SH05_RS00005	PF00468	Ribosomal protein L34
SH05_RS00010	PF00825	Ribonuclease P
SH05_RS00015	PF01809	SH05_RS00015
SH05_RS00020	PF02096	60Kd inner membrane protein
SH05_RS00020	PF14849	YidC periplasmic domain
SH05_RS00025	PF01926	50S ribosome-binding GTPase
SH05_RS00025	PF10396	GTP-binding protein TrmE N-terminus
SH05_RS00025	PF12631	Catalytic cysteine-containing C-terminus of GTPase, MnmE
SH05_RS00030	PF08053	SH05_RS00030
SH05_RS00035	PF01212	Beta-eliminating lyase
SH05_RS00040	PF03222	Tryptophan/tyrosine permease family
SH05_RS00045	PF07690	Major Facilitator Superfamily
SH05_RS00050	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS00050	PF03466	LysR substrate binding domain
SH05_RS00060	PF03358	NADPH-dependent FMN reductase
SH05_RS00065	PF00860	Permease family
SH05_RS00070	PF13419	Haloacid dehalogenase-like hydrolase
SH05_RS00080	PF03691	SH05_RS00080
SH05_RS00085	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
SH05_RS00090	PF00756	Putative esterase
SH05_RS00090	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
SH05_RS00095	PF02264	LamB porin
SH05_RS00095	PF11471	SH05_RS00095
SH05_RS00100	PF00232	Glycosyl hydrolase family 1
SH05_RS00105	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
SH05_RS00105	PF00367	phosphotransferase system, EIIB
SH05_RS00105	PF02378	Phosphotransferase system, EIIC
SH05_RS00110	PF00874	PRD domain
SH05_RS00110	PF03123	CAT RNA binding domain
SH05_RS00115	PF01895	PhoU domain
SH05_RS00120	PF00005	ABC transporter
SH05_RS00125	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS00130	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS00135	PF12849	PBP superfamily domain
SH05_RS00140	PF01380	SIS domain
SH05_RS00140	PF13522	Glutamine amidotransferase domain
SH05_RS00145	PF00132	Bacterial transferase hexapeptide (six repeats)
SH05_RS00145	PF12804	MobA-like NTP transferase domain
SH05_RS00150	PF00401	ATP synthase, Delta/Epsilon chain, long alpha-helix domain
SH05_RS00150	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
SH05_RS00155	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
SH05_RS00155	PF02874	ATP synthase alpha/beta family, beta-barrel domain
SH05_RS00160	PF00231	ATP synthase
SH05_RS00165	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
SH05_RS00165	PF00306	ATP synthase alpha/beta chain, C terminal domain
SH05_RS00165	PF02874	ATP synthase alpha/beta family, beta-barrel domain
SH05_RS00170	PF00213	ATP synthase delta (OSCP) subunit
SH05_RS00175	PF00430	ATP synthase B/B' CF(0)
SH05_RS00180	PF00137	ATP synthase subunit C
SH05_RS00185	PF00119	ATP synthase A chain
SH05_RS00190	PF03899	SH05_RS00190
SH05_RS00195	PF02527	rRNA small subunit methyltransferase G
SH05_RS00200	PF01134	Glucose inhibited division protein A
SH05_RS00200	PF13932	GidA associated domain 3
SH05_RS00205	PF00258	Flavodoxin
SH05_RS00210	PF01037	AsnC family
SH05_RS00210	PF13412	Winged helix-turn-helix DNA-binding
SH05_RS00215	PF03590	Aspartate-ammonia ligase
SH05_RS00220	PF05762	VWA domain containing CoxE-like protein
SH05_RS00225	PF07728	AAA domain (dynein-related subfamily)
SH05_RS00225	PF12592	Protein of unknown function (DUF3763)
SH05_RS00230	PF02705	SH05_RS00230
SH05_RS00235	PF05025	RbsD / FucU transport protein family
SH05_RS00240	PF00005	ABC transporter
SH05_RS00245	PF02653	SH05_RS00245
SH05_RS00250	PF13407	Periplasmic binding protein domain
SH05_RS00255	PF00294	pfkB family carbohydrate kinase
SH05_RS00260	PF00356	Bacterial regulatory proteins, lacI family
SH05_RS00260	PF13377	Periplasmic binding protein-like domain
SH05_RS00265	PF07690	Major Facilitator Superfamily
SH05_RS00270	PF00392	Bacterial regulatory proteins, gntR family
SH05_RS00270	PF07729	FCD domain
SH05_RS00305	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS00305	PF03466	LysR substrate binding domain
SH05_RS00310	PF04219	SH05_RS00310
SH05_RS00315	PF01078	Magnesium chelatase, subunit ChlI
SH05_RS00315	PF13335	SH05_RS00315
SH05_RS00315	PF13541	Subunit ChlI of Mg-chelatase
SH05_RS00320	PF08046	SH05_RS00320
SH05_RS00330	PF13710	ACT domain
SH05_RS00335	PF01063	Aminotransferase class IV
SH05_RS00340	PF00920	Dehydratase family
SH05_RS00345	PF00291	Pyridoxal-phosphate dependent enzyme
SH05_RS00345	PF00585	C-terminal regulatory domain of Threonine dehydratase
SH05_RS00350	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS00350	PF03466	LysR substrate binding domain
SH05_RS00355	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
SH05_RS00355	PF07991	Acetohydroxy acid isomeroreductase, catalytic domain
SH05_RS00360	PF13616	PPIC-type PPIASE domain
SH05_RS00370	PF00580	UvrD/REP helicase N-terminal domain
SH05_RS00370	PF13361	UvrD-like helicase C-terminal domain
SH05_RS00375	PF02541	Ppx/GppA phosphatase family
SH05_RS00380	PF00270	DEAD/DEAH box helicase
SH05_RS00380	PF00271	Helicase conserved C-terminal domain
SH05_RS00385	PF00085	Thioredoxin
SH05_RS00395	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
SH05_RS00395	PF07497	Rho termination factor, RNA-binding domain
SH05_RS00395	PF07498	Rho termination factor, N-terminal domain
SH05_RS00405	PF00953	Glycosyl transferase family 4
SH05_RS00410	PF02706	Chain length determinant protein
SH05_RS00415	PF02350	UDP-N-acetylglucosamine 2-epimerase
SH05_RS00420	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
SH05_RS00420	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
SH05_RS00420	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
SH05_RS00425	PF16363	SH05_RS00425
SH05_RS00430	PF00483	Nucleotidyl transferase
SH05_RS00440	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
SH05_RS00445	PF01943	SH05_RS00445
SH05_RS00450	PF07429	SH05_RS00450
SH05_RS00455	PF06899	SH05_RS00455
SH05_RS00460	PF03808	SH05_RS00460
SH05_RS00465	PF00324	Amino acid permease
SH05_RS00490	PF04055	Radical SAM superfamily
SH05_RS00490	PF13186	Iron-sulfur cluster-binding domain
SH05_RS00490	PF13353	4Fe-4S single cluster domain
SH05_RS00495	PF00884	Sulfatase
SH05_RS00500	PF07219	SH05_RS00500
SH05_RS00500	PF07719	Tetratricopeptide repeat
SH05_RS00505	PF04375	SH05_RS00505
SH05_RS00510	PF02602	Uroporphyrinogen-III synthase HemD
SH05_RS00515	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
SH05_RS00515	PF03900	Porphobilinogen deaminase, C-terminal domain
SH05_RS00520	PF01295	SH05_RS00520
SH05_RS00520	PF12633	SH05_RS00520
SH05_RS00525	PF01491	Frataxin-like domain
SH05_RS00530	PF13627	SH05_RS00530
SH05_RS00535	PF01678	Diaminopimelate epimerase
SH05_RS00540	PF04340	Protein of unknown function, DUF484
SH05_RS00545	PF00589	Phage integrase family
SH05_RS00545	PF02899	Phage integrase, N-terminal SAM-like domain
SH05_RS00550	PF13419	Haloacid dehalogenase-like hydrolase
SH05_RS00555	PF00580	UvrD/REP helicase N-terminal domain
SH05_RS00555	PF13361	UvrD-like helicase C-terminal domain
SH05_RS00560	PF09992	Predicted periplasmic protein (DUF2233)
SH05_RS00570	PF01544	CorA-like Mg2+ transporter protein
SH05_RS00575	PF10947	SH05_RS00575
SH05_RS00585	PF00892	EamA-like transporter family
SH05_RS00590	PF03061	Thioesterase superfamily
SH05_RS00595	PF02253	Phospholipase A1
SH05_RS00600	PF00270	DEAD/DEAH box helicase
SH05_RS00600	PF00271	Helicase conserved C-terminal domain
SH05_RS00600	PF00570	HRDC domain
SH05_RS00600	PF09382	RQC domain
SH05_RS00600	PF16124	SH05_RS00600
SH05_RS00605	PF01810	SH05_RS00605
SH05_RS00610	PF01810	SH05_RS00610
SH05_RS00615	PF12146	Putative lysophospholipase
SH05_RS00620	PF08282	haloacid dehalogenase-like hydrolase
SH05_RS00625	PF00892	EamA-like transporter family
SH05_RS00630	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS00630	PF03466	LysR substrate binding domain
SH05_RS00635	PF01717	Cobalamin-independent synthase, Catalytic domain
SH05_RS00635	PF08267	Cobalamin-independent synthase, N-terminal domain
SH05_RS00640	PF01738	Dienelactone hydrolase family
SH05_RS00645	PF01048	Phosphorylase superfamily
SH05_RS00650	PF02646	SH05_RS00650
SH05_RS00655	PF01209	ubiE/COQ5 methyltransferase family
SH05_RS00660	PF02036	SCP-2 sterol transfer family
SH05_RS00665	PF03109	SH05_RS00665
SH05_RS00670	PF02416	mttA/Hcf106 family
SH05_RS00680	PF00902	Sec-independent protein translocase protein (TatC)
SH05_RS00685	PF01026	TatD related DNase
SH05_RS00690	PF02357	Transcription termination factor nusG
SH05_RS00695	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
SH05_RS00700	PF00175	Oxidoreductase NAD-binding domain
SH05_RS00700	PF00970	Oxidoreductase FAD-binding domain
SH05_RS00705	PF00108	Thiolase, N-terminal domain
SH05_RS00705	PF02803	Thiolase, C-terminal domain
SH05_RS00710	PF00378	Enoyl-CoA hydratase/isomerase family
SH05_RS00710	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
SH05_RS00710	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
SH05_RS00715	PF00557	Metallopeptidase family M24
SH05_RS00720	PF01205	Uncharacterized protein family UPF0029
SH05_RS00720	PF09186	Domain of unknown function (DUF1949)
SH05_RS00725	PF02386	Cation transport protein
SH05_RS00730	PF12724	Flavodoxin domain
SH05_RS00760	PF03205	Molybdopterin guanine dinucleotide synthesis protein B
SH05_RS00765	PF12804	MobA-like NTP transferase domain
SH05_RS00770	PF06288	Protein of unknown function (DUF1040)
SH05_RS00775	PF01636	Phosphotransferase enzyme family
SH05_RS00780	PF01323	DSBA-like thioredoxin domain
SH05_RS00785	PF06097	SH05_RS00785
SH05_RS00790	PF01553	Acyltransferase
SH05_RS00800	PF00476	DNA polymerase family A
SH05_RS00800	PF01367	5'-3' exonuclease, C-terminal SAM fold
SH05_RS00800	PF01612	3'-5' exonuclease
SH05_RS00800	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
SH05_RS00805	PF01926	50S ribosome-binding GTPase
SH05_RS00810	PF04220	SH05_RS00810
SH05_RS00815	PF04055	Radical SAM superfamily
SH05_RS00815	PF06969	HemN C-terminal domain
SH05_RS00825	PF00072	Response regulator receiver domain
SH05_RS00825	PF00158	Sigma-54 interaction domain
SH05_RS00825	PF02954	Bacterial regulatory protein, Fis family
SH05_RS00830	PF00512	His Kinase A (phospho-acceptor) domain
SH05_RS00830	PF00989	PAS fold
SH05_RS00830	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH05_RS00835	PF00120	Glutamine synthetase, catalytic domain
SH05_RS00835	PF03951	Glutamine synthetase, beta-Grasp domain
SH05_RS00845	PF00009	Elongation factor Tu GTP binding domain
SH05_RS00845	PF00679	Elongation factor G C-terminus
SH05_RS00845	PF03144	Elongation factor Tu domain 2
SH05_RS00850	PF00392	Bacterial regulatory proteins, gntR family
SH05_RS00850	PF07702	UTRA domain
SH05_RS00855	PF01261	Xylose isomerase-like TIM barrel
SH05_RS00860	PF07690	Major Facilitator Superfamily
SH05_RS00865	PF06178	Oligogalacturonate-specific porin protein (KdgM)
SH05_RS00870	PF13347	MFS/sugar transport protein
SH05_RS00875	PF13347	MFS/sugar transport protein
SH05_RS00880	PF01055	Glycosyl hydrolases family 31
SH05_RS00885	PF01263	Aldose 1-epimerase
SH05_RS00890	PF07221	N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
SH05_RS00895	PF01791	DeoC/LacD family aldolase
SH05_RS00900	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
SH05_RS00900	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
SH05_RS00905	PF00294	pfkB family carbohydrate kinase
SH05_RS00910	PF00455	SH05_RS00910
SH05_RS00910	PF08220	DeoR-like helix-turn-helix domain
SH05_RS00915	PF13419	Haloacid dehalogenase-like hydrolase
SH05_RS00920	PF03631	SH05_RS00920
SH05_RS00925	PF02580	D-Tyr-tRNA(Tyr) deacylase
SH05_RS00930	PF09500	Putative thioesterase (yiiD_Cterm)
SH05_RS00930	PF13673	Acetyltransferase (GNAT) domain
SH05_RS00935	PF01402	Ribbon-helix-helix protein, copG family
SH05_RS00945	PF12035	SH05_RS00945
SH05_RS00950	PF04216	Protein involved in formate dehydrogenase formation
SH05_RS00955	PF01292	Prokaryotic cytochrome b561
SH05_RS00960	PF09163	Formate dehydrogenase N, transmembrane
SH05_RS00960	PF13247	4Fe-4S dicluster domain
SH05_RS00965	PF00384	Molybdopterin oxidoreductase
SH05_RS00965	PF01568	Molydopterin dinucleotide binding domain
SH05_RS00970	PF00384	Molybdopterin oxidoreductase
SH05_RS00970	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
SH05_RS00975	PF02634	FdhD/NarQ family
SH05_RS00980	PF12889	Protein of unknown function (DUF3829)
SH05_RS00985	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
SH05_RS00985	PF08279	HTH domain
SH05_RS00990	PF05343	M42 glutamyl aminopeptidase
SH05_RS00995	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
SH05_RS00995	PF02378	Phosphotransferase system, EIIC
SH05_RS01000	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
SH05_RS01005	PF05336	Domain of unknown function (DUF718)
SH05_RS01010	PF00596	Class II Aldolase and Adducin N-terminal domain
SH05_RS01015	PF06134	L-rhamnose isomerase (RhaA)
SH05_RS01020	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
SH05_RS01020	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
SH05_RS01030	PF02311	AraC-like ligand binding domain
SH05_RS01030	PF12833	Helix-turn-helix domain
SH05_RS01035	PF02311	AraC-like ligand binding domain
SH05_RS01035	PF12833	Helix-turn-helix domain
SH05_RS01040	PF06379	SH05_RS01040
SH05_RS01045	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
SH05_RS01045	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
SH05_RS01055	PF03812	SH05_RS01055
SH05_RS01060	PF03473	MOSC domain
SH05_RS01060	PF03475	3-alpha domain
SH05_RS01065	PF00512	His Kinase A (phospho-acceptor) domain
SH05_RS01065	PF00672	HAMP domain
SH05_RS01065	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH05_RS01065	PF16527	SH05_RS01065
SH05_RS01070	PF00072	Response regulator receiver domain
SH05_RS01070	PF00486	Transcriptional regulatory protein, C terminal
SH05_RS01075	PF07813	LTXXQ motif family protein
SH05_RS01080	PF01545	Cation efflux family
SH05_RS01080	PF16916	SH05_RS01080
SH05_RS01085	PF00365	Phosphofructokinase
SH05_RS01090	PF13531	Bacterial extracellular solute-binding protein
SH05_RS01095	PF02611	CDP-diacylglycerol pyrophosphatase
SH05_RS01100	PF00121	Triosephosphate isomerase
SH05_RS01105	PF07305	SH05_RS01105
SH05_RS01110	PF05656	SH05_RS01110
SH05_RS01115	PF04175	Protein of unknown function (DUF406)
SH05_RS01120	PF00582	Universal stress protein family
SH05_RS01125	PF00175	Oxidoreductase NAD-binding domain
SH05_RS01125	PF00970	Oxidoreductase FAD-binding domain
SH05_RS01130	PF03320	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
SH05_RS01135	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
SH05_RS01135	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
SH05_RS01140	PF00230	Major intrinsic protein
SH05_RS01145	PF06005	Protein of unknown function (DUF904)
SH05_RS01150	PF03737	Demethylmenaquinone methyltransferase
SH05_RS01155	PF01040	UbiA prenyltransferase family
SH05_RS01160	PF00004	ATPase family associated with various cellular activities (AAA)
SH05_RS01160	PF07724	AAA domain (Cdc48 subfamily)
SH05_RS01160	PF10431	C-terminal, D2-small domain, of ClpB protein
SH05_RS01165	PF00227	Proteasome subunit
SH05_RS01170	PF05036	Sporulation related domain
SH05_RS01175	PF00356	Bacterial regulatory proteins, lacI family
SH05_RS01175	PF13377	Periplasmic binding protein-like domain
SH05_RS01180	PF00270	DEAD/DEAH box helicase
SH05_RS01180	PF00271	Helicase conserved C-terminal domain
SH05_RS01185	PF01197	Ribosomal protein L31
SH05_RS01190	PF05708	Orthopoxvirus protein of unknown function (DUF830)
SH05_RS01195	PF01340	Met Apo-repressor, MetJ
SH05_RS01205	PF00696	Amino acid kinase family
SH05_RS01205	PF00742	Homoserine dehydrogenase
SH05_RS01205	PF03447	Homoserine dehydrogenase, NAD binding domain
SH05_RS01215	PF02219	Methylenetetrahydrofolate reductase
SH05_RS01220	PF00141	Peroxidase
SH05_RS01225	PF00892	EamA-like transporter family
SH05_RS01230	PF06940	SH05_RS01230
SH05_RS01235	PF12035	SH05_RS01235
SH05_RS01240	PF00465	Iron-containing alcohol dehydrogenase
SH05_RS01245	PF00923	Transaldolase
SH05_RS01250	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
SH05_RS01250	PF00381	PTS HPr component phosphorylation site
SH05_RS01250	PF00391	PEP-utilising enzyme, mobile domain
SH05_RS01250	PF02896	PEP-utilising enzyme, TIM barrel domain
SH05_RS01250	PF05524	PEP-utilising enzyme, N-terminal
SH05_RS01260	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
SH05_RS01265	PF01228	Glycine radical
SH05_RS01265	PF02901	Pyruvate formate lyase
SH05_RS01270	PF04055	Radical SAM superfamily
SH05_RS01270	PF13353	4Fe-4S single cluster domain
SH05_RS01275	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
SH05_RS01280	PF12833	Helix-turn-helix domain
SH05_RS01285	PF00884	Sulfatase
SH05_RS01285	PF08019	SH05_RS01285
SH05_RS01290	PF00311	Phosphoenolpyruvate carboxylase
SH05_RS01300	PF01546	Peptidase family M20/M25/M40
SH05_RS01300	PF07687	Peptidase dimerisation domain
SH05_RS01305	PF01118	Semialdehyde dehydrogenase, NAD binding domain
SH05_RS01305	PF02774	Semialdehyde dehydrogenase, dimerisation domain
SH05_RS01310	PF00696	Amino acid kinase family
SH05_RS01315	PF00206	Lyase
SH05_RS01315	PF14698	Argininosuccinate lyase C-terminal
SH05_RS01320	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS01320	PF03466	LysR substrate binding domain
SH05_RS01325	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
SH05_RS01325	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SH05_RS01330	PF00440	Bacterial regulatory proteins, tetR family
SH05_RS01335	PF07226	SH05_RS01335
SH05_RS01340	PF05958	tRNA (Uracil-5-)-methyltransferase
SH05_RS01345	PF00593	TonB dependent receptor
SH05_RS01345	PF07715	TonB-dependent Receptor Plug Domain
SH05_RS01350	PF01177	Asp/Glu/Hydantoin racemase
SH05_RS01375	PF01565	FAD binding domain
SH05_RS01375	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
SH05_RS01380	PF02237	Biotin protein ligase C terminal domain
SH05_RS01380	PF03099	Biotin/lipoate A/B protein ligase family
SH05_RS01380	PF08279	HTH domain
SH05_RS01385	PF00485	Phosphoribulokinase / Uridine kinase family
SH05_RS01415	PF00009	Elongation factor Tu GTP binding domain
SH05_RS01415	PF03143	Elongation factor Tu C-terminal domain
SH05_RS01415	PF03144	Elongation factor Tu domain 2
SH05_RS01420	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
SH05_RS01425	PF00467	KOW motif
SH05_RS01425	PF02357	Transcription termination factor nusG
SH05_RS01430	PF00298	Ribosomal protein L11, RNA binding domain
SH05_RS01430	PF03946	Ribosomal protein L11, N-terminal domain
SH05_RS01435	PF00687	Ribosomal protein L1p/L10e family
SH05_RS01440	PF00466	Ribosomal protein L10
SH05_RS01445	PF00542	Ribosomal protein L7/L12 C-terminal domain
SH05_RS01445	PF16320	SH05_RS01445
SH05_RS01450	PF00562	RNA polymerase Rpb2, domain 6
SH05_RS01450	PF04560	RNA polymerase Rpb2, domain 7
SH05_RS01450	PF04561	RNA polymerase Rpb2, domain 2
SH05_RS01450	PF04563	RNA polymerase beta subunit
SH05_RS01450	PF04565	RNA polymerase Rpb2, domain 3
SH05_RS01450	PF10385	RNA polymerase beta subunit external 1 domain
SH05_RS01455	PF00623	RNA polymerase Rpb1, domain 2
SH05_RS01455	PF04983	RNA polymerase Rpb1, domain 3
SH05_RS01455	PF04997	RNA polymerase Rpb1, domain 1
SH05_RS01455	PF04998	RNA polymerase Rpb1, domain 5
SH05_RS01455	PF05000	RNA polymerase Rpb1, domain 4
SH05_RS01465	PF04055	Radical SAM superfamily
SH05_RS01465	PF06968	Biotin and Thiamin Synthesis associated domain
SH05_RS01470	PF05690	Thiazole biosynthesis protein ThiG
SH05_RS01475	PF02597	ThiS family
SH05_RS01480	PF00899	ThiF family
SH05_RS01485	PF02581	Thiamine monophosphate synthase/TENI
SH05_RS01490	PF01964	ThiC family
SH05_RS01490	PF13667	ThiC-associated domain
SH05_RS01495	PF04353	Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ
SH05_RS01500	PF00293	NUDIX domain
SH05_RS01500	PF09297	NADH pyrophosphatase zinc ribbon domain
SH05_RS01505	PF01208	Uroporphyrinogen decarboxylase (URO-D)
SH05_RS01510	PF04493	Endonuclease V
SH05_RS01515	PF04222	Protein of unknown function (DUF416)
SH05_RS01520	PF00216	Bacterial DNA-binding protein
SH05_RS01525	PF07356	SH05_RS01525
SH05_RS01525	PF08139	SH05_RS01525
SH05_RS01530	PF13801	Heavy-metal resistance
SH05_RS01535	PF00512	His Kinase A (phospho-acceptor) domain
SH05_RS01535	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH05_RS01540	PF00072	Response regulator receiver domain
SH05_RS01540	PF00158	Sigma-54 interaction domain
SH05_RS01540	PF02954	Bacterial regulatory protein, Fis family
SH05_RS01545	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
SH05_RS01545	PF02843	Phosphoribosylglycinamide synthetase, C domain
SH05_RS01545	PF02844	Phosphoribosylglycinamide synthetase, N domain
SH05_RS01550	PF01808	AICARFT/IMPCHase bienzyme
SH05_RS01550	PF02142	MGS-like domain
SH05_RS01590	PF13673	Acetyltransferase (GNAT) domain
SH05_RS01595	PF04204	Homoserine O-succinyltransferase
SH05_RS01600	PF01274	Malate synthase
SH05_RS01605	PF00463	Isocitrate lyase family
SH05_RS01610	PF06315	Isocitrate dehydrogenase kinase/phosphatase (AceK)
SH05_RS01615	PF07906	SH05_RS01615
SH05_RS01620	PF01614	Bacterial transcriptional regulator
SH05_RS01620	PF09339	IclR helix-turn-helix domain
SH05_RS01625	PF00809	Pterin binding enzyme
SH05_RS01625	PF02310	B12 binding domain
SH05_RS01625	PF02574	Homocysteine S-methyltransferase
SH05_RS01625	PF02607	B12 binding domain
SH05_RS01625	PF02965	Vitamin B12 dependent methionine synthase, activation domain
SH05_RS01630	PF02690	SH05_RS01630
SH05_RS01635	PF03575	Peptidase family S51
SH05_RS01640	PF00849	RNA pseudouridylate synthase
SH05_RS01640	PF01479	S4 domain
SH05_RS01645	PF11656	SH05_RS01645
SH05_RS01650	PF00696	Amino acid kinase family
SH05_RS01650	PF01842	ACT domain
SH05_RS01655	PF00342	Phosphoglucose isomerase
SH05_RS01660	PF03400	SH05_RS01660
SH05_RS01665	PF03811	SH05_RS01665
SH05_RS01665	PF12759	SH05_RS01665
SH05_RS01670	PF11106	SH05_RS01670
SH05_RS01675	PF11102	Group 4 capsule polysaccharide formation lipoprotein gfcB
SH05_RS01680	PF06251	Capsule biosynthesis GfcC
SH05_RS01685	PF06082	SH05_RS01685
SH05_RS01690	PF17089	SH05_RS01690
SH05_RS01700	PF06146	SH05_RS01700
SH05_RS01705	PF00083	Sugar (and other) transporter
SH05_RS01710	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS01715	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS01715	PF14785	Maltose transport system permease protein MalF P2 domain
SH05_RS01720	PF13416	Bacterial extracellular solute-binding protein
SH05_RS01730	PF00005	ABC transporter
SH05_RS01730	PF08402	TOBE domain
SH05_RS01735	PF02264	LamB porin
SH05_RS01740	PF07148	SH05_RS01740
SH05_RS01750	PF13599	Pentapeptide repeats (9 copies)
SH05_RS01750	PF13981	SopA-like central domain
SH05_RS01755	PF04345	Chorismate lyase
SH05_RS01760	PF01040	UbiA prenyltransferase family
SH05_RS01765	PF01553	Acyltransferase
SH05_RS01770	PF01219	Prokaryotic diacylglycerol kinase
SH05_RS01775	PF00717	Peptidase S24-like
SH05_RS01775	PF01726	LexA DNA binding domain
SH05_RS01780	PF01554	MatE
SH05_RS01785	PF05532	CsbD-like
SH05_RS01790	PF01475	Ferric uptake regulator family
SH05_RS01800	PF10897	SH05_RS01800
SH05_RS01805	PF01207	Dihydrouridine synthase (Dus)
SH05_RS01810	PF09583	SH05_RS01810
SH05_RS01815	PF00107	Zinc-binding dehydrogenase
SH05_RS01815	PF08240	Alcohol dehydrogenase GroES-like domain
SH05_RS01820	PF00772	DnaB-like helicase N terminal domain
SH05_RS01820	PF03796	DnaB-like helicase C terminal domain
SH05_RS01825	PF00842	Alanine racemase, C-terminal domain
SH05_RS01825	PF01168	Alanine racemase, N-terminal domain
SH05_RS01830	PF00155	Aminotransferase class I and II
SH05_RS01840	PF03767	HAD superfamily, subfamily IIIB (Acid phosphatase)
SH05_RS01845	PF01894	Uncharacterised protein family UPF0047
SH05_RS01850	PF04237	YjbR
SH05_RS01855	PF00005	ABC transporter
SH05_RS01860	PF00436	Single-strand binding protein family
SH05_RS01865	PF15940	SH05_RS01865
SH05_RS01870	PF00563	EAL domain
SH05_RS01870	PF12792	SH05_RS01870
SH05_RS01875	PF12833	Helix-turn-helix domain
SH05_RS01880	PF00376	MerR family regulatory protein
SH05_RS01880	PF09278	MerR, DNA binding
SH05_RS01885	PF00860	Permease family
SH05_RS01890	PF00999	Sodium/hydrogen exchanger family
SH05_RS01895	PF00805	Pentapeptide repeats (8 copies)
SH05_RS01895	PF13599	Pentapeptide repeats (9 copies)
SH05_RS01900	PF00474	Sodium:solute symporter family
SH05_RS01905	PF04341	SH05_RS01905
SH05_RS01910	PF00501	AMP-binding enzyme
SH05_RS01910	PF13193	AMP-binding enzyme C-terminal domain
SH05_RS01910	PF16177	SH05_RS01910
SH05_RS01915	PF02335	Cytochrome c552
SH05_RS01920	PF09699	Doubled CXXCH motif (Paired_CXXCH_1)
SH05_RS01920	PF13435	Cytochrome c554 and c-prime
SH05_RS01925	PF00037	4Fe-4S binding domain
SH05_RS01925	PF13247	4Fe-4S dicluster domain
SH05_RS01930	PF03916	SH05_RS01930
SH05_RS01935	PF01578	SH05_RS01935
SH05_RS01935	PF16327	SH05_RS01935
SH05_RS01940	PF03918	Cytochrome C biogenesis protein
SH05_RS01950	PF00375	Sodium:dicarboxylate symporter family
SH05_RS01955	PF08238	Sel1 repeat
SH05_RS01960	PF00384	Molybdopterin oxidoreductase
SH05_RS01960	PF01568	Molydopterin dinucleotide binding domain
SH05_RS01965	PF00384	Molybdopterin oxidoreductase
SH05_RS01965	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
SH05_RS01970	PF02321	Outer membrane efflux protein
SH05_RS01975	PF04632	SH05_RS01975
SH05_RS01980	PF13437	HlyD family secretion protein
SH05_RS01980	PF13533	Biotin-lipoyl like
SH05_RS01985	PF17090	SH05_RS01985
SH05_RS01990	PF00753	Metallo-beta-lactamase superfamily
SH05_RS01990	PF14863	Alkyl sulfatase dimerisation
SH05_RS01990	PF14864	Alkyl sulfatase C-terminal
SH05_RS01995	PF00480	ROK family
SH05_RS02000	PF00834	Ribulose-phosphate 3 epimerase family
SH05_RS02005	PF02653	SH05_RS02005
SH05_RS02010	PF00005	ABC transporter
SH05_RS02015	PF13407	Periplasmic binding protein domain
SH05_RS02020	PF01380	SIS domain
SH05_RS02020	PF01418	Helix-turn-helix domain, rpiR family
SH05_RS02025	PF02502	Ribose/Galactose Isomerase
SH05_RS02035	PF12706	Beta-lactamase superfamily domain
SH05_RS02040	PF00583	Acetyltransferase (GNAT) family
SH05_RS02045	PF13238	AAA domain
SH05_RS02050	PF07969	Amidohydrolase family
SH05_RS02055	PF00005	ABC transporter
SH05_RS02060	PF00005	ABC transporter
SH05_RS02065	PF06007	SH05_RS02065
SH05_RS02070	PF05861	SH05_RS02070
SH05_RS02075	PF05845	Bacterial phosphonate metabolism protein (PhnH)
SH05_RS02080	PF06754	SH05_RS02080
SH05_RS02085	PF00392	Bacterial regulatory proteins, gntR family
SH05_RS02085	PF07702	UTRA domain
SH05_RS02095	PF12974	ABC transporter, phosphonate, periplasmic substrate-binding protein
SH05_RS02100	PF00005	ABC transporter
SH05_RS02105	PF06983	3-demethylubiquinone-9 3-methyltransferase
SH05_RS02110	PF03831	PhnA protein
SH05_RS02110	PF08274	PhnA Zinc-Ribbon
SH05_RS02115	PF00350	Dynamin family
SH05_RS02120	PF13990	SH05_RS02120
SH05_RS02125	PF00083	Sugar (and other) transporter
SH05_RS02125	PF08946	Osmosensory transporter coiled coil
SH05_RS02135	PF00512	His Kinase A (phospho-acceptor) domain
SH05_RS02135	PF00672	HAMP domain
SH05_RS02135	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH05_RS02140	PF00072	Response regulator receiver domain
SH05_RS02140	PF00486	Transcriptional regulatory protein, C terminal
SH05_RS02145	PF00884	Sulfatase
SH05_RS02145	PF08019	SH05_RS02145
SH05_RS02150	PF13520	Amino acid permease
SH05_RS02155	PF12833	Helix-turn-helix domain
SH05_RS02160	PF01276	Orn/Lys/Arg decarboxylase, major domain
SH05_RS02160	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
SH05_RS02160	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
SH05_RS02165	PF12833	Helix-turn-helix domain
SH05_RS02175	PF02056	Family 4 glycosyl hydrolase
SH05_RS02175	PF11975	Family 4 glycosyl hydrolase C-terminal domain
SH05_RS02180	PF13347	MFS/sugar transport protein
SH05_RS02185	PF09997	SH05_RS02185
SH05_RS02190	PF05681	SH05_RS02190
SH05_RS02190	PF05683	Fumarase C-terminus
SH05_RS02195	PF03605	SH05_RS02195
SH05_RS02205	PF00072	Response regulator receiver domain
SH05_RS02210	PF00989	PAS fold
SH05_RS02210	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH05_RS02210	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
SH05_RS02210	PF17203	SH05_RS02210
SH05_RS02215	PF06902	Divergent 4Fe-4S mono-cluster
SH05_RS02220	PF14542	GCN5-related N-acetyl-transferase
SH05_RS02225	PF11080	Protein of unknown function (DUF2622)
SH05_RS02230	PF10753	SH05_RS02230
SH05_RS02235	PF00152	tRNA synthetases class II (D, K and N)
SH05_RS02235	PF01336	OB-fold nucleic acid binding domain
SH05_RS02240	PF00854	POT family
SH05_RS02245	PF01276	Orn/Lys/Arg decarboxylase, major domain
SH05_RS02245	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
SH05_RS02245	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
SH05_RS02250	PF13520	Amino acid permease
SH05_RS02255	PF00486	Transcriptional regulatory protein, C terminal
SH05_RS02270	PF02683	SH05_RS02270
SH05_RS02270	PF11412	Disulphide bond corrector protein DsbC
SH05_RS02270	PF13899	Thioredoxin-like
SH05_RS02275	PF03091	CutA1 divalent ion tolerance protein
SH05_RS02280	PF03605	SH05_RS02280
SH05_RS02285	PF00206	Lyase
SH05_RS02285	PF10415	Fumarase C C-terminus
SH05_RS02290	PF04186	SH05_RS02290
SH05_RS02295	PF13520	Amino acid permease
SH05_RS02300	PF00166	Chaperonin 10 Kd subunit
SH05_RS02305	PF00118	TCP-1/cpn60 chaperonin family
SH05_RS02310	PF13698	SH05_RS02310
SH05_RS02315	PF15922	SH05_RS02315
SH05_RS02320	PF04055	Radical SAM superfamily
SH05_RS02320	PF13353	4Fe-4S single cluster domain
SH05_RS02325	PF01132	Elongation factor P (EF-P) OB domain
SH05_RS02325	PF08207	Elongation factor P (EF-P) KOW-like domain
SH05_RS02325	PF09285	Elongation factor P, C-terminal
SH05_RS02330	PF08085	SH05_RS02330
SH05_RS02335	PF08085	SH05_RS02335
SH05_RS02340	PF00893	Small Multidrug Resistance protein
SH05_RS02345	PF08212	Lipocalin-like domain
SH05_RS02350	PF00144	Beta-lactamase
SH05_RS02355	PF02313	Fumarate reductase subunit D
SH05_RS02360	PF02300	Fumarate reductase subunit C
SH05_RS02365	PF13085	2Fe-2S iron-sulfur cluster binding domain
SH05_RS02365	PF13183	4Fe-4S dicluster domain
SH05_RS02370	PF00890	FAD binding domain
SH05_RS02370	PF02910	Fumarate reductase flavoprotein C-term
SH05_RS02375	PF00152	tRNA synthetases class II (D, K and N)
SH05_RS02380	PF13520	Amino acid permease
SH05_RS02390	PF10840	SH05_RS02390
SH05_RS02395	PF00924	Mechanosensitive ion channel
SH05_RS02395	PF12794	SH05_RS02395
SH05_RS02395	PF12795	SH05_RS02395
SH05_RS02400	PF02666	SH05_RS02400
SH05_RS02405	PF03193	Protein of unknown function, DUF258
SH05_RS02410	PF00929	Exonuclease
SH05_RS02430	PF08331	SH05_RS02430
SH05_RS02430	PF13484	SH05_RS02430
SH05_RS02435	PF01256	Carbohydrate kinase
SH05_RS02435	PF03853	YjeF-related protein N-terminus
SH05_RS02440	PF02367	Uncharacterised P-loop hydrolase UPF0079
SH05_RS02445	PF01520	N-acetylmuramoyl-L-alanine amidase
SH05_RS02450	PF01119	DNA mismatch repair protein, C-terminal domain
SH05_RS02450	PF08676	MutL C terminal dimerisation domain
SH05_RS02450	PF13589	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH05_RS02455	PF01715	IPP transferase
SH05_RS02465	PF01926	50S ribosome-binding GTPase
SH05_RS02465	PF13167	SH05_RS02465
SH05_RS02465	PF16360	SH05_RS02465
SH05_RS02470	PF01145	SPFH domain / Band 7 family
SH05_RS02470	PF12221	SH05_RS02470
SH05_RS02475	PF01145	SPFH domain / Band 7 family
SH05_RS02480	PF09838	SH05_RS02480
SH05_RS02485	PF00709	Adenylosuccinate synthetase
SH05_RS02490	PF02082	Transcriptional regulator
SH05_RS02495	PF00575	S1 RNA binding domain
SH05_RS02495	PF00773	RNB domain
SH05_RS02495	PF08206	Ribonuclease B OB domain
SH05_RS02495	PF08461	Ribonuclease R winged-helix domain
SH05_RS02500	PF00588	SpoU rRNA Methylase family
SH05_RS02500	PF08032	RNA 2'-O ribose methyltransferase substrate binding
SH05_RS02505	PF09938	SH05_RS02505
SH05_RS02510	PF04012	SH05_RS02510
SH05_RS02515	PF10679	SH05_RS02515
SH05_RS02520	PF03994	SH05_RS02520
SH05_RS02525	PF06693	SH05_RS02525
SH05_RS02530	PF03738	Glutathionylspermidine synthase preATP-grasp
SH05_RS02535	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
SH05_RS02535	PF02770	Acyl-CoA dehydrogenase, middle domain
SH05_RS02540	PF07338	Protein of unknown function (DUF1471)
SH05_RS02545	PF07338	Protein of unknown function (DUF1471)
SH05_RS02550	PF00326	Prolyl oligopeptidase family
SH05_RS02555	PF00455	SH05_RS02555
SH05_RS02555	PF08220	DeoR-like helix-turn-helix domain
SH05_RS02560	PF13483	Beta-lactamase superfamily domain
SH05_RS02565	PF03611	SH05_RS02565
SH05_RS02570	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
SH05_RS02575	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
SH05_RS02580	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
SH05_RS02585	PF01261	Xylose isomerase-like TIM barrel
SH05_RS02590	PF00596	Class II Aldolase and Adducin N-terminal domain
SH05_RS02595	PF07338	Protein of unknown function (DUF1471)
SH05_RS02605	PF01250	Ribosomal protein S6
SH05_RS02610	PF00436	Single-strand binding protein family
SH05_RS02615	PF01084	Ribosomal protein S18
SH05_RS02620	PF01281	Ribosomal protein L9, N-terminal domain
SH05_RS02620	PF03948	Ribosomal protein L9, C-terminal domain
SH05_RS02625	PF10887	SH05_RS02625
SH05_RS02635	PF04225	Opacity-associated protein A LysM-like domain
SH05_RS02635	PF08525	SH05_RS02635
SH05_RS02640	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
SH05_RS02640	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
SH05_RS02645	PF00324	Amino acid permease
SH05_RS02650	PF01814	Hemerythrin HHE cation binding domain
SH05_RS02650	PF04405	SH05_RS02650
SH05_RS02655	PF00892	EamA-like transporter family
SH05_RS02660	PF05368	NmrA-like family
SH05_RS02665	PF01638	HxlR-like helix-turn-helix
SH05_RS02670	PF00149	Calcineurin-like phosphoesterase
SH05_RS02670	PF02872	5'-nucleotidase, C-terminal domain
SH05_RS02675	PF00459	Inositol monophosphatase family
SH05_RS02685	PF09695	SH05_RS02685
SH05_RS02690	PF06526	Protein of unknown function (DUF1107)
SH05_RS02695	PF00571	CBS domain
SH05_RS02695	PF01595	SH05_RS02695
SH05_RS02695	PF03471	Transporter associated domain
SH05_RS02700	PF01625	Peptide methionine sulfoxide reductase
SH05_RS02710	PF01103	Surface antigen
SH05_RS02710	PF07244	Surface antigen variable number repeat
SH05_RS02715	PF04357	SH05_RS02715
SH05_RS02720	PF06094	AIG2-like family
SH05_RS02725	PF04014	Antidote-toxin recognition MazE
SH05_RS02730	PF02452	PemK-like protein
SH05_RS02735	PF00719	Inorganic pyrophosphatase
SH05_RS02740	PF13407	Periplasmic binding protein domain
SH05_RS02745	PF00005	ABC transporter
SH05_RS02750	PF02653	SH05_RS02750
SH05_RS02755	PF02653	SH05_RS02755
SH05_RS02760	PF00316	Fructose-1-6-bisphosphatase
SH05_RS02765	PF01225	Mur ligase family, catalytic domain
SH05_RS02765	PF02875	Mur ligase family, glutamate ligase domain
SH05_RS02765	PF08245	Mur ligase middle domain
SH05_RS02770	PF04751	Protein of unknown function (DUF615)
SH05_RS02775	PF01523	Putative modulator of DNA gyrase
SH05_RS02780	PF07361	Cytochrome b562
SH05_RS02785	PF13353	4Fe-4S single cluster domain
SH05_RS02790	PF03477	ATP cone domain
SH05_RS02790	PF13597	Anaerobic ribonucleoside-triphosphate reductase
SH05_RS02795	PF00128	Alpha amylase, catalytic domain
SH05_RS02795	PF11941	Domain of unknown function (DUF3459)
SH05_RS02800	PF00367	phosphotransferase system, EIIB
SH05_RS02800	PF02378	Phosphotransferase system, EIIC
SH05_RS02805	PF00356	Bacterial regulatory proteins, lacI family
SH05_RS02805	PF13377	Periplasmic binding protein-like domain
SH05_RS02810	PF00122	E1-E2 ATPase
SH05_RS02810	PF00689	Cation transporting ATPase, C-terminus
SH05_RS02810	PF00690	Cation transporter/ATPase, N-terminus
SH05_RS02810	PF00702	haloacid dehalogenase-like hydrolase
SH05_RS02815	PF01042	Endoribonuclease L-PSP
SH05_RS02820	PF01948	Aspartate carbamoyltransferase regulatory chain, allosteric domain
SH05_RS02820	PF02748	Aspartate carbamoyltransferase regulatory chain, metal binding domain
SH05_RS02825	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
SH05_RS02825	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
SH05_RS02830	PF08052	SH05_RS02830
SH05_RS02840	PF01042	Endoribonuclease L-PSP
SH05_RS02845	PF13561	Enoyl-(Acyl carrier protein) reductase
SH05_RS02850	PF00440	Bacterial regulatory proteins, tetR family
SH05_RS02855	PF04074	Domain of unknown function (DUF386)
SH05_RS02865	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
SH05_RS02865	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
SH05_RS02870	PF06877	Regulator of ribonuclease activity B
SH05_RS02875	PF00583	Acetyltransferase (GNAT) family
SH05_RS02880	PF05987	SH05_RS02880
SH05_RS02885	PF00133	tRNA synthetases class I (I, L, M and V)
SH05_RS02885	PF08264	Anticodon-binding domain of tRNA
SH05_RS02885	PF10458	Valyl tRNA synthetase tRNA binding arm
SH05_RS02890	PF04364	DNA polymerase III chi subunit, HolC
SH05_RS02895	PF00883	Cytosol aminopeptidase family, catalytic domain
SH05_RS02895	PF02789	Cytosol aminopeptidase family, N-terminal domain
SH05_RS02900	PF03739	SH05_RS02900
SH05_RS02905	PF03739	SH05_RS02905
SH05_RS02910	PF05872	SH05_RS02910
SH05_RS02915	PF00356	Bacterial regulatory proteins, lacI family
SH05_RS02915	PF13377	Periplasmic binding protein-like domain
SH05_RS02920	PF02447	SH05_RS02920
SH05_RS02925	PF00106	short chain dehydrogenase
SH05_RS02930	PF00107	Zinc-binding dehydrogenase
SH05_RS02930	PF08240	Alcohol dehydrogenase GroES-like domain
SH05_RS02935	PF01202	Shikimate kinase
SH05_RS02940	PF00107	Zinc-binding dehydrogenase
SH05_RS02940	PF08240	Alcohol dehydrogenase GroES-like domain
SH05_RS02950	PF00589	Phage integrase family
SH05_RS02950	PF13356	Domain of unknown function (DUF4102)
SH05_RS02960	PF01527	Transposase
SH05_RS02965	PF00665	Integrase core domain
SH05_RS02965	PF13276	SH05_RS02965
SH05_RS02985	PF03050	SH05_RS02985
SH05_RS02995	PF01609	Transposase DDE domain
SH05_RS02995	PF13006	SH05_RS02995
SH05_RS03000	PF07690	Major Facilitator Superfamily
SH05_RS03005	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
SH05_RS03005	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
SH05_RS03010	PF16747	SH05_RS03010
SH05_RS03015	PF11700	SH05_RS03015
SH05_RS03020	PF01527	Transposase
SH05_RS03025	PF00665	Integrase core domain
SH05_RS03025	PF13936	Helix-turn-helix domain
SH05_RS03030	PF01527	Transposase
SH05_RS03045	PF00005	ABC transporter
SH05_RS03050	PF01032	FecCD transport family
SH05_RS03055	PF01032	FecCD transport family
SH05_RS03060	PF01497	Periplasmic binding protein
SH05_RS03065	PF00593	TonB dependent receptor
SH05_RS03065	PF07660	Secretin and TonB N terminus short domain
SH05_RS03065	PF07715	TonB-dependent Receptor Plug Domain
SH05_RS03070	PF04773	FecR protein
SH05_RS03070	PF16220	SH05_RS03070
SH05_RS03070	PF16344	SH05_RS03070
SH05_RS03075	PF04542	Sigma-70 region 2
SH05_RS03075	PF08281	Sigma-70, region 4
SH05_RS03090	PF03400	SH05_RS03090
SH05_RS03095	PF04198	Putative sugar-binding domain
SH05_RS03105	PF02447	SH05_RS03105
SH05_RS03110	PF00920	Dehydratase family
SH05_RS03115	PF00701	Dihydrodipicolinate synthetase family
SH05_RS03120	PF01614	Bacterial transcriptional regulator
SH05_RS03125	PF00455	SH05_RS03125
SH05_RS03125	PF08220	DeoR-like helix-turn-helix domain
SH05_RS03130	PF00834	Ribulose-phosphate 3 epimerase family
SH05_RS03135	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
SH05_RS03140	PF03437	BtpA family
SH05_RS03145	PF03611	SH05_RS03145
SH05_RS03150	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
SH05_RS03155	PF05343	M42 glutamyl aminopeptidase
SH05_RS03160	PF13847	Methyltransferase domain
SH05_RS03165	PF00583	Acetyltransferase (GNAT) family
SH05_RS03170	PF09857	SH05_RS03170
SH05_RS03185	PF13087	AAA domain
SH05_RS03185	PF13091	PLD-like domain
SH05_RS03195	PF01344	Kelch motif
SH05_RS03200	PF06178	Oligogalacturonate-specific porin protein (KdgM)
SH05_RS03215	PF00589	Phage integrase family
SH05_RS03220	PF03400	SH05_RS03220
SH05_RS03225	PF00589	Phage integrase family
SH05_RS03235	PF00419	Fimbrial protein
SH05_RS03240	PF00419	Fimbrial protein
SH05_RS03245	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
SH05_RS03245	PF02753	Pili assembly chaperone PapD, C-terminal domain
SH05_RS03250	PF00577	Outer membrane usher protein
SH05_RS03250	PF13953	PapC C-terminal domain
SH05_RS03250	PF13954	PapC N-terminal domain
SH05_RS03255	PF00419	Fimbrial protein
SH05_RS03265	PF00419	Fimbrial protein
SH05_RS03265	PF09160	FimH, mannose binding
SH05_RS03270	PF02447	SH05_RS03270
SH05_RS03280	PF03786	D-mannonate dehydratase (UxuA)
SH05_RS03285	PF01232	Mannitol dehydrogenase Rossmann domain
SH05_RS03285	PF08125	Mannitol dehydrogenase C-terminal domain
SH05_RS03290	PF15954	SH05_RS03290
SH05_RS03295	PF00392	Bacterial regulatory proteins, gntR family
SH05_RS03295	PF07729	FCD domain
SH05_RS03300	PF10887	SH05_RS03300
SH05_RS03320	PF04965	Gene 25-like lysozyme
SH05_RS03325	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS03325	PF03466	LysR substrate binding domain
SH05_RS03330	PF01979	Amidohydrolase family
SH05_RS03335	PF07670	Nucleoside recognition
SH05_RS03340	PF07670	Nucleoside recognition
SH05_RS03345	PF01885	RNA 2'-phosphotransferase, Tpt1 / KptA family
SH05_RS03350	PF06779	SH05_RS03350
SH05_RS03355	PF06977	SdiA-regulated
SH05_RS03360	PF11823	SH05_RS03360
SH05_RS03365	PF01869	BadF/BadG/BcrA/BcrD ATPase family
SH05_RS03370	PF06050	2-hydroxyglutaryl-CoA dehydratase, D-component
SH05_RS03375	PF04286	SH05_RS03375
SH05_RS03380	PF07690	Major Facilitator Superfamily
SH05_RS03390	PF00155	Aminotransferase class I and II
SH05_RS03390	PF00392	Bacterial regulatory proteins, gntR family
SH05_RS03395	PF06568	SH05_RS03395
SH05_RS03410	PF10117	SH05_RS03410
SH05_RS03415	PF07728	AAA domain (dynein-related subfamily)
SH05_RS03415	PF12102	Domain of unknown function (DUF3578)
SH05_RS03420	PF08845	SH05_RS03420
SH05_RS03425	PF01420	Type I restriction modification DNA specificity domain
SH05_RS03430	PF02384	N-6 DNA Methylase
SH05_RS03430	PF12161	HsdM N-terminal domain
SH05_RS03435	PF00271	Helicase conserved C-terminal domain
SH05_RS03435	PF04313	Type I restriction enzyme R protein N terminus (HSDR_N)
SH05_RS03435	PF04851	Type III restriction enzyme, res subunit
SH05_RS03435	PF08463	SH05_RS03435
SH05_RS03440	PF07690	Major Facilitator Superfamily
SH05_RS03445	PF00440	Bacterial regulatory proteins, tetR family
SH05_RS03445	PF02909	Tetracyclin repressor, C-terminal all-alpha domain
SH05_RS03450	PF04471	Restriction endonuclease
SH05_RS03455	PF02492	CobW/HypB/UreG, nucleotide-binding domain
SH05_RS03455	PF07683	Cobalamin synthesis protein cobW C-terminal domain
SH05_RS03460	PF04328	SH05_RS03460
SH05_RS03465	PF02554	SH05_RS03465
SH05_RS03465	PF13722	SH05_RS03465
SH05_RS03475	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SH05_RS03475	PF00672	HAMP domain
SH05_RS03475	PF02203	Tar ligand binding domain homologue
SH05_RS03480	PF07690	Major Facilitator Superfamily
SH05_RS03485	PF00392	Bacterial regulatory proteins, gntR family
SH05_RS03485	PF07729	FCD domain
SH05_RS03490	PF00107	Zinc-binding dehydrogenase
SH05_RS03490	PF08240	Alcohol dehydrogenase GroES-like domain
SH05_RS03495	PF00884	Sulfatase
SH05_RS03500	PF10696	SH05_RS03500
SH05_RS03505	PF01695	IstB-like ATP binding protein
SH05_RS03515	PF12821	SH05_RS03515
SH05_RS03520	PF06738	SH05_RS03520
SH05_RS03525	PF00196	Bacterial regulatory proteins, luxR family
SH05_RS03530	PF00196	Bacterial regulatory proteins, luxR family
SH05_RS03535	PF06276	Ferric iron reductase FhuF-like transporter
SH05_RS03535	PF11575	SH05_RS03535
SH05_RS03540	PF07256	SH05_RS03540
SH05_RS03560	PF05175	Methyltransferase small domain
SH05_RS03560	PF08468	Methyltransferase small domain N-terminal
SH05_RS03565	PF03603	DNA polymerase III psi subunit
SH05_RS03570	PF00583	Acetyltransferase (GNAT) family
SH05_RS03575	PF13419	Haloacid dehalogenase-like hydrolase
SH05_RS03580	PF00009	Elongation factor Tu GTP binding domain
SH05_RS03580	PF03144	Elongation factor Tu domain 2
SH05_RS03580	PF16658	SH05_RS03580
SH05_RS03585	PF04972	BON domain
SH05_RS03590	PF07043	SH05_RS03590
SH05_RS03595	PF01734	Patatin-like phospholipase
SH05_RS03600	PF01026	TatD related DNase
SH05_RS03605	PF04055	Radical SAM superfamily
SH05_RS03605	PF13353	4Fe-4S single cluster domain
SH05_RS03610	PF11230	SH05_RS03610
SH05_RS03620	PF01791	DeoC/LacD family aldolase
SH05_RS03625	PF00591	Glycosyl transferase family, a/b domain
SH05_RS03625	PF02885	Glycosyl transferase family, helical bundle domain
SH05_RS03625	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
SH05_RS03630	PF01676	Metalloenzyme superfamily
SH05_RS03635	PF01048	Phosphorylase superfamily
SH05_RS03640	PF07804	HipA-like C-terminal domain
SH05_RS03640	PF07805	HipA-like N-terminal domain
SH05_RS03645	PF03099	Biotin/lipoate A/B protein ligase family
SH05_RS03645	PF10437	Bacterial lipoate protein ligase C-terminus
SH05_RS03650	PF10144	SH05_RS03650
SH05_RS03655	PF12710	haloacid dehalogenase-like hydrolase
SH05_RS03660	PF13481	AAA domain
SH05_RS03660	PF13541	Subunit ChlI of Mg-chelatase
SH05_RS03665	PF01381	Helix-turn-helix
SH05_RS03665	PF13521	AAA domain
SH05_RS03675	PF00005	ABC transporter
SH05_RS03675	PF12848	ABC transporter
SH05_RS03680	PF01464	Transglycosylase SLT domain
SH05_RS03680	PF14718	Soluble lytic murein transglycosylase L domain
SH05_RS03685	PF01371	Trp repressor protein
SH05_RS03690	PF01931	Protein of unknown function DUF84
SH05_RS03695	PF00300	Histidine phosphatase superfamily (branch 1)
SH05_RS03700	PF06445	GyrI-like small molecule binding domain
SH05_RS03700	PF12833	Helix-turn-helix domain
SH05_RS03705	PF05981	SH05_RS03705
SH05_RS03710	PF00072	Response regulator receiver domain
SH05_RS03710	PF00486	Transcriptional regulatory protein, C terminal
SH05_RS03715	PF00512	His Kinase A (phospho-acceptor) domain
SH05_RS03715	PF00672	HAMP domain
SH05_RS03715	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH05_RS03720	PF06123	SH05_RS03720
SH05_RS03725	PF00072	Response regulator receiver domain
SH05_RS03725	PF00486	Transcriptional regulatory protein, C terminal
SH05_RS03735	PF00588	SpoU rRNA Methylase family
SH05_RS03740	PF08254	SH05_RS03740
SH05_RS03745	PF00696	Amino acid kinase family
SH05_RS03745	PF00742	Homoserine dehydrogenase
SH05_RS03745	PF01842	ACT domain
SH05_RS03745	PF03447	Homoserine dehydrogenase, NAD binding domain
SH05_RS03745	PF13840	ACT domain
SH05_RS03750	PF00288	GHMP kinases N terminal domain
SH05_RS03750	PF08544	GHMP kinases C terminal
SH05_RS03755	PF00291	Pyridoxal-phosphate dependent enzyme
SH05_RS03755	PF14821	Threonine synthase N terminus
SH05_RS03765	PF10697	SH05_RS03765
SH05_RS03770	PF03883	SH05_RS03770
SH05_RS03775	PF01235	SH05_RS03775
SH05_RS03780	PF00923	Transaldolase
SH05_RS03785	PF00994	Probable molybdopterin binding domain
SH05_RS03790	PF01184	SH05_RS03790
SH05_RS03795	PF03981	SH05_RS03795
SH05_RS03795	PF13099	SH05_RS03795
SH05_RS03800	PF10807	SH05_RS03800
SH05_RS03805	PF00012	Hsp70 protein
SH05_RS03810	PF00226	DnaJ domain
SH05_RS03810	PF00684	DnaJ central domain
SH05_RS03810	PF01556	DnaJ C terminal domain
SH05_RS03815	PF01609	Transposase DDE domain
SH05_RS03820	PF01848	SH05_RS03820
SH05_RS03825	PF06965	Na+/H+ antiporter 1
SH05_RS03830	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS03830	PF03466	LysR substrate binding domain
SH05_RS03835	PF03400	SH05_RS03835
SH05_RS03840	PF01649	Ribosomal protein S20
SH05_RS03845	PF10837	SH05_RS03845
SH05_RS03850	PF01687	Riboflavin kinase
SH05_RS03850	PF06574	FAD synthetase
SH05_RS03855	PF00133	tRNA synthetases class I (I, L, M and V)
SH05_RS03855	PF06827	Zinc finger found in FPG and IleRS
SH05_RS03855	PF08264	Anticodon-binding domain of tRNA
SH05_RS03860	PF01252	SH05_RS03860
SH05_RS03865	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
SH05_RS03870	PF02401	LytB protein
SH05_RS03875	PF01156	Inosine-uridine preferring nucleoside hydrolase
SH05_RS03880	PF01113	Dihydrodipicolinate reductase, N-terminus
SH05_RS03880	PF05173	Dihydrodipicolinate reductase, C-terminus
SH05_RS03895	PF00117	Glutamine amidotransferase class-I
SH05_RS03895	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
SH05_RS03900	PF02142	MGS-like domain
SH05_RS03900	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
SH05_RS03900	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
SH05_RS03910	PF07180	Protein of unknown function (DUF1401)
SH05_RS03915	PF00132	Bacterial transferase hexapeptide (six repeats)
SH05_RS03920	PF00378	Enoyl-CoA hydratase/isomerase family
SH05_RS03925	PF00501	AMP-binding enzyme
SH05_RS03925	PF13193	AMP-binding enzyme C-terminal domain
SH05_RS03930	PF02515	CoA-transferase family III
SH05_RS03935	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
SH05_RS03935	PF02770	Acyl-CoA dehydrogenase, middle domain
SH05_RS03935	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
SH05_RS03940	PF02028	BCCT family transporter
SH05_RS03945	PF01012	Electron transfer flavoprotein domain
SH05_RS03950	PF00766	Electron transfer flavoprotein FAD-binding domain
SH05_RS03950	PF01012	Electron transfer flavoprotein domain
SH05_RS03955	PF01494	FAD binding domain
SH05_RS03965	PF00083	Sugar (and other) transporter
SH05_RS03970	PF02525	Flavodoxin-like fold
SH05_RS03975	PF00999	Sodium/hydrogen exchanger family
SH05_RS03975	PF02254	TrkA-N domain
SH05_RS03980	PF00186	Dihydrofolate reductase
SH05_RS03985	PF00149	Calcineurin-like phosphoesterase
SH05_RS03990	PF04379	Protein of unknown function (DUF525)
SH05_RS03995	PF00398	Ribosomal RNA adenine dimethylase
SH05_RS04000	PF04166	Pyridoxal phosphate biosynthetic protein PdxA
SH05_RS04005	PF00639	PPIC-type PPIASE domain
SH05_RS04005	PF09312	SurA N-terminal domain
SH05_RS04005	PF13616	PPIC-type PPIASE domain
SH05_RS04010	PF03968	OstA-like protein
SH05_RS04010	PF04453	Organic solvent tolerance protein
SH05_RS04015	PF00226	DnaJ domain
SH05_RS04015	PF05099	Tellurite resistance protein TerB
SH05_RS04025	PF00849	RNA pseudouridylate synthase
SH05_RS04030	PF00176	SNF2 family N-terminal domain
SH05_RS04030	PF00271	Helicase conserved C-terminal domain
SH05_RS04030	PF12137	RNA polymerase recycling family C-terminal
SH05_RS04035	PF00136	DNA polymerase family B
SH05_RS04035	PF03104	DNA polymerase family B, exonuclease domain
SH05_RS04040	PF00596	Class II Aldolase and Adducin N-terminal domain
SH05_RS04045	PF02610	L-arabinose isomerase
SH05_RS04045	PF11762	L-arabinose isomerase C-terminal domain
SH05_RS04050	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
SH05_RS04055	PF02311	AraC-like ligand binding domain
SH05_RS04055	PF12833	Helix-turn-helix domain
SH05_RS04060	PF09335	SH05_RS04060
SH05_RS04065	PF00005	ABC transporter
SH05_RS04070	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS04075	PF13343	Bacterial extracellular solute-binding protein
SH05_RS04080	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
SH05_RS04080	PF12793	SH05_RS04080
SH05_RS04085	PF15894	SH05_RS04085
SH05_RS04090	PF07690	Major Facilitator Superfamily
SH05_RS04095	PF00694	Aconitase C-terminal domain
SH05_RS04100	PF00330	Aconitase family (aconitate hydratase)
SH05_RS04105	PF00180	Isocitrate/isopropylmalate dehydrogenase
SH05_RS04110	PF00682	HMGL-like
SH05_RS04110	PF08502	LeuA allosteric (dimerisation) domain
SH05_RS04115	PF08054	SH05_RS04115
SH05_RS04120	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS04120	PF03466	LysR substrate binding domain
SH05_RS04125	PF00205	Thiamine pyrophosphate enzyme, central domain
SH05_RS04125	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
SH05_RS04125	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
SH05_RS04130	PF10369	Small subunit of acetolactate synthase
SH05_RS04130	PF13710	ACT domain
SH05_RS04140	PF00356	Bacterial regulatory proteins, lacI family
SH05_RS04140	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
SH05_RS04145	PF02381	MraZ protein
SH05_RS04150	PF01795	MraW methylase family
SH05_RS04155	PF04999	SH05_RS04155
SH05_RS04160	PF00905	Penicillin binding protein transpeptidase domain
SH05_RS04160	PF03717	Penicillin-binding Protein dimerisation domain
SH05_RS04165	PF01225	Mur ligase family, catalytic domain
SH05_RS04165	PF02875	Mur ligase family, glutamate ligase domain
SH05_RS04165	PF08245	Mur ligase middle domain
SH05_RS04170	PF01225	Mur ligase family, catalytic domain
SH05_RS04170	PF02875	Mur ligase family, glutamate ligase domain
SH05_RS04170	PF08245	Mur ligase middle domain
SH05_RS04175	PF00953	Glycosyl transferase family 4
SH05_RS04175	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1
SH05_RS04180	PF02875	Mur ligase family, glutamate ligase domain
SH05_RS04180	PF08245	Mur ligase middle domain
SH05_RS04185	PF01098	SH05_RS04185
SH05_RS04190	PF03033	Glycosyltransferase family 28 N-terminal domain
SH05_RS04190	PF04101	Glycosyltransferase family 28 C-terminal domain
SH05_RS04195	PF01225	Mur ligase family, catalytic domain
SH05_RS04195	PF02875	Mur ligase family, glutamate ligase domain
SH05_RS04195	PF08245	Mur ligase middle domain
SH05_RS04200	PF01820	D-ala D-ala ligase N-terminus
SH05_RS04200	PF07478	D-ala D-ala ligase C-terminus
SH05_RS04205	PF03799	Cell division protein FtsQ
SH05_RS04205	PF08478	POTRA domain, FtsQ-type
SH05_RS04210	PF02491	SHS2 domain inserted in FTSA
SH05_RS04210	PF14450	Cell division protein FtsA
SH05_RS04215	PF00091	Tubulin/FtsZ family, GTPase domain
SH05_RS04215	PF12327	FtsZ family, C-terminal domain
SH05_RS04220	PF03331	UDP-3-O-acyl N-acetylglycosamine deacetylase
SH05_RS04225	PF06558	SH05_RS04225
SH05_RS04230	PF01043	SecA preprotein cross-linking domain
SH05_RS04230	PF02810	SEC-C motif
SH05_RS04230	PF07516	SecA Wing and Scaffold domain
SH05_RS04230	PF07517	SecA DEAD-like domain
SH05_RS04235	PF00293	NUDIX domain
SH05_RS04245	PF03884	Domain of unknown function (DUF329)
SH05_RS04250	PF07072	Protein of unknown function (DUF1342)
SH05_RS04255	PF01121	Dephospho-CoA kinase
SH05_RS04260	PF00478	IMP dehydrogenase / GMP reductase domain
SH05_RS04265	PF00482	Type II secretion system (T2SS), protein F
SH05_RS04270	PF00437	Type II/IV secretion system protein
SH05_RS04270	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
SH05_RS04275	PF13633	Prokaryotic N-terminal methylation site
SH05_RS04285	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
SH05_RS04285	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
SH05_RS04290	PF01510	N-acetylmuramoyl-L-alanine amidase
SH05_RS04295	PF17113	SH05_RS04295
SH05_RS04300	PF00324	Amino acid permease
SH05_RS04305	PF00392	Bacterial regulatory proteins, gntR family
SH05_RS04305	PF07729	FCD domain
SH05_RS04310	PF00456	Transketolase, thiamine diphosphate binding domain
SH05_RS04315	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
SH05_RS04315	PF00364	Biotin-requiring enzyme
SH05_RS04315	PF02817	e3 binding domain
SH05_RS04320	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
SH05_RS04320	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SH05_RS04325	PF11737	SH05_RS04325
SH05_RS04330	PF00330	Aconitase family (aconitate hydratase)
SH05_RS04330	PF06434	Aconitate hydratase 2 N-terminus
SH05_RS04330	PF11791	Aconitate B N-terminal domain
SH05_RS04335	PF06062	SH05_RS04335
SH05_RS04340	PF02675	S-adenosylmethionine decarboxylase
SH05_RS04345	PF01564	Spermine/spermidine synthase
SH05_RS04350	PF09691	Bacterial chaperone lipoprotein (PulS_OutS)
SH05_RS04355	PF00394	Multicopper oxidase
SH05_RS04355	PF07731	Multicopper oxidase
SH05_RS04355	PF07732	Multicopper oxidase
SH05_RS04360	PF01011	PQQ enzyme repeat
SH05_RS04365	PF00156	Phosphoribosyl transferase domain
SH05_RS04370	PF00484	Carbonic anhydrase
SH05_RS04375	PF00005	ABC transporter
SH05_RS04380	PF01061	SH05_RS04380
SH05_RS04385	PF03610	PTS system fructose IIA component
SH05_RS04390	PF01522	Polysaccharide deacetylase
SH05_RS04395	PF02261	Aspartate decarboxylase
SH05_RS04400	PF04754	SH05_RS04400
SH05_RS04405	PF02569	Pantoate-beta-alanine ligase
SH05_RS04410	PF02548	Ketopantoate hydroxymethyltransferase
SH05_RS04415	PF00419	Fimbrial protein
SH05_RS04420	PF00419	Fimbrial protein
SH05_RS04425	PF00419	Fimbrial protein
SH05_RS04430	PF00419	Fimbrial protein
SH05_RS04435	PF00577	Outer membrane usher protein
SH05_RS04435	PF13953	PapC C-terminal domain
SH05_RS04435	PF13954	PapC N-terminal domain
SH05_RS04440	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
SH05_RS04440	PF02753	Pili assembly chaperone PapD, C-terminal domain
SH05_RS04445	PF00419	Fimbrial protein
SH05_RS04450	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
SH05_RS04455	PF01743	Poly A polymerase head domain
SH05_RS04455	PF12626	Polymerase A arginine-rich C-terminus
SH05_RS04455	PF12627	Probable RNA and SrmB- binding site of polymerase A
SH05_RS04460	PF00749	tRNA synthetases class I (E and Q), catalytic domain
SH05_RS04465	PF01258	Prokaryotic dksA/traR C4-type zinc finger
SH05_RS04470	PF03749	Sugar fermentation stimulation protein
SH05_RS04475	PF02834	LigT like Phosphoesterase
SH05_RS04480	PF00270	DEAD/DEAH box helicase
SH05_RS04480	PF00271	Helicase conserved C-terminal domain
SH05_RS04480	PF04408	Helicase associated domain (HA2)
SH05_RS04480	PF08482	SH05_RS04480
SH05_RS04490	PF00905	Penicillin binding protein transpeptidase domain
SH05_RS04490	PF00912	Transglycosylase
SH05_RS04490	PF14812	SH05_RS04490
SH05_RS04490	PF14814	Bifunctional transglycosylase second domain
SH05_RS04495	PF07715	TonB-dependent Receptor Plug Domain
SH05_RS04500	PF00665	Integrase core domain
SH05_RS04500	PF13276	SH05_RS04500
SH05_RS04505	PF01527	Transposase
SH05_RS04510	PF00593	TonB dependent receptor
SH05_RS04510	PF07715	TonB-dependent Receptor Plug Domain
SH05_RS04515	PF00005	ABC transporter
SH05_RS04520	PF01497	Periplasmic binding protein
SH05_RS04525	PF01032	FecCD transport family
SH05_RS04530	PF00202	Aminotransferase class-III
SH05_RS04535	PF00654	Voltage gated chloride channel
SH05_RS04540	PF01521	Iron-sulphur cluster biosynthesis
SH05_RS04545	PF03458	SH05_RS04545
SH05_RS04550	PF01497	Periplasmic binding protein
SH05_RS04555	PF01048	Phosphorylase superfamily
SH05_RS04560	PF01966	HD domain
SH05_RS04565	PF00595	PDZ domain (Also known as DHR or GLGF)
SH05_RS04565	PF13365	Trypsin-like peptidase domain
SH05_RS04570	PF05651	SH05_RS04570
SH05_RS04570	PF13556	PucR C-terminal helix-turn-helix domain
SH05_RS04575	PF11944	SH05_RS04575
SH05_RS04580	PF00149	Calcineurin-like phosphoesterase
SH05_RS04585	PF00132	Bacterial transferase hexapeptide (six repeats)
SH05_RS04585	PF14602	Hexapeptide repeat of succinyl-transferase
SH05_RS04585	PF14805	Tetrahydrodipicolinate N-succinyltransferase N-terminal
SH05_RS04590	PF01842	ACT domain
SH05_RS04590	PF01909	Nucleotidyltransferase domain
SH05_RS04590	PF01966	HD domain
SH05_RS04590	PF08335	GlnD PII-uridylyltransferase
SH05_RS04595	PF00557	Metallopeptidase family M24
SH05_RS04600	PF00318	Ribosomal protein S2
SH05_RS04605	PF00889	Elongation factor TS
SH05_RS04610	PF00696	Amino acid kinase family
SH05_RS04615	PF01765	Ribosome recycling factor
SH05_RS04620	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
SH05_RS04620	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal
SH05_RS04620	PF13288	DXP reductoisomerase C-terminal domain
SH05_RS04625	PF01255	Putative undecaprenyl diphosphate synthase
SH05_RS04630	PF01148	Cytidylyltransferase family
SH05_RS04635	PF00595	PDZ domain (Also known as DHR or GLGF)
SH05_RS04635	PF02163	Peptidase family M50
SH05_RS04640	PF01103	Surface antigen
SH05_RS04640	PF07244	Surface antigen variable number repeat
SH05_RS04645	PF03938	Outer membrane protein (OmpH-like)
SH05_RS04650	PF00132	Bacterial transferase hexapeptide (six repeats)
SH05_RS04650	PF04613	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD
SH05_RS04650	PF14602	Hexapeptide repeat of succinyl-transferase
SH05_RS04655	PF07977	FabA-like domain
SH05_RS04660	PF00132	Bacterial transferase hexapeptide (six repeats)
SH05_RS04660	PF13720	Udp N-acetylglucosamine O-acyltransferase; Domain 2
SH05_RS04665	PF02684	SH05_RS04665
SH05_RS04670	PF01351	Ribonuclease HII
SH05_RS04675	PF01336	OB-fold nucleic acid binding domain
SH05_RS04675	PF02811	PHP domain
SH05_RS04675	PF07733	Bacterial DNA polymerase III alpha subunit
SH05_RS04675	PF14579	Helix-hairpin-helix motif
SH05_RS04680	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
SH05_RS04685	PF01276	Orn/Lys/Arg decarboxylase, major domain
SH05_RS04685	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
SH05_RS04685	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
SH05_RS04690	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
SH05_RS04695	PF01171	PP-loop family
SH05_RS04695	PF09179	TilS substrate binding domain
SH05_RS04695	PF11734	TilS substrate C-terminal domain
SH05_RS04700	PF07073	Modulator of Rho-dependent transcription termination (ROF)
SH05_RS04705	PF06786	SH05_RS04705
SH05_RS04710	PF07152	YaeQ protein
SH05_RS04715	PF00472	RF-1 domain
SH05_RS04720	PF04170	NlpE N-terminal domain
SH05_RS04720	PF17185	SH05_RS04720
SH05_RS04725	PF05708	Orthopoxvirus protein of unknown function (DUF830)
SH05_RS04730	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
SH05_RS04730	PF03129	Anticodon binding domain
SH05_RS04730	PF04073	Aminoacyl-tRNA editing domain
SH05_RS04735	PF01980	Uncharacterised protein family UPF0066
SH05_RS04740	PF16358	SH05_RS04740
SH05_RS04745	PF03180	NLPA lipoprotein
SH05_RS04750	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS04755	PF00005	ABC transporter
SH05_RS04755	PF09383	NIL domain
SH05_RS04760	PF13242	HAD-hyrolase-like
SH05_RS04795	PF00248	Aldo/keto reductase family
SH05_RS04800	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS04800	PF03466	LysR substrate binding domain
SH05_RS04805	PF03372	Endonuclease/Exonuclease/phosphatase family
SH05_RS04810	PF08241	Methyltransferase domain
SH05_RS04815	PF01464	Transglycosylase SLT domain
SH05_RS04815	PF01476	LysM domain
SH05_RS04820	PF00753	Metallo-beta-lactamase superfamily
SH05_RS04820	PF16123	SH05_RS04820
SH05_RS04825	PF08241	Methyltransferase domain
SH05_RS04830	PF00075	RNase H
SH05_RS04835	PF00929	Exonuclease
SH05_RS04865	PF00795	Carbon-nitrogen hydrolase
SH05_RS04870	PF08816	Inhibitor of vertebrate lysozyme (Ivy)
SH05_RS04875	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
SH05_RS04875	PF02770	Acyl-CoA dehydrogenase, middle domain
SH05_RS04875	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
SH05_RS04875	PF09317	SH05_RS04875
SH05_RS04880	PF13580	SIS domain
SH05_RS04885	PF13230	Glutamine amidotransferases class-II
SH05_RS04890	PF03734	L,D-transpeptidase catalytic domain
SH05_RS04895	PF15738	SH05_RS04895
SH05_RS04900	PF04221	RelB antitoxin
SH05_RS04905	PF00877	NlpC/P60 family
SH05_RS04915	PF00771	FHIPEP family
SH05_RS04920	PF00691	OmpA family
SH05_RS04925	PF00817	impB/mucB/samB family
SH05_RS04925	PF11798	IMS family HHH motif
SH05_RS04925	PF11799	impB/mucB/samB family C-terminal domain
SH05_RS04930	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
SH05_RS04935	PF13957	SH05_RS04935
SH05_RS04940	PF13673	Acetyltransferase (GNAT) domain
SH05_RS04950	PF00472	RF-1 domain
SH05_RS04955	PF01546	Peptidase family M20/M25/M40
SH05_RS04955	PF07687	Peptidase dimerisation domain
SH05_RS04960	PF00156	Phosphoribosyl transferase domain
SH05_RS04965	PF06500	Alpha/beta hydrolase of unknown function (DUF1100)
SH05_RS04970	PF07417	Transcriptional regulator Crl
SH05_RS04975	PF00267	Gram-negative porin
SH05_RS04980	PF00696	Amino acid kinase family
SH05_RS04980	PF01472	PUA domain
SH05_RS04985	PF00171	Aldehyde dehydrogenase family
SH05_RS04995	PF06755	SH05_RS04995
SH05_RS05000	PF06154	YagB/YeeU/YfjZ family
SH05_RS05005	PF04002	RadC-like JAB domain
SH05_RS05010	PF03230	Antirestriction protein
SH05_RS05015	PF06006	Bacterial protein of unknown function (DUF905)
SH05_RS05035	PF06067	SH05_RS05035
SH05_RS05040	PF01926	50S ribosome-binding GTPase
SH05_RS05045	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS05045	PF03466	LysR substrate binding domain
SH05_RS05050	PF01527	Transposase
SH05_RS05055	PF00665	Integrase core domain
SH05_RS05055	PF13936	Helix-turn-helix domain
SH05_RS05075	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)
SH05_RS05080	PF01609	Transposase DDE domain
SH05_RS05080	PF05598	SH05_RS05080
SH05_RS05085	PF00324	Amino acid permease
SH05_RS05090	PF02574	Homocysteine S-methyltransferase
SH05_RS05095	PF00005	ABC transporter
SH05_RS05095	PF08402	TOBE domain
SH05_RS05100	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS05105	PF03400	SH05_RS05105
SH05_RS05110	PF03811	SH05_RS05110
SH05_RS05110	PF12759	SH05_RS05110
SH05_RS05115	PF01527	Transposase
SH05_RS05120	PF06154	YagB/YeeU/YfjZ family
SH05_RS05125	PF00665	Integrase core domain
SH05_RS05125	PF13565	SH05_RS05125
SH05_RS05130	PF00701	Dihydrodipicolinate synthetase family
SH05_RS05135	PF00920	Dehydratase family
SH05_RS05140	PF13347	MFS/sugar transport protein
SH05_RS05145	PF04616	Glycosyl hydrolases family 43
SH05_RS05145	PF07081	Protein of unknown function (DUF1349)
SH05_RS05150	PF01614	Bacterial transcriptional regulator
SH05_RS05150	PF09339	IclR helix-turn-helix domain
SH05_RS05155	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
SH05_RS05155	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
SH05_RS05160	PF03400	SH05_RS05160
SH05_RS05170	PF11726	SH05_RS05170
SH05_RS05175	PF07638	ECF sigma factor
SH05_RS05195	PF00589	Phage integrase family
SH05_RS05195	PF13356	Domain of unknown function (DUF4102)
SH05_RS05205	PF03466	LysR substrate binding domain
SH05_RS05210	PF02625	XdhC and CoxI family
SH05_RS05210	PF13478	XdhC Rossmann domain
SH05_RS05215	PF01315	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
SH05_RS05215	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
SH05_RS05220	PF00941	FAD binding domain in molybdopterin dehydrogenase
SH05_RS05220	PF03450	CO dehydrogenase flavoprotein C-terminal domain
SH05_RS05225	PF00111	2Fe-2S iron-sulfur cluster binding domain
SH05_RS05225	PF01799	[2Fe-2S] binding domain
SH05_RS05230	PF07274	SH05_RS05230
SH05_RS05235	PF03692	SH05_RS05235
SH05_RS05250	PF15976	SH05_RS05250
SH05_RS05250	PF16967	SH05_RS05250
SH05_RS05260	PF16449	SH05_RS05260
SH05_RS05265	PF00196	Bacterial regulatory proteins, luxR family
SH05_RS05275	PF00444	Ribosomal protein L36
SH05_RS05280	PF01197	Ribosomal protein L31
SH05_RS05290	PF11924	Protein of unknown function (DUF3442)
SH05_RS05295	PF01527	Transposase
SH05_RS05300	PF00665	Integrase core domain
SH05_RS05300	PF13276	SH05_RS05300
SH05_RS05305	PF12833	Helix-turn-helix domain
SH05_RS05310	PF04224	SH05_RS05310
SH05_RS05315	PF07338	Protein of unknown function (DUF1471)
SH05_RS05320	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
SH05_RS05320	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SH05_RS05325	PF12833	Helix-turn-helix domain
SH05_RS05325	PF12852	Cupin
SH05_RS05330	PF02754	SH05_RS05330
SH05_RS05335	PF02589	Uncharacterised ACR, YkgG family COG1556
SH05_RS05335	PF11870	SH05_RS05335
SH05_RS05335	PF13183	4Fe-4S dicluster domain
SH05_RS05340	PF02589	Uncharacterised ACR, YkgG family COG1556
SH05_RS05355	PF00732	GMC oxidoreductase
SH05_RS05355	PF05199	GMC oxidoreductase
SH05_RS05360	PF00171	Aldehyde dehydrogenase family
SH05_RS05365	PF00440	Bacterial regulatory proteins, tetR family
SH05_RS05365	PF13977	Bacterial transcriptional repressor
SH05_RS05370	PF02028	BCCT family transporter
SH05_RS05380	PF00196	Bacterial regulatory proteins, luxR family
SH05_RS05380	PF00563	EAL domain
SH05_RS05385	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS05385	PF03466	LysR substrate binding domain
SH05_RS05390	PF06496	SH05_RS05390
SH05_RS05395	PF12796	Ankyrin repeats (3 copies)
SH05_RS05395	PF13637	Ankyrin repeats (many copies)
SH05_RS05400	PF11392	SH05_RS05400
SH05_RS05405	PF00549	CoA-ligase
SH05_RS05405	PF02629	CoA binding domain
SH05_RS05410	PF06545	Protein of unknown function (DUF1116)
SH05_RS05415	PF15954	SH05_RS05415
SH05_RS05420	PF00696	Amino acid kinase family
SH05_RS05425	PF07969	Amidohydrolase family
SH05_RS05430	PF00107	Zinc-binding dehydrogenase
SH05_RS05430	PF08240	Alcohol dehydrogenase GroES-like domain
SH05_RS05445	PF01810	SH05_RS05445
SH05_RS05450	PF07338	Protein of unknown function (DUF1471)
SH05_RS05455	PF00158	Sigma-54 interaction domain
SH05_RS05455	PF02954	Bacterial regulatory protein, Fis family
SH05_RS05455	PF06506	Propionate catabolism activator
SH05_RS05460	PF13714	Phosphoenolpyruvate phosphomutase
SH05_RS05465	PF00285	Citrate synthase
SH05_RS05470	PF03972	MmgE/PrpD family
SH05_RS05475	PF00501	AMP-binding enzyme
SH05_RS05475	PF13193	AMP-binding enzyme C-terminal domain
SH05_RS05475	PF16177	SH05_RS05475
SH05_RS05480	PF02133	Permease for cytosine/purines, uracil, thiamine, allantoin
SH05_RS05485	PF07969	Amidohydrolase family
SH05_RS05490	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS05490	PF03466	LysR substrate binding domain
SH05_RS05495	PF00484	Carbonic anhydrase
SH05_RS05500	PF02560	Cyanate lyase C-terminal domain
SH05_RS05505	PF07690	Major Facilitator Superfamily
SH05_RS05510	PF00132	Bacterial transferase hexapeptide (six repeats)
SH05_RS05510	PF12464	Maltose acetyltransferase
SH05_RS05510	PF14602	Hexapeptide repeat of succinyl-transferase
SH05_RS05515	PF01306	LacY proton/sugar symporter
SH05_RS05520	PF02837	Glycosyl hydrolases family 2, sugar binding domain
SH05_RS05525	PF13377	Periplasmic binding protein-like domain
SH05_RS05530	PF01614	Bacterial transcriptional regulator
SH05_RS05530	PF09339	IclR helix-turn-helix domain
SH05_RS05535	PF01494	FAD binding domain
SH05_RS05540	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
SH05_RS05545	PF12697	Alpha/beta hydrolase family
SH05_RS05550	PF01557	Fumarylacetoacetate (FAA) hydrolase family
SH05_RS05555	PF01118	Semialdehyde dehydrogenase, NAD binding domain
SH05_RS05555	PF09290	Prokaryotic acetaldehyde dehydrogenase, dimerisation
SH05_RS05560	PF00682	HMGL-like
SH05_RS05560	PF07836	DmpG-like communication domain
SH05_RS05565	PF07690	Major Facilitator Superfamily
SH05_RS05570	PF09831	SH05_RS05570
SH05_RS05575	PF00756	Putative esterase
SH05_RS05580	PF00107	Zinc-binding dehydrogenase
SH05_RS05580	PF08240	Alcohol dehydrogenase GroES-like domain
SH05_RS05585	PF02583	Metal-sensitive transcriptional repressor
SH05_RS05595	PF00132	Bacterial transferase hexapeptide (six repeats)
SH05_RS05600	PF01527	Transposase
SH05_RS05605	PF00665	Integrase core domain
SH05_RS05605	PF13276	SH05_RS05605
SH05_RS05610	PF00535	Glycosyl transferase family 2
SH05_RS05615	PF02585	GlcNAc-PI de-N-acetylase
SH05_RS05620	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
SH05_RS05625	PF00005	ABC transporter
SH05_RS05630	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS05635	PF02668	Taurine catabolism dioxygenase TauD, TfdA family
SH05_RS05640	PF00490	Delta-aminolevulinic acid dehydratase
SH05_RS05655	PF00665	Integrase core domain
SH05_RS05655	PF13276	SH05_RS05655
SH05_RS05660	PF01527	Transposase
SH05_RS05665	PF03212	Pertactin
SH05_RS05665	PF03797	Autotransporter beta-domain
SH05_RS05670	PF15977	SH05_RS05670
SH05_RS05675	PF00144	Beta-lactamase
SH05_RS05685	PF05992	SH05_RS05685
SH05_RS05690	PF07759	SH05_RS05690
SH05_RS05695	PF10954	SH05_RS05695
SH05_RS05700	PF10953	SH05_RS05700
SH05_RS05705	PF01820	D-ala D-ala ligase N-terminus
SH05_RS05705	PF07478	D-ala D-ala ligase C-terminus
SH05_RS05715	PF10796	SH05_RS05715
SH05_RS05720	PF00245	Alkaline phosphatase
SH05_RS05725	PF07769	SH05_RS05725
SH05_RS05730	PF00990	GGDEF domain
SH05_RS05730	PF05230	SH05_RS05730
SH05_RS05735	PF03807	NADP oxidoreductase coenzyme F420-dependent
SH05_RS05735	PF14748	Pyrroline-5-carboxylate reductase dimerisation
SH05_RS05740	PF02639	SH05_RS05740
SH05_RS05745	PF01202	Shikimate kinase
SH05_RS05750	PF16362	SH05_RS05750
SH05_RS05760	PF07302	SH05_RS05760
SH05_RS05765	PF06865	Protein of unknown function (DUF1255)
SH05_RS05770	PF10971	SH05_RS05770
SH05_RS05775	PF04381	Putative exonuclease, RdgC
SH05_RS05780	PF00480	ROK family
SH05_RS05785	PF07690	Major Facilitator Superfamily
SH05_RS05790	PF13476	AAA domain
SH05_RS05790	PF13558	Putative exonuclease SbcCD, C subunit
SH05_RS05795	PF00149	Calcineurin-like phosphoesterase
SH05_RS05795	PF12320	Type 5 capsule protein repressor C-terminal domain
SH05_RS05800	PF00072	Response regulator receiver domain
SH05_RS05800	PF00486	Transcriptional regulatory protein, C terminal
SH05_RS05805	PF00512	His Kinase A (phospho-acceptor) domain
SH05_RS05805	PF00989	PAS fold
SH05_RS05805	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH05_RS05805	PF11808	SH05_RS05805
SH05_RS05810	PF05525	SH05_RS05810
SH05_RS05815	PF00324	Amino acid permease
SH05_RS05820	PF00128	Alpha amylase, catalytic domain
SH05_RS05820	PF02903	Alpha amylase, N-terminal ig-like domain
SH05_RS05825	PF04336	SH05_RS05825
SH05_RS05830	PF02547	Queuosine biosynthesis protein
SH05_RS05835	PF01702	Queuine tRNA-ribosyltransferase
SH05_RS05840	PF02699	Preprotein translocase subunit
SH05_RS05845	PF02355	Protein export membrane protein
SH05_RS05845	PF07549	SecD/SecF GG Motif
SH05_RS05845	PF13721	SecD export protein N-terminal TM region
SH05_RS05850	PF02355	Protein export membrane protein
SH05_RS05850	PF07549	SecD/SecF GG Motif
SH05_RS05855	PF01844	HNH endonuclease
SH05_RS05860	PF12035	SH05_RS05860
SH05_RS05865	PF03502	Nucleoside-specific channel-forming protein, Tsx
SH05_RS05870	PF11622	Protein of unknown function (DUF3251)
SH05_RS05875	PF03477	ATP cone domain
SH05_RS05880	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
SH05_RS05880	PF01872	RibD C-terminal domain
SH05_RS05885	PF00885	6,7-dimethyl-8-ribityllumazine synthase
SH05_RS05890	PF01029	NusB family
SH05_RS05895	PF00586	AIR synthase related protein, N-terminal domain
SH05_RS05895	PF02769	AIR synthase related protein, C-terminal domain
SH05_RS05900	PF04608	Phosphatidylglycerophosphatase A
SH05_RS05905	PF00248	Aldo/keto reductase family
SH05_RS05910	PF02779	Transketolase, pyrimidine binding domain
SH05_RS05910	PF02780	Transketolase, C-terminal domain
SH05_RS05910	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
SH05_RS05915	PF00348	Polyprenyl synthetase
SH05_RS05920	PF02609	Exonuclease VII small subunit
SH05_RS05925	PF02568	Thiamine biosynthesis protein (ThiI)
SH05_RS05925	PF02926	THUMP domain
SH05_RS05930	PF01965	DJ-1/PfpI family
SH05_RS05935	PF02558	Ketopantoate reductase PanE/ApbA
SH05_RS05935	PF08546	Ketopantoate reductase PanE/ApbA C terminal
SH05_RS05940	PF04461	Protein of unknown function (DUF520)
SH05_RS05945	PF07690	Major Facilitator Superfamily
SH05_RS05950	PF01040	UbiA prenyltransferase family
SH05_RS05955	PF03626	SH05_RS05955
SH05_RS05960	PF00510	Cytochrome c oxidase subunit III
SH05_RS05965	PF00115	Cytochrome C and Quinol oxidase polypeptide I
SH05_RS05970	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
SH05_RS05970	PF06481	COX Aromatic Rich Motif
SH05_RS05975	PF07690	Major Facilitator Superfamily
SH05_RS05980	PF03923	SH05_RS05980
SH05_RS05980	PF08139	SH05_RS05980
SH05_RS05985	PF01722	BolA-like protein
SH05_RS05995	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
SH05_RS05995	PF05697	Bacterial trigger factor protein (TF)
SH05_RS05995	PF05698	Bacterial trigger factor protein (TF) C-terminus
SH05_RS06000	PF00574	Clp protease
SH05_RS06005	PF06689	ClpX C4-type zinc finger
SH05_RS06005	PF07724	AAA domain (Cdc48 subfamily)
SH05_RS06005	PF10431	C-terminal, D2-small domain, of ClpB protein
SH05_RS06010	PF00004	ATPase family associated with various cellular activities (AAA)
SH05_RS06010	PF02190	ATP-dependent protease La (LON) domain
SH05_RS06010	PF05362	Lon protease (S16) C-terminal proteolytic domain
SH05_RS06015	PF00216	Bacterial DNA-binding protein
SH05_RS06020	PF13145	PPIC-type PPIASE domain
SH05_RS06020	PF13624	SurA N-terminal domain
SH05_RS06025	PF12836	Helix-hairpin-helix motif
SH05_RS06030	PF13279	Thioesterase-like superfamily
SH05_RS06035	PF06508	Queuosine biosynthesis protein QueC
SH05_RS06040	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
SH05_RS06040	PF12793	SH05_RS06040
SH05_RS06045	PF08282	haloacid dehalogenase-like hydrolase
SH05_RS06050	PF01037	AsnC family
SH05_RS06050	PF13404	AsnC-type helix-turn-helix domain
SH05_RS06055	PF00005	ABC transporter
SH05_RS06055	PF00664	ABC transporter transmembrane region
SH05_RS06060	PF00005	ABC transporter
SH05_RS06060	PF00664	ABC transporter transmembrane region
SH05_RS06065	PF00543	Nitrogen regulatory protein P-II
SH05_RS06070	PF00909	Ammonium Transporter Family
SH05_RS06075	PF13622	Thioesterase-like superfamily
SH05_RS06080	PF09619	Type III secretion system lipoprotein chaperone (YscW)
SH05_RS06085	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
SH05_RS06090	PF07237	Protein of unknown function (DUF1428)
SH05_RS06095	PF00563	EAL domain
SH05_RS06095	PF12792	SH05_RS06095
SH05_RS06100	PF10777	SH05_RS06100
SH05_RS06105	PF12464	Maltose acetyltransferase
SH05_RS06105	PF14602	Hexapeptide repeat of succinyl-transferase
SH05_RS06110	PF05321	Haemolysin expression modulating protein
SH05_RS06115	PF10757	SH05_RS06115
SH05_RS06120	PF00873	AcrB/AcrD/AcrF family
SH05_RS06125	PF00529	HlyD family secretion protein
SH05_RS06125	PF16576	SH05_RS06125
SH05_RS06130	PF00440	Bacterial regulatory proteins, tetR family
SH05_RS06130	PF08361	MAATS-type transcriptional repressor, C-terminal region
SH05_RS06135	PF00924	Mechanosensitive ion channel
SH05_RS06135	PF12794	SH05_RS06135
SH05_RS06135	PF12795	SH05_RS06135
SH05_RS06140	PF12035	SH05_RS06140
SH05_RS06145	PF10689	SH05_RS06145
SH05_RS06150	PF07445	Primosomal replication protein priB and priC
SH05_RS06155	PF04304	SH05_RS06155
SH05_RS06160	PF00156	Phosphoribosyl transferase domain
SH05_RS06165	PF12168	SH05_RS06165
SH05_RS06165	PF12169	DNA polymerase III subunits gamma and tau domain III
SH05_RS06165	PF12170	DNA polymerase III tau subunit V interacting with alpha
SH05_RS06165	PF13177	DNA polymerase III, delta subunit
SH05_RS06170	PF02575	YbaB/EbfC DNA-binding family
SH05_RS06175	PF02132	RecR protein
SH05_RS06175	PF13662	Toprim domain
SH05_RS06180	PF00183	Hsp90 protein
SH05_RS06180	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH05_RS06185	PF00406	Adenylate kinase
SH05_RS06185	PF05191	Adenylate kinase, active site lid
SH05_RS06190	PF00762	Ferrochelatase
SH05_RS06195	PF07859	alpha/beta hydrolase fold
SH05_RS06200	PF00294	pfkB family carbohydrate kinase
SH05_RS06205	PF00999	Sodium/hydrogen exchanger family
SH05_RS06205	PF02254	TrkA-N domain
SH05_RS06210	PF07690	Major Facilitator Superfamily
SH05_RS06215	PF00149	Calcineurin-like phosphoesterase
SH05_RS06215	PF02872	5'-nucleotidase, C-terminal domain
SH05_RS06220	PF04073	Aminoacyl-tRNA editing domain
SH05_RS06225	PF01963	SH05_RS06225
SH05_RS06230	PF01381	Helix-turn-helix
SH05_RS06235	PF00122	E1-E2 ATPase
SH05_RS06235	PF00403	Heavy-metal-associated domain
SH05_RS06235	PF00702	haloacid dehalogenase-like hydrolase
SH05_RS06240	PF04960	Glutaminase
SH05_RS06245	PF13520	Amino acid permease
SH05_RS06250	PF13411	MerR HTH family regulatory protein
SH05_RS06255	PF01957	NfeD-like C-terminal, partner-binding
SH05_RS06260	PF01145	SPFH domain / Band 7 family
SH05_RS06260	PF16200	SH05_RS06260
SH05_RS06265	PF00005	ABC transporter
SH05_RS06270	PF03649	SH05_RS06270
SH05_RS06275	PF00085	Thioredoxin
SH05_RS06275	PF14559	Tetratricopeptide repeat
SH05_RS06275	PF14561	Tetratricopeptide repeat
SH05_RS06280	PF00106	short chain dehydrogenase
SH05_RS06285	PF13472	GDSL-like Lipase/Acylhydrolase family
SH05_RS06290	PF00005	ABC transporter
SH05_RS06295	PF02687	SH05_RS06295
SH05_RS06300	PF03527	SH05_RS06300
SH05_RS06300	PF05593	SH05_RS06300
SH05_RS06300	PF14220	SH05_RS06300
SH05_RS06305	PF15631	SH05_RS06305
SH05_RS06310	PF03527	SH05_RS06310
SH05_RS06320	PF13551	Winged helix-turn helix
SH05_RS06330	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS06330	PF03466	LysR substrate binding domain
SH05_RS06335	PF04115	Ureidoglycolate hydrolase
SH05_RS06340	PF01614	Bacterial transcriptional regulator
SH05_RS06340	PF09339	IclR helix-turn-helix domain
SH05_RS06345	PF00205	Thiamine pyrophosphate enzyme, central domain
SH05_RS06345	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
SH05_RS06345	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
SH05_RS06350	PF01261	Xylose isomerase-like TIM barrel
SH05_RS06355	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
SH05_RS06355	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
SH05_RS06360	PF02133	Permease for cytosine/purines, uracil, thiamine, allantoin
SH05_RS06365	PF01979	Amidohydrolase family
SH05_RS06370	PF00860	Permease family
SH05_RS06375	PF02595	Glycerate kinase family
SH05_RS06380	PF05899	Protein of unknown function (DUF861)
SH05_RS06380	PF07883	Cupin domain
SH05_RS06385	PF01546	Peptidase family M20/M25/M40
SH05_RS06390	PF02615	Malate/L-lactate dehydrogenase
SH05_RS06395	PF00549	CoA-ligase
SH05_RS06395	PF02629	CoA binding domain
SH05_RS06400	PF06545	Protein of unknown function (DUF1116)
SH05_RS06405	PF11392	SH05_RS06405
SH05_RS06410	PF00696	Amino acid kinase family
SH05_RS06415	PF02222	ATP-grasp domain
SH05_RS06420	PF00731	AIR carboxylase
SH05_RS06425	PF12850	Calcineurin-like phosphoesterase superfamily domain
SH05_RS06430	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
SH05_RS06435	PF01406	tRNA synthetases class I (C) catalytic domain
SH05_RS06435	PF09190	DALR domain
SH05_RS06440	PF04307	SH05_RS06440
SH05_RS06445	PF13275	S4 domain
SH05_RS06450	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
SH05_RS06450	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
SH05_RS06455	PF00419	Fimbrial protein
SH05_RS06460	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
SH05_RS06460	PF02753	Pili assembly chaperone PapD, C-terminal domain
SH05_RS06465	PF00577	Outer membrane usher protein
SH05_RS06465	PF13953	PapC C-terminal domain
SH05_RS06465	PF13954	PapC N-terminal domain
SH05_RS06470	PF00419	Fimbrial protein
SH05_RS06475	PF00419	Fimbrial protein
SH05_RS06480	PF00072	Response regulator receiver domain
SH05_RS06480	PF00196	Bacterial regulatory proteins, luxR family
SH05_RS06490	PF00589	Phage integrase family
SH05_RS06500	PF06992	SH05_RS06500
SH05_RS06510	PF01527	Transposase
SH05_RS06515	PF00665	Integrase core domain
SH05_RS06515	PF13276	SH05_RS06515
SH05_RS06525	PF00893	Small Multidrug Resistance protein
SH05_RS06535	PF00239	Resolvase, N terminal domain
SH05_RS06535	PF07508	Recombinase
SH05_RS06535	PF13408	Recombinase zinc beta ribbon domain
SH05_RS06540	PF01161	Phosphatidylethanolamine-binding protein
SH05_RS06545	PF12833	Helix-turn-helix domain
SH05_RS06560	PF07102	Protein of unknown function (DUF1364)
SH05_RS06565	PF05866	Endodeoxyribonuclease RusA
SH05_RS06575	PF06530	SH05_RS06575
SH05_RS06585	PF01609	Transposase DDE domain
SH05_RS06585	PF05598	SH05_RS06585
SH05_RS06590	PF07166	Protein of unknown function (DUF1398)
SH05_RS06600	PF13132	SH05_RS06600
SH05_RS06615	PF03400	SH05_RS06615
SH05_RS06620	PF07471	Phage DNA packaging protein Nu1
SH05_RS06625	PF02413	SH05_RS06625
SH05_RS06625	PF05876	SH05_RS06625
SH05_RS06640	PF12833	Helix-turn-helix domain
SH05_RS06645	PF01278	Omptin family
SH05_RS06655	PF12833	Helix-turn-helix domain
SH05_RS06660	PF14488	Domain of unknown function (DUF4434)
SH05_RS06665	PF13283	SH05_RS06665
SH05_RS06665	PF13429	Tetratricopeptide repeat
SH05_RS06670	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
SH05_RS06670	PF13632	Glycosyl transferase family group 2
SH05_RS06675	PF00512	His Kinase A (phospho-acceptor) domain
SH05_RS06675	PF00672	HAMP domain
SH05_RS06675	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH05_RS06680	PF00072	Response regulator receiver domain
SH05_RS06680	PF00486	Transcriptional regulatory protein, C terminal
SH05_RS06685	PF02321	Outer membrane efflux protein
SH05_RS06690	PF11604	Copper binding periplasmic protein CusF
SH05_RS06695	PF00529	HlyD family secretion protein
SH05_RS06695	PF16576	SH05_RS06695
SH05_RS06700	PF00873	AcrB/AcrD/AcrF family
SH05_RS06705	PF00324	Amino acid permease
SH05_RS06710	PF00924	Mechanosensitive ion channel
SH05_RS06715	PF00881	Nitroreductase family
SH05_RS06720	PF04237	YjbR
SH05_RS06725	PF06643	SH05_RS06725
SH05_RS06730	PF04107	Glutamate-cysteine ligase family 2(GCS2)
SH05_RS06740	PF01848	SH05_RS06740
SH05_RS06745	PF01609	Transposase DDE domain
SH05_RS06750	PF01648	4'-phosphopantetheinyl transferase superfamily
SH05_RS06755	PF00593	TonB dependent receptor
SH05_RS06755	PF07715	TonB-dependent Receptor Plug Domain
SH05_RS06760	PF00756	Putative esterase
SH05_RS06760	PF11806	Domain of unknown function (DUF3327)
SH05_RS06765	PF03621	MbtH-like protein
SH05_RS06770	PF00501	AMP-binding enzyme
SH05_RS06770	PF00550	Phosphopantetheine attachment site
SH05_RS06770	PF00668	Condensation domain
SH05_RS06770	PF00975	Thioesterase domain
SH05_RS06775	PF02706	Chain length determinant protein
SH05_RS06780	PF00005	ABC transporter
SH05_RS06785	PF01032	FecCD transport family
SH05_RS06790	PF01032	FecCD transport family
SH05_RS06795	PF05977	Transmembrane secretion effector
SH05_RS06800	PF01497	Periplasmic binding protein
SH05_RS06805	PF00425	chorismate binding enzyme
SH05_RS06810	PF00501	AMP-binding enzyme
SH05_RS06810	PF13193	AMP-binding enzyme C-terminal domain
SH05_RS06815	PF00550	Phosphopantetheine attachment site
SH05_RS06815	PF00857	Isochorismatase family
SH05_RS06820	PF13561	Enoyl-(Acyl carrier protein) reductase
SH05_RS06825	PF03061	Thioesterase superfamily
SH05_RS06830	PF02554	SH05_RS06830
SH05_RS06830	PF13722	SH05_RS06830
SH05_RS06835	PF04328	SH05_RS06835
SH05_RS06840	PF00465	Iron-containing alcohol dehydrogenase
SH05_RS06845	PF00155	Aminotransferase class I and II
SH05_RS06850	PF02195	ParB-like nuclease domain
SH05_RS06855	PF01507	Phosphoadenosine phosphosulfate reductase family
SH05_RS06855	PF11922	SH05_RS06855
SH05_RS06860	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS06860	PF03466	LysR substrate binding domain
SH05_RS06865	PF13098	Thioredoxin-like domain
SH05_RS06870	PF00578	AhpC/TSA family
SH05_RS06870	PF10417	C-terminal domain of 1-Cys peroxiredoxin
SH05_RS06875	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SH05_RS06875	PF13192	Thioredoxin domain
SH05_RS06880	PF00582	Universal stress protein family
SH05_RS06885	PF00107	Zinc-binding dehydrogenase
SH05_RS06885	PF08240	Alcohol dehydrogenase GroES-like domain
SH05_RS06885	PF13823	Alcohol dehydrogenase GroES-associated
SH05_RS06895	PF01272	Transcription elongation factor, GreA/GreB, C-term
SH05_RS06895	PF14760	Rnk N-terminus
SH05_RS06900	PF00445	Ribonuclease T2 family
SH05_RS06905	PF00939	Sodium:sulfate symporter transmembrane region
SH05_RS06910	PF01874	ATP:dephospho-CoA triphosphoribosyl transferase
SH05_RS06915	PF03802	SH05_RS06915
SH05_RS06920	PF04223	Citrate lyase, alpha subunit (CitF)
SH05_RS06925	PF03328	HpcH/HpaI aldolase/citrate lyase family
SH05_RS06930	PF06857	SH05_RS06930
SH05_RS06935	PF08218	Citrate lyase ligase C-terminal domain
SH05_RS06940	PF00989	PAS fold
SH05_RS06940	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH05_RS06940	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
SH05_RS06940	PF17203	SH05_RS06940
SH05_RS06945	PF00072	Response regulator receiver domain
SH05_RS06945	PF12431	SH05_RS06945
SH05_RS06950	PF03606	SH05_RS06950
SH05_RS06955	PF07017	Antimicrobial peptide resistance and lipid A acylation protein PagP
SH05_RS06960	PF00313	'Cold-shock' DNA-binding domain
SH05_RS06965	PF02537	SH05_RS06965
SH05_RS06975	PF02416	mttA/Hcf106 family
SH05_RS06980	PF04055	Radical SAM superfamily
SH05_RS06980	PF16881	SH05_RS06980
SH05_RS06985	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS06985	PF03466	LysR substrate binding domain
SH05_RS06995	PF03099	Biotin/lipoate A/B protein ligase family
SH05_RS07000	PF04359	Protein of unknown function (DUF493)
SH05_RS07005	PF00768	D-alanyl-D-alanine carboxypeptidase
SH05_RS07005	PF07943	Penicillin-binding protein 5, C-terminal domain
SH05_RS07010	PF03330	Rare lipoprotein A (RlpA)-like double-psi beta-barrel
SH05_RS07010	PF05036	Sporulation related domain
SH05_RS07015	PF01098	SH05_RS07015
SH05_RS07020	PF00905	Penicillin binding protein transpeptidase domain
SH05_RS07020	PF03717	Penicillin-binding Protein dimerisation domain
SH05_RS07025	PF02590	Predicted SPOUT methyltransferase
SH05_RS07030	PF02410	Oligomerisation domain
SH05_RS07035	PF00300	Histidine phosphatase superfamily (branch 1)
SH05_RS07040	PF01467	Cytidylyltransferase
SH05_RS07045	PF06144	DNA polymerase III, delta subunit
SH05_RS07045	PF14840	Processivity clamp loader gamma complex DNA pol III C-term
SH05_RS07050	PF04390	Lipopolysaccharide-assembly
SH05_RS07055	PF00133	tRNA synthetases class I (I, L, M and V)
SH05_RS07055	PF08264	Anticodon-binding domain of tRNA
SH05_RS07055	PF13603	Leucyl-tRNA synthetase, Domain 2
SH05_RS07060	PF07295	SH05_RS07060
SH05_RS07065	PF08238	Sel1 repeat
SH05_RS07070	PF06889	SH05_RS07070
SH05_RS07080	PF08238	Sel1 repeat
SH05_RS07085	PF06889	SH05_RS07085
SH05_RS07095	PF00012	Hsp70 protein
SH05_RS07100	PF01156	Inosine-uridine preferring nucleoside hydrolase
SH05_RS07105	PF00005	ABC transporter
SH05_RS07110	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS07115	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS07120	PF00497	Bacterial extracellular solute-binding proteins, family 3
SH05_RS07125	PF01609	Transposase DDE domain
SH05_RS07125	PF05598	SH05_RS07125
SH05_RS07130	PF00795	Carbon-nitrogen hydrolase
SH05_RS07135	PF00571	CBS domain
SH05_RS07135	PF03471	Transporter associated domain
SH05_RS07140	PF02130	Uncharacterized protein family UPF0054
SH05_RS07145	PF02562	PhoH-like protein
SH05_RS07150	PF00919	Uncharacterized protein family UPF0004
SH05_RS07150	PF01938	TRAM domain
SH05_RS07150	PF04055	Radical SAM superfamily
SH05_RS07155	PF01494	FAD binding domain
SH05_RS07195	PF00733	Asparagine synthase
SH05_RS07195	PF13537	Glutamine amidotransferase domain
SH05_RS07200	PF13242	HAD-hyrolase-like
SH05_RS07200	PF13344	Haloacid dehalogenase-like hydrolase
SH05_RS07205	PF00480	ROK family
SH05_RS07205	PF01047	MarR family
SH05_RS07210	PF01979	Amidohydrolase family
SH05_RS07215	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
SH05_RS07220	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
SH05_RS07220	PF00367	phosphotransferase system, EIIB
SH05_RS07220	PF02378	Phosphotransferase system, EIIC
SH05_RS07225	PF00749	tRNA synthetases class I (E and Q), catalytic domain
SH05_RS07225	PF03950	tRNA synthetases class I (E and Q), anti-codon binding domain
SH05_RS07230	PF03573	outer membrane porin, OprD family
SH05_RS07235	PF13982	SH05_RS07235
SH05_RS07240	PF01475	Ferric uptake regulator family
SH05_RS07255	PF00258	Flavodoxin
SH05_RS07260	PF01402	Ribbon-helix-helix protein, copG family
SH05_RS07265	PF12697	Alpha/beta hydrolase family
SH05_RS07270	PF03925	SeqA protein
SH05_RS07275	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
SH05_RS07275	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
SH05_RS07275	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
SH05_RS07275	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
SH05_RS07295	PF13520	Amino acid permease
SH05_RS07300	PF01276	Orn/Lys/Arg decarboxylase, major domain
SH05_RS07300	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
SH05_RS07300	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
SH05_RS07310	PF00072	Response regulator receiver domain
SH05_RS07310	PF00486	Transcriptional regulatory protein, C terminal
SH05_RS07315	PF00512	His Kinase A (phospho-acceptor) domain
SH05_RS07315	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH05_RS07315	PF02702	Osmosensitive K+ channel His kinase sensor domain
SH05_RS07315	PF13492	GAF domain
SH05_RS07315	PF13493	Domain of unknown function (DUF4118)
SH05_RS07320	PF02669	SH05_RS07320
SH05_RS07325	PF00122	E1-E2 ATPase
SH05_RS07325	PF00702	haloacid dehalogenase-like hydrolase
SH05_RS07330	PF03814	SH05_RS07330
SH05_RS07335	PF09604	SH05_RS07335
SH05_RS07340	PF10725	SH05_RS07340
SH05_RS07345	PF03527	SH05_RS07345
SH05_RS07345	PF05593	SH05_RS07345
SH05_RS07355	PF03527	SH05_RS07355
SH05_RS07355	PF05593	SH05_RS07355
SH05_RS07365	PF13808	SH05_RS07365
SH05_RS07370	PF01609	Transposase DDE domain
SH05_RS07370	PF13808	SH05_RS07370
SH05_RS07375	PF01609	Transposase DDE domain
SH05_RS07375	PF13808	SH05_RS07375
SH05_RS07380	PF08349	SH05_RS07380
SH05_RS07385	PF00875	DNA photolyase
SH05_RS07385	PF03441	FAD binding domain of DNA photolyase
SH05_RS07390	PF00854	POT family
SH05_RS07395	PF01784	NIF3 (NGG1p interacting factor 3)
SH05_RS07400	PF02682	Allophanate hydrolase subunit 1
SH05_RS07405	PF02626	Allophanate hydrolase subunit 2
SH05_RS07410	PF03746	LamB/YcsF family
SH05_RS07415	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
SH05_RS07415	PF06827	Zinc finger found in FPG and IleRS
SH05_RS07415	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
SH05_RS07420	PF05145	SH05_RS07420
SH05_RS07425	PF00419	Fimbrial protein
SH05_RS07430	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
SH05_RS07430	PF02753	Pili assembly chaperone PapD, C-terminal domain
SH05_RS07435	PF00577	Outer membrane usher protein
SH05_RS07435	PF13953	PapC C-terminal domain
SH05_RS07435	PF13954	PapC N-terminal domain
SH05_RS07440	PF00419	Fimbrial protein
SH05_RS07445	PF00285	Citrate synthase
SH05_RS07455	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
SH05_RS07460	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
SH05_RS07465	PF00890	FAD binding domain
SH05_RS07465	PF02910	Fumarate reductase flavoprotein C-term
SH05_RS07470	PF13085	2Fe-2S iron-sulfur cluster binding domain
SH05_RS07470	PF13534	4Fe-4S dicluster domain
SH05_RS07480	PF00676	Dehydrogenase E1 component
SH05_RS07480	PF02779	Transketolase, pyrimidine binding domain
SH05_RS07480	PF16078	SH05_RS07480
SH05_RS07480	PF16870	SH05_RS07480
SH05_RS07485	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
SH05_RS07485	PF00364	Biotin-requiring enzyme
SH05_RS07485	PF02817	e3 binding domain
SH05_RS07490	PF00549	CoA-ligase
SH05_RS07490	PF08442	ATP-grasp domain
SH05_RS07495	PF00549	CoA-ligase
SH05_RS07495	PF02629	CoA binding domain
SH05_RS07500	PF00392	Bacterial regulatory proteins, gntR family
SH05_RS07500	PF07702	UTRA domain
SH05_RS07505	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
SH05_RS07505	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
SH05_RS07505	PF02378	Phosphotransferase system, EIIC
SH05_RS07510	PF01074	Glycosyl hydrolases family 38 N-terminal domain
SH05_RS07510	PF07748	Glycosyl hydrolases family 38 C-terminal domain
SH05_RS07510	PF09261	Alpha mannosidase, middle domain
SH05_RS07520	PF01654	SH05_RS07520
SH05_RS07525	PF02322	SH05_RS07525
SH05_RS07530	PF08173	SH05_RS07530
SH05_RS07535	PF09600	SH05_RS07535
SH05_RS07540	PF03061	Thioesterase superfamily
SH05_RS07545	PF01618	SH05_RS07545
SH05_RS07550	PF02472	Biopolymer transport protein ExbD/TolR
SH05_RS07555	PF06519	TolA C-terminal
SH05_RS07560	PF04052	TolB amino-terminal domain
SH05_RS07560	PF07676	WD40-like Beta Propeller Repeat
SH05_RS07565	PF00691	OmpA family
SH05_RS07570	PF13174	Tetratricopeptide repeat
SH05_RS07570	PF13432	Tetratricopeptide repeat
SH05_RS07570	PF16331	SH05_RS07570
SH05_RS07610	PF02445	Quinolinate synthetase A protein
SH05_RS07615	PF04973	SH05_RS07615
SH05_RS07620	PF01545	Cation efflux family
SH05_RS07625	PF13985	SH05_RS07625
SH05_RS07635	PF00793	DAHP synthetase I family
SH05_RS07640	PF00300	Histidine phosphatase superfamily (branch 1)
SH05_RS07645	PF01263	Aldose 1-epimerase
SH05_RS07650	PF00288	GHMP kinases N terminal domain
SH05_RS07650	PF08544	GHMP kinases C terminal
SH05_RS07650	PF10509	Galactokinase galactose-binding signature
SH05_RS07655	PF01087	Galactose-1-phosphate uridyl transferase, N-terminal domain
SH05_RS07655	PF02744	Galactose-1-phosphate uridyl transferase, C-terminal domain
SH05_RS07660	PF16363	SH05_RS07660
SH05_RS07665	PF00005	ABC transporter
SH05_RS07670	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS07670	PF03459	TOBE domain
SH05_RS07675	PF10766	Protein of unknown function (DUF2592)
SH05_RS07680	PF13531	Bacterial extracellular solute-binding protein
SH05_RS07685	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS07690	PF00005	ABC transporter
SH05_RS07690	PF03459	TOBE domain
SH05_RS07695	PF08282	haloacid dehalogenase-like hydrolase
SH05_RS07700	PF10282	Lactonase, 7-bladed beta-propeller
SH05_RS07705	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS07705	PF03466	LysR substrate binding domain
SH05_RS07710	PF04303	PrpF protein
SH05_RS07715	PF00939	Sodium:sulfate symporter transmembrane region
SH05_RS07720	PF00330	Aconitase family (aconitate hydratase)
SH05_RS07720	PF00694	Aconitase C-terminal domain
SH05_RS07725	PF01095	Pectinesterase
SH05_RS07730	PF01161	Phosphatidylethanolamine-binding protein
SH05_RS07735	PF00202	Aminotransferase class-III
SH05_RS07740	PF04055	Radical SAM superfamily
SH05_RS07740	PF06968	Biotin and Thiamin Synthesis associated domain
SH05_RS07745	PF00155	Aminotransferase class I and II
SH05_RS07750	PF08241	Methyltransferase domain
SH05_RS07755	PF13500	AAA domain
SH05_RS07760	PF00271	Helicase conserved C-terminal domain
SH05_RS07760	PF02151	UvrB/uvrC motif
SH05_RS07760	PF04851	Type III restriction enzyme, res subunit
SH05_RS07760	PF12344	Ultra-violet resistance protein B
SH05_RS07765	PF01933	Uncharacterised protein family UPF0052
SH05_RS07775	PF04055	Radical SAM superfamily
SH05_RS07775	PF06463	Molybdenum Cofactor Synthesis C
SH05_RS07775	PF13353	4Fe-4S single cluster domain
SH05_RS07780	PF00994	Probable molybdopterin binding domain
SH05_RS07785	PF01967	MoaC family
SH05_RS07790	PF02597	ThiS family
SH05_RS07795	PF02391	MoaE protein
SH05_RS07800	PF01027	Inhibitor of apoptosis-promoting Bax1
SH05_RS07805	PF01027	Inhibitor of apoptosis-promoting Bax1
SH05_RS07810	PF03706	SH05_RS07810
SH05_RS07815	PF13091	PLD-like domain
SH05_RS07820	PF03372	Endonuclease/Exonuclease/phosphatase family
SH05_RS07825	PF11076	SH05_RS07825
SH05_RS07830	PF12698	ABC-2 family transporter protein
SH05_RS07835	PF12698	ABC-2 family transporter protein
SH05_RS07840	PF00005	ABC transporter
SH05_RS07845	PF16576	SH05_RS07845
SH05_RS07850	PF00440	Bacterial regulatory proteins, tetR family
SH05_RS07850	PF09209	Domain of unknown function (DUF1956)
SH05_RS07855	PF00270	DEAD/DEAH box helicase
SH05_RS07855	PF00271	Helicase conserved C-terminal domain
SH05_RS07860	PF08719	Domain of unknown function (DUF1768)
SH05_RS07865	PF00270	DEAD/DEAH box helicase
SH05_RS07865	PF06733	DEAD_2
SH05_RS07865	PF13307	Helicase C-terminal domain
SH05_RS07870	PF02885	Glycosyl transferase family, helical bundle domain
SH05_RS07875	PF02615	Malate/L-lactate dehydrogenase
SH05_RS07880	PF07338	Protein of unknown function (DUF1471)
SH05_RS07885	PF01258	Prokaryotic dksA/traR C4-type zinc finger
SH05_RS07890	PF13640	2OG-Fe(II) oxygenase superfamily
SH05_RS07895	PF00593	TonB dependent receptor
SH05_RS07895	PF07715	TonB-dependent Receptor Plug Domain
SH05_RS07900	PF07338	Protein of unknown function (DUF1471)
SH05_RS07905	PF05971	Protein of unknown function (DUF890)
SH05_RS07910	PF00924	Mechanosensitive ion channel
SH05_RS07915	PF00005	ABC transporter
SH05_RS07920	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS07925	PF00497	Bacterial extracellular solute-binding proteins, family 3
SH05_RS07935	PF00210	Ferritin-like domain
SH05_RS07940	PF00892	EamA-like transporter family
SH05_RS07945	PF13505	Outer membrane protein beta-barrel domain
SH05_RS07950	PF00884	Sulfatase
SH05_RS07960	PF01325	Iron dependent repressor, N-terminal DNA binding domain
SH05_RS07960	PF02742	Iron dependent repressor, metal binding and dimerisation domain
SH05_RS07965	PF03600	Citrate transporter
SH05_RS07970	PF03734	L,D-transpeptidase catalytic domain
SH05_RS07975	PF00005	ABC transporter
SH05_RS07975	PF12848	ABC transporter
SH05_RS07980	PF07350	Protein of unknown function (DUF1479)
SH05_RS07985	PF08282	haloacid dehalogenase-like hydrolase
SH05_RS07990	PF01228	Glycine radical
SH05_RS07990	PF02901	Pyruvate formate lyase
SH05_RS07995	PF04055	Radical SAM superfamily
SH05_RS07995	PF13353	4Fe-4S single cluster domain
SH05_RS08000	PF00923	Transaldolase
SH05_RS08005	PF00899	ThiF family
SH05_RS08010	PF00994	Probable molybdopterin binding domain
SH05_RS08010	PF03453	MoeA N-terminal region (domain I and II)
SH05_RS08010	PF03454	MoeA C-terminal region (domain IV)
SH05_RS08015	PF01112	Asparaginase
SH05_RS08020	PF00005	ABC transporter
SH05_RS08020	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
SH05_RS08025	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
SH05_RS08030	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS08035	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS08035	PF12911	SH05_RS08035
SH05_RS08045	PF00990	GGDEF domain
SH05_RS08045	PF17156	SH05_RS08045
SH05_RS08050	PF00919	Uncharacterized protein family UPF0004
SH05_RS08050	PF04055	Radical SAM superfamily
SH05_RS08055	PF10799	SH05_RS08055
SH05_RS08060	PF07995	Glucose / Sorbosone dehydrogenase
SH05_RS08065	PF00043	Glutathione S-transferase, C-terminal domain
SH05_RS08065	PF02798	Glutathione S-transferase, N-terminal domain
SH05_RS08070	PF00768	D-alanyl-D-alanine carboxypeptidase
SH05_RS08070	PF07943	Penicillin-binding protein 5, C-terminal domain
SH05_RS08075	PF00455	SH05_RS08075
SH05_RS08075	PF08220	DeoR-like helix-turn-helix domain
SH05_RS08080	PF01569	PAP2 superfamily
SH05_RS08085	PF07690	Major Facilitator Superfamily
SH05_RS08095	PF08282	haloacid dehalogenase-like hydrolase
SH05_RS08100	PF07690	Major Facilitator Superfamily
SH05_RS08105	PF00440	Bacterial regulatory proteins, tetR family
SH05_RS08110	PF02080	TrkA-C domain
SH05_RS08110	PF06826	SH05_RS08110
SH05_RS08115	PF11045	SH05_RS08115
SH05_RS08120	PF00462	Glutaredoxin
SH05_RS08125	PF07214	SH05_RS08125
SH05_RS08130	PF00881	Nitroreductase family
SH05_RS08135	PF08443	RimK-like ATP-grasp domain
SH05_RS08140	PF10722	Putative bacterial sensory transduction regulator
SH05_RS08150	PF13416	Bacterial extracellular solute-binding protein
SH05_RS08155	PF00005	ABC transporter
SH05_RS08155	PF08402	TOBE domain
SH05_RS08160	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS08165	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS08170	PF10767	SH05_RS08170
SH05_RS08175	PF05958	tRNA (Uracil-5-)-methyltransferase
SH05_RS08180	PF00497	Bacterial extracellular solute-binding proteins, family 3
SH05_RS08185	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS08190	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS08195	PF00497	Bacterial extracellular solute-binding proteins, family 3
SH05_RS08200	PF00005	ABC transporter
SH05_RS08205	PF12883	Protein of unknown function (DUF3828)
SH05_RS08210	PF01906	Putative heavy-metal-binding
SH05_RS08215	PF01510	N-acetylmuramoyl-L-alanine amidase
SH05_RS08220	PF01370	NAD dependent epimerase/dehydratase family
SH05_RS08225	PF11066	SH05_RS08225
SH05_RS08225	PF13460	NADH(P)-binding
SH05_RS08230	PF01212	Beta-eliminating lyase
SH05_RS08235	PF00205	Thiamine pyrophosphate enzyme, central domain
SH05_RS08235	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
SH05_RS08235	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
SH05_RS08240	PF00111	2Fe-2S iron-sulfur cluster binding domain
SH05_RS08240	PF00175	Oxidoreductase NAD-binding domain
SH05_RS08240	PF00970	Oxidoreductase FAD-binding domain
SH05_RS08245	PF03063	Prismane/CO dehydrogenase family
SH05_RS08250	PF03956	SH05_RS08250
SH05_RS08255	PF00230	Major intrinsic protein
SH05_RS08265	PF11398	Protein of unknown function (DUF2813)
SH05_RS08270	PF04393	SH05_RS08270
SH05_RS08275	PF16576	SH05_RS08275
SH05_RS08280	PF00005	ABC transporter
SH05_RS08280	PF02687	SH05_RS08280
SH05_RS08280	PF12704	MacB-like periplasmic core domain
SH05_RS08285	PF00313	'Cold-shock' DNA-binding domain
SH05_RS08290	PF02617	ATP-dependent Clp protease adaptor protein ClpS
SH05_RS08295	PF00004	ATPase family associated with various cellular activities (AAA)
SH05_RS08295	PF02861	Clp amino terminal domain
SH05_RS08295	PF07724	AAA domain (Cdc48 subfamily)
SH05_RS08295	PF10431	C-terminal, D2-small domain, of ClpB protein
SH05_RS08305	PF01176	Translation initiation factor 1A / IF-1
SH05_RS08310	PF03588	Leucyl/phenylalanyl-tRNA protein transferase
SH05_RS08315	PF00005	ABC transporter
SH05_RS08315	PF00664	ABC transporter transmembrane region
SH05_RS08320	PF00005	ABC transporter
SH05_RS08320	PF00664	ABC transporter transmembrane region
SH05_RS08325	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SH05_RS08330	PF01037	AsnC family
SH05_RS08330	PF13412	Winged helix-turn-helix DNA-binding
SH05_RS08335	PF01580	FtsK/SpoIIIE family
SH05_RS08335	PF09397	Ftsk gamma domain
SH05_RS08335	PF13491	SH05_RS08335
SH05_RS08340	PF03548	Outer membrane lipoprotein carrier protein LolA
SH05_RS08345	PF00004	ATPase family associated with various cellular activities (AAA)
SH05_RS08345	PF12002	MgsA AAA+ ATPase C terminal
SH05_RS08345	PF16193	SH05_RS08345
SH05_RS08350	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
SH05_RS08350	PF02403	Seryl-tRNA synthetase N-terminal domain
SH05_RS08355	PF00384	Molybdopterin oxidoreductase
SH05_RS08355	PF01568	Molydopterin dinucleotide binding domain
SH05_RS08355	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
SH05_RS08360	PF12800	4Fe-4S binding domain
SH05_RS08360	PF13247	4Fe-4S dicluster domain
SH05_RS08365	PF04976	SH05_RS08365
SH05_RS08370	PF00857	Isochorismatase family
SH05_RS08375	PF07690	Major Facilitator Superfamily
SH05_RS08380	PF13520	Amino acid permease
SH05_RS08385	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS08385	PF03466	LysR substrate binding domain
SH05_RS08390	PF02525	Flavodoxin-like fold
SH05_RS08395	PF04055	Radical SAM superfamily
SH05_RS08395	PF13353	4Fe-4S single cluster domain
SH05_RS08400	PF01228	Glycine radical
SH05_RS08400	PF02901	Pyruvate formate lyase
SH05_RS08405	PF01226	Formate/nitrite transporter
SH05_RS08410	PF02624	YcaO-like family
SH05_RS08415	PF04239	Protein of unknown function (DUF421)
SH05_RS08420	PF00266	Aminotransferase class-V
SH05_RS08425	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
SH05_RS08430	PF01435	Peptidase family M48
SH05_RS08435	PF02224	Cytidylate kinase
SH05_RS08440	PF00575	S1 RNA binding domain
SH05_RS08445	PF00216	Bacterial DNA-binding protein
SH05_RS08450	PF00753	Metallo-beta-lactamase superfamily
SH05_RS08450	PF03772	SH05_RS08450
SH05_RS08455	PF00005	ABC transporter
SH05_RS08455	PF00664	ABC transporter transmembrane region
SH05_RS08460	PF02606	Tetraacyldisaccharide-1-P 4'-kinase
SH05_RS08465	PF06224	SH05_RS08465
SH05_RS08470	PF03966	Trm112p-like protein
SH05_RS08475	PF02348	Cytidylyltransferase
SH05_RS08480	PF01636	Phosphotransferase enzyme family
SH05_RS08485	PF02698	DUF218 domain
SH05_RS08490	PF13847	Methyltransferase domain
SH05_RS08495	PF03882	KicB killing factor
SH05_RS08495	PF17192	SH05_RS08495
SH05_RS08495	PF17193	SH05_RS08495
SH05_RS08500	PF04288	MukE-like family
SH05_RS08505	PF04310	MukB N-terminal
SH05_RS08505	PF13558	Putative exonuclease SbcCD, C subunit
SH05_RS08505	PF16330	SH05_RS08505
SH05_RS08510	PF01471	Putative peptidoglycan binding domain
SH05_RS08510	PF03734	L,D-transpeptidase catalytic domain
SH05_RS08515	PF05951	SH05_RS08515
SH05_RS08520	PF00753	Metallo-beta-lactamase superfamily
SH05_RS08525	PF00155	Aminotransferase class I and II
SH05_RS08535	PF00267	Gram-negative porin
SH05_RS08540	PF00152	tRNA synthetases class II (D, K and N)
SH05_RS08540	PF01336	OB-fold nucleic acid binding domain
SH05_RS08545	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
SH05_RS08550	PF01433	Peptidase family M1
SH05_RS08550	PF11940	Domain of unknown function (DUF3458)
SH05_RS08555	PF00005	ABC transporter
SH05_RS08560	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS08565	PF00296	Luciferase-like monooxygenase
SH05_RS08570	PF09084	NMT1/THI5 like
SH05_RS08575	PF03358	NADPH-dependent FMN reductase
SH05_RS08580	PF00419	Fimbrial protein
SH05_RS08585	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
SH05_RS08585	PF02753	Pili assembly chaperone PapD, C-terminal domain
SH05_RS08590	PF00577	Outer membrane usher protein
SH05_RS08590	PF13953	PapC C-terminal domain
SH05_RS08590	PF13954	PapC N-terminal domain
SH05_RS08595	PF00419	Fimbrial protein
SH05_RS08600	PF00419	Fimbrial protein
SH05_RS08605	PF00419	Fimbrial protein
SH05_RS08610	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
SH05_RS08610	PF02753	Pili assembly chaperone PapD, C-terminal domain
SH05_RS08615	PF01180	Dihydroorotate dehydrogenase
SH05_RS08620	PF07126	SH05_RS08620
SH05_RS08625	PF00111	2Fe-2S iron-sulfur cluster binding domain
SH05_RS08625	PF03473	MOSC domain
SH05_RS08625	PF03476	MOSC N-terminal beta barrel domain
SH05_RS08630	PF01170	Putative RNA methylase family UPF0020
SH05_RS08630	PF02926	THUMP domain
SH05_RS08630	PF10672	S-adenosylmethionine-dependent methyltransferase
SH05_RS08635	PF00005	ABC transporter
SH05_RS08635	PF12848	ABC transporter
SH05_RS08635	PF16326	SH05_RS08635
SH05_RS08640	PF04403	SH05_RS08640
SH05_RS08645	PF02470	SH05_RS08645
SH05_RS08650	PF03886	Protein of unknown function (DUF330)
SH05_RS08655	PF04957	Ribosome modulation factor
SH05_RS08660	PF07977	FabA-like domain
SH05_RS08665	PF05362	Lon protease (S16) C-terminal proteolytic domain
SH05_RS08665	PF13654	AAA domain
SH05_RS08670	PF06303	Organiser of macrodomain of Terminus of chromosome
SH05_RS08675	PF00691	OmpA family
SH05_RS08675	PF01389	OmpA-like transmembrane domain
SH05_RS08685	PF03846	Cell division inhibitor SulA
SH05_RS08690	PF04993	TfoX N-terminal domain
SH05_RS08690	PF04994	TfoX C-terminal domain
SH05_RS08695	PF12805	SH05_RS08695
SH05_RS08695	PF13515	SH05_RS08695
SH05_RS08700	PF03733	SH05_RS08700
SH05_RS08705	PF00580	UvrD/REP helicase N-terminal domain
SH05_RS08705	PF12462	SH05_RS08705
SH05_RS08705	PF13361	UvrD-like helicase C-terminal domain
SH05_RS08710	PF02142	MGS-like domain
SH05_RS08715	PF09829	SH05_RS08715
SH05_RS08725	PF13380	CoA binding domain
SH05_RS08730	PF08755	Hemimethylated DNA-binding protein YccV like
SH05_RS08735	PF10672	S-adenosylmethionine-dependent methyltransferase
SH05_RS08740	PF00708	Acylphosphatase
SH05_RS08745	PF04358	DsrC like protein
SH05_RS08750	PF01027	Inhibitor of apoptosis-promoting Bax1
SH05_RS08760	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
SH05_RS08760	PF14720	NiFe/NiFeSe hydrogenase small subunit C-terminal
SH05_RS08765	PF00374	Nickel-dependent hydrogenase
SH05_RS08770	PF01292	Prokaryotic cytochrome b561
SH05_RS08775	PF01750	Hydrogenase maturation protease
SH05_RS08780	PF07449	Hydrogenase-1 expression protein HyaE
SH05_RS08785	PF04809	HupH hydrogenase expression protein, C-terminal conserved region
SH05_RS08790	PF01654	SH05_RS08790
SH05_RS08795	PF02322	SH05_RS08795
SH05_RS08800	PF08173	SH05_RS08800
SH05_RS08805	PF00328	Histidine phosphatase superfamily (branch 2)
SH05_RS08810	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
SH05_RS08810	PF02706	Chain length determinant protein
SH05_RS08810	PF13807	SH05_RS08810
SH05_RS08815	PF01451	Low molecular weight phosphotyrosine protein phosphatase
SH05_RS08820	PF02563	Polysaccharide biosynthesis/export protein
SH05_RS08820	PF10531	SLBB domain
SH05_RS08825	PF06082	SH05_RS08825
SH05_RS08830	PF06251	Capsule biosynthesis GfcC
SH05_RS08835	PF11102	Group 4 capsule polysaccharide formation lipoprotein gfcB
SH05_RS08850	PF03400	SH05_RS08850
SH05_RS08855	PF00313	'Cold-shock' DNA-binding domain
SH05_RS08860	PF00313	'Cold-shock' DNA-binding domain
SH05_RS08865	PF15939	SH05_RS08865
SH05_RS08870	PF08178	SH05_RS08870
SH05_RS08875	PF12801	SH05_RS08875
SH05_RS08880	PF00072	Response regulator receiver domain
SH05_RS08880	PF00512	His Kinase A (phospho-acceptor) domain
SH05_RS08880	PF00672	HAMP domain
SH05_RS08880	PF01627	Hpt domain
SH05_RS08880	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH05_RS08885	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
SH05_RS08890	PF00072	Response regulator receiver domain
SH05_RS08890	PF00486	Transcriptional regulatory protein, C terminal
SH05_RS08895	PF03264	NapC/NirT cytochrome c family, N-terminal region
SH05_RS08900	PF00384	Molybdopterin oxidoreductase
SH05_RS08900	PF01568	Molydopterin dinucleotide binding domain
SH05_RS08905	PF02613	Nitrate reductase delta subunit
SH05_RS08910	PF13591	MerR HTH family regulatory protein
SH05_RS08915	PF00226	DnaJ domain
SH05_RS08915	PF01556	DnaJ C terminal domain
SH05_RS08925	PF00328	Histidine phosphatase superfamily (branch 2)
SH05_RS08930	PF13993	SH05_RS08930
SH05_RS08935	PF03358	NADPH-dependent FMN reductase
SH05_RS08945	PF10685	SH05_RS08945
SH05_RS08950	PF00860	Permease family
SH05_RS08955	PF01613	Flavin reductase like domain
SH05_RS08960	PF00881	Nitroreductase family
SH05_RS08965	PF00561	alpha/beta hydrolase fold
SH05_RS08970	PF01042	Endoribonuclease L-PSP
SH05_RS08975	PF00857	Isochorismatase family
SH05_RS08980	PF00296	Luciferase-like monooxygenase
SH05_RS08985	PF00440	Bacterial regulatory proteins, tetR family
SH05_RS08985	PF08362	YcdC-like protein, C-terminal region
SH05_RS08990	PF00171	Aldehyde dehydrogenase family
SH05_RS08990	PF01619	Proline dehydrogenase
SH05_RS08990	PF14850	DNA-binding domain of Proline dehydrogenase
SH05_RS09000	PF00474	Sodium:solute symporter family
SH05_RS09015	PF09375	Imelysin
SH05_RS09015	PF13473	Cupredoxin-like domain
SH05_RS09020	PF04261	Dyp-type peroxidase family
SH05_RS09030	PF02562	PhoH-like protein
SH05_RS09035	PF13994	SH05_RS09035
SH05_RS09040	PF00535	Glycosyl transferase family 2
SH05_RS09045	PF01522	Polysaccharide deacetylase
SH05_RS09045	PF14883	Hypothetical glycosyl hydrolase family 13
SH05_RS09055	PF00990	GGDEF domain
SH05_RS09055	PF17158	SH05_RS09055
SH05_RS09060	PF00665	Integrase core domain
SH05_RS09060	PF13276	SH05_RS09060
SH05_RS09065	PF01527	Transposase
SH05_RS09090	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
SH05_RS09095	PF02811	PHP domain
SH05_RS09100	PF02613	Nitrate reductase delta subunit
SH05_RS09105	PF06496	SH05_RS09105
SH05_RS09110	PF03783	Curli production assembly/transport component CsgG
SH05_RS09115	PF10614	SH05_RS09115
SH05_RS09120	PF10627	SH05_RS09120
SH05_RS09125	PF00196	Bacterial regulatory proteins, luxR family
SH05_RS09135	PF07012	SH05_RS09135
SH05_RS09140	PF07012	SH05_RS09140
SH05_RS09145	PF10610	Thin aggregative fimbriae synthesis protein
SH05_RS09155	PF01661	Macro domain
SH05_RS09160	PF13091	PLD-like domain
SH05_RS09165	PF01757	SH05_RS09165
SH05_RS09180	PF04349	Periplasmic glucan biosynthesis protein, MdoG
SH05_RS09185	PF00535	Glycosyl transferase family 2
SH05_RS09190	PF07119	SH05_RS09190
SH05_RS09195	PF13984	SH05_RS09195
SH05_RS09205	PF07690	Major Facilitator Superfamily
SH05_RS09210	PF03279	SH05_RS09210
SH05_RS09215	PF00581	Rhodanese-like domain
SH05_RS09215	PF12368	SH05_RS09215
SH05_RS09220	PF04264	YceI-like domain
SH05_RS09225	PF01292	Prokaryotic cytochrome b561
SH05_RS09230	PF10968	SH05_RS09230
SH05_RS09235	PF01266	FAD dependent oxidoreductase
SH05_RS09240	PF13991	SH05_RS09240
SH05_RS09245	PF06183	DinI-like family
SH05_RS09250	PF01979	Amidohydrolase family
SH05_RS09255	PF07273	Protein of unknown function (DUF1439)
SH05_RS09260	PF04399	Glutaredoxin 2, C terminal domain
SH05_RS09260	PF13417	Glutathione S-transferase, N-terminal domain
SH05_RS09265	PF07690	Major Facilitator Superfamily
SH05_RS09270	PF13302	Acetyltransferase (GNAT) domain
SH05_RS09275	PF04337	Protein of unknown function, DUF480
SH05_RS09280	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
SH05_RS09285	PF03023	SH05_RS09285
SH05_RS09290	PF05130	FlgN protein
SH05_RS09295	PF04316	Anti-sigma-28 factor, FlgM
SH05_RS09300	PF13144	SAF-like
SH05_RS09305	PF00460	Flagella basal body rod protein
SH05_RS09310	PF00460	Flagella basal body rod protein
SH05_RS09310	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
SH05_RS09315	PF03963	SH05_RS09315
SH05_RS09315	PF13860	FlgD Ig-like domain
SH05_RS09315	PF13861	FlgD Tudor-like domain
SH05_RS09320	PF00460	Flagella basal body rod protein
SH05_RS09320	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
SH05_RS09320	PF07559	Flagellar basal body protein FlaE
SH05_RS09325	PF00460	Flagella basal body rod protein
SH05_RS09325	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
SH05_RS09330	PF00460	Flagella basal body rod protein
SH05_RS09330	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
SH05_RS09335	PF02107	SH05_RS09335
SH05_RS09340	PF02119	SH05_RS09340
SH05_RS09345	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
SH05_RS09345	PF10135	SH05_RS09345
SH05_RS09350	PF00460	Flagella basal body rod protein
SH05_RS09350	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
SH05_RS09355	PF00669	Bacterial flagellin N-terminal helical region
SH05_RS09360	PF00575	S1 RNA binding domain
SH05_RS09360	PF10150	Ribonuclease E/G family
SH05_RS09360	PF12111	Polyribonucleotide phosphorylase C terminal
SH05_RS09365	PF10848	SH05_RS09365
SH05_RS09370	PF00849	RNA pseudouridylate synthase
SH05_RS09370	PF01479	S4 domain
SH05_RS09375	PF02545	Maf-like protein
SH05_RS09380	PF02620	SH05_RS09380
SH05_RS09385	PF01783	Ribosomal L32p protein family
SH05_RS09390	PF02504	Fatty acid synthesis protein
SH05_RS09395	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
SH05_RS09395	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
SH05_RS09400	PF00698	Acyl transferase domain
SH05_RS09405	PF13561	Enoyl-(Acyl carrier protein) reductase
SH05_RS09410	PF00550	Phosphopantetheine attachment site
SH05_RS09415	PF00109	Beta-ketoacyl synthase, N-terminal domain
SH05_RS09415	PF02801	Beta-ketoacyl synthase, C-terminal domain
SH05_RS09420	PF01063	Aminotransferase class IV
SH05_RS09425	PF02618	YceG-like family
SH05_RS09430	PF02223	Thymidylate kinase
SH05_RS09435	PF09115	DNA polymerase III, delta subunit, C terminal
SH05_RS09435	PF13177	DNA polymerase III, delta subunit
SH05_RS09440	PF01026	TatD related DNase
SH05_RS09445	PF00367	phosphotransferase system, EIIB
SH05_RS09445	PF02378	Phosphotransferase system, EIIC
SH05_RS09450	PF00593	TonB dependent receptor
SH05_RS09450	PF07715	TonB-dependent Receptor Plug Domain
SH05_RS09455	PF01230	HIT domain
SH05_RS09460	PF07233	Protein of unknown function (DUF1425)
SH05_RS09465	PF13036	Protein of unknown function (DUF3897)
SH05_RS09470	PF01636	Phosphotransferase enzyme family
SH05_RS09475	PF00933	Glycosyl hydrolase family 3 N terminal domain
SH05_RS09480	PF05728	Uncharacterised protein family (UPF0227)
SH05_RS09485	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SH05_RS09490	PF05433	SH05_RS09490
SH05_RS09495	PF00440	Bacterial regulatory proteins, tetR family
SH05_RS09500	PF07338	Protein of unknown function (DUF1471)
SH05_RS09505	PF01476	LysM domain
SH05_RS09505	PF03734	L,D-transpeptidase catalytic domain
SH05_RS09510	PF00270	DEAD/DEAH box helicase
SH05_RS09510	PF00271	Helicase conserved C-terminal domain
SH05_RS09510	PF02559	CarD-like/TRCF domain
SH05_RS09510	PF03461	TRCF domain
SH05_RS09515	PF01757	SH05_RS09515
SH05_RS09520	PF02687	SH05_RS09520
SH05_RS09520	PF12704	MacB-like periplasmic core domain
SH05_RS09525	PF00005	ABC transporter
SH05_RS09530	PF02687	SH05_RS09530
SH05_RS09530	PF12704	MacB-like periplasmic core domain
SH05_RS09535	PF00480	ROK family
SH05_RS09540	PF02146	Sir2 family
SH05_RS09545	PF04536	TLP18
SH05_RS09550	PF12158	SH05_RS09550
SH05_RS09555	PF13343	Bacterial extracellular solute-binding protein
SH05_RS09560	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS09565	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS09570	PF00005	ABC transporter
SH05_RS09570	PF08402	TOBE domain
SH05_RS09580	PF01546	Peptidase family M20/M25/M40
SH05_RS09580	PF07687	Peptidase dimerisation domain
SH05_RS09585	PF08007	Cupin superfamily protein
SH05_RS09590	PF00672	HAMP domain
SH05_RS09590	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH05_RS09590	PF08918	PhoQ Sensor
SH05_RS09595	PF00072	Response regulator receiver domain
SH05_RS09595	PF00486	Transcriptional regulatory protein, C terminal
SH05_RS09600	PF00206	Lyase
SH05_RS09600	PF08328	Adenylosuccinate lyase C-terminal
SH05_RS09605	PF04356	Protein of unknown function (DUF489)
SH05_RS09610	PF03054	tRNA methyl transferase
SH05_RS09615	PF00293	NUDIX domain
SH05_RS09620	PF00849	RNA pseudouridylate synthase
SH05_RS09625	PF00180	Isocitrate/isopropylmalate dehydrogenase
SH05_RS09630	PF13489	Methyltransferase domain
SH05_RS09640	PF10463	SH05_RS09640
SH05_RS09645	PF00589	Phage integrase family
SH05_RS09645	PF09003	Bacteriophage lambda integrase, N-terminal domain
SH05_RS09650	PF07825	Excisionase-like protein
SH05_RS09660	PF00717	Peptidase S24-like
SH05_RS09665	PF15943	SH05_RS09665
SH05_RS09680	PF03354	SH05_RS09680
SH05_RS09680	PF13730	SH05_RS09680
SH05_RS09690	PF04860	Phage portal protein
SH05_RS09695	PF04865	SH05_RS09695
SH05_RS09700	PF10076	SH05_RS09700
SH05_RS09705	PF07484	Phage Tail Collar Domain
SH05_RS09710	PF02413	SH05_RS09710
SH05_RS09715	PF02413	SH05_RS09715
SH05_RS09725	PF00239	Resolvase, N terminal domain
SH05_RS09725	PF02796	Helix-turn-helix domain of resolvase
SH05_RS09730	PF01844	HNH endonuclease
SH05_RS09745	PF07166	Protein of unknown function (DUF1398)
SH05_RS09750	PF13411	MerR HTH family regulatory protein
SH05_RS09755	PF00563	EAL domain
SH05_RS09755	PF04940	Sensors of blue-light using FAD
SH05_RS09760	PF10798	Biofilm development protein YmgB/AriR
SH05_RS09770	PF10798	Biofilm development protein YmgB/AriR
SH05_RS09780	PF00563	EAL domain
SH05_RS09780	PF12792	SH05_RS09780
SH05_RS09805	PF16456	SH05_RS09805
SH05_RS09810	PF13436	SH05_RS09810
SH05_RS09810	PF13488	SH05_RS09810
SH05_RS09825	PF03776	Septum formation topological specificity factor MinE
SH05_RS09830	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
SH05_RS09835	PF03775	Septum formation inhibitor MinC, C-terminal domain
SH05_RS09835	PF05209	Septum formation inhibitor MinC, N-terminal domain
SH05_RS09840	PF05666	SH05_RS09840
SH05_RS09845	PF04151	Bacterial pre-peptidase C-terminal domain
SH05_RS09855	PF05166	YcgL domain
SH05_RS09860	PF01557	Fumarylacetoacetate (FAA) hydrolase family
SH05_RS09865	PF03692	SH05_RS09865
SH05_RS09870	PF06109	Haemolysin E (HlyE)
SH05_RS09875	PF00717	Peptidase S24-like
SH05_RS09880	PF00817	impB/mucB/samB family
SH05_RS09880	PF11798	IMS family HHH motif
SH05_RS09880	PF11799	impB/mucB/samB family C-terminal domain
SH05_RS09880	PF13438	SH05_RS09880
SH05_RS09885	PF02600	Disulfide bond formation protein DsbB
SH05_RS09890	PF06450	SH05_RS09890
SH05_RS09895	PF00392	Bacterial regulatory proteins, gntR family
SH05_RS09895	PF07840	FadR C-terminal domain
SH05_RS09900	PF04293	SH05_RS09900
SH05_RS09905	PF01266	FAD dependent oxidoreductase
SH05_RS09910	PF00842	Alanine racemase, C-terminal domain
SH05_RS09910	PF01168	Alanine racemase, N-terminal domain
SH05_RS09915	PF00999	Sodium/hydrogen exchanger family
SH05_RS09915	PF02080	TrkA-C domain
SH05_RS09915	PF03471	Transporter associated domain
SH05_RS09920	PF02016	LD-carboxypeptidase
SH05_RS09925	PF01464	Transglycosylase SLT domain
SH05_RS09930	PF07238	PilZ domain
SH05_RS09930	PF07317	Flagellar regulator YcgR
SH05_RS09935	PF04226	SH05_RS09935
SH05_RS09945	PF01204	Trehalase
SH05_RS09950	PF00381	PTS HPr component phosphorylation site
SH05_RS09950	PF00391	PEP-utilising enzyme, mobile domain
SH05_RS09950	PF03610	PTS system fructose IIA component
SH05_RS09950	PF05524	PEP-utilising enzyme, N-terminal
SH05_RS09955	PF02734	DAK2 domain
SH05_RS09960	PF02733	Dak1 domain
SH05_RS09965	PF00158	Sigma-54 interaction domain
SH05_RS09965	PF00989	PAS fold
SH05_RS09965	PF02954	Bacterial regulatory protein, Fis family
SH05_RS09970	PF03212	Pertactin
SH05_RS09970	PF03797	Autotransporter beta-domain
SH05_RS09980	PF01926	50S ribosome-binding GTPase
SH05_RS09980	PF06071	Protein of unknown function (DUF933)
SH05_RS09985	PF01195	Peptidyl-tRNA hydrolase
SH05_RS09990	PF10762	SH05_RS09990
SH05_RS09995	PF00916	SH05_RS09995
SH05_RS09995	PF01740	STAS domain
SH05_RS10000	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
SH05_RS10000	PF14572	Phosphoribosyl synthetase-associated domain
SH05_RS10005	PF00288	GHMP kinases N terminal domain
SH05_RS10005	PF08544	GHMP kinases C terminal
SH05_RS10010	PF03550	Outer membrane lipoprotein LolB
SH05_RS10015	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
SH05_RS10015	PF01488	Shikimate / quinate 5-dehydrogenase
SH05_RS10015	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
SH05_RS10020	PF00472	RF-1 domain
SH05_RS10020	PF03462	PCRF domain
SH05_RS10025	PF13847	Methyltransferase domain
SH05_RS10030	PF04247	SH05_RS10030
SH05_RS10035	PF13369	SH05_RS10035
SH05_RS10035	PF13371	Tetratricopeptide repeat
SH05_RS10040	PF00793	DAHP synthetase I family
SH05_RS10045	PF13940	SH05_RS10045
SH05_RS10050	PF13940	SH05_RS10050
SH05_RS10055	PF13940	SH05_RS10055
SH05_RS10060	PF01699	Sodium/calcium exchanger protein
SH05_RS10065	PF06150	ChaB
SH05_RS10070	PF04752	SH05_RS10070
SH05_RS10075	PF02635	DsrE/DsrF-like family
SH05_RS10080	PF11924	Protein of unknown function (DUF3442)
SH05_RS10085	PF00072	Response regulator receiver domain
SH05_RS10085	PF00196	Bacterial regulatory proteins, luxR family
SH05_RS10090	PF00672	HAMP domain
SH05_RS10090	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH05_RS10090	PF07730	Histidine kinase
SH05_RS10090	PF13675	Type IV pili methyl-accepting chemotaxis transducer N-term
SH05_RS10100	PF07690	Major Facilitator Superfamily
SH05_RS10105	PF00384	Molybdopterin oxidoreductase
SH05_RS10105	PF01568	Molydopterin dinucleotide binding domain
SH05_RS10105	PF14710	Respiratory nitrate reductase alpha N-terminal
SH05_RS10110	PF13247	4Fe-4S dicluster domain
SH05_RS10110	PF14711	Respiratory nitrate reductase beta C-terminal
SH05_RS10115	PF02613	Nitrate reductase delta subunit
SH05_RS10120	PF02665	Nitrate reductase gamma subunit
SH05_RS10140	PF00551	Formyl transferase
SH05_RS10140	PF01842	ACT domain
SH05_RS10145	PF02810	SEC-C motif
SH05_RS10150	PF01734	Patatin-like phospholipase
SH05_RS10160	PF00483	Nucleotidyl transferase
SH05_RS10165	PF00816	H-NS histone family
SH05_RS10170	PF00265	Thymidine kinase
SH05_RS10175	PF01609	Transposase DDE domain
SH05_RS10185	PF00171	Aldehyde dehydrogenase family
SH05_RS10185	PF00465	Iron-containing alcohol dehydrogenase
SH05_RS10190	PF01914	SH05_RS10190
SH05_RS10195	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
SH05_RS10200	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS10205	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS10205	PF12911	SH05_RS10205
SH05_RS10210	PF00005	ABC transporter
SH05_RS10210	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
SH05_RS10215	PF00005	ABC transporter
SH05_RS10215	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
SH05_RS10220	PF04269	Protein of unknown function, DUF440
SH05_RS10225	PF13091	PLD-like domain
SH05_RS10225	PF13396	SH05_RS10225
SH05_RS10235	PF02254	TrkA-N domain
SH05_RS10235	PF07885	Ion channel
SH05_RS10240	PF03795	YCII-related domain
SH05_RS10245	PF03544	Gram-negative bacterial TonB protein C-terminal
SH05_RS10245	PF16031	SH05_RS10245
SH05_RS10250	PF03061	Thioesterase superfamily
SH05_RS10255	PF04279	SH05_RS10255
SH05_RS10260	PF06790	SH05_RS10260
SH05_RS10265	PF03922	OmpW family
SH05_RS10270	PF05974	Domain of unknown function (DUF892)
SH05_RS10275	PF05974	Domain of unknown function (DUF892)
SH05_RS10280	PF10685	SH05_RS10280
SH05_RS10285	PF00290	Tryptophan synthase alpha chain
SH05_RS10290	PF00291	Pyridoxal-phosphate dependent enzyme
SH05_RS10295	PF00218	Indole-3-glycerol phosphate synthase
SH05_RS10295	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
SH05_RS10300	PF00117	Glutamine amidotransferase class-I
SH05_RS10300	PF00591	Glycosyl transferase family, a/b domain
SH05_RS10300	PF02885	Glycosyl transferase family, helical bundle domain
SH05_RS10305	PF00425	chorismate binding enzyme
SH05_RS10305	PF04715	Anthranilate synthase component I, N terminal region
SH05_RS10310	PF02811	PHP domain
SH05_RS10315	PF01300	Telomere recombination
SH05_RS10320	PF09972	SH05_RS10320
SH05_RS10325	PF00849	RNA pseudouridylate synthase
SH05_RS10325	PF01479	S4 domain
SH05_RS10330	PF02572	ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
SH05_RS10330	PF12557	Cob(I)alamin adenosyltransferase N terminal
SH05_RS10335	PF00106	short chain dehydrogenase
SH05_RS10345	PF01343	Peptidase family S49
SH05_RS10345	PF08496	SH05_RS10345
SH05_RS10350	PF10692	Protein of unknown function (DUF2498)
SH05_RS10360	PF01131	DNA topoisomerase
SH05_RS10360	PF01396	SH05_RS10360
SH05_RS10360	PF01751	Toprim domain
SH05_RS10360	PF08272	Topoisomerase I zinc-ribbon-like
SH05_RS10365	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS10365	PF03466	LysR substrate binding domain
SH05_RS10385	PF00330	Aconitase family (aconitate hydratase)
SH05_RS10385	PF00694	Aconitase C-terminal domain
SH05_RS10390	PF00925	GTP cyclohydrolase II
SH05_RS10395	PF01569	PAP2 superfamily
SH05_RS10400	PF06305	SH05_RS10400
SH05_RS10405	PF14559	Tetratricopeptide repeat
SH05_RS10410	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
SH05_RS10415	PF01253	Translation initiation factor SUI1
SH05_RS10420	PF05433	SH05_RS10420
SH05_RS10425	PF00455	SH05_RS10425
SH05_RS10425	PF08220	DeoR-like helix-turn-helix domain
SH05_RS10435	PF00563	EAL domain
SH05_RS10435	PF00990	GGDEF domain
SH05_RS10435	PF13426	PAS domain
SH05_RS10445	PF00575	S1 RNA binding domain
SH05_RS10445	PF00773	RNB domain
SH05_RS10445	PF08206	Ribonuclease B OB domain
SH05_RS10455	PF13561	Enoyl-(Acyl carrier protein) reductase
SH05_RS10460	PF04480	Protein of unknown function (DUF559)
SH05_RS10465	PF00005	ABC transporter
SH05_RS10470	PF00005	ABC transporter
SH05_RS10470	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
SH05_RS10475	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS10475	PF12911	SH05_RS10475
SH05_RS10480	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS10485	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
SH05_RS10495	PF10820	SH05_RS10495
SH05_RS10500	PF00324	Amino acid permease
SH05_RS10505	PF00120	Glutamine synthetase, catalytic domain
SH05_RS10510	PF07722	Peptidase C26
SH05_RS10515	PF01381	Helix-turn-helix
SH05_RS10515	PF07883	Cupin domain
SH05_RS10520	PF00171	Aldehyde dehydrogenase family
SH05_RS10525	PF01266	FAD dependent oxidoreductase
SH05_RS10530	PF00202	Aminotransferase class-III
SH05_RS10535	PF00158	Sigma-54 interaction domain
SH05_RS10535	PF02954	Bacterial regulatory protein, Fis family
SH05_RS10540	PF04012	SH05_RS10540
SH05_RS10545	PF06667	SH05_RS10545
SH05_RS10550	PF04024	SH05_RS10550
SH05_RS10555	PF09584	SH05_RS10555
SH05_RS10560	PF00581	Rhodanese-like domain
SH05_RS10565	PF00128	Alpha amylase, catalytic domain
SH05_RS10570	PF01547	Bacterial extracellular solute-binding protein
SH05_RS10575	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS10580	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS10585	PF00107	Zinc-binding dehydrogenase
SH05_RS10590	PF01261	Xylose isomerase-like TIM barrel
SH05_RS10595	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
SH05_RS10595	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
SH05_RS10600	PF03632	Glycosyl hydrolase family 65 central catalytic domain
SH05_RS10600	PF03633	Glycosyl hydrolase family 65, C-terminal domain
SH05_RS10600	PF03636	Glycosyl hydrolase family 65, N-terminal domain
SH05_RS10605	PF13419	Haloacid dehalogenase-like hydrolase
SH05_RS10615	PF09381	Outer membrane protein G (OmpG)
SH05_RS10620	PF00356	Bacterial regulatory proteins, lacI family
SH05_RS10620	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
SH05_RS10625	PF04317	SH05_RS10625
SH05_RS10630	PF05128	SH05_RS10630
SH05_RS10635	PF00158	Sigma-54 interaction domain
SH05_RS10635	PF13188	PAS domain
SH05_RS10640	PF08534	Redoxin
SH05_RS10645	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
SH05_RS10645	PF13378	Enolase C-terminal domain-like
SH05_RS10650	PF00246	Zinc carboxypeptidase
SH05_RS10660	PF12146	Putative lysophospholipase
SH05_RS10665	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS10665	PF03466	LysR substrate binding domain
SH05_RS10675	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
SH05_RS10680	PF00924	Mechanosensitive ion channel
SH05_RS10685	PF01609	Transposase DDE domain
SH05_RS10685	PF05598	SH05_RS10685
SH05_RS10690	PF10749	SH05_RS10690
SH05_RS10695	PF00582	Universal stress protein family
SH05_RS10700	PF00027	Cyclic nucleotide-binding domain
SH05_RS10700	PF13545	Crp-like helix-turn-helix domain
SH05_RS10705	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
SH05_RS10705	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
SH05_RS10710	PF03806	SH05_RS10710
SH05_RS10720	PF01546	Peptidase family M20/M25/M40
SH05_RS10725	PF01546	Peptidase family M20/M25/M40
SH05_RS10725	PF07687	Peptidase dimerisation domain
SH05_RS10730	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS10730	PF03466	LysR substrate binding domain
SH05_RS10740	PF01713	Smr domain
SH05_RS10745	PF00990	GGDEF domain
SH05_RS10745	PF08448	PAS fold
SH05_RS10750	PF01544	CorA-like Mg2+ transporter protein
SH05_RS10760	PF00270	DEAD/DEAH box helicase
SH05_RS10760	PF00271	Helicase conserved C-terminal domain
SH05_RS10760	PF03880	DbpA RNA binding domain
SH05_RS10765	PF01171	PP-loop family
SH05_RS10775	PF06806	Putative excisionase (DUF1233)
SH05_RS10780	PF06688	SH05_RS10780
SH05_RS10785	PF14354	SH05_RS10785
SH05_RS10790	PF03837	SH05_RS10790
SH05_RS10795	PF06630	SH05_RS10795
SH05_RS10795	PF12684	PDDEXK-like domain of unknown function (DUF3799)
SH05_RS10805	PF04181	Rtr1/RPAP2 family
SH05_RS10815	PF14163	SH05_RS10815
SH05_RS10825	PF15943	SH05_RS10825
SH05_RS10830	PF06254	Protein of unknown function (DUF1019)
SH05_RS10835	PF07120	SH05_RS10835
SH05_RS10840	PF01695	IstB-like ATP binding protein
SH05_RS10845	PF07789	SH05_RS10845
SH05_RS10850	PF03245	SH05_RS10850
SH05_RS10855	PF02386	Cation transport protein
SH05_RS10860	PF02195	ParB-like nuclease domain
SH05_RS10875	PF06791	SH05_RS10875
SH05_RS10880	PF06316	Enterobacterial Ail/Lom protein
SH05_RS10885	PF01609	Transposase DDE domain
SH05_RS10885	PF05598	SH05_RS10885
SH05_RS10890	PF06316	Enterobacterial Ail/Lom protein
SH05_RS10905	PF03335	Phage tail fibre repeat
SH05_RS10905	PF03406	SH05_RS10905
SH05_RS10905	PF07484	Phage Tail Collar Domain
SH05_RS10910	PF02413	SH05_RS10910
SH05_RS10915	PF00239	Resolvase, N terminal domain
SH05_RS10915	PF02796	Helix-turn-helix domain of resolvase
SH05_RS10925	PF00582	Universal stress protein family
SH05_RS10930	PF00267	Gram-negative porin
SH05_RS10935	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
SH05_RS10935	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
SH05_RS10935	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
SH05_RS10935	PF10371	Domain of unknown function
SH05_RS10935	PF13484	SH05_RS10935
SH05_RS10935	PF17147	SH05_RS10935
SH05_RS10940	PF03891	SH05_RS10940
SH05_RS10945	PF03724	META domain
SH05_RS10950	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
SH05_RS10950	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
SH05_RS10955	PF11739	SH05_RS10955
SH05_RS10960	PF13617	SH05_RS10960
SH05_RS10965	PF07027	SH05_RS10965
SH05_RS10970	PF12833	Helix-turn-helix domain
SH05_RS10970	PF14525	SH05_RS10970
SH05_RS10975	PF00171	Aldehyde dehydrogenase family
SH05_RS10980	PF01179	Copper amine oxidase, enzyme domain
SH05_RS10980	PF02727	Copper amine oxidase, N2 domain
SH05_RS10980	PF02728	Copper amine oxidase, N3 domain
SH05_RS10980	PF07833	Copper amine oxidase N-terminal domain
SH05_RS10985	PF00171	Aldehyde dehydrogenase family
SH05_RS10985	PF01575	MaoC like domain
SH05_RS10990	PF05138	Phenylacetic acid catabolic protein
SH05_RS10995	PF06243	Phenylacetic acid degradation B
SH05_RS11000	PF05138	Phenylacetic acid catabolic protein
SH05_RS11005	PF01883	Domain of unknown function DUF59
SH05_RS11010	PF00111	2Fe-2S iron-sulfur cluster binding domain
SH05_RS11010	PF00175	Oxidoreductase NAD-binding domain
SH05_RS11010	PF00970	Oxidoreductase FAD-binding domain
SH05_RS11015	PF00378	Enoyl-CoA hydratase/isomerase family
SH05_RS11020	PF00378	Enoyl-CoA hydratase/isomerase family
SH05_RS11025	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
SH05_RS11025	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
SH05_RS11030	PF03061	Thioesterase superfamily
SH05_RS11035	PF00108	Thiolase, N-terminal domain
SH05_RS11035	PF02803	Thiolase, C-terminal domain
SH05_RS11040	PF00501	AMP-binding enzyme
SH05_RS11040	PF14535	AMP-binding enzyme C-terminal domain
SH05_RS11045	PF07848	PaaX-like protein
SH05_RS11045	PF08223	PaaX-like protein C-terminal domain
SH05_RS11050	PF00132	Bacterial transferase hexapeptide (six repeats)
SH05_RS11060	PF00665	Integrase core domain
SH05_RS11060	PF13276	SH05_RS11060
SH05_RS11065	PF01527	Transposase
SH05_RS11070	PF00665	Integrase core domain
SH05_RS11070	PF13936	Helix-turn-helix domain
SH05_RS11075	PF03797	Autotransporter beta-domain
SH05_RS11080	PF00248	Aldo/keto reductase family
SH05_RS11085	PF10971	SH05_RS11085
SH05_RS11090	PF01066	CDP-alcohol phosphatidyltransferase
SH05_RS11095	PF01148	Cytidylyltransferase family
SH05_RS11100	PF12146	Putative lysophospholipase
SH05_RS11100	PF12147	SH05_RS11100
SH05_RS11105	PF00782	Dual specificity phosphatase, catalytic domain
SH05_RS11110	PF02525	Flavodoxin-like fold
SH05_RS11115	PF00270	DEAD/DEAH box helicase
SH05_RS11115	PF00271	Helicase conserved C-terminal domain
SH05_RS11115	PF04408	Helicase associated domain (HA2)
SH05_RS11115	PF07717	Oligonucleotide/oligosaccharide-binding (OB)-fold
SH05_RS11115	PF11898	SH05_RS11115
SH05_RS11120	PF02698	DUF218 domain
SH05_RS11125	PF00171	Aldehyde dehydrogenase family
SH05_RS11130	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
SH05_RS11135	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
SH05_RS11140	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SH05_RS11145	PF01292	Prokaryotic cytochrome b561
SH05_RS11155	PF01848	SH05_RS11155
SH05_RS11160	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SH05_RS11160	PF00672	HAMP domain
SH05_RS11160	PF02203	Tar ligand binding domain homologue
SH05_RS11165	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS11165	PF03466	LysR substrate binding domain
SH05_RS11170	PF07063	Domain of unknown function (DUF1338)
SH05_RS11175	PF04349	Periplasmic glucan biosynthesis protein, MdoG
SH05_RS11185	PF04325	Protein of unknown function (DUF465)
SH05_RS11190	PF13302	Acetyltransferase (GNAT) domain
SH05_RS11200	PF03595	Voltage-dependent anion channel
SH05_RS11205	PF03848	Tellurite resistance protein TehB
SH05_RS11210	PF11769	SH05_RS11210
SH05_RS11220	PF01797	Transposase IS200 like
SH05_RS11225	PF01385	SH05_RS11225
SH05_RS11225	PF07282	SH05_RS11225
SH05_RS11225	PF12323	SH05_RS11225
SH05_RS11230	PF03594	SH05_RS11230
SH05_RS11235	PF01381	Helix-turn-helix
SH05_RS11235	PF07883	Cupin domain
SH05_RS11240	PF01136	SH05_RS11240
SH05_RS11240	PF12392	SH05_RS11240
SH05_RS11245	PF10829	SH05_RS11245
SH05_RS11250	PF07927	YcfA-like protein
SH05_RS11255	PF01381	Helix-turn-helix
SH05_RS11255	PF15919	SH05_RS11255
SH05_RS11260	PF00155	Aminotransferase class I and II
SH05_RS11260	PF00392	Bacterial regulatory proteins, gntR family
SH05_RS11265	PF13416	Bacterial extracellular solute-binding protein
SH05_RS11270	PF00005	ABC transporter
SH05_RS11270	PF08402	TOBE domain
SH05_RS11275	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS11280	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS11285	PF00171	Aldehyde dehydrogenase family
SH05_RS11295	PF10753	SH05_RS11295
SH05_RS11300	PF10735	SH05_RS11300
SH05_RS11305	PF04657	SH05_RS11305
SH05_RS11310	PF13420	Acetyltransferase (GNAT) domain
SH05_RS11315	PF00107	Zinc-binding dehydrogenase
SH05_RS11315	PF16884	SH05_RS11315
SH05_RS11320	PF00392	Bacterial regulatory proteins, gntR family
SH05_RS11320	PF07729	FCD domain
SH05_RS11325	PF00593	TonB dependent receptor
SH05_RS11325	PF07715	TonB-dependent Receptor Plug Domain
SH05_RS11335	PF00324	Amino acid permease
SH05_RS11340	PF13417	Glutathione S-transferase, N-terminal domain
SH05_RS11350	PF03527	SH05_RS11350
SH05_RS11360	PF01609	Transposase DDE domain
SH05_RS11360	PF13808	SH05_RS11360
SH05_RS11365	PF01609	Transposase DDE domain
SH05_RS11365	PF13808	SH05_RS11365
SH05_RS11370	PF01361	Tautomerase enzyme
SH05_RS11375	PF01613	Flavin reductase like domain
SH05_RS11380	PF00797	N-acetyltransferase
SH05_RS11385	PF02567	Phenazine biosynthesis-like protein
SH05_RS11390	PF02665	Nitrate reductase gamma subunit
SH05_RS11395	PF02613	Nitrate reductase delta subunit
SH05_RS11400	PF13247	4Fe-4S dicluster domain
SH05_RS11400	PF14711	Respiratory nitrate reductase beta C-terminal
SH05_RS11405	PF00384	Molybdopterin oxidoreductase
SH05_RS11405	PF01568	Molydopterin dinucleotide binding domain
SH05_RS11405	PF14710	Respiratory nitrate reductase alpha N-terminal
SH05_RS11410	PF07690	Major Facilitator Superfamily
SH05_RS11420	PF00267	Gram-negative porin
SH05_RS11425	PF00892	EamA-like transporter family
SH05_RS11430	PF00384	Molybdopterin oxidoreductase
SH05_RS11430	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
SH05_RS11435	PF00384	Molybdopterin oxidoreductase
SH05_RS11435	PF01568	Molydopterin dinucleotide binding domain
SH05_RS11440	PF09163	Formate dehydrogenase N, transmembrane
SH05_RS11440	PF12800	4Fe-4S binding domain
SH05_RS11440	PF13247	4Fe-4S dicluster domain
SH05_RS11445	PF01292	Prokaryotic cytochrome b561
SH05_RS11450	PF01381	Helix-turn-helix
SH05_RS11455	PF00107	Zinc-binding dehydrogenase
SH05_RS11455	PF08240	Alcohol dehydrogenase GroES-like domain
SH05_RS11460	PF00390	Malic enzyme, N-terminal domain
SH05_RS11460	PF03949	Malic enzyme, NAD binding domain
SH05_RS11465	PF08136	SH05_RS11465
SH05_RS11470	PF10684	SH05_RS11470
SH05_RS11475	PF02566	OsmC-like protein
SH05_RS11480	PF00005	ABC transporter
SH05_RS11480	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
SH05_RS11485	PF00005	ABC transporter
SH05_RS11485	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
SH05_RS11490	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS11490	PF12911	SH05_RS11490
SH05_RS11495	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS11500	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
SH05_RS11505	PF01427	D-ala-D-ala dipeptidase
SH05_RS11510	PF00563	EAL domain
SH05_RS11510	PF00990	GGDEF domain
SH05_RS11510	PF13426	PAS domain
SH05_RS11515	PF00990	GGDEF domain
SH05_RS11515	PF11563	Protoglobin
SH05_RS11520	PF02638	SH05_RS11520
SH05_RS11525	PF13520	Amino acid permease
SH05_RS11530	PF00282	Pyridoxal-dependent decarboxylase conserved domain
SH05_RS11540	PF00675	Insulinase (Peptidase family M16)
SH05_RS11540	PF05193	Peptidase M16 inactive domain
SH05_RS11545	PF07715	TonB-dependent Receptor Plug Domain
SH05_RS11550	PF00005	ABC transporter
SH05_RS11550	PF06472	SH05_RS11550
SH05_RS11555	PF04055	Radical SAM superfamily
SH05_RS11555	PF13186	Iron-sulfur cluster-binding domain
SH05_RS11555	PF13353	4Fe-4S single cluster domain
SH05_RS11560	PF00884	Sulfatase
SH05_RS11565	PF12833	Helix-turn-helix domain
SH05_RS11570	PF17073	SH05_RS11570
SH05_RS11575	PF00384	Molybdopterin oxidoreductase
SH05_RS11575	PF01568	Molydopterin dinucleotide binding domain
SH05_RS11580	PF09160	FimH, mannose binding
SH05_RS11590	PF00419	Fimbrial protein
SH05_RS11595	PF00577	Outer membrane usher protein
SH05_RS11595	PF13953	PapC C-terminal domain
SH05_RS11605	PF07804	HipA-like C-terminal domain
SH05_RS11605	PF07805	HipA-like N-terminal domain
SH05_RS11605	PF13657	HipA N-terminal domain
SH05_RS11610	PF01381	Helix-turn-helix
SH05_RS11615	PF03212	Pertactin
SH05_RS11615	PF03797	Autotransporter beta-domain
SH05_RS11620	PF13018	SH05_RS11620
SH05_RS11625	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
SH05_RS11625	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
SH05_RS11630	PF04198	Putative sugar-binding domain
SH05_RS11635	PF00005	ABC transporter
SH05_RS11640	PF02653	SH05_RS11640
SH05_RS11645	PF02653	SH05_RS11645
SH05_RS11650	PF13407	Periplasmic binding protein domain
SH05_RS11655	PF01791	DeoC/LacD family aldolase
SH05_RS11660	PF03992	Antibiotic biosynthesis monooxygenase
SH05_RS11665	PF13489	Methyltransferase domain
SH05_RS11670	PF01062	SH05_RS11670
SH05_RS11680	PF01232	Mannitol dehydrogenase Rossmann domain
SH05_RS11680	PF08125	Mannitol dehydrogenase C-terminal domain
SH05_RS11685	PF00990	GGDEF domain
SH05_RS11690	PF13811	SH05_RS11690
SH05_RS11695	PF04960	Glutaminase
SH05_RS11700	PF00171	Aldehyde dehydrogenase family
SH05_RS11705	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS11705	PF03466	LysR substrate binding domain
SH05_RS11715	PF07690	Major Facilitator Superfamily
SH05_RS11720	PF01914	SH05_RS11720
SH05_RS11725	PF01047	MarR family
SH05_RS11730	PF12833	Helix-turn-helix domain
SH05_RS11735	PF13999	SH05_RS11735
SH05_RS11740	PF00892	EamA-like transporter family
SH05_RS11745	PF07690	Major Facilitator Superfamily
SH05_RS11755	PF00990	GGDEF domain
SH05_RS11755	PF13682	Chemoreceptor zinc-binding domain
SH05_RS11760	PF04076	Bacterial OB fold (BOF) protein
SH05_RS11765	PF02464	Competence-damaged protein
SH05_RS11770	PF01432	Peptidase family M3
SH05_RS11775	PF00106	short chain dehydrogenase
SH05_RS11780	PF00392	Bacterial regulatory proteins, gntR family
SH05_RS11780	PF07729	FCD domain
SH05_RS11785	PF14001	SH05_RS11785
SH05_RS11790	PF01232	Mannitol dehydrogenase Rossmann domain
SH05_RS11790	PF08125	Mannitol dehydrogenase C-terminal domain
SH05_RS11795	PF00083	Sugar (and other) transporter
SH05_RS11795	PF07690	Major Facilitator Superfamily
SH05_RS11805	PF00239	Resolvase, N terminal domain
SH05_RS11805	PF02796	Helix-turn-helix domain of resolvase
SH05_RS11810	PF02413	SH05_RS11810
SH05_RS11815	PF03335	Phage tail fibre repeat
SH05_RS11815	PF07484	Phage Tail Collar Domain
SH05_RS11820	PF07471	Phage DNA packaging protein Nu1
SH05_RS11825	PF13132	SH05_RS11825
SH05_RS11830	PF07166	Protein of unknown function (DUF1398)
SH05_RS11835	PF08178	SH05_RS11835
SH05_RS11845	PF00313	'Cold-shock' DNA-binding domain
SH05_RS11850	PF10721	SH05_RS11850
SH05_RS11855	PF00959	Phage lysozyme
SH05_RS11860	PF07041	SH05_RS11860
SH05_RS11865	PF04971	SH05_RS11865
SH05_RS11870	PF00313	'Cold-shock' DNA-binding domain
SH05_RS11875	PF00313	'Cold-shock' DNA-binding domain
SH05_RS11880	PF03589	Antitermination protein
SH05_RS11885	PF06147	SH05_RS11885
SH05_RS11900	PF01848	SH05_RS11900
SH05_RS11905	PF05016	Plasmid stabilisation system protein
SH05_RS11910	PF04221	RelB antitoxin
SH05_RS11915	PF14282	SH05_RS11915
SH05_RS11925	PF14549	DNA-binding transcriptional regulator Cro
SH05_RS11930	PF01381	Helix-turn-helix
SH05_RS11935	PF07151	SH05_RS11935
SH05_RS11950	PF05358	SH05_RS11950
SH05_RS11955	PF07358	SH05_RS11955
SH05_RS11970	PF00589	Phage integrase family
SH05_RS11970	PF12167	SH05_RS11970
SH05_RS11975	PF00107	Zinc-binding dehydrogenase
SH05_RS11975	PF08240	Alcohol dehydrogenase GroES-like domain
SH05_RS11980	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
SH05_RS11980	PF13378	Enolase C-terminal domain-like
SH05_RS11985	PF02694	SH05_RS11985
SH05_RS11990	PF06932	SH05_RS11990
SH05_RS11995	PF13302	Acetyltransferase (GNAT) domain
SH05_RS12000	PF06788	SH05_RS12000
SH05_RS12005	PF06649	SH05_RS12005
SH05_RS12010	PF00384	Molybdopterin oxidoreductase
SH05_RS12010	PF01568	Molydopterin dinucleotide binding domain
SH05_RS12010	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
SH05_RS12015	PF00384	Molybdopterin oxidoreductase
SH05_RS12015	PF01568	Molydopterin dinucleotide binding domain
SH05_RS12015	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
SH05_RS12020	PF12800	4Fe-4S binding domain
SH05_RS12020	PF13247	4Fe-4S dicluster domain
SH05_RS12025	PF04976	SH05_RS12025
SH05_RS12030	PF02613	Nitrate reductase delta subunit
SH05_RS12035	PF00654	Voltage gated chloride channel
SH05_RS12040	PF13500	AAA domain
SH05_RS12045	PF00480	ROK family
SH05_RS12050	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS12050	PF03466	LysR substrate binding domain
SH05_RS12055	PF07690	Major Facilitator Superfamily
SH05_RS12070	PF00089	Trypsin
SH05_RS12075	PF00893	Small Multidrug Resistance protein
SH05_RS12080	PF00893	Small Multidrug Resistance protein
SH05_RS12085	PF01594	SH05_RS12085
SH05_RS12090	PF02233	NAD(P) transhydrogenase beta subunit
SH05_RS12095	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
SH05_RS12095	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
SH05_RS12095	PF12769	Domain of unknown function (DUF3814)
SH05_RS12100	PF07338	Protein of unknown function (DUF1471)
SH05_RS12105	PF13520	Amino acid permease
SH05_RS12110	PF13561	Enoyl-(Acyl carrier protein) reductase
SH05_RS12115	PF06942	SH05_RS12115
SH05_RS12120	PF00072	Response regulator receiver domain
SH05_RS12120	PF00486	Transcriptional regulatory protein, C terminal
SH05_RS12125	PF00512	His Kinase A (phospho-acceptor) domain
SH05_RS12125	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH05_RS12130	PF05472	DNA replication terminus site-binding protein (Ter protein)
SH05_RS12135	PF00206	Lyase
SH05_RS12135	PF10415	Fumarase C C-terminus
SH05_RS12140	PF05681	SH05_RS12140
SH05_RS12140	PF05683	Fumarase C-terminus
SH05_RS12145	PF01238	Phosphomannose isomerase type I
SH05_RS12150	PF06097	SH05_RS12150
SH05_RS12155	PF03573	outer membrane porin, OprD family
SH05_RS12160	PF13347	MFS/sugar transport protein
SH05_RS12165	PF00703	Glycosyl hydrolases family 2
SH05_RS12165	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
SH05_RS12165	PF02837	Glycosyl hydrolases family 2, sugar binding domain
SH05_RS12170	PF00440	Bacterial regulatory proteins, tetR family
SH05_RS12175	PF13561	Enoyl-(Acyl carrier protein) reductase
SH05_RS12180	PF00356	Bacterial regulatory proteins, lacI family
SH05_RS12180	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
SH05_RS12185	PF00367	phosphotransferase system, EIIB
SH05_RS12185	PF02378	Phosphotransferase system, EIIC
SH05_RS12190	PF00155	Aminotransferase class I and II
SH05_RS12195	PF00962	Adenosine/AMP deaminase
SH05_RS12200	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
SH05_RS12200	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
SH05_RS12210	PF05321	Haemolysin expression modulating protein
SH05_RS12215	PF10754	SH05_RS12215
SH05_RS12220	PF02508	SH05_RS12220
SH05_RS12225	PF04060	Putative Fe-S cluster
SH05_RS12225	PF14697	4Fe-4S dicluster domain
SH05_RS12230	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
SH05_RS12230	PF10531	SLBB domain
SH05_RS12230	PF12838	4Fe-4S dicluster domain
SH05_RS12230	PF13375	RnfC Barrel sandwich hybrid domain
SH05_RS12235	PF03116	SH05_RS12235
SH05_RS12240	PF04205	FMN-binding domain
SH05_RS12245	PF02508	SH05_RS12245
SH05_RS12250	PF00633	Helix-hairpin-helix motif
SH05_RS12250	PF00730	HhH-GPD superfamily base excision DNA repair protein
SH05_RS12250	PF10576	Iron-sulfur binding domain of endonuclease III
SH05_RS12260	PF00854	POT family
SH05_RS12265	PF00043	Glutathione S-transferase, C-terminal domain
SH05_RS12265	PF13409	Glutathione S-transferase, N-terminal domain
SH05_RS12270	PF08543	Phosphomethylpyrimidine kinase
SH05_RS12275	PF00579	tRNA synthetases class I (W and Y)
SH05_RS12275	PF01479	S4 domain
SH05_RS12280	PF01243	Pyridoxamine 5'-phosphate oxidase
SH05_RS12280	PF10590	Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
SH05_RS12285	PF09864	Membrane-bound lysozyme-inhibitor of c-type lysozyme
SH05_RS12290	PF03702	Uncharacterised protein family (UPF0075)
SH05_RS12295	PF05433	SH05_RS12295
SH05_RS12300	PF01047	MarR family
SH05_RS12305	PF07869	SH05_RS12305
SH05_RS12310	PF00529	HlyD family secretion protein
SH05_RS12310	PF16576	SH05_RS12310
SH05_RS12315	PF04632	SH05_RS12315
SH05_RS12320	PF00080	Copper/zinc superoxide dismutase (SODC)
SH05_RS12325	PF00248	Aldo/keto reductase family
SH05_RS12330	PF06945	SH05_RS12330
SH05_RS12335	PF00440	Bacterial regulatory proteins, tetR family
SH05_RS12335	PF16925	SH05_RS12335
SH05_RS12340	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
SH05_RS12345	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
SH05_RS12350	PF00929	Exonuclease
SH05_RS12355	PF00270	DEAD/DEAH box helicase
SH05_RS12355	PF00271	Helicase conserved C-terminal domain
SH05_RS12355	PF08494	SH05_RS12355
SH05_RS12360	PF00462	Glutaredoxin
SH05_RS12365	PF00877	NlpC/P60 family
SH05_RS12370	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
SH05_RS12370	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
SH05_RS12375	PF07690	Major Facilitator Superfamily
SH05_RS12385	PF00356	Bacterial regulatory proteins, lacI family
SH05_RS12385	PF13377	Periplasmic binding protein-like domain
SH05_RS12390	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS12390	PF03466	LysR substrate binding domain
SH05_RS12395	PF07690	Major Facilitator Superfamily
SH05_RS12400	PF02353	Mycolic acid cyclopropane synthetase
SH05_RS12405	PF00677	Lumazine binding domain
SH05_RS12410	PF01554	MatE
SH05_RS12415	PF03212	Pertactin
SH05_RS12415	PF16168	SH05_RS12415
SH05_RS12430	PF08803	Putative mono-oxygenase ydhR
SH05_RS12435	PF13454	FAD-NAD(P)-binding
SH05_RS12445	PF01292	Prokaryotic cytochrome b561
SH05_RS12450	PF13247	4Fe-4S dicluster domain
SH05_RS12460	PF01314	Aldehyde ferredoxin oxidoreductase, domains 2 & 3
SH05_RS12460	PF02730	Aldehyde ferredoxin oxidoreductase, N-terminal domain
SH05_RS12465	PF12800	4Fe-4S binding domain
SH05_RS12465	PF13247	4Fe-4S dicluster domain
SH05_RS12470	PF10965	SH05_RS12470
SH05_RS12475	PF00224	Pyruvate kinase, barrel domain
SH05_RS12475	PF02887	Pyruvate kinase, alpha/beta domain
SH05_RS12480	PF04728	Lipoprotein leucine-zipper
SH05_RS12485	PF01476	LysM domain
SH05_RS12485	PF03734	L,D-transpeptidase catalytic domain
SH05_RS12490	PF02657	Fe-S metabolism associated domain
SH05_RS12495	PF00266	Aminotransferase class-V
SH05_RS12500	PF01458	Uncharacterized protein family (UPF0051)
SH05_RS12505	PF00005	ABC transporter
SH05_RS12510	PF01458	Uncharacterized protein family (UPF0051)
SH05_RS12515	PF01521	Iron-sulphur cluster biosynthesis
SH05_RS12520	PF15930	SH05_RS12520
SH05_RS12525	PF03061	Thioesterase superfamily
SH05_RS12530	PF01565	FAD binding domain
SH05_RS12530	PF02913	FAD linked oxidases, C-terminal domain
SH05_RS12530	PF13183	4Fe-4S dicluster domain
SH05_RS12535	PF01594	SH05_RS12535
SH05_RS12540	PF08965	Domain of unknown function (DUF1870)
SH05_RS12545	PF07690	Major Facilitator Superfamily
SH05_RS12550	PF07690	Major Facilitator Superfamily
SH05_RS12555	PF08501	Shikimate dehydrogenase substrate binding domain
SH05_RS12560	PF01487	Type I 3-dehydroquinase
SH05_RS12565	PF01144	Coenzyme A transferase
SH05_RS12570	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
SH05_RS12570	PF02770	Acyl-CoA dehydrogenase, middle domain
SH05_RS12570	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
SH05_RS12575	PF02311	AraC-like ligand binding domain
SH05_RS12575	PF12833	Helix-turn-helix domain
SH05_RS12585	PF01012	Electron transfer flavoprotein domain
SH05_RS12590	PF00766	Electron transfer flavoprotein FAD-binding domain
SH05_RS12590	PF01012	Electron transfer flavoprotein domain
SH05_RS12595	PF01494	FAD binding domain
SH05_RS12605	PF00501	AMP-binding enzyme
SH05_RS12605	PF13193	AMP-binding enzyme C-terminal domain
SH05_RS12610	PF00391	PEP-utilising enzyme, mobile domain
SH05_RS12610	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
SH05_RS12610	PF02896	PEP-utilising enzyme, TIM barrel domain
SH05_RS12620	PF03618	SH05_RS12620
SH05_RS12625	PF00793	DAHP synthetase I family
SH05_RS12630	PF10636	Hemin uptake protein hemP
SH05_RS12635	PF02696	SH05_RS12635
SH05_RS12640	PF00563	EAL domain
SH05_RS12645	PF00877	NlpC/P60 family
SH05_RS12655	PF00255	Glutathione peroxidase
SH05_RS12660	PF01032	FecCD transport family
SH05_RS12665	PF00216	Bacterial DNA-binding protein
SH05_RS12670	PF01588	Putative tRNA binding domain
SH05_RS12670	PF03147	Ferredoxin-fold anticodon binding domain
SH05_RS12670	PF03483	B3/4 domain
SH05_RS12670	PF03484	tRNA synthetase B5 domain
SH05_RS12675	PF01409	tRNA synthetases class II core domain (F)
SH05_RS12675	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
SH05_RS12685	PF00453	Ribosomal protein L20
SH05_RS12690	PF01632	Ribosomal protein L35
SH05_RS12695	PF00707	Translation initiation factor IF-3, C-terminal domain
SH05_RS12695	PF05198	Translation initiation factor IF-3, N-terminal domain
SH05_RS12700	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
SH05_RS12700	PF02824	TGS domain
SH05_RS12700	PF03129	Anticodon binding domain
SH05_RS12700	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
SH05_RS12715	PF04338	Protein of unknown function, DUF481
SH05_RS12720	PF00294	pfkB family carbohydrate kinase
SH05_RS12725	PF11080	Protein of unknown function (DUF2622)
SH05_RS12730	PF03881	Fructosamine kinase
SH05_RS12735	PF14002	SH05_RS12735
SH05_RS12740	PF13419	Haloacid dehalogenase-like hydrolase
SH05_RS12745	PF04307	SH05_RS12745
SH05_RS12750	PF00375	Sodium:dicarboxylate symporter family
SH05_RS12760	PF10729	Cell division activator CedA
SH05_RS12765	PF00199	Catalase
SH05_RS12765	PF06628	Catalase-related immune-responsive
SH05_RS12770	PF04794	YdjC-like protein
SH05_RS12775	PF02056	Family 4 glycosyl hydrolase
SH05_RS12775	PF11975	Family 4 glycosyl hydrolase C-terminal domain
SH05_RS12780	PF07883	Cupin domain
SH05_RS12780	PF12833	Helix-turn-helix domain
SH05_RS12785	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
SH05_RS12790	PF02378	Phosphotransferase system, EIIC
SH05_RS12795	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
SH05_RS12800	PF04355	SmpA / OmlA family
SH05_RS12805	PF02540	NAD synthase
SH05_RS12810	PF12035	SH05_RS12810
SH05_RS12820	PF05962	HutD
SH05_RS12825	PF07813	LTXXQ motif family protein
SH05_RS12830	PF04952	Succinylglutamate desuccinylase / Aspartoacylase family
SH05_RS12835	PF04996	Succinylarginine dihydrolase
SH05_RS12840	PF00171	Aldehyde dehydrogenase family
SH05_RS12845	PF04958	Arginine N-succinyltransferase beta subunit
SH05_RS12850	PF00202	Aminotransferase class-III
SH05_RS12855	PF03372	Endonuclease/Exonuclease/phosphatase family
SH05_RS12860	PF09335	SH05_RS12860
SH05_RS12870	PF09335	SH05_RS12870
SH05_RS12875	PF02627	Carboxymuconolactone decarboxylase family
SH05_RS12880	PF13416	Bacterial extracellular solute-binding protein
SH05_RS12885	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS12890	PF00005	ABC transporter
SH05_RS12895	PF00581	Rhodanese-like domain
SH05_RS12900	PF01066	CDP-alcohol phosphatidyltransferase
SH05_RS12905	PF00293	NUDIX domain
SH05_RS12910	PF07383	SH05_RS12910
SH05_RS12915	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
SH05_RS12915	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
SH05_RS12920	PF06889	SH05_RS12920
SH05_RS12925	PF01131	DNA topoisomerase
SH05_RS12925	PF01751	Toprim domain
SH05_RS12930	PF00586	AIR synthase related protein, N-terminal domain
SH05_RS12930	PF02769	AIR synthase related protein, C-terminal domain
SH05_RS12940	PF00881	Nitroreductase family
SH05_RS12950	PF01343	Peptidase family S49
SH05_RS12955	PF00710	Asparaginase
SH05_RS12960	PF00857	Isochorismatase family
SH05_RS12965	PF00083	Sugar (and other) transporter
SH05_RS12970	PF00455	SH05_RS12970
SH05_RS12970	PF08220	DeoR-like helix-turn-helix domain
SH05_RS12975	PF00248	Aldo/keto reductase family
SH05_RS12980	PF00294	pfkB family carbohydrate kinase
SH05_RS12985	PF01116	Fructose-bisphosphate aldolase class-II
SH05_RS12990	PF00107	Zinc-binding dehydrogenase
SH05_RS12990	PF08240	Alcohol dehydrogenase GroES-like domain
SH05_RS12995	PF00083	Sugar (and other) transporter
SH05_RS13000	PF00107	Zinc-binding dehydrogenase
SH05_RS13000	PF08240	Alcohol dehydrogenase GroES-like domain
SH05_RS13005	PF07023	SH05_RS13005
SH05_RS13010	PF01641	SelR domain
SH05_RS13015	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SH05_RS13015	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
SH05_RS13020	PF01263	Aldose 1-epimerase
SH05_RS13025	PF00248	Aldo/keto reductase family
SH05_RS13030	PF06629	SH05_RS13030
SH05_RS13035	PF06798	SH05_RS13035
SH05_RS13035	PF08298	PrkA AAA domain
SH05_RS13040	PF04285	SH05_RS13040
SH05_RS13045	PF00990	GGDEF domain
SH05_RS13045	PF17158	SH05_RS13045
SH05_RS13050	PF00990	GGDEF domain
SH05_RS13050	PF17155	SH05_RS13050
SH05_RS13055	PF04073	Aminoacyl-tRNA editing domain
SH05_RS13065	PF04284	SH05_RS13065
SH05_RS13070	PF02311	AraC-like ligand binding domain
SH05_RS13070	PF12833	Helix-turn-helix domain
SH05_RS13075	PF07690	Major Facilitator Superfamily
SH05_RS13080	PF04343	SH05_RS13080
SH05_RS13085	PF03891	SH05_RS13085
SH05_RS13090	PF00990	GGDEF domain
SH05_RS13090	PF13185	GAF domain
SH05_RS13100	PF04226	SH05_RS13100
SH05_RS13105	PF08956	Domain of unknown function (DUF1869)
SH05_RS13110	PF09313	Domain of unknown function (DUF1971)
SH05_RS13115	PF01810	SH05_RS13115
SH05_RS13120	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS13120	PF03466	LysR substrate binding domain
SH05_RS13125	PF00180	Isocitrate/isopropylmalate dehydrogenase
SH05_RS13130	PF02028	BCCT family transporter
SH05_RS13135	PF00355	Rieske [2Fe-2S] domain
SH05_RS13135	PF00848	Ring hydroxylating alpha subunit (catalytic domain)
SH05_RS13140	PF00111	2Fe-2S iron-sulfur cluster binding domain
SH05_RS13140	PF00175	Oxidoreductase NAD-binding domain
SH05_RS13140	PF00970	Oxidoreductase FAD-binding domain
SH05_RS13145	PF00570	HRDC domain
SH05_RS13145	PF01612	3'-5' exonuclease
SH05_RS13150	PF00501	AMP-binding enzyme
SH05_RS13150	PF13193	AMP-binding enzyme C-terminal domain
SH05_RS13155	PF03843	SH05_RS13155
SH05_RS13160	PF00814	Glycoprotease family
SH05_RS13165	PF04851	Type III restriction enzyme, res subunit
SH05_RS13165	PF13307	Helicase C-terminal domain
SH05_RS13170	PF01042	Endoribonuclease L-PSP
SH05_RS13175	PF08986	Domain of unknown function (DUF1889)
SH05_RS13180	PF03701	SH05_RS13180
SH05_RS13185	PF00425	chorismate binding enzyme
SH05_RS13185	PF04715	Anthranilate synthase component I, N terminal region
SH05_RS13190	PF00293	NUDIX domain
SH05_RS13195	PF03313	SH05_RS13195
SH05_RS13195	PF03315	Serine dehydratase beta chain
SH05_RS13200	PF00563	EAL domain
SH05_RS13200	PF12792	SH05_RS13200
SH05_RS13205	PF03471	Transporter associated domain
SH05_RS13205	PF03741	SH05_RS13205
SH05_RS13215	PF03610	PTS system fructose IIA component
SH05_RS13215	PF03830	PTS system sorbose subfamily IIB component
SH05_RS13220	PF03609	SH05_RS13220
SH05_RS13225	PF03613	SH05_RS13225
SH05_RS13230	PF06173	SH05_RS13230
SH05_RS13240	PF02659	SH05_RS13240
SH05_RS13245	PF13847	Methyltransferase domain
SH05_RS13250	PF00313	'Cold-shock' DNA-binding domain
SH05_RS13255	PF10736	SH05_RS13255
SH05_RS13265	PF13974	SH05_RS13265
SH05_RS13270	PF13998	SH05_RS13270
SH05_RS13275	PF13996	SH05_RS13275
SH05_RS13280	PF01614	Bacterial transcriptional regulator
SH05_RS13280	PF09339	IclR helix-turn-helix domain
SH05_RS13285	PF07690	Major Facilitator Superfamily
SH05_RS13295	PF00595	PDZ domain (Also known as DHR or GLGF)
SH05_RS13295	PF03572	Peptidase family S41
SH05_RS13295	PF11818	SH05_RS13295
SH05_RS13300	PF04352	ProQ/FINO family
SH05_RS13305	PF13185	GAF domain
SH05_RS13310	PF04403	SH05_RS13310
SH05_RS13315	PF02470	SH05_RS13315
SH05_RS13325	PF07351	SH05_RS13325
SH05_RS13330	PF07358	SH05_RS13330
SH05_RS13335	PF00149	Calcineurin-like phosphoesterase
SH05_RS13345	PF10709	SH05_RS13345
SH05_RS13350	PF05425	SH05_RS13350
SH05_RS13355	PF04234	CopC domain
SH05_RS13360	PF06440	DNA polymerase III, theta subunit
SH05_RS13365	PF00795	Carbon-nitrogen hydrolase
SH05_RS13370	PF00929	Exonuclease
SH05_RS13375	PF00326	Prolyl oligopeptidase family
SH05_RS13375	PF02897	Prolyl oligopeptidase, N-terminal beta-propeller domain
SH05_RS13380	PF04391	SH05_RS13380
SH05_RS13390	PF13995	YebF-like protein
SH05_RS13395	PF07130	YebG protein
SH05_RS13400	PF02222	ATP-grasp domain
SH05_RS13405	PF01081	KDPG and KHG aldolase
SH05_RS13410	PF00920	Dehydratase family
SH05_RS13415	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
SH05_RS13415	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
SH05_RS13425	PF01380	SIS domain
SH05_RS13425	PF01418	Helix-turn-helix domain, rpiR family
SH05_RS13430	PF00224	Pyruvate kinase, barrel domain
SH05_RS13430	PF02887	Pyruvate kinase, alpha/beta domain
SH05_RS13435	PF03279	SH05_RS13435
SH05_RS13440	PF01476	LysM domain
SH05_RS13440	PF01551	Peptidase family M23
SH05_RS13440	PF08525	SH05_RS13440
SH05_RS13445	PF01297	Periplasmic solute binding protein family
SH05_RS13450	PF00005	ABC transporter
SH05_RS13455	PF00950	SH05_RS13455
SH05_RS13460	PF05491	Holliday junction DNA helicase ruvB C-terminus
SH05_RS13460	PF05496	Holliday junction DNA helicase ruvB N-terminus
SH05_RS13465	PF01330	RuvA N terminal domain
SH05_RS13465	PF07499	RuvA, C-terminal domain
SH05_RS13465	PF14520	Helix-hairpin-helix domain
SH05_RS13470	PF05708	Orthopoxvirus protein of unknown function (DUF830)
SH05_RS13475	PF02075	Crossover junction endodeoxyribonuclease RuvC
SH05_RS13480	PF01709	Transcriptional regulator
SH05_RS13485	PF00293	NUDIX domain
SH05_RS13490	PF00152	tRNA synthetases class II (D, K and N)
SH05_RS13490	PF01336	OB-fold nucleic acid binding domain
SH05_RS13490	PF02938	GAD domain
SH05_RS13495	PF00857	Isochorismatase family
SH05_RS13500	PF01904	Protein of unknown function DUF72
SH05_RS13505	PF01124	MAPEG family
SH05_RS13510	PF13649	Methyltransferase domain
SH05_RS13515	PF08003	Protein of unknown function (DUF1698)
SH05_RS13520	PF00384	Molybdopterin oxidoreductase
SH05_RS13520	PF01568	Molydopterin dinucleotide binding domain
SH05_RS13525	PF03264	NapC/NirT cytochrome c family, N-terminal region
SH05_RS13530	PF03932	CutC family
SH05_RS13535	PF06185	YecM protein
SH05_RS13540	PF00750	tRNA synthetases class I (R)
SH05_RS13540	PF03485	Arginyl tRNA synthetase N terminal domain
SH05_RS13540	PF05746	DALR anticodon binding domain
SH05_RS13545	PF07007	Protein of unknown function (DUF1311)
SH05_RS13550	PF06366	SH05_RS13550
SH05_RS13555	PF00771	FHIPEP family
SH05_RS13560	PF01312	FlhB HrpN YscU SpaS Family
SH05_RS13565	PF04344	Chemotaxis phosphatase, CheZ
SH05_RS13570	PF00072	Response regulator receiver domain
SH05_RS13575	PF00072	Response regulator receiver domain
SH05_RS13575	PF01339	CheB methylesterase
SH05_RS13580	PF01739	CheR methyltransferase, SAM binding domain
SH05_RS13580	PF03705	CheR methyltransferase, all-alpha domain
SH05_RS13585	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SH05_RS13585	PF00672	HAMP domain
SH05_RS13585	PF02203	Tar ligand binding domain homologue
SH05_RS13590	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SH05_RS13590	PF00672	HAMP domain
SH05_RS13590	PF02203	Tar ligand binding domain homologue
SH05_RS13595	PF01584	CheW-like domain
SH05_RS13600	PF01584	CheW-like domain
SH05_RS13600	PF01627	Hpt domain
SH05_RS13600	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH05_RS13600	PF02895	Signal transducing histidine kinase, homodimeric domain
SH05_RS13600	PF09078	CheY binding
SH05_RS13605	PF00691	OmpA family
SH05_RS13605	PF13677	SH05_RS13605
SH05_RS13610	PF01618	SH05_RS13610
SH05_RS13615	PF05280	Flagellar transcriptional activator (FlhC)
SH05_RS13620	PF05247	Flagellar transcriptional activator (FlhD)
SH05_RS13625	PF00582	Universal stress protein family
SH05_RS13630	PF00982	Glycosyltransferase family 20
SH05_RS13635	PF02358	Trehalose-phosphatase
SH05_RS13640	PF02653	SH05_RS13640
SH05_RS13645	PF00005	ABC transporter
SH05_RS13650	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
SH05_RS13655	PF00210	Ferritin-like domain
SH05_RS13660	PF10964	SH05_RS13660
SH05_RS13670	PF13992	SH05_RS13670
SH05_RS13675	PF00210	Ferritin-like domain
SH05_RS13680	PF10678	SH05_RS13680
SH05_RS13685	PF03222	Tryptophan/tyrosine permease family
SH05_RS13690	PF02810	SEC-C motif
SH05_RS13690	PF03695	Uncharacterised protein family (UPF0149)
SH05_RS13710	PF01066	CDP-alcohol phosphatidyltransferase
SH05_RS13715	PF01541	GIY-YIG catalytic domain
SH05_RS13715	PF02151	UvrB/uvrC motif
SH05_RS13715	PF08459	UvrC Helix-hairpin-helix N-terminal
SH05_RS13715	PF14520	Helix-hairpin-helix domain
SH05_RS13720	PF00072	Response regulator receiver domain
SH05_RS13720	PF00196	Bacterial regulatory proteins, luxR family
SH05_RS13730	PF10769	SH05_RS13730
SH05_RS13735	PF00196	Bacterial regulatory proteins, luxR family
SH05_RS13735	PF03472	Autoinducer binding domain
SH05_RS13740	PF00005	ABC transporter
SH05_RS13745	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS13750	PF00291	Pyridoxal-phosphate dependent enzyme
SH05_RS13755	PF00497	Bacterial extracellular solute-binding proteins, family 3
SH05_RS13760	PF02899	Phage integrase, N-terminal SAM-like domain
SH05_RS13765	PF04539	Sigma-70 region 3
SH05_RS13765	PF04542	Sigma-70 region 2
SH05_RS13765	PF04545	Sigma-70, region 4
SH05_RS13770	PF00669	Bacterial flagellin N-terminal helical region
SH05_RS13770	PF00700	Bacterial flagellin C-terminal helical region
SH05_RS13770	PF08884	Flagellin D3 domain
SH05_RS13775	PF02465	SH05_RS13775
SH05_RS13775	PF07195	SH05_RS13775
SH05_RS13780	PF02561	Flagellar protein FliS
SH05_RS13785	PF05400	Flagellar protein FliT
SH05_RS13790	PF00128	Alpha amylase, catalytic domain
SH05_RS13790	PF02806	Alpha amylase, C-terminal all-beta domain
SH05_RS13795	PF13987	YedD-like protein
SH05_RS13800	PF04143	SH05_RS13800
SH05_RS13805	PF01206	Sulfurtransferase TusA
SH05_RS13810	PF02586	Uncharacterised ACR, COG2135
SH05_RS13815	PF00583	Acetyltransferase (GNAT) family
SH05_RS13835	PF02049	SH05_RS13835
SH05_RS13840	PF01514	Secretory protein of YscJ/FliF family
SH05_RS13840	PF08345	SH05_RS13840
SH05_RS13845	PF01706	FliG C-terminal domain
SH05_RS13845	PF14841	FliG middle domain
SH05_RS13845	PF14842	FliG N-terminal domain
SH05_RS13850	PF02108	SH05_RS13850
SH05_RS13855	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
SH05_RS13860	PF02050	Flagellar FliJ protein
SH05_RS13865	PF02120	Flagellar hook-length control protein FliK
SH05_RS13870	PF03748	SH05_RS13870
SH05_RS13875	PF01052	Surface presentation of antigens (SPOA)
SH05_RS13875	PF02154	Flagellar motor switch protein FliM
SH05_RS13880	PF01052	Surface presentation of antigens (SPOA)
SH05_RS13880	PF16973	SH05_RS13880
SH05_RS13885	PF04347	SH05_RS13885
SH05_RS13890	PF00813	SH05_RS13890
SH05_RS13895	PF01313	SH05_RS13895
SH05_RS13900	PF01311	SH05_RS13900
SH05_RS13905	PF00196	Bacterial regulatory proteins, luxR family
SH05_RS13910	PF10781	SH05_RS13910
SH05_RS13915	PF10733	SH05_RS13915
SH05_RS13920	PF08282	haloacid dehalogenase-like hydrolase
SH05_RS13925	PF00990	GGDEF domain
SH05_RS13925	PF17151	SH05_RS13925
SH05_RS13930	PF09926	SH05_RS13930
SH05_RS13935	PF05661	SH05_RS13935
SH05_RS13940	PF00892	EamA-like transporter family
SH05_RS13945	PF03852	DNA mismatch endonuclease Vsr
SH05_RS13950	PF00145	C-5 cytosine-specific DNA methylase
SH05_RS13955	PF01966	HD domain
SH05_RS13985	PF00512	His Kinase A (phospho-acceptor) domain
SH05_RS13985	PF00672	HAMP domain
SH05_RS13985	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH05_RS13990	PF00072	Response regulator receiver domain
SH05_RS13990	PF00486	Transcriptional regulatory protein, C terminal
SH05_RS13995	PF00576	HIUase/Transthyretin family
SH05_RS14000	PF00174	Oxidoreductase molybdopterin binding domain
SH05_RS14005	PF01794	SH05_RS14005
SH05_RS14010	PF09223	YodA lipocalin-like domain
SH05_RS14015	PF01292	Prokaryotic cytochrome b561
SH05_RS14030	PF06167	Glucose-regulated metallo-peptidase M90
SH05_RS14040	PF02369	Bacterial Ig-like domain (group 1)
SH05_RS14040	PF09134	Invasin, domain 3
SH05_RS14040	PF11924	Protein of unknown function (DUF3442)
SH05_RS14050	PF00083	Sugar (and other) transporter
SH05_RS14050	PF07690	Major Facilitator Superfamily
SH05_RS14055	PF01048	Phosphorylase superfamily
SH05_RS14055	PF10423	Bacterial AMP nucleoside phosphorylase N-terminus
SH05_RS14060	PF01709	Transcriptional regulator
SH05_RS14070	PF01554	MatE
SH05_RS14080	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS14080	PF03466	LysR substrate binding domain
SH05_RS14085	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS14085	PF03466	LysR substrate binding domain
SH05_RS14095	PF03734	L,D-transpeptidase catalytic domain
SH05_RS14100	PF02277	Phosphoribosyltransferase
SH05_RS14105	PF02654	SH05_RS14105
SH05_RS14110	PF02283	Cobinamide kinase / cobinamide phosphate guanyltransferase
SH05_RS14120	PF01609	Transposase DDE domain
SH05_RS14120	PF05598	SH05_RS14120
SH05_RS14130	PF00665	Integrase core domain
SH05_RS14130	PF13276	SH05_RS14130
SH05_RS14135	PF01527	Transposase
SH05_RS14140	PF07715	TonB-dependent Receptor Plug Domain
SH05_RS14150	PF03797	Autotransporter beta-domain
SH05_RS14150	PF13018	SH05_RS14150
SH05_RS14150	PF16168	SH05_RS14150
SH05_RS14160	PF04002	RadC-like JAB domain
SH05_RS14165	PF06174	SH05_RS14165
SH05_RS14170	PF06154	YagB/YeeU/YfjZ family
SH05_RS14175	PF06755	SH05_RS14175
SH05_RS14185	PF06117	SH05_RS14185
SH05_RS14190	PF10662	Ethanolamine utilisation - propanediol utilisation
SH05_RS14195	PF04363	SH05_RS14195
SH05_RS14200	PF04632	SH05_RS14200
SH05_RS14205	PF06445	GyrI-like small molecule binding domain
SH05_RS14210	PF00768	D-alanyl-D-alanine carboxypeptidase
SH05_RS14210	PF07943	Penicillin-binding protein 5, C-terminal domain
SH05_RS14215	PF00929	Exonuclease
SH05_RS14215	PF08411	Exonuclease C-terminal
SH05_RS14220	PF01206	Sulfurtransferase TusA
SH05_RS14225	PF04143	SH05_RS14225
SH05_RS14230	PF13520	Amino acid permease
SH05_RS14235	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS14235	PF03466	LysR substrate binding domain
SH05_RS14240	PF01370	NAD dependent epimerase/dehydratase family
SH05_RS14245	PF06769	Plasmid encoded toxin Txe
SH05_RS14250	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
SH05_RS14255	PF01634	ATP phosphoribosyltransferase
SH05_RS14255	PF08029	HisG, C-terminal domain
SH05_RS14260	PF00815	Histidinol dehydrogenase
SH05_RS14265	PF00155	Aminotransferase class I and II
SH05_RS14270	PF00475	Imidazoleglycerol-phosphate dehydratase
SH05_RS14270	PF08645	Polynucleotide kinase 3 phosphatase
SH05_RS14275	PF00117	Glutamine amidotransferase class-I
SH05_RS14280	PF00977	Histidine biosynthesis protein
SH05_RS14285	PF00977	Histidine biosynthesis protein
SH05_RS14290	PF01502	Phosphoribosyl-AMP cyclohydrolase
SH05_RS14290	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
SH05_RS14295	PF02706	Chain length determinant protein
SH05_RS14300	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
SH05_RS14300	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
SH05_RS14300	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
SH05_RS14305	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
SH05_RS14305	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
SH05_RS14310	PF01609	Transposase DDE domain
SH05_RS14310	PF05598	SH05_RS14310
SH05_RS14315	PF00535	Glycosyl transferase family 2
SH05_RS14320	PF00534	Glycosyl transferases group 1
SH05_RS14325	PF00132	Bacterial transferase hexapeptide (six repeats)
SH05_RS14340	PF03275	UDP-galactopyranose mutase
SH05_RS14340	PF13450	NAD(P)-binding Rossmann-like domain
SH05_RS14345	PF01943	SH05_RS14345
SH05_RS14350	PF00908	dTDP-4-dehydrorhamnose 3,5-epimerase
SH05_RS14355	PF00483	Nucleotidyl transferase
SH05_RS14365	PF16363	SH05_RS14365
SH05_RS14370	PF00483	Nucleotidyl transferase
SH05_RS14380	PF00534	Glycosyl transferases group 1
SH05_RS14380	PF13439	Glycosyltransferase Family 4
SH05_RS14385	PF04230	SH05_RS14385
SH05_RS14390	PF13440	SH05_RS14390
SH05_RS14395	PF02397	SH05_RS14395
SH05_RS14395	PF13727	CoA-binding domain
SH05_RS14400	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
SH05_RS14400	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
SH05_RS14400	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
SH05_RS14400	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
SH05_RS14405	PF00483	Nucleotidyl transferase
SH05_RS14405	PF01050	Mannose-6-phosphate isomerase
SH05_RS14410	PF00534	Glycosyl transferases group 1
SH05_RS14410	PF13579	Glycosyl transferase 4-like domain
SH05_RS14415	PF00293	NUDIX domain
SH05_RS14420	PF01370	NAD dependent epimerase/dehydratase family
SH05_RS14425	PF16363	SH05_RS14425
SH05_RS14430	PF00132	Bacterial transferase hexapeptide (six repeats)
SH05_RS14435	PF00535	Glycosyl transferase family 2
SH05_RS14445	PF00534	Glycosyl transferases group 1
SH05_RS14445	PF13439	Glycosyltransferase Family 4
SH05_RS14450	PF00132	Bacterial transferase hexapeptide (six repeats)
SH05_RS14455	PF00535	Glycosyl transferase family 2
SH05_RS14460	PF02706	Chain length determinant protein
SH05_RS14460	PF13614	AAA domain
SH05_RS14460	PF13807	SH05_RS14460
SH05_RS14465	PF01451	Low molecular weight phosphotyrosine protein phosphatase
SH05_RS14470	PF02563	Polysaccharide biosynthesis/export protein
SH05_RS14470	PF10531	SLBB domain
SH05_RS14475	PF00571	CBS domain
SH05_RS14475	PF03471	Transporter associated domain
SH05_RS14475	PF03741	SH05_RS14475
SH05_RS14480	PF05170	SH05_RS14480
SH05_RS14485	PF00692	dUTPase
SH05_RS14490	PF00485	Phosphoribulokinase / Uridine kinase family
SH05_RS14495	PF00563	EAL domain
SH05_RS14495	PF00990	GGDEF domain
SH05_RS14495	PF05231	SH05_RS14495
SH05_RS14495	PF08447	PAS fold
SH05_RS14495	PF08448	PAS fold
SH05_RS14495	PF13426	PAS domain
SH05_RS14500	PF00730	HhH-GPD superfamily base excision DNA repair protein
SH05_RS14500	PF06029	AlkA N-terminal domain
SH05_RS14510	PF00012	Hsp70 protein
SH05_RS14520	PF10077	SH05_RS14520
SH05_RS14525	PF13672	Protein phosphatase 2C
SH05_RS14530	PF00092	von Willebrand factor type A domain
SH05_RS14535	PF13437	HlyD family secretion protein
SH05_RS14535	PF13533	Biotin-lipoyl like
SH05_RS14540	PF00873	AcrB/AcrD/AcrF family
SH05_RS14545	PF00873	AcrB/AcrD/AcrF family
SH05_RS14550	PF07690	Major Facilitator Superfamily
SH05_RS14555	PF00512	His Kinase A (phospho-acceptor) domain
SH05_RS14555	PF00672	HAMP domain
SH05_RS14555	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH05_RS14560	PF00072	Response regulator receiver domain
SH05_RS14560	PF00486	Transcriptional regulatory protein, C terminal
SH05_RS14565	PF07411	Domain of unknown function (DUF1508)
SH05_RS14570	PF01136	SH05_RS14570
SH05_RS14570	PF16325	SH05_RS14570
SH05_RS14590	PF00781	Diacylglycerol kinase catalytic domain
SH05_RS14595	PF00455	SH05_RS14595
SH05_RS14600	PF01527	Transposase
SH05_RS14605	PF00665	Integrase core domain
SH05_RS14605	PF13276	SH05_RS14605
SH05_RS14610	PF08220	DeoR-like helix-turn-helix domain
SH05_RS14615	PF00107	Zinc-binding dehydrogenase
SH05_RS14615	PF08240	Alcohol dehydrogenase GroES-like domain
SH05_RS14620	PF03611	SH05_RS14620
SH05_RS14625	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
SH05_RS14630	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
SH05_RS14635	PF08013	Tagatose 6 phosphate kinase
SH05_RS14640	PF01116	Fructose-bisphosphate aldolase class-II
SH05_RS14645	PF01791	DeoC/LacD family aldolase
SH05_RS14650	PF03825	SH05_RS14650
SH05_RS14655	PF03747	ADP-ribosylglycohydrolase
SH05_RS14660	PF00294	pfkB family carbohydrate kinase
SH05_RS14665	PF00392	Bacterial regulatory proteins, gntR family
SH05_RS14665	PF07702	UTRA domain
SH05_RS14670	PF01183	Glycosyl hydrolases family 25
SH05_RS14675	PF08543	Phosphomethylpyrimidine kinase
SH05_RS14680	PF02110	Hydroxyethylthiazole kinase family
SH05_RS14685	PF02583	Metal-sensitive transcriptional repressor
SH05_RS14690	PF03824	SH05_RS14690
SH05_RS14695	PF11776	Domain of unknown function (DUF3315)
SH05_RS14700	PF00419	Fimbrial protein
SH05_RS14705	PF00577	Outer membrane usher protein
SH05_RS14705	PF13953	PapC C-terminal domain
SH05_RS14705	PF13954	PapC N-terminal domain
SH05_RS14710	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
SH05_RS14710	PF02753	Pili assembly chaperone PapD, C-terminal domain
SH05_RS14715	PF00419	Fimbrial protein
SH05_RS14725	PF10836	SH05_RS14725
SH05_RS14730	PF10609	ParA/MinD ATPase like
SH05_RS14735	PF01588	Putative tRNA binding domain
SH05_RS14735	PF09334	tRNA synthetases class I (M)
SH05_RS14740	PF05406	WGR domain
SH05_RS14750	PF13569	SH05_RS14750
SH05_RS14760	PF07728	AAA domain (dynein-related subfamily)
SH05_RS14770	PF05762	VWA domain containing CoxE-like protein
SH05_RS14775	PF04434	SH05_RS14775
SH05_RS14780	PF06998	Protein of unknown function (DUF1307)
SH05_RS14785	PF07308	SH05_RS14785
SH05_RS14790	PF00072	Response regulator receiver domain
SH05_RS14790	PF04397	LytTr DNA-binding domain
SH05_RS14795	PF06580	SH05_RS14795
SH05_RS14795	PF07694	5TMR of 5TMR-LYT
SH05_RS14795	PF13492	GAF domain
SH05_RS14800	PF13411	MerR HTH family regulatory protein
SH05_RS14810	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS14815	PF00005	ABC transporter
SH05_RS14820	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS14825	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
SH05_RS14830	PF00933	Glycosyl hydrolase family 3 N terminal domain
SH05_RS14830	PF01915	Glycosyl hydrolase family 3 C-terminal domain
SH05_RS14830	PF14310	Fibronectin type III-like domain
SH05_RS14835	PF01565	FAD binding domain
SH05_RS14835	PF09330	D-lactate dehydrogenase, membrane binding
SH05_RS14840	PF00768	D-alanyl-D-alanine carboxypeptidase
SH05_RS14845	PF06930	SH05_RS14845
SH05_RS14850	PF09335	SH05_RS14850
SH05_RS14855	PF13561	Enoyl-(Acyl carrier protein) reductase
SH05_RS14870	PF01207	Dihydrouridine synthase (Dus)
SH05_RS14875	PF03788	SH05_RS14875
SH05_RS14880	PF04172	SH05_RS14880
SH05_RS14885	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
SH05_RS14885	PF08211	Cytidine and deoxycytidylate deaminase zinc-binding region
SH05_RS14890	PF02698	DUF218 domain
SH05_RS14895	PF10808	SH05_RS14895
SH05_RS14900	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SH05_RS14900	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
SH05_RS14905	PF01180	Dihydroorotate dehydrogenase
SH05_RS14905	PF14697	4Fe-4S dicluster domain
SH05_RS14910	PF02653	SH05_RS14910
SH05_RS14915	PF03400	SH05_RS14915
SH05_RS14925	PF13407	Periplasmic binding protein domain
SH05_RS14930	PF00356	Bacterial regulatory proteins, lacI family
SH05_RS14930	PF13377	Periplasmic binding protein-like domain
SH05_RS14940	PF04235	SH05_RS14940
SH05_RS14945	PF01227	GTP cyclohydrolase I
SH05_RS14955	PF00756	Putative esterase
SH05_RS14960	PF00593	TonB dependent receptor
SH05_RS14960	PF07715	TonB-dependent Receptor Plug Domain
SH05_RS14965	PF00324	Amino acid permease
SH05_RS14970	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS14970	PF03466	LysR substrate binding domain
SH05_RS14975	PF03601	SH05_RS14975
SH05_RS14980	PF01261	Xylose isomerase-like TIM barrel
SH05_RS14985	PF00294	pfkB family carbohydrate kinase
SH05_RS14985	PF13412	Winged helix-turn-helix DNA-binding
SH05_RS14990	PF01773	Na+ dependent nucleoside transporter N-terminus
SH05_RS14990	PF07662	Na+ dependent nucleoside transporter C-terminus
SH05_RS14995	PF01156	Inosine-uridine preferring nucleoside hydrolase
SH05_RS15000	PF00027	Cyclic nucleotide-binding domain
SH05_RS15005	PF01773	Na+ dependent nucleoside transporter N-terminus
SH05_RS15005	PF07662	Na+ dependent nucleoside transporter C-terminus
SH05_RS15010	PF04227	Indigoidine synthase A like protein
SH05_RS15015	PF00294	pfkB family carbohydrate kinase
SH05_RS15020	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
SH05_RS15020	PF02378	Phosphotransferase system, EIIC
SH05_RS15025	PF00294	pfkB family carbohydrate kinase
SH05_RS15030	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
SH05_RS15030	PF00381	PTS HPr component phosphorylation site
SH05_RS15035	PF07690	Major Facilitator Superfamily
SH05_RS15040	PF03692	SH05_RS15040
SH05_RS15045	PF01132	Elongation factor P (EF-P) OB domain
SH05_RS15045	PF08207	Elongation factor P (EF-P) KOW-like domain
SH05_RS15045	PF09285	Elongation factor P, C-terminal
SH05_RS15050	PF01232	Mannitol dehydrogenase Rossmann domain
SH05_RS15050	PF08125	Mannitol dehydrogenase C-terminal domain
SH05_RS15055	PF02492	CobW/HypB/UreG, nucleotide-binding domain
SH05_RS15055	PF07683	Cobalamin synthesis protein cobW C-terminal domain
SH05_RS15060	PF01569	PAP2 superfamily
SH05_RS15065	PF00877	NlpC/P60 family
SH05_RS15070	PF00563	EAL domain
SH05_RS15070	PF12792	SH05_RS15070
SH05_RS15075	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
SH05_RS15080	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS15085	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS15085	PF12911	SH05_RS15085
SH05_RS15090	PF00005	ABC transporter
SH05_RS15090	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
SH05_RS15095	PF13989	SH05_RS15095
SH05_RS15100	PF07690	Major Facilitator Superfamily
SH05_RS15105	PF00849	RNA pseudouridylate synthase
SH05_RS15105	PF01479	S4 domain
SH05_RS15110	PF00271	Helicase conserved C-terminal domain
SH05_RS15110	PF04851	Type III restriction enzyme, res subunit
SH05_RS15115	PF01386	Ribosomal L25p family
SH05_RS15120	PF04245	SH05_RS15120
SH05_RS15125	PF07208	Protein of unknown function (DUF1414)
SH05_RS15130	PF00884	Sulfatase
SH05_RS15130	PF11893	SH05_RS15130
SH05_RS15140	PF03212	Pertactin
SH05_RS15140	PF03797	Autotransporter beta-domain
SH05_RS15140	PF16168	SH05_RS15140
SH05_RS15145	PF01609	Transposase DDE domain
SH05_RS15145	PF05598	SH05_RS15145
SH05_RS15155	PF00072	Response regulator receiver domain
SH05_RS15155	PF00196	Bacterial regulatory proteins, luxR family
SH05_RS15160	PF03918	Cytochrome C biogenesis protein
SH05_RS15165	PF08534	Redoxin
SH05_RS15170	PF01578	SH05_RS15170
SH05_RS15170	PF16327	SH05_RS15170
SH05_RS15175	PF03100	CcmE
SH05_RS15180	PF04995	SH05_RS15180
SH05_RS15185	PF01578	SH05_RS15185
SH05_RS15190	PF03379	SH05_RS15190
SH05_RS15195	PF00005	ABC transporter
SH05_RS15200	PF03264	NapC/NirT cytochrome c family, N-terminal region
SH05_RS15205	PF03892	Nitrate reductase cytochrome c-type subunit (NapB)
SH05_RS15210	PF12801	SH05_RS15210
SH05_RS15210	PF13237	4Fe-4S dicluster domain
SH05_RS15215	PF12800	4Fe-4S binding domain
SH05_RS15215	PF12838	4Fe-4S dicluster domain
SH05_RS15220	PF00384	Molybdopterin oxidoreductase
SH05_RS15220	PF01568	Molydopterin dinucleotide binding domain
SH05_RS15220	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
SH05_RS15225	PF03927	NapD protein
SH05_RS15230	PF00037	4Fe-4S binding domain
SH05_RS15230	PF12800	4Fe-4S binding domain
SH05_RS15230	PF13187	4Fe-4S dicluster domain
SH05_RS15240	PF03974	Ecotin
SH05_RS15245	PF06039	SH05_RS15245
SH05_RS15250	PF00005	ABC transporter
SH05_RS15250	PF00664	ABC transporter transmembrane region
SH05_RS15255	PF13532	2OG-Fe(II) oxygenase superfamily
SH05_RS15260	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
SH05_RS15260	PF02805	Metal binding domain of Ada
SH05_RS15260	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
SH05_RS15260	PF12833	Helix-turn-helix domain
SH05_RS15265	PF02424	ApbE family
SH05_RS15270	PF00267	Gram-negative porin
SH05_RS15285	PF01627	Hpt domain
SH05_RS15285	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH05_RS15285	PF16359	SH05_RS15285
SH05_RS15290	PF00072	Response regulator receiver domain
SH05_RS15290	PF00196	Bacterial regulatory proteins, luxR family
SH05_RS15295	PF00072	Response regulator receiver domain
SH05_RS15295	PF00512	His Kinase A (phospho-acceptor) domain
SH05_RS15295	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH05_RS15295	PF09456	RcsC Alpha-Beta-Loop (ABL)
SH05_RS15300	PF00512	His Kinase A (phospho-acceptor) domain
SH05_RS15300	PF00672	HAMP domain
SH05_RS15300	PF00989	PAS fold
SH05_RS15300	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH05_RS15305	PF00072	Response regulator receiver domain
SH05_RS15305	PF00158	Sigma-54 interaction domain
SH05_RS15305	PF02954	Bacterial regulatory protein, Fis family
SH05_RS15310	PF01144	Coenzyme A transferase
SH05_RS15315	PF01144	Coenzyme A transferase
SH05_RS15320	PF02667	SH05_RS15320
SH05_RS15325	PF00108	Thiolase, N-terminal domain
SH05_RS15325	PF02803	Thiolase, C-terminal domain
SH05_RS15330	PF09906	SH05_RS15330
SH05_RS15335	PF08486	SH05_RS15335
SH05_RS15335	PF10062	SH05_RS15335
SH05_RS15345	PF00207	Alpha-2-macroglobulin family
SH05_RS15345	PF01835	MG2 domain
SH05_RS15345	PF07703	Alpha-2-macroglobulin family N-terminal region
SH05_RS15350	PF06672	SH05_RS15350
SH05_RS15355	PF09909	SH05_RS15355
SH05_RS15360	PF00521	DNA gyrase/topoisomerase IV, subunit A
SH05_RS15360	PF03989	DNA gyrase C-terminal domain, beta-propeller
SH05_RS15365	PF13489	Methyltransferase domain
SH05_RS15370	PF02415	SH05_RS15370
SH05_RS15370	PF03797	Autotransporter beta-domain
SH05_RS15370	PF12951	SH05_RS15370
SH05_RS15380	PF00317	Ribonucleotide reductase, all-alpha domain
SH05_RS15380	PF02867	Ribonucleotide reductase, barrel domain
SH05_RS15380	PF03477	ATP cone domain
SH05_RS15385	PF00268	Ribonucleotide reductase, small chain
SH05_RS15390	PF00111	2Fe-2S iron-sulfur cluster binding domain
SH05_RS15395	PF06293	Lipopolysaccharide kinase (Kdo/WaaP) family
SH05_RS15405	PF03009	Glycerophosphoryl diester phosphodiesterase family
SH05_RS15410	PF07690	Major Facilitator Superfamily
SH05_RS15415	PF01266	FAD dependent oxidoreductase
SH05_RS15415	PF04324	BFD-like [2Fe-2S] binding domain
SH05_RS15420	PF00890	FAD binding domain
SH05_RS15425	PF02754	SH05_RS15425
SH05_RS15425	PF13183	4Fe-4S dicluster domain
SH05_RS15430	PF04754	SH05_RS15430
SH05_RS15440	PF03328	HpcH/HpaI aldolase/citrate lyase family
SH05_RS15445	PF07690	Major Facilitator Superfamily
SH05_RS15455	PF01614	Bacterial transcriptional regulator
SH05_RS15455	PF09339	IclR helix-turn-helix domain
SH05_RS15460	PF00994	Probable molybdopterin binding domain
SH05_RS15465	PF07437	SH05_RS15465
SH05_RS15470	PF00293	NUDIX domain
SH05_RS15475	PF00300	Histidine phosphatase superfamily (branch 1)
SH05_RS15480	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
SH05_RS15485	PF00535	Glycosyl transferase family 2
SH05_RS15490	PF00551	Formyl transferase
SH05_RS15490	PF01370	NAD dependent epimerase/dehydratase family
SH05_RS15490	PF02911	Formyl transferase, C-terminal domain
SH05_RS15495	PF01522	Polysaccharide deacetylase
SH05_RS15500	PF02366	SH05_RS15500
SH05_RS15505	PF00892	EamA-like transporter family
SH05_RS15515	PF11183	Polymyxin resistance protein PmrD
SH05_RS15520	PF00501	AMP-binding enzyme
SH05_RS15520	PF13193	AMP-binding enzyme C-terminal domain
SH05_RS15525	PF13378	Enolase C-terminal domain-like
SH05_RS15530	PF00378	Enoyl-CoA hydratase/isomerase family
SH05_RS15535	PF12697	Alpha/beta hydrolase family
SH05_RS15540	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
SH05_RS15540	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
SH05_RS15540	PF16582	SH05_RS15540
SH05_RS15545	PF00425	chorismate binding enzyme
SH05_RS15550	PF05957	SH05_RS15550
SH05_RS15555	PF13673	Acetyltransferase (GNAT) domain
SH05_RS15560	PF12706	Beta-lactamase superfamily domain
SH05_RS15565	PF02902	Ulp1 protease family, C-terminal catalytic domain
SH05_RS15570	PF00092	von Willebrand factor type A domain
SH05_RS15570	PF12034	SH05_RS15570
SH05_RS15570	PF12450	SH05_RS15570
SH05_RS15575	PF04389	Peptidase family M28
SH05_RS15580	PF08974	Domain of unknown function (DUF1877)
SH05_RS15600	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
SH05_RS15605	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
SH05_RS15610	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
SH05_RS15610	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
SH05_RS15615	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
SH05_RS15620	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
SH05_RS15625	PF12838	4Fe-4S dicluster domain
SH05_RS15630	PF00146	NADH dehydrogenase
SH05_RS15635	PF00384	Molybdopterin oxidoreductase
SH05_RS15635	PF01568	Molydopterin dinucleotide binding domain
SH05_RS15635	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
SH05_RS15635	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
SH05_RS15635	PF13510	2Fe-2S iron-sulfur cluster binding domain
SH05_RS15640	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
SH05_RS15640	PF10531	SLBB domain
SH05_RS15640	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
SH05_RS15645	PF01257	Thioredoxin-like [2Fe-2S] ferredoxin
SH05_RS15650	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
SH05_RS15650	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
SH05_RS15655	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
SH05_RS15660	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
SH05_RS15665	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS15665	PF03466	LysR substrate binding domain
SH05_RS15670	PF00155	Aminotransferase class I and II
SH05_RS15675	PF13023	HD domain
SH05_RS15680	PF02080	TrkA-C domain
SH05_RS15680	PF03600	Citrate transporter
SH05_RS15685	PF13419	Haloacid dehalogenase-like hydrolase
SH05_RS15690	PF03887	YfbU domain
SH05_RS15695	PF04217	SH05_RS15695
SH05_RS15705	PF00871	Acetokinase family
SH05_RS15710	PF01515	Phosphate acetyl/butaryl transferase
SH05_RS15710	PF07085	DRTGG domain
SH05_RS15710	PF13500	AAA domain
SH05_RS15715	PF03606	SH05_RS15715
SH05_RS15720	PF00293	NUDIX domain
SH05_RS15725	PF12850	Calcineurin-like phosphoesterase superfamily domain
SH05_RS15730	PF13417	Glutathione S-transferase, N-terminal domain
SH05_RS15730	PF14834	Glutathione S-transferase, C-terminal domain
SH05_RS15735	PF00043	Glutathione S-transferase, C-terminal domain
SH05_RS15735	PF02798	Glutathione S-transferase, N-terminal domain
SH05_RS15740	PF02152	Dihydroneopterin aldolase
SH05_RS15745	PF01370	NAD dependent epimerase/dehydratase family
SH05_RS15745	PF08338	Domain of unknown function (DUF1731)
SH05_RS15750	PF04754	SH05_RS15750
SH05_RS15755	PF00005	ABC transporter
SH05_RS15760	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS15765	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS15770	PF00497	Bacterial extracellular solute-binding proteins, family 3
SH05_RS15775	PF00497	Bacterial extracellular solute-binding proteins, family 3
SH05_RS15780	PF02441	Flavoprotein
SH05_RS15785	PF00156	Phosphoribosyl transferase domain
SH05_RS15785	PF13522	Glutamine amidotransferase domain
SH05_RS15790	PF02674	SH05_RS15790
SH05_RS15795	PF05036	Sporulation related domain
SH05_RS15800	PF02875	Mur ligase family, glutamate ligase domain
SH05_RS15800	PF08245	Mur ligase middle domain
SH05_RS15805	PF01039	Carboxyl transferase domain
SH05_RS15810	PF09335	SH05_RS15810
SH05_RS15815	PF01416	tRNA pseudouridine synthase
SH05_RS15820	PF01118	Semialdehyde dehydrogenase, NAD binding domain
SH05_RS15820	PF02774	Semialdehyde dehydrogenase, dimerisation domain
SH05_RS15825	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
SH05_RS15825	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
SH05_RS15825	PF11890	Domain of unknown function (DUF3410)
SH05_RS15835	PF07690	Major Facilitator Superfamily
SH05_RS15840	PF00109	Beta-ketoacyl synthase, N-terminal domain
SH05_RS15840	PF02801	Beta-ketoacyl synthase, C-terminal domain
SH05_RS15845	PF01266	FAD dependent oxidoreductase
SH05_RS15845	PF05430	S-adenosyl-L-methionine-dependent methyltransferase
SH05_RS15850	PF08891	SH05_RS15850
SH05_RS15855	PF04315	SH05_RS15855
SH05_RS15860	PF01925	SH05_RS15860
SH05_RS15865	PF03411	Penicillin-insensitive murein endopeptidase
SH05_RS15870	PF01264	Chorismate synthase
SH05_RS15875	PF05175	Methyltransferase small domain
SH05_RS15880	PF01713	Smr domain
SH05_RS15885	PF11245	SH05_RS15885
SH05_RS15890	PF00419	Fimbrial protein
SH05_RS15895	PF00419	Fimbrial protein
SH05_RS15900	PF00419	Fimbrial protein
SH05_RS15905	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
SH05_RS15905	PF02753	Pili assembly chaperone PapD, C-terminal domain
SH05_RS15915	PF00419	Fimbrial protein
SH05_RS15920	PF00300	Histidine phosphatase superfamily (branch 1)
SH05_RS15925	PF00378	Enoyl-CoA hydratase/isomerase family
SH05_RS15925	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
SH05_RS15925	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
SH05_RS15930	PF00108	Thiolase, N-terminal domain
SH05_RS15930	PF02803	Thiolase, C-terminal domain
SH05_RS15935	PF04175	Protein of unknown function (DUF406)
SH05_RS15940	PF03349	Outer membrane protein transport protein (OMPP1/FadL/TodX)
SH05_RS15950	PF04333	SH05_RS15950
SH05_RS15955	PF01226	Formate/nitrite transporter
SH05_RS15965	PF00589	Phage integrase family
SH05_RS15965	PF13356	Domain of unknown function (DUF4102)
SH05_RS15970	PF04138	SH05_RS15970
SH05_RS15975	PF00535	Glycosyl transferase family 2
SH05_RS15985	PF02413	SH05_RS15985
SH05_RS15990	PF02413	SH05_RS15990
SH05_RS16000	PF05869	SH05_RS16000
SH05_RS16005	PF06069	SH05_RS16005
SH05_RS16025	PF10065	SH05_RS16025
SH05_RS16050	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS16050	PF03466	LysR substrate binding domain
SH05_RS16055	PF02447	SH05_RS16055
SH05_RS16060	PF00291	Pyridoxal-phosphate dependent enzyme
SH05_RS16065	PF07690	Major Facilitator Superfamily
SH05_RS16070	PF00529	HlyD family secretion protein
SH05_RS16070	PF16576	SH05_RS16070
SH05_RS16075	PF00072	Response regulator receiver domain
SH05_RS16075	PF00196	Bacterial regulatory proteins, luxR family
SH05_RS16080	PF00072	Response regulator receiver domain
SH05_RS16080	PF00497	Bacterial extracellular solute-binding proteins, family 3
SH05_RS16080	PF00512	His Kinase A (phospho-acceptor) domain
SH05_RS16080	PF01627	Hpt domain
SH05_RS16080	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH05_RS16085	PF02515	CoA-transferase family III
SH05_RS16090	PF03547	SH05_RS16090
SH05_RS16095	PF00205	Thiamine pyrophosphate enzyme, central domain
SH05_RS16095	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
SH05_RS16095	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
SH05_RS16100	PF02515	CoA-transferase family III
SH05_RS16105	PF10938	YfdX protein
SH05_RS16120	PF10810	SH05_RS16120
SH05_RS16125	PF03279	SH05_RS16125
SH05_RS16130	PF00155	Aminotransferase class I and II
SH05_RS16135	PF01590	GAF domain
SH05_RS16135	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH05_RS16135	PF06580	SH05_RS16135
SH05_RS16135	PF07694	5TMR of 5TMR-LYT
SH05_RS16140	PF00072	Response regulator receiver domain
SH05_RS16140	PF04397	LytTr DNA-binding domain
SH05_RS16145	PF12833	Helix-turn-helix domain
SH05_RS16150	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
SH05_RS16150	PF00381	PTS HPr component phosphorylation site
SH05_RS16150	PF00391	PEP-utilising enzyme, mobile domain
SH05_RS16150	PF02896	PEP-utilising enzyme, TIM barrel domain
SH05_RS16150	PF05524	PEP-utilising enzyme, N-terminal
SH05_RS16155	PF05343	M42 glutamyl aminopeptidase
SH05_RS16160	PF00557	Metallopeptidase family M24
SH05_RS16160	PF01321	Creatinase/Prolidase N-terminal domain
SH05_RS16165	PF02378	Phosphotransferase system, EIIC
SH05_RS16170	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
SH05_RS16175	PF02685	Glucokinase
SH05_RS16180	PF00654	Voltage gated chloride channel
SH05_RS16185	PF10697	SH05_RS16185
SH05_RS16195	PF01566	SH05_RS16195
SH05_RS16200	PF01773	Na+ dependent nucleoside transporter N-terminus
SH05_RS16200	PF07662	Na+ dependent nucleoside transporter C-terminus
SH05_RS16200	PF07670	Nucleoside recognition
SH05_RS16205	PF01609	Transposase DDE domain
SH05_RS16210	PF00563	EAL domain
SH05_RS16210	PF05231	SH05_RS16210
SH05_RS16225	PF07037	SH05_RS16225
SH05_RS16230	PF07037	SH05_RS16230
SH05_RS16235	PF00749	tRNA synthetases class I (E and Q), catalytic domain
SH05_RS16260	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS16260	PF03466	LysR substrate binding domain
SH05_RS16270	PF03825	SH05_RS16270
SH05_RS16275	PF01048	Phosphorylase superfamily
SH05_RS16280	PF03502	Nucleoside-specific channel-forming protein, Tsx
SH05_RS16285	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS16285	PF03466	LysR substrate binding domain
SH05_RS16290	PF13593	SBF-like CPA transporter family (DUF4137)
SH05_RS16295	PF12843	SH05_RS16295
SH05_RS16300	PF00533	BRCA1 C Terminus (BRCT) domain
SH05_RS16300	PF01653	NAD-dependent DNA ligase adenylation domain
SH05_RS16300	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
SH05_RS16300	PF03120	NAD-dependent DNA ligase OB-fold domain
SH05_RS16300	PF12826	Helix-hairpin-helix motif
SH05_RS16300	PF14520	Helix-hairpin-helix domain
SH05_RS16305	PF04354	ZipA, C-terminal FtsZ-binding domain
SH05_RS16310	PF07264	Etoposide-induced protein 2
SH05_RS16315	PF00291	Pyridoxal-phosphate dependent enzyme
SH05_RS16320	PF00381	PTS HPr component phosphorylation site
SH05_RS16325	PF00391	PEP-utilising enzyme, mobile domain
SH05_RS16325	PF02896	PEP-utilising enzyme, TIM barrel domain
SH05_RS16325	PF05524	PEP-utilising enzyme, N-terminal
SH05_RS16330	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
SH05_RS16335	PF08543	Phosphomethylpyrimidine kinase
SH05_RS16345	PF05406	WGR domain
SH05_RS16350	PF00291	Pyridoxal-phosphate dependent enzyme
SH05_RS16355	PF00005	ABC transporter
SH05_RS16355	PF12857	SH05_RS16355
SH05_RS16360	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS16365	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS16370	PF13531	Bacterial extracellular solute-binding protein
SH05_RS16375	PF13561	Enoyl-(Acyl carrier protein) reductase
SH05_RS16380	PF01380	SIS domain
SH05_RS16380	PF01418	Helix-turn-helix domain, rpiR family
SH05_RS16385	PF01380	SIS domain
SH05_RS16390	PF00367	phosphotransferase system, EIIB
SH05_RS16390	PF02378	Phosphotransferase system, EIIC
SH05_RS16395	PF00144	Beta-lactamase
SH05_RS16400	PF04261	Dyp-type peroxidase family
SH05_RS16405	PF06572	Protein of unknown function (DUF1131)
SH05_RS16410	PF11143	SH05_RS16410
SH05_RS16415	PF00583	Acetyltransferase (GNAT) family
SH05_RS16420	PF01520	N-acetylmuramoyl-L-alanine amidase
SH05_RS16425	PF01218	Coproporphyrinogen III oxidase
SH05_RS16430	PF12833	Helix-turn-helix domain
SH05_RS16435	PF00936	BMC domain
SH05_RS16435	PF16365	SH05_RS16435
SH05_RS16440	PF00936	BMC domain
SH05_RS16445	PF05985	Ethanolamine ammonia-lyase light chain (EutC)
SH05_RS16450	PF06751	Ethanolamine ammonia lyase large subunit (EutB)
SH05_RS16455	PF06277	Ethanolamine utilisation protein EutA
SH05_RS16460	PF04346	SH05_RS16460
SH05_RS16465	PF00465	Iron-containing alcohol dehydrogenase
SH05_RS16470	PF14450	Cell division protein FtsA
SH05_RS16475	PF00171	Aldehyde dehydrogenase family
SH05_RS16480	PF03319	Ethanolamine utilisation protein EutN/carboxysome
SH05_RS16485	PF00936	BMC domain
SH05_RS16490	PF01515	Phosphate acetyl/butaryl transferase
SH05_RS16495	PF01923	Cobalamin adenosyltransferase
SH05_RS16500	PF06249	Ethanolamine utilisation protein EutQ
SH05_RS16505	PF10662	Ethanolamine utilisation - propanediol utilisation
SH05_RS16510	PF00936	BMC domain
SH05_RS16515	PF00390	Malic enzyme, N-terminal domain
SH05_RS16515	PF01515	Phosphate acetyl/butaryl transferase
SH05_RS16515	PF03949	Malic enzyme, NAD binding domain
SH05_RS16520	PF00923	Transaldolase
SH05_RS16525	PF00456	Transketolase, thiamine diphosphate binding domain
SH05_RS16525	PF02779	Transketolase, pyrimidine binding domain
SH05_RS16525	PF02780	Transketolase, C-terminal domain
SH05_RS16530	PF06674	SH05_RS16530
SH05_RS16535	PF00293	NUDIX domain
SH05_RS16540	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SH05_RS16540	PF13247	4Fe-4S dicluster domain
SH05_RS16540	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
SH05_RS16545	PF00672	HAMP domain
SH05_RS16545	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH05_RS16545	PF07730	Histidine kinase
SH05_RS16545	PF13675	Type IV pili methyl-accepting chemotaxis transducer N-term
SH05_RS16550	PF00873	AcrB/AcrD/AcrF family
SH05_RS16560	PF03960	ArsC family
SH05_RS16565	PF01546	Peptidase family M20/M25/M40
SH05_RS16565	PF07687	Peptidase dimerisation domain
SH05_RS16570	PF13980	SH05_RS16570
SH05_RS16575	PF02230	Phospholipase/Carboxylesterase
SH05_RS16580	PF05127	Helicase
SH05_RS16580	PF08351	Domain of unknown function (DUF1726)
SH05_RS16580	PF13718	GNAT acetyltransferase 2
SH05_RS16580	PF17176	SH05_RS16580
SH05_RS16585	PF04228	SH05_RS16585
SH05_RS16590	PF01259	SAICAR synthetase
SH05_RS16600	PF06804	NlpB/DapX lipoprotein
SH05_RS16605	PF00701	Dihydrodipicolinate synthetase family
SH05_RS16610	PF01842	ACT domain
SH05_RS16610	PF13740	ACT domain
SH05_RS16615	PF00578	AhpC/TSA family
SH05_RS16620	PF00037	4Fe-4S binding domain
SH05_RS16620	PF12798	4Fe-4S binding domain
SH05_RS16625	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
SH05_RS16630	PF00146	NADH dehydrogenase
SH05_RS16635	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
SH05_RS16635	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
SH05_RS16640	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
SH05_RS16645	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
SH05_RS16645	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
SH05_RS16650	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
SH05_RS16650	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
SH05_RS16650	PF00374	Nickel-dependent hydrogenase
SH05_RS16655	PF12838	4Fe-4S dicluster domain
SH05_RS16660	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
SH05_RS16665	PF07450	SH05_RS16665
SH05_RS16670	PF00158	Sigma-54 interaction domain
SH05_RS16670	PF02954	Bacterial regulatory protein, Fis family
SH05_RS16670	PF13185	GAF domain
SH05_RS16675	PF01226	Formate/nitrite transporter
SH05_RS16680	PF01594	SH05_RS16680
SH05_RS16685	PF01435	Peptidase family M48
SH05_RS16685	PF14559	Tetratricopeptide repeat
SH05_RS16690	PF03960	ArsC family
SH05_RS16695	PF00308	Bacterial dnaA  protein
SH05_RS16700	PF00860	Permease family
SH05_RS16705	PF14681	Uracil phosphoribosyltransferase
SH05_RS16710	PF00586	AIR synthase related protein, N-terminal domain
SH05_RS16710	PF02769	AIR synthase related protein, C-terminal domain
SH05_RS16715	PF00551	Formyl transferase
SH05_RS16720	PF02503	Polyphosphate kinase middle domain
SH05_RS16720	PF13089	Polyphosphate kinase N-terminal domain
SH05_RS16720	PF13090	Polyphosphate kinase C-terminal domain
SH05_RS16725	PF02541	Ppx/GppA phosphatase family
SH05_RS16730	PF00563	EAL domain
SH05_RS16730	PF05231	SH05_RS16730
SH05_RS16740	PF11119	SH05_RS16740
SH05_RS16745	PF05433	SH05_RS16745
SH05_RS16755	PF00117	Glutamine amidotransferase class-I
SH05_RS16755	PF00958	GMP synthase C terminal domain
SH05_RS16755	PF02540	NAD synthase
SH05_RS16760	PF00478	IMP dehydrogenase / GMP reductase domain
SH05_RS16760	PF00571	CBS domain
SH05_RS16765	PF02601	SH05_RS16765
SH05_RS16765	PF13742	SH05_RS16765
SH05_RS16770	PF07191	zinc-ribbons
SH05_RS16775	PF01926	50S ribosome-binding GTPase
SH05_RS16775	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
SH05_RS16780	PF13360	PQQ-like domain
SH05_RS16785	PF09976	Tetratricopeptide repeat
SH05_RS16790	PF03129	Anticodon binding domain
SH05_RS16790	PF13393	Histidyl-tRNA synthetase
SH05_RS16795	PF04551	GcpE protein
SH05_RS16800	PF13413	Helix-turn-helix domain
SH05_RS16800	PF13464	SH05_RS16800
SH05_RS16805	PF04055	Radical SAM superfamily
SH05_RS16810	PF00334	Nucleoside diphosphate kinase
SH05_RS16815	PF00905	Penicillin binding protein transpeptidase domain
SH05_RS16815	PF00912	Transglycosylase
SH05_RS16815	PF06832	SH05_RS16815
SH05_RS16820	PF00207	Alpha-2-macroglobulin family
SH05_RS16820	PF01835	MG2 domain
SH05_RS16820	PF07703	Alpha-2-macroglobulin family N-terminal region
SH05_RS16820	PF11974	Alpha-2-macroglobulin MG1 domain
SH05_RS16825	PF00581	Rhodanese-like domain
SH05_RS16830	PF07179	SH05_RS16830
SH05_RS16830	PF14581	SH05_RS16830
SH05_RS16835	PF00883	Cytosol aminopeptidase family, catalytic domain
SH05_RS16835	PF12404	SH05_RS16835
SH05_RS16840	PF04384	Iron-sulphur cluster assembly
SH05_RS16845	PF00111	2Fe-2S iron-sulfur cluster binding domain
SH05_RS16850	PF00012	Hsp70 protein
SH05_RS16855	PF07743	HSCB C-terminal oligomerisation domain
SH05_RS16860	PF01521	Iron-sulphur cluster biosynthesis
SH05_RS16865	PF01592	NifU-like N terminal domain
SH05_RS16870	PF00266	Aminotransferase class-V
SH05_RS16875	PF02082	Transcriptional regulator
SH05_RS16880	PF00588	SpoU rRNA Methylase family
SH05_RS16885	PF00459	Inositol monophosphatase family
SH05_RS16890	PF12146	Putative lysophospholipase
SH05_RS16895	PF00874	PRD domain
SH05_RS16900	PF12832	MFS_1 like family
SH05_RS16905	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS16905	PF03466	LysR substrate binding domain
SH05_RS16910	PF00355	Rieske [2Fe-2S] domain
SH05_RS16910	PF00848	Ring hydroxylating alpha subunit (catalytic domain)
SH05_RS16915	PF00866	Ring hydroxylating beta subunit
SH05_RS16920	PF00355	Rieske [2Fe-2S] domain
SH05_RS16925	PF00106	short chain dehydrogenase
SH05_RS16930	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SH05_RS16930	PF14759	Reductase C-terminal
SH05_RS16935	PF07681	SH05_RS16935
SH05_RS16940	PF01263	Aldose 1-epimerase
SH05_RS16945	PF00107	Zinc-binding dehydrogenase
SH05_RS16945	PF08240	Alcohol dehydrogenase GroES-like domain
SH05_RS16950	PF02653	SH05_RS16950
SH05_RS16955	PF00005	ABC transporter
SH05_RS16960	PF13407	Periplasmic binding protein domain
SH05_RS16965	PF13181	Tetratricopeptide repeat
SH05_RS16965	PF13432	Tetratricopeptide repeat
SH05_RS16965	PF17128	SH05_RS16965
SH05_RS16970	PF00480	ROK family
SH05_RS16975	PF00464	Serine hydroxymethyltransferase
SH05_RS16980	PF00042	Globin
SH05_RS16980	PF00175	Oxidoreductase NAD-binding domain
SH05_RS16980	PF00970	Oxidoreductase FAD-binding domain
SH05_RS16985	PF00543	Nitrogen regulatory protein P-II
SH05_RS16990	PF00072	Response regulator receiver domain
SH05_RS16990	PF00158	Sigma-54 interaction domain
SH05_RS16995	PF13942	SH05_RS16995
SH05_RS17000	PF00512	His Kinase A (phospho-acceptor) domain
SH05_RS17000	PF00672	HAMP domain
SH05_RS17000	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH05_RS17005	PF02769	AIR synthase related protein, C-terminal domain
SH05_RS17005	PF13507	CobB/CobQ-like glutamine amidotransferase domain
SH05_RS17010	PF00497	Bacterial extracellular solute-binding proteins, family 3
SH05_RS17010	PF01464	Transglycosylase SLT domain
SH05_RS17015	PF14437	SH05_RS17015
SH05_RS17020	PF12710	haloacid dehalogenase-like hydrolase
SH05_RS17025	PF01380	SIS domain
SH05_RS17025	PF01418	Helix-turn-helix domain, rpiR family
SH05_RS17030	PF00037	4Fe-4S binding domain
SH05_RS17050	PF01648	4'-phosphopantetheinyl transferase superfamily
SH05_RS17055	PF03740	Pyridoxal phosphate biosynthesis protein PdxJ
SH05_RS17060	PF02565	Recombination protein O C terminal
SH05_RS17060	PF11967	Recombination protein O N terminal
SH05_RS17065	PF01926	50S ribosome-binding GTPase
SH05_RS17065	PF07650	KH domain
SH05_RS17070	PF00035	Double-stranded RNA binding motif
SH05_RS17070	PF14622	Ribonuclease-III-like
SH05_RS17075	PF00717	Peptidase S24-like
SH05_RS17075	PF10502	Signal peptidase, peptidase S26
SH05_RS17080	PF00009	Elongation factor Tu GTP binding domain
SH05_RS17080	PF00679	Elongation factor G C-terminus
SH05_RS17080	PF03144	Elongation factor Tu domain 2
SH05_RS17080	PF06421	GTP-binding protein LepA C-terminus
SH05_RS17085	PF04246	SH05_RS17085
SH05_RS17090	PF03888	MucB/RseB family
SH05_RS17090	PF17188	SH05_RS17090
SH05_RS17095	PF03872	Anti sigma-E protein RseA, N-terminal domain
SH05_RS17095	PF03873	Anti sigma-E protein RseA, C-terminal domain
SH05_RS17100	PF04542	Sigma-70 region 2
SH05_RS17100	PF08281	Sigma-70, region 4
SH05_RS17110	PF00890	FAD binding domain
SH05_RS17110	PF02910	Fumarate reductase flavoprotein C-term
SH05_RS17115	PF05175	Methyltransferase small domain
SH05_RS17120	PF00270	DEAD/DEAH box helicase
SH05_RS17120	PF00271	Helicase conserved C-terminal domain
SH05_RS17125	PF12035	SH05_RS17125
SH05_RS17130	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS17130	PF03466	LysR substrate binding domain
SH05_RS17135	PF01810	SH05_RS17135
SH05_RS17140	PF01228	Glycine radical
SH05_RS17145	PF03167	Uracil DNA glycosylase superfamily
SH05_RS17150	PF00588	SpoU rRNA Methylase family
SH05_RS17150	PF08032	RNA 2'-O ribose methyltransferase substrate binding
SH05_RS17160	PF00085	Thioredoxin
SH05_RS17165	PF03942	SH05_RS17165
SH05_RS17170	PF00583	Acetyltransferase (GNAT) family
SH05_RS17170	PF13380	CoA binding domain
SH05_RS17170	PF13549	ATP-grasp domain
SH05_RS17170	PF13607	Succinyl-CoA ligase like flavodoxin domain
SH05_RS17175	PF13091	PLD-like domain
SH05_RS17180	PF10043	SH05_RS17180
SH05_RS17185	PF00083	Sugar (and other) transporter
SH05_RS17215	PF00004	ATPase family associated with various cellular activities (AAA)
SH05_RS17215	PF02861	Clp amino terminal domain
SH05_RS17215	PF07724	AAA domain (Cdc48 subfamily)
SH05_RS17215	PF10431	C-terminal, D2-small domain, of ClpB protein
SH05_RS17220	PF02578	Multi-copper polyphenol oxidoreductase laccase
SH05_RS17225	PF00849	RNA pseudouridylate synthase
SH05_RS17225	PF01479	S4 domain
SH05_RS17230	PF13525	Outer membrane lipoprotein
SH05_RS17240	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
SH05_RS17245	PF00800	Prephenate dehydratase
SH05_RS17245	PF01817	Chorismate mutase type II
SH05_RS17250	PF01817	Chorismate mutase type II
SH05_RS17250	PF02153	Prephenate dehydrogenase
SH05_RS17255	PF00793	DAHP synthetase I family
SH05_RS17260	PF10973	SH05_RS17260
SH05_RS17265	PF13689	SH05_RS17265
SH05_RS17270	PF00990	GGDEF domain
SH05_RS17270	PF17152	SH05_RS17270
SH05_RS17275	PF00691	OmpA family
SH05_RS17280	PF01245	Ribosomal protein L19
SH05_RS17285	PF01746	tRNA (Guanine-1)-methyltransferase
SH05_RS17290	PF01782	RimM N-terminal domain
SH05_RS17290	PF05239	PRC-barrel domain
SH05_RS17295	PF00886	Ribosomal protein S16
SH05_RS17300	PF00448	SRP54-type protein, GTPase domain
SH05_RS17300	PF02881	SRP54-type protein, helical bundle domain
SH05_RS17300	PF02978	Signal peptide binding domain
SH05_RS17305	PF01578	SH05_RS17305
SH05_RS17310	PF00571	CBS domain
SH05_RS17310	PF01595	SH05_RS17310
SH05_RS17310	PF03471	Transporter associated domain
SH05_RS17315	PF01025	GrpE
SH05_RS17325	PF01513	ATP-NAD kinase
SH05_RS17330	PF02463	RecF/RecN/SMC N terminal domain
SH05_RS17335	PF04355	SmpA / OmlA family
SH05_RS17340	PF03658	RnfH family Ubiquitin
SH05_RS17345	PF03364	Polyketide cyclase / dehydrase and lipid transport
SH05_RS17350	PF01668	SmpB protein
SH05_RS17355	PF00589	Phage integrase family
SH05_RS17355	PF13356	Domain of unknown function (DUF4102)
SH05_RS17365	PF05930	Prophage CP4-57 regulatory protein (AlpA)
SH05_RS17370	PF13148	SH05_RS17370
SH05_RS17375	PF11726	SH05_RS17375
SH05_RS17380	PF00271	Helicase conserved C-terminal domain
SH05_RS17385	PF08878	SH05_RS17385
SH05_RS17385	PF14130	SH05_RS17385
SH05_RS17390	PF07510	SH05_RS17390
SH05_RS17395	PF15935	SH05_RS17395
SH05_RS17400	PF15933	SH05_RS17400
SH05_RS17405	PF01926	50S ribosome-binding GTPase
SH05_RS17410	PF06067	SH05_RS17410
SH05_RS17415	PF08220	DeoR-like helix-turn-helix domain
SH05_RS17415	PF13280	SH05_RS17415
SH05_RS17450	PF03230	Antirestriction protein
SH05_RS17455	PF04002	RadC-like JAB domain
SH05_RS17460	PF06154	YagB/YeeU/YfjZ family
SH05_RS17465	PF06755	SH05_RS17465
SH05_RS17505	PF00128	Alpha amylase, catalytic domain
SH05_RS17510	PF00128	Alpha amylase, catalytic domain
SH05_RS17515	PF02806	Alpha amylase, C-terminal all-beta domain
SH05_RS17520	PF08943	CsiD
SH05_RS17525	PF01266	FAD dependent oxidoreductase
SH05_RS17530	PF00171	Aldehyde dehydrogenase family
SH05_RS17535	PF00202	Aminotransferase class-III
SH05_RS17540	PF00324	Amino acid permease
SH05_RS17545	PF00392	Bacterial regulatory proteins, gntR family
SH05_RS17545	PF07729	FCD domain
SH05_RS17550	PF01476	LysM domain
SH05_RS17550	PF04972	BON domain
SH05_RS17555	PF01679	SH05_RS17555
SH05_RS17560	PF01022	Bacterial regulatory protein, arsR family
SH05_RS17565	PF00581	Rhodanese-like domain
SH05_RS17565	PF11127	Protein of unknown function (DUF2892)
SH05_RS17570	PF00816	H-NS histone family
SH05_RS17575	PF06610	SH05_RS17575
SH05_RS17580	PF09400	Protein of unknown function (DUF2002)
SH05_RS17585	PF05957	SH05_RS17585
SH05_RS17590	PF00462	Glutaredoxin
SH05_RS17595	PF07972	NrdI Flavodoxin like
SH05_RS17600	PF00317	Ribonucleotide reductase, all-alpha domain
SH05_RS17600	PF02867	Ribonucleotide reductase, barrel domain
SH05_RS17600	PF08343	Ribonucleotide reductase N-terminal
SH05_RS17605	PF00268	Ribonucleotide reductase, small chain
SH05_RS17610	PF00005	ABC transporter
SH05_RS17610	PF00571	CBS domain
SH05_RS17615	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS17620	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
SH05_RS17630	PF03591	SH05_RS17630
SH05_RS17635	PF05437	SH05_RS17635
SH05_RS17640	PF01047	MarR family
SH05_RS17645	PF00529	HlyD family secretion protein
SH05_RS17645	PF16576	SH05_RS17645
SH05_RS17650	PF07690	Major Facilitator Superfamily
SH05_RS17655	PF02664	S-Ribosylhomocysteinase (LuxS)
SH05_RS17660	PF04262	Glutamate-cysteine ligase
SH05_RS17665	PF09335	SH05_RS17665
SH05_RS17670	PF13419	Haloacid dehalogenase-like hydrolase
SH05_RS17705	PF02599	Global regulator protein family
SH05_RS17710	PF01411	tRNA synthetases class II (A)
SH05_RS17710	PF02272	DHHA1 domain
SH05_RS17710	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
SH05_RS17720	PF02631	RecX family
SH05_RS17735	PF00302	Chloramphenicol acetyltransferase
SH05_RS17740	PF02464	Competence-damaged protein
SH05_RS17745	PF13406	Transglycosylase SLT domain
SH05_RS17750	PF03608	SH05_RS17750
SH05_RS17755	PF03612	SH05_RS17755
SH05_RS17755	PF07663	SH05_RS17755
SH05_RS17760	PF03829	PTS system glucitol/sorbitol-specific IIA component
SH05_RS17765	PF00106	short chain dehydrogenase
SH05_RS17770	PF06923	SH05_RS17770
SH05_RS17775	PF00455	SH05_RS17775
SH05_RS17775	PF08220	DeoR-like helix-turn-helix domain
SH05_RS17780	PF00571	CBS domain
SH05_RS17780	PF01380	SIS domain
SH05_RS17785	PF00158	Sigma-54 interaction domain
SH05_RS17785	PF01590	GAF domain
SH05_RS17790	PF00258	Flavodoxin
SH05_RS17790	PF00301	Rubredoxin
SH05_RS17790	PF00753	Metallo-beta-lactamase superfamily
SH05_RS17795	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SH05_RS17800	PF00708	Acylphosphatase
SH05_RS17800	PF01300	Telomere recombination
SH05_RS17800	PF07503	HypF finger
SH05_RS17805	PF12798	4Fe-4S binding domain
SH05_RS17805	PF12800	4Fe-4S binding domain
SH05_RS17805	PF13247	4Fe-4S dicluster domain
SH05_RS17810	PF00356	Bacterial regulatory proteins, lacI family
SH05_RS17810	PF13377	Periplasmic binding protein-like domain
SH05_RS17815	PF00367	phosphotransferase system, EIIB
SH05_RS17815	PF02378	Phosphotransferase system, EIIC
SH05_RS17820	PF00232	Glycosyl hydrolase family 1
SH05_RS17825	PF01750	Hydrogenase maturation protease
SH05_RS17830	PF07450	SH05_RS17830
SH05_RS17835	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
SH05_RS17840	PF12838	4Fe-4S dicluster domain
SH05_RS17845	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
SH05_RS17845	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
SH05_RS17845	PF00374	Nickel-dependent hydrogenase
SH05_RS17850	PF00146	NADH dehydrogenase
SH05_RS17855	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
SH05_RS17860	PF13247	4Fe-4S dicluster domain
SH05_RS17870	PF11046	SH05_RS17870
SH05_RS17875	PF01155	Hydrogenase expression/synthesis hypA family
SH05_RS17880	PF02492	CobW/HypB/UreG, nucleotide-binding domain
SH05_RS17885	PF01455	HupF/HypC family
SH05_RS17890	PF01924	Hydrogenase formation hypA family
SH05_RS17895	PF00586	AIR synthase related protein, N-terminal domain
SH05_RS17895	PF02769	AIR synthase related protein, C-terminal domain
SH05_RS17900	PF00158	Sigma-54 interaction domain
SH05_RS17900	PF01590	GAF domain
SH05_RS17900	PF02954	Bacterial regulatory protein, Fis family
SH05_RS17905	PF11756	SH05_RS17905
SH05_RS17910	PF00488	MutS domain V
SH05_RS17910	PF01624	MutS domain I
SH05_RS17910	PF05188	MutS domain II
SH05_RS17910	PF05190	MutS family domain IV
SH05_RS17910	PF05192	MutS domain III
SH05_RS17915	PF00149	Calcineurin-like phosphoesterase
SH05_RS17920	PF00455	SH05_RS17920
SH05_RS17920	PF08220	DeoR-like helix-turn-helix domain
SH05_RS17925	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
SH05_RS17925	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
SH05_RS17930	PF07005	Protein of unknown function, DUF1537
SH05_RS17930	PF17042	SH05_RS17930
SH05_RS17935	PF00596	Class II Aldolase and Adducin N-terminal domain
SH05_RS17940	PF01261	Xylose isomerase-like TIM barrel
SH05_RS17945	PF02447	SH05_RS17945
SH05_RS17950	PF00140	Sigma-70 factor, region 1
SH05_RS17950	PF04539	Sigma-70 region 3
SH05_RS17950	PF04542	Sigma-70 region 2
SH05_RS17950	PF04545	Sigma-70, region 4
SH05_RS17955	PF01476	LysM domain
SH05_RS17955	PF01551	Peptidase family M23
SH05_RS17960	PF01135	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
SH05_RS17965	PF01975	Survival protein SurE
SH05_RS17970	PF01142	tRNA pseudouridine synthase D (TruD)
SH05_RS17975	PF02542	YgbB family
SH05_RS17980	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
SH05_RS17985	PF04977	Septum formation initiator
SH05_RS17990	PF12084	SH05_RS17990
SH05_RS17995	PF01583	Adenylylsulphate kinase
SH05_RS18000	PF00009	Elongation factor Tu GTP binding domain
SH05_RS18005	PF01507	Phosphoadenosine phosphosulfate reductase family
SH05_RS18010	PF04389	Peptidase family M28
SH05_RS18015	PF09707	CRISPR-associated protein (Cas_Cas2CT1978)
SH05_RS18020	PF01867	CRISPR associated protein Cas1
SH05_RS18025	PF08798	CRISPR associated protein
SH05_RS18030	PF09704	CRISPR-associated protein (Cas_Cas5)
SH05_RS18035	PF09344	CT1975-like protein
SH05_RS18040	PF09485	CRISPR-associated protein Cse2 (CRISPR_cse2)
SH05_RS18045	PF09481	CRISPR-associated protein Cse1 (CRISPR_cse1)
SH05_RS18050	PF00270	DEAD/DEAH box helicase
SH05_RS18050	PF00271	Helicase conserved C-terminal domain
SH05_RS18055	PF01507	Phosphoadenosine phosphosulfate reductase family
SH05_RS18060	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
SH05_RS18060	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
SH05_RS18065	PF00175	Oxidoreductase NAD-binding domain
SH05_RS18065	PF00258	Flavodoxin
SH05_RS18065	PF00667	FAD binding domain
SH05_RS18070	PF01242	6-pyruvoyl tetrahydropterin synthase
SH05_RS18075	PF12831	FAD dependent oxidoreductase
SH05_RS18085	PF04309	Glycerol-3-phosphate responsive antiterminator
SH05_RS18090	PF00766	Electron transfer flavoprotein FAD-binding domain
SH05_RS18090	PF01012	Electron transfer flavoprotein domain
SH05_RS18095	PF01012	Electron transfer flavoprotein domain
SH05_RS18100	PF00083	Sugar (and other) transporter
SH05_RS18105	PF01565	FAD binding domain
SH05_RS18105	PF02913	FAD linked oxidases, C-terminal domain
SH05_RS18110	PF13561	Enoyl-(Acyl carrier protein) reductase
SH05_RS18115	PF07690	Major Facilitator Superfamily
SH05_RS18120	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
SH05_RS18120	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
SH05_RS18125	PF04055	Radical SAM superfamily
SH05_RS18125	PF13394	4Fe-4S single cluster domain
SH05_RS18135	PF04536	TLP18
SH05_RS18140	PF00113	Enolase, C-terminal TIM barrel domain
SH05_RS18140	PF03952	Enolase, N-terminal domain
SH05_RS18145	PF00117	Glutamine amidotransferase class-I
SH05_RS18145	PF06418	CTP synthase N-terminus
SH05_RS18150	PF03819	MazG nucleotide pyrophosphohydrolase domain
SH05_RS18155	PF02452	PemK-like protein
SH05_RS18160	PF04014	Antidote-toxin recognition MazE
SH05_RS18165	PF02824	TGS domain
SH05_RS18165	PF04607	Region found in RelA / SpoT proteins
SH05_RS18165	PF13291	ACT domain
SH05_RS18165	PF13328	HD domain
SH05_RS18170	PF01938	TRAM domain
SH05_RS18170	PF05958	tRNA (Uracil-5-)-methyltransferase
SH05_RS18175	PF00072	Response regulator receiver domain
SH05_RS18175	PF00512	His Kinase A (phospho-acceptor) domain
SH05_RS18175	PF00672	HAMP domain
SH05_RS18175	PF01627	Hpt domain
SH05_RS18175	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH05_RS18175	PF09984	SH05_RS18175
SH05_RS18180	PF13378	Enolase C-terminal domain-like
SH05_RS18185	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
SH05_RS18185	PF13378	Enolase C-terminal domain-like
SH05_RS18190	PF07690	Major Facilitator Superfamily
SH05_RS18195	PF00258	Flavodoxin
SH05_RS18200	PF00849	RNA pseudouridylate synthase
SH05_RS18205	PF04287	tRNA pseudouridine synthase C
SH05_RS18215	PF07348	Syd protein (SUKH-2)
SH05_RS18220	PF14489	QueF-like protein
SH05_RS18220	PF14819	Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term
SH05_RS18225	PF03641	Possible lysine decarboxylase
SH05_RS18225	PF11892	Domain of unknown function (DUF3412)
SH05_RS18225	PF14793	Domain of unknown function (DUF4478)
SH05_RS18235	PF03313	SH05_RS18235
SH05_RS18235	PF03315	Serine dehydratase beta chain
SH05_RS18240	PF01367	5'-3' exonuclease, C-terminal SAM fold
SH05_RS18240	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
SH05_RS18245	PF00465	Iron-containing alcohol dehydrogenase
SH05_RS18250	PF00596	Class II Aldolase and Adducin N-terminal domain
SH05_RS18255	PF07690	Major Facilitator Superfamily
SH05_RS18260	PF02952	L-fucose isomerase, C-terminal domain
SH05_RS18260	PF07881	L-fucose isomerase, first N-terminal domain
SH05_RS18260	PF07882	L-fucose isomerase, second N-terminal domain
SH05_RS18265	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
SH05_RS18265	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
SH05_RS18270	PF05025	RbsD / FucU transport protein family
SH05_RS18275	PF00455	SH05_RS18275
SH05_RS18275	PF08220	DeoR-like helix-turn-helix domain
SH05_RS18280	PF01728	FtsJ-like methyltransferase
SH05_RS18285	PF04241	SH05_RS18285
SH05_RS18290	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS18290	PF03466	LysR substrate binding domain
SH05_RS18295	PF06004	Bacterial protein of unknown function (DUF903)
SH05_RS18300	PF00266	Aminotransferase class-V
SH05_RS18305	PF02657	Fe-S metabolism associated domain
SH05_RS18310	PF00899	ThiF family
SH05_RS18315	PF03562	MltA specific insert domain
SH05_RS18315	PF06725	3D domain
SH05_RS18335	PF01520	N-acetylmuramoyl-L-alanine amidase
SH05_RS18335	PF11741	AMIN domain
SH05_RS18340	PF00583	Acetyltransferase (GNAT) family
SH05_RS18340	PF00696	Amino acid kinase family
SH05_RS18350	PF00580	UvrD/REP helicase N-terminal domain
SH05_RS18350	PF12705	PD-(D/E)XK nuclease superfamily
SH05_RS18350	PF13361	UvrD-like helicase C-terminal domain
SH05_RS18355	PF00675	Insulinase (Peptidase family M16)
SH05_RS18355	PF05193	Peptidase M16 inactive domain
SH05_RS18355	PF16187	SH05_RS18355
SH05_RS18360	PF04257	Exodeoxyribonuclease V, gamma subunit
SH05_RS18365	PF12528	SH05_RS18365
SH05_RS18365	PF13544	SH05_RS18365
SH05_RS18370	PF10713	SH05_RS18370
SH05_RS18375	PF13633	Prokaryotic N-terminal methylation site
SH05_RS18380	PF13544	SH05_RS18380
SH05_RS18385	PF00303	Thymidylate synthase
SH05_RS18390	PF01790	SH05_RS18390
SH05_RS18395	PF00391	PEP-utilising enzyme, mobile domain
SH05_RS18395	PF01590	GAF domain
SH05_RS18395	PF02896	PEP-utilising enzyme, TIM barrel domain
SH05_RS18395	PF05524	PEP-utilising enzyme, N-terminal
SH05_RS18400	PF00293	NUDIX domain
SH05_RS18415	PF02976	DNA mismatch repair enzyme MutH
SH05_RS18420	PF03741	SH05_RS18420
SH05_RS18425	PF06004	Bacterial protein of unknown function (DUF903)
SH05_RS18430	PF00248	Aldo/keto reductase family
SH05_RS18435	PF07690	Major Facilitator Superfamily
SH05_RS18440	PF00501	AMP-binding enzyme
SH05_RS18440	PF01553	Acyltransferase
SH05_RS18445	PF00356	Bacterial regulatory proteins, lacI family
SH05_RS18445	PF13377	Periplasmic binding protein-like domain
SH05_RS18450	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
SH05_RS18450	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
SH05_RS18455	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS18455	PF03466	LysR substrate binding domain
SH05_RS18460	PF01177	Asp/Glu/Hydantoin racemase
SH05_RS18465	PF00083	Sugar (and other) transporter
SH05_RS18470	PF13561	Enoyl-(Acyl carrier protein) reductase
SH05_RS18475	PF04962	KduI/IolB family
SH05_RS18480	PF00108	Thiolase, N-terminal domain
SH05_RS18480	PF02803	Thiolase, C-terminal domain
SH05_RS18485	PF03222	Tryptophan/tyrosine permease family
SH05_RS18490	PF00196	Bacterial regulatory proteins, luxR family
SH05_RS18495	PF00486	Transcriptional regulatory protein, C terminal
SH05_RS18515	PF07720	Tetratricopeptide repeat
SH05_RS18520	PF00486	Transcriptional regulatory protein, C terminal
SH05_RS18530	PF01464	Transglycosylase SLT domain
SH05_RS18535	PF00196	Bacterial regulatory proteins, luxR family
SH05_RS18560	PF00665	Integrase core domain
SH05_RS18560	PF13276	SH05_RS18560
SH05_RS18565	PF01527	Transposase
SH05_RS18585	PF01476	LysM domain
SH05_RS18585	PF01551	Peptidase family M23
SH05_RS18590	PF01315	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
SH05_RS18590	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
SH05_RS18595	PF00941	FAD binding domain in molybdopterin dehydrogenase
SH05_RS18595	PF03450	CO dehydrogenase flavoprotein C-terminal domain
SH05_RS18600	PF00111	2Fe-2S iron-sulfur cluster binding domain
SH05_RS18600	PF01799	[2Fe-2S] binding domain
SH05_RS18605	PF00158	Sigma-54 interaction domain
SH05_RS18605	PF02954	Bacterial regulatory protein, Fis family
SH05_RS18605	PF13188	PAS domain
SH05_RS18610	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
SH05_RS18610	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
SH05_RS18615	PF00291	Pyridoxal-phosphate dependent enzyme
SH05_RS18620	PF01546	Peptidase family M20/M25/M40
SH05_RS18620	PF07687	Peptidase dimerisation domain
SH05_RS18625	PF01979	Amidohydrolase family
SH05_RS18630	PF00696	Amino acid kinase family
SH05_RS18635	PF02625	XdhC and CoxI family
SH05_RS18635	PF13478	XdhC Rossmann domain
SH05_RS18645	PF12804	MobA-like NTP transferase domain
SH05_RS18650	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SH05_RS18650	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
SH05_RS18655	PF01979	Amidohydrolase family
SH05_RS18660	PF00941	FAD binding domain in molybdopterin dehydrogenase
SH05_RS18660	PF03450	CO dehydrogenase flavoprotein C-terminal domain
SH05_RS18665	PF01315	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
SH05_RS18665	PF01799	[2Fe-2S] binding domain
SH05_RS18665	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
SH05_RS18670	PF00860	Permease family
SH05_RS18675	PF01979	Amidohydrolase family
SH05_RS18680	PF00860	Permease family
SH05_RS18685	PF13247	4Fe-4S dicluster domain
SH05_RS18690	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SH05_RS18690	PF13247	4Fe-4S dicluster domain
SH05_RS18690	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
SH05_RS18700	PF00860	Permease family
SH05_RS18710	PF00293	NUDIX domain
SH05_RS18715	PF00152	tRNA synthetases class II (D, K and N)
SH05_RS18715	PF01336	OB-fold nucleic acid binding domain
SH05_RS18720	PF00472	RF-1 domain
SH05_RS18720	PF03462	PCRF domain
SH05_RS18725	PF01368	DHH family
SH05_RS18725	PF02272	DHHA1 domain
SH05_RS18730	PF10411	Disulfide bond isomerase protein N-terminus
SH05_RS18730	PF13098	Thioredoxin-like domain
SH05_RS18735	PF00589	Phage integrase family
SH05_RS18735	PF02899	Phage integrase, N-terminal SAM-like domain
SH05_RS18740	PF00258	Flavodoxin
SH05_RS18745	PF07254	SH05_RS18745
SH05_RS18750	PF03937	Flavinator of succinate dehydrogenase
SH05_RS18755	PF01571	Aminomethyltransferase folate-binding domain
SH05_RS18760	PF03006	SH05_RS18760
SH05_RS18765	PF04266	ASCH domain
SH05_RS18770	PF00232	Glycosyl hydrolase family 1
SH05_RS18775	PF13561	Enoyl-(Acyl carrier protein) reductase
SH05_RS18780	PF02347	Glycine cleavage system P-protein
SH05_RS18785	PF01597	Glycine cleavage H-protein
SH05_RS18790	PF01571	Aminomethyltransferase folate-binding domain
SH05_RS18790	PF08669	Glycine cleavage T-protein C-terminal barrel domain
SH05_RS18795	PF01494	FAD binding domain
SH05_RS18800	PF01494	FAD binding domain
SH05_RS18805	PF00557	Metallopeptidase family M24
SH05_RS18805	PF05195	Aminopeptidase P, N-terminal domain
SH05_RS18810	PF03695	Uncharacterised protein family (UPF0149)
SH05_RS18815	PF05164	Cell division protein ZapA
SH05_RS18820	PF01812	5-formyltetrahydrofolate cyclo-ligase family
SH05_RS18825	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
SH05_RS18825	PF01842	ACT domain
SH05_RS18825	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
SH05_RS18830	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
SH05_RS18835	PF03466	LysR substrate binding domain
SH05_RS18840	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS18840	PF03466	LysR substrate binding domain
SH05_RS18845	PF01642	Methylmalonyl-CoA mutase
SH05_RS18845	PF02310	B12 binding domain
SH05_RS18850	PF03308	ArgK protein
SH05_RS18855	PF00378	Enoyl-CoA hydratase/isomerase family
SH05_RS18860	PF02550	Acetyl-CoA hydrolase/transferase N-terminal domain
SH05_RS18860	PF13336	Acetyl-CoA hydrolase/transferase C-terminal domain
SH05_RS18865	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS18865	PF03466	LysR substrate binding domain
SH05_RS18870	PF04402	Protein of unknown function (DUF541)
SH05_RS18875	PF01810	SH05_RS18875
SH05_RS18880	PF00924	Mechanosensitive ion channel
SH05_RS18880	PF05552	Conserved TM helix
SH05_RS18885	PF01116	Fructose-bisphosphate aldolase class-II
SH05_RS18890	PF00162	Phosphoglycerate kinase
SH05_RS18895	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SH05_RS18895	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
SH05_RS18905	PF05068	Mannitol repressor
SH05_RS18910	PF03320	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
SH05_RS18915	PF00107	Zinc-binding dehydrogenase
SH05_RS18915	PF08240	Alcohol dehydrogenase GroES-like domain
SH05_RS18920	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
SH05_RS18920	PF02378	Phosphotransferase system, EIIC
SH05_RS18925	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
SH05_RS18930	PF00456	Transketolase, thiamine diphosphate binding domain
SH05_RS18930	PF02779	Transketolase, pyrimidine binding domain
SH05_RS18930	PF02780	Transketolase, C-terminal domain
SH05_RS18935	PF01435	Peptidase family M48
SH05_RS18940	PF00491	Arginase family
SH05_RS18945	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
SH05_RS18945	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
SH05_RS18950	PF11036	SH05_RS18950
SH05_RS18960	PF10885	SH05_RS18960
SH05_RS18965	PF00438	S-adenosylmethionine synthetase, N-terminal domain
SH05_RS18965	PF02772	S-adenosylmethionine synthetase, central domain
SH05_RS18965	PF02773	S-adenosylmethionine synthetase, C-terminal domain
SH05_RS18975	PF10263	SH05_RS18975
SH05_RS18980	PF04231	Endonuclease I
SH05_RS18985	PF04452	RNA methyltransferase
SH05_RS18990	PF02951	Prokaryotic glutathione synthetase, N-terminal domain
SH05_RS18990	PF02955	Prokaryotic glutathione synthetase, ATP-grasp domain
SH05_RS18995	PF02622	Uncharacterized ACR, COG1678
SH05_RS19000	PF03652	Uncharacterised protein family (UPF0081)
SH05_RS19005	PF00437	Type II/IV secretion system protein
SH05_RS19010	PF01168	Alanine racemase, N-terminal domain
SH05_RS19015	PF02325	SH05_RS19015
SH05_RS19020	PF02594	Uncharacterised ACR, YggU family COG1872
SH05_RS19025	PF01725	Ham1 family
SH05_RS19030	PF04055	Radical SAM superfamily
SH05_RS19030	PF06969	HemN C-terminal domain
SH05_RS19035	PF06717	SH05_RS19035
SH05_RS19040	PF00710	Asparaginase
SH05_RS19045	PF11101	SH05_RS19045
SH05_RS19050	PF12035	SH05_RS19050
SH05_RS19055	PF04320	SH05_RS19055
SH05_RS19060	PF02390	Putative methyltransferase
SH05_RS19065	PF00633	Helix-hairpin-helix motif
SH05_RS19065	PF00730	HhH-GPD superfamily base excision DNA repair protein
SH05_RS19065	PF10576	Iron-sulfur binding domain of endonuclease III
SH05_RS19065	PF14815	NUDIX domain
SH05_RS19070	PF04362	Bacterial Fe(2+) trafficking
SH05_RS19075	PF01464	Transglycosylase SLT domain
SH05_RS19075	PF11873	Domain of unknown function (DUF3393)
SH05_RS19080	PF03825	SH05_RS19080
SH05_RS19085	PF01276	Orn/Lys/Arg decarboxylase, major domain
SH05_RS19085	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
SH05_RS19085	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
SH05_RS19090	PF04474	SH05_RS19090
SH05_RS19100	PF04612	Type II secretion system (T2SS), protein M
SH05_RS19105	PF12693	GspL periplasmic domain
SH05_RS19110	PF11356	Type IV pilus biogenesis
SH05_RS19115	PF16549	SH05_RS19115
SH05_RS19120	PF01478	Type IV leader peptidase family
SH05_RS19120	PF06750	SH05_RS19120
SH05_RS19125	PF13322	SH05_RS19125
SH05_RS19125	PF13402	Peptidase M60-like family
SH05_RS19135	PF02652	SH05_RS19135
SH05_RS19140	PF01274	Malate synthase
SH05_RS19145	PF03928	Domain of unknown function (DUF336)
SH05_RS19150	PF02754	SH05_RS19150
SH05_RS19150	PF13183	4Fe-4S dicluster domain
SH05_RS19155	PF01565	FAD binding domain
SH05_RS19160	PF01565	FAD binding domain
SH05_RS19160	PF02913	FAD linked oxidases, C-terminal domain
SH05_RS19165	PF00392	Bacterial regulatory proteins, gntR family
SH05_RS19165	PF07729	FCD domain
SH05_RS19175	PF01609	Transposase DDE domain
SH05_RS19175	PF05598	SH05_RS19175
SH05_RS19180	PF01943	SH05_RS19180
SH05_RS19200	PF01384	SH05_RS19200
SH05_RS19205	PF03738	Glutathionylspermidine synthase preATP-grasp
SH05_RS19205	PF05257	CHAP domain
SH05_RS19210	PF02798	Glutathione S-transferase, N-terminal domain
SH05_RS19210	PF13410	Glutathione S-transferase, C-terminal domain
SH05_RS19215	PF01455	HupF/HypC family
SH05_RS19220	PF01155	Hydrogenase expression/synthesis hypA family
SH05_RS19225	PF11939	Protein of unknown function (DUF3457)
SH05_RS19230	PF01750	Hydrogenase maturation protease
SH05_RS19235	PF00374	Nickel-dependent hydrogenase
SH05_RS19240	PF03916	SH05_RS19240
SH05_RS19245	PF13247	4Fe-4S dicluster domain
SH05_RS19250	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
SH05_RS19250	PF14720	NiFe/NiFeSe hydrogenase small subunit C-terminal
SH05_RS19260	PF11115	SH05_RS19260
SH05_RS19270	PF00248	Aldo/keto reductase family
SH05_RS19275	PF03350	SH05_RS19275
SH05_RS19280	PF13561	Enoyl-(Acyl carrier protein) reductase
SH05_RS19285	PF02472	Biopolymer transport protein ExbD/TolR
SH05_RS19290	PF01618	SH05_RS19290
SH05_RS19300	PF01053	Cys/Met metabolism PLP-dependent enzyme
SH05_RS19305	PF09335	SH05_RS19305
SH05_RS19310	PF06719	SH05_RS19310
SH05_RS19310	PF12833	Helix-turn-helix domain
SH05_RS19320	PF00465	Iron-containing alcohol dehydrogenase
SH05_RS19325	PF00248	Aldo/keto reductase family
SH05_RS19330	PF12883	Protein of unknown function (DUF3828)
SH05_RS19335	PF04728	Lipoprotein leucine-zipper
SH05_RS19340	PF04055	Radical SAM superfamily
SH05_RS19340	PF08497	SH05_RS19340
SH05_RS19340	PF11842	SH05_RS19340
SH05_RS19345	PF00394	Multicopper oxidase
SH05_RS19345	PF07731	Multicopper oxidase
SH05_RS19345	PF07732	Multicopper oxidase
SH05_RS19350	PF01553	Acyltransferase
SH05_RS19355	PF00521	DNA gyrase/topoisomerase IV, subunit A
SH05_RS19355	PF03989	DNA gyrase C-terminal domain, beta-propeller
SH05_RS19360	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
SH05_RS19365	PF15731	SH05_RS19365
SH05_RS19370	PF15723	SH05_RS19370
SH05_RS19375	PF06445	GyrI-like small molecule binding domain
SH05_RS19380	PF04076	Bacterial OB fold (BOF) protein
SH05_RS19385	PF00072	Response regulator receiver domain
SH05_RS19385	PF00486	Transcriptional regulatory protein, C terminal
SH05_RS19390	PF00512	His Kinase A (phospho-acceptor) domain
SH05_RS19390	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH05_RS19390	PF08521	SH05_RS19390
SH05_RS19395	PF10840	SH05_RS19395
SH05_RS19400	PF02525	Flavodoxin-like fold
SH05_RS19405	PF03992	Antibiotic biosynthesis monooxygenase
SH05_RS19410	PF00204	DNA gyrase B
SH05_RS19410	PF00986	DNA gyrase B subunit, carboxyl terminus
SH05_RS19410	PF01751	Toprim domain
SH05_RS19410	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH05_RS19415	PF05728	Uncharacterised protein family (UPF0227)
SH05_RS19420	PF00149	Calcineurin-like phosphoesterase
SH05_RS19425	PF06853	SH05_RS19425
SH05_RS19430	PF00293	NUDIX domain
SH05_RS19435	PF02321	Outer membrane efflux protein
SH05_RS19445	PF06693	SH05_RS19445
SH05_RS19450	PF03738	Glutathionylspermidine synthase preATP-grasp
SH05_RS19455	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
SH05_RS19460	PF02535	SH05_RS19460
SH05_RS19465	PF13260	SH05_RS19465
SH05_RS19470	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
SH05_RS19475	PF04380	SH05_RS19475
SH05_RS19480	PF00419	Fimbrial protein
SH05_RS19485	PF01527	Transposase
SH05_RS19490	PF00665	Integrase core domain
SH05_RS19490	PF13276	SH05_RS19490
SH05_RS19495	PF00577	Outer membrane usher protein
SH05_RS19495	PF13953	PapC C-terminal domain
SH05_RS19495	PF13954	PapC N-terminal domain
SH05_RS19500	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
SH05_RS19500	PF02753	Pili assembly chaperone PapD, C-terminal domain
SH05_RS19505	PF00419	Fimbrial protein
SH05_RS19510	PF08971	Glycogen synthesis protein
SH05_RS19515	PF07290	SH05_RS19515
SH05_RS19520	PF01145	SPFH domain / Band 7 family
SH05_RS19520	PF15975	SH05_RS19520
SH05_RS19535	PF00294	pfkB family carbohydrate kinase
SH05_RS19535	PF01467	Cytidylyltransferase
SH05_RS19540	PF03710	Glutamate-ammonia ligase adenylyltransferase
SH05_RS19540	PF08335	GlnD PII-uridylyltransferase
SH05_RS19545	PF01928	CYTH domain
SH05_RS19555	PF08239	Bacterial SH3 domain
SH05_RS19560	PF01743	Poly A polymerase head domain
SH05_RS19560	PF01966	HD domain
SH05_RS19560	PF12627	Probable RNA and SrmB- binding site of polymerase A
SH05_RS19565	PF02673	SH05_RS19565
SH05_RS19570	PF02152	Dihydroneopterin aldolase
SH05_RS19575	PF02660	SH05_RS19575
SH05_RS19580	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS19580	PF03466	LysR substrate binding domain
SH05_RS19585	PF05681	SH05_RS19585
SH05_RS19595	PF00939	Sodium:sulfate symporter transmembrane region
SH05_RS19600	PF00814	Glycoprotease family
SH05_RS19605	PF01165	Ribosomal protein S21
SH05_RS19610	PF01807	CHC2 zinc finger
SH05_RS19610	PF08275	DNA primase catalytic core, N-terminal domain
SH05_RS19610	PF08278	DNA primase DnaG DnaB-binding
SH05_RS19610	PF10410	DnaB-helicase binding domain of primase
SH05_RS19610	PF13155	Toprim-like
SH05_RS19615	PF00140	Sigma-70 factor, region 1
SH05_RS19615	PF03979	Sigma-70 factor, region 1
SH05_RS19615	PF04539	Sigma-70 region 3
SH05_RS19615	PF04542	Sigma-70 region 2
SH05_RS19615	PF04545	Sigma-70, region 4
SH05_RS19615	PF04546	Sigma-70, non-essential region
SH05_RS19620	PF03167	Uracil DNA glycosylase superfamily
SH05_RS19630	PF04954	Siderophore-interacting protein
SH05_RS19630	PF08021	Siderophore-interacting FAD-binding domain
SH05_RS19635	PF03551	Transcriptional regulator PadR-like family
SH05_RS19640	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SH05_RS19640	PF00672	HAMP domain
SH05_RS19640	PF08447	PAS fold
SH05_RS19645	PF00202	Aminotransferase class-III
SH05_RS19650	PF01588	Putative tRNA binding domain
SH05_RS19655	PF00356	Bacterial regulatory proteins, lacI family
SH05_RS19655	PF13377	Periplasmic binding protein-like domain
SH05_RS19660	PF00703	Glycosyl hydrolases family 2
SH05_RS19660	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
SH05_RS19660	PF02837	Glycosyl hydrolases family 2, sugar binding domain
SH05_RS19660	PF02929	Beta galactosidase small chain
SH05_RS19660	PF16353	SH05_RS19660
SH05_RS19665	PF04074	Domain of unknown function (DUF386)
SH05_RS19670	PF13520	Amino acid permease
SH05_RS19680	PF01204	Trehalase
SH05_RS19685	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
SH05_RS19685	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SH05_RS19690	PF01381	Helix-turn-helix
SH05_RS19695	PF09907	SH05_RS19695
SH05_RS19705	PF05175	Methyltransferase small domain
SH05_RS19710	PF01863	Protein of unknown function DUF45
SH05_RS19715	PF02698	DUF218 domain
SH05_RS19720	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
SH05_RS19725	PF03741	SH05_RS19725
SH05_RS19730	PF00375	Sodium:dicarboxylate symporter family
SH05_RS19735	PF10688	SH05_RS19735
SH05_RS19740	PF04295	SH05_RS19740
SH05_RS19740	PF08666	SAF domain
SH05_RS19745	PF02614	Glucuronate isomerase
SH05_RS19750	PF07690	Major Facilitator Superfamily
SH05_RS19755	PF00392	Bacterial regulatory proteins, gntR family
SH05_RS19755	PF07729	FCD domain
SH05_RS19760	PF09335	SH05_RS19760
SH05_RS19765	PF13721	SecD export protein N-terminal TM region
SH05_RS19770	PF06476	SH05_RS19770
SH05_RS19775	PF05957	SH05_RS19775
SH05_RS19780	PF07332	SH05_RS19780
SH05_RS19785	PF13997	SH05_RS19785
SH05_RS19790	PF07681	SH05_RS19790
SH05_RS19795	PF13409	Glutathione S-transferase, N-terminal domain
SH05_RS19795	PF13410	Glutathione S-transferase, C-terminal domain
SH05_RS19800	PF05656	SH05_RS19800
SH05_RS19805	PF05656	SH05_RS19805
SH05_RS19810	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS19810	PF03466	LysR substrate binding domain
SH05_RS19815	PF02678	Pirin
SH05_RS19825	PF03313	SH05_RS19825
SH05_RS19835	PF03313	SH05_RS19835
SH05_RS19835	PF03315	Serine dehydratase beta chain
SH05_RS19840	PF01042	Endoribonuclease L-PSP
SH05_RS19845	PF01228	Glycine radical
SH05_RS19845	PF02901	Pyruvate formate lyase
SH05_RS19855	PF01609	Transposase DDE domain
SH05_RS19855	PF05598	SH05_RS19855
SH05_RS19860	PF00871	Acetokinase family
SH05_RS19865	PF03222	Tryptophan/tyrosine permease family
SH05_RS19870	PF00291	Pyridoxal-phosphate dependent enzyme
SH05_RS19875	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS19875	PF03466	LysR substrate binding domain
SH05_RS19895	PF02595	Glycerate kinase family
SH05_RS19900	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
SH05_RS19900	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
SH05_RS19905	PF03328	HpcH/HpaI aldolase/citrate lyase family
SH05_RS19910	PF07690	Major Facilitator Superfamily
SH05_RS19915	PF04295	SH05_RS19915
SH05_RS19915	PF08666	SAF domain
SH05_RS19920	PF15937	SH05_RS19920
SH05_RS19925	PF11663	SH05_RS19925
SH05_RS19930	PF00455	SH05_RS19930
SH05_RS19930	PF08220	DeoR-like helix-turn-helix domain
SH05_RS19935	PF08013	Tagatose 6 phosphate kinase
SH05_RS19940	PF03830	PTS system sorbose subfamily IIB component
SH05_RS19945	PF03609	SH05_RS19945
SH05_RS19950	PF01979	Amidohydrolase family
SH05_RS19955	PF01380	SIS domain
SH05_RS19960	PF01116	Fructose-bisphosphate aldolase class-II
SH05_RS19965	PF03830	PTS system sorbose subfamily IIB component
SH05_RS19970	PF03609	SH05_RS19970
SH05_RS19975	PF03613	SH05_RS19975
SH05_RS19980	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
SH05_RS19985	PF00419	Fimbrial protein
SH05_RS19990	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
SH05_RS19990	PF02753	Pili assembly chaperone PapD, C-terminal domain
SH05_RS19995	PF00577	Outer membrane usher protein
SH05_RS19995	PF13953	PapC C-terminal domain
SH05_RS19995	PF13954	PapC N-terminal domain
SH05_RS20000	PF00419	Fimbrial protein
SH05_RS20005	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
SH05_RS20010	PF04348	LppC putative lipoprotein
SH05_RS20015	PF02021	Uncharacterised protein family UPF0102
SH05_RS20020	PF13580	SIS domain
SH05_RS20025	PF04972	BON domain
SH05_RS20030	PF03773	SH05_RS20030
SH05_RS20035	PF13460	NADH(P)-binding
SH05_RS20040	PF01965	DJ-1/PfpI family
SH05_RS20050	PF01541	GIY-YIG catalytic domain
SH05_RS20055	PF13508	Acetyltransferase (GNAT) domain
SH05_RS20060	PF02036	SCP-2 sterol transfer family
SH05_RS20065	PF01136	SH05_RS20065
SH05_RS20070	PF01136	SH05_RS20070
SH05_RS20075	PF00296	Luciferase-like monooxygenase
SH05_RS20080	PF03222	Tryptophan/tyrosine permease family
SH05_RS20090	PF00270	DEAD/DEAH box helicase
SH05_RS20090	PF00271	Helicase conserved C-terminal domain
SH05_RS20090	PF03880	DbpA RNA binding domain
SH05_RS20090	PF12343	SH05_RS20090
SH05_RS20095	PF07719	Tetratricopeptide repeat
SH05_RS20095	PF13181	Tetratricopeptide repeat
SH05_RS20100	PF00013	KH domain
SH05_RS20100	PF00575	S1 RNA binding domain
SH05_RS20100	PF01138	3' exoribonuclease family, domain 1
SH05_RS20100	PF03725	3' exoribonuclease family, domain 2
SH05_RS20100	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
SH05_RS20105	PF00312	Ribosomal protein S15
SH05_RS20110	PF01509	TruB family pseudouridylate synthase (N terminal domain)
SH05_RS20110	PF09157	Pseudouridine synthase II TruB, C-terminal
SH05_RS20110	PF16198	SH05_RS20110
SH05_RS20115	PF02033	Ribosome-binding factor A
SH05_RS20120	PF00009	Elongation factor Tu GTP binding domain
SH05_RS20120	PF04760	Translation initiation factor IF-2, N-terminal region
SH05_RS20120	PF08364	SH05_RS20120
SH05_RS20120	PF11987	Translation-initiation factor 2
SH05_RS20125	PF00575	S1 RNA binding domain
SH05_RS20125	PF08529	NusA N-terminal domain
SH05_RS20125	PF13184	NusA-like KH domain
SH05_RS20125	PF14520	Helix-hairpin-helix domain
SH05_RS20130	PF02576	Uncharacterised BCR, YhbC family COG0779
SH05_RS20140	PF00764	Arginosuccinate synthase
SH05_RS20145	PF00884	Sulfatase
SH05_RS20155	PF03840	Preprotein translocase SecG subunit
SH05_RS20160	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
SH05_RS20160	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
SH05_RS20160	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
SH05_RS20160	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
SH05_RS20165	PF00809	Pterin binding enzyme
SH05_RS20170	PF00004	ATPase family associated with various cellular activities (AAA)
SH05_RS20170	PF01434	Peptidase family M41
SH05_RS20170	PF06480	FtsH Extracellular
SH05_RS20175	PF01728	FtsJ-like methyltransferase
SH05_RS20180	PF01985	CRS1 / YhbY (CRM) domain
SH05_RS20185	PF01272	Transcription elongation factor, GreA/GreB, C-term
SH05_RS20185	PF03449	Transcription elongation factor, N-terminal
SH05_RS20190	PF02113	D-Ala-D-Ala carboxypeptidase 3 (S13) family
SH05_RS20195	PF01018	GTP1/OBG
SH05_RS20195	PF01926	50S ribosome-binding GTPase
SH05_RS20200	PF00892	EamA-like transporter family
SH05_RS20205	PF01016	Ribosomal L27 protein
SH05_RS20210	PF00829	Ribosomal prokaryotic L21 protein
SH05_RS20215	PF00348	Polyprenyl synthetase
SH05_RS20220	PF13693	Winged helix-turn-helix DNA-binding
SH05_RS20225	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
SH05_RS20230	PF01722	BolA-like protein
SH05_RS20235	PF13466	STAS domain
SH05_RS20240	PF05494	Toluene tolerance, Ttg2
SH05_RS20245	PF02470	SH05_RS20245
SH05_RS20250	PF02405	SH05_RS20250
SH05_RS20255	PF00005	ABC transporter
SH05_RS20260	PF01699	Sodium/calcium exchanger protein
SH05_RS20265	PF00571	CBS domain
SH05_RS20265	PF01380	SIS domain
SH05_RS20270	PF08282	haloacid dehalogenase-like hydrolase
SH05_RS20275	PF06835	Lipopolysaccharide-assembly, LptC-related
SH05_RS20280	PF03968	OstA-like protein
SH05_RS20285	PF00005	ABC transporter
SH05_RS20285	PF12399	Branched-chain amino acid ATP-binding cassette transporter
SH05_RS20290	PF00309	SH05_RS20290
SH05_RS20290	PF04552	Sigma-54, DNA binding domain
SH05_RS20290	PF04963	Sigma-54 factor, core binding domain
SH05_RS20295	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
SH05_RS20300	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
SH05_RS20305	PF03668	SH05_RS20305
SH05_RS20310	PF00381	PTS HPr component phosphorylation site
SH05_RS20315	PF10707	SH05_RS20315
SH05_RS20320	PF01609	Transposase DDE domain
SH05_RS20320	PF05598	SH05_RS20320
SH05_RS20330	PF06551	SH05_RS20330
SH05_RS20335	PF06250	SH05_RS20335
SH05_RS20340	PF04074	Domain of unknown function (DUF386)
SH05_RS20345	PF00480	ROK family
SH05_RS20350	PF04131	Putative N-acetylmannosamine-6-phosphate epimerase
SH05_RS20355	PF07690	Major Facilitator Superfamily
SH05_RS20360	PF00701	Dihydrodipicolinate synthetase family
SH05_RS20365	PF00392	Bacterial regulatory proteins, gntR family
SH05_RS20365	PF07729	FCD domain
SH05_RS20370	PF03606	SH05_RS20370
SH05_RS20375	PF04386	Stringent starvation protein B
SH05_RS20380	PF00043	Glutathione S-transferase, C-terminal domain
SH05_RS20380	PF02798	Glutathione S-transferase, N-terminal domain
SH05_RS20385	PF00380	Ribosomal protein S9/S16
SH05_RS20390	PF00572	Ribosomal protein L13
SH05_RS20395	PF03969	AFG1-like ATPase
SH05_RS20400	PF06295	SH05_RS20400
SH05_RS20405	PF00595	PDZ domain (Also known as DHR or GLGF)
SH05_RS20405	PF13180	PDZ domain
SH05_RS20405	PF13365	Trypsin-like peptidase domain
SH05_RS20410	PF13180	PDZ domain
SH05_RS20410	PF13365	Trypsin-like peptidase domain
SH05_RS20415	PF00056	lactate/malate dehydrogenase, NAD binding domain
SH05_RS20415	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
SH05_RS20420	PF01316	Arginine repressor, DNA binding domain
SH05_RS20420	PF02863	Arginine repressor, C-terminal domain
SH05_RS20425	PF07338	Protein of unknown function (DUF1471)
SH05_RS20430	PF01337	Barstar (barnase inhibitor)
SH05_RS20435	PF04632	SH05_RS20435
SH05_RS20440	PF13437	HlyD family secretion protein
SH05_RS20440	PF13533	Biotin-lipoyl like
SH05_RS20445	PF07869	SH05_RS20445
SH05_RS20450	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS20450	PF03466	LysR substrate binding domain
SH05_RS20455	PF01523	Putative modulator of DNA gyrase
SH05_RS20460	PF13116	SH05_RS20460
SH05_RS20460	PF13502	SH05_RS20460
SH05_RS20465	PF00575	S1 RNA binding domain
SH05_RS20465	PF10150	Ribonuclease E/G family
SH05_RS20470	PF02545	Maf-like protein
SH05_RS20475	PF04093	SH05_RS20475
SH05_RS20480	PF04085	rod shape-determining protein MreC
SH05_RS20485	PF06723	MreB/Mbl protein
SH05_RS20495	PF00563	EAL domain
SH05_RS20495	PF00990	GGDEF domain
SH05_RS20495	PF17157	SH05_RS20495
SH05_RS20500	PF00107	Zinc-binding dehydrogenase
SH05_RS20500	PF08240	Alcohol dehydrogenase GroES-like domain
SH05_RS20520	PF00364	Biotin-requiring enzyme
SH05_RS20525	PF00289	Carbamoyl-phosphate synthase L chain, N-terminal domain
SH05_RS20525	PF02785	Biotin carboxylase C-terminal domain
SH05_RS20525	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
SH05_RS20530	PF06196	SH05_RS20530
SH05_RS20535	PF00474	Sodium:solute symporter family
SH05_RS20540	PF06325	Ribosomal protein L11 methyltransferase (PrmA)
SH05_RS20545	PF01207	Dihydrouridine synthase (Dus)
SH05_RS20550	PF02954	Bacterial regulatory protein, Fis family
SH05_RS20555	PF01555	DNA methylase
SH05_RS20560	PF10831	SH05_RS20560
SH05_RS20565	PF00440	Bacterial regulatory proteins, tetR family
SH05_RS20565	PF08361	MAATS-type transcriptional repressor, C-terminal region
SH05_RS20570	PF00529	HlyD family secretion protein
SH05_RS20570	PF16576	SH05_RS20570
SH05_RS20575	PF00873	AcrB/AcrD/AcrF family
SH05_RS20590	PF00497	Bacterial extracellular solute-binding proteins, family 3
SH05_RS20595	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS20600	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS20605	PF00005	ABC transporter
SH05_RS20645	PF00132	Bacterial transferase hexapeptide (six repeats)
SH05_RS20650	PF07369	Protein of unknown function (DUF1488)
SH05_RS20655	PF01488	Shikimate / quinate 5-dehydrogenase
SH05_RS20655	PF08501	Shikimate dehydrogenase substrate binding domain
SH05_RS20660	PF01300	Telomere recombination
SH05_RS20665	PF01396	SH05_RS20665
SH05_RS20670	PF04361	SH05_RS20670
SH05_RS20675	PF02481	DNA recombination-mediator protein A
SH05_RS20680	PF01327	Polypeptide deformylase
SH05_RS20685	PF00551	Formyl transferase
SH05_RS20685	PF02911	Formyl transferase, C-terminal domain
SH05_RS20690	PF01029	NusB family
SH05_RS20690	PF01189	NOL1/NOP2/sun family
SH05_RS20695	PF02080	TrkA-C domain
SH05_RS20695	PF02254	TrkA-N domain
SH05_RS20700	PF01741	Large-conductance mechanosensitive channel, MscL
SH05_RS20705	PF03889	SH05_RS20705
SH05_RS20710	PF13411	MerR HTH family regulatory protein
SH05_RS20715	PF09350	SH05_RS20715
SH05_RS20720	PF01196	Ribosomal protein L17
SH05_RS20725	PF01000	RNA polymerase Rpb3/RpoA insert domain
SH05_RS20725	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
SH05_RS20725	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
SH05_RS20730	PF00163	Ribosomal protein S4/S9 N-terminal domain
SH05_RS20730	PF01479	S4 domain
SH05_RS20735	PF00411	Ribosomal protein S11
SH05_RS20740	PF00416	Ribosomal protein S13/S18
SH05_RS20745	PF00444	Ribosomal protein L36
SH05_RS20750	PF00344	SecY translocase
SH05_RS20755	PF00828	Ribosomal protein L18e/L15
SH05_RS20760	PF00327	Ribosomal protein L30p/L7e
SH05_RS20765	PF00333	Ribosomal protein S5, N-terminal domain
SH05_RS20765	PF03719	Ribosomal protein S5, C-terminal domain
SH05_RS20770	PF00861	Ribosomal L18p/L5e family
SH05_RS20775	PF00347	Ribosomal protein L6
SH05_RS20780	PF00410	Ribosomal protein S8
SH05_RS20785	PF00253	Ribosomal protein S14p/S29e
SH05_RS20790	PF00281	Ribosomal protein L5
SH05_RS20790	PF00673	ribosomal L5P family C-terminus
SH05_RS20795	PF00467	KOW motif
SH05_RS20795	PF17136	SH05_RS20795
SH05_RS20800	PF00238	Ribosomal protein L14p/L23e
SH05_RS20805	PF00366	Ribosomal protein S17
SH05_RS20810	PF00831	Ribosomal L29 protein
SH05_RS20815	PF00252	Ribosomal protein L16p/L10e
SH05_RS20820	PF00189	Ribosomal protein S3, C-terminal domain
SH05_RS20820	PF07650	KH domain
SH05_RS20825	PF00237	Ribosomal protein L22p/L17e
SH05_RS20830	PF00203	Ribosomal protein S19
SH05_RS20835	PF00181	Ribosomal Proteins L2, RNA binding domain
SH05_RS20835	PF03947	Ribosomal Proteins L2, C-terminal domain
SH05_RS20840	PF00276	Ribosomal protein L23
SH05_RS20845	PF00573	Ribosomal protein L4/L1 family
SH05_RS20850	PF00297	Ribosomal protein L3
SH05_RS20855	PF00338	Ribosomal protein S10p/S20e
SH05_RS20865	PF01471	Putative peptidoglycan binding domain
SH05_RS20865	PF13401	AAA domain
SH05_RS20870	PF11356	Type IV pilus biogenesis
SH05_RS20875	PF00263	SH05_RS20875
SH05_RS20875	PF03958	Bacterial type II/III secretion system short domain
SH05_RS20880	PF00437	Type II/IV secretion system protein
SH05_RS20885	PF00482	Type II secretion system (T2SS), protein F
SH05_RS20890	PF08334	Type II secretion system (T2SS), protein G
SH05_RS20890	PF13544	SH05_RS20890
SH05_RS20895	PF12019	Type II transport protein GspH
SH05_RS20895	PF13544	SH05_RS20895
SH05_RS20900	PF02501	Type II secretion system (T2SS), protein I
SH05_RS20900	PF13544	SH05_RS20900
SH05_RS20905	PF13544	SH05_RS20905
SH05_RS20910	PF03934	Type II secretion system (T2SS), protein K
SH05_RS20915	PF05134	Type II secretion system (T2SS), protein L
SH05_RS20915	PF12693	GspL periplasmic domain
SH05_RS20920	PF04612	Type II secretion system (T2SS), protein M
SH05_RS20925	PF01478	Type IV leader peptidase family
SH05_RS20930	PF00210	Ferritin-like domain
SH05_RS20935	PF04324	BFD-like [2Fe-2S] binding domain
SH05_RS20940	PF02839	Carbohydrate binding domain
SH05_RS20945	PF00009	Elongation factor Tu GTP binding domain
SH05_RS20945	PF03143	Elongation factor Tu C-terminal domain
SH05_RS20945	PF03144	Elongation factor Tu domain 2
SH05_RS20950	PF00009	Elongation factor Tu GTP binding domain
SH05_RS20950	PF00679	Elongation factor G C-terminus
SH05_RS20950	PF03144	Elongation factor Tu domain 2
SH05_RS20950	PF03764	Elongation factor G, domain IV
SH05_RS20950	PF14492	Elongation Factor G, domain II
SH05_RS20955	PF00177	Ribosomal protein S7p/S5e
SH05_RS20960	PF00164	Ribosomal protein S12/S23
SH05_RS20965	PF04077	DsrH like protein
SH05_RS20970	PF02635	DsrE/DsrF-like family
SH05_RS20975	PF02635	DsrE/DsrF-like family
SH05_RS20980	PF08348	SH05_RS20980
SH05_RS20980	PF13309	SH05_RS20980
SH05_RS20985	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
SH05_RS20985	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
SH05_RS20990	PF04102	SlyX
SH05_RS20995	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
SH05_RS21000	PF09526	SH05_RS21000
SH05_RS21005	PF00999	Sodium/hydrogen exchanger family
SH05_RS21005	PF02254	TrkA-N domain
SH05_RS21010	PF02525	Flavodoxin-like fold
SH05_RS21015	PF00005	ABC transporter
SH05_RS21015	PF12848	ABC transporter
SH05_RS21020	PF00561	alpha/beta hydrolase fold
SH05_RS21025	PF06794	Uncharacterised protein family (UPF0270)
SH05_RS21030	PF00485	Phosphoribulokinase / Uridine kinase family
SH05_RS21035	PF02566	OsmC-like protein
SH05_RS21045	PF00027	Cyclic nucleotide-binding domain
SH05_RS21045	PF00325	Bacterial regulatory proteins, crp family
SH05_RS21050	PF12805	SH05_RS21050
SH05_RS21050	PF13515	SH05_RS21050
SH05_RS21055	PF00202	Aminotransferase class-III
SH05_RS21060	PF00117	Glutamine amidotransferase class-I
SH05_RS21065	PF02661	Fic/DOC family
SH05_RS21070	PF10832	SH05_RS21070
SH05_RS21075	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
SH05_RS21080	PF07690	Major Facilitator Superfamily
SH05_RS21085	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
SH05_RS21085	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
SH05_RS21085	PF04324	BFD-like [2Fe-2S] binding domain
SH05_RS21085	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SH05_RS21090	PF13806	Rieske-like [2Fe-2S] domain
SH05_RS21095	PF01226	Formate/nitrite transporter
SH05_RS21100	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
SH05_RS21100	PF10414	Sirohaem synthase dimerisation region
SH05_RS21100	PF13241	Putative NAD(P)-binding
SH05_RS21100	PF14824	Sirohaem biosynthesis protein central
SH05_RS21105	PF13978	SH05_RS21105
SH05_RS21110	PF13520	Amino acid permease
SH05_RS21115	PF01380	SIS domain
SH05_RS21120	PF01261	Xylose isomerase-like TIM barrel
SH05_RS21125	PF00294	pfkB family carbohydrate kinase
SH05_RS21130	PF00392	Bacterial regulatory proteins, gntR family
SH05_RS21130	PF07702	UTRA domain
SH05_RS21135	PF00155	Aminotransferase class I and II
SH05_RS21140	PF10797	SH05_RS21140
SH05_RS21145	PF10941	SH05_RS21145
SH05_RS21150	PF02126	Phosphotriesterase family
SH05_RS21155	PF01676	Metalloenzyme superfamily
SH05_RS21160	PF01168	Alanine racemase, N-terminal domain
SH05_RS21170	PF14502	Helix-turn-helix domain
SH05_RS21170	PF14503	YhfZ C-terminal domain
SH05_RS21175	PF00579	tRNA synthetases class I (W and Y)
SH05_RS21180	PF13419	Haloacid dehalogenase-like hydrolase
SH05_RS21185	PF00834	Ribulose-phosphate 3 epimerase family
SH05_RS21190	PF02086	D12 class N6 adenine-specific DNA methyltransferase
SH05_RS21195	PF05036	Sporulation related domain
SH05_RS21200	PF01761	3-dehydroquinate synthase
SH05_RS21205	PF01202	Shikimate kinase
SH05_RS21210	PF00263	SH05_RS21210
SH05_RS21210	PF03958	Bacterial type II/III secretion system short domain
SH05_RS21215	PF10748	SH05_RS21215
SH05_RS21225	PF05137	SH05_RS21225
SH05_RS21235	PF00905	Penicillin binding protein transpeptidase domain
SH05_RS21235	PF00912	Transglycosylase
SH05_RS21235	PF17092	SH05_RS21235
SH05_RS21240	PF00293	NUDIX domain
SH05_RS21245	PF07095	Intracellular growth attenuator protein IgaA
SH05_RS21250	PF13419	Haloacid dehalogenase-like hydrolase
SH05_RS21255	PF01479	S4 domain
SH05_RS21260	PF01430	Hsp33 protein
SH05_RS21265	PF13687	SH05_RS21265
SH05_RS21275	PF01293	Phosphoenolpyruvate carboxykinase
SH05_RS21280	PF00512	His Kinase A (phospho-acceptor) domain
SH05_RS21280	PF00672	HAMP domain
SH05_RS21280	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH05_RS21285	PF00072	Response regulator receiver domain
SH05_RS21285	PF00486	Transcriptional regulatory protein, C terminal
SH05_RS21290	PF01272	Transcription elongation factor, GreA/GreB, C-term
SH05_RS21290	PF03449	Transcription elongation factor, N-terminal
SH05_RS21295	PF00575	S1 RNA binding domain
SH05_RS21295	PF09371	Tex-like protein N-terminal domain
SH05_RS21295	PF12836	Helix-hairpin-helix motif
SH05_RS21295	PF16921	SH05_RS21295
SH05_RS21300	PF04023	FeoA domain
SH05_RS21305	PF02421	Ferrous iron transport protein B
SH05_RS21305	PF07664	SH05_RS21305
SH05_RS21305	PF07670	Nucleoside recognition
SH05_RS21310	PF09012	FeoC like transcriptional regulator
SH05_RS21315	PF04754	SH05_RS21315
SH05_RS21320	PF00561	alpha/beta hydrolase fold
SH05_RS21325	PF00156	Phosphoribosyl transferase domain
SH05_RS21330	PF01106	NifU-like domain
SH05_RS21330	PF01521	Iron-sulphur cluster biosynthesis
SH05_RS21335	PF02447	SH05_RS21335
SH05_RS21340	PF02446	4-alpha-glucanotransferase
SH05_RS21345	PF00343	Carbohydrate phosphorylase
SH05_RS21350	PF00196	Bacterial regulatory proteins, luxR family
SH05_RS21355	PF01137	RNA 3'-terminal phosphate cyclase
SH05_RS21355	PF05189	RNA 3'-terminal phosphate cyclase (RTC), insert domain
SH05_RS21360	PF01139	tRNA-splicing ligase RtcB
SH05_RS21365	PF00158	Sigma-54 interaction domain
SH05_RS21365	PF06956	SH05_RS21365
SH05_RS21370	PF00455	SH05_RS21370
SH05_RS21370	PF08220	DeoR-like helix-turn-helix domain
SH05_RS21375	PF01694	Rhomboid family
SH05_RS21375	PF12122	Protein of unknown function (DUF3582)
SH05_RS21380	PF00581	Rhodanese-like domain
SH05_RS21385	PF01266	FAD dependent oxidoreductase
SH05_RS21385	PF16901	SH05_RS21385
SH05_RS21395	PF00343	Carbohydrate phosphorylase
SH05_RS21400	PF00534	Glycosyl transferases group 1
SH05_RS21400	PF08323	Starch synthase catalytic domain
SH05_RS21405	PF00483	Nucleotidyl transferase
SH05_RS21410	PF00128	Alpha amylase, catalytic domain
SH05_RS21410	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
SH05_RS21415	PF00128	Alpha amylase, catalytic domain
SH05_RS21415	PF02806	Alpha amylase, C-terminal all-beta domain
SH05_RS21415	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
SH05_RS21420	PF01118	Semialdehyde dehydrogenase, NAD binding domain
SH05_RS21420	PF02774	Semialdehyde dehydrogenase, dimerisation domain
SH05_RS21425	PF01914	SH05_RS21425
SH05_RS21430	PF02447	SH05_RS21430
SH05_RS21435	PF01202	Shikimate kinase
SH05_RS21440	PF00356	Bacterial regulatory proteins, lacI family
SH05_RS21440	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
SH05_RS21445	PF02678	Pirin
SH05_RS21450	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
SH05_RS21450	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
SH05_RS21455	PF00583	Acetyltransferase (GNAT) family
SH05_RS21460	PF05638	Protein of unknown function (DUF796)
SH05_RS21460	PF12639	DNase/tRNase domain of colicin-like bacteriocin
SH05_RS21470	PF03400	SH05_RS21470
SH05_RS21475	PF15567	SH05_RS21475
SH05_RS21480	PF01019	Gamma-glutamyltranspeptidase
SH05_RS21485	PF10956	SH05_RS21485
SH05_RS21490	PF03009	Glycerophosphoryl diester phosphodiesterase family
SH05_RS21495	PF00005	ABC transporter
SH05_RS21495	PF08402	TOBE domain
SH05_RS21500	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS21505	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS21510	PF13416	Bacterial extracellular solute-binding protein
SH05_RS21515	PF12035	SH05_RS21515
SH05_RS21520	PF00005	ABC transporter
SH05_RS21525	PF00005	ABC transporter
SH05_RS21525	PF12399	Branched-chain amino acid ATP-binding cassette transporter
SH05_RS21530	PF02653	SH05_RS21530
SH05_RS21530	PF11862	SH05_RS21530
SH05_RS21535	PF02653	SH05_RS21535
SH05_RS21540	PF13458	Periplasmic binding protein
SH05_RS21545	PF12568	Acetyltransferase (GNAT) domain
SH05_RS21550	PF12035	SH05_RS21550
SH05_RS21555	PF13458	Periplasmic binding protein
SH05_RS21560	PF04542	Sigma-70 region 2
SH05_RS21560	PF04545	Sigma-70, region 4
SH05_RS21565	PF02687	SH05_RS21565
SH05_RS21570	PF00005	ABC transporter
SH05_RS21575	PF00448	SRP54-type protein, GTPase domain
SH05_RS21575	PF02881	SRP54-type protein, helical bundle domain
SH05_RS21580	PF03602	Conserved hypothetical protein 95
SH05_RS21585	PF06611	SH05_RS21585
SH05_RS21590	PF10694	Protein of unknown function (DUF2500)
SH05_RS21595	PF07947	SH05_RS21595
SH05_RS21600	PF00122	E1-E2 ATPase
SH05_RS21600	PF00403	Heavy-metal-associated domain
SH05_RS21600	PF00702	haloacid dehalogenase-like hydrolase
SH05_RS21605	PF01206	Sulfurtransferase TusA
SH05_RS21610	PF02592	SH05_RS21610
SH05_RS21615	PF08786	Domain of unknown function (DUF1795)
SH05_RS21620	PF07690	Major Facilitator Superfamily
SH05_RS21625	PF01594	SH05_RS21625
SH05_RS21630	PF01648	4'-phosphopantetheinyl transferase superfamily
SH05_RS21635	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
SH05_RS21640	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS21645	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS21650	PF00005	ABC transporter
SH05_RS21655	PF00005	ABC transporter
SH05_RS21660	PF01402	Ribbon-helix-helix protein, copG family
SH05_RS21660	PF08753	NikR C terminal nickel binding domain
SH05_RS21665	PF03527	SH05_RS21665
SH05_RS21665	PF05593	SH05_RS21665
SH05_RS21665	PF14220	SH05_RS21665
SH05_RS21670	PF15631	SH05_RS21670
SH05_RS21680	PF01609	Transposase DDE domain
SH05_RS21680	PF13808	SH05_RS21680
SH05_RS21685	PF12698	ABC-2 family transporter protein
SH05_RS21690	PF00005	ABC transporter
SH05_RS21690	PF12698	ABC-2 family transporter protein
SH05_RS21695	PF13437	HlyD family secretion protein
SH05_RS21695	PF13533	Biotin-lipoyl like
SH05_RS21700	PF13258	SH05_RS21700
SH05_RS21720	PF10951	SH05_RS21720
SH05_RS21725	PF03486	HI0933-like protein
SH05_RS21730	PF01384	SH05_RS21730
SH05_RS21735	PF10625	SH05_RS21735
SH05_RS21740	PF00582	Universal stress protein family
SH05_RS21745	PF00854	POT family
SH05_RS21750	PF04445	Putative SAM-dependent methyltransferase
SH05_RS21755	PF01432	Peptidase family M3
SH05_RS21760	PF04378	Ribosomal RNA small subunit methyltransferase D, RsmJ
SH05_RS21765	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
SH05_RS21765	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SH05_RS21780	PF01022	Bacterial regulatory protein, arsR family
SH05_RS21785	PF02040	SH05_RS21785
SH05_RS21790	PF03960	ArsC family
SH05_RS21800	PF01609	Transposase DDE domain
SH05_RS21800	PF05598	SH05_RS21800
SH05_RS21810	PF03843	SH05_RS21810
SH05_RS21815	PF00196	Bacterial regulatory proteins, luxR family
SH05_RS21820	PF02308	SH05_RS21820
SH05_RS21825	PF06411	HdeA/HdeB family
SH05_RS21830	PF06411	HdeA/HdeB family
SH05_RS21835	PF03729	SH05_RS21835
SH05_RS21840	PF00196	Bacterial regulatory proteins, luxR family
SH05_RS21850	PF00529	HlyD family secretion protein
SH05_RS21850	PF16576	SH05_RS21850
SH05_RS21855	PF00873	AcrB/AcrD/AcrF family
SH05_RS21860	PF12833	Helix-turn-helix domain
SH05_RS21865	PF12833	Helix-turn-helix domain
SH05_RS21870	PF00282	Pyridoxal-dependent decarboxylase conserved domain
SH05_RS21875	PF00034	Cytochrome c
SH05_RS21875	PF03150	Di-haem cytochrome c peroxidase
SH05_RS21875	PF14376	SH05_RS21875
SH05_RS21880	PF01204	Trehalase
SH05_RS21885	PF00196	Bacterial regulatory proteins, luxR family
SH05_RS21890	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS21890	PF03466	LysR substrate binding domain
SH05_RS21895	PF03631	SH05_RS21895
SH05_RS21900	PF00083	Sugar (and other) transporter
SH05_RS21900	PF07690	Major Facilitator Superfamily
SH05_RS21905	PF05170	SH05_RS21905
SH05_RS21910	PF00563	EAL domain
SH05_RS21920	PF00294	pfkB family carbohydrate kinase
SH05_RS21925	PF00675	Insulinase (Peptidase family M16)
SH05_RS21925	PF05193	Peptidase M16 inactive domain
SH05_RS21930	PF00375	Sodium:dicarboxylate symporter family
SH05_RS21935	PF00563	EAL domain
SH05_RS21935	PF00672	HAMP domain
SH05_RS21935	PF00990	GGDEF domain
SH05_RS21935	PF17154	SH05_RS21935
SH05_RS21940	PF05420	SH05_RS21940
SH05_RS21940	PF13432	Tetratricopeptide repeat
SH05_RS21940	PF14559	Tetratricopeptide repeat
SH05_RS21945	PF01270	Glycosyl hydrolases family 8
SH05_RS21950	PF03170	Bacterial cellulose synthase subunit
SH05_RS21955	PF00535	Glycosyl transferase family 2
SH05_RS21955	PF03552	Cellulose synthase
SH05_RS21955	PF07238	PilZ domain
SH05_RS21960	PF06564	YhjQ protein
SH05_RS21965	PF10945	SH05_RS21965
SH05_RS21970	PF01609	Transposase DDE domain
SH05_RS21970	PF05598	SH05_RS21970
SH05_RS21975	PF10995	SH05_RS21975
SH05_RS21980	PF11120	SH05_RS21980
SH05_RS21985	PF11658	SH05_RS21985
SH05_RS21990	PF13940	SH05_RS21990
SH05_RS22000	PF03222	Tryptophan/tyrosine permease family
SH05_RS22005	PF00005	ABC transporter
SH05_RS22005	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
SH05_RS22010	PF00005	ABC transporter
SH05_RS22010	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
SH05_RS22015	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS22015	PF12911	SH05_RS22015
SH05_RS22020	PF00528	Binding-protein-dependent transport system inner membrane component
SH05_RS22030	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
SH05_RS22045	PF00884	Sulfatase
SH05_RS22045	PF08019	SH05_RS22045
SH05_RS22050	PF07690	Major Facilitator Superfamily
SH05_RS22055	PF03797	Autotransporter beta-domain
SH05_RS22060	PF03352	Methyladenine glycosylase
SH05_RS22065	PF13673	Acetyltransferase (GNAT) domain
SH05_RS22070	PF00384	Molybdopterin oxidoreductase
SH05_RS22070	PF01568	Molydopterin dinucleotide binding domain
SH05_RS22075	PF00691	OmpA family
SH05_RS22075	PF13488	SH05_RS22075
SH05_RS22080	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
SH05_RS22080	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
SH05_RS22085	PF11254	SH05_RS22085
SH05_RS22090	PF01381	Helix-turn-helix
SH05_RS22095	PF00313	'Cold-shock' DNA-binding domain
SH05_RS22100	PF01848	SH05_RS22100
SH05_RS22105	PF13518	Helix-turn-helix domain
SH05_RS22110	PF00665	Integrase core domain
SH05_RS22110	PF13276	SH05_RS22110
SH05_RS22115	PF02092	SH05_RS22115
SH05_RS22115	PF05746	DALR anticodon binding domain
SH05_RS22120	PF02091	Glycyl-tRNA synthetase alpha subunit
SH05_RS22125	PF13983	SH05_RS22125
SH05_RS22130	PF01757	SH05_RS22130
SH05_RS22135	PF05360	SH05_RS22135
SH05_RS22140	PF05360	SH05_RS22140
SH05_RS22145	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
SH05_RS22145	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
SH05_RS22155	PF13407	Periplasmic binding protein domain
SH05_RS22160	PF03400	SH05_RS22160
SH05_RS22165	PF13407	Periplasmic binding protein domain
SH05_RS22170	PF00005	ABC transporter
SH05_RS22175	PF02653	SH05_RS22175
SH05_RS22180	PF12833	Helix-turn-helix domain
SH05_RS22180	PF13377	Periplasmic binding protein-like domain
SH05_RS22185	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
SH05_RS22190	PF00128	Alpha amylase, catalytic domain
SH05_RS22195	PF00155	Aminotransferase class I and II
SH05_RS22200	PF12035	SH05_RS22200
SH05_RS22205	PF13247	4Fe-4S dicluster domain
SH05_RS22210	PF01614	Bacterial transcriptional regulator
SH05_RS22210	PF09339	IclR helix-turn-helix domain
SH05_RS22215	PF02615	Malate/L-lactate dehydrogenase
SH05_RS22220	PF04074	Domain of unknown function (DUF386)
SH05_RS22225	PF04290	SH05_RS22225
SH05_RS22230	PF06808	SH05_RS22230
SH05_RS22235	PF03480	Bacterial extracellular solute-binding protein, family 7
SH05_RS22240	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
SH05_RS22240	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
SH05_RS22245	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
SH05_RS22250	PF01261	Xylose isomerase-like TIM barrel
SH05_RS22255	PF00596	Class II Aldolase and Adducin N-terminal domain
SH05_RS22260	PF06629	SH05_RS22260
SH05_RS22265	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH05_RS22265	PF03466	LysR substrate binding domain
SH05_RS22270	PF00529	HlyD family secretion protein
SH05_RS22270	PF16576	SH05_RS22270
SH05_RS22275	PF11742	SH05_RS22275
SH05_RS22285	PF00171	Aldehyde dehydrogenase family
SH05_RS22290	PF00465	Iron-containing alcohol dehydrogenase
SH05_RS22295	PF00009	Elongation factor Tu GTP binding domain
SH05_RS22295	PF03144	Elongation factor Tu domain 2
SH05_RS22295	PF09106	Elongation factor SelB, winged helix
SH05_RS22295	PF09107	Elongation factor SelB, winged helix
SH05_RS22300	PF03841	L-seryl-tRNA selenium transferase
SH05_RS22300	PF12390	SH05_RS22300
SH05_RS22305	PF00043	Glutathione S-transferase, C-terminal domain
SH05_RS22305	PF13417	Glutathione S-transferase, N-terminal domain
SH05_RS22310	PF03527	SH05_RS22310
SH05_RS22310	PF05593	SH05_RS22310
SH05_RS22310	PF15606	SH05_RS22310
SH05_RS22315	PF13646	HEAT repeats
SH05_RS22320	PF03527	SH05_RS22320
SH05_RS22335	PF00529	HlyD family secretion protein
SH05_RS22335	PF16576	SH05_RS22335
SH05_RS22340	PF11742	SH05_RS22340
SH05_RS22350	PF01232	Mannitol dehydrogenase Rossmann domain
SH05_RS22350	PF08125	Mannitol dehydrogenase C-terminal domain
SH05_RS22355	PF05068	Mannitol repressor
SH05_RS22365	PF10928	Protein of unknown function (DUF2810)
SH05_RS22370	PF02652	SH05_RS22370
SH05_RS22375	PF00392	Bacterial regulatory proteins, gntR family
SH05_RS22375	PF07729	FCD domain
SH05_RS22380	PF01070	FMN-dependent dehydrogenase
SH05_RS22385	PF00588	SpoU rRNA Methylase family
SH05_RS22390	PF00132	Bacterial transferase hexapeptide (six repeats)
SH05_RS22390	PF06426	Serine acetyltransferase, N-terminal
SH05_RS22395	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
SH05_RS22395	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
SH05_RS22400	PF02556	Preprotein translocase subunit SecB
SH05_RS22405	PF00462	Glutaredoxin
SH05_RS22410	PF00581	Rhodanese-like domain
SH05_RS22420	PF01676	Metalloenzyme superfamily
SH05_RS22420	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
SH05_RS22425	PF01551	Peptidase family M23
SH05_RS22430	PF04748	Divergent polysaccharide deacetylase
SH05_RS22435	PF00535	Glycosyl transferase family 2
SH05_RS22440	PF00107	Zinc-binding dehydrogenase
SH05_RS22440	PF08240	Alcohol dehydrogenase GroES-like domain
SH05_RS22445	PF00155	Aminotransferase class I and II
SH05_RS22450	PF09612	SH05_RS22450
SH05_RS22455	PF01370	NAD dependent epimerase/dehydratase family
SH05_RS22460	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
SH05_RS22465	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
SH05_RS22470	PF04932	SH05_RS22470
SH05_RS22475	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
SH05_RS22485	PF06176	Lipopolysaccharide core biosynthesis protein (WaaY)
SH05_RS22490	PF01501	Glycosyl transferase family 8
SH05_RS22490	PF08437	SH05_RS22490
SH05_RS22495	PF01501	Glycosyl transferase family 8
SH05_RS22495	PF08437	SH05_RS22495
SH05_RS22500	PF00534	Glycosyl transferases group 1
SH05_RS22500	PF13439	Glycosyltransferase Family 4
SH05_RS22510	PF06293	Lipopolysaccharide kinase (Kdo/WaaP) family
SH05_RS22515	PF00534	Glycosyl transferases group 1
SH05_RS22515	PF13439	Glycosyltransferase Family 4
SH05_RS22520	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
SH05_RS22525	PF00534	Glycosyl transferases group 1
SH05_RS22525	PF04413	3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
SH05_RS22530	PF01467	Cytidylyltransferase
SH05_RS22535	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
SH05_RS22535	PF06827	Zinc finger found in FPG and IleRS
SH05_RS22535	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
SH05_RS22540	PF00471	Ribosomal protein L33
SH05_RS22545	PF00830	Ribosomal L28 family
SH05_RS22550	PF04002	RadC-like JAB domain
SH05_RS22555	PF02441	Flavoprotein
SH05_RS22555	PF04127	DNA / pantothenate metabolism flavoprotein
SH05_RS22560	PF00692	dUTPase
SH05_RS22565	PF00440	Bacterial regulatory proteins, tetR family
SH05_RS22570	PF00156	Phosphoribosyl transferase domain
SH05_RS22575	PF01138	3' exoribonuclease family, domain 1
SH05_RS22575	PF03725	3' exoribonuclease family, domain 2
SH05_RS22580	PF03755	SH05_RS22580
SH05_RS22580	PF08340	SH05_RS22580
SH05_RS22590	PF03458	SH05_RS22590
SH05_RS22595	PF01653	NAD-dependent DNA ligase adenylation domain
SH05_RS22595	PF03120	NAD-dependent DNA ligase OB-fold domain
SH05_RS22600	PF00625	Guanylate kinase
SH05_RS22605	PF01192	RNA polymerase Rpb6
SH05_RS22610	PF02824	TGS domain
SH05_RS22610	PF04607	Region found in RelA / SpoT proteins
SH05_RS22610	PF13291	ACT domain
SH05_RS22610	PF13328	HD domain
SH05_RS22615	PF00588	SpoU rRNA Methylase family
SH05_RS22615	PF12105	SpoU, rRNA methylase, C-terminal
SH05_RS22620	PF00270	DEAD/DEAH box helicase
SH05_RS22620	PF00271	Helicase conserved C-terminal domain
SH05_RS22620	PF17191	SH05_RS22620
SH05_RS22625	PF03616	SH05_RS22625
SH05_RS22630	PF00860	Permease family
SH05_RS22635	PF05170	SH05_RS22635
SH05_RS22640	PF01055	Glycosyl hydrolases family 31
SH05_RS22640	PF13802	Galactose mutarotase-like
SH05_RS22645	PF13347	MFS/sugar transport protein
SH05_RS22660	PF07690	Major Facilitator Superfamily
SH05_RS22665	PF00892	EamA-like transporter family
SH05_RS22670	PF03180	NLPA lipoprotein
SH05_RS22685	PF07690	Major Facilitator Superfamily
SH05_RS22690	PF06711	SH05_RS22690
SH05_RS22695	PF00860	Permease family
SH05_RS22700	PF01979	Amidohydrolase family
SH05_RS22700	PF13382	Adenine deaminase C-terminal domain
SH05_RS22705	PF07690	Major Facilitator Superfamily
SH05_RS22710	PF07690	Major Facilitator Superfamily
SH05_RS22715	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH05_RS22715	PF05231	SH05_RS22715
SH05_RS22715	PF07730	Histidine kinase
SH05_RS22720	PF00072	Response regulator receiver domain
SH05_RS22720	PF00196	Bacterial regulatory proteins, luxR family
SH05_RS22725	PF01842	ACT domain
SH05_RS22730	PF00205	Thiamine pyrophosphate enzyme, central domain
SH05_RS22730	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
SH05_RS22730	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
SH05_RS22735	PF08049	SH05_RS22735
SH05_RS22750	PF13939	SH05_RS22750
SH05_RS22755	PF07690	Major Facilitator Superfamily
SH05_RS22765	PF02656	SH05_RS22765
SH05_RS22770	PF02656	SH05_RS22770
SH05_RS22780	PF00884	Sulfatase
SH05_RS22780	PF16347	SH05_RS22780
SH05_RS22785	PF00474	Sodium:solute symporter family
SH05_RS22790	PF02311	AraC-like ligand binding domain
SH05_RS22790	PF12833	Helix-turn-helix domain
SH05_RS22795	PF02056	Family 4 glycosyl hydrolase
SH05_RS22800	PF00367	phosphotransferase system, EIIB
SH05_RS22805	PF02378	Phosphotransferase system, EIIC
SH05_RS22810	PF00392	Bacterial regulatory proteins, gntR family
SH05_RS22810	PF07702	UTRA domain
SH05_RS22815	PF02080	TrkA-C domain
SH05_RS22815	PF06826	SH05_RS22815
SH05_RS22820	PF00011	Hsp20/alpha crystallin family
SH05_RS22825	PF00011	Hsp20/alpha crystallin family
SH05_RS22830	PF07119	SH05_RS22830
SH05_RS22835	PF07676	WD40-like Beta Propeller Repeat
SH05_RS22835	PF12566	SH05_RS22835
SH05_RS22840	PF01494	FAD binding domain
SH05_RS22845	PF07690	Major Facilitator Superfamily
SH05_RS22850	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
SH05_RS22850	PF13378	Enolase C-terminal domain-like
SH05_RS22855	PF01081	KDPG and KHG aldolase
SH05_RS22860	PF05035	2-keto-3-deoxy-galactonokinase
SH05_RS22865	PF00392	Bacterial regulatory proteins, gntR family
SH05_RS22865	PF07729	FCD domain
SH05_RS22875	PF08282	haloacid dehalogenase-like hydrolase
SH05_RS22880	PF06078	Bacterial protein of unknown function (DUF937)
SH05_RS22885	PF12035	SH05_RS22885
SH05_RS22890	PF00204	DNA gyrase B
SH05_RS22890	PF00986	DNA gyrase B subunit, carboxyl terminus
SH05_RS22890	PF01751	Toprim domain
SH05_RS22890	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH05_RS22895	PF02463	RecF/RecN/SMC N terminal domain
SH05_RS22900	PF00712	DNA polymerase III beta subunit, N-terminal domain
SH05_RS22900	PF02767	DNA polymerase III beta subunit, central domain
SH05_RS22900	PF02768	DNA polymerase III beta subunit, C-terminal domain
SH05_RS22905	PF00308	Bacterial dnaA  protein
SH05_RS22905	PF08299	Bacterial dnaA protein helix-turn-helix
SH05_RS22905	PF11638	DnaA N-terminal domain
SH05_RS22965	PF03400	SH05_RS22965
SH05_RS22975	PF07151	SH05_RS22975
SH05_RS22985	PF00871	Acetokinase family