RG48_RS00050 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. RG48_RS00145 SM00341 Helicase and RNase D C-terminal RG48_RS00145 SM00487 DEAD-like helicases superfamily RG48_RS00145 SM00490 helicase superfamily c-terminal domain RG48_RS00145 SM00956 RG48_RS00145 RG48_RS00225 SM01219 RG48_RS00225 RG48_RS00335 SM00984 UDP binding domain RG48_RS00360 SM00357 Cold shock protein domain RG48_RS00360 SM00382 ATPases associated with a variety of cellular activities RG48_RS00360 SM00959 Rho termination factor, N-terminal domain RG48_RS00375 SM00487 DEAD-like helicases superfamily RG48_RS00375 SM00490 helicase superfamily c-terminal domain RG48_RS00450 SM00382 ATPases associated with a variety of cellular activities RG48_RS00495 SM00345 helix_turn_helix gluconate operon transcriptional repressor RG48_RS00495 SM00895 RG48_RS00495 RG48_RS00505 SM00354 helix_turn _helix lactose operon repressor RG48_RS00525 SM00382 ATPases associated with a variety of cellular activities RG48_RS00540 SM00382 ATPases associated with a variety of cellular activities RG48_RS00545 SM00327 von Willebrand factor (vWF) type A domain RG48_RS00555 SM00344 helix_turn_helix ASNC type RG48_RS00565 SM01228 RG48_RS00565 RG48_RS00610 SM00382 ATPases associated with a variety of cellular activities RG48_RS00650 SM00382 ATPases associated with a variety of cellular activities RG48_RS00660 SM01061 CAT RNA binding domain RG48_RS00755 SM01234 RG48_RS00755 RG48_RS00775 SM00382 ATPases associated with a variety of cellular activities RG48_RS00775 SM00760 Bacterial dnaA protein helix-turn-helix domain RG48_RS00780 SM00480 DNA polymerase III beta subunit RG48_RS00790 SM00387 Histidine kinase-like ATPases RG48_RS00790 SM00433 TopoisomeraseII RG48_RS00810 SM00345 helix_turn_helix gluconate operon transcriptional repressor RG48_RS00810 SM00895 RG48_RS00810 RG48_RS00825 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RG48_RS00885 SM00342 helix_turn_helix, arabinose operon control protein RG48_RS00965 SM00421 helix_turn_helix, Lux Regulon RG48_RS00965 SM00448 cheY-homologous receiver domain RG48_RS00970 SM00387 Histidine kinase-like ATPases RG48_RS01165 SM00382 ATPases associated with a variety of cellular activities RG48_RS01165 SM01086 C-terminal, D2-small domain, of ClpB protein RG48_RS01175 SM00382 ATPases associated with a variety of cellular activities RG48_RS01225 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RG48_RS01280 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RG48_RS01325 SM00487 DEAD-like helicases superfamily RG48_RS01325 SM00490 helicase superfamily c-terminal domain RG48_RS01335 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RG48_RS01335 SM00954 Region found in RelA / SpoT proteins RG48_RS01340 SM01409 RG48_RS01340 RG48_RS01345 SM00072 Guanylate kinase homologues. RG48_RS01350 SM00532 Ligase N family RG48_RS01415 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain RG48_RS01415 SM01232 RG48_RS01415 RG48_RS01500 SM00829 Enoylreductase RG48_RS01530 SM00450 Rhodanese Homology Domain RG48_RS01550 SM00971 Serine acetyltransferase, N-terminal RG48_RS01565 SM00345 helix_turn_helix gluconate operon transcriptional repressor RG48_RS01565 SM00895 RG48_RS01565 RG48_RS01715 SM01007 Class II Aldolase and Adducin N-terminal domain RG48_RS01725 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family RG48_RS01755 SM00346 helix_turn_helix isocitrate lyase regulation RG48_RS01770 SM00642 Alpha-amylase domain RG48_RS01775 SM00047 Lysozyme subfamily 2 RG48_RS01790 SM00382 ATPases associated with a variety of cellular activities RG48_RS01855 SM00357 Cold shock protein domain RG48_RS01860 SM00530 Helix-turn-helix XRE-family like proteins RG48_RS01950 SM00382 ATPases associated with a variety of cellular activities RG48_RS01955 SM00382 ATPases associated with a variety of cellular activities RG48_RS02020 SM00028 Tetratricopeptide repeats RG48_RS02025 SM00052 Putative diguanylate phosphodiesterase RG48_RS02025 SM00267 diguanylate cyclase RG48_RS02060 SM00052 Putative diguanylate phosphodiesterase RG48_RS02085 SM00421 helix_turn_helix, Lux Regulon RG48_RS02095 SM01235 RG48_RS02095 RG48_RS02105 SM00342 helix_turn_helix, arabinose operon control protein RG48_RS02110 SM00342 helix_turn_helix, arabinose operon control protein RG48_RS02160 SM00421 helix_turn_helix, Lux Regulon RG48_RS02190 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RG48_RS02290 SM00382 ATPases associated with a variety of cellular activities RG48_RS02325 SM00382 ATPases associated with a variety of cellular activities RG48_RS02330 SM00382 ATPases associated with a variety of cellular activities RG48_RS02405 SM00382 ATPases associated with a variety of cellular activities RG48_RS02405 SM00962 SRP54-type protein, GTPase domain RG48_RS02405 SM00963 SRP54-type protein, helical bundle domain RG48_RS02410 SM00382 ATPases associated with a variety of cellular activities RG48_RS02455 SM00382 ATPases associated with a variety of cellular activities RG48_RS02460 SM00382 ATPases associated with a variety of cellular activities RG48_RS02485 SM00382 ATPases associated with a variety of cellular activities RG48_RS02540 SM00354 helix_turn _helix lactose operon repressor RG48_RS02560 SM00859 Semialdehyde dehydrogenase, NAD binding domain RG48_RS02565 SM00642 Alpha-amylase domain RG48_RS02570 SM00642 Alpha-amylase domain RG48_RS02615 SM00450 Rhodanese Homology Domain RG48_RS02625 SM00420 helix_turn_helix, Deoxyribose operon repressor RG48_RS02625 SM01134 RG48_RS02625 RG48_RS02630 SM00382 ATPases associated with a variety of cellular activities RG48_RS02645 SM00421 helix_turn_helix, Lux Regulon RG48_RS02700 SM00899 RG48_RS02700 RG48_RS02710 SM00316 Ribosomal protein S1-like RNA-binding domain RG48_RS02710 SM00732 Likely ribonuclease with RNase H fold. RG48_RS02725 SM00448 cheY-homologous receiver domain RG48_RS02725 SM00862 Transcriptional regulatory protein, C terminal RG48_RS02730 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RG48_RS02730 SM00387 Histidine kinase-like ATPases RG48_RS02730 SM00388 His Kinase A (phosphoacceptor) domain RG48_RS02755 SM00363 S4 RNA-binding domain RG48_RS02800 SM00965 Secretin and TonB N terminus short domain RG48_RS02885 SM00345 helix_turn_helix gluconate operon transcriptional repressor RG48_RS02885 SM00866 RG48_RS02885 RG48_RS02980 SM00100 Cyclic nucleotide-monophosphate binding domain RG48_RS02980 SM00419 helix_turn_helix, cAMP Regulatory protein RG48_RS03010 SM00382 ATPases associated with a variety of cellular activities RG48_RS03075 SM00838 Elongation factor G C-terminus RG48_RS03075 SM00889 Elongation factor G, domain IV RG48_RS03085 SM00495 Chitin-binding domain type 3 RG48_RS03140 SM00382 ATPases associated with a variety of cellular activities RG48_RS03165 SM01403 RG48_RS03165 RG48_RS03185 SM01382 RG48_RS03185 RG48_RS03185 SM01383 RG48_RS03185 RG48_RS03200 SM00322 K homology RNA-binding domain RG48_RS03220 SM01374 RG48_RS03220 RG48_RS03225 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. RG48_RS03290 SM00363 S4 RNA-binding domain RG48_RS03290 SM01390 RG48_RS03290 RG48_RS03295 SM00662 RNA polymerases D RG48_RS03310 SM00422 helix_turn_helix, mercury resistance RG48_RS03410 SM00382 ATPases associated with a variety of cellular activities RG48_RS03425 SM00062 Bacterial periplasmic substrate-binding proteins RG48_RS03490 SM00878 Biotin carboxylase C-terminal domain RG48_RS03510 SM00829 Enoylreductase RG48_RS03515 SM00052 Putative diguanylate phosphodiesterase RG48_RS03515 SM00267 diguanylate cyclase RG48_RS03550 SM00316 Ribosomal protein S1-like RNA-binding domain RG48_RS03615 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RG48_RS03620 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RG48_RS03660 SM00345 helix_turn_helix gluconate operon transcriptional repressor RG48_RS03660 SM00895 RG48_RS03660 RG48_RS03665 SM01130 RG48_RS03665 RG48_RS03720 SM00729 Elongator protein 3, MiaB family, Radical SAM RG48_RS03725 SM00073 Histidine Phosphotransfer domain RG48_RS03725 SM00091 PAS domain RG48_RS03725 SM00387 Histidine kinase-like ATPases RG48_RS03725 SM00388 His Kinase A (phosphoacceptor) domain RG48_RS03725 SM00448 cheY-homologous receiver domain RG48_RS03770 SM00382 ATPases associated with a variety of cellular activities RG48_RS03800 SM00382 ATPases associated with a variety of cellular activities RG48_RS03875 SM01103 RG48_RS03875 RG48_RS03885 SM00382 ATPases associated with a variety of cellular activities RG48_RS03935 SM00316 Ribosomal protein S1-like RNA-binding domain RG48_RS03955 SM01387 RG48_RS03955 RG48_RS03960 SM00316 Ribosomal protein S1-like RNA-binding domain RG48_RS03960 SM00322 K homology RNA-binding domain RG48_RS03965 SM00028 Tetratricopeptide repeats RG48_RS03975 SM00487 DEAD-like helicases superfamily RG48_RS03975 SM00490 helicase superfamily c-terminal domain RG48_RS04015 SM00465 GIY-YIG type nucleases (URI domain) RG48_RS04030 SM00859 Semialdehyde dehydrogenase, NAD binding domain RG48_RS04040 SM00749 bacterial OsmY and nodulation domain RG48_RS04150 SM00420 helix_turn_helix, Deoxyribose operon repressor RG48_RS04150 SM01134 RG48_RS04150 RG48_RS04165 SM00858 RG48_RS04165 RG48_RS04330 SM00345 helix_turn_helix gluconate operon transcriptional repressor RG48_RS04330 SM00895 RG48_RS04330 RG48_RS04365 SM00858 RG48_RS04365 RG48_RS04415 SM00530 Helix-turn-helix XRE-family like proteins RG48_RS04445 SM01038 Beta galactosidase small chain RG48_RS04450 SM00354 helix_turn _helix lactose operon repressor RG48_RS04475 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RG48_RS04475 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RG48_RS04515 SM00400 zinc finger RG48_RS04515 SM00493 RG48_RS04515 RG48_RS04515 SM00766 DNA primase DnaG DnaB-binding RG48_RS04560 SM01207 RG48_RS04560 RG48_RS04565 SM00905 Dihydroneopterin aldolase RG48_RS04580 SM00287 Bacterial SH3 domain homologues RG48_RS04590 SM01118 RG48_RS04590 RG48_RS04615 SM00244 prohibitin homologues RG48_RS04715 SM00387 Histidine kinase-like ATPases RG48_RS04715 SM00433 TopoisomeraseII RG48_RS04735 SM00387 Histidine kinase-like ATPases RG48_RS04735 SM00388 His Kinase A (phosphoacceptor) domain RG48_RS04740 SM00448 cheY-homologous receiver domain RG48_RS04740 SM00862 Transcriptional regulatory protein, C terminal RG48_RS04750 SM00871 Bacterial transcription activator, effector binding domain RG48_RS04760 SM00530 Helix-turn-helix XRE-family like proteins RG48_RS04770 SM00434 DNA Topoisomerase IV RG48_RS04780 SM00563 Phosphate acyltransferases RG48_RS04790 SM00729 Elongator protein 3, MiaB family, Radical SAM RG48_RS04820 SM00342 helix_turn_helix, arabinose operon control protein RG48_RS05020 SM00345 helix_turn_helix gluconate operon transcriptional repressor RG48_RS05020 SM00895 RG48_RS05020 RG48_RS05130 SM00478 endonuclease III RG48_RS05130 SM00525 RG48_RS05130 RG48_RS05155 SM00870 RG48_RS05155 RG48_RS05165 SM00729 Elongator protein 3, MiaB family, Radical SAM RG48_RS05175 SM01152 RG48_RS05175 RG48_RS05190 SM00382 ATPases associated with a variety of cellular activities RG48_RS05195 SM00732 Likely ribonuclease with RNase H fold. RG48_RS05220 SM00731 SprT homologues. RG48_RS05270 SM00861 Transketolase, pyrimidine binding domain RG48_RS05310 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RG48_RS05420 SM01011 Aminopeptidase P, N-terminal domain RG48_RS05455 SM01022 RG48_RS05455 RG48_RS05555 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RG48_RS05560 SM01092 CO dehydrogenase flavoprotein C-terminal domain RG48_RS05620 SM00091 PAS domain RG48_RS05620 SM00382 ATPases associated with a variety of cellular activities RG48_RS05630 SM01092 CO dehydrogenase flavoprotein C-terminal domain RG48_RS05635 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RG48_RS05645 SM00257 Lysin motif RG48_RS05695 SM00421 helix_turn_helix, Lux Regulon RG48_RS05735 SM00421 helix_turn_helix, Lux Regulon RG48_RS05750 SM00028 Tetratricopeptide repeats RG48_RS05750 SM00862 Transcriptional regulatory protein, C terminal RG48_RS05785 SM00862 Transcriptional regulatory protein, C terminal RG48_RS05835 SM00354 helix_turn _helix lactose operon repressor RG48_RS05845 SM00563 Phosphate acyltransferases RG48_RS05870 SM00927 DNA mismatch repair enzyme MutH RG48_RS05890 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RG48_RS05940 SM00382 ATPases associated with a variety of cellular activities RG48_RS05950 SM00646 RG48_RS05950 RG48_RS05975 SM00925 MltA specific insert domain RG48_RS06015 SM00420 helix_turn_helix, Deoxyribose operon repressor RG48_RS06015 SM01134 RG48_RS06015 RG48_RS06040 SM01007 Class II Aldolase and Adducin N-terminal domain RG48_RS06050 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs RG48_RS06050 SM00475 5'-3' exonuclease RG48_RS06105 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RG48_RS06110 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RG48_RS06115 SM00073 Histidine Phosphotransfer domain RG48_RS06115 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RG48_RS06115 SM00387 Histidine kinase-like ATPases RG48_RS06115 SM00388 His Kinase A (phosphoacceptor) domain RG48_RS06115 SM00448 cheY-homologous receiver domain RG48_RS06125 SM00954 Region found in RelA / SpoT proteins RG48_RS06130 SM00966 SpoVT / AbrB like domain RG48_RS06150 SM01192 RG48_RS06150 RG48_RS06150 SM01193 RG48_RS06150 RG48_RS06195 SM00893 Electron transfer flavoprotein domain RG48_RS06240 SM00487 DEAD-like helicases superfamily RG48_RS06240 SM00490 helicase superfamily c-terminal domain RG48_RS06265 SM01101 RG48_RS06265 RG48_RS06335 SM00257 Lysin motif RG48_RS06355 SM01007 Class II Aldolase and Adducin N-terminal domain RG48_RS06370 SM00420 helix_turn_helix, Deoxyribose operon repressor RG48_RS06370 SM01134 RG48_RS06370 RG48_RS06380 SM00533 DNA-binding domain of DNA mismatch repair MUTS family RG48_RS06380 SM00534 ATPase domain of DNA mismatch repair MUTS family RG48_RS06395 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RG48_RS06395 SM00382 ATPases associated with a variety of cellular activities RG48_RS06485 SM00354 helix_turn _helix lactose operon repressor RG48_RS06510 SM00849 Metallo-beta-lactamase superfamily RG48_RS06515 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RG48_RS06515 SM00382 ATPases associated with a variety of cellular activities RG48_RS06525 SM00420 helix_turn_helix, Deoxyribose operon repressor RG48_RS06525 SM01134 RG48_RS06525 RG48_RS06565 SM00382 ATPases associated with a variety of cellular activities RG48_RS06580 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain RG48_RS06645 SM00347 helix_turn_helix multiple antibiotic resistance protein RG48_RS06675 SM00382 ATPases associated with a variety of cellular activities RG48_RS06715 SM00528 Domain in histone-like proteins of HNS family RG48_RS06720 SM00450 Rhodanese Homology Domain RG48_RS06725 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RG48_RS06735 SM00257 Lysin motif RG48_RS06735 SM00749 bacterial OsmY and nodulation domain RG48_RS06740 SM00345 helix_turn_helix gluconate operon transcriptional repressor RG48_RS06740 SM00895 RG48_RS06740 RG48_RS06810 SM00869 Autotransporter beta-domain RG48_RS06915 SM00470 ParB-like nuclease domain RG48_RS06920 SM00470 ParB-like nuclease domain RG48_RS06925 SM00857 Resolvase, N terminal domain RG48_RS06980 SM01091 Transporter associated domain RG48_RS06990 SM00382 ATPases associated with a variety of cellular activities RG48_RS06990 SM00962 SRP54-type protein, GTPase domain RG48_RS06990 SM00963 SRP54-type protein, helical bundle domain RG48_RS07020 SM00267 diguanylate cyclase RG48_RS07040 SM00830 Chorismate mutase type II RG48_RS07045 SM00830 Chorismate mutase type II RG48_RS07065 SM00363 S4 RNA-binding domain RG48_RS07075 SM00382 ATPases associated with a variety of cellular activities RG48_RS07075 SM01086 C-terminal, D2-small domain, of ClpB protein RG48_RS07115 SM00155 Phospholipase D. Active site motifs. RG48_RS07120 SM00881 CoA binding domain RG48_RS07125 SM01144 RG48_RS07125 RG48_RS07135 SM00967 RNA 2'-O ribose methyltransferase substrate binding RG48_RS07140 SM00986 Uracil DNA glycosylase superfamily RG48_RS07140 SM00987 UreE urease accessory protein, C-terminal domain RG48_RS07160 SM00487 DEAD-like helicases superfamily RG48_RS07160 SM00490 helicase superfamily c-terminal domain RG48_RS07215 SM00358 Double-stranded RNA binding motif RG48_RS07215 SM00535 Ribonuclease III family RG48_RS07275 SM00062 Bacterial periplasmic substrate-binding proteins RG48_RS07285 SM01211 RG48_RS07285 RG48_RS07290 SM00387 Histidine kinase-like ATPases RG48_RS07290 SM00388 His Kinase A (phosphoacceptor) domain RG48_RS07300 SM00382 ATPases associated with a variety of cellular activities RG48_RS07300 SM00448 cheY-homologous receiver domain RG48_RS07305 SM00938 Nitrogen regulatory protein P-II RG48_RS07330 SM00028 Tetratricopeptide repeats RG48_RS07340 SM00382 ATPases associated with a variety of cellular activities RG48_RS07350 SM00829 Enoylreductase RG48_RS07440 SM00271 DnaJ molecular chaperone homology domain RG48_RS07470 SM00450 Rhodanese Homology Domain RG48_RS07475 SM01359 RG48_RS07475 RG48_RS07475 SM01360 RG48_RS07475 RG48_RS07485 SM00562 RG48_RS07485 RG48_RS07495 SM00530 Helix-turn-helix XRE-family like proteins RG48_RS07515 SM00564 beta-propeller repeat RG48_RS07535 SM00116 Domain in cystathionine beta-synthase and other proteins. RG48_RS07535 SM01240 RG48_RS07535 RG48_RS07570 SM00052 Putative diguanylate phosphodiesterase RG48_RS07570 SM00267 diguanylate cyclase RG48_RS07635 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RG48_RS07635 SM00382 ATPases associated with a variety of cellular activities RG48_RS07710 SM01130 RG48_RS07710 RG48_RS07770 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RG48_RS07770 SM00387 Histidine kinase-like ATPases RG48_RS07790 SM00861 Transketolase, pyrimidine binding domain RG48_RS07800 SM00919 Malic enzyme, NAD binding domain RG48_RS07800 SM01274 RG48_RS07800 RG48_RS07805 SM00877 RG48_RS07805 RG48_RS07830 SM00877 RG48_RS07830 RG48_RS07875 SM00877 RG48_RS07875 RG48_RS07880 SM00877 RG48_RS07880 RG48_RS07885 SM00342 helix_turn_helix, arabinose operon control protein RG48_RS07895 SM00646 RG48_RS07895 RG48_RS07940 SM00822 RG48_RS07940 RG48_RS07960 SM00382 ATPases associated with a variety of cellular activities RG48_RS07970 SM00773 Proposed nucleic acid binding domain RG48_RS08015 SM00771 ZipA, C-terminal domain (FtsZ-binding) RG48_RS08020 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RG48_RS08020 SM00292 breast cancer carboxy-terminal domain RG48_RS08020 SM00532 Ligase N family RG48_RS08095 SM00052 Putative diguanylate phosphodiesterase RG48_RS08095 SM00267 diguanylate cyclase RG48_RS08155 SM00342 helix_turn_helix, arabinose operon control protein RG48_RS08160 SM00448 cheY-homologous receiver domain RG48_RS08160 SM00850 LytTr DNA-binding domain RG48_RS08165 SM00387 Histidine kinase-like ATPases RG48_RS08225 SM00062 Bacterial periplasmic substrate-binding proteins RG48_RS08225 SM00073 Histidine Phosphotransfer domain RG48_RS08225 SM00387 Histidine kinase-like ATPases RG48_RS08225 SM00388 His Kinase A (phosphoacceptor) domain RG48_RS08225 SM00448 cheY-homologous receiver domain RG48_RS08230 SM00421 helix_turn_helix, Lux Regulon RG48_RS08230 SM00448 cheY-homologous receiver domain RG48_RS08360 SM00530 Helix-turn-helix XRE-family like proteins RG48_RS08365 SM00530 Helix-turn-helix XRE-family like proteins RG48_RS08380 SM00382 ATPases associated with a variety of cellular activities RG48_RS08670 SM00463 Small MutS-related domain RG48_RS08710 SM00825 Beta-ketoacyl synthase RG48_RS08735 SM00859 Semialdehyde dehydrogenase, NAD binding domain RG48_RS08785 SM00062 Bacterial periplasmic substrate-binding proteins RG48_RS08790 SM00062 Bacterial periplasmic substrate-binding proteins RG48_RS08805 SM00382 ATPases associated with a variety of cellular activities RG48_RS08820 SM00905 Dihydroneopterin aldolase RG48_RS08885 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RG48_RS08925 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RG48_RS08930 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RG48_RS08930 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RG48_RS09040 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RG48_RS09105 SM00852 Probable molybdopterin binding domain RG48_RS09110 SM00346 helix_turn_helix isocitrate lyase regulation RG48_RS09115 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RG48_RS09200 SM00869 Autotransporter beta-domain RG48_RS09210 SM00434 DNA Topoisomerase IV RG48_RS09225 SM01359 RG48_RS09225 RG48_RS09225 SM01360 RG48_RS09225 RG48_RS09250 SM00882 Coenzyme A transferase RG48_RS09255 SM00882 Coenzyme A transferase RG48_RS09260 SM00382 ATPases associated with a variety of cellular activities RG48_RS09260 SM00448 cheY-homologous receiver domain RG48_RS09265 SM00091 PAS domain RG48_RS09265 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RG48_RS09265 SM00387 Histidine kinase-like ATPases RG48_RS09265 SM00388 His Kinase A (phosphoacceptor) domain RG48_RS09270 SM00387 Histidine kinase-like ATPases RG48_RS09270 SM00388 His Kinase A (phosphoacceptor) domain RG48_RS09270 SM00448 cheY-homologous receiver domain RG48_RS09280 SM00421 helix_turn_helix, Lux Regulon RG48_RS09280 SM00448 cheY-homologous receiver domain RG48_RS09285 SM00387 Histidine kinase-like ATPases RG48_RS09310 SM00342 helix_turn_helix, arabinose operon control protein RG48_RS09320 SM00382 ATPases associated with a variety of cellular activities RG48_RS09360 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RG48_RS09385 SM00382 ATPases associated with a variety of cellular activities RG48_RS09425 SM00421 helix_turn_helix, Lux Regulon RG48_RS09425 SM00448 cheY-homologous receiver domain RG48_RS09435 SM00869 Autotransporter beta-domain RG48_RS09465 SM00487 DEAD-like helicases superfamily RG48_RS09465 SM00490 helicase superfamily c-terminal domain RG48_RS09475 SM00363 S4 RNA-binding domain RG48_RS09495 SM00382 ATPases associated with a variety of cellular activities RG48_RS09515 SM00052 Putative diguanylate phosphodiesterase RG48_RS09525 SM00014 Acid phosphatase homologues RG48_RS09530 SM00833 Cobalamin synthesis protein cobW C-terminal domain RG48_RS09540 SM00841 Elongation factor P, C-terminal RG48_RS09540 SM01185 RG48_RS09540 RG48_RS09585 SM00100 Cyclic nucleotide-monophosphate binding domain RG48_RS09605 SM00518 AP endonuclease family 2 RG48_RS09660 SM00354 helix_turn _helix lactose operon repressor RG48_RS09670 SM00382 ATPases associated with a variety of cellular activities RG48_RS09760 SM01217 RG48_RS09760 RG48_RS09775 SM00382 ATPases associated with a variety of cellular activities RG48_RS09790 SM00422 helix_turn_helix, mercury resistance RG48_RS09795 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RG48_RS09800 SM00448 cheY-homologous receiver domain RG48_RS09800 SM00850 LytTr DNA-binding domain RG48_RS09820 SM00327 von Willebrand factor (vWF) type A domain RG48_RS09830 SM00382 ATPases associated with a variety of cellular activities RG48_RS09845 SM00773 Proposed nucleic acid binding domain RG48_RS09910 SM00507 HNH nucleases RG48_RS09955 SM00641 Glycosyl hydrolases family 25 RG48_RS09960 SM00345 helix_turn_helix gluconate operon transcriptional repressor RG48_RS09960 SM00866 RG48_RS09960 RG48_RS09980 SM01133 RG48_RS09980 RG48_RS10010 SM00829 Enoylreductase RG48_RS10015 SM00420 helix_turn_helix, Deoxyribose operon repressor RG48_RS10015 SM01134 RG48_RS10015 RG48_RS10020 SM00046 Diacylglycerol kinase catalytic domain (presumed) RG48_RS10040 SM00530 Helix-turn-helix XRE-family like proteins RG48_RS10130 SM00448 cheY-homologous receiver domain RG48_RS10130 SM00862 Transcriptional regulatory protein, C terminal RG48_RS10135 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RG48_RS10135 SM00387 Histidine kinase-like ATPases RG48_RS10135 SM00388 His Kinase A (phosphoacceptor) domain RG48_RS10170 SM00327 von Willebrand factor (vWF) type A domain RG48_RS10190 SM00478 endonuclease III RG48_RS10190 SM01009 AlkA N-terminal domain RG48_RS10195 SM00052 Putative diguanylate phosphodiesterase RG48_RS10195 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RG48_RS10195 SM00091 PAS domain RG48_RS10195 SM00267 diguanylate cyclase RG48_RS10215 SM00116 Domain in cystathionine beta-synthase and other proteins. RG48_RS10215 SM01091 Transporter associated domain RG48_RS10225 SM00226 Low molecular weight phosphatase family RG48_RS10395 SM01350 RG48_RS10395 RG48_RS10400 SM00984 UDP binding domain RG48_RS10490 SM00479 RG48_RS10490 RG48_RS10495 SM00936 Penicillin-binding protein 5, C-terminal domain RG48_RS10500 SM00871 Bacterial transcription activator, effector binding domain RG48_RS10570 SM00420 helix_turn_helix, Deoxyribose operon repressor RG48_RS10570 SM01134 RG48_RS10570 RG48_RS10780 SM00095 Transthyretin RG48_RS10785 SM00448 cheY-homologous receiver domain RG48_RS10785 SM00862 Transcriptional regulatory protein, C terminal RG48_RS10790 SM00387 Histidine kinase-like ATPases RG48_RS10790 SM00388 His Kinase A (phosphoacceptor) domain RG48_RS10820 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RG48_RS10855 SM00267 diguanylate cyclase RG48_RS10880 SM00421 helix_turn_helix, Lux Regulon RG48_RS10930 SM00382 ATPases associated with a variety of cellular activities RG48_RS10995 SM00642 Alpha-amylase domain RG48_RS11035 SM00062 Bacterial periplasmic substrate-binding proteins RG48_RS11035 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. RG48_RS11050 SM00382 ATPases associated with a variety of cellular activities RG48_RS11055 SM00421 helix_turn_helix, Lux Regulon RG48_RS11070 SM00421 helix_turn_helix, Lux Regulon RG48_RS11070 SM00448 cheY-homologous receiver domain RG48_RS11075 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RG48_RS11075 SM00465 GIY-YIG type nucleases (URI domain) RG48_RS11155 SM00382 ATPases associated with a variety of cellular activities RG48_RS11200 SM00073 Histidine Phosphotransfer domain RG48_RS11200 SM00260 Two component signalling adaptor domain RG48_RS11200 SM00387 Histidine kinase-like ATPases RG48_RS11200 SM01231 RG48_RS11200 RG48_RS11205 SM00260 Two component signalling adaptor domain RG48_RS11210 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RG48_RS11210 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RG48_RS11210 SM00319 Homologues of the ligand binding domain of Tar RG48_RS11215 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RG48_RS11215 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RG48_RS11215 SM00319 Homologues of the ligand binding domain of Tar RG48_RS11220 SM00138 Methyltransferase, chemotaxis proteins RG48_RS11225 SM00448 cheY-homologous receiver domain RG48_RS11230 SM00448 cheY-homologous receiver domain RG48_RS11260 SM00836 DALR anticodon binding domain RG48_RS11260 SM01016 Arginyl tRNA synthetase N terminal dom RG48_RS11345 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RG48_RS11350 SM00382 ATPases associated with a variety of cellular activities RG48_RS11360 SM00382 ATPases associated with a variety of cellular activities RG48_RS11370 SM00257 Lysin motif RG48_RS11455 SM00479 RG48_RS11455 RG48_RS11520 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RG48_RS11525 SM00945 ProQ/FINO family RG48_RS11530 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RG48_RS11530 SM00245 tail specific protease RG48_RS11545 SM00346 helix_turn_helix isocitrate lyase regulation RG48_RS11575 SM00357 Cold shock protein domain RG48_RS11625 SM01091 Transporter associated domain RG48_RS11630 SM00052 Putative diguanylate phosphodiesterase RG48_RS11675 SM00487 DEAD-like helicases superfamily RG48_RS11675 SM00491 RG48_RS11675 RG48_RS11695 SM00341 Helicase and RNase D C-terminal RG48_RS11695 SM00474 3'-5' exonuclease RG48_RS11715 SM01329 RG48_RS11715 RG48_RS11755 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RG48_RS11755 SM00267 diguanylate cyclase RG48_RS11775 SM00342 helix_turn_helix, arabinose operon control protein RG48_RS11795 SM00267 diguanylate cyclase RG48_RS11800 SM00267 diguanylate cyclase RG48_RS11810 SM00763 PrkA AAA domain RG48_RS11830 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RG48_RS11855 SM00829 Enoylreductase RG48_RS11875 SM00420 helix_turn_helix, Deoxyribose operon repressor RG48_RS11875 SM01134 RG48_RS11875 RG48_RS11890 SM00870 RG48_RS11890 RG48_RS11915 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain RG48_RS11915 SM00437 Bacterial DNA topoisomerase I DNA-binding domain RG48_RS11915 SM00493 RG48_RS11915 RG48_RS11925 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RG48_RS11945 SM00450 Rhodanese Homology Domain RG48_RS11950 SM00382 ATPases associated with a variety of cellular activities RG48_RS12030 SM00465 GIY-YIG type nucleases (URI domain) RG48_RS12065 SM00342 helix_turn_helix, arabinose operon control protein RG48_RS12085 SM01060 RG48_RS12085 RG48_RS12165 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain RG48_RS12200 SM00873 B3/4 domain RG48_RS12200 SM00874 tRNA synthetase B5 domain RG48_RS12200 SM00896 Ferredoxin-fold anticodon binding domain RG48_RS12205 SM00411 bacterial (prokaryotic) histone like domain RG48_RS12220 SM00382 ATPases associated with a variety of cellular activities RG48_RS12275 SM00893 Electron transfer flavoprotein domain RG48_RS12280 SM00893 Electron transfer flavoprotein domain RG48_RS12290 SM00342 helix_turn_helix, arabinose operon control protein RG48_RS12300 SM00882 Coenzyme A transferase RG48_RS12370 SM00382 ATPases associated with a variety of cellular activities RG48_RS12390 SM00257 Lysin motif RG48_RS12415 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain RG48_RS12490 SM00354 helix_turn _helix lactose operon repressor RG48_RS12525 SM00382 ATPases associated with a variety of cellular activities RG48_RS12525 SM00487 DEAD-like helicases superfamily RG48_RS12525 SM00490 helicase superfamily c-terminal domain RG48_RS12530 SM00479 RG48_RS12530 RG48_RS12580 SM00347 helix_turn_helix multiple antibiotic resistance protein RG48_RS12605 SM00363 S4 RNA-binding domain RG48_RS12630 SM00478 endonuclease III RG48_RS12630 SM00525 RG48_RS12630 RG48_RS12640 SM00900 RG48_RS12640 RG48_RS12705 SM00354 helix_turn _helix lactose operon repressor RG48_RS12760 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RG48_RS12760 SM00387 Histidine kinase-like ATPases RG48_RS12760 SM00388 His Kinase A (phosphoacceptor) domain RG48_RS12765 SM00448 cheY-homologous receiver domain RG48_RS12765 SM00862 Transcriptional regulatory protein, C terminal RG48_RS12795 SM01002 Alanine dehydrogenase/PNT, C-terminal domain RG48_RS12795 SM01003 Alanine dehydrogenase/PNT, N-terminal domain RG48_RS12880 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RG48_RS12885 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RG48_RS12920 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RG48_RS13000 SM00507 HNH nucleases RG48_RS13015 SM00357 Cold shock protein domain RG48_RS13040 SM00357 Cold shock protein domain RG48_RS13105 SM00857 Resolvase, N terminal domain RG48_RS13130 SM00345 helix_turn_helix gluconate operon transcriptional repressor RG48_RS13130 SM00895 RG48_RS13130 RG48_RS13155 SM00267 diguanylate cyclase RG48_RS13180 SM00342 helix_turn_helix, arabinose operon control protein RG48_RS13185 SM00347 helix_turn_helix multiple antibiotic resistance protein RG48_RS13225 SM00267 diguanylate cyclase RG48_RS13260 SM01133 RG48_RS13260 RG48_RS13280 SM00382 ATPases associated with a variety of cellular activities RG48_RS13295 SM00869 Autotransporter beta-domain RG48_RS13300 SM00530 Helix-turn-helix XRE-family like proteins RG48_RS13360 SM00342 helix_turn_helix, arabinose operon control protein RG48_RS13375 SM00382 ATPases associated with a variety of cellular activities RG48_RS13415 SM00267 diguanylate cyclase RG48_RS13420 SM00052 Putative diguanylate phosphodiesterase RG48_RS13420 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RG48_RS13420 SM00091 PAS domain RG48_RS13420 SM00267 diguanylate cyclase RG48_RS13445 SM00382 ATPases associated with a variety of cellular activities RG48_RS13450 SM00382 ATPases associated with a variety of cellular activities RG48_RS13475 SM00919 Malic enzyme, NAD binding domain RG48_RS13475 SM01274 RG48_RS13475 RG48_RS13480 SM00829 Enoylreductase RG48_RS13485 SM00530 Helix-turn-helix XRE-family like proteins RG48_RS13535 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RG48_RS13565 SM00903 Flavin reductase like domain RG48_RS13640 SM00345 helix_turn_helix gluconate operon transcriptional repressor RG48_RS13640 SM00895 RG48_RS13640 RG48_RS13645 SM00829 Enoylreductase RG48_RS13700 SM00382 ATPases associated with a variety of cellular activities RG48_RS13710 SM00345 helix_turn_helix gluconate operon transcriptional repressor RG48_RS13715 SM00530 Helix-turn-helix XRE-family like proteins RG48_RS13735 SM00530 Helix-turn-helix XRE-family like proteins RG48_RS13750 SM01321 RG48_RS13750 RG48_RS13800 SM01150 RG48_RS13800 RG48_RS13810 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RG48_RS13810 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RG48_RS13810 SM00319 Homologues of the ligand binding domain of Tar RG48_RS13850 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RG48_RS13865 SM00382 ATPases associated with a variety of cellular activities RG48_RS13865 SM00487 DEAD-like helicases superfamily RG48_RS13865 SM00490 helicase superfamily c-terminal domain RG48_RS13865 SM00847 Helicase associated domain (HA2) Add an annotation RG48_RS13875 SM00195 Dual specificity phosphatase, catalytic domain RG48_RS13875 SM00404 Protein tyrosine phosphatase, catalytic domain motif RG48_RS13990 SM00342 helix_turn_helix, arabinose operon control protein RG48_RS14025 SM00890 Domain of unknown function RG48_RS14045 SM00487 DEAD-like helicases superfamily RG48_RS14045 SM00490 helicase superfamily c-terminal domain RG48_RS14060 SM00091 PAS domain RG48_RS14060 SM00267 diguanylate cyclase RG48_RS14065 SM00463 Small MutS-related domain RG48_RS14105 SM00100 Cyclic nucleotide-monophosphate binding domain RG48_RS14105 SM00419 helix_turn_helix, cAMP Regulatory protein RG48_RS14160 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RG48_RS14170 SM00091 PAS domain RG48_RS14170 SM00382 ATPases associated with a variety of cellular activities RG48_RS14185 SM00354 helix_turn _helix lactose operon repressor RG48_RS14195 SM00382 ATPases associated with a variety of cellular activities RG48_RS14240 SM00642 Alpha-amylase domain RG48_RS14245 SM00450 Rhodanese Homology Domain RG48_RS14270 SM00382 ATPases associated with a variety of cellular activities RG48_RS14295 SM00530 Helix-turn-helix XRE-family like proteins RG48_RS14305 SM01230 RG48_RS14305 RG48_RS14340 SM00382 ATPases associated with a variety of cellular activities RG48_RS14345 SM00382 ATPases associated with a variety of cellular activities RG48_RS14365 SM00357 Cold shock protein domain RG48_RS14365 SM00955 RG48_RS14365 RG48_RS14375 SM00052 Putative diguanylate phosphodiesterase RG48_RS14375 SM00091 PAS domain RG48_RS14375 SM00267 diguanylate cyclase RG48_RS14385 SM00420 helix_turn_helix, Deoxyribose operon repressor RG48_RS14385 SM01134 RG48_RS14385 RG48_RS14400 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family RG48_RS14405 SM00028 Tetratricopeptide repeats RG48_RS14415 SM00014 Acid phosphatase homologues RG48_RS14455 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain RG48_RS14455 SM00437 Bacterial DNA topoisomerase I DNA-binding domain RG48_RS14455 SM00493 RG48_RS14455 RG48_RS14475 SM00822 RG48_RS14475 RG48_RS14485 SM00363 S4 RNA-binding domain RG48_RS14505 SM00481 DNA polymerase alpha chain like domain RG48_RS14585 SM00857 Resolvase, N terminal domain RG48_RS14690 SM00409 Immunoglobulin RG48_RS14865 SM00507 HNH nucleases RG48_RS14905 SM00530 Helix-turn-helix XRE-family like proteins RG48_RS14965 SM00155 Phospholipase D. Active site motifs. RG48_RS14975 SM00382 ATPases associated with a variety of cellular activities RG48_RS14980 SM00382 ATPases associated with a variety of cellular activities RG48_RS15020 SM00528 Domain in histone-like proteins of HNS family RG48_RS15030 SM00448 cheY-homologous receiver domain RG48_RS15080 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RG48_RS15095 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RG48_RS15095 SM00387 Histidine kinase-like ATPases RG48_RS15100 SM00421 helix_turn_helix, Lux Regulon RG48_RS15100 SM00448 cheY-homologous receiver domain RG48_RS15170 SM00937 RG48_RS15170 RG48_RS15190 SM01400 RG48_RS15190 RG48_RS15245 SM00490 helicase superfamily c-terminal domain RG48_RS15300 SM00530 Helix-turn-helix XRE-family like proteins RG48_RS15340 SM00487 DEAD-like helicases superfamily RG48_RS15340 SM00490 helicase superfamily c-terminal domain RG48_RS15390 SM00869 Autotransporter beta-domain RG48_RS15395 SM00091 PAS domain RG48_RS15395 SM00382 ATPases associated with a variety of cellular activities RG48_RS15405 SM01120 RG48_RS15405 RG48_RS15455 SM01091 Transporter associated domain RG48_RS15460 SM01005 Alanine racemase, C-terminal domain RG48_RS15475 SM00345 helix_turn_helix gluconate operon transcriptional repressor RG48_RS15630 SM00052 Putative diguanylate phosphodiesterase RG48_RS15630 SM01034 Sensors of blue-light using FAD RG48_RS15635 SM00422 helix_turn_helix, mercury resistance RG48_RS15655 SM01329 RG48_RS15655 RG48_RS15685 SM00448 cheY-homologous receiver domain RG48_RS15685 SM00862 Transcriptional regulatory protein, C terminal RG48_RS15690 SM00387 Histidine kinase-like ATPases RG48_RS15695 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. RG48_RS15710 SM00382 ATPases associated with a variety of cellular activities RG48_RS15745 SM00382 ATPases associated with a variety of cellular activities RG48_RS15760 SM00487 DEAD-like helicases superfamily RG48_RS15760 SM00490 helicase superfamily c-terminal domain RG48_RS15760 SM00982 RG48_RS15760 RG48_RS15760 SM01058 CarD-like/TRCF domain RG48_RS15765 SM00257 Lysin motif RG48_RS15855 SM00825 Beta-ketoacyl synthase RG48_RS15865 SM00822 RG48_RS15865 RG48_RS15870 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. RG48_RS15900 SM00363 S4 RNA-binding domain RG48_RS15910 SM00316 Ribosomal protein S1-like RNA-binding domain RG48_RS15925 SM00047 Lysozyme subfamily 2 RG48_RS15970 SM00858 RG48_RS15970 RG48_RS16055 SM00867 YceI-like domain RG48_RS16060 SM00450 Rhodanese Homology Domain RG48_RS16105 SM00155 Phospholipase D. Active site motifs. RG48_RS16110 SM00506 Appr-1"-p processing enzyme RG48_RS16145 SM00421 helix_turn_helix, Lux Regulon RG48_RS16175 SM00481 DNA polymerase alpha chain like domain RG48_RS16210 SM00267 diguanylate cyclase RG48_RS16215 SM00028 Tetratricopeptide repeats RG48_RS16315 SM00903 Flavin reductase like domain RG48_RS16360 SM00271 DnaJ molecular chaperone homology domain RG48_RS16385 SM00448 cheY-homologous receiver domain RG48_RS16385 SM00862 Transcriptional regulatory protein, C terminal RG48_RS16395 SM00073 Histidine Phosphotransfer domain RG48_RS16395 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RG48_RS16395 SM00387 Histidine kinase-like ATPases RG48_RS16395 SM00388 His Kinase A (phosphoacceptor) domain RG48_RS16395 SM00448 cheY-homologous receiver domain RG48_RS16420 SM00357 Cold shock protein domain RG48_RS16425 SM00357 Cold shock protein domain RG48_RS16455 SM00226 Low molecular weight phosphatase family RG48_RS16540 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase RG48_RS16545 SM00992 Hemimethylated DNA-binding protein YccV like RG48_RS16550 SM00881 CoA binding domain RG48_RS16565 SM00851 MGS-like domain RG48_RS16640 SM00382 ATPases associated with a variety of cellular activities RG48_RS16645 SM00981 RG48_RS16645 RG48_RS16710 SM00062 Bacterial periplasmic substrate-binding proteins RG48_RS16725 SM00382 ATPases associated with a variety of cellular activities RG48_RS16760 SM00849 Metallo-beta-lactamase superfamily RG48_RS16830 SM00382 ATPases associated with a variety of cellular activities RG48_RS16835 SM00849 Metallo-beta-lactamase superfamily RG48_RS16840 SM00411 bacterial (prokaryotic) histone like domain RG48_RS16845 SM00316 Ribosomal protein S1-like RNA-binding domain RG48_RS16905 SM00530 Helix-turn-helix XRE-family like proteins RG48_RS16960 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RG48_RS16970 SM00382 ATPases associated with a variety of cellular activities RG48_RS16980 SM00843 RG48_RS16980 RG48_RS16985 SM00344 helix_turn_helix ASNC type RG48_RS17000 SM00382 ATPases associated with a variety of cellular activities RG48_RS17005 SM00382 ATPases associated with a variety of cellular activities RG48_RS17020 SM00316 Ribosomal protein S1-like RNA-binding domain RG48_RS17030 SM00382 ATPases associated with a variety of cellular activities RG48_RS17030 SM01086 C-terminal, D2-small domain, of ClpB protein RG48_RS17040 SM00357 Cold shock protein domain RG48_RS17045 SM00382 ATPases associated with a variety of cellular activities RG48_RS17115 SM00644 RG48_RS17115 RG48_RS17130 SM00382 ATPases associated with a variety of cellular activities RG48_RS17135 SM00062 Bacterial periplasmic substrate-binding proteins RG48_RS17135 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. RG48_RS17150 SM00062 Bacterial periplasmic substrate-binding proteins RG48_RS17150 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. RG48_RS17180 SM00382 ATPases associated with a variety of cellular activities RG48_RS17370 SM00014 Acid phosphatase homologues RG48_RS17375 SM00420 helix_turn_helix, Deoxyribose operon repressor RG48_RS17375 SM01134 RG48_RS17375 RG48_RS17380 SM00936 Penicillin-binding protein 5, C-terminal domain RG48_RS17400 SM00729 Elongator protein 3, MiaB family, Radical SAM RG48_RS17405 SM00267 diguanylate cyclase RG48_RS17410 SM00052 Putative diguanylate phosphodiesterase RG48_RS17430 SM00382 ATPases associated with a variety of cellular activities RG48_RS17440 SM00852 Probable molybdopterin binding domain RG48_RS17475 SM00382 ATPases associated with a variety of cellular activities RG48_RS17490 SM00529 Helix-turn-helix diphteria tox regulatory element RG48_RS17535 SM00062 Bacterial periplasmic substrate-binding proteins RG48_RS17535 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. RG48_RS17545 SM00382 ATPases associated with a variety of cellular activities RG48_RS17575 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. RG48_RS17610 SM00487 DEAD-like helicases superfamily RG48_RS17610 SM00488 RG48_RS17610 RG48_RS17610 SM00491 RG48_RS17610 RG48_RS17625 SM00487 DEAD-like helicases superfamily RG48_RS17625 SM00490 helicase superfamily c-terminal domain RG48_RS17640 SM00382 ATPases associated with a variety of cellular activities RG48_RS17665 SM00155 Phospholipase D. Active site motifs. RG48_RS17700 SM00852 Probable molybdopterin binding domain RG48_RS17705 SM00729 Elongator protein 3, MiaB family, Radical SAM RG48_RS17715 SM00487 DEAD-like helicases superfamily RG48_RS17715 SM00490 helicase superfamily c-terminal domain RG48_RS17735 SM00729 Elongator protein 3, MiaB family, Radical SAM RG48_RS17735 SM00876 Biotin and Thiamin Synthesis associated domain RG48_RS17755 SM00267 diguanylate cyclase RG48_RS17805 SM00342 helix_turn_helix, arabinose operon control protein RG48_RS17845 SM00530 Helix-turn-helix XRE-family like proteins RG48_RS17850 SM00530 Helix-turn-helix XRE-family like proteins RG48_RS17980 SM00382 ATPases associated with a variety of cellular activities RG48_RS18010 SM00382 ATPases associated with a variety of cellular activities RG48_RS18035 SM00855 Phosphoglycerate mutase family RG48_RS18165 SM00872 Alpha mannosidase, middle domain RG48_RS18175 SM00345 helix_turn_helix gluconate operon transcriptional repressor RG48_RS18175 SM00866 RG48_RS18175 RG48_RS18180 SM00881 CoA binding domain RG48_RS18195 SM00861 Transketolase, pyrimidine binding domain RG48_RS18270 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain RG48_RS18270 SM01232 RG48_RS18270 RG48_RS18280 SM00797 Allophanate hydrolase subunit 2 RG48_RS18285 SM00796 Allophanate hydrolase subunit 1 RG48_RS18385 SM00387 Histidine kinase-like ATPases RG48_RS18385 SM00388 His Kinase A (phosphoacceptor) domain RG48_RS18390 SM00448 cheY-homologous receiver domain RG48_RS18390 SM00862 Transcriptional regulatory protein, C terminal RG48_RS18565 SM00729 Elongator protein 3, MiaB family, Radical SAM RG48_RS18580 SM00116 Domain in cystathionine beta-synthase and other proteins. RG48_RS18580 SM01091 Transporter associated domain RG48_RS18600 SM00062 Bacterial periplasmic substrate-binding proteins RG48_RS18615 SM00382 ATPases associated with a variety of cellular activities RG48_RS18645 SM00671 Sel1-like repeats. RG48_RS18650 SM00271 DnaJ molecular chaperone homology domain RG48_RS18660 SM00671 Sel1-like repeats. RG48_RS18690 SM00855 Phosphoglycerate mutase family RG48_RS18720 SM00936 Penicillin-binding protein 5, C-terminal domain RG48_RS18750 SM00729 Elongator protein 3, MiaB family, Radical SAM RG48_RS18770 SM00357 Cold shock protein domain RG48_RS18790 SM00448 cheY-homologous receiver domain RG48_RS18795 SM00091 PAS domain RG48_RS18795 SM00387 Histidine kinase-like ATPases RG48_RS18800 SM00764 Citrate lyase ligase C-terminal domain RG48_RS18855 SM00829 Enoylreductase RG48_RS18895 SM00470 ParB-like nuclease domain RG48_RS18925 SM00822 RG48_RS18925 RG48_RS18970 SM00382 ATPases associated with a variety of cellular activities RG48_RS18980 SM00823 Phosphopantetheine attachment site RG48_RS18980 SM00824 Thioesterase RG48_RS18985 SM00923 MbtH-like protein RG48_RS19095 SM00448 cheY-homologous receiver domain RG48_RS19095 SM00862 Transcriptional regulatory protein, C terminal RG48_RS19100 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RG48_RS19100 SM00387 Histidine kinase-like ATPases RG48_RS19100 SM00388 His Kinase A (phosphoacceptor) domain RG48_RS19155 SM00028 Tetratricopeptide repeats RG48_RS19170 SM00342 helix_turn_helix, arabinose operon control protein RG48_RS19180 SM00421 helix_turn_helix, Lux Regulon RG48_RS19180 SM00448 cheY-homologous receiver domain RG48_RS19225 SM00840 RG48_RS19225 RG48_RS19245 SM01001 AIR carboxylase RG48_RS19320 SM00346 helix_turn_helix isocitrate lyase regulation RG48_RS19335 SM00450 Rhodanese Homology Domain RG48_RS19355 SM00382 ATPases associated with a variety of cellular activities RG48_RS19365 SM00822 RG48_RS19365 RG48_RS19380 SM00382 ATPases associated with a variety of cellular activities RG48_RS19385 SM00244 prohibitin homologues RG48_RS19395 SM00422 helix_turn_helix, mercury resistance RG48_RS19435 SM00530 Helix-turn-helix XRE-family like proteins RG48_RS19490 SM00387 Histidine kinase-like ATPases RG48_RS19495 SM00493 RG48_RS19495 RG48_RS19505 SM00382 ATPases associated with a variety of cellular activities RG48_RS19570 SM01266 RG48_RS19570 RG48_RS19580 SM00052 Putative diguanylate phosphodiesterase RG48_RS19615 SM00938 Nitrogen regulatory protein P-II RG48_RS19620 SM00382 ATPases associated with a variety of cellular activities RG48_RS19625 SM00382 ATPases associated with a variety of cellular activities RG48_RS19630 SM00344 helix_turn_helix ASNC type RG48_RS19655 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RG48_RS19665 SM00411 bacterial (prokaryotic) histone like domain RG48_RS19670 SM00382 ATPases associated with a variety of cellular activities RG48_RS19670 SM00464 Found in ATP-dependent protease La (LON) RG48_RS19675 SM00382 ATPases associated with a variety of cellular activities RG48_RS19675 SM00994 ClpX C4-type zinc finger RG48_RS19675 SM01086 C-terminal, D2-small domain, of ClpB protein RG48_RS19760 SM00981 RG48_RS19760 RG48_RS19775 SM00861 Transketolase, pyrimidine binding domain RG48_RS19830 SM00507 HNH nucleases RG48_RS19845 SM01323 RG48_RS19845 RG48_RS19865 SM00642 Alpha-amylase domain RG48_RS19880 SM00091 PAS domain RG48_RS19880 SM00387 Histidine kinase-like ATPases RG48_RS19880 SM00388 His Kinase A (phosphoacceptor) domain RG48_RS19885 SM00448 cheY-homologous receiver domain RG48_RS19885 SM00862 Transcriptional regulatory protein, C terminal RG48_RS19960 SM00267 diguanylate cyclase RG48_RS19970 SM00098 Alkaline phosphatase homologues RG48_RS20025 SM00869 Autotransporter beta-domain RG48_RS20035 SM01004 Delta-aminolevulinic acid dehydratase RG48_RS20050 SM00382 ATPases associated with a variety of cellular activities RG48_RS20055 SM00062 Bacterial periplasmic substrate-binding proteins RG48_RS20090 SM00829 Enoylreductase RG48_RS20120 SM00859 Semialdehyde dehydrogenase, NAD binding domain RG48_RS20145 SM00346 helix_turn_helix isocitrate lyase regulation RG48_RS20150 SM00354 helix_turn _helix lactose operon repressor RG48_RS20160 SM01038 Beta galactosidase small chain RG48_RS20170 SM01266 RG48_RS20170 RG48_RS20180 SM01116 RG48_RS20180 RG48_RS20185 SM00947 Carbonic anhydrase RG48_RS20245 SM00382 ATPases associated with a variety of cellular activities RG48_RS20270 SM00829 Enoylreductase RG48_RS20305 SM00248 ankyrin repeats RG48_RS20325 SM00052 Putative diguanylate phosphodiesterase RG48_RS20325 SM00421 helix_turn_helix, Lux Regulon RG48_RS20395 SM00342 helix_turn_helix, arabinose operon control protein RG48_RS20415 SM00342 helix_turn_helix, arabinose operon control protein RG48_RS20415 SM00871 Bacterial transcription activator, effector binding domain RG48_RS20420 SM00634 Bacterial Ig-like domain (group 1) RG48_RS20455 SM00421 helix_turn_helix, Lux Regulon RG48_RS20510 SM01092 CO dehydrogenase flavoprotein C-terminal domain RG48_RS20515 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RG48_RS20535 SM00342 helix_turn_helix, arabinose operon control protein RG48_RS20610 SM01266 RG48_RS20610 RG48_RS20635 SM00640 Glycosyl hydrolases family 32 RG48_RS20640 SM00354 helix_turn _helix lactose operon repressor RG48_RS20760 SM00487 DEAD-like helicases superfamily RG48_RS20760 SM00490 helicase superfamily c-terminal domain RG48_RS20835 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase RG48_RS20915 SM01321 RG48_RS20915 RG48_RS21030 SM00479 RG48_RS21030 RG48_RS21045 SM00849 Metallo-beta-lactamase superfamily RG48_RS21050 SM00257 Lysin motif RG48_RS21105 SM00382 ATPases associated with a variety of cellular activities RG48_RS21105 SM00930 RG48_RS21105 RG48_RS21155 SM01322 RG48_RS21155 RG48_RS21170 SM00977 TilS substrate C-terminal domain RG48_RS21190 SM00481 DNA polymerase alpha chain like domain RG48_RS21220 SM00935 Outer membrane protein (OmpH-like) RG48_RS21230 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RG48_RS21285 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RG48_RS21305 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RG48_RS21315 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RG48_RS21360 SM00382 ATPases associated with a variety of cellular activities RG48_RS21380 SM00487 DEAD-like helicases superfamily RG48_RS21380 SM00490 helicase superfamily c-terminal domain RG48_RS21380 SM00847 Helicase associated domain (HA2) Add an annotation RG48_RS21495 SM00382 ATPases associated with a variety of cellular activities RG48_RS21500 SM00947 Carbonic anhydrase RG48_RS21510 SM00564 beta-propeller repeat RG48_RS21575 SM00345 helix_turn_helix gluconate operon transcriptional repressor RG48_RS21575 SM00895 RG48_RS21575 RG48_RS21590 SM00644 RG48_RS21590 RG48_RS21620 SM01240 RG48_RS21620 RG48_RS21645 SM00957 SecA DEAD-like domain RG48_RS21645 SM00958 SecA preprotein cross-linking domain RG48_RS21660 SM00864 Tubulin/FtsZ family, GTPase domain RG48_RS21660 SM00865 Tubulin/FtsZ family, C-terminal domain RG48_RS21665 SM00842 Cell division protein FtsA RG48_RS21740 SM00354 helix_turn _helix lactose operon repressor RG48_RS21770 SM00917 LeuA allosteric (dimerisation) domain RG48_RS21775 SM01329 RG48_RS21775 RG48_RS21815 SM00382 ATPases associated with a variety of cellular activities RG48_RS21825 SM00342 helix_turn_helix, arabinose operon control protein RG48_RS21845 SM01007 Class II Aldolase and Adducin N-terminal domain RG48_RS21850 SM00486 DNA polymerase type-B family RG48_RS21855 SM00487 DEAD-like helicases superfamily RG48_RS21855 SM00490 helicase superfamily c-terminal domain RG48_RS21865 SM00271 DnaJ molecular chaperone homology domain RG48_RS21885 SM00650 Ribosomal RNA adenine dimethylases RG48_RS21950 SM00893 Electron transfer flavoprotein domain RG48_RS21955 SM00893 Electron transfer flavoprotein domain RG48_RS22000 SM00851 MGS-like domain RG48_RS22000 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RG48_RS22005 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain RG48_RS22040 SM00904 Riboflavin kinase RG48_RS22085 SM00271 DnaJ molecular chaperone homology domain RG48_RS22110 SM00852 Probable molybdopterin binding domain RG48_RS22175 SM00448 cheY-homologous receiver domain RG48_RS22175 SM00862 Transcriptional regulatory protein, C terminal RG48_RS22185 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RG48_RS22185 SM00387 Histidine kinase-like ATPases RG48_RS22185 SM00388 His Kinase A (phosphoacceptor) domain RG48_RS22190 SM00448 cheY-homologous receiver domain RG48_RS22190 SM00862 Transcriptional regulatory protein, C terminal RG48_RS22200 SM00342 helix_turn_helix, arabinose operon control protein RG48_RS22200 SM00871 Bacterial transcription activator, effector binding domain RG48_RS22205 SM00855 Phosphoglycerate mutase family RG48_RS22230 SM00382 ATPases associated with a variety of cellular activities RG48_RS22240 SM00530 Helix-turn-helix XRE-family like proteins RG48_RS22245 SM00382 ATPases associated with a variety of cellular activities RG48_RS22265 SM00530 Helix-turn-helix XRE-family like proteins RG48_RS22280 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain RG48_RS22285 SM01133 RG48_RS22285 RG48_RS22320 SM00749 bacterial OsmY and nodulation domain RG48_RS22380 SM00421 helix_turn_helix, Lux Regulon RG48_RS22385 SM00421 helix_turn_helix, Lux Regulon RG48_RS22405 SM00382 ATPases associated with a variety of cellular activities RG48_RS22420 SM00829 Enoylreductase RG48_RS22425 SM00895 RG48_RS22425 RG48_RS22435 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RG48_RS22435 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RG48_RS22435 SM00319 Homologues of the ligand binding domain of Tar RG48_RS22440 SM00347 helix_turn_helix multiple antibiotic resistance protein RG48_RS22480 SM00342 helix_turn_helix, arabinose operon control protein RG48_RS22490 SM00903 Flavin reductase like domain RG48_RS22505 SM00833 Cobalamin synthesis protein cobW C-terminal domain RG48_RS22520 SM00345 helix_turn_helix gluconate operon transcriptional repressor RG48_RS22610 SM00345 helix_turn_helix gluconate operon transcriptional repressor RG48_RS22610 SM00895 RG48_RS22610 RG48_RS22730 SM00493 RG48_RS22730 RG48_RS22730 SM00778 Zinc-binding domain of primase-helicase RG48_RS22730 SM00885 D5 N terminal like RG48_RS22790 SM00829 Enoylreductase RG48_RS22860 SM00822 RG48_RS22860 RG48_RS22900 SM00831 Cation transporter/ATPase, N-terminus RG48_RS22905 SM00354 helix_turn _helix lactose operon repressor RG48_RS22915 SM00642 Alpha-amylase domain RG48_RS22970 SM00382 ATPases associated with a variety of cellular activities RG48_RS23010 SM01091 Transporter associated domain RG48_RS23085 SM01321 RG48_RS23085 RG48_RS23125 SM01007 Class II Aldolase and Adducin N-terminal domain RG48_RS23135 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family RG48_RS23160 SM00420 helix_turn_helix, Deoxyribose operon repressor RG48_RS23160 SM01134 RG48_RS23160 RG48_RS23225 SM01130 RG48_RS23225 RG48_RS23230 SM00346 helix_turn_helix isocitrate lyase regulation RG48_RS23235 SM00967 RNA 2'-O ribose methyltransferase substrate binding RG48_RS23240 SM00316 Ribosomal protein S1-like RNA-binding domain RG48_RS23240 SM00357 Cold shock protein domain RG48_RS23240 SM00955 RG48_RS23240 RG48_RS23250 SM00788 Adenylosuccinate synthetase RG48_RS23260 SM00244 prohibitin homologues RG48_RS23265 SM00244 prohibitin homologues RG48_RS23285 SM00853 MutL C terminal dimerisation domain RG48_RS23285 SM01340 RG48_RS23285 RG48_RS23290 SM00646 RG48_RS23290 RG48_RS23325 SM00479 RG48_RS23325 RG48_RS23410 SM00841 Elongation factor P, C-terminal RG48_RS23410 SM01185 RG48_RS23410 RG48_RS23435 SM00883 Chaperonin 10 Kd subunit RG48_RS23490 SM00862 Transcriptional regulatory protein, C terminal RG48_RS23545 SM00091 PAS domain RG48_RS23545 SM00387 Histidine kinase-like ATPases RG48_RS23550 SM00448 cheY-homologous receiver domain RG48_RS23590 SM00342 helix_turn_helix, arabinose operon control protein RG48_RS23600 SM00342 helix_turn_helix, arabinose operon control protein RG48_RS23615 SM00448 cheY-homologous receiver domain RG48_RS23615 SM00862 Transcriptional regulatory protein, C terminal RG48_RS23620 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RG48_RS23620 SM00387 Histidine kinase-like ATPases RG48_RS23620 SM00388 His Kinase A (phosphoacceptor) domain RG48_RS23660 SM00382 ATPases associated with a variety of cellular activities RG48_RS23680 SM00345 helix_turn_helix gluconate operon transcriptional repressor RG48_RS23680 SM00866 RG48_RS23680 RG48_RS23705 SM00382 ATPases associated with a variety of cellular activities RG48_RS23710 SM00382 ATPases associated with a variety of cellular activities RG48_RS23720 SM00072 Guanylate kinase homologues. RG48_RS23745 SM00849 Metallo-beta-lactamase superfamily RG48_RS23770 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RG48_RS23780 SM00671 Sel1-like repeats. RG48_RS23795 SM00028 Tetratricopeptide repeats RG48_RS23880 SM00422 helix_turn_helix, mercury resistance RG48_RS23885 SM00342 helix_turn_helix, arabinose operon control protein RG48_RS23890 SM00052 Putative diguanylate phosphodiesterase RG48_RS23940 SM01005 Alanine racemase, C-terminal domain RG48_RS23945 SM00382 ATPases associated with a variety of cellular activities RG48_RS23950 SM00829 Enoylreductase RG48_RS24000 SM00563 Phosphate acyltransferases RG48_RS24045 SM00382 ATPases associated with a variety of cellular activities RG48_RS24130 SM00244 prohibitin homologues RG48_RS24140 SM00363 S4 RNA-binding domain RG48_RS24155 SM01018 B12 binding domain RG48_RS24160 SM00346 helix_turn_helix isocitrate lyase regulation RG48_RS24225 SM00798 AICARFT/IMPCHase bienzyme RG48_RS24225 SM00851 MGS-like domain RG48_RS24230 SM01209 RG48_RS24230 RG48_RS24230 SM01210 RG48_RS24230 RG48_RS24235 SM00382 ATPases associated with a variety of cellular activities RG48_RS24235 SM00448 cheY-homologous receiver domain RG48_RS24240 SM00387 Histidine kinase-like ATPases RG48_RS24240 SM00388 His Kinase A (phosphoacceptor) domain RG48_RS24260 SM00411 bacterial (prokaryotic) histone like domain RG48_RS24315 SM00876 Biotin and Thiamin Synthesis associated domain RG48_RS24325 SM00663 RNA polymerase I subunit A N-terminus RG48_RS24355 SM00649 Ribosomal protein L11/L12 RG48_RS24360 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. RG48_RS24360 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. RG48_RS24480 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RG48_RS24495 SM00859 Semialdehyde dehydrogenase, NAD binding domain RG48_RS24515 SM00342 helix_turn_helix, arabinose operon control protein RG48_RS24645 SM00487 DEAD-like helicases superfamily RG48_RS24645 SM00490 helicase superfamily c-terminal domain RG48_RS24650 SM00354 helix_turn _helix lactose operon repressor RG48_RS24665 SM00382 ATPases associated with a variety of cellular activities RG48_RS24665 SM01086 C-terminal, D2-small domain, of ClpB protein RG48_RS24760 SM00448 cheY-homologous receiver domain RG48_RS24760 SM00862 Transcriptional regulatory protein, C terminal RG48_RS24765 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RG48_RS24765 SM00387 Histidine kinase-like ATPases RG48_RS24765 SM00388 His Kinase A (phosphoacceptor) domain RG48_RS24800 SM00342 helix_turn_helix, arabinose operon control protein RG48_RS24805 SM00342 helix_turn_helix, arabinose operon control protein RG48_RS24825 SM01007 Class II Aldolase and Adducin N-terminal domain RG48_RS24870 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RG48_RS24945 SM00829 Enoylreductase RG48_RS24950 SM01133 RG48_RS24950 RG48_RS24965 SM00420 helix_turn_helix, Deoxyribose operon repressor RG48_RS24965 SM01134 RG48_RS24965 RG48_RS24980 SM00345 helix_turn_helix gluconate operon transcriptional repressor RG48_RS24980 SM00866 RG48_RS24980 RG48_RS24995 SM01230 RG48_RS24995 RG48_RS25000 SM00091 PAS domain RG48_RS25000 SM00387 Histidine kinase-like ATPases RG48_RS25000 SM00388 His Kinase A (phosphoacceptor) domain RG48_RS25005 SM00382 ATPases associated with a variety of cellular activities RG48_RS25005 SM00448 cheY-homologous receiver domain RG48_RS25015 SM00729 Elongator protein 3, MiaB family, Radical SAM RG48_RS25035 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs RG48_RS25035 SM00474 3'-5' exonuclease RG48_RS25035 SM00475 5'-3' exonuclease RG48_RS25035 SM00482 DNA polymerase A domain RG48_RS25045 SM00563 Phosphate acyltransferases