RG53_RS00125	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
RG53_RS00150	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
RG53_RS00155	SM01092	CO dehydrogenase flavoprotein C-terminal domain
RG53_RS00210	SM00421	helix_turn_helix, Lux Regulon
RG53_RS00245	SM00634	Bacterial Ig-like domain (group 1)
RG53_RS00250	SM00342	helix_turn_helix, arabinose operon control protein
RG53_RS00250	SM00871	Bacterial transcription activator, effector binding domain
RG53_RS00275	SM00342	helix_turn_helix, arabinose operon control protein
RG53_RS00310	SM00869	Autotransporter beta-domain
RG53_RS00320	SM00421	helix_turn_helix, Lux Regulon
RG53_RS00360	SM00869	Autotransporter beta-domain
RG53_RS00365	SM00052	Putative diguanylate phosphodiesterase
RG53_RS00365	SM00421	helix_turn_helix, Lux Regulon
RG53_RS00385	SM00248	ankyrin repeats
RG53_RS00415	SM01022	RG53_RS00415
RG53_RS00425	SM00382	ATPases associated with a variety of cellular activities
RG53_RS00440	SM00829	Enoylreductase
RG53_RS00465	SM00382	ATPases associated with a variety of cellular activities
RG53_RS00515	SM00947	Carbonic anhydrase
RG53_RS00520	SM01116	RG53_RS00520
RG53_RS00530	SM01266	RG53_RS00530
RG53_RS00540	SM01038	Beta galactosidase small chain
RG53_RS00550	SM00354	helix_turn _helix lactose operon repressor
RG53_RS00555	SM00346	helix_turn_helix isocitrate lyase regulation
RG53_RS00580	SM00859	Semialdehyde dehydrogenase, NAD binding domain
RG53_RS00605	SM00829	Enoylreductase
RG53_RS00640	SM00062	Bacterial periplasmic substrate-binding proteins
RG53_RS00645	SM00382	ATPases associated with a variety of cellular activities
RG53_RS00660	SM01004	Delta-aminolevulinic acid dehydratase
RG53_RS00670	SM00869	Autotransporter beta-domain
RG53_RS00725	SM00098	Alkaline phosphatase homologues
RG53_RS00735	SM00267	diguanylate cyclase
RG53_RS00810	SM00448	cheY-homologous receiver domain
RG53_RS00810	SM00862	Transcriptional regulatory protein, C terminal
RG53_RS00815	SM00091	PAS domain
RG53_RS00815	SM00387	Histidine kinase-like ATPases
RG53_RS00815	SM00388	His Kinase A (phosphoacceptor) domain
RG53_RS00830	SM00642	Alpha-amylase domain
RG53_RS00850	SM01323	RG53_RS00850
RG53_RS00865	SM00507	HNH nucleases
RG53_RS00915	SM00861	Transketolase, pyrimidine binding domain
RG53_RS00930	SM00981	RG53_RS00930
RG53_RS00955	SM00671	Sel1-like repeats.
RG53_RS01025	SM00382	ATPases associated with a variety of cellular activities
RG53_RS01025	SM00994	ClpX C4-type zinc finger
RG53_RS01025	SM01086	C-terminal, D2-small domain, of ClpB protein
RG53_RS01030	SM00382	ATPases associated with a variety of cellular activities
RG53_RS01030	SM00464	Found in ATP-dependent protease La (LON)
RG53_RS01035	SM00411	bacterial (prokaryotic) histone like domain
RG53_RS01045	SM00278	Helix-hairpin-helix DNA-binding motif class 1
RG53_RS01070	SM00344	helix_turn_helix ASNC type
RG53_RS01075	SM00382	ATPases associated with a variety of cellular activities
RG53_RS01080	SM00382	ATPases associated with a variety of cellular activities
RG53_RS01085	SM00938	Nitrogen regulatory protein P-II
RG53_RS01120	SM00052	Putative diguanylate phosphodiesterase
RG53_RS01130	SM01266	RG53_RS01130
RG53_RS01200	SM00382	ATPases associated with a variety of cellular activities
RG53_RS01210	SM00493	RG53_RS01210
RG53_RS01215	SM00387	Histidine kinase-like ATPases
RG53_RS01270	SM00530	Helix-turn-helix XRE-family like proteins 
RG53_RS01295	SM00422	helix_turn_helix, mercury resistance
RG53_RS01305	SM00244	prohibitin homologues
RG53_RS01310	SM00382	ATPases associated with a variety of cellular activities
RG53_RS01325	SM00822	RG53_RS01325
RG53_RS01335	SM00382	ATPases associated with a variety of cellular activities
RG53_RS01365	SM00450	Rhodanese Homology Domain
RG53_RS01380	SM00346	helix_turn_helix isocitrate lyase regulation
RG53_RS01460	SM01001	AIR carboxylase
RG53_RS01480	SM00840	RG53_RS01480
RG53_RS01525	SM00421	helix_turn_helix, Lux Regulon
RG53_RS01525	SM00448	cheY-homologous receiver domain
RG53_RS01535	SM00342	helix_turn_helix, arabinose operon control protein
RG53_RS01550	SM00028	Tetratricopeptide repeats
RG53_RS01635	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RG53_RS01635	SM00387	Histidine kinase-like ATPases
RG53_RS01635	SM00388	His Kinase A (phosphoacceptor) domain
RG53_RS01640	SM00448	cheY-homologous receiver domain
RG53_RS01640	SM00862	Transcriptional regulatory protein, C terminal
RG53_RS01740	SM00923	MbtH-like protein
RG53_RS01745	SM00823	Phosphopantetheine attachment site
RG53_RS01745	SM00824	Thioesterase
RG53_RS01755	SM00382	ATPases associated with a variety of cellular activities
RG53_RS01800	SM00822	RG53_RS01800
RG53_RS01830	SM00470	ParB-like nuclease domain
RG53_RS01920	SM00764	Citrate lyase ligase C-terminal domain
RG53_RS01925	SM00091	PAS domain
RG53_RS01925	SM00387	Histidine kinase-like ATPases
RG53_RS01930	SM00448	cheY-homologous receiver domain
RG53_RS01950	SM00357	Cold shock protein domain
RG53_RS01970	SM00729	Elongator protein 3, MiaB family, Radical SAM
RG53_RS02000	SM00936	Penicillin-binding protein 5, C-terminal domain 
RG53_RS02030	SM00855	Phosphoglycerate mutase family
RG53_RS02060	SM00671	Sel1-like repeats.
RG53_RS02070	SM00271	DnaJ molecular chaperone homology domain
RG53_RS02075	SM00671	Sel1-like repeats.
RG53_RS02100	SM00382	ATPases associated with a variety of cellular activities
RG53_RS02115	SM00062	Bacterial periplasmic substrate-binding proteins
RG53_RS02135	SM00116	Domain in cystathionine beta-synthase and other proteins.
RG53_RS02135	SM01091	Transporter associated domain
RG53_RS02150	SM00729	Elongator protein 3, MiaB family, Radical SAM
RG53_RS02310	SM00448	cheY-homologous receiver domain
RG53_RS02310	SM00862	Transcriptional regulatory protein, C terminal
RG53_RS02315	SM00387	Histidine kinase-like ATPases
RG53_RS02315	SM00388	His Kinase A (phosphoacceptor) domain
RG53_RS02395	SM00796	Allophanate hydrolase subunit 1
RG53_RS02400	SM00797	Allophanate hydrolase subunit 2
RG53_RS02410	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
RG53_RS02410	SM01232	RG53_RS02410
RG53_RS02485	SM00861	Transketolase, pyrimidine binding domain
RG53_RS02500	SM00881	CoA binding domain
RG53_RS02505	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RG53_RS02505	SM00866	RG53_RS02505
RG53_RS02515	SM00872	Alpha mannosidase, middle domain
RG53_RS02650	SM00855	Phosphoglycerate mutase family
RG53_RS02675	SM00382	ATPases associated with a variety of cellular activities
RG53_RS02705	SM00382	ATPases associated with a variety of cellular activities
RG53_RS02760	SM00729	Elongator protein 3, MiaB family, Radical SAM
RG53_RS02760	SM00876	Biotin and Thiamin Synthesis associated domain
RG53_RS02780	SM00487	DEAD-like helicases superfamily
RG53_RS02780	SM00490	helicase superfamily c-terminal domain
RG53_RS02790	SM00729	Elongator protein 3, MiaB family, Radical SAM
RG53_RS02795	SM00852	Probable molybdopterin binding domain
RG53_RS02830	SM00155	Phospholipase D. Active site motifs.
RG53_RS02855	SM00382	ATPases associated with a variety of cellular activities
RG53_RS02870	SM00487	DEAD-like helicases superfamily
RG53_RS02870	SM00490	helicase superfamily c-terminal domain
RG53_RS02885	SM00487	DEAD-like helicases superfamily
RG53_RS02885	SM00488	RG53_RS02885
RG53_RS02885	SM00491	RG53_RS02885
RG53_RS02910	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
RG53_RS02940	SM00382	ATPases associated with a variety of cellular activities
RG53_RS02950	SM00062	Bacterial periplasmic substrate-binding proteins
RG53_RS02950	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
RG53_RS02995	SM00529	Helix-turn-helix diphteria tox regulatory element
RG53_RS03010	SM00382	ATPases associated with a variety of cellular activities
RG53_RS03050	SM00852	Probable molybdopterin binding domain
RG53_RS03060	SM00382	ATPases associated with a variety of cellular activities
RG53_RS03080	SM00052	Putative diguanylate phosphodiesterase
RG53_RS03085	SM00267	diguanylate cyclase
RG53_RS03090	SM00729	Elongator protein 3, MiaB family, Radical SAM
RG53_RS03110	SM00936	Penicillin-binding protein 5, C-terminal domain 
RG53_RS03115	SM00420	helix_turn_helix, Deoxyribose operon repressor
RG53_RS03115	SM01134	RG53_RS03115
RG53_RS03120	SM00014	Acid phosphatase homologues
RG53_RS03335	SM00857	Resolvase, N terminal domain
RG53_RS03425	SM00382	ATPases associated with a variety of cellular activities
RG53_RS03455	SM00062	Bacterial periplasmic substrate-binding proteins
RG53_RS03455	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
RG53_RS03470	SM00062	Bacterial periplasmic substrate-binding proteins
RG53_RS03470	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
RG53_RS03475	SM00382	ATPases associated with a variety of cellular activities
RG53_RS03490	SM00644	RG53_RS03490
RG53_RS03555	SM00382	ATPases associated with a variety of cellular activities
RG53_RS03560	SM00357	Cold shock protein domain
RG53_RS03570	SM00382	ATPases associated with a variety of cellular activities
RG53_RS03570	SM01086	C-terminal, D2-small domain, of ClpB protein
RG53_RS03585	SM00316	Ribosomal protein S1-like RNA-binding domain
RG53_RS03600	SM00382	ATPases associated with a variety of cellular activities
RG53_RS03605	SM00382	ATPases associated with a variety of cellular activities
RG53_RS03620	SM00344	helix_turn_helix ASNC type
RG53_RS03625	SM00843	RG53_RS03625
RG53_RS03635	SM00382	ATPases associated with a variety of cellular activities
RG53_RS03645	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
RG53_RS03725	SM00316	Ribosomal protein S1-like RNA-binding domain
RG53_RS03730	SM00411	bacterial (prokaryotic) histone like domain
RG53_RS03735	SM00849	Metallo-beta-lactamase superfamily
RG53_RS03740	SM00382	ATPases associated with a variety of cellular activities
RG53_RS03810	SM00849	Metallo-beta-lactamase superfamily
RG53_RS03855	SM00382	ATPases associated with a variety of cellular activities
RG53_RS03870	SM00062	Bacterial periplasmic substrate-binding proteins
RG53_RS03935	SM00981	RG53_RS03935
RG53_RS03940	SM00382	ATPases associated with a variety of cellular activities
RG53_RS04015	SM00851	MGS-like domain
RG53_RS04030	SM00881	CoA binding domain
RG53_RS04035	SM00992	Hemimethylated DNA-binding protein YccV like
RG53_RS04040	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
RG53_RS04120	SM00226	Low molecular weight phosphatase family
RG53_RS04150	SM00357	Cold shock protein domain
RG53_RS04155	SM00357	Cold shock protein domain
RG53_RS04180	SM00073	Histidine Phosphotransfer domain
RG53_RS04180	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RG53_RS04180	SM00387	Histidine kinase-like ATPases
RG53_RS04180	SM00388	His Kinase A (phosphoacceptor) domain
RG53_RS04180	SM00448	cheY-homologous receiver domain
RG53_RS04190	SM00448	cheY-homologous receiver domain
RG53_RS04190	SM00862	Transcriptional regulatory protein, C terminal
RG53_RS04215	SM00271	DnaJ molecular chaperone homology domain
RG53_RS04255	SM00903	Flavin reductase like domain
RG53_RS04355	SM00028	Tetratricopeptide repeats
RG53_RS04360	SM00267	diguanylate cyclase
RG53_RS04395	SM00481	DNA polymerase alpha chain like domain
RG53_RS04425	SM00421	helix_turn_helix, Lux Regulon
RG53_RS04460	SM00506	Appr-1"-p processing enzyme
RG53_RS04465	SM00155	Phospholipase D. Active site motifs.
RG53_RS04510	SM00450	Rhodanese Homology Domain
RG53_RS04515	SM00867	YceI-like domain 
RG53_RS04600	SM00858	RG53_RS04600
RG53_RS04645	SM00047	Lysozyme subfamily 2
RG53_RS04660	SM00316	Ribosomal protein S1-like RNA-binding domain
RG53_RS04670	SM00363	S4 RNA-binding domain
RG53_RS04700	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
RG53_RS04705	SM00822	RG53_RS04705
RG53_RS04715	SM00825	Beta-ketoacyl synthase
RG53_RS04810	SM00257	Lysin motif
RG53_RS04815	SM00487	DEAD-like helicases superfamily
RG53_RS04815	SM00490	helicase superfamily c-terminal domain
RG53_RS04815	SM00982	RG53_RS04815
RG53_RS04815	SM01058	CarD-like/TRCF domain
RG53_RS04830	SM00382	ATPases associated with a variety of cellular activities
RG53_RS04875	SM00382	ATPases associated with a variety of cellular activities
RG53_RS04890	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
RG53_RS04895	SM00387	Histidine kinase-like ATPases
RG53_RS04900	SM00448	cheY-homologous receiver domain
RG53_RS04900	SM00862	Transcriptional regulatory protein, C terminal
RG53_RS04930	SM01329	RG53_RS04930
RG53_RS04950	SM00422	helix_turn_helix, mercury resistance
RG53_RS04955	SM00052	Putative diguanylate phosphodiesterase
RG53_RS04955	SM01034	Sensors of blue-light using FAD
RG53_RS04980	SM00052	Putative diguanylate phosphodiesterase
RG53_RS04995	SM00869	Autotransporter beta-domain
RG53_RS05110	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RG53_RS05125	SM01005	Alanine racemase, C-terminal domain
RG53_RS05130	SM01091	Transporter associated domain
RG53_RS05180	SM01120	RG53_RS05180
RG53_RS05190	SM00091	PAS domain
RG53_RS05190	SM00382	ATPases associated with a variety of cellular activities
RG53_RS05195	SM00869	Autotransporter beta-domain
RG53_RS05235	SM01400	RG53_RS05235
RG53_RS05255	SM00937	RG53_RS05255
RG53_RS05335	SM00421	helix_turn_helix, Lux Regulon
RG53_RS05335	SM00448	cheY-homologous receiver domain
RG53_RS05340	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RG53_RS05340	SM00387	Histidine kinase-like ATPases
RG53_RS05355	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
RG53_RS05405	SM00448	cheY-homologous receiver domain
RG53_RS05415	SM00528	Domain in histone-like proteins of HNS family
RG53_RS05455	SM00382	ATPases associated with a variety of cellular activities
RG53_RS05460	SM00382	ATPases associated with a variety of cellular activities
RG53_RS05470	SM00155	Phospholipase D. Active site motifs.
RG53_RS05560	SM00481	DNA polymerase alpha chain like domain
RG53_RS05585	SM00857	Resolvase, N terminal domain
RG53_RS05600	SM00363	S4 RNA-binding domain
RG53_RS05610	SM00822	RG53_RS05610
RG53_RS05630	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
RG53_RS05630	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
RG53_RS05630	SM00493	RG53_RS05630
RG53_RS05670	SM00014	Acid phosphatase homologues
RG53_RS05680	SM00028	Tetratricopeptide repeats
RG53_RS05685	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
RG53_RS05700	SM00420	helix_turn_helix, Deoxyribose operon repressor
RG53_RS05700	SM01134	RG53_RS05700
RG53_RS05710	SM00052	Putative diguanylate phosphodiesterase
RG53_RS05710	SM00091	PAS domain
RG53_RS05710	SM00267	diguanylate cyclase
RG53_RS05720	SM00357	Cold shock protein domain
RG53_RS05720	SM00955	RG53_RS05720
RG53_RS05740	SM00382	ATPases associated with a variety of cellular activities
RG53_RS05745	SM00382	ATPases associated with a variety of cellular activities
RG53_RS05780	SM01230	RG53_RS05780
RG53_RS05790	SM00530	Helix-turn-helix XRE-family like proteins 
RG53_RS05810	SM00382	ATPases associated with a variety of cellular activities
RG53_RS05835	SM00450	Rhodanese Homology Domain
RG53_RS05840	SM00642	Alpha-amylase domain
RG53_RS05885	SM00382	ATPases associated with a variety of cellular activities
RG53_RS05895	SM00354	helix_turn _helix lactose operon repressor
RG53_RS05910	SM00091	PAS domain
RG53_RS05910	SM00382	ATPases associated with a variety of cellular activities
RG53_RS05920	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
RG53_RS05970	SM00100	Cyclic nucleotide-monophosphate binding domain
RG53_RS05970	SM00419	helix_turn_helix, cAMP Regulatory protein
RG53_RS06005	SM00463	Small MutS-related domain
RG53_RS06010	SM00091	PAS domain
RG53_RS06010	SM00267	diguanylate cyclase
RG53_RS06025	SM00487	DEAD-like helicases superfamily
RG53_RS06025	SM00490	helicase superfamily c-terminal domain
RG53_RS06045	SM00890	Domain of unknown function
RG53_RS06080	SM00342	helix_turn_helix, arabinose operon control protein
RG53_RS06190	SM00195	Dual specificity phosphatase, catalytic domain
RG53_RS06190	SM00404	Protein tyrosine phosphatase, catalytic domain motif
RG53_RS06200	SM00382	ATPases associated with a variety of cellular activities
RG53_RS06200	SM00487	DEAD-like helicases superfamily
RG53_RS06200	SM00490	helicase superfamily c-terminal domain
RG53_RS06200	SM00847	Helicase associated domain (HA2)  Add an annotation
RG53_RS06215	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
RG53_RS06235	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RG53_RS06235	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RG53_RS06235	SM00319	Homologues of the ligand binding domain of Tar
RG53_RS06245	SM01150	RG53_RS06245
RG53_RS06310	SM00530	Helix-turn-helix XRE-family like proteins 
RG53_RS06330	SM00530	Helix-turn-helix XRE-family like proteins 
RG53_RS06335	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RG53_RS06345	SM00382	ATPases associated with a variety of cellular activities
RG53_RS06400	SM00829	Enoylreductase
RG53_RS06405	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RG53_RS06405	SM00895	RG53_RS06405
RG53_RS06510	SM00903	Flavin reductase like domain
RG53_RS06540	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
RG53_RS06565	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
RG53_RS06585	SM00530	Helix-turn-helix XRE-family like proteins 
RG53_RS06590	SM00829	Enoylreductase
RG53_RS06595	SM00919	Malic enzyme, NAD binding domain
RG53_RS06595	SM01274	RG53_RS06595
RG53_RS06620	SM00382	ATPases associated with a variety of cellular activities
RG53_RS06625	SM00382	ATPases associated with a variety of cellular activities
RG53_RS06650	SM00052	Putative diguanylate phosphodiesterase
RG53_RS06650	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RG53_RS06650	SM00091	PAS domain
RG53_RS06650	SM00267	diguanylate cyclase
RG53_RS06660	SM00267	diguanylate cyclase
RG53_RS06700	SM00382	ATPases associated with a variety of cellular activities
RG53_RS06715	SM00342	helix_turn_helix, arabinose operon control protein
RG53_RS06800	SM00487	DEAD-like helicases superfamily
RG53_RS06800	SM00490	helicase superfamily c-terminal domain
RG53_RS06810	SM00530	Helix-turn-helix XRE-family like proteins 
RG53_RS06860	SM00052	Putative diguanylate phosphodiesterase
RG53_RS06865	SM00421	helix_turn_helix, Lux Regulon
RG53_RS06900	SM00487	DEAD-like helicases superfamily
RG53_RS06920	SM00530	Helix-turn-helix XRE-family like proteins 
RG53_RS06950	SM00530	Helix-turn-helix XRE-family like proteins 
RG53_RS06955	SM00869	Autotransporter beta-domain
RG53_RS06975	SM00382	ATPases associated with a variety of cellular activities
RG53_RS06995	SM01133	RG53_RS06995
RG53_RS07030	SM00267	diguanylate cyclase
RG53_RS07070	SM00347	helix_turn_helix multiple antibiotic resistance protein
RG53_RS07075	SM00342	helix_turn_helix, arabinose operon control protein
RG53_RS07110	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RG53_RS07115	SM00866	RG53_RS07115
RG53_RS07135	SM00267	diguanylate cyclase
RG53_RS07170	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RG53_RS07170	SM00895	RG53_RS07170
RG53_RS07195	SM00857	Resolvase, N terminal domain
RG53_RS07215	SM00060	Fibronectin type 3 domain
RG53_RS07225	SM00232	JAB/MPN domain
RG53_RS07255	SM00635	Bacterial Ig-like domain 2
RG53_RS07340	SM00357	Cold shock protein domain
RG53_RS07365	SM00342	helix_turn_helix, arabinose operon control protein
RG53_RS07390	SM00507	HNH nucleases
RG53_RS07485	SM00530	Helix-turn-helix XRE-family like proteins 
RG53_RS07545	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
RG53_RS07580	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
RG53_RS07585	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
RG53_RS07670	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
RG53_RS07670	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
RG53_RS07700	SM00448	cheY-homologous receiver domain
RG53_RS07700	SM00862	Transcriptional regulatory protein, C terminal
RG53_RS07705	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RG53_RS07705	SM00387	Histidine kinase-like ATPases
RG53_RS07705	SM00388	His Kinase A (phosphoacceptor) domain
RG53_RS07780	SM00354	helix_turn _helix lactose operon repressor
RG53_RS07845	SM00900	RG53_RS07845
RG53_RS07855	SM00478	endonuclease III
RG53_RS07855	SM00525	RG53_RS07855
RG53_RS07880	SM00363	S4 RNA-binding domain
RG53_RS07905	SM00347	helix_turn_helix multiple antibiotic resistance protein
RG53_RS07955	SM00479	RG53_RS07955
RG53_RS07960	SM00382	ATPases associated with a variety of cellular activities
RG53_RS07960	SM00487	DEAD-like helicases superfamily
RG53_RS07960	SM00490	helicase superfamily c-terminal domain
RG53_RS07995	SM00354	helix_turn _helix lactose operon repressor
RG53_RS08070	SM00790	Aldehyde ferredoxin oxidoreductase, N-terminal domain
RG53_RS08095	SM00257	Lysin motif
RG53_RS08115	SM00382	ATPases associated with a variety of cellular activities
RG53_RS08185	SM00882	Coenzyme A transferase
RG53_RS08195	SM00342	helix_turn_helix, arabinose operon control protein
RG53_RS08205	SM00893	Electron transfer flavoprotein domain
RG53_RS08210	SM00893	Electron transfer flavoprotein domain
RG53_RS08265	SM00382	ATPases associated with a variety of cellular activities
RG53_RS08280	SM00411	bacterial (prokaryotic) histone like domain
RG53_RS08285	SM00873	B3/4 domain
RG53_RS08285	SM00874	tRNA synthetase B5 domain
RG53_RS08285	SM00896	Ferredoxin-fold anticodon binding domain
RG53_RS08320	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
RG53_RS08390	SM01060	RG53_RS08390
RG53_RS08415	SM00342	helix_turn_helix, arabinose operon control protein
RG53_RS08450	SM00465	GIY-YIG type nucleases (URI domain)
RG53_RS08530	SM00382	ATPases associated with a variety of cellular activities
RG53_RS08535	SM00450	Rhodanese Homology Domain
RG53_RS08555	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
RG53_RS08565	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
RG53_RS08565	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
RG53_RS08565	SM00493	RG53_RS08565
RG53_RS08590	SM00870	RG53_RS08590
RG53_RS08610	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
RG53_RS08630	SM00763	PrkA AAA domain
RG53_RS08640	SM00267	diguanylate cyclase
RG53_RS08645	SM00267	diguanylate cyclase
RG53_RS08665	SM00342	helix_turn_helix, arabinose operon control protein
RG53_RS08685	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
RG53_RS08685	SM00267	diguanylate cyclase
RG53_RS08710	SM01321	RG53_RS08710
RG53_RS08740	SM01329	RG53_RS08740
RG53_RS08760	SM00341	Helicase and RNase D C-terminal
RG53_RS08760	SM00474	3'-5' exonuclease
RG53_RS08780	SM00487	DEAD-like helicases superfamily
RG53_RS08780	SM00491	RG53_RS08780
RG53_RS08815	SM00052	Putative diguanylate phosphodiesterase
RG53_RS08820	SM01091	Transporter associated domain
RG53_RS08870	SM00357	Cold shock protein domain
RG53_RS08900	SM00346	helix_turn_helix isocitrate lyase regulation
RG53_RS08915	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RG53_RS08915	SM00245	tail specific protease
RG53_RS08920	SM00945	ProQ/FINO family
RG53_RS08925	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
RG53_RS08990	SM00479	RG53_RS08990
RG53_RS09075	SM00257	Lysin motif
RG53_RS09085	SM00382	ATPases associated with a variety of cellular activities
RG53_RS09095	SM00382	ATPases associated with a variety of cellular activities
RG53_RS09100	SM00278	Helix-hairpin-helix DNA-binding motif class 1
RG53_RS09195	SM00836	DALR anticodon binding domain
RG53_RS09195	SM01016	Arginyl tRNA synthetase N terminal dom
RG53_RS09225	SM00448	cheY-homologous receiver domain
RG53_RS09230	SM00448	cheY-homologous receiver domain
RG53_RS09235	SM00138	Methyltransferase, chemotaxis proteins 
RG53_RS09240	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RG53_RS09240	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RG53_RS09240	SM00319	Homologues of the ligand binding domain of Tar
RG53_RS09245	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RG53_RS09245	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RG53_RS09245	SM00319	Homologues of the ligand binding domain of Tar
RG53_RS09250	SM00260	Two component signalling adaptor domain
RG53_RS09255	SM00073	Histidine Phosphotransfer domain
RG53_RS09255	SM00260	Two component signalling adaptor domain
RG53_RS09255	SM00387	Histidine kinase-like ATPases
RG53_RS09255	SM01231	RG53_RS09255
RG53_RS09300	SM00382	ATPases associated with a variety of cellular activities
RG53_RS09375	SM00278	Helix-hairpin-helix DNA-binding motif class 1
RG53_RS09375	SM00465	GIY-YIG type nucleases (URI domain)
RG53_RS09380	SM00421	helix_turn_helix, Lux Regulon
RG53_RS09380	SM00448	cheY-homologous receiver domain
RG53_RS09395	SM00421	helix_turn_helix, Lux Regulon
RG53_RS09400	SM00382	ATPases associated with a variety of cellular activities
RG53_RS09415	SM00062	Bacterial periplasmic substrate-binding proteins
RG53_RS09415	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
RG53_RS09455	SM00642	Alpha-amylase domain
RG53_RS09515	SM00382	ATPases associated with a variety of cellular activities
RG53_RS09565	SM00421	helix_turn_helix, Lux Regulon
RG53_RS09590	SM00267	diguanylate cyclase
RG53_RS09625	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RG53_RS09655	SM00387	Histidine kinase-like ATPases
RG53_RS09655	SM00388	His Kinase A (phosphoacceptor) domain
RG53_RS09660	SM00448	cheY-homologous receiver domain
RG53_RS09660	SM00862	Transcriptional regulatory protein, C terminal
RG53_RS09665	SM00095	Transthyretin
RG53_RS09795	SM00342	helix_turn_helix, arabinose operon control protein
RG53_RS09805	SM00877	RG53_RS09805
RG53_RS09810	SM00877	RG53_RS09810
RG53_RS09840	SM00877	RG53_RS09840
RG53_RS09845	SM00877	RG53_RS09845
RG53_RS09885	SM00877	RG53_RS09885
RG53_RS09890	SM00877	RG53_RS09890
RG53_RS09910	SM00871	Bacterial transcription activator, effector binding domain
RG53_RS09915	SM00936	Penicillin-binding protein 5, C-terminal domain 
RG53_RS09920	SM00479	RG53_RS09920
RG53_RS10030	SM00382	ATPases associated with a variety of cellular activities
RG53_RS10065	SM00984	UDP binding domain
RG53_RS10070	SM01350	RG53_RS10070
RG53_RS10210	SM00226	Low molecular weight phosphatase family
RG53_RS10220	SM00116	Domain in cystathionine beta-synthase and other proteins.
RG53_RS10220	SM01091	Transporter associated domain
RG53_RS10245	SM00052	Putative diguanylate phosphodiesterase
RG53_RS10245	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RG53_RS10245	SM00091	PAS domain
RG53_RS10245	SM00267	diguanylate cyclase
RG53_RS10250	SM00478	endonuclease III
RG53_RS10250	SM01009	AlkA N-terminal domain
RG53_RS10270	SM00327	von Willebrand factor (vWF) type A domain
RG53_RS10305	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RG53_RS10305	SM00387	Histidine kinase-like ATPases
RG53_RS10305	SM00388	His Kinase A (phosphoacceptor) domain
RG53_RS10310	SM00448	cheY-homologous receiver domain
RG53_RS10310	SM00862	Transcriptional regulatory protein, C terminal
RG53_RS10530	SM00530	Helix-turn-helix XRE-family like proteins 
RG53_RS10550	SM00046	Diacylglycerol kinase catalytic domain (presumed)
RG53_RS10555	SM00420	helix_turn_helix, Deoxyribose operon repressor
RG53_RS10555	SM01134	RG53_RS10555
RG53_RS10560	SM00829	Enoylreductase
RG53_RS10595	SM01133	RG53_RS10595
RG53_RS10615	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RG53_RS10615	SM00866	RG53_RS10615
RG53_RS10620	SM00641	Glycosyl hydrolases family 25
RG53_RS10690	SM00773	Proposed nucleic acid binding domain
RG53_RS10715	SM00382	ATPases associated with a variety of cellular activities
RG53_RS10725	SM00327	von Willebrand factor (vWF) type A domain
RG53_RS10745	SM00448	cheY-homologous receiver domain
RG53_RS10745	SM00850	LytTr DNA-binding domain
RG53_RS10750	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
RG53_RS10755	SM00422	helix_turn_helix, mercury resistance
RG53_RS10770	SM00382	ATPases associated with a variety of cellular activities
RG53_RS10785	SM01217	RG53_RS10785
RG53_RS10875	SM00382	ATPases associated with a variety of cellular activities
RG53_RS10885	SM00354	helix_turn _helix lactose operon repressor
RG53_RS10945	SM00518	AP endonuclease family 2
RG53_RS10965	SM00100	Cyclic nucleotide-monophosphate binding domain
RG53_RS11010	SM00841	Elongation factor P, C-terminal
RG53_RS11010	SM01185	RG53_RS11010
RG53_RS11020	SM00833	Cobalamin synthesis protein cobW C-terminal domain
RG53_RS11025	SM00014	Acid phosphatase homologues
RG53_RS11035	SM00052	Putative diguanylate phosphodiesterase
RG53_RS11055	SM00382	ATPases associated with a variety of cellular activities
RG53_RS11075	SM00363	S4 RNA-binding domain
RG53_RS11085	SM00487	DEAD-like helicases superfamily
RG53_RS11085	SM00490	helicase superfamily c-terminal domain
RG53_RS11125	SM00421	helix_turn_helix, Lux Regulon
RG53_RS11125	SM00448	cheY-homologous receiver domain
RG53_RS11165	SM00382	ATPases associated with a variety of cellular activities
RG53_RS11190	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
RG53_RS11220	SM00382	ATPases associated with a variety of cellular activities
RG53_RS11230	SM00342	helix_turn_helix, arabinose operon control protein
RG53_RS11255	SM00387	Histidine kinase-like ATPases
RG53_RS11260	SM00421	helix_turn_helix, Lux Regulon
RG53_RS11260	SM00448	cheY-homologous receiver domain
RG53_RS11270	SM00387	Histidine kinase-like ATPases
RG53_RS11270	SM00388	His Kinase A (phosphoacceptor) domain
RG53_RS11270	SM00448	cheY-homologous receiver domain
RG53_RS11285	SM01359	RG53_RS11285
RG53_RS11285	SM01360	RG53_RS11285
RG53_RS11300	SM00434	DNA Topoisomerase IV
RG53_RS11310	SM00869	Autotransporter beta-domain
RG53_RS11390	SM00852	Probable molybdopterin binding domain
RG53_RS11455	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
RG53_RS11490	SM00849	Metallo-beta-lactamase superfamily
RG53_RS11545	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
RG53_RS11545	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
RG53_RS11550	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
RG53_RS11590	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RG53_RS11655	SM00905	Dihydroneopterin aldolase
RG53_RS11670	SM00382	ATPases associated with a variety of cellular activities
RG53_RS11685	SM00062	Bacterial periplasmic substrate-binding proteins
RG53_RS11690	SM00062	Bacterial periplasmic substrate-binding proteins
RG53_RS11735	SM00859	Semialdehyde dehydrogenase, NAD binding domain
RG53_RS11760	SM00825	Beta-ketoacyl synthase
RG53_RS11805	SM00463	Small MutS-related domain
RG53_RS11915	SM00640	Glycosyl hydrolases family 32
RG53_RS11920	SM00354	helix_turn _helix lactose operon repressor
RG53_RS11945	SM00421	helix_turn_helix, Lux Regulon
RG53_RS11945	SM00448	cheY-homologous receiver domain
RG53_RS11950	SM00062	Bacterial periplasmic substrate-binding proteins
RG53_RS11950	SM00073	Histidine Phosphotransfer domain
RG53_RS11950	SM00387	Histidine kinase-like ATPases
RG53_RS11950	SM00388	His Kinase A (phosphoacceptor) domain
RG53_RS11950	SM00448	cheY-homologous receiver domain
RG53_RS12010	SM00387	Histidine kinase-like ATPases
RG53_RS12015	SM00448	cheY-homologous receiver domain
RG53_RS12015	SM00850	LytTr DNA-binding domain
RG53_RS12020	SM00342	helix_turn_helix, arabinose operon control protein
RG53_RS12080	SM00052	Putative diguanylate phosphodiesterase
RG53_RS12080	SM00267	diguanylate cyclase
RG53_RS12150	SM00278	Helix-hairpin-helix DNA-binding motif class 1
RG53_RS12150	SM00292	breast cancer carboxy-terminal domain
RG53_RS12150	SM00532	Ligase N family
RG53_RS12155	SM00771	ZipA, C-terminal domain (FtsZ-binding)
RG53_RS12205	SM00382	ATPases associated with a variety of cellular activities
RG53_RS12225	SM00822	RG53_RS12225
RG53_RS12270	SM00646	RG53_RS12270
RG53_RS12280	SM00342	helix_turn_helix, arabinose operon control protein
RG53_RS12285	SM00877	RG53_RS12285
RG53_RS12290	SM00877	RG53_RS12290
RG53_RS12335	SM00877	RG53_RS12335
RG53_RS12360	SM00877	RG53_RS12360
RG53_RS12365	SM00919	Malic enzyme, NAD binding domain
RG53_RS12365	SM01274	RG53_RS12365
RG53_RS12375	SM00861	Transketolase, pyrimidine binding domain
RG53_RS12395	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RG53_RS12395	SM00387	Histidine kinase-like ATPases
RG53_RS12470	SM01130	RG53_RS12470
RG53_RS12540	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
RG53_RS12540	SM00382	ATPases associated with a variety of cellular activities
RG53_RS12605	SM00052	Putative diguanylate phosphodiesterase
RG53_RS12605	SM00267	diguanylate cyclase
RG53_RS12640	SM00116	Domain in cystathionine beta-synthase and other proteins.
RG53_RS12640	SM01240	RG53_RS12640
RG53_RS12660	SM00564	beta-propeller repeat
RG53_RS12680	SM00530	Helix-turn-helix XRE-family like proteins 
RG53_RS12690	SM00562	RG53_RS12690
RG53_RS12700	SM01359	RG53_RS12700
RG53_RS12700	SM01360	RG53_RS12700
RG53_RS12705	SM00450	Rhodanese Homology Domain
RG53_RS12735	SM00271	DnaJ molecular chaperone homology domain
RG53_RS12825	SM00829	Enoylreductase
RG53_RS12835	SM00382	ATPases associated with a variety of cellular activities
RG53_RS12845	SM00028	Tetratricopeptide repeats
RG53_RS12870	SM00938	Nitrogen regulatory protein P-II
RG53_RS12875	SM00382	ATPases associated with a variety of cellular activities
RG53_RS12875	SM00448	cheY-homologous receiver domain
RG53_RS12885	SM00387	Histidine kinase-like ATPases
RG53_RS12885	SM00388	His Kinase A (phosphoacceptor) domain
RG53_RS12890	SM01211	RG53_RS12890
RG53_RS12900	SM00062	Bacterial periplasmic substrate-binding proteins
RG53_RS12960	SM00358	Double-stranded RNA binding motif
RG53_RS12960	SM00535	Ribonuclease III family
RG53_RS13015	SM00487	DEAD-like helicases superfamily
RG53_RS13015	SM00490	helicase superfamily c-terminal domain
RG53_RS13035	SM00986	Uracil DNA glycosylase superfamily
RG53_RS13035	SM00987	UreE urease accessory protein, C-terminal domain 
RG53_RS13040	SM00967	RNA 2'-O ribose methyltransferase substrate binding
RG53_RS13050	SM01144	RG53_RS13050
RG53_RS13055	SM00881	CoA binding domain
RG53_RS13060	SM00155	Phospholipase D. Active site motifs.
RG53_RS13100	SM00382	ATPases associated with a variety of cellular activities
RG53_RS13100	SM01086	C-terminal, D2-small domain, of ClpB protein
RG53_RS13110	SM00363	S4 RNA-binding domain
RG53_RS13130	SM00830	Chorismate mutase type II
RG53_RS13135	SM00830	Chorismate mutase type II
RG53_RS13155	SM00267	diguanylate cyclase
RG53_RS13185	SM00382	ATPases associated with a variety of cellular activities
RG53_RS13185	SM00962	SRP54-type protein, GTPase domain
RG53_RS13185	SM00963	SRP54-type protein, helical bundle domain
RG53_RS13195	SM01091	Transporter associated domain
RG53_RS13405	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RG53_RS13405	SM00895	RG53_RS13405
RG53_RS13410	SM00257	Lysin motif
RG53_RS13410	SM00749	bacterial OsmY and nodulation domain
RG53_RS13420	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RG53_RS13425	SM00450	Rhodanese Homology Domain
RG53_RS13430	SM00528	Domain in histone-like proteins of HNS family
RG53_RS13470	SM00382	ATPases associated with a variety of cellular activities
RG53_RS13500	SM00347	helix_turn_helix multiple antibiotic resistance protein
RG53_RS13565	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
RG53_RS13580	SM00382	ATPases associated with a variety of cellular activities
RG53_RS13620	SM00420	helix_turn_helix, Deoxyribose operon repressor
RG53_RS13620	SM01134	RG53_RS13620
RG53_RS13630	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
RG53_RS13630	SM00382	ATPases associated with a variety of cellular activities
RG53_RS13635	SM00849	Metallo-beta-lactamase superfamily
RG53_RS13655	SM00354	helix_turn _helix lactose operon repressor
RG53_RS13670	SM00530	Helix-turn-helix XRE-family like proteins 
RG53_RS13755	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
RG53_RS13755	SM00382	ATPases associated with a variety of cellular activities
RG53_RS13770	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
RG53_RS13770	SM00534	ATPase domain of DNA mismatch repair MUTS family
RG53_RS13780	SM00420	helix_turn_helix, Deoxyribose operon repressor
RG53_RS13780	SM01134	RG53_RS13780
RG53_RS13795	SM01007	Class II Aldolase and Adducin N-terminal domain
RG53_RS13825	SM00347	helix_turn_helix multiple antibiotic resistance protein
RG53_RS13835	SM00257	Lysin motif
RG53_RS13905	SM01101	RG53_RS13905
RG53_RS13935	SM00487	DEAD-like helicases superfamily
RG53_RS13985	SM00893	Electron transfer flavoprotein domain
RG53_RS14030	SM01192	RG53_RS14030
RG53_RS14030	SM01193	RG53_RS14030
RG53_RS14050	SM00966	SpoVT / AbrB like domain 
RG53_RS14055	SM00954	Region found in RelA / SpoT proteins
RG53_RS14065	SM00073	Histidine Phosphotransfer domain
RG53_RS14065	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RG53_RS14065	SM00387	Histidine kinase-like ATPases
RG53_RS14065	SM00388	His Kinase A (phosphoacceptor) domain
RG53_RS14065	SM00448	cheY-homologous receiver domain
RG53_RS14070	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
RG53_RS14075	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
RG53_RS14130	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
RG53_RS14130	SM00475	5'-3' exonuclease
RG53_RS14140	SM01007	Class II Aldolase and Adducin N-terminal domain
RG53_RS14165	SM00420	helix_turn_helix, Deoxyribose operon repressor
RG53_RS14165	SM01134	RG53_RS14165
RG53_RS14205	SM00925	MltA specific insert domain
RG53_RS14230	SM00646	RG53_RS14230
RG53_RS14240	SM00382	ATPases associated with a variety of cellular activities
RG53_RS14290	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
RG53_RS14310	SM00927	DNA mismatch repair enzyme MutH
RG53_RS14335	SM00563	Phosphate acyltransferases
RG53_RS14345	SM00354	helix_turn _helix lactose operon repressor
RG53_RS14395	SM00862	Transcriptional regulatory protein, C terminal
RG53_RS14425	SM00862	Transcriptional regulatory protein, C terminal
RG53_RS14445	SM00421	helix_turn_helix, Lux Regulon
RG53_RS14490	SM00421	helix_turn_helix, Lux Regulon
RG53_RS14545	SM00257	Lysin motif
RG53_RS14555	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
RG53_RS14560	SM01092	CO dehydrogenase flavoprotein C-terminal domain
RG53_RS14570	SM00091	PAS domain
RG53_RS14570	SM00382	ATPases associated with a variety of cellular activities
RG53_RS14625	SM01092	CO dehydrogenase flavoprotein C-terminal domain
RG53_RS14630	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
RG53_RS14730	SM01022	RG53_RS14730
RG53_RS14770	SM01011	Aminopeptidase P, N-terminal domain
RG53_RS14900	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
RG53_RS14925	SM00382	ATPases associated with a variety of cellular activities
RG53_RS14930	SM00382	ATPases associated with a variety of cellular activities
RG53_RS14965	SM00861	Transketolase, pyrimidine binding domain
RG53_RS15015	SM00731	SprT homologues.
RG53_RS15040	SM00732	Likely ribonuclease with RNase H fold.
RG53_RS15050	SM00382	ATPases associated with a variety of cellular activities
RG53_RS15065	SM01152	RG53_RS15065
RG53_RS15075	SM00729	Elongator protein 3, MiaB family, Radical SAM
RG53_RS15085	SM00870	RG53_RS15085
RG53_RS15110	SM00478	endonuclease III
RG53_RS15110	SM00525	RG53_RS15110
RG53_RS15190	SM00382	ATPases associated with a variety of cellular activities
RG53_RS15215	SM01276	RG53_RS15215
RG53_RS15260	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RG53_RS15260	SM00895	RG53_RS15260
RG53_RS15460	SM00342	helix_turn_helix, arabinose operon control protein
RG53_RS15490	SM00729	Elongator protein 3, MiaB family, Radical SAM
RG53_RS15500	SM00563	Phosphate acyltransferases
RG53_RS15510	SM00434	DNA Topoisomerase IV
RG53_RS15520	SM00871	Bacterial transcription activator, effector binding domain
RG53_RS15530	SM00448	cheY-homologous receiver domain
RG53_RS15530	SM00862	Transcriptional regulatory protein, C terminal
RG53_RS15535	SM00387	Histidine kinase-like ATPases
RG53_RS15535	SM00388	His Kinase A (phosphoacceptor) domain
RG53_RS15565	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RG53_RS15565	SM00866	RG53_RS15565
RG53_RS15600	SM00387	Histidine kinase-like ATPases
RG53_RS15600	SM00433	TopoisomeraseII
RG53_RS15700	SM00244	prohibitin homologues
RG53_RS15725	SM01118	RG53_RS15725
RG53_RS15735	SM00287	Bacterial SH3 domain homologues
RG53_RS15750	SM00905	Dihydroneopterin aldolase
RG53_RS15755	SM01207	RG53_RS15755
RG53_RS15795	SM00400	zinc finger
RG53_RS15795	SM00493	RG53_RS15795
RG53_RS15795	SM00766	DNA primase DnaG DnaB-binding
RG53_RS15830	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RG53_RS15830	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RG53_RS15855	SM00354	helix_turn _helix lactose operon repressor
RG53_RS15860	SM01038	Beta galactosidase small chain
RG53_RS15890	SM00530	Helix-turn-helix XRE-family like proteins 
RG53_RS15935	SM00858	RG53_RS15935
RG53_RS15970	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RG53_RS15970	SM00895	RG53_RS15970
RG53_RS16140	SM00858	RG53_RS16140
RG53_RS16155	SM00420	helix_turn_helix, Deoxyribose operon repressor
RG53_RS16155	SM01134	RG53_RS16155
RG53_RS16265	SM00749	bacterial OsmY and nodulation domain
RG53_RS16275	SM00859	Semialdehyde dehydrogenase, NAD binding domain
RG53_RS16290	SM00465	GIY-YIG type nucleases (URI domain)
RG53_RS16330	SM00487	DEAD-like helicases superfamily
RG53_RS16330	SM00490	helicase superfamily c-terminal domain
RG53_RS16340	SM00028	Tetratricopeptide repeats
RG53_RS16345	SM00316	Ribosomal protein S1-like RNA-binding domain
RG53_RS16345	SM00322	K homology RNA-binding domain
RG53_RS16350	SM01387	RG53_RS16350
RG53_RS16370	SM00316	Ribosomal protein S1-like RNA-binding domain
RG53_RS16415	SM00382	ATPases associated with a variety of cellular activities
RG53_RS16425	SM01103	RG53_RS16425
RG53_RS16500	SM00382	ATPases associated with a variety of cellular activities
RG53_RS16530	SM00382	ATPases associated with a variety of cellular activities
RG53_RS16575	SM00073	Histidine Phosphotransfer domain
RG53_RS16575	SM00091	PAS domain
RG53_RS16575	SM00387	Histidine kinase-like ATPases
RG53_RS16575	SM00388	His Kinase A (phosphoacceptor) domain
RG53_RS16575	SM00448	cheY-homologous receiver domain
RG53_RS16580	SM00729	Elongator protein 3, MiaB family, Radical SAM
RG53_RS16630	SM01130	RG53_RS16630
RG53_RS16635	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RG53_RS16635	SM00895	RG53_RS16635
RG53_RS16680	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RG53_RS16685	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RG53_RS16740	SM00316	Ribosomal protein S1-like RNA-binding domain
RG53_RS16775	SM00052	Putative diguanylate phosphodiesterase
RG53_RS16775	SM00267	diguanylate cyclase
RG53_RS16780	SM00829	Enoylreductase
RG53_RS16800	SM00878	Biotin carboxylase C-terminal domain
RG53_RS16865	SM00062	Bacterial periplasmic substrate-binding proteins
RG53_RS16880	SM00382	ATPases associated with a variety of cellular activities
RG53_RS16980	SM00422	helix_turn_helix, mercury resistance
RG53_RS16995	SM00662	RNA polymerases D
RG53_RS17000	SM00363	S4 RNA-binding domain
RG53_RS17000	SM01390	RG53_RS17000
RG53_RS17065	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
RG53_RS17070	SM01374	RG53_RS17070
RG53_RS17090	SM00322	K homology RNA-binding domain
RG53_RS17105	SM01382	RG53_RS17105
RG53_RS17105	SM01383	RG53_RS17105
RG53_RS17125	SM01403	RG53_RS17125
RG53_RS17160	SM00838	Elongation factor G C-terminus
RG53_RS17160	SM00889	Elongation factor G, domain IV
RG53_RS17230	SM00382	ATPases associated with a variety of cellular activities
RG53_RS17260	SM00100	Cyclic nucleotide-monophosphate binding domain
RG53_RS17260	SM00419	helix_turn_helix, cAMP Regulatory protein
RG53_RS17350	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RG53_RS17350	SM00866	RG53_RS17350
RG53_RS17430	SM00965	Secretin and TonB N terminus short domain
RG53_RS17475	SM00363	S4 RNA-binding domain
RG53_RS17510	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RG53_RS17510	SM00387	Histidine kinase-like ATPases
RG53_RS17510	SM00388	His Kinase A (phosphoacceptor) domain
RG53_RS17515	SM00448	cheY-homologous receiver domain
RG53_RS17515	SM00862	Transcriptional regulatory protein, C terminal
RG53_RS17530	SM00316	Ribosomal protein S1-like RNA-binding domain
RG53_RS17530	SM00732	Likely ribonuclease with RNase H fold.
RG53_RS17540	SM00899	RG53_RS17540
RG53_RS17600	SM00421	helix_turn_helix, Lux Regulon
RG53_RS17615	SM00382	ATPases associated with a variety of cellular activities
RG53_RS17620	SM00420	helix_turn_helix, Deoxyribose operon repressor
RG53_RS17620	SM01134	RG53_RS17620
RG53_RS17630	SM00450	Rhodanese Homology Domain
RG53_RS17675	SM00642	Alpha-amylase domain
RG53_RS17680	SM00642	Alpha-amylase domain
RG53_RS17685	SM00859	Semialdehyde dehydrogenase, NAD binding domain
RG53_RS17705	SM00354	helix_turn _helix lactose operon repressor
RG53_RS17760	SM00382	ATPases associated with a variety of cellular activities
RG53_RS17780	SM00382	ATPases associated with a variety of cellular activities
RG53_RS17785	SM00382	ATPases associated with a variety of cellular activities
RG53_RS17830	SM00382	ATPases associated with a variety of cellular activities
RG53_RS17835	SM00382	ATPases associated with a variety of cellular activities
RG53_RS17835	SM00962	SRP54-type protein, GTPase domain
RG53_RS17835	SM00963	SRP54-type protein, helical bundle domain
RG53_RS17910	SM00382	ATPases associated with a variety of cellular activities
RG53_RS17915	SM00382	ATPases associated with a variety of cellular activities
RG53_RS17940	SM00382	ATPases associated with a variety of cellular activities
RG53_RS18035	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RG53_RS18050	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RG53_RS18075	SM00421	helix_turn_helix, Lux Regulon
RG53_RS18125	SM00342	helix_turn_helix, arabinose operon control protein
RG53_RS18130	SM00342	helix_turn_helix, arabinose operon control protein
RG53_RS18140	SM01235	RG53_RS18140
RG53_RS18150	SM00421	helix_turn_helix, Lux Regulon
RG53_RS18175	SM00052	Putative diguanylate phosphodiesterase
RG53_RS18210	SM00052	Putative diguanylate phosphodiesterase
RG53_RS18210	SM00267	diguanylate cyclase
RG53_RS18215	SM00028	Tetratricopeptide repeats
RG53_RS18285	SM00382	ATPases associated with a variety of cellular activities
RG53_RS18290	SM00382	ATPases associated with a variety of cellular activities
RG53_RS18375	SM00530	Helix-turn-helix XRE-family like proteins 
RG53_RS18380	SM00357	Cold shock protein domain
RG53_RS18435	SM00382	ATPases associated with a variety of cellular activities
RG53_RS18445	SM00342	helix_turn_helix, arabinose operon control protein
RG53_RS18450	SM00047	Lysozyme subfamily 2
RG53_RS18455	SM00642	Alpha-amylase domain
RG53_RS18470	SM00346	helix_turn_helix isocitrate lyase regulation
RG53_RS18505	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
RG53_RS18515	SM01007	Class II Aldolase and Adducin N-terminal domain
RG53_RS18670	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RG53_RS18670	SM00895	RG53_RS18670
RG53_RS18685	SM00971	Serine acetyltransferase, N-terminal
RG53_RS18705	SM00450	Rhodanese Homology Domain
RG53_RS18735	SM00829	Enoylreductase
RG53_RS18815	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
RG53_RS18815	SM01232	RG53_RS18815
RG53_RS18880	SM00532	Ligase N family
RG53_RS18885	SM00072	Guanylate kinase homologues.
RG53_RS18890	SM01409	RG53_RS18890
RG53_RS18895	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RG53_RS18895	SM00954	Region found in RelA / SpoT proteins
RG53_RS18905	SM00487	DEAD-like helicases superfamily
RG53_RS18905	SM00490	helicase superfamily c-terminal domain
RG53_RS18950	SM00487	DEAD-like helicases superfamily
RG53_RS18950	SM00490	helicase superfamily c-terminal domain
RG53_RS19000	SM00493	RG53_RS19000
RG53_RS19000	SM00778	Zinc-binding domain of primase-helicase
RG53_RS19000	SM00885	D5 N terminal like
RG53_RS19080	SM00387	Histidine kinase-like ATPases
RG53_RS19085	SM00421	helix_turn_helix, Lux Regulon
RG53_RS19085	SM00448	cheY-homologous receiver domain
RG53_RS19165	SM00342	helix_turn_helix, arabinose operon control protein
RG53_RS19185	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RG53_RS19185	SM00866	RG53_RS19185
RG53_RS19230	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
RG53_RS19245	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RG53_RS19245	SM00895	RG53_RS19245
RG53_RS19265	SM00387	Histidine kinase-like ATPases
RG53_RS19265	SM00433	TopoisomeraseII
RG53_RS19275	SM00480	DNA polymerase III beta subunit
RG53_RS19280	SM00382	ATPases associated with a variety of cellular activities
RG53_RS19280	SM00760	Bacterial dnaA protein helix-turn-helix domain
RG53_RS19300	SM01234	RG53_RS19300
RG53_RS19395	SM01061	CAT RNA binding domain
RG53_RS19405	SM00382	ATPases associated with a variety of cellular activities
RG53_RS19465	SM00382	ATPases associated with a variety of cellular activities
RG53_RS19510	SM01228	RG53_RS19510
RG53_RS19520	SM00344	helix_turn_helix ASNC type
RG53_RS19530	SM00327	von Willebrand factor (vWF) type A domain
RG53_RS19535	SM00382	ATPases associated with a variety of cellular activities
RG53_RS19550	SM00382	ATPases associated with a variety of cellular activities
RG53_RS19570	SM00354	helix_turn _helix lactose operon repressor
RG53_RS19580	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RG53_RS19580	SM00895	RG53_RS19580
RG53_RS19630	SM00382	ATPases associated with a variety of cellular activities
RG53_RS19705	SM00487	DEAD-like helicases superfamily
RG53_RS19705	SM00490	helicase superfamily c-terminal domain
RG53_RS19720	SM00357	Cold shock protein domain
RG53_RS19720	SM00382	ATPases associated with a variety of cellular activities
RG53_RS19720	SM00959	Rho termination factor, N-terminal domain
RG53_RS19745	SM00984	UDP binding domain
RG53_RS19855	SM01219	RG53_RS19855
RG53_RS19965	SM00341	Helicase and RNase D C-terminal
RG53_RS19965	SM00487	DEAD-like helicases superfamily
RG53_RS19965	SM00490	helicase superfamily c-terminal domain
RG53_RS19965	SM00956	RG53_RS19965
RG53_RS20060	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
RG53_RS20155	SM00563	Phosphate acyltransferases
RG53_RS20165	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
RG53_RS20165	SM00474	3'-5' exonuclease
RG53_RS20165	SM00475	5'-3' exonuclease
RG53_RS20165	SM00482	DNA polymerase A domain
RG53_RS20185	SM00729	Elongator protein 3, MiaB family, Radical SAM
RG53_RS20195	SM00382	ATPases associated with a variety of cellular activities
RG53_RS20195	SM00448	cheY-homologous receiver domain
RG53_RS20200	SM00091	PAS domain
RG53_RS20200	SM00387	Histidine kinase-like ATPases
RG53_RS20200	SM00388	His Kinase A (phosphoacceptor) domain
RG53_RS20205	SM01230	RG53_RS20205
RG53_RS20220	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RG53_RS20220	SM00866	RG53_RS20220
RG53_RS20265	SM01133	RG53_RS20265
RG53_RS20280	SM00420	helix_turn_helix, Deoxyribose operon repressor
RG53_RS20280	SM01134	RG53_RS20280
RG53_RS20315	SM00530	Helix-turn-helix XRE-family like proteins 
RG53_RS20400	SM01007	Class II Aldolase and Adducin N-terminal domain
RG53_RS20420	SM00342	helix_turn_helix, arabinose operon control protein
RG53_RS20425	SM00342	helix_turn_helix, arabinose operon control protein
RG53_RS20460	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RG53_RS20460	SM00387	Histidine kinase-like ATPases
RG53_RS20460	SM00388	His Kinase A (phosphoacceptor) domain
RG53_RS20465	SM00448	cheY-homologous receiver domain
RG53_RS20465	SM00862	Transcriptional regulatory protein, C terminal
RG53_RS20560	SM00382	ATPases associated with a variety of cellular activities
RG53_RS20560	SM01086	C-terminal, D2-small domain, of ClpB protein
RG53_RS20575	SM00354	helix_turn _helix lactose operon repressor
RG53_RS20580	SM00487	DEAD-like helicases superfamily
RG53_RS20580	SM00490	helicase superfamily c-terminal domain
RG53_RS20715	SM00342	helix_turn_helix, arabinose operon control protein
RG53_RS20735	SM00859	Semialdehyde dehydrogenase, NAD binding domain
RG53_RS20750	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
RG53_RS20880	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
RG53_RS20880	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
RG53_RS20885	SM00649	Ribosomal protein L11/L12
RG53_RS20915	SM00663	RNA polymerase I subunit A N-terminus
RG53_RS20925	SM00876	Biotin and Thiamin Synthesis associated domain
RG53_RS20980	SM00411	bacterial (prokaryotic) histone like domain
RG53_RS21000	SM00387	Histidine kinase-like ATPases
RG53_RS21000	SM00388	His Kinase A (phosphoacceptor) domain
RG53_RS21005	SM00382	ATPases associated with a variety of cellular activities
RG53_RS21005	SM00448	cheY-homologous receiver domain
RG53_RS21010	SM01209	RG53_RS21010
RG53_RS21010	SM01210	RG53_RS21010
RG53_RS21015	SM00798	AICARFT/IMPCHase bienzyme
RG53_RS21015	SM00851	MGS-like domain
RG53_RS21085	SM00346	helix_turn_helix isocitrate lyase regulation
RG53_RS21090	SM01018	B12 binding domain
RG53_RS21105	SM00363	S4 RNA-binding domain
RG53_RS21115	SM00244	prohibitin homologues
RG53_RS21200	SM00382	ATPases associated with a variety of cellular activities
RG53_RS21240	SM00563	Phosphate acyltransferases
RG53_RS21290	SM00829	Enoylreductase
RG53_RS21295	SM00382	ATPases associated with a variety of cellular activities
RG53_RS21300	SM01005	Alanine racemase, C-terminal domain
RG53_RS21350	SM00052	Putative diguanylate phosphodiesterase
RG53_RS21355	SM00342	helix_turn_helix, arabinose operon control protein
RG53_RS21360	SM00422	helix_turn_helix, mercury resistance
RG53_RS21445	SM00028	Tetratricopeptide repeats
RG53_RS21460	SM00671	Sel1-like repeats.
RG53_RS21490	SM00849	Metallo-beta-lactamase superfamily
RG53_RS21515	SM00072	Guanylate kinase homologues.
RG53_RS21525	SM00382	ATPases associated with a variety of cellular activities
RG53_RS21535	SM00382	ATPases associated with a variety of cellular activities
RG53_RS21560	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RG53_RS21560	SM00866	RG53_RS21560
RG53_RS21575	SM00382	ATPases associated with a variety of cellular activities
RG53_RS21615	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RG53_RS21615	SM00387	Histidine kinase-like ATPases
RG53_RS21615	SM00388	His Kinase A (phosphoacceptor) domain
RG53_RS21620	SM00448	cheY-homologous receiver domain
RG53_RS21620	SM00862	Transcriptional regulatory protein, C terminal
RG53_RS21635	SM00342	helix_turn_helix, arabinose operon control protein
RG53_RS21645	SM00342	helix_turn_helix, arabinose operon control protein
RG53_RS21685	SM00448	cheY-homologous receiver domain
RG53_RS21690	SM00091	PAS domain
RG53_RS21690	SM00387	Histidine kinase-like ATPases
RG53_RS21740	SM00862	Transcriptional regulatory protein, C terminal
RG53_RS21795	SM00883	Chaperonin 10 Kd subunit
RG53_RS21820	SM00841	Elongation factor P, C-terminal
RG53_RS21820	SM01185	RG53_RS21820
RG53_RS21895	SM00479	RG53_RS21895
RG53_RS21930	SM00646	RG53_RS21930
RG53_RS21935	SM00853	MutL C terminal dimerisation domain
RG53_RS21935	SM01340	RG53_RS21935
RG53_RS21955	SM00244	prohibitin homologues
RG53_RS21960	SM00244	prohibitin homologues
RG53_RS21970	SM00788	Adenylosuccinate synthetase
RG53_RS21980	SM00316	Ribosomal protein S1-like RNA-binding domain
RG53_RS21980	SM00357	Cold shock protein domain
RG53_RS21980	SM00955	RG53_RS21980
RG53_RS21985	SM00967	RNA 2'-O ribose methyltransferase substrate binding
RG53_RS22040	SM00420	helix_turn_helix, Deoxyribose operon repressor
RG53_RS22040	SM01134	RG53_RS22040
RG53_RS22065	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
RG53_RS22075	SM01007	Class II Aldolase and Adducin N-terminal domain
RG53_RS22140	SM00882	Coenzyme A transferase
RG53_RS22225	SM01091	Transporter associated domain
RG53_RS22270	SM00382	ATPases associated with a variety of cellular activities
RG53_RS22325	SM00642	Alpha-amylase domain
RG53_RS22335	SM00354	helix_turn _helix lactose operon repressor
RG53_RS22340	SM00831	Cation transporter/ATPase, N-terminus
RG53_RS22380	SM00822	RG53_RS22380
RG53_RS22460	SM00829	Enoylreductase
RG53_RS22475	SM00220	Serine/Threonine protein kinases, catalytic domain
RG53_RS22530	SM00382	ATPases associated with a variety of cellular activities
RG53_RS22645	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RG53_RS22645	SM00895	RG53_RS22645
RG53_RS22740	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RG53_RS22755	SM00833	Cobalamin synthesis protein cobW C-terminal domain
RG53_RS22770	SM00903	Flavin reductase like domain
RG53_RS22780	SM00342	helix_turn_helix, arabinose operon control protein
RG53_RS22820	SM00347	helix_turn_helix multiple antibiotic resistance protein
RG53_RS22825	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RG53_RS22825	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RG53_RS22825	SM00319	Homologues of the ligand binding domain of Tar
RG53_RS22835	SM00895	RG53_RS22835
RG53_RS22840	SM00829	Enoylreductase
RG53_RS22855	SM00382	ATPases associated with a variety of cellular activities
RG53_RS22875	SM00421	helix_turn_helix, Lux Regulon
RG53_RS22880	SM00421	helix_turn_helix, Lux Regulon
RG53_RS22940	SM00749	bacterial OsmY and nodulation domain
RG53_RS22975	SM01133	RG53_RS22975
RG53_RS22980	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
RG53_RS23010	SM00382	ATPases associated with a variety of cellular activities
RG53_RS23015	SM00530	Helix-turn-helix XRE-family like proteins 
RG53_RS23025	SM00382	ATPases associated with a variety of cellular activities
RG53_RS23050	SM00855	Phosphoglycerate mutase family
RG53_RS23055	SM00342	helix_turn_helix, arabinose operon control protein
RG53_RS23055	SM00871	Bacterial transcription activator, effector binding domain
RG53_RS23065	SM00448	cheY-homologous receiver domain
RG53_RS23065	SM00862	Transcriptional regulatory protein, C terminal
RG53_RS23070	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RG53_RS23070	SM00387	Histidine kinase-like ATPases
RG53_RS23070	SM00388	His Kinase A (phosphoacceptor) domain
RG53_RS23080	SM00448	cheY-homologous receiver domain
RG53_RS23080	SM00862	Transcriptional regulatory protein, C terminal
RG53_RS23145	SM00852	Probable molybdopterin binding domain
RG53_RS23170	SM00271	DnaJ molecular chaperone homology domain
RG53_RS23220	SM00904	Riboflavin kinase
RG53_RS23255	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
RG53_RS23260	SM00851	MGS-like domain
RG53_RS23260	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
RG53_RS23305	SM00893	Electron transfer flavoprotein domain
RG53_RS23310	SM00893	Electron transfer flavoprotein domain
RG53_RS23355	SM00650	Ribosomal RNA adenine dimethylases
RG53_RS23375	SM00271	DnaJ molecular chaperone homology domain
RG53_RS23385	SM00487	DEAD-like helicases superfamily
RG53_RS23385	SM00490	helicase superfamily c-terminal domain
RG53_RS23390	SM00486	DNA polymerase type-B family
RG53_RS23395	SM01007	Class II Aldolase and Adducin N-terminal domain
RG53_RS23415	SM00342	helix_turn_helix, arabinose operon control protein
RG53_RS23425	SM00382	ATPases associated with a variety of cellular activities
RG53_RS23465	SM01329	RG53_RS23465
RG53_RS23470	SM00917	LeuA allosteric (dimerisation) domain
RG53_RS23500	SM00354	helix_turn _helix lactose operon repressor
RG53_RS23575	SM00842	Cell division protein FtsA
RG53_RS23580	SM00864	Tubulin/FtsZ family, GTPase domain
RG53_RS23580	SM00865	Tubulin/FtsZ family, C-terminal domain
RG53_RS23595	SM00957	SecA DEAD-like domain
RG53_RS23595	SM00958	SecA preprotein cross-linking domain
RG53_RS23620	SM01240	RG53_RS23620
RG53_RS23650	SM00644	RG53_RS23650
RG53_RS23665	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RG53_RS23665	SM00895	RG53_RS23665
RG53_RS23730	SM00564	beta-propeller repeat
RG53_RS23740	SM00947	Carbonic anhydrase
RG53_RS23745	SM00382	ATPases associated with a variety of cellular activities
RG53_RS23855	SM00487	DEAD-like helicases superfamily
RG53_RS23855	SM00490	helicase superfamily c-terminal domain
RG53_RS23855	SM00847	Helicase associated domain (HA2)  Add an annotation
RG53_RS23875	SM00382	ATPases associated with a variety of cellular activities
RG53_RS23920	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RG53_RS23930	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RG53_RS23950	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RG53_RS24005	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RG53_RS24015	SM00935	Outer membrane protein (OmpH-like)
RG53_RS24045	SM00481	DNA polymerase alpha chain like domain
RG53_RS24065	SM00977	TilS substrate C-terminal domain
RG53_RS24080	SM01322	RG53_RS24080
RG53_RS24125	SM00382	ATPases associated with a variety of cellular activities
RG53_RS24125	SM00930	RG53_RS24125
RG53_RS24180	SM00257	Lysin motif
RG53_RS24185	SM00849	Metallo-beta-lactamase superfamily
RG53_RS24200	SM00479	RG53_RS24200
RG53_RS24255	SM00382	ATPases associated with a variety of cellular activities
RG53_RS24255	SM01086	C-terminal, D2-small domain, of ClpB protein
RG53_RS24655	SM00634	Bacterial Ig-like domain (group 1)
RG53_RS24860	SM00052	Putative diguanylate phosphodiesterase
