacterial transferase hexapeptide (six repeats) RG53_RS18690 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus RG53_RS18690 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus RG53_RS18695 PF02556 Preprotein translocase subunit SecB RG53_RS18700 PF00462 Glutaredoxin RG53_RS18705 PF00581 Rhodanese-like domain RG53_RS18715 PF01676 Metalloenzyme superfamily RG53_RS18715 PF06415 BPG-independent PGAM N-terminus (iPGM_N) RG53_RS18720 PF01551 Peptidase family M23 RG53_RS18725 PF04748 Divergent polysaccharide deacetylase RG53_RS18730 PF00535 Glycosyl transferase family 2 RG53_RS18735 PF08240 Alcohol dehydrogenase GroES-like domain RG53_RS18735 PF00107 Zinc-binding dehydrogenase RG53_RS18740 PF00155 Aminotransferase class I and II RG53_RS18745 PF01370 NAD dependent epimerase/dehydratase family RG53_RS18750 PF01075 Glycosyltransferase family 9 (heptosyltransferase) RG53_RS18755 PF01075 Glycosyltransferase family 9 (heptosyltransferase) RG53_RS18760 PF04932 O-Antigen ligase RG53_RS18765 PF00535 Glycosyl transferase family 2 RG53_RS18770 PF01501 Glycosyl transferase family 8 RG53_RS18770 PF08437 Glycosyl transferase family 8 C-terminal RG53_RS18775 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) RG53_RS18780 PF08437 Glycosyl transferase family 8 C-terminal RG53_RS18780 PF01501 Glycosyl transferase family 8 RG53_RS18785 PF01501 Glycosyl transferase family 8 RG53_RS18785 PF08437 Glycosyl transferase family 8 C-terminal RG53_RS18795 PF00534 Glycosyl transferases group 1 RG53_RS18795 PF13439 Glycosyltransferase Family 4 RG53_RS18800 PF01075 Glycosyltransferase family 9 (heptosyltransferase) RG53_RS18805 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) RG53_RS18810 PF01467 Cytidylyltransferase-like RG53_RS18815 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain RG53_RS18815 PF06827 Zinc finger found in FPG and IleRS RG53_RS18815 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain RG53_RS18820 PF00471 Ribosomal protein L33 RG53_RS18825 PF00830 Ribosomal L28 family RG53_RS18830 PF04002 RadC-like JAB domain RG53_RS18835 PF02441 Flavoprotein RG53_RS18835 PF04127 DNA / pantothenate metabolism flavoprotein RG53_RS18840 PF00692 dUTPase RG53_RS18845 PF00440 Bacterial regulatory proteins, tetR family RG53_RS18850 PF00156 Phosphoribosyl transferase domain RG53_RS18855 PF03725 3' exoribonuclease family, domain 2 RG53_RS18855 PF01138 3' exoribonuclease family, domain 1 RG53_RS18865 PF03755 YicC-like family, N-terminal region RG53_RS18865 PF08340 Domain of unknown function (DUF1732) RG53_RS18875 PF03458 UPF0126 domain RG53_RS18880 PF03120 NAD-dependent DNA ligase OB-fold domain RG53_RS18880 PF01653 NAD-dependent DNA ligase adenylation domain RG53_RS18885 PF00625 Guanylate kinase RG53_RS18890 PF01192 RNA polymerase Rpb6 RG53_RS18895 PF04607 Region found in RelA / SpoT proteins RG53_RS18895 PF02824 TGS domain RG53_RS18895 PF13291 ACT domain RG53_RS18900 PF12105 SpoU, rRNA methylase, C-terminal RG53_RS18900 PF00588 SpoU rRNA Methylase family RG53_RS18905 PF00271 Helicase conserved C-terminal domain RG53_RS18905 PF00270 DEAD/DEAH box helicase RG53_RS18905 PF17191 RecG wedge domain RG53_RS18915 PF03616 Sodium/glutamate symporter RG53_RS18920 PF00860 Permease family RG53_RS18925 PF05170 AsmA family RG53_RS18930 PF01055 Glycosyl hydrolases family 31 RG53_RS18930 PF13802 Galactose mutarotase-like RG53_RS18945 PF14659 Phage integrase, N-terminal SAM-like domain RG53_RS18945 PF00589 Phage integrase family RG53_RS18945 PF13356 Arm DNA-binding domain RG53_RS18965 PF04606 Ogr/Delta-like zinc finger RG53_RS18995 PF17345 Family of unknown function (DUF5375) RG53_RS19015 PF07690 Major Facilitator Superfamily RG53_RS19020 PF00892 EamA-like transporter family RG53_RS19025 PF03180 NLPA lipoprotein RG53_RS19045 PF07690 Major Facilitator Superfamily RG53_RS19055 PF06711 Protein of unknown function (DUF1198) RG53_RS19060 PF00860 Permease family RG53_RS19065 PF01979 Amidohydrolase family RG53_RS19065 PF13382 Adenine deaminase C-terminal domain RG53_RS19070 PF07690 Major Facilitator Superfamily RG53_RS19075 PF07690 Major Facilitator Superfamily RG53_RS19080 PF07730 Histidine kinase RG53_RS19080 PF05231 MASE1 RG53_RS19080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG53_RS19085 PF00072 Response regulator receiver domain RG53_RS19085 PF00196 Bacterial regulatory proteins, luxR family RG53_RS19090 PF01842 ACT domain RG53_RS19095 PF00205 Thiamine pyrophosphate enzyme, central domain RG53_RS19095 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RG53_RS19095 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RG53_RS19100 PF08049 IlvB leader peptide RG53_RS19120 PF13939 Toxin TisB, type I toxin-antitoxin system RG53_RS19130 PF07690 Major Facilitator Superfamily RG53_RS19140 PF02656 Domain of unknown function (DUF202) RG53_RS19145 PF02656 Domain of unknown function (DUF202) RG53_RS19155 PF16347 Domain of unknown function (DUF4976) RG53_RS19155 PF00884 Sulfatase RG53_RS19160 PF00474 Sodium:solute symporter family RG53_RS19165 PF02311 AraC-like ligand binding domain RG53_RS19165 PF12833 Helix-turn-helix domain RG53_RS19170 PF02056 Family 4 glycosyl hydrolase RG53_RS19170 PF11975 Family 4 glycosyl hydrolase C-terminal domain RG53_RS19175 PF02056 Family 4 glycosyl hydrolase RG53_RS19180 PF00367 phosphotransferase system, EIIB RG53_RS19180 PF02378 Phosphotransferase system, EIIC RG53_RS19185 PF00392 Bacterial regulatory proteins, gntR family RG53_RS19185 PF07702 UTRA domain RG53_RS19190 PF06826 Predicted Permease Membrane Region RG53_RS19190 PF02080 TrkA-C domain RG53_RS19200 PF00011 Hsp20/alpha crystallin family RG53_RS19205 PF00011 Hsp20/alpha crystallin family RG53_RS19210 PF07119 Protein of unknown function (DUF1375) RG53_RS19215 PF12566 Protein of unknown function (DUF3748) RG53_RS19215 PF07676 WD40-like Beta Propeller Repeat RG53_RS19220 PF01494 FAD binding domain RG53_RS19225 PF07690 Major Facilitator Superfamily RG53_RS19230 PF13378 Enolase C-terminal domain-like RG53_RS19230 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RG53_RS19235 PF01081 KDPG and KHG aldolase RG53_RS19240 PF05035 2-keto-3-deoxy-galactonokinase RG53_RS19245 PF07729 FCD domain RG53_RS19245 PF00392 Bacterial regulatory proteins, gntR family RG53_RS19260 PF06078 Bacterial protein of unknown function (DUF937) RG53_RS19265 PF18053 DNA gyrase B subunit insert domain RG53_RS19265 PF00204 DNA gyrase B RG53_RS19265 PF00986 DNA gyrase B subunit, carboxyl terminus RG53_RS19265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG53_RS19265 PF01751 Toprim domain RG53_RS19270 PF02463 RecF/RecN/SMC N terminal domain RG53_RS19275 PF00712 DNA polymerase III beta subunit, N-terminal domain RG53_RS19275 PF02767 DNA polymerase III beta subunit, central domain RG53_RS19275 PF02768 DNA polymerase III beta subunit, C-terminal domain RG53_RS19280 PF08299 Bacterial dnaA protein helix-turn-helix RG53_RS19280 PF00308 Bacterial dnaA protein RG53_RS19280 PF11638 DnaA N-terminal domain RG53_RS19290 PF00468 Ribosomal protein L34 RG53_RS19295 PF00825 Ribonuclease P RG53_RS19300 PF01809 Putative membrane protein insertion efficiency factor RG53_RS19305 PF14849 YidC periplasmic domain RG53_RS19305 PF02096 60Kd inner membrane protein RG53_RS19310 PF10396 GTP-binding protein TrmE N-terminus RG53_RS19310 PF12631 MnmE helical domain RG53_RS19310 PF01926 50S ribosome-binding GTPase RG53_RS19315 PF08053 Tryptophanase operon leader peptide RG53_RS19320 PF01212 Beta-eliminating lyase RG53_RS19325 PF03222 Tryptophan/tyrosine permease family RG53_RS19330 PF07690 Major Facilitator Superfamily RG53_RS19335 PF03466 LysR substrate binding domain RG53_RS19335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG53_RS19345 PF03358 NADPH-dependent FMN reductase RG53_RS19350 PF00860 Permease family RG53_RS19355 PF13419 Haloacid dehalogenase-like hydrolase RG53_RS19365 PF03691 Uncharacterised protein family (UPF0167) RG53_RS19370 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase RG53_RS19375 PF00756 Putative esterase RG53_RS19375 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RG53_RS19380 PF11471 Maltoporin periplasmic N-terminal extension RG53_RS19380 PF02264 LamB porin RG53_RS19385 PF00232 Glycosyl hydrolase family 1 RG53_RS19390 PF02378 Phosphotransferase system, EIIC RG53_RS19390 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RG53_RS19390 PF00367 phosphotransferase system, EIIB RG53_RS19395 PF00874 PRD domain RG53_RS19395 PF03123 CAT RNA binding domain RG53_RS19400 PF01895 PhoU domain RG53_RS19405 PF00005 ABC transporter RG53_RS19410 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS19415 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS19420 PF12849 PBP superfamily domain RG53_RS19430 PF00577 Outer membrane usher protein RG53_RS19430 PF13954 PapC N-terminal domain RG53_RS19430 PF13953 PapC C-terminal domain RG53_RS19435 PF02753 Pili assembly chaperone PapD, C-terminal domain RG53_RS19435 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RG53_RS19440 PF00419 Fimbrial protein RG53_RS19445 PF01380 SIS domain RG53_RS19450 PF14602 Hexapeptide repeat of succinyl-transferase RG53_RS19450 PF12804 MobA-like NTP transferase domain RG53_RS19450 PF00132 Bacterial transferase hexapeptide (six repeats) RG53_RS19460 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain RG53_RS19460 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain RG53_RS19465 PF02874 ATP synthase alpha/beta family, beta-barrel domain RG53_RS19465 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RG53_RS19470 PF00231 ATP synthase RG53_RS19475 PF02874 ATP synthase alpha/beta family, beta-barrel domain RG53_RS19475 PF00306 ATP synthase alpha/beta chain, C terminal domain RG53_RS19475 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RG53_RS19480 PF00213 ATP synthase delta (OSCP) subunit RG53_RS19485 PF00430 ATP synthase B/B' CF(0) RG53_RS19490 PF00137 ATP synthase subunit C RG53_RS19495 PF00119 ATP synthase A chain RG53_RS19500 PF03899 ATP synthase I chain RG53_RS19505 PF02527 rRNA small subunit methyltransferase G RG53_RS19510 PF01134 Glucose inhibited division protein A RG53_RS19510 PF13932 GidA associated domain RG53_RS19515 PF00258 Flavodoxin RG53_RS19520 PF01037 Lrp/AsnC ligand binding domain RG53_RS19525 PF03590 Aspartate-ammonia ligase RG53_RS19530 PF05762 VWA domain containing CoxE-like protein RG53_RS19535 PF07728 AAA domain (dynein-related subfamily) RG53_RS19535 PF12592 Protein of unknown function (DUF3763) RG53_RS19535 PF17868 AAA lid domain RG53_RS19540 PF02705 K+ potassium transporter RG53_RS19545 PF05025 RbsD / FucU transport protein family RG53_RS19550 PF00005 ABC transporter RG53_RS19555 PF02653 Branched-chain amino acid transport system / permease component RG53_RS19560 PF13407 Periplasmic binding protein domain RG53_RS19565 PF00294 pfkB family carbohydrate kinase RG53_RS19570 PF00356 Bacterial regulatory proteins, lacI family RG53_RS19575 PF07690 Major Facilitator Superfamily RG53_RS19580 PF07729 FCD domain RG53_RS19580 PF00392 Bacterial regulatory proteins, gntR family RG53_RS19620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG53_RS19620 PF03466 LysR substrate binding domain RG53_RS19625 PF04219 Protein of unknown function, DUF RG53_RS19630 PF01078 Magnesium chelatase, subunit ChlI RG53_RS19630 PF13335 Magnesium chelatase, subunit ChlI C-terminal RG53_RS19635 PF08046 IlvGEDA operon leader peptide RG53_RS19640 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RG53_RS19640 PF00205 Thiamine pyrophosphate enzyme, central domain RG53_RS19640 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RG53_RS19650 PF01063 Amino-transferase class IV RG53_RS19655 PF00920 Dehydratase family RG53_RS19660 PF00585 C-terminal regulatory domain of Threonine dehydratase RG53_RS19660 PF00291 Pyridoxal-phosphate dependent enzyme RG53_RS19665 PF01548 Transposase RG53_RS19665 PF02371 Transposase IS116/IS110/IS902 family RG53_RS19670 PF03466 LysR substrate binding domain RG53_RS19670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG53_RS19675 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain RG53_RS19675 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain RG53_RS19685 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system RG53_RS19690 PF00580 UvrD/REP helicase N-terminal domain RG53_RS19690 PF13361 UvrD-like helicase C-terminal domain RG53_RS19695 PF02541 Ppx/GppA phosphatase family RG53_RS19705 PF00270 DEAD/DEAH box helicase RG53_RS19705 PF00271 Helicase conserved C-terminal domain RG53_RS19710 PF00085 Thioredoxin RG53_RS19720 PF07497 Rho termination factor, RNA-binding domain RG53_RS19720 PF07498 Rho termination factor, N-terminal domain RG53_RS19720 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RG53_RS19730 PF00953 Glycosyl transferase family 4 RG53_RS19735 PF02706 Chain length determinant protein RG53_RS19740 PF02350 UDP-N-acetylglucosamine 2-epimerase RG53_RS19745 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RG53_RS19745 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RG53_RS19745 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RG53_RS19750 PF16363 GDP-mannose 4,6 dehydratase RG53_RS19755 PF00483 Nucleotidyl transferase RG53_RS19765 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RG53_RS19770 PF01943 Polysaccharide biosynthesis protein RG53_RS19775 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 RG53_RS19780 PF06899 WzyE protein, O-antigen assembly polymerase RG53_RS19785 PF03808 Glycosyl transferase WecB/TagA/CpsF family RG53_RS19790 PF00324 Amino acid permease RG53_RS19815 PF13186 Iron-sulfur cluster-binding domain RG53_RS19815 PF04055 Radical SAM superfamily RG53_RS19820 PF00884 Sulfatase RG53_RS19825 PF07219 HemY protein N-terminus RG53_RS19825 PF07719 Tetratricopeptide repeat RG53_RS19830 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase RG53_RS19835 PF02602 Uroporphyrinogen-III synthase HemD RG53_RS19840 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain RG53_RS19840 PF03900 Porphobilinogen deaminase, C-terminal domain RG53_RS19850 PF01295 Adenylate cyclase, class-I RG53_RS19850 PF12633 Adenylate cyclase NT domain RG53_RS19855 PF01491 Frataxin-like domain RG53_RS19880 PF13627 Prokaryotic lipoprotein-attachment site RG53_RS19885 PF01678 Diaminopimelate epimerase RG53_RS19890 PF04340 Protein of unknown function, DUF484 RG53_RS19895 PF00589 Phage integrase family RG53_RS19895 PF02899 Phage integrase, N-terminal SAM-like domain RG53_RS19900 PF13419 Haloacid dehalogenase-like hydrolase RG53_RS19905 PF13361 UvrD-like helicase C-terminal domain RG53_RS19905 PF00580 UvrD/REP helicase N-terminal domain RG53_RS19910 PF09992 Phosphodiester glycosidase RG53_RS19920 PF01544 CorA-like Mg2+ transporter protein RG53_RS19935 PF01544 CorA-like Mg2+ transporter protein RG53_RS19950 PF00892 EamA-like transporter family RG53_RS19955 PF03061 Thioesterase superfamily RG53_RS19960 PF02253 Phospholipase A1 RG53_RS19965 PF00271 Helicase conserved C-terminal domain RG53_RS19965 PF00270 DEAD/DEAH box helicase RG53_RS19965 PF09382 RQC domain RG53_RS19965 PF16124 RecQ zinc-binding RG53_RS19965 PF00570 HRDC domain RG53_RS19970 PF01810 LysE type translocator RG53_RS19975 PF01810 LysE type translocator RG53_RS19980 PF12146 Serine aminopeptidase, S33 RG53_RS19990 PF00892 EamA-like transporter family RG53_RS19995 PF03466 LysR substrate binding domain RG53_RS19995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG53_RS20000 PF01717 Cobalamin-independent synthase, Catalytic domain RG53_RS20000 PF08267 Cobalamin-independent synthase, N-terminal domain RG53_RS20005 PF01738 Dienelactone hydrolase family RG53_RS20010 PF01048 Phosphorylase superfamily RG53_RS20020 PF02646 RmuC family RG53_RS20025 PF01209 ubiE/COQ5 methyltransferase family RG53_RS20030 PF02036 SCP-2 sterol transfer family RG53_RS20035 PF03109 ABC1 family RG53_RS20040 PF02416 mttA/Hcf106 family RG53_RS20050 PF00902 Sec-independent protein translocase protein (TatC) RG53_RS20055 PF01026 TatD related DNase RG53_RS20060 PF02357 Transcription termination factor nusG RG53_RS20065 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase RG53_RS20070 PF00970 Oxidoreductase FAD-binding domain RG53_RS20070 PF00175 Oxidoreductase NAD-binding domain RG53_RS20075 PF02803 Thiolase, C-terminal domain RG53_RS20075 PF00108 Thiolase, N-terminal domain RG53_RS20080 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RG53_RS20080 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RG53_RS20080 PF00378 Enoyl-CoA hydratase/isomerase RG53_RS20085 PF00557 Metallopeptidase family M24 RG53_RS20090 PF09186 Domain of unknown function (DUF1949) RG53_RS20090 PF01205 Uncharacterized protein family UPF0029 RG53_RS20095 PF02386 Cation transport protein RG53_RS20100 PF12724 Flavodoxin domain RG53_RS20125 PF03205 Molybdopterin guanine dinucleotide synthesis protein B RG53_RS20130 PF12804 MobA-like NTP transferase domain RG53_RS20135 PF06288 Protein of unknown function (DUF1040) RG53_RS20140 PF01636 Phosphotransferase enzyme family RG53_RS20145 PF01323 DSBA-like thioredoxin domain RG53_RS20150 PF06097 Bacterial protein of unknown function (DUF945) RG53_RS20155 PF01553 Acyltransferase RG53_RS20165 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RG53_RS20165 PF00476 DNA polymerase family A RG53_RS20165 PF01367 5'-3' exonuclease, C-terminal SAM fold RG53_RS20165 PF01612 3'-5' exonuclease RG53_RS20170 PF01926 50S ribosome-binding GTPase RG53_RS20180 PF04220 Der GTPase activator (YihI) RG53_RS20185 PF06969 HemN C-terminal domain RG53_RS20185 PF04055 Radical SAM superfamily RG53_RS20195 PF00072 Response regulator receiver domain RG53_RS20195 PF00158 Sigma-54 interaction domain RG53_RS20195 PF02954 Bacterial regulatory protein, Fis family RG53_RS20200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG53_RS20200 PF00989 PAS fold RG53_RS20200 PF00512 His Kinase A (phospho-acceptor) domain RG53_RS20205 PF03951 Glutamine synthetase, beta-Grasp domain RG53_RS20205 PF00120 Glutamine synthetase, catalytic domain RG53_RS20215 PF03144 Elongation factor Tu domain 2 RG53_RS20215 PF00009 Elongation factor Tu GTP binding domain RG53_RS20215 PF00679 Elongation factor G C-terminus RG53_RS20220 PF07702 UTRA domain RG53_RS20220 PF00392 Bacterial regulatory proteins, gntR family RG53_RS20225 PF01261 Xylose isomerase-like TIM barrel RG53_RS20235 PF06178 Oligogalacturonate-specific porin protein (KdgM) RG53_RS20250 PF01055 Glycosyl hydrolases family 31 RG53_RS20255 PF01263 Aldose 1-epimerase RG53_RS20265 PF01791 DeoC/LacD family aldolase RG53_RS20270 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RG53_RS20270 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RG53_RS20275 PF00294 pfkB family carbohydrate kinase RG53_RS20280 PF00455 DeoR C terminal sensor domain RG53_RS20280 PF08220 DeoR-like helix-turn-helix domain RG53_RS20285 PF13419 Haloacid dehalogenase-like hydrolase RG53_RS20290 PF03631 Virulence factor BrkB RG53_RS20295 PF02580 D-Tyr-tRNA(Tyr) deacylase RG53_RS20300 PF00583 Acetyltransferase (GNAT) family RG53_RS20300 PF09500 Putative thioesterase (yiiD_Cterm) RG53_RS20305 PF07859 alpha/beta hydrolase fold RG53_RS20310 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system RG53_RS20325 PF01402 Ribbon-helix-helix protein, copG family RG53_RS20340 PF04216 Protein involved in formate dehydrogenase formation RG53_RS20345 PF01292 Prokaryotic cytochrome b561 RG53_RS20350 PF09163 Formate dehydrogenase N, transmembrane RG53_RS20350 PF13247 4Fe-4S dicluster domain RG53_RS20365 PF02634 FdhD/NarQ family RG53_RS20370 PF12889 Protein of unknown function (DUF3829) RG53_RS20375 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RG53_RS20375 PF08279 HTH domain RG53_RS20380 PF05343 M42 glutamyl aminopeptidase RG53_RS20385 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RG53_RS20385 PF02378 Phosphotransferase system, EIIC RG53_RS20390 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RG53_RS20395 PF05336 L-rhamnose mutarotase RG53_RS20400 PF00596 Class II Aldolase and Adducin N-terminal domain RG53_RS20405 PF06134 L-rhamnose isomerase (RhaA) RG53_RS20410 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RG53_RS20410 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RG53_RS20420 PF12833 Helix-turn-helix domain RG53_RS20420 PF02311 AraC-like ligand binding domain RG53_RS20425 PF12833 Helix-turn-helix domain RG53_RS20425 PF02311 AraC-like ligand binding domain RG53_RS20430 PF06379 L-rhamnose-proton symport protein (RhaT) RG53_RS20435 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RG53_RS20435 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RG53_RS20450 PF03812 2-keto-3-deoxygluconate permease RG53_RS20455 PF03473 MOSC domain RG53_RS20455 PF03475 3-alpha domain RG53_RS20460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG53_RS20460 PF00672 HAMP domain RG53_RS20460 PF16527 Two-component sensor protein CpxA, periplasmic domain RG53_RS20460 PF00512 His Kinase A (phospho-acceptor) domain RG53_RS20465 PF00486 Transcriptional regulatory protein, C terminal RG53_RS20465 PF00072 Response regulator receiver domain RG53_RS20470 PF07813 LTXXQ motif family protein RG53_RS20475 PF01545 Cation efflux family RG53_RS20475 PF16916 Dimerisation domain of Zinc Transporter RG53_RS20480 PF00365 Phosphofructokinase RG53_RS20490 PF02611 CDP-diacylglycerol pyrophosphatase RG53_RS20495 PF00121 Triosephosphate isomerase RG53_RS20505 PF07305 Protein of unknown function (DUF1454) RG53_RS20510 PF05656 Protein of unknown function (DUF805) RG53_RS20515 PF04175 Protein of unknown function (DUF406) RG53_RS20520 PF00582 Universal stress protein family RG53_RS20525 PF00175 Oxidoreductase NAD-binding domain RG53_RS20525 PF00970 Oxidoreductase FAD-binding domain RG53_RS20530 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded RG53_RS20535 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RG53_RS20535 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RG53_RS20540 PF00230 Major intrinsic protein RG53_RS20545 PF06005 Cell division protein ZapB RG53_RS20550 PF03737 Aldolase/RraA RG53_RS20555 PF01040 UbiA prenyltransferase family RG53_RS20560 PF10431 C-terminal, D2-small domain, of ClpB protein RG53_RS20560 PF00004 ATPase family associated with various cellular activities (AAA) RG53_RS20560 PF07724 AAA domain (Cdc48 subfamily) RG53_RS20565 PF00227 Proteasome subunit RG53_RS20570 PF05036 Sporulation related domain RG53_RS20575 PF00356 Bacterial regulatory proteins, lacI family RG53_RS20580 PF18319 PriA DNA helicase Cys-rich region (CRR) domain RG53_RS20580 PF18074 Primosomal protein N C-terminal domain RG53_RS20580 PF00271 Helicase conserved C-terminal domain RG53_RS20580 PF17764 3′ DNA-binding domain (3′BD) RG53_RS20580 PF00270 DEAD/DEAH box helicase RG53_RS20585 PF01197 Ribosomal protein L31 RG53_RS20590 PF14220 Domain of unknown function (DUF4329) RG53_RS20590 PF03527 RHS protein RG53_RS20590 PF05593 RHS Repeat RG53_RS20600 PF03400 IS1 transposase RG53_RS20605 PF03400 IS1 transposase RG53_RS20610 PF12759 InsA C-terminal domain RG53_RS20610 PF03811 InsA N-terminal domain RG53_RS20620 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family RG53_RS20625 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family RG53_RS20630 PF01340 Met Apo-repressor, MetJ RG53_RS20635 PF01053 Cys/Met metabolism PLP-dependent enzyme RG53_RS20640 PF03447 Homoserine dehydrogenase, NAD binding domain RG53_RS20640 PF00742 Homoserine dehydrogenase RG53_RS20640 PF00696 Amino acid kinase family RG53_RS20650 PF02219 Methylenetetrahydrofolate reductase RG53_RS20655 PF00141 Peroxidase RG53_RS20660 PF00892 EamA-like transporter family RG53_RS20665 PF06940 Domain of unknown function (DUF1287) RG53_RS20675 PF00465 Iron-containing alcohol dehydrogenase RG53_RS20680 PF00923 Transaldolase/Fructose-6-phosphate aldolase RG53_RS20685 PF05524 PEP-utilising enzyme, N-terminal RG53_RS20685 PF00381 PTS HPr component phosphorylation site RG53_RS20685 PF02896 PEP-utilising enzyme, TIM barrel domain RG53_RS20685 PF00391 PEP-utilising enzyme, mobile domain RG53_RS20685 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RG53_RS20695 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RG53_RS20700 PF02901 Pyruvate formate lyase-like RG53_RS20700 PF01228 Glycine radical RG53_RS20705 PF04055 Radical SAM superfamily RG53_RS20710 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RG53_RS20715 PF12833 Helix-turn-helix domain RG53_RS20720 PF00884 Sulfatase RG53_RS20725 PF00311 Phosphoenolpyruvate carboxylase RG53_RS20730 PF07687 Peptidase dimerisation domain RG53_RS20730 PF01546 Peptidase family M20/M25/M40 RG53_RS20735 PF02774 Semialdehyde dehydrogenase, dimerisation domain RG53_RS20735 PF01118 Semialdehyde dehydrogenase, NAD binding domain RG53_RS20740 PF00696 Amino acid kinase family RG53_RS20745 PF14698 Argininosuccinate lyase C-terminal RG53_RS20745 PF00206 Lyase RG53_RS20750 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RG53_RS20750 PF13378 Enolase C-terminal domain-like RG53_RS20755 PF07690 Major Facilitator Superfamily RG53_RS20760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG53_RS20760 PF03466 LysR substrate binding domain RG53_RS20765 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RG53_RS20765 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG53_RS20775 PF00440 Bacterial regulatory proteins, tetR family RG53_RS20780 PF07226 Protein of unknown function (DUF1422) RG53_RS20785 PF05958 tRNA (Uracil-5-)-methyltransferase RG53_RS20790 PF07715 TonB-dependent Receptor Plug Domain RG53_RS20790 PF00593 TonB dependent receptor RG53_RS20795 PF01177 Asp/Glu/Hydantoin racemase RG53_RS20825 PF01565 FAD binding domain RG53_RS20825 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain RG53_RS20830 PF08279 HTH domain RG53_RS20830 PF02237 Biotin protein ligase C terminal domain RG53_RS20830 PF03099 Biotin/lipoate A/B protein ligase family RG53_RS20835 PF00485 Phosphoribulokinase / Uridine kinase family RG53_RS20870 PF03143 Elongation factor Tu C-terminal domain RG53_RS20870 PF03144 Elongation factor Tu domain 2 RG53_RS20870 PF00009 Elongation factor Tu GTP binding domain RG53_RS20875 PF00584 SecE/Sec61-gamma subunits of protein translocation complex RG53_RS20880 PF00467 KOW motif RG53_RS20880 PF02357 Transcription termination factor nusG RG53_RS20885 PF00298 Ribosomal protein L11, RNA binding domain RG53_RS20885 PF03946 Ribosomal protein L11, N-terminal domain RG53_RS20890 PF00687 Ribosomal protein L1p/L10e family RG53_RS20900 PF00466 Ribosomal protein L10 RG53_RS20905 PF16320 Ribosomal protein L7/L12 dimerisation domain RG53_RS20905 PF00542 Ribosomal protein L7/L12 C-terminal domain RG53_RS20910 PF04561 RNA polymerase Rpb2, domain 2 RG53_RS20910 PF04563 RNA polymerase beta subunit RG53_RS20910 PF04565 RNA polymerase Rpb2, domain 3 RG53_RS20910 PF10385 RNA polymerase beta subunit external 1 domain RG53_RS20910 PF00562 RNA polymerase Rpb2, domain 6 RG53_RS20910 PF04560 RNA polymerase Rpb2, domain 7 RG53_RS20915 PF04997 RNA polymerase Rpb1, domain 1 RG53_RS20915 PF05000 RNA polymerase Rpb1, domain 4 RG53_RS20915 PF04983 RNA polymerase Rpb1, domain 3 RG53_RS20915 PF00623 RNA polymerase Rpb1, domain 2 RG53_RS20915 PF04998 RNA polymerase Rpb1, domain 5 RG53_RS20925 PF04055 Radical SAM superfamily RG53_RS20925 PF06968 Biotin and Thiamin Synthesis associated domain RG53_RS20930 PF05690 Thiazole biosynthesis protein ThiG RG53_RS20935 PF02597 ThiS family RG53_RS20940 PF00899 ThiF family RG53_RS20945 PF02581 Thiamine monophosphate synthase RG53_RS20950 PF01964 Radical SAM ThiC family RG53_RS20950 PF13667 ThiC-associated domain RG53_RS20955 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ RG53_RS20960 PF00293 NUDIX domain RG53_RS20960 PF09297 NADH pyrophosphatase zinc ribbon domain RG53_RS20965 PF01208 Uroporphyrinogen decarboxylase (URO-D) RG53_RS20970 PF04493 Endonuclease V RG53_RS20975 PF04222 Protein of unknown function (DUF416) RG53_RS20980 PF00216 Bacterial DNA-binding protein RG53_RS20985 PF07356 Protein of unknown function (DUF1481) RG53_RS20990 PF13801 Heavy-metal resistance RG53_RS21000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG53_RS21000 PF00512 His Kinase A (phospho-acceptor) domain RG53_RS21005 PF02954 Bacterial regulatory protein, Fis family RG53_RS21005 PF00072 Response regulator receiver domain RG53_RS21005 PF00158 Sigma-54 interaction domain RG53_RS21010 PF02844 Phosphoribosylglycinamide synthetase, N domain RG53_RS21010 PF02843 Phosphoribosylglycinamide synthetase, C domain RG53_RS21010 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RG53_RS21015 PF01808 AICARFT/IMPCHase bienzyme RG53_RS21015 PF02142 MGS-like domain RG53_RS21045 PF13673 Acetyltransferase (GNAT) domain RG53_RS21050 PF04204 Homoserine O-succinyltransferase RG53_RS21055 PF01274 Malate synthase RG53_RS21060 PF00463 Isocitrate lyase family RG53_RS21070 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) RG53_RS21075 PF07906 ShET2 enterotoxin, N-terminal region RG53_RS21080 PF07906 ShET2 enterotoxin, N-terminal region RG53_RS21085 PF01614 Bacterial transcriptional regulator RG53_RS21085 PF09339 IclR helix-turn-helix domain RG53_RS21090 PF02574 Homocysteine S-methyltransferase RG53_RS21090 PF00809 Pterin binding enzyme RG53_RS21090 PF02965 Vitamin B12 dependent methionine synthase, activation domain RG53_RS21090 PF02607 B12 binding domain RG53_RS21090 PF02310 B12 binding domain RG53_RS21095 PF02690 Na+/Pi-cotransporter RG53_RS21100 PF03575 Peptidase family S51 RG53_RS21105 PF01479 S4 domain RG53_RS21105 PF00849 RNA pseudouridylate synthase RG53_RS21110 PF11656 YjbD family (DUF3811) RG53_RS21120 PF10127 RNA repair pathway DNA polymerase beta family RG53_RS21125 PF06414 Zeta toxin RG53_RS21130 PF01842 ACT domain RG53_RS21130 PF00696 Amino acid kinase family RG53_RS21140 PF00342 Phosphoglucose isomerase RG53_RS21145 PF11106 Exopolysaccharide production protein YjbE RG53_RS21150 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF RG53_RS21155 PF06251 Capsule biosynthesis GfcC RG53_RS21160 PF06082 Exopolysaccharide biosynthesis protein YbjH RG53_RS21165 PF17089 Uncharacterised protein family RG53_RS21170 PF06146 Phosphate-starvation-inducible E RG53_RS21180 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS21185 PF14785 Maltose transport system permease protein MalF P2 domain RG53_RS21185 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS21190 PF01547 Bacterial extracellular solute-binding protein RG53_RS21200 PF00005 ABC transporter RG53_RS21200 PF17912 MalK OB fold domain RG53_RS21205 PF02264 LamB porin RG53_RS21210 PF07148 Maltose operon periplasmic protein precursor (MalM) RG53_RS21220 PF13599 Pentapeptide repeats (9 copies) RG53_RS21220 PF13981 SopA-like central domain RG53_RS21230 PF04345 Chorismate lyase RG53_RS21235 PF01040 UbiA prenyltransferase family RG53_RS21240 PF01553 Acyltransferase RG53_RS21245 PF01219 Prokaryotic diacylglycerol kinase RG53_RS21250 PF01726 LexA DNA binding domain RG53_RS21250 PF00717 Peptidase S24-like RG53_RS21255 PF01554 MatE RG53_RS21260 PF05532 CsbD-like RG53_RS21265 PF01475 Ferric uptake regulator family RG53_RS21275 PF10897 Protein of unknown function (DUF2713) RG53_RS21280 PF01207 Dihydrouridine synthase (Dus) RG53_RS21285 PF09583 Phage shock protein G (Phageshock_PspG) RG53_RS21290 PF00107 Zinc-binding dehydrogenase RG53_RS21290 PF08240 Alcohol dehydrogenase GroES-like domain RG53_RS21295 PF03796 DnaB-like helicase C terminal domain RG53_RS21295 PF00772 DnaB-like helicase N terminal domain RG53_RS21300 PF00842 Alanine racemase, C-terminal domain RG53_RS21300 PF01168 Alanine racemase, N-terminal domain RG53_RS21305 PF00155 Aminotransferase class I and II RG53_RS21315 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) RG53_RS21320 PF01894 Uncharacterised protein family UPF0047 RG53_RS21325 PF04237 YjbR RG53_RS21330 PF17760 UvrA interaction domain RG53_RS21330 PF17755 UvrA DNA-binding domain RG53_RS21330 PF00005 ABC transporter RG53_RS21335 PF00436 Single-strand binding protein family RG53_RS21340 PF15940 Family of unknown function RG53_RS21350 PF12792 CSS motif domain associated with EAL RG53_RS21350 PF00563 EAL domain RG53_RS21355 PF12833 Helix-turn-helix domain RG53_RS21360 PF00376 MerR family regulatory protein RG53_RS21360 PF09278 MerR, DNA binding RG53_RS21380 PF00860 Permease family RG53_RS21385 PF00999 Sodium/hydrogen exchanger family RG53_RS21390 PF00805 Pentapeptide repeats (8 copies) RG53_RS21395 PF00474 Sodium:solute symporter family RG53_RS21400 PF04341 Protein of unknown function, DUF485 RG53_RS21405 PF13193 AMP-binding enzyme C-terminal domain RG53_RS21405 PF16177 Acetyl-coenzyme A synthetase N-terminus RG53_RS21405 PF00501 AMP-binding enzyme RG53_RS21415 PF02335 Cytochrome c552 RG53_RS21420 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) RG53_RS21420 PF13435 Cytochrome c554 and c-prime RG53_RS21425 PF13247 4Fe-4S dicluster domain RG53_RS21425 PF00037 4Fe-4S binding domain RG53_RS21430 PF03916 Polysulphide reductase, NrfD RG53_RS21435 PF01578 Cytochrome C assembly protein RG53_RS21435 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal RG53_RS21440 PF03918 Cytochrome C biogenesis protein RG53_RS21455 PF00375 Sodium:dicarboxylate symporter family RG53_RS21460 PF08238 Sel1 repeat RG53_RS21470 PF02321 Outer membrane efflux protein RG53_RS21475 PF04632 Fusaric acid resistance protein family RG53_RS21480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RG53_RS21480 PF00529 HlyD membrane-fusion protein of T1SS RG53_RS21485 PF17090 Uncharacterised protein family RG53_RS21490 PF14864 Alkyl sulfatase C-terminal RG53_RS21490 PF14863 Alkyl sulfatase dimerisation RG53_RS21490 PF00753 Metallo-beta-lactamase superfamily RG53_RS21495 PF02502 Ribose/Galactose Isomerase RG53_RS21505 PF12706 Beta-lactamase superfamily domain RG53_RS21510 PF00583 Acetyltransferase (GNAT) family RG53_RS21520 PF07969 Amidohydrolase family RG53_RS21525 PF00005 ABC transporter RG53_RS21535 PF00005 ABC transporter RG53_RS21540 PF06007 Phosphonate metabolism protein PhnJ RG53_RS21545 PF05861 Bacterial phosphonate metabolism protein (PhnI) RG53_RS21550 PF05845 Bacterial phosphonate metabolism protein (PhnH) RG53_RS21555 PF06754 Phosphonate metabolism protein PhnG RG53_RS21560 PF00392 Bacterial regulatory proteins, gntR family RG53_RS21560 PF07702 UTRA domain RG53_RS21565 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS21575 PF00005 ABC transporter RG53_RS21580 PF06983 3-demethylubiquinone-9 3-methyltransferase RG53_RS21585 PF03831 PhnA domain RG53_RS21585 PF08274 PhnA Zinc-Ribbon RG53_RS21595 PF00350 Dynamin family RG53_RS21600 PF13990 YjcZ-like protein RG53_RS21605 PF00083 Sugar (and other) transporter RG53_RS21605 PF08946 Osmosensory transporter coiled coil RG53_RS21615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG53_RS21615 PF00512 His Kinase A (phospho-acceptor) domain RG53_RS21620 PF00072 Response regulator receiver domain RG53_RS21620 PF00486 Transcriptional regulatory protein, C terminal RG53_RS21625 PF08019 Phosphoethanolamine transferase EptA/EptB RG53_RS21625 PF00884 Sulfatase RG53_RS21630 PF13520 Amino acid permease RG53_RS21635 PF12833 Helix-turn-helix domain RG53_RS21640 PF01276 Orn/Lys/Arg decarboxylase, major domain RG53_RS21640 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain RG53_RS21640 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain RG53_RS21645 PF12833 Helix-turn-helix domain RG53_RS21655 PF02056 Family 4 glycosyl hydrolase RG53_RS21655 PF11975 Family 4 glycosyl hydrolase C-terminal domain RG53_RS21665 PF09997 Predicted membrane protein (DUF2238) RG53_RS21670 PF05683 Fumarase C-terminus RG53_RS21670 PF05681 Fumarate hydratase (Fumerase) RG53_RS21675 PF03605 Anaerobic c4-dicarboxylate membrane transporter RG53_RS21685 PF00072 Response regulator receiver domain RG53_RS21690 PF17203 Single cache domain 3 RG53_RS21690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG53_RS21690 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain RG53_RS21690 PF00989 PAS fold RG53_RS21695 PF06902 Divergent 4Fe-4S mono-cluster RG53_RS21700 PF14542 GCN5-related N-acetyl-transferase RG53_RS21710 PF11080 Endoribonuclease GhoS RG53_RS21715 PF10753 Toxin GhoT_OrtT RG53_RS21720 PF00152 tRNA synthetases class II (D, K and N) RG53_RS21720 PF01336 OB-fold nucleic acid binding domain RG53_RS21725 PF00854 POT family RG53_RS21730 PF01276 Orn/Lys/Arg decarboxylase, major domain RG53_RS21730 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain RG53_RS21730 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain RG53_RS21735 PF13520 Amino acid permease RG53_RS21740 PF00486 Transcriptional regulatory protein, C terminal RG53_RS21740 PF18500 CadC C-terminal domain 1 RG53_RS21760 PF02683 Cytochrome C biogenesis protein transmembrane region RG53_RS21760 PF11412 Disulphide bond corrector protein DsbC RG53_RS21765 PF03091 CutA1 divalent ion tolerance protein RG53_RS21770 PF03605 Anaerobic c4-dicarboxylate membrane transporter RG53_RS21775 PF00206 Lyase RG53_RS21775 PF10415 Fumarase C C-terminus RG53_RS21785 PF04186 FxsA cytoplasmic membrane protein RG53_RS21790 PF13520 Amino acid permease RG53_RS21795 PF00166 Chaperonin 10 Kd subunit RG53_RS21800 PF00118 TCP-1/cpn60 chaperonin family RG53_RS21805 PF13698 Domain of unknown function (DUF4156) RG53_RS21810 PF15922 YjeJ-like RG53_RS21815 PF04055 Radical SAM superfamily RG53_RS21820 PF09285 Elongation factor P, C-terminal RG53_RS21820 PF08207 Elongation factor P (EF-P) KOW-like domain RG53_RS21820 PF01132 Elongation factor P (EF-P) OB domain RG53_RS21825 PF08085 Entericidin EcnA/B family RG53_RS21830 PF08085 Entericidin EcnA/B family RG53_RS21835 PF00893 Small Multidrug Resistance protein RG53_RS21840 PF08212 Lipocalin-like domain RG53_RS21845 PF00144 Beta-lactamase RG53_RS21850 PF02313 Fumarate reductase subunit D RG53_RS21855 PF02300 Fumarate reductase subunit C RG53_RS21860 PF13085 2Fe-2S iron-sulfur cluster binding domain RG53_RS21860 PF13183 4Fe-4S dicluster domain RG53_RS21865 PF00890 FAD binding domain RG53_RS21865 PF02910 Fumarate reductase flavoprotein C-term RG53_RS21870 PF00152 tRNA synthetases class II (D, K and N) RG53_RS21875 PF13520 Amino acid permease RG53_RS21880 PF12794 Mechanosensitive ion channel inner membrane domain 1 RG53_RS21880 PF12795 Mechanosensitive ion channel porin domain RG53_RS21880 PF00924 Mechanosensitive ion channel RG53_RS21885 PF02666 Phosphatidylserine decarboxylase RG53_RS21890 PF03193 RsgA GTPase RG53_RS21895 PF00929 Exonuclease RG53_RS21915 PF08331 Domain of unknown function (DUF1730) RG53_RS21920 PF01256 Carbohydrate kinase RG53_RS21920 PF03853 YjeF-related protein N-terminus RG53_RS21925 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE RG53_RS21930 PF01520 N-acetylmuramoyl-L-alanine amidase RG53_RS21935 PF08676 MutL C terminal dimerisation domain RG53_RS21935 PF01119 DNA mismatch repair protein, C-terminal domain RG53_RS21945 PF17209 Hfq protein RG53_RS21950 PF13167 GTP-binding GTPase N-terminal RG53_RS21950 PF16360 GTP-binding GTPase Middle Region RG53_RS21950 PF01926 50S ribosome-binding GTPase RG53_RS21955 PF12221 Bacterial membrane protein N terminal RG53_RS21955 PF01145 SPFH domain / Band 7 family RG53_RS21960 PF01145 SPFH domain / Band 7 family RG53_RS21965 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) RG53_RS21970 PF00709 Adenylosuccinate synthetase RG53_RS21975 PF02082 Transcriptional regulator RG53_RS21980 PF17876 Cold shock domain RG53_RS21980 PF00575 S1 RNA binding domain RG53_RS21980 PF00773 RNB domain RG53_RS21980 PF08461 Ribonuclease R winged-helix domain RG53_RS21980 PF08206 Ribonuclease B OB domain RG53_RS21985 PF08032 RNA 2'-O ribose methyltransferase substrate binding RG53_RS21985 PF00588 SpoU rRNA Methylase family RG53_RS21990 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) RG53_RS21995 PF04012 PspA/IM30 family RG53_RS22000 PF10679 Protein of unknown function (DUF2491) RG53_RS22005 PF03994 Domain of Unknown Function (DUF350) RG53_RS22010 PF06693 Protein of unknown function (DUF1190) RG53_RS22015 PF03738 Glutathionylspermidine synthase preATP-grasp RG53_RS22020 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RG53_RS22020 PF18158 Adaptive response protein AidB N-terminal domain RG53_RS22020 PF02770 Acyl-CoA dehydrogenase, middle domain RG53_RS22025 PF07338 Protein of unknown function (DUF1471) RG53_RS22030 PF07338 Protein of unknown function (DUF1471) RG53_RS22035 PF00326 Prolyl oligopeptidase family RG53_RS22040 PF08220 DeoR-like helix-turn-helix domain RG53_RS22040 PF00455 DeoR C terminal sensor domain RG53_RS22050 PF03611 PTS system sugar-specific permease component RG53_RS22055 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RG53_RS22060 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RG53_RS22065 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RG53_RS22070 PF01261 Xylose isomerase-like TIM barrel RG53_RS22075 PF00596 Class II Aldolase and Adducin N-terminal domain RG53_RS22080 PF07274 Protein of unknown function (DUF1440) RG53_RS22085 PF07338 Protein of unknown function (DUF1471) RG53_RS22090 PF01250 Ribosomal protein S6 RG53_RS22095 PF00436 Single-strand binding protein family RG53_RS22100 PF01084 Ribosomal protein S18 RG53_RS22105 PF01281 Ribosomal protein L9, N-terminal domain RG53_RS22105 PF03948 Ribosomal protein L9, C-terminal domain RG53_RS22110 PF03480 Bacterial extracellular solute-binding protein, family 7 RG53_RS22115 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RG53_RS22120 PF13276 HTH-like domain RG53_RS22120 PF13333 Integrase core domain RG53_RS22120 PF00665 Integrase core domain RG53_RS22125 PF01527 Transposase RG53_RS22130 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component RG53_RS22135 PF00890 FAD binding domain RG53_RS22135 PF02910 Fumarate reductase flavoprotein C-term RG53_RS22140 PF01144 Coenzyme A transferase RG53_RS22145 PF00378 Enoyl-CoA hydratase/isomerase RG53_RS22160 PF17938 Tetracyclin repressor-like, C-terminal domain RG53_RS22165 PF08525 Opacity-associated protein A N-terminal motif RG53_RS22165 PF04225 Opacity-associated protein A LysM-like domain RG53_RS22175 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase RG53_RS22175 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RG53_RS22180 PF00324 Amino acid permease RG53_RS22185 PF01814 Hemerythrin HHE cation binding domain RG53_RS22185 PF04405 Domain of Unknown function (DUF542) RG53_RS22190 PF00892 EamA-like transporter family RG53_RS22195 PF05368 NmrA-like family RG53_RS22200 PF01638 HxlR-like helix-turn-helix RG53_RS22205 PF02872 5'-nucleotidase, C-terminal domain RG53_RS22205 PF00149 Calcineurin-like phosphoesterase RG53_RS22210 PF00459 Inositol monophosphatase family RG53_RS22215 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) RG53_RS22220 PF06526 Protein of unknown function (DUF1107) RG53_RS22225 PF00571 CBS domain RG53_RS22225 PF03471 Transporter associated domain RG53_RS22225 PF01595 Cyclin M transmembrane N-terminal domain RG53_RS22230 PF01625 Peptide methionine sulfoxide reductase RG53_RS22240 PF17243 POTRA domain TamA domain 1 RG53_RS22240 PF07244 Surface antigen variable number repeat RG53_RS22240 PF01103 Surface antigen RG53_RS22245 PF04357 TamB, inner membrane protein subunit of TAM complex RG53_RS22250 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like RG53_RS22255 PF00719 Inorganic pyrophosphatase RG53_RS22260 PF13407 Periplasmic binding protein domain RG53_RS22270 PF00005 ABC transporter RG53_RS22275 PF02653 Branched-chain amino acid transport system / permease component RG53_RS22280 PF02653 Branched-chain amino acid transport system / permease component RG53_RS22285 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain RG53_RS22290 PF02875 Mur ligase family, glutamate ligase domain RG53_RS22290 PF01225 Mur ligase family, catalytic domain RG53_RS22290 PF08245 Mur ligase middle domain RG53_RS22295 PF04751 Protein of unknown function (DUF615) RG53_RS22300 PF01523 Putative modulator of DNA gyrase RG53_RS22305 PF07361 Cytochrome b562 RG53_RS22320 PF03477 ATP cone domain RG53_RS22320 PF13597 Anaerobic ribonucleoside-triphosphate reductase RG53_RS22325 PF11941 Domain of unknown function (DUF3459) RG53_RS22325 PF00128 Alpha amylase, catalytic domain RG53_RS22330 PF02378 Phosphotransferase system, EIIC RG53_RS22330 PF00367 phosphotransferase system, EIIB RG53_RS22335 PF00356 Bacterial regulatory proteins, lacI family RG53_RS22340 PF00690 Cation transporter/ATPase, N-terminus RG53_RS22340 PF00689 Cation transporting ATPase, C-terminus RG53_RS22345 PF02371 Transposase IS116/IS110/IS902 family RG53_RS22345 PF01548 Transposase RG53_RS22350 PF01042 Endoribonuclease L-PSP RG53_RS22355 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain RG53_RS22355 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain RG53_RS22360 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RG53_RS22360 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RG53_RS22365 PF08052 PyrBI operon leader peptide RG53_RS22375 PF01042 Endoribonuclease L-PSP RG53_RS22385 PF00440 Bacterial regulatory proteins, tetR family RG53_RS22390 PF04074 YhcH/YjgK/YiaL RG53_RS22410 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RG53_RS22410 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RG53_RS22415 PF06877 Regulator of ribonuclease activity B RG53_RS22420 PF00583 Acetyltransferase (GNAT) family RG53_RS22425 PF05987 Bacterial protein of unknown function (DUF898) RG53_RS22430 PF10458 Valyl tRNA synthetase tRNA binding arm RG53_RS22430 PF08264 Anticodon-binding domain of tRNA RG53_RS22430 PF00133 tRNA synthetases class I (I, L, M and V) RG53_RS22435 PF04364 DNA polymerase III chi subunit, HolC RG53_RS22440 PF02789 Cytosol aminopeptidase family, N-terminal domain RG53_RS22440 PF00883 Cytosol aminopeptidase family, catalytic domain RG53_RS22445 PF03739 Lipopolysaccharide export system permease LptF/LptG RG53_RS22450 PF03739 Lipopolysaccharide export system permease LptF/LptG RG53_RS22455 PF05872 Bacterial protein of unknown function (DUF853) RG53_RS22460 PF00107 Zinc-binding dehydrogenase RG53_RS22460 PF08240 Alcohol dehydrogenase GroES-like domain RG53_RS22475 PF03793 PASTA domain RG53_RS22475 PF00069 Protein kinase domain RG53_RS22530 PF12102 Domain of unknown function (DUF3578) RG53_RS22530 PF07728 AAA domain (dynein-related subfamily) RG53_RS22545 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase RG53_RS22555 PF06178 Oligogalacturonate-specific porin protein (KdgM) RG53_RS22560 PF05598 Transposase domain (DUF772) RG53_RS22560 PF01609 Transposase DDE domain RG53_RS22570 PF00589 Phage integrase family RG53_RS22575 PF00589 Phage integrase family RG53_RS22585 PF00419 Fimbrial protein RG53_RS22590 PF00419 Fimbrial protein RG53_RS22595 PF02753 Pili assembly chaperone PapD, C-terminal domain RG53_RS22595 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RG53_RS22600 PF00577 Outer membrane usher protein RG53_RS22600 PF13953 PapC C-terminal domain RG53_RS22600 PF13954 PapC N-terminal domain RG53_RS22605 PF00419 Fimbrial protein RG53_RS22615 PF00419 Fimbrial protein RG53_RS22615 PF09160 FimH, mannose binding RG53_RS22620 PF02447 GntP family permease RG53_RS22630 PF03786 D-mannonate dehydratase (UxuA) RG53_RS22635 PF08125 Mannitol dehydrogenase C-terminal domain RG53_RS22635 PF01232 Mannitol dehydrogenase Rossmann domain RG53_RS22645 PF00392 Bacterial regulatory proteins, gntR family RG53_RS22645 PF07729 FCD domain RG53_RS22650 PF10887 Protein of unknown function (DUF2686) RG53_RS22660 PF04965 Gene 25-like lysozyme RG53_RS22665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG53_RS22665 PF03466 LysR substrate binding domain RG53_RS22670 PF01979 Amidohydrolase family RG53_RS22675 PF07670 Nucleoside recognition RG53_RS22680 PF07670 Nucleoside recognition RG53_RS22690 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family RG53_RS22695 PF06779 Uncharacterised MFS-type transporter YbfB RG53_RS22700 PF06977 SdiA-regulated RG53_RS22705 PF11823 Protein of unknown function (DUF3343) RG53_RS22710 PF01869 BadF/BadG/BcrA/BcrD ATPase family RG53_RS22715 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component RG53_RS22720 PF04286 Protein of unknown function (DUF445) RG53_RS22725 PF07690 Major Facilitator Superfamily RG53_RS22735 PF04754 Putative transposase, YhgA-like RG53_RS22740 PF00155 Aminotransferase class I and II RG53_RS22740 PF00392 Bacterial regulatory proteins, gntR family RG53_RS22745 PF06568 Domain of unknown function (DUF1127) RG53_RS22755 PF02492 CobW/HypB/UreG, nucleotide-binding domain RG53_RS22755 PF07683 Cobalamin synthesis protein cobW C-terminal domain RG53_RS22760 PF04328 Selenoprotein, putative RG53_RS22765 PF02554 Carbon starvation protein CstA RG53_RS22765 PF13722 5TM C-terminal transporter carbon starvation CstA RG53_RS22770 PF01613 Flavin reductase like domain RG53_RS22775 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal RG53_RS22775 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal RG53_RS22785 PF07690 Major Facilitator Superfamily RG53_RS22790 PF03328 HpcH/HpaI aldolase/citrate lyase family RG53_RS22795 PF01557 Fumarylacetoacetate (FAA) hydrolase family RG53_RS22800 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase RG53_RS22805 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase RG53_RS22810 PF00171 Aldehyde dehydrogenase family RG53_RS22815 PF01557 Fumarylacetoacetate (FAA) hydrolase family RG53_RS22820 PF01047 MarR family RG53_RS22825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RG53_RS22825 PF00672 HAMP domain RG53_RS22825 PF02203 Tar ligand binding domain homologue RG53_RS22830 PF07690 Major Facilitator Superfamily RG53_RS22835 PF00392 Bacterial regulatory proteins, gntR family RG53_RS22835 PF07729 FCD domain RG53_RS22840 PF00107 Zinc-binding dehydrogenase RG53_RS22840 PF08240 Alcohol dehydrogenase GroES-like domain RG53_RS22845 PF00884 Sulfatase RG53_RS22850 PF10696 Protein of unknown function (DUF2501) RG53_RS22855 PF01695 IstB-like ATP binding protein RG53_RS22860 PF17948 DnaT DNA-binding domain RG53_RS22865 PF12821 Threonine/Serine exporter, ThrE RG53_RS22870 PF06738 Putative threonine/serine exporter RG53_RS22875 PF00196 Bacterial regulatory proteins, luxR family RG53_RS22880 PF00196 Bacterial regulatory proteins, luxR family RG53_RS22885 PF11575 FhuF 2Fe-2S C-terminal domain RG53_RS22885 PF06276 Ferric iron reductase FhuF-like transporter RG53_RS22890 PF07256 Protein of unknown function (DUF1435) RG53_RS22915 PF05175 Methyltransferase small domain RG53_RS22915 PF08468 Methyltransferase small domain N-terminal RG53_RS22920 PF03603 DNA polymerase III psi subunit RG53_RS22925 PF00583 Acetyltransferase (GNAT) family RG53_RS22930 PF13419 Haloacid dehalogenase-like hydrolase RG53_RS22935 PF00009 Elongation factor Tu GTP binding domain RG53_RS22935 PF03144 Elongation factor Tu domain 2 RG53_RS22935 PF16658 Class II release factor RF3, C-terminal domain RG53_RS22940 PF04972 BON domain RG53_RS22945 PF07043 Protein of unknown function (DUF1328) RG53_RS22950 PF01734 Patatin-like phospholipase RG53_RS22955 PF01026 TatD related DNase RG53_RS22960 PF04055 Radical SAM superfamily RG53_RS22965 PF11230 Protein of unknown function (DUF3029) RG53_RS22975 PF01791 DeoC/LacD family aldolase RG53_RS22980 PF00591 Glycosyl transferase family, a/b domain RG53_RS22980 PF02885 Glycosyl transferase family, helical bundle domain RG53_RS22980 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain RG53_RS22985 PF01676 Metalloenzyme superfamily RG53_RS22990 PF01048 Phosphorylase superfamily RG53_RS23005 PF18429 Domain of unknown function (DUF5609) RG53_RS23010 PF18073 Rubredoxin metal binding domain RG53_RS23015 PF01381 Helix-turn-helix RG53_RS23015 PF13521 AAA domain RG53_RS23025 PF12848 ABC transporter RG53_RS23025 PF00005 ABC transporter RG53_RS23035 PF14718 Soluble lytic murein transglycosylase L domain RG53_RS23035 PF01464 Transglycosylase SLT domain RG53_RS23040 PF01371 Trp repressor protein RG53_RS23045 PF01931 Protein of unknown function DUF84 RG53_RS23050 PF00300 Histidine phosphatase superfamily (branch 1) RG53_RS23055 PF12833 Helix-turn-helix domain RG53_RS23055 PF06445 GyrI-like small molecule binding domain RG53_RS23060 PF05981 CreA protein RG53_RS23065 PF00486 Transcriptional regulatory protein, C terminal RG53_RS23065 PF00072 Response regulator receiver domain RG53_RS23070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG53_RS23070 PF00512 His Kinase A (phospho-acceptor) domain RG53_RS23070 PF00672 HAMP domain RG53_RS23075 PF06123 Inner membrane protein CreD RG53_RS23080 PF00486 Transcriptional regulatory protein, C terminal RG53_RS23080 PF00072 Response regulator receiver domain RG53_RS23090 PF00588 SpoU rRNA Methylase family RG53_RS23095 PF08254 Threonine leader peptide RG53_RS23100 PF03447 Homoserine dehydrogenase, NAD binding domain RG53_RS23100 PF00742 Homoserine dehydrogenase RG53_RS23100 PF13840 ACT domain RG53_RS23100 PF00696 Amino acid kinase family RG53_RS23100 PF01842 ACT domain RG53_RS23105 PF00288 GHMP kinases N terminal domain RG53_RS23105 PF08544 GHMP kinases C terminal RG53_RS23110 PF00291 Pyridoxal-phosphate dependent enzyme RG53_RS23110 PF14821 Threonine synthase N terminus RG53_RS23120 PF10697 Protein of unknown function (DUF2502) RG53_RS23125 PF02371 Transposase IS116/IS110/IS902 family RG53_RS23125 PF01548 Transposase RG53_RS23130 PF03883 Peroxide stress protein YaaA RG53_RS23135 PF01235 Sodium:alanine symporter family RG53_RS23140 PF00923 Transaldolase/Fructose-6-phosphate aldolase RG53_RS23145 PF00994 Probable molybdopterin binding domain RG53_RS23150 PF01184 GPR1/FUN34/yaaH family RG53_RS23155 PF03981 Ubiquinol-cytochrome C chaperone RG53_RS23155 PF13099 Domain of unknown function (DUF3944) RG53_RS23160 PF10807 Protein of unknown function (DUF2541) RG53_RS23165 PF00012 Hsp70 protein RG53_RS23170 PF00684 DnaJ central domain RG53_RS23170 PF01556 DnaJ C terminal domain RG53_RS23170 PF00226 DnaJ domain RG53_RS23175 PF01848 Hok/gef family RG53_RS23180 PF06965 Na+/H+ antiporter 1 RG53_RS23185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG53_RS23185 PF03466 LysR substrate binding domain RG53_RS23210 PF01649 Ribosomal protein S20 RG53_RS23215 PF10837 Protein of unknown function (DUF2575) RG53_RS23220 PF01687 Riboflavin kinase RG53_RS23220 PF06574 FAD synthetase RG53_RS23225 PF08264 Anticodon-binding domain of tRNA RG53_RS23225 PF00133 tRNA synthetases class I (I, L, M and V) RG53_RS23225 PF06827 Zinc finger found in FPG and IleRS RG53_RS23230 PF01252 Signal peptidase (SPase) II RG53_RS23235 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RG53_RS23240 PF02401 LytB protein RG53_RS23245 PF01156 Inosine-uridine preferring nucleoside hydrolase RG53_RS23250 PF01113 Dihydrodipicolinate reductase, N-terminus RG53_RS23250 PF05173 Dihydrodipicolinate reductase, C-terminus RG53_RS23255 PF00117 Glutamine amidotransferase class-I RG53_RS23255 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain RG53_RS23260 PF02142 MGS-like domain RG53_RS23260 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RG53_RS23260 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RG53_RS23270 PF07180 CaiF/GrlA transcriptional regulator RG53_RS23275 PF00132 Bacterial transferase hexapeptide (six repeats) RG53_RS23280 PF00378 Enoyl-CoA hydratase/isomerase RG53_RS23285 PF13193 AMP-binding enzyme C-terminal domain RG53_RS23285 PF00501 AMP-binding enzyme RG53_RS23290 PF02515 CoA-transferase family III RG53_RS23295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RG53_RS23295 PF02770 Acyl-CoA dehydrogenase, middle domain RG53_RS23295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RG53_RS23300 PF02028 BCCT, betaine/carnitine/choline family transporter RG53_RS23305 PF01012 Electron transfer flavoprotein domain RG53_RS23310 PF00766 Electron transfer flavoprotein FAD-binding domain RG53_RS23310 PF01012 Electron transfer flavoprotein domain RG53_RS23315 PF01494 FAD binding domain RG53_RS23325 PF00083 Sugar (and other) transporter RG53_RS23330 PF02525 Flavodoxin-like fold RG53_RS23335 PF00999 Sodium/hydrogen exchanger family RG53_RS23335 PF02254 TrkA-N domain RG53_RS23340 PF00186 Dihydrofolate reductase RG53_RS23345 PF00149 Calcineurin-like phosphoesterase RG53_RS23350 PF04379 ApaG domain RG53_RS23355 PF00398 Ribosomal RNA adenine dimethylase RG53_RS23360 PF04166 Pyridoxal phosphate biosynthetic protein PdxA RG53_RS23365 PF00639 PPIC-type PPIASE domain RG53_RS23365 PF09312 SurA N-terminal domain RG53_RS23370 PF04453 LPS transport system D RG53_RS23370 PF03968 OstA-like protein RG53_RS23375 PF05099 Tellurite resistance protein TerB RG53_RS23375 PF00226 DnaJ domain RG53_RS23380 PF00849 RNA pseudouridylate synthase RG53_RS23385 PF00271 Helicase conserved C-terminal domain RG53_RS23385 PF18337 RapA N-terminal Tudor like domain RG53_RS23385 PF00176 SNF2 family N-terminal domain RG53_RS23385 PF12137 RNA polymerase recycling family C-terminal RG53_RS23385 PF18339 RapA N-terminal Tudor like domain 1 RG53_RS23390 PF03104 DNA polymerase family B, exonuclease domain RG53_RS23390 PF00136 DNA polymerase family B RG53_RS23395 PF00596 Class II Aldolase and Adducin N-terminal domain RG53_RS23400 PF02610 L-arabinose isomerase RG53_RS23400 PF11762 L-arabinose isomerase C-terminal domain RG53_RS23405 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RG53_RS23415 PF02311 AraC-like ligand binding domain RG53_RS23415 PF12833 Helix-turn-helix domain RG53_RS23420 PF09335 SNARE associated Golgi protein RG53_RS23425 PF00005 ABC transporter RG53_RS23430 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS23440 PF12793 Sugar transport-related sRNA regulator N-term RG53_RS23440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RG53_RS23450 PF07690 Major Facilitator Superfamily RG53_RS23455 PF00694 Aconitase C-terminal domain RG53_RS23460 PF00330 Aconitase family (aconitate hydratase) RG53_RS23465 PF00180 Isocitrate/isopropylmalate dehydrogenase RG53_RS23470 PF08502 LeuA allosteric (dimerisation) domain RG53_RS23470 PF00682 HMGL-like RG53_RS23475 PF08054 Leucine operon leader peptide RG53_RS23480 PF03466 LysR substrate binding domain RG53_RS23480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG53_RS23485 PF00205 Thiamine pyrophosphate enzyme, central domain RG53_RS23485 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RG53_RS23485 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RG53_RS23490 PF10369 Small subunit of acetolactate synthase RG53_RS23500 PF00356 Bacterial regulatory proteins, lacI family RG53_RS23500 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RG53_RS23510 PF02381 MraZ protein, putative antitoxin-like RG53_RS23515 PF01795 MraW methylase family RG53_RS23520 PF04999 Cell division protein FtsL RG53_RS23525 PF00905 Penicillin binding protein transpeptidase domain RG53_RS23525 PF03717 Penicillin-binding Protein dimerisation domain RG53_RS23530 PF08245 Mur ligase middle domain RG53_RS23530 PF01225 Mur ligase family, catalytic domain RG53_RS23530 PF02875 Mur ligase family, glutamate ligase domain RG53_RS23535 PF08245 Mur ligase middle domain RG53_RS23535 PF02875 Mur ligase family, glutamate ligase domain RG53_RS23535 PF01225 Mur ligase family, catalytic domain RG53_RS23540 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 RG53_RS23540 PF00953 Glycosyl transferase family 4 RG53_RS23545 PF08245 Mur ligase middle domain RG53_RS23545 PF02875 Mur ligase family, glutamate ligase domain RG53_RS23550 PF01098 Cell cycle protein RG53_RS23555 PF03033 Glycosyltransferase family 28 N-terminal domain RG53_RS23555 PF04101 Glycosyltransferase family 28 C-terminal domain RG53_RS23560 PF08245 Mur ligase middle domain RG53_RS23560 PF02875 Mur ligase family, glutamate ligase domain RG53_RS23560 PF01225 Mur ligase family, catalytic domain RG53_RS23565 PF01820 D-ala D-ala ligase N-terminus RG53_RS23565 PF07478 D-ala D-ala ligase C-terminus RG53_RS23570 PF03799 Cell division protein FtsQ RG53_RS23570 PF08478 POTRA domain, FtsQ-type RG53_RS23575 PF02491 SHS2 domain inserted in FTSA RG53_RS23580 PF12327 FtsZ family, C-terminal domain RG53_RS23580 PF00091 Tubulin/FtsZ family, GTPase domain RG53_RS23585 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase RG53_RS23590 PF06558 Secretion monitor precursor protein (SecM) RG53_RS23595 PF07517 SecA DEAD-like domain RG53_RS23595 PF01043 SecA preprotein cross-linking domain RG53_RS23595 PF02810 SEC-C motif RG53_RS23595 PF07516 SecA Wing and Scaffold domain RG53_RS23600 PF00293 NUDIX domain RG53_RS23605 PF03884 DNA gyrase inhibitor YacG RG53_RS23610 PF07072 Cell division protein RG53_RS23615 PF01121 Dephospho-CoA kinase RG53_RS23620 PF00478 IMP dehydrogenase / GMP reductase domain RG53_RS23625 PF00482 Type II secretion system (T2SS), protein F RG53_RS23630 PF00437 Type II/IV secretion system protein RG53_RS23630 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain RG53_RS23635 PF07963 Prokaryotic N-terminal methylation motif RG53_RS23645 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain RG53_RS23645 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain RG53_RS23650 PF01510 N-acetylmuramoyl-L-alanine amidase RG53_RS23655 PF17113 Regulatory signalling modulator protein AmpE RG53_RS23660 PF00324 Amino acid permease RG53_RS23665 PF07729 FCD domain RG53_RS23665 PF00392 Bacterial regulatory proteins, gntR family RG53_RS23675 PF00456 Transketolase, thiamine diphosphate binding domain RG53_RS23675 PF17831 Pyruvate dehydrogenase E1 component middle domain RG53_RS23680 PF00364 Biotin-requiring enzyme RG53_RS23680 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RG53_RS23680 PF02817 e3 binding domain RG53_RS23685 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG53_RS23685 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RG53_RS23690 PF11737 Protein of unknown function (DUF3300) RG53_RS23700 PF00330 Aconitase family (aconitate hydratase) RG53_RS23700 PF11791 Aconitate B N-terminal domain RG53_RS23700 PF06434 Aconitate hydratase 2 N-terminus RG53_RS23705 PF06062 Uncharacterised protein family (UPF0231) RG53_RS23710 PF02675 S-adenosylmethionine decarboxylase RG53_RS23715 PF17284 Spermidine synthase tetramerisation domain RG53_RS23720 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) RG53_RS23725 PF00394 Multicopper oxidase RG53_RS23725 PF07731 Multicopper oxidase RG53_RS23725 PF07732 Multicopper oxidase RG53_RS23730 PF01011 PQQ enzyme repeat RG53_RS23735 PF00156 Phosphoribosyl transferase domain RG53_RS23740 PF00484 Carbonic anhydrase RG53_RS23745 PF00005 ABC transporter RG53_RS23750 PF01061 ABC-2 type transporter RG53_RS23755 PF03610 PTS system fructose IIA component RG53_RS23760 PF01522 Polysaccharide deacetylase RG53_RS23765 PF02261 Aspartate decarboxylase RG53_RS23775 PF04754 Putative transposase, YhgA-like RG53_RS23780 PF02569 Pantoate-beta-alanine ligase RG53_RS23785 PF02548 Ketopantoate hydroxymethyltransferase RG53_RS23790 PF00419 Fimbrial protein RG53_RS23795 PF00419 Fimbrial protein RG53_RS23800 PF00419 Fimbrial protein RG53_RS23805 PF00419 Fimbrial protein RG53_RS23810 PF00577 Outer membrane usher protein RG53_RS23810 PF13954 PapC N-terminal domain RG53_RS23810 PF13953 PapC C-terminal domain RG53_RS23815 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RG53_RS23815 PF02753 Pili assembly chaperone PapD, C-terminal domain RG53_RS23820 PF00419 Fimbrial protein RG53_RS23825 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) RG53_RS23830 PF12627 Probable RNA and SrmB- binding site of polymerase A RG53_RS23830 PF01743 Poly A polymerase head domain RG53_RS23830 PF12626 Polymerase A arginine-rich C-terminus RG53_RS23835 PF00749 tRNA synthetases class I (E and Q), catalytic domain RG53_RS23840 PF01258 Prokaryotic dksA/traR C4-type zinc finger RG53_RS23845 PF17746 SfsA N-terminal OB domain RG53_RS23845 PF03749 Sugar fermentation stimulation protein RE domain RG53_RS23850 PF02834 LigT like Phosphoesterase RG53_RS23855 PF00270 DEAD/DEAH box helicase RG53_RS23855 PF08482 ATP-dependent helicase C-terminal RG53_RS23855 PF04408 Helicase associated domain (HA2) RG53_RS23855 PF00271 Helicase conserved C-terminal domain RG53_RS23865 PF00905 Penicillin binding protein transpeptidase domain RG53_RS23865 PF14814 Bifunctional transglycosylase second domain RG53_RS23865 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal RG53_RS23865 PF00912 Transglycosylase RG53_RS23870 PF07715 TonB-dependent Receptor Plug Domain RG53_RS23870 PF00593 TonB dependent receptor RG53_RS23875 PF00005 ABC transporter RG53_RS23880 PF01497 Periplasmic binding protein RG53_RS23885 PF01032 FecCD transport family RG53_RS23890 PF00202 Aminotransferase class-III RG53_RS23895 PF00654 Voltage gated chloride channel RG53_RS23900 PF01521 Iron-sulphur cluster biosynthesis RG53_RS23905 PF03458 UPF0126 domain RG53_RS23910 PF01497 Periplasmic binding protein RG53_RS23915 PF01048 Phosphorylase superfamily RG53_RS23920 PF01966 HD domain RG53_RS23920 PF13286 Phosphohydrolase-associated domain RG53_RS23930 PF00595 PDZ domain RG53_RS23935 PF13556 PucR C-terminal helix-turn-helix domain RG53_RS23935 PF17853 GGDEF-like domain RG53_RS23935 PF05651 Putative sugar diacid recognition RG53_RS23940 PF11944 Protein of unknown function (DUF3461) RG53_RS23945 PF00132 Bacterial transferase hexapeptide (six repeats) RG53_RS23945 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal RG53_RS23945 PF14602 Hexapeptide repeat of succinyl-transferase RG53_RS23950 PF01909 Nucleotidyltransferase domain RG53_RS23950 PF01842 ACT domain RG53_RS23950 PF01966 HD domain RG53_RS23950 PF08335 GlnD PII-uridylyltransferase RG53_RS23955 PF00557 Metallopeptidase family M24 RG53_RS23965 PF00318 Ribosomal protein S2 RG53_RS23975 PF00889 Elongation factor TS RG53_RS23980 PF00696 Amino acid kinase family RG53_RS23985 PF01765 Ribosome recycling factor RG53_RS23990 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase RG53_RS23990 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain RG53_RS23990 PF13288 DXP reductoisomerase C-terminal domain RG53_RS23995 PF01255 Putative undecaprenyl diphosphate synthase RG53_RS24005 PF02163 Peptidase family M50 RG53_RS24005 PF17820 PDZ domain RG53_RS24010 PF01103 Surface antigen RG53_RS24010 PF07244 Surface antigen variable number repeat RG53_RS24015 PF03938 Outer membrane protein (OmpH-like) RG53_RS24020 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD RG53_RS24020 PF00132 Bacterial transferase hexapeptide (six repeats) RG53_RS24025 PF07977 FabA-like domain RG53_RS24030 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 RG53_RS24030 PF00132 Bacterial transferase hexapeptide (six repeats) RG53_RS24035 PF02684 Lipid-A-disaccharide synthetase RG53_RS24040 PF01351 Ribonuclease HII RG53_RS24045 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RG53_RS24045 PF14579 Helix-hairpin-helix motif RG53_RS24045 PF07733 Bacterial DNA polymerase III alpha NTPase domain RG53_RS24045 PF01336 OB-fold nucleic acid binding domain RG53_RS24045 PF02811 PHP domain RG53_RS24050 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit RG53_RS24055 PF01276 Orn/Lys/Arg decarboxylase, major domain RG53_RS24055 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain RG53_RS24055 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain RG53_RS24060 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RG53_RS24065 PF11734 TilS substrate C-terminal domain RG53_RS24065 PF01171 PP-loop family RG53_RS24065 PF09179 TilS substrate binding domain RG53_RS24070 PF07073 Modulator of Rho-dependent transcription termination (ROF) RG53_RS24075 PF06786 Uncharacterised protein family (UPF0253) RG53_RS24080 PF07152 YaeQ protein RG53_RS24085 PF00472 RF-1 domain RG53_RS24090 PF17185 NlpE C-terminal OB domain RG53_RS24090 PF04170 NlpE N-terminal domain RG53_RS24100 PF04073 Aminoacyl-tRNA editing domain RG53_RS24100 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RG53_RS24100 PF03129 Anticodon binding domain RG53_RS24105 PF01980 tRNA-methyltransferase O RG53_RS24105 PF18389 TrmO C-terminal domain RG53_RS24110 PF16358 RcsF lipoprotein RG53_RS24115 PF03180 NLPA lipoprotein RG53_RS24120 PF00528 Binding-protein-dependent transport system inner membrane component RG53_RS24125 PF00005 ABC transporter RG53_RS24125 PF09383 NIL domain RG53_RS24160 PF00248 Aldo/keto reductase family RG53_RS24165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG53_RS24165 PF03466 LysR substrate binding domain RG53_RS24170 PF03372 Endonuclease/Exonuclease/phosphatase family RG53_RS24175 PF08241 Methyltransferase domain RG53_RS24180 PF01476 LysM domain RG53_RS24180 PF01464 Transglycosylase SLT domain RG53_RS24185 PF16123 Hydroxyacylglutathione hydrolase C-terminus RG53_RS24185 PF00753 Metallo-beta-lactamase superfamily RG53_RS24190 PF08241 Methyltransferase domain RG53_RS24195 PF00075 RNase H RG53_RS24200 PF00929 Exonuclease RG53_RS24230 PF05638 Type VI secretion system effector, Hcp RG53_RS24240 PF06744 Type VI secretion protein IcmF C-terminal RG53_RS24240 PF06761 Intracellular multiplication and human macrophage-killing RG53_RS24240 PF14331 ImcF-related N-terminal domain RG53_RS24255 PF00004 ATPase family associated with various cellular activities (AAA) RG53_RS24255 PF10431 C-terminal, D2-small domain, of ClpB protein RG53_RS24255 PF07724 AAA domain (Cdc48 subfamily) RG53_RS24255 PF17871 AAA lid domain RG53_RS24265 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE RG53_RS24285 PF05947 Type VI secretion system, TssF RG53_RS24295 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath RG53_RS24315 PF05638 Type VI secretion system effector, Hcp RG53_RS24325 PF04717 Type VI secretion system, phage-baseplate injector RG53_RS24330 PF03527 RHS protein RG53_RS24330 PF14220 Domain of unknown function (DUF4329) RG53_RS24330 PF05593 RHS Repeat RG53_RS24375 PF03734 L,D-transpeptidase catalytic domain RG53_RS24445 PF07687 Peptidase dimerisation domain RG53_RS24445 PF01546 Peptidase family M20/M25/M40 RG53_RS24540 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RG53_RS24540 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RG53_RS24605 PF18649 EcpB C-terminal domain RG53_RS24655 PF02369 Bacterial Ig-like domain (group 1) RG53_RS24655 PF09134 Invasin, domain 3 RG53_RS24655 PF11924 Inverse autotransporter, beta-domain RG53_RS24690 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG53_RS24690 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RG53_RS24720 PF02589 LUD domain RG53_RS24745 PF03212 Pertactin RG53_RS24745 PF03797 Autotransporter beta-domain RG53_RS24790 PF00171 Aldehyde dehydrogenase family RG53_RS24860 PF00563 EAL domain RG53_RS24860 PF00196 Bacterial regulatory proteins, luxR family RG53_RS24875 PF00549 CoA-ligase RG53_RS24875 PF02629 CoA binding domain RG53_RS24880 PF00549 CoA-ligase RG53_RS24880 PF02629 CoA binding domain RG53_RS25005 PF13193 AMP-binding enzyme C-terminal domain RG53_RS25005 PF00501 AMP-binding enzyme RG53_RS25005 PF16177 Acetyl-coenzyme A synthetase N-terminus RG53_RS25055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG53_RS25055 PF03466 LysR substrate binding domain