locus_tag old_locus_tag gene Name start end strand product note type ID NCBI SH05_RS00005 SH05_00005 rpmH rpmH 607 747 + 50S ribosomal protein L34 in Escherichia coli transcription of this gene is enhanced by polyamines gene gene0 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00005 SH05_RS00010 SH05_00010 rnpA rnpA 764 1123 + ribonuclease P protein component protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus%3B this enzyme also cleaves other RNA substrates gene gene1 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00010 SH05_RS00015 SH05_00015 SH05_RS00015 1087 1344 + membrane protein insertion efficiency factor YidD gene gene2 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00015 SH05_RS00020 SH05_00020 SH05_RS00020 1347 2993 + protein translocase component YidC functions to insert inner membrane proteins into the IM in Escherichia coli%3B interacts with transmembrane segments%3B functions in both Sec-dependent and -independent membrane insertion%3B similar to Oxa1p in mitochondria gene gene3 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00020 SH05_RS00025 SH05_00025 trmE trmE 3099 4463 + tRNA modification GTPase MnmE in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine%2C which is found in the wobble position of some tRNAs and affects ribosomal frameshifting%3B shows potassium-dependent dimerization and GTP hydrolysis%3B also involved in regulation of glutamate-dependent acid resistance and activation of gadE gene gene4 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00025 SH05_RS00030 SH05_00030 SH05_RS00030 4706 4780 + tryptophanase leader peptide gene gene5 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00030 SH05_RS00035 SH05_00035 tnaA tnaA 5001 6416 + tryptophanase tryptophan indole-lyase%3B catalyzes the formation of indole and pyruvate from tryptophan%3B also has xysteine desulfhydrase activity gene gene6 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00035 SH05_RS00040 SH05_00040 SH05_RS00040 6507 7754 + low affinity tryptophan permease tryptophan transporter of high affinity gene gene7 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00040 SH05_RS00045 SH05_00045 SH05_RS00045 7886 9061 + multidrug resistance protein MdtL Confers resistance to chloramphenicol gene gene8 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00045 SH05_RS00050 SH05_00050 SH05_RS00050 9036 9995 + transcriptional regulator Involved in anaerobic NO protection gene gene9 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00050 SH05_RS00055 SH05_00055 SH05_RS00055 10152 10901 + 4'-phosphopantetheinyl transferase gene gene10 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00055 SH05_RS00060 SH05_00060 SH05_RS00060 10923 11489 + chromate reductase gene gene11 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00060 SH05_RS00065 SH05_00065 SH05_RS00065 11543 12880 - adenine permease AdeP involved in the transport or adenine gene gene12 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00065 SH05_RS00070 SH05_00070 SH05_RS00070 13045 13710 + 6-phosphogluconate phosphatase YieH%3B catalyzes the dephosphorylation of phosphoenolpyruvate%2C AMP and p-nitrophenyl phosphate%3B purine and pyrimidine nucleotides are secondary substrates%3B member of the haloacid dehalogenase-like hydrolases superfamily gene gene13 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00070 SH05_RS00075 SH05_00075 SH05_RS00075 13777 14244 + protein CbrB might be involved in hypersensitivity to nitrofurzone gene gene14 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00075 SH05_RS00080 SH05_00080 SH05_RS00080 14293 14880 + hypothetical protein gene gene15 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00080 SH05_RS00085 SH05_00085 SH05_RS00085 14942 15664 - 6-phosphogluconolactonase gene gene16 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00085 SH05_RS00090 SH05_00090 SH05_RS00090 15679 16848 - xylanase gene gene17 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00090 SH05_RS00095 SH05_00095 SH05_RS00095 16875 18491 - porin BglH gene gene18 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00095 SH05_RS00100 SH05_00100 SH05_RS00100 18560 19972 - 6-phospho-beta-glucosidase BglB gene gene19 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00100 SH05_RS00105 SH05_00105 SH05_RS00105 19991 21868 - PTS beta-glucoside EIIBCA component phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel gene gene20 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00105 SH05_RS00110 SH05_00110 SH05_RS00110 22002 22838 - cryptic beta-glucoside bgl operon antiterminator positive regulator of the beta-glucoside operon%3B transcriptional antiterminator gene gene21 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00110 SH05_RS00115 SH05_00115 SH05_RS00115 23124 23849 - phosphate-specific transport system accessory protein PhoU regulates several genes involved in high affinity phosphate uptake%3B under conditions of high phosphate concentrations downregulates the PHO regulon gene gene22 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00115 SH05_RS00120 SH05_00120 SH05_RS00120 23864 24637 - phosphate import ATP-binding protein PstB gene gene23 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00120 SH05_RS00125 SH05_00125 pstA pstA 24820 25710 - phosphate ABC transporter permease Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions gene gene24 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00125 SH05_RS00130 SH05_00130 pstC pstC 25710 26669 - phosphate ABC transporter permease part of the ATP-dependent phosphate uptake system PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions gene gene25 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00130 SH05_RS00135 SH05_00135 SH05_RS00135 26756 27796 - phosphate-binding protein gene gene26 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00135 SH05_RS00140 SH05_00140 SH05_RS00140 28110 29939 - glutamine--fructose-6-phosphate aminotransferase [isomerizing] Catalyzes the first step in hexosamine metabolism%2C converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source gene gene27 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00140 SH05_RS00145 SH05_00145 glmU glmU 30101 31471 - bifunctional protein GlmU forms a homotrimer%3B catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc%3B function in cell wall synthesis gene gene28 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00145 SH05_RS00150 SH05_00150 atpC atpC 31824 32243 - ATP synthase epsilon chain part of catalytic core of ATP synthase%3B alpha(3)beta(3)gamma(1)delta(1)epsilon(1)%3B involved in producing ATP from ADP in the presence of the proton motive force across the membrane gene gene29 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00150 SH05_RS00155 SH05_00155 SH05_RS00155 32264 33646 - ATP synthase subunit beta gene gene30 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00155 SH05_RS00160 SH05_00160 SH05_RS00160 33673 34536 - ATP synthase subunit gamma Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit gene gene31 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00160 SH05_RS00165 SH05_00165 SH05_RS00165 34587 36128 - ATP synthase subunit alpha produces ATP from ADP in the presence of a proton gradient across the membrane%3B the alpha chain is a catalytic subunit gene gene32 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00165 SH05_RS00170 SH05_00170 SH05_RS00170 36141 36674 - ATP synthase subunit delta Produces ATP from ADP in the presence of a proton gradient across the membrane%3B the delta subunit is part of the catalytic core of the ATP synthase complex gene gene33 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00170 SH05_RS00175 SH05_00175 SH05_RS00175 36689 37159 - ATP synthase subunit b Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel. gene gene34 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00175 SH05_RS00180 SH05_00180 SH05_RS00180 37221 37460 - ATP synthase subunit c Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0 gene gene35 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00180 SH05_RS00185 SH05_00185 SH05_RS00185 37507 38322 - ATP synthase subunit a Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0 gene gene36 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00185 SH05_RS00190 SH05_00190 SH05_RS00190 38331 38711 - ATP synthase I Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I associates with the membrane and may be involved with cation translocation gene gene37 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00190 SH05_RS00195 SH05_00195 gidB gidB 39328 39951 - ribosomal RNA small subunit methyltransferase G glucose-inhibited division protein B%3B SAM-dependent methyltransferase%3B methylates the N7 position of guanosine in position 527 of 16S rRNA gene gene38 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00195 SH05_RS00200 SH05_00200 gidA gidA 40015 41904 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GidA%3B glucose-inhibited cell division protein A%3B involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs gene gene39 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00200 SH05_RS00205 SH05_00205 SH05_RS00205 42283 42726 - protein MioC An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group gene gene40 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00205 SH05_RS00210 SH05_00210 SH05_RS00210 42816 43274 - AsnC family transcriptional regulator transcriptional repressor of asnA which codes for aspartate-ammonia ligase gene gene41 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00210 SH05_RS00215 SH05_00215 SH05_RS00215 43426 44418 + aspartate--ammonia ligase catalyzes the formation of asparagine from aspartate and ammonia gene gene42 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00215 SH05_RS00220 SH05_00220 SH05_RS00220 44423 45874 - protein ViaA contains a von Willibrand factor type A domain%3B stimulates the ATPase activity of RavA gene gene43 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00220 SH05_RS00225 SH05_00225 SH05_RS00225 45868 47364 - ATPase RavA interacts with LdcI%2C lysine decarboxylase%3B may be active in late log/ early stationary phase gene gene44 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00225 SH05_RS00230 SH05_00230 trkD trkD 47587 49455 + low affinity potassium transport system protein kup Responsible for the low-affinity transport of potassium into the cell%3B involved in potassium ion uptake under hyper-osmotic stress at a low pH gene gene45 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00230 SH05_RS00235 SH05_00235 SH05_RS00235 49622 50041 + D-ribose pyranase cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose%3B RbsD is required for efficient ribose utilization in E. coli%3B rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source gene gene46 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00235 SH05_RS00240 SH05_00240 SH05_RS00240 50049 51554 + ribose import ATP-binding protein RbsA gene gene47 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00240 SH05_RS00245 SH05_00245 rbsC rbsC 51559 52524 + ribose ABC transporter permease functions to transport ribose at high affinity%3B forms a complex with RbsA2C2B gene gene48 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00245 SH05_RS00250 SH05_00250 SH05_RS00250 52549 53439 + D-ribose-binding periplasmic protein periplasmic substrate-binding component of the ATP-dependent ribose transport system gene gene49 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00250 SH05_RS00255 SH05_00255 SH05_RS00255 53565 54494 + ribokinase catalyzes the formation of D-ribose 5-phosphate from ribose gene gene50 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00255 SH05_RS00260 SH05_00260 SH05_RS00260 54507 55490 + LacI family transcriptional regulator binds to the purF operator and coregulates other genes for de novo purine nucleotide synthesis%3B is involved in regulation of purB%2C purC%2C purEK%2C purHD%2C purL%2C purMN and guaBA expression%3B binds hypoxanthine and guanine as inducers gene gene51 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00260 SH05_RS00265 SH05_00265 SH05_RS00265 55456 56883 - transporter HsrA gene gene52 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00265 SH05_RS00270 SH05_00270 SH05_RS00270 56906 57598 - transcriptional regulator gene gene53 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00270 SH05_RS00275 SH05_00275 SH05_RS00275 58077 59632 + 16S ribosomal RNA rRNA gene54 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00275 SH05_RS00280 SH05_00280 SH05_RS00280 59706 59781 + tRNA-Glu tRNA gene55 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00280 SH05_RS00285 SH05_00285 SH05_RS00285 59966 62890 + 23S ribosomal RNA rRNA gene56 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00285 SH05_RS00290 SH05_00290 SH05_RS00290 62973 63088 + 5S ribosomal RNA rRNA gene57 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00290 SH05_RS00295 SH05_00295 SH05_RS00295 63143 63219 + tRNA-Asp tRNA gene58 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00295 SH05_RS00300 SH05_00300 SH05_RS00300 63228 63303 + tRNA-Trp tRNA gene59 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00300 SH05_RS00305 SH05_00305 SH05_RS00305 63399 64238 - transcriptional regulator Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon gene gene60 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00305 SH05_RS00310 SH05_00310 SH05_RS00310 64357 64695 + hypothetical protein gene gene61 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00310 SH05_RS00315 SH05_00315 SH05_RS00315 64720 66240 - magnesium chelatase and transcriptional regulator among the AAA+ ATPases%2C the YifB protease family belongs to the Helix 2 insert clade%3B unknown function gene gene62 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00315 SH05_RS00320 SH05_00320 SH05_RS00320 66593 66691 + IlvGMEDA operon leader peptide gene gene63 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00320 SH05_RS00325 SH05_RS00325 SH05_RS00325 66831 68475 + acetolactate synthase catalytic subunit catalyzes the formation of 2-acetolactate from pyruvate%3B also known as acetolactate synthase large subunit gene gene64 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00325 SH05_RS00330 SH05_00330 ilvM ilvM 68472 68735 + acetolactate synthase isozyme 2 small subunit gene gene65 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00330 SH05_RS00335 SH05_00335 SH05_RS00335 68755 69684 + branched-chain-amino-acid aminotransferase gene gene66 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00335 SH05_RS00340 SH05_00340 SH05_RS00340 69749 71599 + dihydroxy-acid dehydratase catalyzes the dehydration of 2%2C3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis gene gene67 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00340 SH05_RS00345 SH05_00345 SH05_RS00345 71602 73146 + L-threonine dehydratase biosynthetic IlvA threonine deaminase%3B threonine dehydratase%3B in Escherichia coli%2C IlvA is part of the isoleucine biosynthetic pathway gene gene68 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00345 SH05_RS00350 SH05_00350 SH05_RS00350 73198 74091 - transcriptional regulator participates in controlling several genes involved in isoleucine and valine biosynthesis%3B activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate gene gene69 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00350 SH05_RS00355 SH05_00355 SH05_RS00355 74241 75716 + ketol-acid reductoisomerase catalyzes the formation of (R)-2%2C3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis gene gene70 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00355 SH05_RS00360 SH05_00360 SH05_RS00360 75803 76084 - peptidyl-prolyl cis-trans isomerase rotamase C%3B accelerates isomerization of the peptidyl prolyl bond gene gene71 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00360 SH05_RS00365 SH05_RS00365 SH05_RS00365 76283 76731 - hypothetical protein gene gene72 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00365 SH05_RS00370 SH05_00370 SH05_RS00370 76948 78969 + ATP-dependent DNA helicase Rep single-stranded DNA-dependent ATPase%3B initiates unwinding at a nick in the DNA%3B involved in DNA replication gene gene73 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00370 SH05_RS00375 SH05_00375 SH05_RS00375 79016 80500 - guanosine-5'-triphosphate%2C3'-diphosphate pyrophosphatase catalyzes the conversion of guanosine 5'-triphosphate%2C3'-diphosphate (pppGpp) to guanosine 5'-diphosphate%2C3'-diphosphate (ppGpp)%3B pppGpp and ppGpp control the stringent response during amino acid starvation gene gene74 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00375 SH05_RS00380 SH05_00380 SH05_RS00380 80636 81901 - ATP-dependent RNA helicase RhlB enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome%2C a multi-enzyme complex important in RNA processing and messenger RNA degradation gene gene75 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00380 SH05_RS00385 SH05_00385 trxA trxA 82032 82361 + thioredoxin gene gene76 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00385 SH05_RS00390 SH05_00390 SH05_RS00390 82502 82603 + rho operon leader peptide gene gene77 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00390 SH05_RS00395 SH05_00395 rho rho 82688 83947 + transcription termination factor Rho An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes gene gene78 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00395 SH05_RS00400 SH05_00400 SH05_RS00400 83957 84175 + hypothetical protein gene gene79 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00400 SH05_RS00405 SH05_00405 SH05_RS00405 84187 85290 + undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase catalyzes the formation of alpha-N-acetylglucosaminyl-pyrophosphoryl-undecaprenyl from alpha-N-acetylglucosaminyl 1-phosphate and the lipid carrier undecaprenyl phosphate gene gene80 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00405 SH05_RS00410 SH05_00410 SH05_RS00410 85302 86348 + LPS biosynthesis protein Enterobacterial Common Antigen (ECA) polysaccharide chain length modulation protein gene gene81 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00410 SH05_RS00415 SH05_00415 SH05_RS00415 86449 87534 + UDP-N-acetylglucosamine 2-epimerase gene gene82 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00415 SH05_RS00420 SH05_00420 wecC wecC 87531 88793 + UDP-N-acetyl-D-mannosamine dehydrogenase catalyzes the oxidation of UDP-N-acetyl-D-mannosamine to UDP-N-acetylmannosaminuronic acid gene gene83 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00420 SH05_RS00425 SH05_00425 SH05_RS00425 88793 89860 + dTDP-glucose 4%2C6-dehydratase gene gene84 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00425 SH05_RS00430 SH05_00430 SH05_RS00430 89879 90760 + glucose-1-phosphate thymidylyltransferase 2 gene gene85 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00430 SH05_RS00435 SH05_00435 SH05_RS00435 90738 91412 + dTDP-fucosamine acetyltransferase gene gene86 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00435 SH05_RS00440 SH05_00440 SH05_RS00440 91417 92547 + dTDP-4-amino-4%2C6-dideoxygalactose aminotransferase catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis gene gene87 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00440 SH05_RS00445 SH05_00445 SH05_RS00445 92549 93799 + protein WzxE involved in the movement of lipid III across the membrane gene gene88 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00445 SH05_RS00450 SH05_00450 SH05_RS00450 93796 94875 + TDP-N-acetylfucosamine--lipid II N-acetylfucosaminyltransferase catalyzes the synthesis of a lipid-linked intermediate involved in ECA synthesis gene gene89 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00450 SH05_RS00455 SH05_00455 SH05_RS00455 94872 96224 + ECA polysaccharide chain elongation protein enterobacterial common antigen polymerase gene gene90 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00455 SH05_RS00460 SH05_00460 SH05_RS00460 96227 96967 + UDP-N-acetyl-D-mannosaminuronic acid transferase gene gene91 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00460 SH05_RS00465 SH05_00465 SH05_RS00465 97158 98543 + transporter involved in the transport across the cytoplasmic membrane of D-alanine%2C D-serine and glycine gene gene92 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00465 SH05_RS00470 SH05_00470 SH05_RS00470 98646 98722 + tRNA-Arg tRNA gene93 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00470 SH05_RS00475 SH05_00475 SH05_RS00475 98781 98856 + tRNA-His tRNA gene94 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00475 SH05_RS00480 SH05_00480 SH05_RS00480 98877 98963 + tRNA-Leu tRNA gene95 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00480 SH05_RS00485 SH05_00485 SH05_RS00485 99006 99082 + tRNA-Pro tRNA gene96 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00485 SH05_RS00490 SH05_00490 SH05_RS00490 99229 100464 + anaerobic sulfatase maturase AslB gene gene97 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00490 SH05_RS00495 SH05_00495 SH05_RS00495 100623 102278 - arylsulfatase gene gene98 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00495 SH05_RS00500 SH05_00500 SH05_RS00500 102957 104153 - heme biosynthesis protein HemY gene gene99 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00500 SH05_RS00505 SH05_00505 SH05_RS00505 104156 105337 - heme biosynthesis operon protein HemX gene gene100 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00505 SH05_RS00510 SH05_00510 hemD hemD 105359 106099 - uroporphyrinogen III methyltransferase catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane%3B functions in tetrapyrrole and heme biosynthesis gene gene101 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00510 SH05_RS00515 SH05_00515 hemC hemC 106096 107037 - porphobilinogen deaminase transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis gene gene102 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00515 SH05_RS00520 SH05_00520 cyaA cyaA 107424 109970 + adenylate cyclase catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP gene gene103 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00520 SH05_RS00525 SH05_00525 cyaY cyaY 110010 110330 - protein CyaY iron-dependent inhibitor of iron-sulfur cluster formation%3B iron-binding and oxidizing protein%3B defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease%3B based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly gene gene104 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00525 SH05_RS00530 SH05_00530 SH05_RS00530 110793 110996 + membrane protein gene gene105 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00530 SH05_RS00535 SH05_00535 dapF dapF 111033 111857 + diaminopimelate epimerase involved in lysine biosynthesis%3B DAP epimerase%3B produces DL-diaminopimelate from LL-diaminopimelate gene gene106 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00535 SH05_RS00540 SH05_00540 SH05_RS00540 111854 112561 + DUF484 domain-containing protein gene gene107 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00540 SH05_RS00545 SH05_00545 xerC xerC 112558 113454 + tyrosine recombinase XerC site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs gene gene108 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00545 SH05_RS00550 SH05_00550 SH05_RS00550 113454 114170 + flavin mononucleotide phosphatase YigB YigB%3B member of the haloacid dehalogenase (HAD)-like hydrolases superfamily of protein%3B unknown function gene gene109 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00550 SH05_RS00555 SH05_00555 uvrD uvrD 114254 116416 + DNA helicase II unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present%3B involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair. gene gene110 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00555 SH05_RS00560 SH05_00560 SH05_RS00560 116563 117327 - DUF2233 domain-containing protein gene gene111 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00560 SH05_RS00565 SH05_00565 SH05_RS00565 117340 117453 + hypothetical protein gene gene112 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00565 SH05_RS00570 SH05_00570 SH05_RS00570 117697 118647 + magnesium transporter CorA responsible for the influx of magnesium ions gene gene113 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00570 SH05_RS00575 SH05_00575 SH05_RS00575 118690 119070 - DUF2628 domain-containing protein gene gene114 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00575 SH05_RS00580 SH05_00580 SH05_RS00580 119084 119464 - hypothetical protein gene gene115 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00580 SH05_RS00585 SH05_00585 SH05_RS00585 119559 120449 - protein RarD gene gene116 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00585 SH05_RS00590 SH05_00590 SH05_RS00590 120501 120968 - hypothetical protein gene gene117 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00590 SH05_RS00595 SH05_00595 SH05_RS00595 121133 122002 + phospholipase A1 catalyzes the hydrolysis of phosphatidylcholine gene gene118 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00595 SH05_RS00600 SH05_00600 SH05_RS00600 122135 123964 + ATP-dependent DNA helicase RecQ functions in blocking illegitimate recombination%2C enhancing topoisomerase activity%2C initiating SOS signaling and clearing blocked replication forks%3B component of the RecF recombinational pathway gene gene119 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00600 SH05_RS00605 SH05_00605 SH05_RS00605 124028 124648 + threonine efflux protein gene gene120 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00605 SH05_RS00610 SH05_00610 rhtB rhtB 124710 125330 - homoserine/homoserine lactone efflux protein gene gene121 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00610 SH05_RS00615 SH05_00615 SH05_RS00615 125441 126463 + lysophospholipase L2 lecithinase B%3B catalyzes the conversion of 1-lysophosphatidylcholine to glycerophosphocholine%3B can also hydrolyze 2-acyl glycerophosphoethanolamine and other substrates gene gene122 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00615 SH05_RS00620 SH05_00620 SH05_RS00620 126471 127271 + pyridoxal phosphate phosphatase YigL gene gene123 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00620 SH05_RS00625 SH05_00625 SH05_RS00625 127347 128246 + EamA-like transporter gene gene124 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00625 SH05_RS00630 SH05_00630 SH05_RS00630 128134 129087 - transcriptional regulator homocysteine-binding%3B positive regulator of metA%2C metE and metH gene gene125 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00630 SH05_RS00635 SH05_00635 SH05_RS00635 129324 131585 + 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase gene gene126 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00635 SH05_RS00640 SH05_00640 SH05_RS00640 131625 132440 - carboxymethylenebutenolidase gene gene127 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00640 SH05_RS00645 SH05_00645 SH05_RS00645 132702 133463 + uridine phosphorylase catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate%3B involved in the pyrimidine salvage pathway gene gene128 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00645 SH05_RS00650 SH05_00650 SH05_RS00650 133604 135031 + DNA recombination protein RmuC YigN%3B nuclease that may cleave DNA structures arising during the recombination of short-inverted repeats and thereby prevents the inversion of the internal sequence%3B transcription is induced by DNA-damaging agents such as nalidixic acid or mitomycin C in a LexA-dependent manner gene gene129 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00650 SH05_RS00655 SH05_00655 ubiE ubiE 135126 135881 + ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone and menaquinone gene gene130 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00655 SH05_RS00660 SH05_00660 SH05_RS00660 135895 136500 + ubiquinone biosynthesis protein UbiJ gene gene131 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00660 SH05_RS00665 SH05_00665 ubiB ubiB 136497 138137 + hypothetical protein an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone%3B functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis%3B similar to eukaryotic proteins that exhibit kinase functions gene gene132 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00665 SH05_RS00670 SH05_00670 tatA tatA 138216 138485 + protein translocase TatA TatA%3B similar to TatE that is found in some proteobacteria%3B part of system that translocates proteins with a conserved twin arginine motif across the inner membrane%3B capable of translocating folded substrates typically those with bound cofactors%3B similar to a protein import system in thylakoid membranes gene gene133 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00670 SH05_RS00675 SH05_00675 SH05_RS00675 138489 139004 + Sec-independent protein translocase TatB mediates the export of protein precursors bearing twin-arginine signal peptides gene gene134 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00675 SH05_RS00680 SH05_00680 SH05_RS00680 139007 139783 + preprotein translocase subunit TatC with TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane gene gene135 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00680 SH05_RS00685 SH05_00685 SH05_RS00685 139825 140607 + Tat-linked quality control protein TatD magnesium dependent%3B involved in quality control of mutated Tat exported substrates%3B not involved in the Sec-independent protein export system gene gene136 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00685 SH05_RS00690 SH05_00690 rfaH rfaH 140604 141092 - transcription antitermination protein RfaH gene gene137 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00690 SH05_RS00695 SH05_00695 SH05_RS00695 141259 142752 + 3-octaprenyl-4-hydroxybenzoate carboxy-lyase catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol gene gene138 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00695 SH05_RS00700 SH05_00700 fre fre 142798 143499 + NAD(P)H-flavin reductase NAD(P)H-flavin reductase%3B catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide%3B in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin gene gene139 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00700 SH05_RS00705 SH05_00705 fadA fadA 143880 145043 - 3-ketoacyl-CoA thiolase FadA%3B fatty acid oxidation complex component beta%3B functions in a heterotetramer with FadB%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids gene gene140 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00705 SH05_RS00710 SH05_00710 fadB fadB 145053 147242 - fatty acid oxidation complex subunit alpha includes enoyl-CoA hydratase%2C delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase%2C 3-hydroxyacyl-CoA dehydrogenase%2C and 3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities%3B forms a heterotetramer with FadA%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids gene gene141 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00710 SH05_RS00715 SH05_00715 SH05_RS00715 147432 148763 + Xaa-Pro dipeptidase catalyzes the hydrolysis of dipeptides with a proline at the C-terminal%3B also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters gene gene142 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00715 SH05_RS00720 SH05_00720 SH05_RS00720 148763 149377 + IMPACT family member YigZ gene gene143 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00720 SH05_RS00725 SH05_00725 SH05_RS00725 149416 150867 + trk system potassium uptake protein trkH gene gene144 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00725 SH05_RS00730 SH05_00730 hemG hemG 150879 151424 + protoporphyrinogen IX dehydrogenase [menaquinone] catalyzes the oxidation of protoporphyrinogen IX to form protoporphyrin IX gene gene145 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00730 SH05_RS00735 SH05_00735 SH05_RS00735 151800 153355 + 16S ribosomal RNA rRNA gene146 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00735 SH05_RS00740 SH05_00740 SH05_RS00740 153412 153488 + tRNA-Ile tRNA gene147 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00740 SH05_RS00745 SH05_00745 SH05_RS00745 153531 153606 + tRNA-Ala tRNA gene148 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00745 SH05_RS00750 SH05_00750 SH05_RS00750 153781 156712 + 23S ribosomal RNA rRNA gene149 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00750 SH05_RS00755 SH05_00755 SH05_RS00755 156790 156905 + 5S ribosomal RNA rRNA gene150 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00755 SH05_RS00760 SH05_00760 SH05_RS00760 157177 157704 - molybdopterin-guanine dinucleotide biosynthesis adapter protein in Escherichia coli the MobB protein is not essential but has been found to interact with multiple proteins involved in the molybdopterin guanine dinucleotide cofactor biosynthesis pathway gene gene151 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00760 SH05_RS00765 SH05_00765 mobA mobA 157686 158270 - molybdenum cofactor guanylyltransferase in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis gene gene152 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00765 SH05_RS00770 SH05_00770 SH05_RS00770 158340 158609 + hypothetical protein gene gene153 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00770 SH05_RS00775 SH05_00775 SH05_RS00775 158686 159672 + protein RdoA catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro%3B specific substrate in vivo has not been identified yet%3B plays a role in long-term cell survival and expression of surface appendages gene gene154 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00775 SH05_RS00780 SH05_00780 SH05_RS00780 159689 160315 + thiol:disulfide interchange protein DsbA gene gene155 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00780 SH05_RS00785 SH05_00785 SH05_RS00785 160470 161900 + DUF945 domain-containing protein gene gene156 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00785 SH05_RS00790 SH05_00790 SH05_RS00790 161941 162873 - acyltransferase gene gene157 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00790 SH05_RS00795 SH05_00795 SH05_RS00795 162993 163235 - hypothetical protein gene gene158 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00795 SH05_RS00800 SH05_00800 SH05_RS00800 163237 166023 + DNA polymerase I gene gene159 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00800 SH05_RS00805 SH05_00805 SH05_RS00805 166404 167036 - GTP-binding protein gene gene160 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00805 SH05_RS00810 SH05_00810 SH05_RS00810 167618 168127 + der GTPase-activating protein YihI gene gene161 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00810 SH05_RS00815 SH05_00815 SH05_RS00815 168316 169689 + coproporphyrinogen III oxidase catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III gene gene162 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00815 SH05_RS00820 SH05_00820 SH05_RS00820 169918 170028 - hypothetical protein gene gene163 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00820 SH05_RS00825 SH05_00825 glnG glnG 170140 171549 - nitrogen regulation protein NR(I) response regulator of a two-component regulatory system involved in the activation of nitrogen assimilation genes%3B interacts with sigma-54 gene gene164 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00825 SH05_RS00830 SH05_00830 glnL glnL 171561 172610 - PAS domain-containing two-component system sensor histidine kinase sensory histidine kinase in two-component regulatory system with GlnG%3B acts as a signal transducer which responds to the nitrogen level of cell and modulates the activity of ntrC by phosphorylation/dephosphorylation gene gene165 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00830 SH05_RS00835 SH05_00835 glnA glnA 172896 174305 - glutamine synthetase forms a homododecamer%3B forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate%3B also functions in the assimilation of ammonia%3B highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues%3B addition of adenylyl groups results in inactivation of the enzyme gene gene166 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00835 SH05_RS00840 SH05_00840 SH05_RS00840 174284 174517 - hypothetical protein gene gene167 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00840 SH05_RS00845 SH05_00845 SH05_RS00845 174678 176501 + GTP-binding protein gene gene168 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00845 SH05_RS00850 SH05_00850 SH05_RS00850 176718 177428 + transcriptional regulator gene gene169 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00850 SH05_RS00855 SH05_00855 SH05_RS00855 177436 178416 + sugar phosphate isomerase gene gene170 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00855 SH05_RS00860 SH05_00860 SH05_RS00860 178518 179783 + hypothetical protein gene gene171 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00860 SH05_RS00865 SH05_00865 ompL ompL 179874 180566 - porin porin involved in the transport of small molecular weight solutes (up to 600 Daltons) across the cell wall%3B specific substrate still unknown gene gene172 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00865 SH05_RS00870 SH05_00870 SH05_RS00870 180634 182037 - sulfoquinovose importer gene gene173 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00870 SH05_RS00875 SH05_00875 SH05_RS00875 182080 183465 - 2%2C3-dihydroxypropane-1-sulfonate exporter gene gene174 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00875 SH05_RS00880 SH05_00880 SH05_RS00880 183511 185547 - alpha-glucosidase YihQ gene gene175 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00880 SH05_RS00885 SH05_00885 SH05_RS00885 185746 186648 - aldose-1-epimerase gene gene176 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00885 SH05_RS00890 SH05_00890 SH05_RS00890 186786 188027 - sulfoquinovose isomerase gene gene177 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00890 SH05_RS00895 SH05_00895 SH05_RS00895 188044 188922 - sulfofructosephosphate aldolase gene gene178 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00895 SH05_RS00900 SH05_00900 SH05_RS00900 188946 189842 - 3-sulfolactaldehyde reductase catalyzes the formation of gamma hydroxybutyrate from succinate semialdehyde gene gene179 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00900 SH05_RS00905 SH05_00905 SH05_RS00905 190010 190906 + sulfofructose kinase gene gene180 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00905 SH05_RS00910 SH05_00910 SH05_RS00910 190940 191725 + DeoR family transcriptional regulator gene gene181 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00910 SH05_RS00915 SH05_00915 SH05_RS00915 191824 192423 + alpha-D-glucose-1-phosphate phosphatase YihX gene gene182 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00915 SH05_RS00920 SH05_00920 SH05_RS00920 192417 193289 + membrane protein gene gene183 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00920 SH05_RS00925 SH05_00925 SH05_RS00925 193286 193723 + D-aminoacyl-tRNA deacylase hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr)%3B possible defense mechanism against a harmful effect of D-tyrosine gene gene184 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00925 SH05_RS00930 SH05_00930 SH05_RS00930 193768 194709 + hypothetical protein gene gene185 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00930 SH05_RS00935 SH05_00935 SH05_RS00935 195562 195780 + hypothetical protein gene gene186 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00935 SH05_RS00940 SH05_00940 SH05_RS00940 195998 196240 + hypothetical protein gene gene187 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00940 SH05_RS00945 SH05_00945 SH05_RS00945 196256 196405 - hypothetical protein gene gene188 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00945 SH05_RS00950 SH05_00950 SH05_RS00950 196570 197499 - protein FdhE required for the formation of active formate dehydrogenase gene gene189 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00950 SH05_RS00955 SH05_00955 SH05_RS00955 197496 198131 - formate dehydrogenase cytochrome b556(fdo) subunit cytochrome b556(FDO) component%3B heme containing gene gene190 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00955 SH05_RS00960 SH05_00960 SH05_RS00960 198128 199030 - formate dehydrogenase-O iron-sulfur subunit beta subunit%3B involved in the use of formate as an electron donor during aerobic respiration%3B acts to transfer electrons from the major(alpha subunit) to the cytochrome b556(gamma subunit) gene gene191 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00960 SH05_RS00965 SH05_00965 SH05_RS00965 199043 201457 - formate dehydrogenase subunit alpha gene gene192 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00965 SH05_RS00970 SH05_00970 SH05_RS00970 201506 202093 - sulfate ABC transporter substrate-binding protein gene gene193 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00970 SH05_RS00975 SH05_00975 SH05_RS00975 202287 203120 + protein FdhD involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth gene gene194 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00975 SH05_RS00980 SH05_00980 SH05_RS00980 203273 204328 + DUF3829 domain-containing protein gene gene195 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00980 SH05_RS00985 SH05_00985 SH05_RS00985 204378 206126 - frv operon regulator%3B contains a PTS EIIA domain repressor of the frv operon%2C involved in phosphoenolpyruvate:sugar phosphotransferase system gene gene196 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00985 SH05_RS00990 SH05_00990 SH05_RS00990 206126 207196 - peptidase gene gene197 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00990 SH05_RS00995 SH05_00995 SH05_RS00995 207186 208637 - fructose-like PTS system EIIBC component gene gene198 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS00995 SH05_RS01000 SH05_01000 SH05_RS01000 208648 209094 - fructose-like phosphotransferase enzyme IIA component with FrvBRX is part of the phosphoenolpyruvate-dependent sugar phosphotransferase system involved in the transport and phosphorylation of sugars%3B possibly responsible for the sugar specificity of the system gene gene199 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01000 SH05_RS01005 SH05_01005 SH05_RS01005 209395 209709 - L-rhamnose mutarotase gene gene200 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01005 SH05_RS01010 SH05_01010 SH05_RS01010 209719 210543 - rhamnulose-1-phosphate aldolase gene gene201 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01010 SH05_RS01015 SH05_01015 SH05_RS01015 210994 212253 - L-rhamnose isomerase catalyzes the formation of L-rhamnulose from L-rhamnose gene gene202 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01015 SH05_RS01020 SH05_01020 rhaB rhaB 212250 213719 - rhamnulokinase catalyzes the ATP-dependent phosphorylation of rhamnulose gene gene203 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01020 SH05_RS01025 SH05_01025 SH05_RS01025 213798 213947 + hypothetical protein gene gene204 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01025 SH05_RS01030 SH05_01030 SH05_RS01030 214007 214843 + transcriptional activator RhaS gene gene205 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01030 SH05_RS01035 SH05_01035 SH05_RS01035 214917 215765 + HTH-type transcriptional activator RhaR activates the expression of rhaRS in response to L-rhamnose gene gene206 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01035 SH05_RS01040 SH05_01040 SH05_RS01040 215762 216796 - l-rhamnose-proton symporter transports L-rhamnose and L-lyxose into the cell gene gene207 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01040 SH05_RS01045 SH05_01045 SH05_RS01045 217081 217701 + superoxide dismutase [Mn] SodA%3B manganese binding%3B only present under aerobic conditions%3B destroys free radicals gene gene208 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01045 SH05_RS01050 SH05_01050 SH05_RS01050 217742 217858 - hypothetical protein gene gene209 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01050 SH05_RS01055 SH05_01055 SH05_RS01055 217961 218944 + 2-keto-3-deoxygluconate permease transports degraded pectin products into the bacterial cell gene gene210 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01055 SH05_RS01060 SH05_01060 SH05_RS01060 219093 219767 + hypothetical protein gene gene211 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01060 SH05_RS01065 SH05_01065 cpxA cpxA 219873 221246 - two-component system sensor histidine kinase part of two-component CpxA/CpxR system%3B senses envelope stress%3B upregulates a number of periplasmic folding and trafficking factors gene gene212 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01065 SH05_RS01070 SH05_01070 SH05_RS01070 221243 221941 - two-component system response regulator response regulator in two-component regulatory system with CpxA%3B part of the envelope stress response system gene gene213 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01070 SH05_RS01075 SH05_01075 cpxP cpxP 222091 222591 + periplasmic protein CpxP repressor of the Cpx envelope stress response pathway which occurs via periplasmic interactions with CpxA%3B CpxP is degraded by DegP protease especially in the presence of misfolded substrates gene gene214 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01075 SH05_RS01080 SH05_01080 fieF fieF 222740 223642 + ferrous iron and zinc transporter member of cation diffusion facilitator family%3B CDF%3B membrane-bound%3B induced by both zinc and iron%2C but does not induce resistance to zinc%3B can transport zinc(II) in a proton-dependent manner%3B instead this protein induces iron resistance%3B forms dimers gene gene215 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01080 SH05_RS01085 SH05_01085 SH05_RS01085 223823 224785 + ATP-dependent 6-phosphofructokinase catalyzes the formation of D-fructose 1%2C6-bisphosphate from D-fructose 6-phosphate in glycolysis gene gene216 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01085 SH05_RS01090 SH05_01090 SH05_RS01090 225105 226094 + sulfate-binding protein gene gene217 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01090 SH05_RS01095 SH05_01095 SH05_RS01095 226201 226956 + CDP-diacylglycerol pyrophosphatase gene gene218 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01095 SH05_RS01100 SH05_01100 SH05_RS01100 227011 227778 - triosephosphate isomerase Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate gene gene219 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01100 SH05_RS01105 SH05_01105 SH05_RS01105 227886 228485 - DUF1454 domain-containing protein gene gene220 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01105 SH05_RS01110 SH05_01110 SH05_RS01110 228586 229026 + membrane protein gene gene221 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01110 SH05_RS01115 SH05_01115 SH05_RS01115 229238 229537 + hypothetical protein gene gene222 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01115 SH05_RS01120 SH05_01120 SH05_RS01120 229564 229992 + universal stress protein D with UspC and Usp E is involved in resistance to UV radiation gene gene223 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01120 SH05_RS01125 SH05_01125 SH05_RS01125 229997 230743 - ferredoxin--NADP reductase gene gene224 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01125 SH05_RS01130 SH05_01130 SH05_RS01130 230840 231850 - fructose 1%2C6-bisphosphatase gene gene225 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01130 SH05_RS01135 SH05_01135 glpK glpK 231985 233493 - glycerol kinase Converts glycerol and ADP to glycerol-3-phosphate and ADP gene gene226 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01135 SH05_RS01140 SH05_01140 SH05_RS01140 233516 234361 - glycerol uptake facilitator protein involved in the transport of glycerol into the cell gene gene227 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01140 SH05_RS01145 SH05_01145 SH05_RS01145 234792 235031 + cell division protein ZapB interacts with FisZ and is necessary for Z-ring formation gene gene228 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01145 SH05_RS01150 SH05_01150 SH05_RS01150 235116 235601 - ribonuclease E activity regulator RraA regulator of RNase E%3B increases half-life and abundance of RNAs%3B interacts with RNase E possibly inhibiting catalytic activity gene gene229 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01150 SH05_RS01155 SH05_01155 SH05_RS01155 235694 236620 - 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase catalyzes the formation of dimethylmenaquinone from 1%2C4-dihydroxy-2-naphthoate and octaprenyl diphosphate gene gene230 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01155 SH05_RS01160 SH05_01160 hslU hslU 236687 238018 - ATP-dependent protease ATPase subunit HslU heat shock protein involved in degradation of misfolded proteins gene gene231 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01160 SH05_RS01165 SH05_01165 SH05_RS01165 238028 238558 - ATP-dependent protease subunit HslV gene gene232 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01165 SH05_RS01170 SH05_01170 SH05_RS01170 238651 239505 - cell division protein FtsN gene gene233 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01170 SH05_RS01175 SH05_01175 SH05_RS01175 239702 240727 - transcriptional regulator negatively controls the transcription initiation of genes such as deoCABD%2C udp%2C and cdd encoding catabolizing enzymes and nupC%2C nupG%2C and tsx encoding transporting and pore-forming proteins gene gene234 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01175 SH05_RS01180 SH05_01180 SH05_RS01180 240883 243081 - primosomal protein N' binding of PriA to forked DNA starts the assembly of the primosome%2C also possesses 3'-5' helicase activity gene gene235 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01180 SH05_RS01185 SH05_01185 rpmE rpmE 243284 243496 + 50S ribosomal protein L31 RpmE%3B there appears to be two types of ribosomal proteins L31 in bacterial genomes%3B some contain a CxxC motif while others do not%3B Bacillus subtilis has both types%3B the proteins in this cluster have the CXXC motif%3B RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth%3B expression of ytiA is controlled by a zinc-specific transcriptional repressor%3B RpmE contains one zinc ion and a CxxC motif is responsible for this binding%3B forms an RNP particle along with proteins L5%2C L18%2C and L25 and 5S rRNA%3B found crosslinked to L2 and L25 and EF-G%3B may be near the peptidyltransferase site of the 50S ribosome gene gene236 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01185 SH05_RS01190 SH05_01190 SH05_RS01190 243557 244165 - lipid binding hydrolase DUF830 family protein gene gene237 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01190 SH05_RS01195 SH05_01195 SH05_RS01195 244349 244666 - met repressor when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis gene gene238 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01195 SH05_RS01200 SH05_RS01200 SH05_RS01200 244943 246101 + cystathionine gamma-synthase catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine gene gene239 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01200 SH05_RS01205 SH05_01205 metL metL 246104 248536 + bifunctional aspartokinase/homoserine dehydrogenase 2 multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways gene gene240 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01205 SH05_RS01210 SH05_01210 SH05_RS01210 248675 248809 - hypothetical protein gene gene241 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01210 SH05_RS01215 SH05_01215 metF metF 248885 249775 + 5%2C10-methylenetetrahydrofolate reductase MTHFR%3B catalyzes NADH-linked reduction of 5%2C10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor gene gene242 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01215 SH05_RS01220 SH05_01220 SH05_RS01220 250104 252284 + catalase-peroxidase gene gene243 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01220 SH05_RS01225 SH05_01225 SH05_RS01225 252377 253282 + permease gene gene244 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01225 SH05_RS01230 SH05_01230 SH05_RS01230 253309 253926 - DUF1287 domain-containing protein gene gene245 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01230 SH05_RS01235 SH05_01235 SH05_RS01235 254038 254157 - hypothetical protein gene gene246 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01235 SH05_RS01240 SH05_01240 gldA gldA 254201 255304 - glycerol dehydrogenase forms dimers and octamers%3B involved in conversion of glycerol to dihydroxy-acetone gene gene247 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01240 SH05_RS01245 SH05_01245 SH05_RS01245 255315 255977 - fructose-6-phosphate aldolase 2 similar to transaldolase from Escherichia coli%3B many organisms have multiple copies gene gene248 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01245 SH05_RS01250 SH05_01250 SH05_RS01250 255989 258490 - multiphosphoryl transfer protein 2 Phosphotransferase system%2C enzyme I%3B transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein HPr%3B HPr transfers the phosphoryl group to subunit A%3B subunit IIA transfers a phosphoryl group to subunit IIB%3B subunit IIB transfers the phosphoryl group to the substrate%3B part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%2C a major carbohydrate active-transport system gene gene249 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01250 SH05_RS01255 SH05_01255 SH05_RS01255 258799 259878 + fructose-like permease IIC component 2 gene gene250 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01255 SH05_RS01260 SH05_01260 SH05_RS01260 259893 260213 + fructose-like phosphotransferase enzyme IIB component 2 FrwB with FrwC%2C FrwD and PtsA forms a PEP-dependent sugar phosphotransferase system (PTS) permease which may phosphorylate and transport sugars into the cell%3B cytoplasmic protein that interacts with complex EIIA%3B contains the second phosphorylation site of the PTS gene gene251 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01260 SH05_RS01265 SH05_01265 pflD pflD 260264 262561 + formate acetyltransferase 2 involved in production of D-lactate from glucose under microaerobic conditions%3B cytoplasmic protein gene gene252 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01265 SH05_RS01270 SH05_01270 SH05_RS01270 262527 263405 + pyruvate formate-lyase 2-activating enzyme gene gene253 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01270 SH05_RS01275 SH05_01275 SH05_RS01275 263407 263748 + fructose-like phosphotransferase enzyme IIB component 3 FrwD with FrwB%2C FrwC and PtsA forms a PEP-dependent sugar phosphotransferase system permease which may phosphorylate and transport sugars into the cell%3B phosphorylated by EIIA%3B FrwB homolog gene gene254 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01275 SH05_RS01280 SH05_01280 SH05_RS01280 263735 264586 - AraC family transcriptional regulator gene gene255 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01280 SH05_RS01285 SH05_01285 SH05_RS01285 264801 266534 - phosphoethanolamine transferase EptC gene gene256 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01285 SH05_RS01290 SH05_01290 SH05_RS01290 266716 269367 - phosphoenolpyruvate carboxylase catalyzes the formation of oxaloacetate from phosphoenolpyruvate gene gene257 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01290 SH05_RS01295 SH05_01295 SH05_RS01295 269585 269977 - hypothetical protein gene gene258 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01295 SH05_RS01300 SH05_01300 SH05_RS01300 269965 271116 - acetylornithine deacetylase catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis gene gene259 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01300 SH05_RS01305 SH05_01305 SH05_RS01305 271270 272274 + N-acetyl-gamma-glutamyl-phosphate reductase gene gene260 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01305 SH05_RS01310 SH05_01310 SH05_RS01310 272285 273058 + acetylglutamate kinase gene gene261 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01310 SH05_RS01315 SH05_01315 SH05_RS01315 273119 274492 + argininosuccinate lyase catalyzes the formation of arginine from (N-L-arginino)succinate gene gene262 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01315 SH05_RS01320 SH05_01320 SH05_RS01320 274759 275676 + hydrogen peroxide-inducible genes activator Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG%2C gor%2C ahpC%2C ahpF%2C oxyS%2C dps%2C fur and grxA gene gene263 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01320 SH05_RS01325 SH05_01325 SH05_RS01325 275659 277059 - soluble pyridine nucleotide transhydrogenase catalyzes the conversion of NADPH to NADH gene gene264 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01325 SH05_RS01330 SH05_01330 SH05_RS01330 277393 278040 + transcriptional regulator negatively controls the expression of fabA and fabB%2C genes involved in the unsaturated fatty acid biosynthesis gene gene265 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01330 SH05_RS01335 SH05_01335 SH05_RS01335 278040 278399 + hypothetical protein gene gene266 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01335 SH05_RS01340 SH05_01340 SH05_RS01340 278439 279539 - tRNA/tmRNA (uracil-C(5))-methyltransferase catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs gene gene267 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01340 SH05_RS01345 SH05_01345 btuB btuB 279908 281752 + vitamin B12 transporter BtuB involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space gene gene268 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01345 SH05_RS01350 SH05_01350 SH05_RS01350 281766 282554 + glutamate racemase converts L-glutamate to D-glutamate%2C a component of peptidoglycan gene gene269 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01350 SH05_RS01355 SH05_01355 SH05_RS01355 282926 284481 + 16S ribosomal RNA rRNA gene270 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01355 SH05_RS01360 SH05_01360 SH05_RS01360 284555 284630 + tRNA-Glu tRNA gene271 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01360 SH05_RS01365 SH05_01365 SH05_RS01365 284815 287742 + 23S ribosomal RNA rRNA gene272 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01365 SH05_RS01370 SH05_01370 SH05_RS01370 287820 287935 + 5S ribosomal RNA rRNA gene273 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01370 SH05_RS01375 SH05_01375 murB murB 288238 289266 + UDP-N-acetylenolpyruvoylglucosamine reductase catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis gene gene274 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01375 SH05_RS01380 SH05_01380 SH05_RS01380 289263 290228 + bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor catalyzes the formation of biotinyl-5'-AMP%2C also acts as a transcriptional repressor of the biotin operon gene gene275 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01380 SH05_RS01385 SH05_01385 SH05_RS01385 290257 291213 - type I pantothenate kinase gene gene276 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01385 SH05_RS01390 SH05_01390 SH05_RS01390 291394 291549 - hypothetical protein gene gene277 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01390 SH05_RS01395 SH05_01395 SH05_RS01395 291569 291644 + tRNA-Thr tRNA gene278 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01395 SH05_RS01400 SH05_01400 SH05_RS01400 291653 291737 + tRNA-Tyr tRNA gene279 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01400 SH05_RS01405 SH05_01405 SH05_RS01405 291854 291928 + tRNA-Gly tRNA gene280 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01405 SH05_RS01410 SH05_01410 SH05_RS01410 291935 292010 + tRNA-Thr tRNA gene281 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01410 SH05_RS01415 SH05_01415 tuf tuf 292125 293309 + translation elongation factor EF-Tu 2 EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu gene gene282 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01415 SH05_RS01420 SH05_01420 secE secE 293539 293922 + protein translocase subunit SecE forms a complex with SecY and SecG%3B SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane%2C a process driven by ATP and a proton-motive force gene gene283 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01420 SH05_RS01425 SH05_01425 nusG nusG 293924 294469 + transcription termination/antitermination protein NusG Modulates Rho-dependent transcription termination gene gene284 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01425 SH05_RS01430 SH05_01430 SH05_RS01430 294628 295056 + 50S ribosomal protein L11 gene gene285 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01430 SH05_RS01435 SH05_01435 SH05_RS01435 295060 295764 + 50S ribosomal protein L1 gene gene286 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01435 SH05_RS01440 SH05_01440 rplJ rplJ 296177 296674 + 50S ribosomal protein L10 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit gene gene287 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01440 SH05_RS01445 SH05_01445 rplL rplL 296741 297106 + 50S ribosomal protein L7/L12 present in two forms%3B L12 is normal%2C while L7 is aminoacylated at the N-terminal serine%3B the only multicopy ribosomal protein%3B 4:1 ratio of L7/L12 per ribosome%3B two L12 dimers bind L10%3B critically important for translation efficiency and fidelity%3B stimulates GTPase activity of translation factors gene gene288 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01445 SH05_RS01450 SH05_01450 rpoB rpoB 297426 301454 + DNA-directed RNA polymerase subunit beta DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates%3B beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme gene gene289 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01450 SH05_RS01455 SH05_01455 SH05_RS01455 301531 305754 + DNA-directed RNA polymerase subunit beta' DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter gene gene290 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01455 SH05_RS01460 SH05_01460 SH05_RS01460 305967 306506 + heat-shock protein C gene gene291 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01460 SH05_RS01465 SH05_01465 thiH thiH 306916 308049 - 2-iminoacetate synthase in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS%3B with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine%2C cysteine and 1-deoxy-D-xylulose-5-phosphate%3B forms a complex with ThiG%3B contains an iron-sulfur center gene gene292 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01465 SH05_RS01470 SH05_01470 SH05_RS01470 308046 308816 - thiazole synthase gene gene293 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01470 SH05_RS01475 SH05_01475 SH05_RS01475 308818 309018 - thiamine biosynthesis protein ThiS with ThiF%2C ThiG%2C and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate gene gene294 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01475 SH05_RS01480 SH05_01480 SH05_RS01480 309002 309757 - thiamine biosynthesis protein ThiS ATP-dependent adenylate transferase%2C transfers adenyl moiety to the MoeD subunit of molybdopterin synthase gene gene295 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01480 SH05_RS01485 SH05_01485 SH05_RS01485 309750 310385 - thiamine-phosphate synthase catalyzes the formation of thiamine monophosphate from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate gene gene296 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01485 SH05_RS01490 SH05_01490 SH05_RS01490 310385 312280 - phosphomethylpyrimidine synthase catalyzes the formation of 4-amino-2-methyl-5-phosphomethylpyrimidine from 5-amino-1-(5-phospho-D-ribosyl)imidazole and S-adenosyl-L-methionine in thiamine biosynthesis gene gene297 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01490 SH05_RS01495 SH05_01495 SH05_RS01495 312513 312989 - regulator of sigma D binds specifically to the major sigma factor sigma 70%3B active in stationary phase gene gene298 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01495 SH05_RS01500 SH05_01500 nudC nudC 313084 313857 + NADH pyrophosphatase can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH%3B requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates gene gene299 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01500 SH05_RS01505 SH05_01505 hemE hemE 313897 314961 + uroporphyrinogen decarboxylase catalyzes the formation of coproporphyrinogen from uroporphyrinogen III gene gene300 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01505 SH05_RS01510 SH05_01510 SH05_RS01510 314971 315642 + endonuclease V Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA%3B cleaves DNA containing urea residues%2C AP sites%2C base mismatches%2C insertion/deletion mismatches%2C flaps%2C and pseudo-Y structures gene gene301 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01510 SH05_RS01515 SH05_01515 SH05_RS01515 315685 316275 + hypothetical protein gene gene302 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01515 SH05_RS01520 SH05_01520 SH05_RS01520 316462 316734 + DNA-binding protein HU-alpha gene gene303 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01520 SH05_RS01525 SH05_01525 SH05_RS01525 316747 317442 + DUF1481 domain-containing protein gene gene304 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01525 SH05_RS01530 SH05_01530 zraP zraP 317444 317869 - zinc resistance-associated protein gene gene305 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01530 SH05_RS01535 SH05_01535 SH05_RS01535 318107 319504 + two-component system sensor histidine kinase gene gene306 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01535 SH05_RS01540 SH05_01540 SH05_RS01540 319501 320826 + ZraR family transcriptional regulator DNA-binding response regulator in two-component regulatory system with ZraS%3B response regulator/sigma54 interaction protein gene gene307 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01540 SH05_RS01545 SH05_01545 SH05_RS01545 320823 322112 - phosphoribosylamine--glycine ligase catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis gene gene308 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01545 SH05_RS01550 SH05_01550 purH purH 322124 323713 - bifunctional purine biosynthesis protein PurH involved in de novo purine biosynthesis gene gene309 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01550 SH05_RS01555 SH05_RS01555 SH05_RS01555 323667 323852 - hypothetical protein gene gene310 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01555 SH05_RS01560 SH05_RS01560 SH05_RS01560 323786 323989 - hypothetical protein gene gene311 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01560 SH05_RS01565 SH05_01555 SH05_RS01565 324326 325881 + 16S ribosomal RNA rRNA gene312 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01565 SH05_RS01570 SH05_01560 SH05_RS01570 325955 326030 + tRNA-Glu tRNA gene313 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01570 SH05_RS01575 SH05_01565 SH05_RS01575 326215 329145 + 23S ribosomal RNA rRNA gene314 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01575 SH05_RS01580 SH05_01570 SH05_RS01580 329223 329338 + 5S ribosomal RNA rRNA gene315 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01580 SH05_RS01585 SH05_01575 SH05_RS01585 329415 329798 + stress-induced protein gene gene316 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01585 SH05_RS01590 SH05_01580 SH05_RS01590 329861 330304 - GNAT family acetyltransferase gene gene317 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01590 SH05_RS01595 SH05_01585 SH05_RS01595 330461 331390 + homoserine O-succinyltransferase catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis gene gene318 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01595 SH05_RS01600 SH05_01590 SH05_RS01600 331659 333260 + malate synthase A Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle gene gene319 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01600 SH05_RS01605 SH05_01595 SH05_RS01605 333290 334594 + isocitrate lyase gene gene320 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01605 SH05_RS01610 SH05_01600 aceK aceK 334777 336513 + isocitrate dehydrogenase catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity%3B unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol gene gene321 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01610 SH05_RS01615 SH05_01605 SH05_RS01615 336482 338668 - ankyrin repeat protein A gene gene322 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01615 SH05_RS01620 SH05_01610 SH05_RS01620 338985 339809 - acetate operon repressor regulates the glyoxylate bypass operon (aceBAK)%2C which encodes isocitrate lyase%2C malate synthase and isocitrate dehydrogenase kinase/phosphorylase gene gene323 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01620 SH05_RS01625 SH05_01615 metH metH 340009 343692 + methionine synthase one of two methionine synthases in Escherichia coli%3B MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine%3B requires zinc for activity gene gene324 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01625 SH05_RS01630 SH05_01620 SH05_RS01630 343912 345543 + transporter gene gene325 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01630 SH05_RS01635 SH05_01625 SH05_RS01635 345634 346323 - peptidase E peptidase E%3B catalyzes the hydrolysis of dipeptides with an N-terminal aspartate residue%3B belongs to peptidase S51 family gene gene326 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01635 SH05_RS01640 SH05_01630 SH05_RS01640 346535 347407 + ribosomal large subunit pseudouridine synthase F catalyzes the synthesis of pseudouridine from U-2604 in the 23S ribosomal RNA gene gene327 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01640 SH05_RS01645 SH05_01635 SH05_RS01645 347540 347812 - DUF3811 domain-containing protein gene gene328 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01645 SH05_RS01650 SH05_01640 SH05_RS01650 348065 349414 - lysine-sensitive aspartokinase 3 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP%3B functions in amino acid biosynthesis%3B lysine sensitive gene gene329 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01650 SH05_RS01655 SH05_01645 pgi pgi 349939 351588 + glucose-6-phosphate isomerase functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis%3B catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate%3B member of PGI family gene gene330 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01655 SH05_RS01660 SH05_01650 SH05_RS01660 351711 352214 - transposase gene gene331 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01660 SH05_RS01665 SH05_01655 SH05_RS01665 352133 352408 - repressor TnpA gene gene332 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01665 SH05_RS01670 SH05_01660 SH05_RS01670 352864 353106 + polysaccharide production threonine-rich protein gene gene333 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01670 SH05_RS01675 SH05_01665 SH05_RS01675 353220 353858 + polysaccharide production lipoprotein gene gene334 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01675 SH05_RS01680 SH05_01670 SH05_RS01680 353855 354592 + polysaccharide export OMA protein gene gene335 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01680 SH05_RS01685 SH05_01675 SH05_RS01685 354592 356688 + DUF940 domain-containing protein gene gene336 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01685 SH05_RS01690 SH05_01680 SH05_RS01690 356735 357013 - periplasmic protein gene gene337 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01690 SH05_RS01695 SH05_01685 SH05_RS01695 357014 357157 + hypothetical protein gene gene338 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01695 SH05_RS01700 SH05_01695 SH05_RS01700 357283 357693 + protein PsiE gene gene339 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01700 SH05_RS01705 SH05_01700 xylE xylE 357737 359212 - D-xylose-proton symporter xylose/proton symporter%3B member of the major facilitator superfamily (MFS) of transporter gene gene340 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01705 SH05_RS01710 SH05_01705 malG malG 359584 360474 - maltose ABC transporter permease with MalKFE is involved in the transport of maltose into the cell gene gene341 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01710 SH05_RS01715 SH05_01710 malF malF 360489 362033 - maltose ABC transporter permease with MalKGE is involved in maltose transport into the cell gene gene342 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01715 SH05_RS01720 SH05_01715 malE malE 362187 363377 - maltose-binding periplasmic protein functions in the MalKFGE ABC transporter complex to transport maltose into the cell by using ATP hydrolysis gene gene343 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01720 SH05_RS01725 SH05_01720 SH05_RS01725 363470 363565 - sugar ABC transporter gene gene344 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01725 SH05_RS01730 SH05_01725 SH05_RS01730 363742 364857 + maltose/maltodextrin import ATP-binding protein MalK with malEFG is involved in import of maltose/maltodextrin gene gene345 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01730 SH05_RS01735 SH05_01730 lamB lamB 364929 366269 + maltoporin porin involved in the transport of maltose and maltodextrins gene gene346 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01735 SH05_RS01740 SH05_01735 SH05_RS01740 366512 367432 + maltose operon periplasmic protein gene gene347 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01740 SH05_RS01745 SH05_01740 SH05_RS01745 367661 367855 + hypothetical protein gene gene348 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01745 SH05_RS01750 SH05_01745 SH05_RS01750 367913 369241 + hypothetical protein in E. coli%2C some yjbl mutations have been reported as suppressors of dnaG mutations gene gene349 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01750 SH05_RS01755 SH05_01750 ubiC ubiC 369464 369961 + Chorismate pyruvate-lyase catalyzes the formation of 4-hydroxybenzoate from chorismate gene gene350 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01755 SH05_RS01760 SH05_01755 ubiA ubiA 369974 370846 + 4-hydroxybenzoate octaprenyltransferase catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate%2C as part of the ubiquinone biosynthesis pathway gene gene351 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01760 SH05_RS01765 SH05_01760 SH05_RS01765 371001 373424 - glycerol-3-phosphate acyltransferase PlsB%3B catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA gene gene352 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01765 SH05_RS01770 SH05_01765 SH05_RS01770 373595 373963 + diacylglycerol kinase catalyzes the phosphorylation of diacylglycerol to form diacylglycerol phosphate gene gene353 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01770 SH05_RS01775 SH05_01770 SH05_RS01775 374073 374681 + LexA repressor Represses a number of genes involved in the response to DNA damage gene gene354 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01775 SH05_RS01780 SH05_01775 SH05_RS01780 374754 376079 + MATE family efflux transporter gene gene355 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01780 SH05_RS01785 SH05_01780 SH05_RS01785 376195 376404 + stress-induced protein%2C UPF0337 family gene gene356 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01785 SH05_RS01790 SH05_01785 SH05_RS01790 376446 376961 - zinc uptake regulation protein Acts as a negative controlling element%2C employing Zn(2+) as a cofactor to bind the operator of the repressed genes znuACB gene gene357 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01790 SH05_RS01795 SH05_01790 SH05_RS01795 377279 377533 + hypothetical protein gene gene358 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01795 SH05_RS01800 SH05_01795 SH05_RS01800 377557 378264 + hypothetical protein gene gene359 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01800 SH05_RS01805 SH05_01800 SH05_RS01805 378672 379664 + tRNA-dihydrouridine synthase A gene gene360 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01805 SH05_RS01810 SH05_01805 pspG pspG 379798 380040 + phage shock protein G coordinately regulated along with pspA%3B PspF-dependent induction in response to secretin overexpression in Yersinia gene gene361 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01810 SH05_RS01815 SH05_01810 SH05_RS01815 380206 381189 - quinone oxidoreductase 1 gene gene362 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01815 SH05_RS01820 SH05_01815 SH05_RS01820 381272 382687 + replicative DNA helicase unwinds double stranded DNA gene gene363 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01820 SH05_RS01825 SH05_01820 alr alr 382740 383819 + alanine racemase biosynthetic converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer gene gene364 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01825 SH05_RS01830 SH05_01825 SH05_RS01830 384072 385265 + aromatic-amino-acid aminotransferase catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate gene gene365 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01830 SH05_RS01835 SH05_RS01835 SH05_RS01835 385487 385970 - hypothetical protein gene gene366 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01835 SH05_RS01840 SH05_01835 aphA aphA 386372 387085 + class B acid phosphatase Class B%3B non-specific%3B catalyzes the dephosphorylation of organic phosphomonoesters%3B also has phosphotransferase activity gene gene367 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01840 SH05_RS01845 SH05_01840 SH05_RS01845 387196 387612 + thiamin phosphate synthase gene gene368 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01845 SH05_RS01850 SH05_01845 SH05_RS01850 387616 387972 + hypothetical protein gene gene369 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01850 SH05_RS01855 SH05_01850 SH05_RS01855 388007 390829 - UvrABC system protein A gene gene370 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01855 SH05_RS01860 SH05_01855 SH05_RS01860 391083 391619 + single-stranded DNA-binding protein binds to single stranded DNA and PriA helcase facilitate replication restart gene gene371 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01860 SH05_RS01865 SH05_01860 SH05_RS01865 391718 391999 - membrane protein gene gene372 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01865 SH05_RS01870 SH05_01865 SH05_RS01870 392429 394015 + cyclic-di-GMP phosphodiesterase gene gene373 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01870 SH05_RS01875 SH05_01870 SH05_RS01875 394018 394341 - regulatory protein SoxS regulates genes involved in response to oxidative stress gene gene374 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01875 SH05_RS01880 SH05_01875 SH05_RS01880 394427 394891 + redox-sensitive transcriptional activator SoxR gene gene375 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01880 SH05_RS01885 SH05_01880 SH05_RS01885 395437 396786 + guanine/hypoxanthine permease GhxP gene gene376 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01885 SH05_RS01890 SH05_01885 SH05_RS01890 396938 398587 + cation/proton antiporter gene gene377 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01890 SH05_RS01895 SH05_01890 SH05_RS01895 398741 400033 - hypothetical protein gene gene378 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01895 SH05_RS01900 SH05_01895 actP actP 400211 401860 - cation/acetate symporter ActP member of the sodium:solute symporter family%3B cotranscribed with the acs gene which encodes acetyl coenzyme A synthase%3B mutations affect acetate uptake gene gene379 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01900 SH05_RS01905 SH05_01900 SH05_RS01905 401857 402171 - hypothetical protein gene gene380 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01905 SH05_RS01910 SH05_01905 SH05_RS01910 402371 404329 - acetyl-CoA synthetase Acs%3B catalyzes the conversion of acetate and CoA to acetyl-CoA gene gene381 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01910 SH05_RS01915 SH05_01910 nrfA nrfA 404722 406158 + cytochrome c-552 catalyzes the formate-dependent reduction of nitrite to ammonia%3B cytochrome C552 gene gene382 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01915 SH05_RS01920 SH05_01915 SH05_RS01920 406203 406769 + cytochrome c-type protein NrfB part of nitrite reductase complex%3B NrfB is active at high nitrate conditions%3B NrfA%2C B%2C C%2C and D are essential for the formate-dependent nitrite reduction to ammonia gene gene383 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01920 SH05_RS01925 SH05_01920 SH05_RS01925 406766 407437 + protein NrfC 4Fe4S subunit%3B may be involved in the transfer of electrons from quinones to the c-type cytochromes gene gene384 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01925 SH05_RS01930 SH05_01925 SH05_RS01930 407434 408390 + protein NrfD membrane protein%2C may be involved in the transfer of electrons from quinones to c-type cytochromes gene gene385 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01930 SH05_RS01935 SH05_01930 SH05_RS01935 408521 410128 + heme lyase subunit NrfE with NrfF and NrfG catalyzes the insertion of heme into cytochrome c552 gene gene386 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01935 SH05_RS01940 SH05_01935 SH05_RS01940 410121 410504 + formate-dependent nitrite reductase complex subunit NrfF gene gene387 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01940 SH05_RS01945 SH05_01940 SH05_RS01945 410501 411097 + formate-dependent nitrite reductase complex subunit NrfG gene gene388 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01945 SH05_RS01950 SH05_01945 SH05_RS01950 411439 412752 + proton glutamate symport protein gene gene389 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01950 SH05_RS01955 SH05_01950 SH05_RS01955 413283 413972 - hypothetical protein gene gene390 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01955 SH05_RS01960 SH05_01955 SH05_RS01960 414066 415745 - formate dehydrogenase subunit alpha gene gene391 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01960 SH05_RS01965 SH05_01960 SH05_RS01965 415794 416213 - spermidine/putrescine ABC transporter substrate-binding protein gene gene392 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01965 SH05_RS01970 SH05_01965 SH05_RS01970 416411 417877 - multidrug resistance outer membrane protein MdtP part of a multidrug efflux system involved in resistance to acriflavin%2C puromycin%2C erytjhromycin and tetraphenylarsonium chloride%3B member of the outer membrane factor (OMF) family gene gene393 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01970 SH05_RS01975 SH05_01970 SH05_RS01975 417874 419925 - multidrug resistance protein MdtO possibly part of a tripartite efflux system composed of MdtN%2C MdtO and MdtP which could be involved in resistance to puromycin%2C acriflavine and tetraphenylarsonium chloride gene gene394 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01975 SH05_RS01980 SH05_01975 SH05_RS01980 419925 420956 - multidrug resistance protein MdtN with MdtO and MdtP is involved in resistance to puromycin%2C acriflavine and tetraphenylarsonium chloride gene gene395 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01980 SH05_RS01985 SH05_01980 SH05_RS01985 420975 421250 - transporter gene gene396 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01985 SH05_RS01990 SH05_01985 SH05_RS01990 421459 423444 - MBL fold hydrolase gene gene397 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01990 SH05_RS01995 SH05_01990 SH05_RS01995 423717 424646 - D-allose kinase gene gene398 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS01995 SH05_RS02000 SH05_01995 SH05_RS02000 424630 425325 - D-allulose-6-phosphate 3-epimerase gene gene399 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02000 SH05_RS02005 SH05_02000 SH05_RS02005 425336 426316 - D-allose ABC transporter permease gene gene400 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02005 SH05_RS02010 SH05_02005 SH05_RS02010 426295 427827 - D-allose import ATP-binding protein AlsA with AlsBC acts to import allose into the cell%3B AlsA contain 2 ATP-binding domains gene gene401 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02010 SH05_RS02015 SH05_02010 SH05_RS02015 427954 428889 - D-allose-binding periplasmic protein gene gene402 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02015 SH05_RS02020 SH05_02015 SH05_RS02020 428948 429838 - RpiR family transcriptional regulator involved in rpiB and als operon repression gene gene403 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02020 SH05_RS02025 SH05_02020 SH05_RS02025 430197 430646 + ribose-5-phosphate isomerase B gene gene404 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02025 SH05_RS02030 SH05_02025 SH05_RS02030 430715 431044 + periplasmic protein gene gene405 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02030 SH05_RS02035 SH05_02030 phnP phnP 431191 431949 - phosphoribosyl 1%2C2-cyclic phosphodiesterase required for the use of phosphonates and phosphite as phosphorus sources gene gene406 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02035 SH05_RS02040 SH05_02035 SH05_RS02040 431951 432385 - protein PhnO PhnO in Salmonella enterica catalyzes the acetylation of a range of aminoalkylphosphonic acids%3B part of the biochemical pathway that enables the cell to use phosphonates as a phosphorus source%3B Escherichia coli uses a different mechanism of phosphonate catabolism where PhnO is not essential and seems to play a regulatory role gene gene407 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02040 SH05_RS02045 SH05_02040 SH05_RS02045 432372 432929 - ribose 1%2C5-bisphosphate phosphokinase PhnN gene gene408 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02045 SH05_RS02050 SH05_02045 SH05_RS02050 432929 434065 - alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase gene gene409 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02050 SH05_RS02055 SH05_02050 SH05_RS02055 434062 434742 - alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL gene gene410 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02055 SH05_RS02060 SH05_02055 phnK phnK 434853 435611 - phosphonate C-P lyase gene gene411 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02060 SH05_RS02065 SH05_02060 SH05_RS02065 435608 436453 - alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase gene gene412 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02065 SH05_RS02070 SH05_02065 SH05_RS02070 436446 437510 - alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI required for the use of phosphonate and phosphite gene gene413 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02070 SH05_RS02075 SH05_02070 phnH phnH 437510 438094 - alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH gene gene414 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02075 SH05_RS02080 SH05_02075 SH05_RS02080 438091 438543 - alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG gene gene415 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02080 SH05_RS02085 SH05_02080 SH05_RS02085 438544 439269 - transcriptional regulator may be involved in phosphonate uptake and biodegradation gene gene416 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02085 SH05_RS02090 SH05_RS02090 SH05_RS02090 439290 440077 - phosphonate ABC transporter permease gene gene417 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02090 SH05_RS02095 SH05_02090 SH05_RS02095 440183 441199 - phosphonates-binding periplasmic protein with PhnCE is involved in the transport of phosphonates gene gene418 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02095 SH05_RS02100 SH05_02095 SH05_RS02100 441224 442012 - phosphonates import ATP-binding protein PhnC gene gene419 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02100 SH05_RS02105 SH05_02100 SH05_RS02105 442145 442588 - protein PhnB gene gene420 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02105 SH05_RS02110 SH05_02105 SH05_RS02110 443246 443581 - protein PhnA gene gene421 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02110 SH05_RS02115 SH05_02110 SH05_RS02115 443982 446210 + clamp-binding protein CrfC gene gene422 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02115 SH05_RS02120 SH05_02115 SH05_RS02120 446207 447085 + YjcZ family protein%3B yhjH motility defect suppressor gene gene423 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02120 SH05_RS02125 SH05_02120 SH05_RS02125 447349 448851 + proline/betaine transporter gene gene424 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02125 SH05_RS02130 SH05_02125 SH05_RS02130 448963 449052 + membrane-bound BasS regulator gene gene425 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02130 SH05_RS02135 SH05_02130 SH05_RS02135 449028 450119 - two-component system sensor histidine kinase gene gene426 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02135 SH05_RS02140 SH05_02135 SH05_RS02140 450129 450797 - two-component system response regulator response regulator in two-component regulatory system with BasS gene gene427 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02140 SH05_RS02145 SH05_02140 SH05_RS02145 450794 452437 - phosphoethanolamine transferase EptA gene gene428 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02145 SH05_RS02150 SH05_02145 SH05_RS02150 452541 453878 - arginine/agmatine antiporter gene gene429 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02150 SH05_RS02155 SH05_02150 SH05_RS02155 454015 454776 - transcriptional regulator regulates genes involved in arginine decarboxylase gene gene430 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02155 SH05_RS02160 SH05_02155 SH05_RS02160 455101 457371 - arginine decarboxylase biodegradative%3B catalyzes the formation of agmatine from arginine gene gene431 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02160 SH05_RS02165 SH05_02160 SH05_RS02165 457567 458475 - melibiose operon regulatory protein gene gene432 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02165 SH05_RS02170 SH05_02165 SH05_RS02170 458507 458668 + hypothetical protein gene gene433 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02170 SH05_RS02175 SH05_02170 SH05_RS02175 458758 460113 + alpha-galactosidase catalyses the hydrolysis of terminal non-reducing alpha-D-galactose residues in alpha-D-galactosides gene gene434 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02175 SH05_RS02180 SH05_02175 SH05_RS02180 460216 461637 + melibiose carrier protein gene gene435 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02180 SH05_RS02185 SH05_02180 SH05_RS02185 461776 462405 - hypothetical protein gene gene436 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02185 SH05_RS02190 SH05_02185 SH05_RS02190 462527 464173 - fumarate hydratase class I%2C anaerobic catalyzes the formation of malate from fumerate gene gene437 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02190 SH05_RS02195 SH05_02190 SH05_RS02195 464251 465591 - anaerobic C4-dicarboxylate transporter DcuB functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate%3B similar to DcuA%3B DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate%2C malate%2C fumarate and succinate) transporters gene gene438 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02195 SH05_RS02200 SH05_RS02200 SH05_RS02200 466057 466185 + glutamate decarboxylase gene gene439 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02200 SH05_RS02205 SH05_02200 SH05_RS02205 466162 466881 - transcriptional regulator response regulator in two-component regulatory system with DcuS%3B phosphorylated DcuR activates transcription of genes involved in anaerobic fumarate respiration gene gene440 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02205 SH05_RS02210 SH05_02205 SH05_RS02210 466878 468509 - sensor histidine kinase C4-dicarboxylate-sensing histidine kinase%3B part of two-component regulatory system with DcuR%3B regulates anaerobic fumarate respiration gene gene441 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02210 SH05_RS02215 SH05_02210 SH05_RS02215 468690 468920 + hypothetical protein gene gene442 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02215 SH05_RS02220 SH05_02215 SH05_RS02220 468932 469204 + GNAT family acetyltransferase gene gene443 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02220 SH05_RS02225 SH05_02220 SH05_RS02225 469521 469727 + hypothetical protein gene gene444 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02225 SH05_RS02230 SH05_02225 SH05_RS02230 469755 469928 + toxin of GhoTS toxin-antitoxin pair%3B membrane-lytic protein%3B stimulator of persister cell formation gene gene445 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02230 SH05_RS02235 SH05_02230 lysS lysS 470047 471564 - lysine--tRNA ligase heat inducible class II%3B LysRS2%3B catalyzes a two-step reaction%2C first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B in Methanosarcina barkeri%2C LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1 gene gene446 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02235 SH05_RS02240 SH05_02235 SH05_RS02240 471801 473258 - dipeptide and tripeptide permease C gene gene447 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02240 SH05_RS02245 SH05_02240 SH05_RS02245 473317 475464 - lysine decarboxylase inducible constitutive%3B catalyzes the formation of cadaverine from lysine gene gene448 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02245 SH05_RS02250 SH05_02245 cadB cadB 475544 476878 - cadaverine/lysine antiporter antiporter protein responsible for lysine import and cadaverine export%3B member of the lysine-dependent acid resistance system 4 (AR4)%3B inner membrane protein gene gene449 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02250 SH05_RS02255 SH05_02250 SH05_RS02255 477243 478781 - transcriptional activator CadC regulates the cadBA operon gene gene450 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02255 SH05_RS02260 SH05_02255 SH05_RS02260 479398 479473 - tRNA-Phe tRNA gene451 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02260 SH05_RS02265 SH05_02260 SH05_RS02265 479580 480155 - transcriptional regulator gene gene452 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02265 SH05_RS02270 SH05_02265 dipZ dipZ 480192 481889 - thiol:disulfide interchange protein DsbD two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm%3B DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm gene gene453 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02270 SH05_RS02275 SH05_02270 SH05_RS02275 481865 482203 - divalent-cation tolerance protein CutA copper binding protein required for copper tolerance%3B involved in resistance toward heavy metals gene gene454 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02275 SH05_RS02280 SH05_02275 SH05_RS02280 482319 483620 - anaerobic C4-dicarboxylate transporter DcuA functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate%3B similar to dcuB gene gene455 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02280 SH05_RS02285 SH05_02280 aspA aspA 483738 485174 - aspartate ammonia-lyase catalyzes the formation of fumarate from aspartate gene gene456 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02285 SH05_RS02290 SH05_02285 fxsA fxsA 485511 485987 + suppressor of F exclusion of phage T7 F exclusion of bacteriophage T7%3B overproduction of this protein in Escherichia coli inhibits the F plasmid-mediated exclusion of bacteriophage T7%3B interacts with the F plasmid-encoded PifA protein%3B inner membrane protein gene gene457 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02290 SH05_RS02295 SH05_02290 SH05_RS02295 486003 487259 - hypothetical protein uncharacterized member of the APC superfamily of amino acid transporters%3B unknown function gene gene458 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02295 SH05_RS02300 SH05_02295 groES groES 487535 487828 + molecular chaperone GroES 10 kDa chaperonin%3B Cpn10%3B GroES%3B forms homoheptameric ring%3B binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it%3B folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES%3B release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring gene gene459 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02300 SH05_RS02305 SH05_02300 groEL groEL 487872 489518 + chaperonin GroEL 60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds%3B many bacteria have multiple copies of the groEL gene which are active under different environmental conditions%3B the B.japonicum protein in this cluster is expressed constitutively%3B in Rhodobacter%2C Corynebacterium and Rhizobium this protein is essential for growth gene gene460 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02305 SH05_RS02310 SH05_02305 SH05_RS02310 489656 490009 + DUF4156 domain-containing protein gene gene461 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02310 SH05_RS02315 SH05_02310 SH05_RS02315 490212 491081 - hypothetical protein gene gene462 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02315 SH05_RS02320 SH05_02315 SH05_RS02320 491476 492504 - EF-P beta-lysylation protein EpmB gene gene463 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02320 SH05_RS02325 SH05_02320 SH05_RS02325 492546 493112 + elongation factor P gene gene464 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02325 SH05_RS02330 SH05_02325 SH05_RS02330 493164 493289 + entericidin A acts as and antidote to the bacteriolytic entericidin B in the EcnAB toxin-antitoxin complex gene gene465 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02330 SH05_RS02335 SH05_02330 SH05_RS02335 493400 493546 + entericidin B gene gene466 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02335 SH05_RS02340 SH05_02335 SH05_RS02340 493722 494039 + quaternary ammonium compound-resistance protein SugE member of the SMR family of proton-dependent drug efflux transporters%3B quaternary ammonium compound efflux pump%3B confers resistance to cetylpyridinium%2C cetyldimethylethyl ammonium and cetrimide cations gene gene467 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02340 SH05_RS02345 SH05_02340 SH05_RS02345 494036 494569 - hypothetical protein lipocalin%3B globomycin-sensitive outer membrane lipoprotein gene gene468 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02345 SH05_RS02350 SH05_02345 SH05_RS02350 494658 495791 - BlaEC family class C beta-lactamase gene gene469 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02350 SH05_RS02355 SH05_02350 SH05_RS02355 495854 496213 - fumarate reductase subunit D in conjunction with FrdC acts to anchor the catalytic components of the fumarate reductase to the cytoplasmic membrane gene gene470 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02355 SH05_RS02360 SH05_02355 SH05_RS02360 496224 496619 - fumarate reductase subunit C part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB gene gene471 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02360 SH05_RS02365 SH05_02360 SH05_RS02365 496630 497364 - fumarate reductase iron-sulfur subunit part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB gene gene472 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02365 SH05_RS02370 SH05_02365 SH05_RS02370 497357 499165 - fumarate reductase flavoprotein subunit part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB gene gene473 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02370 SH05_RS02375 SH05_02370 SH05_RS02375 499490 500467 + elongation factor P--(R)-beta-lysine ligase poxA%3B regulates pyruvate oxidase poxB gene gene474 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02375 SH05_RS02380 SH05_02375 SH05_RS02380 500686 502188 + inner membrane transporter YjeM gene gene475 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02380 SH05_RS02385 SH05_02380 SH05_RS02385 502240 502554 + hypothetical protein gene gene476 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02385 SH05_RS02390 SH05_02385 SH05_RS02390 502551 502865 + hypothetical protein gene gene477 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02390 SH05_RS02395 SH05_02390 SH05_RS02395 502894 506217 - miniconductance mechanosensitive channel MscM gene gene478 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02395 SH05_RS02400 SH05_02395 psd psd 506239 507207 - phosphatidylserine decarboxylase proenzyme catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine gene gene479 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02400 SH05_RS02405 SH05_02400 SH05_RS02405 507304 508356 - ribosome small subunit-dependent GTPase A EngC%3B RsgA%3B CpgA%3B circularly permuted GTPase%3B ribosome small subunit-dependent GTPase A%3B has the pattern G4-G1-G3 as opposed to other GTPases%3B interacts strongly with 30S ribosome which stimulates GTPase activity gene gene480 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02405 SH05_RS02410 SH05_02405 SH05_RS02410 508451 508996 + oligoribonuclease 3'-5' exoribonuclease specific for small oligoribonuclotides gene gene481 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02410 SH05_RS02415 SH05_02410 SH05_RS02415 509207 509282 + tRNA-Gly tRNA gene482 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02415 SH05_RS02420 SH05_02415 SH05_RS02420 509319 509394 + tRNA-Gly tRNA gene483 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02420 SH05_RS02425 SH05_02420 SH05_RS02425 509430 509505 + tRNA-Gly tRNA gene484 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02425 SH05_RS02430 SH05_02425 SH05_RS02430 509775 510914 - epoxyqueuosine reductase gene gene485 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02430 SH05_RS02435 SH05_02430 SH05_RS02435 510928 512460 + carbohydrate kinase gene gene486 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02435 SH05_RS02440 SH05_02435 SH05_RS02440 512432 512893 + tRNA threonylcarbamoyladenosine biosynthesis protein TsaE needed for nucleoid integrity%3B possibly involved in cell wall synthesis gene gene487 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02440 SH05_RS02445 SH05_02440 SH05_RS02445 512912 514249 + N-acetylmuramoyl-L-alanine amidase gene gene488 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02445 SH05_RS02450 SH05_02445 SH05_RS02450 514259 516106 + DNA mismatch repair protein MutL gene gene489 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02450 SH05_RS02455 SH05_02450 miaA miaA 516099 517049 + tRNA dimethylallyltransferase IPP transferase%3B isopentenyltransferase%3B involved in tRNA modification%3B in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil%3B further tRNA modifications may occur%3B mutations in miaA result in defects in translation efficiency and fidelity gene gene490 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02455 SH05_RS02460 SH05_02455 hfq hfq 517135 517443 + RNA chaperone Hfq HF-I%2C host factor for RNA phage Q beta replication gene gene491 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02460 SH05_RS02465 SH05_02460 SH05_RS02465 517519 518799 + GTPase HflX involved in modulation of proteins HflK and HflC%3B part of the hflA locus (high frequency of lysogenization) which governs the lysis-lysogeny decision of bacteriophage lambda by controlling stability of the phage cII protein gene gene492 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02465 SH05_RS02470 SH05_02465 SH05_RS02470 518885 520144 + cell division protein FtsH with HflC inhibits proteolysis of lambda cII protein by FtsH gene gene493 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02470 SH05_RS02475 SH05_02470 SH05_RS02475 520147 521151 + modulator of FtsH protease HflC with HflK inhibits proteolysis of lambda cII protein by FtsH gene gene494 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02475 SH05_RS02480 SH05_02475 SH05_RS02480 521233 521430 + membrane protein gene gene495 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02480 SH05_RS02485 SH05_02480 SH05_RS02485 521534 522832 + adenylosuccinate synthetase catalyzes the formation of N6-(1%2C2%2C-dicarboxyethyl)-AMP from L-aspartate%2C inosine monophosphate and GTP in AMP biosynthesis gene gene496 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02485 SH05_RS02490 SH05_02485 SH05_RS02490 523037 523462 + transcriptional regulator negatively regulates the transcription of genes upregulated by nitrosative stress gene gene497 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02490 SH05_RS02495 SH05_02490 SH05_RS02495 523501 525942 + exoribonuclease R 3'-5'exoribonuclease that acts nonspecifically on poly(A)%2C poly(U) and ribosomal RNAs gene gene498 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02495 SH05_RS02500 SH05_02495 SH05_RS02500 526122 526853 + 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB Specifically methylates the ribose of guanosine 2251 in 23S rRNA gene gene499 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02500 SH05_RS02505 SH05_02500 SH05_RS02505 526980 527381 + DUF2170 domain-containing protein gene gene500 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02505 SH05_RS02510 SH05_02505 SH05_RS02510 527400 528098 + PspA/IM30 family protein gene gene501 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02510 SH05_RS02515 SH05_02510 SH05_RS02515 528149 528808 + DUF2491 domain-containing protein gene gene502 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02515 SH05_RS02520 SH05_02515 SH05_RS02520 528826 529224 + hypothetical protein gene gene503 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02520 SH05_RS02525 SH05_02520 SH05_RS02525 529234 529872 + DUF1190 domain-containing protein gene gene504 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02525 SH05_RS02530 SH05_02525 SH05_RS02530 529875 531038 + ATP-Grasp family ATPase gene gene505 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02530 SH05_RS02535 SH05_02530 SH05_RS02535 531122 532747 + DNA alkylation damage repair protein catalyzes the formation of 3-methylcrotonyl-CoA from isovaleryl-CoA gene gene506 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02535 SH05_RS02540 SH05_02535 SH05_RS02540 532864 533139 - DUF1471 domain-containing protein gene gene507 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02540 SH05_RS02545 SH05_02540 SH05_RS02545 533288 533617 - lipoprotein BsmA in Escherichia coli%2C mutation of this gene affects biofilm maturation%2C stress response%2C and motility gene gene508 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02545 SH05_RS02550 SH05_02545 SH05_RS02550 533799 534548 + esterase YjfP%3B esterase activity towards palmitoyl-CoA and pNP-butyrate in vitro%3B unknown function and substrate in vivo gene gene509 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02550 SH05_RS02555 SH05_02550 SH05_RS02555 534545 535300 - transcriptional regulator negative regulator of ulaG and ulaABCDEF gene gene510 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02555 SH05_RS02560 SH05_02555 SH05_RS02560 535408 536472 - L-ascorbate-6-phosphate lactonase UlaG gene gene511 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02560 SH05_RS02565 SH05_02560 SH05_RS02565 536827 538224 + ascorbate-specific permease IIC component UlaA gene gene512 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02565 SH05_RS02570 SH05_02565 SH05_RS02570 538240 538545 + ascorbate-specific phosphotransferase enzyme IIB component involved in the phosphorylation and transport of sugars across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake gene gene513 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02570 SH05_RS02575 SH05_02570 SH05_RS02575 538555 539019 + ascorbate-specific phosphotransferase enzyme IIA component involved in the phosphorylation and transport of sugars across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake gene gene514 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02575 SH05_RS02580 SH05_02575 ulaD ulaD 539033 539683 + 3-keto-L-gulonate-6-phosphate decarboxylase ulaD catalyzes the formation of L-xylulose-5-phosphate from 3-keto-L-gulonate-6-phosphate in anaerobic L-ascorbate utilization gene gene515 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02580 SH05_RS02585 SH05_02580 SH05_RS02585 539693 540547 + L-ribulose-5-phosphate 3-epimerase UlaE gene gene516 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02585 SH05_RS02590 SH05_02585 araD araD 540547 541233 + L-ribulose-5-phosphate 4-epimerase UlaF catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate%3B links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source gene gene517 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02590 SH05_RS02595 SH05_02590 SH05_RS02595 541363 541638 - hypothetical protein gene gene518 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02595 SH05_RS02600 SH05_02595 SH05_RS02600 541722 541841 + hypothetical protein gene gene519 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02600 SH05_RS02605 SH05_02600 rpsF rpsF 541965 542360 + 30S ribosomal protein S6 binds cooperatively with S18 to the S15-16S complex%2C allowing platform assembly to continue with S11 and S21 gene gene520 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02605 SH05_RS02610 SH05_02605 SH05_RS02610 542367 542681 + primosomal replication protein n binds single-stranded DNA at the primosome assembly site gene gene521 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02610 SH05_RS02615 SH05_02610 rpsR rpsR 542686 542913 + 30S ribosomal protein S18 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA%3B helps stabilize the platform of the 30S subunit gene gene522 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02615 SH05_RS02620 SH05_02615 rplI rplI 542955 543404 + 50S ribosomal protein L9 in Escherichia coli this protein is wrapped around the base of the L1 stalk gene gene523 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02620 SH05_RS02625 SH05_02620 SH05_RS02625 543475 544269 - hypothetical protein gene gene524 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02625 SH05_RS02630 SH05_02625 SH05_RS02630 544616 544942 + hypothetical protein gene gene525 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02630 SH05_RS02635 SH05_02630 SH05_RS02635 544926 545564 - OapA family protein gene gene526 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02635 SH05_RS02640 SH05_02635 SH05_RS02640 545782 546402 + FKBP-type peptidyl-prolyl cis-trans isomerase FKBP-type%3B rotamase%3B catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides gene gene527 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02640 SH05_RS02645 SH05_02640 SH05_RS02645 546711 548123 + D-serine/D-alanine/glycine transporter gene gene528 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02645 SH05_RS02650 SH05_02645 SH05_RS02650 548168 548830 - iron-sulfur cluster repair protein YtfE Involved in anaerobic NO protection and iron metabolism gene gene529 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02650 SH05_RS02655 SH05_02650 SH05_RS02655 548938 549903 - hypothetical protein gene gene530 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02655 SH05_RS02660 SH05_02655 SH05_RS02660 550011 550871 - quinone oxidoreductase 2 gene gene531 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02660 SH05_RS02665 SH05_02660 SH05_RS02665 550870 551340 + HxlR family transcriptional regulator gene gene532 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02665 SH05_RS02670 SH05_02665 cpdB cpdB 551469 553412 - 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic enzyme%3B functions during ribonucleic acid degradation%3B 2'%2C3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate gene gene533 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02670 SH05_RS02675 SH05_02670 SH05_RS02675 553602 554342 + 3'(2')%2C5'-bisphosphate nucleotidase CysQ catalyzes the formation of AMP from adenosine-3'%2C5'-bisphosphate gene gene534 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02675 SH05_RS02680 SH05_02675 SH05_RS02680 554554 555492 + hypothetical protein gene gene535 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02680 SH05_RS02685 SH05_02680 SH05_RS02685 555555 556109 - transcriptional regulator gene gene536 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02685 SH05_RS02690 SH05_02685 SH05_RS02690 556434 556640 + DUF1107 domain-containing protein gene gene537 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02690 SH05_RS02695 SH05_02690 SH05_RS02695 556719 558062 - hypothetical protein gene gene538 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02695 SH05_RS02700 SH05_02695 SH05_RS02700 558385 559023 - peptide methionine sulfoxide reductase MsrA this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form%3B provides protection against oxidative stress gene gene539 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02700 SH05_RS02705 SH05_02700 SH05_RS02705 559131 559259 + hypothetical protein gene gene540 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02705 SH05_RS02710 SH05_02705 SH05_RS02710 559229 560962 + translocation and assembly module TamA gene gene541 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02710 SH05_RS02715 SH05_02710 SH05_RS02715 560959 564738 + translocation and assembly module TamB gene gene542 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02715 SH05_RS02720 SH05_02715 SH05_RS02720 564741 565082 + gamma-glutamylcyclotransferase YtfP gene gene543 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02720 SH05_RS02725 SH05_02720 SH05_RS02725 565294 565545 + antitoxin ChpS part of the toxin-antitoxin ChpB-ChpS system gene gene544 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02725 SH05_RS02730 SH05_02725 SH05_RS02730 565539 565889 + mRNA interferase ChpB toxin of the ChpB-ChpS toxin-antitoxin system gene gene545 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02730 SH05_RS02735 SH05_02730 SH05_RS02735 565969 566499 - inorganic pyrophosphatase catalyzes the hydrolysis of pyrophosphate to phosphate gene gene546 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02735 SH05_RS02740 SH05_02735 SH05_RS02740 566809 567765 + ABC transporter substrate-binding protein gene gene547 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02740 SH05_RS02745 SH05_02740 SH05_RS02745 567905 569407 + sugar ABC transporter ATPase gene gene548 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02745 SH05_RS02750 SH05_02745 SH05_RS02750 569421 570443 + sugar ABC transporter permease gene gene549 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02750 SH05_RS02755 SH05_02750 SH05_RS02755 570430 571425 + ABC transporter permease membrane component of a putative sugar ABC transporter system gene gene550 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02755 SH05_RS02760 SH05_02755 SH05_RS02760 571458 572456 - fructose 1%2C6-bisphosphatase catalyzes the formation of D-fructose 6-phosphate from fructose-1%2C6-bisphosphate gene gene551 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02760 SH05_RS02765 SH05_02760 SH05_RS02765 572632 574005 + UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2%2C6-diaminoheptandioate ligase ligates L-alanyl-gamma-D-glutamyl-meso-diaminopimelate to UDP-N-acetylmuramic acid for reincorporation into peptidoglycan gene gene552 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02765 SH05_RS02770 SH05_02765 SH05_RS02770 574161 574712 - ribosome-associated UPF0307 family protein gene gene553 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02770 SH05_RS02775 SH05_02770 pmbA pmbA 574806 576158 + metalloprotease PmbA protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD gene gene554 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02775 SH05_RS02780 SH05_02775 SH05_RS02780 576337 576702 + cytochrome B562 electron transport protein gene gene555 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02780 SH05_RS02785 SH05_02780 SH05_RS02785 576747 577211 - anaerobic ribonucleoside-triphosphate reductase-activating protein activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions gene gene556 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02785 SH05_RS02790 SH05_02785 SH05_RS02790 577369 579507 - anaerobic ribonucleoside-triphosphate reductase Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates gene gene557 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02790 SH05_RS02795 SH05_02790 SH05_RS02795 579901 581556 - trehalose-6-phosphate hydrolase gene gene558 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02795 SH05_RS02800 SH05_02795 SH05_RS02800 581606 583024 - PTS maltose transporter subunit IIBC phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel gene gene559 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02800 SH05_RS02805 SH05_02800 treR treR 583146 584093 - trehalose repressor regulates genes involved in trehalose metabolism%3B binds the intermediate trehalose-6-phosphate%3B binds a dimer%3B regulates treBC operon gene gene560 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02805 SH05_RS02810 SH05_02805 SH05_RS02810 584472 587168 + magnesium-translocating P-type ATPase P-type%3B involved in magnesium transport into the cytoplasm gene gene561 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02810 SH05_RS02815 SH05_02810 SH05_RS02815 587374 587760 - reactive intermediate/imine deaminase has endoribonuclease activity on mRNA gene gene562 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02815 SH05_RS02820 SH05_02815 SH05_RS02820 587833 588294 - aspartate carbamoyltransferase regulatory chain involved in the allosteric regulation of aspartate carbamoyltransferase gene gene563 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02820 SH05_RS02825 SH05_02820 SH05_RS02825 588307 589242 - aspartate carbamoyltransferase catalytic subunit gene gene564 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02825 SH05_RS02830 SH05_02825 SH05_RS02830 589246 589380 - pyrBI operon leader peptide gene gene565 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02830 SH05_RS02835 SH05_02830 SH05_RS02835 589360 589692 + hypothetical protein gene gene566 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02835 SH05_RS02840 SH05_02835 SH05_RS02840 589661 590056 - endoribonuclease L-PSP gene gene567 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02840 SH05_RS02845 SH05_02840 SH05_RS02845 590187 590900 - oxidoreductase gene gene568 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02845 SH05_RS02850 SH05_02845 SH05_RS02850 590971 591564 + transcriptional regulator gene gene569 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02850 SH05_RS02855 SH05_02850 SH05_RS02855 591709 592161 + DUF386 domain-containing protein gene gene570 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02855 SH05_RS02860 SH05_02855 SH05_RS02860 592284 594098 + SopA-central-domain-like hexapeptide repeat protein gene gene571 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02860 SH05_RS02865 SH05_02860 SH05_RS02865 594154 595158 - ornithine carbamoyltransferase chain I catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway gene gene572 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02865 SH05_RS02870 SH05_02865 SH05_RS02870 595320 595736 + regulator of ribonuclease activity B gene gene573 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02870 SH05_RS02875 SH05_02870 SH05_RS02875 595881 596384 - GNAT family acetyltransferase gene gene574 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02875 SH05_RS02880 SH05_02875 SH05_RS02880 596577 597773 + hypothetical protein gene gene575 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02880 SH05_RS02885 SH05_02880 SH05_RS02885 597829 600684 - valine--tRNA ligase gene gene576 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02885 SH05_RS02890 SH05_02885 SH05_RS02890 600684 601127 - DNA polymerase III subunit chi binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB gene gene577 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02890 SH05_RS02895 SH05_02890 SH05_RS02895 601287 602798 - cytosol aminopeptidase catalyzes the removal of N-terminal amino acids preferably from various peptides%3B a cyteinylglycinase%2C transcription regulator and site-specific recombination factor gene gene578 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02895 SH05_RS02900 SH05_02895 SH05_RS02900 603065 604165 + LPS export ABC transporter permease LptF with LptBGC is involved in lipopolysaccharide export gene gene579 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02900 SH05_RS02905 SH05_02900 SH05_RS02905 604165 605247 + LPS export ABC transporter permease LptG with LptABCF is involved in the transport of lipopolysaccharides gene gene580 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02905 SH05_RS02910 SH05_02905 SH05_RS02910 605408 606910 - DUF853 domain-containing protein gene gene581 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02910 SH05_RS02915 SH05_02910 SH05_RS02915 606988 607986 - transcriptional regulator gene gene582 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02915 SH05_RS02920 SH05_02915 SH05_RS02920 608053 609372 - gnt-II system L-idonate transporter gene gene583 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02920 SH05_RS02925 SH05_02920 SH05_RS02925 609434 610198 - gluconate 5-dehydrogenase Involved in the nonphosphorylative%2C ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate gene gene584 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02925 SH05_RS02930 SH05_02925 SH05_RS02930 610222 611253 - L-idonate 5-dehydrogenase (NAD(P)+) NAD-binding gene gene585 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02930 SH05_RS02935 SH05_02930 idnK idnK 611470 612033 + thermosensitive gluconokinase gene gene586 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02935 SH05_RS02940 SH05_02935 SH05_RS02940 612037 613056 - aldehyde reductase Ahr gene gene587 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02940 SH05_RS02945 SH05_02940 SH05_RS02945 613252 613336 + tRNA-Leu tRNA gene588 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02945 SH05_RS02950 SH05_02945 SH05_RS02950 613597 614787 + integrase gene gene589 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02950 SH05_RS02955 SH05_RS02955 SH05_RS02955 615073 615162 - nitrite extrusion protein 2 gene gene590 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02955 SH05_RS02960 SH05_02955 SH05_RS02960 615119 615484 + transposase represses IS2 gene transcription gene gene591 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02960 SH05_RS02965 SH05_02960 SH05_RS02965 615442 616347 + integrase gene gene592 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02965 SH05_RS02980 SH05_02975 SH05_RS02980 617905 618075 + hypothetical protein gene gene594 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02980 SH05_RS02985 SH05_02980 SH05_RS02985 618129 618350 + hypothetical protein gene gene595 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02985 SH05_RS02990 SH05_02985 SH05_RS02990 618779 618922 + hypothetical protein gene gene596 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02990 SH05_RS02995 SH05_02990 SH05_RS02995 618950 620278 - transposase gene gene597 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS02995 SH05_RS03000 SH05_02995 SH05_RS03000 620905 622122 + MFS transporter membrane protein gene gene598 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03000 SH05_RS03005 SH05_03000 SH05_RS03005 622134 623252 + oxidoreductase gene gene599 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03005 SH05_RS03010 SH05_03005 SH05_RS03010 623473 623730 - hypothetical protein gene gene600 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03010 SH05_RS03015 SH05_03010 SH05_RS03015 623753 623956 + hypothetical protein gene gene601 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03015 SH05_RS03020 SH05_03015 SH05_RS03020 624008 624310 + transposase gene gene602 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03020 SH05_RS03025 SH05_03020 SH05_RS03025 624313 625464 - transposase gene gene603 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03025 SH05_RS03030 SH05_03025 SH05_RS03030 625421 625789 - transposase gene gene604 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03030 SH05_RS03035 SH05_RS03035 SH05_RS03035 625805 626640 + transposase gene gene605 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03035 SH05_RS03040 SH05_03035 SH05_RS03040 626723 626980 + transporter gene gene606 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03040 SH05_RS03045 SH05_03040 SH05_RS03045 627537 628304 - Fe(3+) dicitrate transport ATP-binding protein FecE gene gene607 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03045 SH05_RS03050 SH05_03045 fecD fecD 628305 629261 - Fe(3+) dicitrate ABC transporter permease Ferric citrate binds FecA and is transported across the outer membrane while transmits a signal across the cytoplasmic membrane protein FecR. FecR transmits a signal across the membrane and activates the cytoplasmic FecI that directs the RNA polymerase to express the fecABCDE operon (which encodes the ferric citrate outer membrane receptor and the ferric citrate ABC transporter)%2C as well as fecIR. FecD is one of two (along with FecC) integral membrane protein components of the iron dicitrate ABC transporter. gene gene608 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03050 SH05_RS03055 SH05_03050 fecC fecC 629258 630256 - Fe(3+) dicitrate ABC transporter permease part of the FecBCDE citrate-dependent iron (III) transport system gene gene609 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03055 SH05_RS03060 SH05_03055 fecB fecB 630253 631155 - Fe(3+) dicitrate-binding periplasmic protein part of the ABC transporter involved in the uptake of citrate-dependent Fe(3+) gene gene610 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03060 SH05_RS03065 SH05_03060 SH05_RS03065 631200 633524 - fe(3+) dicitrate transporter fecA gene gene611 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03065 SH05_RS03070 SH05_03065 SH05_RS03070 633611 634564 - protein FecR with FecA forms the FecAR signal transduction system%3B ferric citrate binds FecA and transmits a signal across the outer membrane to FecR. FecR transmits a signal across the cytoplasmic membrane and activates the sigma 70 protein FecI that directs the RNA polymerase to express the fecABCDE operon gene gene612 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03070 SH05_RS03075 SH05_03070 SH05_RS03075 634561 635082 - RNA polymerase sigma factor FecI Member of the extracytoplasmic function sigma factors which are active under specific conditions%3B binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription%3B this sigma factor regulates the genes for iron dicitrate transport gene gene613 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03075 SH05_RS03080 SH05_03075 SH05_RS03080 635293 635493 - transposase gene gene614 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03080 SH05_RS03090 SH05_03085 SH05_RS03090 635862 636071 + transposase gene gene616 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03090 SH05_RS03095 SH05_03090 SH05_RS03095 636185 637171 - transcriptional regulator gene gene617 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03095 SH05_RS03100 SH05_03095 SH05_RS03100 637271 637441 - hypothetical protein gene gene618 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03100 SH05_RS03105 SH05_03100 SH05_RS03105 637518 638867 - transporter gene gene619 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03105 SH05_RS03110 SH05_03105 SH05_RS03110 638974 640941 - dehydratase gene gene620 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03110 SH05_RS03115 SH05_03110 SH05_RS03115 640952 641887 - 2-keto-3-deoxy-galactonate aldolase gene gene621 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03115 SH05_RS03120 SH05_03115 SH05_RS03120 641862 642650 - transcriptional regulator gene gene622 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03120 SH05_RS03125 SH05_03120 SH05_RS03125 642953 643735 - transcriptional regulator gene gene623 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03125 SH05_RS03130 SH05_03125 SH05_RS03130 643752 644384 - protein SgcE gene gene624 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03130 SH05_RS03135 SH05_03130 SH05_RS03135 644396 644827 - phosphotransferase enzyme IIA component gene gene625 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03135 SH05_RS03140 SH05_03135 SH05_RS03140 644958 645764 - nucleoside triphosphatase gene gene626 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03140 SH05_RS03145 SH05_03140 SH05_RS03145 645777 647090 - PTS system EIIC permease component gene gene627 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03145 SH05_RS03150 SH05_03145 SH05_RS03150 647102 647383 - PTS sugar transporter subunit IIB gene gene628 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03150 SH05_RS03155 SH05_03150 SH05_RS03155 647377 648498 - endoglucanase gene gene629 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03155 SH05_RS03160 SH05_03155 SH05_RS03160 649284 650030 - methyltransferase gene gene630 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03160 SH05_RS03165 SH05_03160 SH05_RS03165 650086 650631 - GNAT family acetyltransferase gene gene631 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03165 SH05_RS03170 SH05_03165 SH05_RS03170 650643 650900 - hypothetical protein gene gene632 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03170 SH05_RS03175 SH05_03170 SH05_RS03175 651391 651522 - hypothetical protein gene gene633 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03175 SH05_RS03180 SH05_03175 SH05_RS03180 651686 651895 + DNA helicase superfamily I gene gene634 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03180 SH05_RS03185 SH05_03180 SH05_RS03185 651862 652878 + hypothetical protein gene gene635 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03185 SH05_RS03190 SH05_03185 SH05_RS03190 653461 654441 - 9-O-acetyl-N-acetylneuraminic acid deacetylase gene gene636 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03190 SH05_RS03195 SH05_03190 SH05_RS03195 654506 655612 - N-acetylneuraminate epimerase gene gene637 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03195 SH05_RS03200 SH05_03195 SH05_RS03200 655632 656180 - porin gene gene638 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03200 SH05_RS03205 SH05_03200 SH05_RS03205 656720 656866 + hypothetical protein gene gene639 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03205 SH05_RS03210 SH05_RS03210 SH05_RS03210 657148 657543 - hypothetical protein gene gene640 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03210 SH05_RS03215 SH05_03210 SH05_RS03215 657804 658406 + type 1 fimbriae regulatory protein FimB gene gene641 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03215 SH05_RS03220 SH05_03215 SH05_RS03220 659146 659649 + transposase gene gene642 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03220 SH05_RS03225 SH05_03220 SH05_RS03225 659702 660256 + tyrosine recombinase inversion of on/off regulator of fimA gene gene643 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03225 SH05_RS03235 SH05_03230 fimA fimA 660730 661278 + type-1 fimbrial protein%2C A chain gene gene644 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03235 SH05_RS03240 SH05_03235 SH05_RS03240 661385 661882 + fimbrin fimI gene gene645 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03240 SH05_RS03245 SH05_03240 SH05_RS03245 661919 662644 + chaperone protein FimC gene gene646 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03245 SH05_RS03250 SH05_03245 SH05_RS03250 662711 665347 + outer membrane usher protein FimD gene gene647 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03250 SH05_RS03255 SH05_03250 SH05_RS03255 665357 665887 + protein FimF gene gene648 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03255 SH05_RS03260 SH05_03255 SH05_RS03260 665900 666403 + protein FimG gene gene649 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03260 SH05_RS03265 SH05_03260 SH05_RS03265 666423 667325 + protein FimH gene gene650 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03265 SH05_RS03270 SH05_03265 SH05_RS03270 667568 668911 - gluconate transporter gene gene651 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03270 SH05_RS03275 SH05_03270 SH05_RS03275 669069 669299 + hypothetical protein gene gene652 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03275 SH05_RS03280 SH05_03275 SH05_RS03280 669251 670435 + mannonate dehydratase catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate gene gene653 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03280 SH05_RS03285 SH05_03280 SH05_RS03285 670516 671976 + D-mannonate oxidoreductase gene gene654 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03285 SH05_RS03290 SH05_03285 SH05_RS03290 671998 672192 - hypothetical protein gene gene655 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03290 SH05_RS03295 SH05_03290 SH05_RS03295 672191 672964 + Uxu operon transcriptional regulator regulates the expression of uxuBA gene gene656 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03295 SH05_RS03300 SH05_03295 SH05_RS03300 673105 673935 - hypothetical protein gene gene657 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03300 SH05_RS03305 SH05_03300 SH05_RS03305 673853 674026 - hypothetical protein gene gene658 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03305 SH05_RS03315 SH05_03310 SH05_RS03315 674508 674642 + hypothetical protein gene gene659 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03315 SH05_RS03320 SH05_03315 iraD iraD 674608 675000 + anti-adapter protein IraD inhibitor of RssB activity in response to DNA damage%3B blocks degradation of stationary phase sigma factor RpoS gene gene660 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03320 SH05_RS03325 SH05_03320 SH05_RS03325 674993 675904 - transcriptional regulator gene gene661 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03325 SH05_RS03330 SH05_03325 SH05_RS03330 675969 677141 - isoaspartyl dipeptidase gene gene662 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03330 SH05_RS03335 SH05_03330 SH05_RS03335 677154 677615 - hypothetical protein gene gene663 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03335 SH05_RS03340 SH05_03335 SH05_RS03340 677612 678295 - nucleoside recognition pore and gate family inner membrane transporter gene gene664 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03340 SH05_RS03345 SH05_03340 SH05_RS03345 678545 679099 + RNA 2'-phosphotransferase in yeast cells this enzyme removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''-cyclic phosphate%3B functions in tRNA splicing%3B the function and substrate of bacterial enzymes in organisms that do not perform splicing is unknown gene gene665 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03345 SH05_RS03350 SH05_03345 SH05_RS03350 679112 680290 - DUF1228 family inner membrane MFS superfamily transporter gene gene666 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03350 SH05_RS03355 SH05_03350 SH05_RS03355 680358 681218 - SdiA-regulated family membrane-anchored protein%3B phytase-like esterase gene gene667 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03355 SH05_RS03360 SH05_03355 SH05_RS03360 681283 681540 - hypothetical protein gene gene668 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03360 SH05_RS03365 SH05_03360 SH05_RS03365 681537 682304 - 2-hydroxyglutaryl-CoA dehydratase activator gene gene669 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03365 SH05_RS03370 SH05_03365 SH05_RS03370 682314 683465 - 2-hydroxyglutaryl-CoA dehydratase gene gene670 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03370 SH05_RS03375 SH05_03370 SH05_RS03375 683581 684861 - zinc-type alcohol dehydrogenase-like protein gene gene671 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03375 SH05_RS03380 SH05_03375 SH05_RS03380 684902 686134 - multidrug resistance protein MdtM is involved in resistance to acriflavine%2C chloramphenicol%2C norfloxacin%2C ethidium bromide and TPP gene gene672 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03380 SH05_RS03385 SH05_RS03385 SH05_RS03385 686613 687533 + hypothetical protein gene gene673 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03385 SH05_RS03390 SH05_03385 SH05_RS03390 687777 689189 - transcriptional regulator gene gene674 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03390 SH05_RS03395 SH05_03390 SH05_RS03395 689366 689530 + DUF1127 domain-containing protein gene gene675 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03395 SH05_RS03400 SH05_03395 SH05_RS03400 689981 691546 + hypothetical protein gene gene676 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03400 SH05_RS03405 SH05_03400 SH05_RS03405 691750 694470 + hypothetical protein gene gene677 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03405 SH05_RS03410 SH05_03405 SH05_RS03410 694527 695603 - protein mcrC gene gene678 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03410 SH05_RS03415 SH05_03410 SH05_RS03415 695573 696952 - 5-methylcytosine-specific restriction enzyme B McrB protein together with McrC forms the McrBC restriction system%3B recognizes N4- and C5-methylcytosine (and 5-hydroxy-methylcytosines)%3B appears to act against 5-methylcytosine preceded by a purine residue gene gene679 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03415 SH05_RS03420 SH05_03415 SH05_RS03420 697114 697455 - hypothetical protein involved in the degradation of RNA%3B may be involved in the recycling of RNA during the SOS response gene gene680 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03420 SH05_RS03425 SH05_03420 SH05_RS03425 697683 699077 - type-1 restriction enzyme EcoKI specificity protein gene gene681 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03425 SH05_RS03430 SH05_03425 SH05_RS03430 699074 700663 - type I restriction enzyme EcoKI M protein gene gene682 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03430 SH05_RS03435 SH05_03430 SH05_RS03435 700864 704376 - type I restriction enzyme EcoKI R protein gene gene683 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03435 SH05_RS03440 SH05_03435 SH05_RS03440 704819 706024 - MFS transporter gene gene684 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03440 SH05_RS03445 SH05_03440 SH05_RS03445 706106 706729 + TetR family transcriptional regulator gene gene685 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03445 SH05_RS03450 SH05_RS03450 SH05_RS03450 706833 707402 + restriction endonuclease gene gene686 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03450 SH05_RS03455 SH05_03450 SH05_RS03455 707448 708404 - metal-binding GTPase gene gene687 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03455 SH05_RS03460 SH05_03455 SH05_RS03460 708415 708618 - hypothetical protein gene gene688 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03460 SH05_RS03465 SH05_03460 SH05_RS03465 708668 710818 - hypothetical protein gene gene689 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03465 SH05_RS03470 SH05_RS03470 SH05_RS03470 710863 711036 - hypothetical protein gene gene690 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03470 SH05_RS03475 SH05_03470 SH05_RS03475 711196 712851 + methyl-accepting chemotaxis protein I serine sensor receptor gene gene691 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03475 SH05_RS03480 SH05_03475 SH05_RS03480 712900 714261 - L-galactonate transporter gene gene692 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03480 SH05_RS03485 SH05_03480 SH05_RS03485 714476 715390 - transcriptional regulator gene gene693 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03485 SH05_RS03490 SH05_03485 SH05_RS03490 715529 716551 + L-galactonate-5-dehydrogenase gene gene694 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03490 SH05_RS03495 SH05_03490 SH05_RS03495 716689 718980 - phosphoglycerol transferase I catalyzes the transfer of phosphoglycerol to the glucan backbone gene gene695 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03495 SH05_RS03500 SH05_03495 SH05_RS03500 719234 719725 - hypothetical protein gene gene696 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03500 SH05_RS03505 SH05_03500 SH05_RS03505 719777 720514 - DNA replication protein DnaC acts to load the DnaB helicase onto the initiation site during DNA replication gene gene697 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03505 SH05_RS03510 SH05_03505 SH05_RS03510 720517 721056 - primosomal protein 1 This protein is required for primosome-dependent normal DNA replication%3B it is also involved in inducing stable DNA replication during SOS response. It forms%2C in concert with dnaB protein and other prepriming proteins dnaC%2C N%2C N'%2C N'' a prepriming protein complex on the specific site of the template DNA recognized by protein N' gene gene698 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03510 SH05_RS03515 SH05_03510 SH05_RS03515 721163 721636 - DUF3815 domain-containing protein gene gene699 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03515 SH05_RS03520 SH05_03515 SH05_RS03520 721627 722397 - hypothetical protein gene gene700 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03520 SH05_RS03525 SH05_03520 SH05_RS03525 723016 723741 + transcriptional regulator gene gene701 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03525 SH05_RS03530 SH05_03525 SH05_RS03530 723699 724376 + transcriptional activator protein BglJ regulator for the transport and utilization of the aromatic beta-glucosides arbutin and silicin gene gene702 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03530 SH05_RS03535 SH05_03530 SH05_RS03535 724414 725202 - ferric iron reductase FhuF gene gene703 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03535 SH05_RS03540 SH05_03535 SH05_RS03540 725304 725579 + hypothetical protein gene gene704 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03540 SH05_RS03545 SH05_03540 SH05_RS03545 725618 725704 - tRNA-Leu tRNA gene705 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03545 SH05_RS03550 SH05_03545 SH05_RS03550 725739 725825 - tRNA-Leu tRNA gene706 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03550 SH05_RS03555 SH05_03550 SH05_RS03555 725854 725940 - tRNA-Leu tRNA gene707 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03555 SH05_RS03560 SH05_03555 rsmC rsmC 726208 727239 - ribosomal RNA small subunit methyltransferase C 16S rRNA M2G1207 methyltransferase%3B one of many enzymes that modify bases of the ribosomal RNA%3B this enzyme methylates the G at position 1207 of the small ribosomal subunit gene gene708 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03560 SH05_RS03565 SH05_03560 SH05_RS03565 727342 727755 + DNA polymerase III subunit psi with the chi subunit binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB gene gene709 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03565 SH05_RS03570 SH05_03565 rimI rimI 727724 728170 + ribosomal-protein-alanine acetyltransferase alanine acetyltransferase that specifically acetylates ribosomal protein S18 gene gene710 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03570 SH05_RS03575 SH05_03570 SH05_RS03575 728185 728862 + pyrimidine 5'-nucleotidase YjjG manganese-dependent 5'-nucleotidase%3B specific for 5'-UMP%2C 5'-dUMP%2C and 5'-dTMP%3B member of haloacid dehalogenase (HAD)-like hydrolase superfamily gene gene711 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03575 SH05_RS03580 SH05_03575 prfC prfC 728953 730542 + peptide chain release factor 3 stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred%3B GDP/GTP-binding protein gene gene712 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03580 SH05_RS03585 SH05_03580 SH05_RS03585 730935 731540 + osmotically-inducible protein Y gene gene713 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03585 SH05_RS03590 SH05_03585 SH05_RS03590 731667 731828 + hypothetical protein gene gene714 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03590 SH05_RS03595 SH05_03590 SH05_RS03595 731950 733023 + hypothetical protein gene gene715 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03595 SH05_RS03600 SH05_03595 SH05_RS03600 733020 733799 + DNase gene gene716 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03600 SH05_RS03605 SH05_03600 SH05_RS03605 734219 735082 - glycine radical enzyme activase gene gene717 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03605 SH05_RS03610 SH05_03605 SH05_RS03610 735054 736604 - DUF3029 domain-containing protein gene gene718 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03610 SH05_RS03615 SH05_03610 SH05_RS03615 736656 736757 + hypothetical protein gene gene719 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03615 SH05_RS03620 SH05_03615 SH05_RS03620 736862 737641 + deoxyribose-phosphate aldolase catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate gene gene720 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03620 SH05_RS03625 SH05_03620 SH05_RS03625 737768 739090 + thymidine phosphorylase gene gene721 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03625 SH05_RS03630 SH05_03625 SH05_RS03630 739142 740365 + phosphopentomutase gene gene722 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03630 SH05_RS03635 SH05_03630 deoD deoD 740422 741141 + purine nucleoside phosphorylase catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate gene gene723 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03635 SH05_RS03640 SH05_03635 SH05_RS03640 741308 742639 + transcriptional regulator gene gene724 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03640 SH05_RS03645 SH05_03640 lplA lplA 742640 743656 - lipoate-protein ligase A Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl on the lipoate-dependent enzymes. Creates an amide linkage that joins the free carboxyl group of lipoic acid to the epsilon-amino group of a specific lysine residue in lipoyl domain of apoproteins gene gene725 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03645 SH05_RS03650 SH05_03645 SH05_RS03650 743684 744328 - protein Smp gene gene726 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03650 SH05_RS03655 SH05_03650 serB serB 744434 745402 + phosphoserine phosphatase catalyzes the formation of serine from O-phosphoserine gene gene727 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03655 SH05_RS03660 SH05_03655 SH05_RS03660 745451 746833 + DNA repair protein RadA Sms%3B stabilizes the strand-invasion intermediate during the DNA repair%3B involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents gene gene728 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03660 SH05_RS03665 SH05_03660 SH05_RS03665 746854 748086 + trifunctional NAD biosynthesis/regulator protein NadR catalyzes the formation of NAD(+) from nicotinamide ribonucleotide%3B catalyzes the formation of nicotinamide mononucleotide from nicotinamide riboside%3B also has a regulatory function gene gene729 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03665 SH05_RS03670 SH05_03665 SH05_RS03670 748120 748287 + transcriptional regulator gene gene730 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03670 SH05_RS03675 SH05_03670 SH05_RS03675 748394 750061 - energy-dependent translational throttle protein EttA ChvD%3B in Agrobacterium tumefaciens%2C mutations in both Walker boxes were found to affect virulence gene gene731 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03675 SH05_RS03680 SH05_03675 SH05_RS03680 750272 752209 + murein transglycosylase catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine residues in peptidoglycan gene gene732 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03680 SH05_RS03685 SH05_03680 SH05_RS03685 752299 752625 + Trp operon repressor When complexed with L-tryptophan it binds the operator region of the trp operon and prevents the initiation of transcription gene gene733 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03685 SH05_RS03690 SH05_03685 yjjX yjjX 752772 753284 - non-canonical purine NTP phosphatase pyrophosphatase%3B has activity against dUTP and dITP%3B the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226%3B in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of biofilms%3B in Escherichia coli overexpression of this gene leads to resistance to an HMP analog gene gene734 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03690 SH05_RS03695 SH05_03690 SH05_RS03695 753336 753983 + phosphoglycerate mutase GpmB catalyzes reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate gene gene735 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03695 SH05_RS03700 SH05_03695 SH05_RS03700 753980 754849 - right origin-binding protein AraC family%3B binds to the right arm of the replication origin oriC gene gene736 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03700 SH05_RS03705 SH05_03700 SH05_RS03705 755060 755533 + protein CreA gene gene737 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03705 SH05_RS03710 SH05_03705 SH05_RS03710 755546 756235 + two-component system response regulator response regulator in two-component regulatory system with CreC%3B CreB protein is phosphorylated by sensor protein phospho-CreC%3B involved in catabolic regulation gene gene738 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03710 SH05_RS03715 SH05_03710 SH05_RS03715 756235 757659 + two-component system sensor histidine kinase part of a two-component regulatory system with CreB or PhoB%3B involved in catabolic regulation gene gene739 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03715 SH05_RS03720 SH05_03715 SH05_RS03720 757717 759069 + protein CreD gene gene740 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03720 SH05_RS03725 SH05_03720 SH05_RS03725 759129 759845 - two-component system response regulator gene gene741 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03725 SH05_RS03730 SH05_03725 SH05_RS03730 759941 760081 + hypothetical protein gene gene742 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03730 SH05_RS03735 SH05_03730 SH05_RS03735 760481 761167 + methyltransferase member of the SPOUT superfamily of methyltransferases gene gene743 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03735 SH05_RS03740 SH05_03735 thrL thrL 761381 761446 + thr operon leader peptide involved in threonine biosynthesis%3B controls the expression of the thrLABC operon gene gene744 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03740 SH05_RS03745 SH05_03740 thrA thrA 761528 763990 + bifunctional aspartokinase/homoserine dehydrogenase 1 multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways gene gene745 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03745 SH05_RS03750 SH05_03745 SH05_RS03750 763992 764924 + homoserine kinase catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate gene gene746 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03750 SH05_RS03755 SH05_03750 SH05_RS03755 764925 766211 + threonine synthase gene gene747 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03755 SH05_RS03760 SH05_03755 SH05_RS03760 766279 766428 + hypothetical protein gene gene748 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03760 SH05_RS03765 SH05_03760 SH05_RS03765 766425 766721 + DUF2502 domain-containing protein gene gene749 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03765 SH05_RS03770 SH05_03765 SH05_RS03770 766874 767650 - hypothetical protein gene gene750 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03770 SH05_RS03775 SH05_03770 SH05_RS03775 767720 769150 - transporter gene gene751 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03775 SH05_RS03780 SH05_03775 SH05_RS03780 769429 770382 + transaldolase 1 gene gene752 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03780 SH05_RS03785 SH05_03780 mogA mogA 770497 771084 + molybdopterin adenylyltransferase forms a trimer%3B related to eukaryotic protein gephyrin%3B functions during molybdenum cofactor biosynthesis gene gene753 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03785 SH05_RS03790 SH05_03785 SH05_RS03790 771119 771685 - succinate-acetate/proton symporter SatP gene gene754 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03790 SH05_RS03795 SH05_03790 SH05_RS03795 771834 772547 - hypothetical protein gene gene755 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03795 SH05_RS03800 SH05_03795 SH05_RS03800 772573 772977 - hypothetical protein gene gene756 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03800 SH05_RS03805 SH05_03800 dnaK dnaK 773354 775270 + molecular chaperone DnaK heat shock protein 70%3B assists in folding of nascent polypeptide chains%3B refolding of misfolded proteins%3B utilizes ATPase activity to help fold%3B co-chaperones are DnaJ and GrpE%3B multiple copies in some bacteria gene gene757 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03805 SH05_RS03810 SH05_03805 SH05_RS03810 775359 776489 + molecular chaperone DnaJ chaperone Hsp40%3B co-chaperone with DnaK%3B Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins%2C also in an autonomous%2C dnaK-independent fashion gene gene758 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03810 SH05_RS03815 SH05_03810 SH05_RS03815 776636 777748 + transposase gene gene759 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03815 SH05_RS03820 SH05_03815 SH05_RS03820 777942 778094 - protein HokC gene gene760 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03820 SH05_RS03825 SH05_03820 nhaA nhaA 778680 779846 + Na+/H+ antiporter NhaA exports sodium by using the electrochemical proton gradient to allow protons into the cell%3B functions in adaptation to high salinity and alkaline pH%3B activity increases at higher pH%3B downregulated at acidic pH gene gene761 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03825 SH05_RS03830 SH05_03825 nhaR nhaR 779912 780811 + transcriptional regulator Na+/H+ antiporter regulatory protein%3B activates the genes nhaA and osmC gene gene762 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03830 SH05_RS03835 SH05_03830 SH05_RS03835 781002 781505 - transposase gene gene763 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03835 SH05_RS03840 SH05_03835 rpsT rpsT 782006 782269 - 30S ribosomal protein S20 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase gene gene764 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03840 SH05_RS03845 SH05_03840 SH05_RS03845 782372 782590 + hypothetical protein gene gene765 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03845 SH05_RS03850 SH05_03845 SH05_RS03850 782598 783539 + bifunctional riboflavin kinase/FMN adenylyltransferase gene gene766 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03850 SH05_RS03855 SH05_03850 ileS ileS 783582 786398 + isoleucine--tRNA ligase IleRS%3B catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile)%3B since isoleucine and other amino acids such as valine are similar%2C there are additional editing function in this enzyme%3B one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile)%3B there are two active sites%2C one for aminoacylation and one for editing%3B class-I aminoacyl-tRNA synthetase family type 1 subfamily%3B some organisms carry two different copies of this enzyme gene gene767 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03855 SH05_RS03860 SH05_03855 lspA lspA 786398 786892 + lipoprotein signal peptidase lipoprotein signal peptidase%3B integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis gene gene768 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03860 SH05_RS03865 SH05_03860 SH05_RS03865 787017 787466 + peptidyl-prolyl cis-trans isomerase rotamase%3B accelerates isomerization of the peptidyl prolyl bond%2C involved in the folding of proteases gene gene769 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03865 SH05_RS03870 SH05_03865 ispH ispH 787468 788418 + 4-hydroxy-3-methylbut-2-enyl diphosphate reductase catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP)%3B functions in the nonmevalonate isoprenoid biosynthesis pathway gene gene770 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03870 SH05_RS03875 SH05_03870 SH05_RS03875 788484 789398 + non-specific ribonucleoside hydrolase RihC catalyzes the hydrolysis of both purine and pyrimidine ribonucleosides gene gene771 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03875 SH05_RS03880 SH05_03875 SH05_RS03880 789565 790386 + 4-hydroxy-tetrahydrodipicolinate reductase catalyzes the reduction of 2%2C3-dihydrodipicolinate to 2%2C3%2C4%2C5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis gene gene772 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03880 SH05_RS03885 SH05_03880 SH05_RS03885 790428 790595 - hypothetical protein gene gene773 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03885 SH05_RS03890 SH05_03885 SH05_RS03890 790629 790724 - hypothetical protein gene gene774 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03890 SH05_RS03895 SH05_03890 SH05_RS03895 790842 791990 + carbamoyl-phosphate synthase small chain catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways%3B forms an octamer composed of four CarAB dimers gene gene775 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03895 SH05_RS03900 SH05_03895 carB carB 792008 795229 + carbamoyl-phosphate synthase large chain four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate%3B CarB is responsible for the amidotransferase activity gene gene776 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03900 SH05_RS03905 SH05_03900 SH05_RS03905 795277 795456 - hypothetical protein gene gene777 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03905 SH05_RS03910 SH05_03905 SH05_RS03910 795491 795886 + transcriptional activatory protein CaiF regulator of carnitine metabolism%3B induces the caiTABCDE and fixABCX operons gene gene778 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03910 SH05_RS03915 SH05_03910 SH05_RS03915 795972 796562 - carnitine operon protein CaiE involved in the synthesis of a cofactor required for carnitine dehydratase and carnitine racemase activities gene gene779 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03915 SH05_RS03920 SH05_03915 SH05_RS03920 796568 797353 - carnitinyl-CoA dehydratase catalyzes the dehydration of L-carnitinyl-CoA to crotonobetainyl-CoA gene gene780 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03920 SH05_RS03925 SH05_03920 caiC caiC 797462 799015 - crotonobetaine/carnitine-CoA ligase gene gene781 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03925 SH05_RS03930 SH05_03925 SH05_RS03930 799089 800306 - L-carnitine CoA-transferase catalyzes formation of L-carnitinyl-CoA by transfering the CoA moiety from gamma-butyrobetainyl-CoA%2C also catalyzes the formation of crotonobetainyl-CoA by transfer of CoA from gamma-butyrobetainyl-CoA or L-carnitinyl-CoA to crotonobetaine gene gene782 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03930 SH05_RS03935 SH05_03930 SH05_RS03935 800435 801577 - crotonobetainyl-CoA dehydrogenase catalyzes the reduction of crotonobetainyl-CoA to gamma-butyrobetainyl-CoA gene gene783 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03935 SH05_RS03940 SH05_03935 SH05_RS03940 801608 803122 - L-carnitine/gamma-butyrobetaine antiporter catalyzes the exchange of L-carnitine for gamma-butyrobetaine in carnitine metabolism gene gene784 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03940 SH05_RS03945 SH05_03940 SH05_RS03945 803594 804364 + protein FixA required for anaerobic carnitine reduction%2C may act to transfer electrons to crotonobetaine reductase gene gene785 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03945 SH05_RS03950 SH05_03945 SH05_RS03950 804379 805320 + protein FixB gene gene786 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03950 SH05_RS03955 SH05_03950 SH05_RS03955 805371 806657 + protein FixC FAD/NAD(P)-binding domain%3B possibly part of an electron transfer system required for anaerobic carnitine reduction gene gene787 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03955 SH05_RS03960 SH05_03955 SH05_RS03960 806654 806941 + ferredoxin-like protein FixX gene gene788 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03960 SH05_RS03965 SH05_03960 SH05_RS03965 806998 808329 + transporter gene gene789 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03965 SH05_RS03970 SH05_03965 SH05_RS03970 808437 808967 + glutathione-regulated potassium-efflux system ancillary protein KefF Required for full activity of KefC%2C a potassium-proton antiporter gene gene790 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03970 SH05_RS03975 SH05_03970 SH05_RS03975 808960 810822 + glutathione-regulated potassium-efflux system protein KefC transport system that facilitates potassium-efflux gene gene791 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03975 SH05_RS03980 SH05_03975 folA folA 811014 811493 + dihydrofolate reductase catalyzes the reduction of dihydrofolate to tetrahydrofolate gene gene792 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03980 SH05_RS03985 SH05_03980 apaH apaH 811571 812413 - diadenosine tetraphosphatase hydrolyzes P(1)%2CP(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP gene gene793 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03985 SH05_RS03990 SH05_03985 apaG apaG 812420 812797 - protein ApaG protein associated with Co2+ and Mg2+ efflux gene gene794 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03990 SH05_RS03995 SH05_03990 ksgA ksgA 812800 813621 - ribosomal RNA small subunit methyltransferase A in Escherichia coli this enzyme catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA%3B mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin%3B members of this protein family have secondary functions gene gene795 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS03995 SH05_RS04000 SH05_03995 pdxA pdxA 813618 814607 - 4-hydroxythreonine-4-phosphate dehydrogenase catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate) gene gene796 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04000 SH05_RS04005 SH05_04000 SH05_RS04005 814607 815893 - chaperone SurA Chaperone involved in the folding of extracytoplasmic proteins%2C especially OmpA%2C OmpF and LamB gene gene797 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04005 SH05_RS04010 SH05_04005 SH05_RS04010 815946 818300 - LPS-assembly protein LptD is involved in outer membrane permeability gene gene798 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04010 SH05_RS04015 SH05_04010 djlA djlA 818555 819370 + dnaJ-like protein DjlA functions as a co-chaperone with DnaK%3B involved in regulation of colanic acid capsule%3B inner membrane protein%3B dimerized via transmembrane domain%3B J-like domain is cytoplasmic and can functionally substitute for DnaJ%3B stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system gene gene799 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04015 SH05_RS04020 SH05_RS04020 SH05_RS04020 819665 820470 + UDP pyrophosphate phosphatase gene gene800 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04020 SH05_RS04025 SH05_04020 SH05_RS04025 820878 821537 - ribosomal large subunit pseudouridine synthase A catalyzes the synthesis of pseudouridine from uracil-746 in 23S ribosomal RNA and from uracil-32 in the anticodon stem and loop of transfer RNAs gene gene801 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04025 SH05_RS04030 SH05_04025 SH05_RS04030 821549 824455 - RNA polymerase-associated protein RapA transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP%2C when it is trapped or immobilized on tightly supercoiled DNA gene gene802 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04030 SH05_RS04035 SH05_04030 SH05_RS04035 824620 826971 - DNA polymerase II Has polymerase%2C DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C gene gene803 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04035 SH05_RS04040 SH05_04035 araD araD 827046 827741 - L-ribulose-5-phosphate 4-epimerase catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate%3B links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source gene gene804 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04040 SH05_RS04045 SH05_04040 SH05_RS04045 828026 829528 - L-arabinose isomerase catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism gene gene805 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04045 SH05_RS04050 SH05_04045 SH05_RS04050 829539 831239 - ribulokinase catalyzes the phosphorylation of ribulose to ribulose 5-phosphate gene gene806 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04050 SH05_RS04055 SH05_04050 SH05_RS04055 831578 832456 + arabinose operon regulatory protein positive and negative regulator%3B regulates the araBAD and araFGH operons and other genes involved in the transport and catabolism of L-arabinose gene gene807 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04055 SH05_RS04060 SH05_04055 SH05_RS04060 832542 833306 + hypothetical protein gene gene808 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04060 SH05_RS04065 SH05_04060 thiQ thiQ 833420 834118 - thiamine import ATP-binding protein ThiQ with TbpA and ThiP is part of the thiamine and TPP transport system gene gene809 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04065 SH05_RS04070 SH05_04065 thiP thiP 834102 835712 - thiamine ABC transporter permease permease%3B with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell%3B repressed in presence of exogenous thiamine gene gene810 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04070 SH05_RS04075 SH05_04070 tbpA tbpA 835688 836671 - thiamine-binding periplasmic protein part of the thiamine and TPP transport system tbpA-thiPQ gene gene811 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04075 SH05_RS04080 SH05_04075 SH05_RS04080 836835 838490 - transcriptional regulator activates sgrS under glucose-phosphate stress conditions gene gene812 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04080 SH05_RS04085 SH05_04080 SH05_RS04085 838579 838710 + inhibitor of glucose uptake gene gene813 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04085 SH05_RS04090 SH05_04085 SH05_RS04090 838812 839990 + sugar efflux transporter A gene gene814 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04090 SH05_RS04095 SH05_04090 leuD leuD 840039 840644 - 3-isopropylmalate dehydratase small subunit catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis%3B forms a heterodimer of LeuC/D gene gene815 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04095 SH05_RS04100 SH05_04095 SH05_RS04100 840655 842055 - 3-isopropylmalate dehydratase large subunit dehydratase component%2C catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate gene gene816 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04100 SH05_RS04105 SH05_04100 SH05_RS04105 842058 843149 - 3-isopropylmalate dehydrogenase gene gene817 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04105 SH05_RS04110 SH05_04105 SH05_RS04110 843149 844720 - 2-isopropylmalate synthase gene gene818 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04110 SH05_RS04115 SH05_04110 SH05_RS04115 844813 844899 - leu operon leader peptide involved in attenuation control of the leuABCD operon in leucine biosynthesis gene gene819 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04115 SH05_RS04120 SH05_04115 leuO leuO 845559 846503 + transcriptional regulator activator for leuABCD operon%3B member of LysR family of transcriptional activators gene gene820 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04120 SH05_RS04125 SH05_04120 SH05_RS04125 846821 848545 + acetolactate synthase isozyme 3 large subunit catalyzes the formation of 2-acetolactate from pyruvate%2C leucine sensitive gene gene821 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04125 SH05_RS04130 SH05_04125 ilvH ilvH 848548 849039 + acetolactate synthase isozyme 3 small subunit with IlvI catalyzes the formation of 2-acetolactate from pyruvate%2C the small subunit is required for full activity and valine sensitivity%3B E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates%2C valine sensitivity and affinity for cofactors%3B also known as acetolactate synthase 3 small subunit gene gene822 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04130 SH05_RS04135 SH05_04130 SH05_RS04135 849051 849137 + fruR/shl operon leader peptide gene gene823 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04135 SH05_RS04140 SH05_04135 SH05_RS04140 849219 850223 + catabolite repressor/activator binds D-fructose as an inducer%3B involved in regulation of operons for central pathways of carbon metabolism gene gene824 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04140 SH05_RS04145 SH05_04140 SH05_RS04145 850825 851283 + transcriptional regulator MraZ MraZ%3B UPF0040%3B crystal structure shows similarity to AbrB gene gene825 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04145 SH05_RS04150 SH05_04145 SH05_RS04150 851285 852226 + ribosomal RNA small subunit methyltransferase H gene gene826 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04150 SH05_RS04155 SH05_04150 SH05_RS04155 852223 852588 + cell division protein FtsL membrane bound cell division protein at septum containing leucine zipper motif gene gene827 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04155 SH05_RS04160 SH05_04155 SH05_RS04160 852604 854370 + peptidoglycan synthase FtsI penicillin-binding protein 3%3B transpeptidase involved in septal peptidoglycan synthesis gene gene828 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04160 SH05_RS04165 SH05_04160 murE murE 854357 855844 + UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2 6-diaminopimelate ligase involved in cell wall formation%3B peptidoglycan synthesis%3B cytoplasmic enzyme%3B catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate gene gene829 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04165 SH05_RS04170 SH05_04165 murF murF 855841 857199 + UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase gene gene830 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04170 SH05_RS04175 SH05_04170 mraY mraY 857193 858275 + phospho-N-acetylmuramoyl-pentapeptide transferase First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan gene gene831 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04175 SH05_RS04180 SH05_04175 murD murD 858278 859594 + UDP-N-acetylmuramoylalanine--D-glutamate ligase UDP-N-acetylmuramoylalanine--D-glutamate ligase%3B involved in peptidoglycan biosynthesis%3B cytoplasmic%3B catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation gene gene832 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04180 SH05_RS04185 SH05_04180 SH05_RS04185 859594 860838 + lipid II flippase FtsW gene gene833 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04185 SH05_RS04190 SH05_04185 murG murG 860835 861902 + UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase N-acetylglucosaminyl transferase%3B UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase%3B involved in cell wall formation%3B inner membrane-associated%3B last step of peptidoglycan synthesis gene gene834 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04190 SH05_RS04195 SH05_04190 SH05_RS04195 861956 863431 + UDP-N-acetylmuramate--L-alanine ligase gene gene835 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04195 SH05_RS04200 SH05_04195 ddl ddl 863424 864344 + D-alanine--D-alanine ligase B D-alanine--D-alanine ligase%3B DdlA%3B DdlB%3B cytoplasmic%3B catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis%3B there are two forms of this enzyme in Escherichia coli gene gene836 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04200 SH05_RS04205 SH05_04200 SH05_RS04205 864346 865176 + cell division protein FtsQ involved in septum formation gene gene837 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04205 SH05_RS04210 SH05_04205 ftsA ftsA 865173 866435 + cell division protein FtsA ATP-binding involved in recruitment of FtsK to Z ring%3B essential cell division protein%3B colocalizes with FtsZ through direct interaction to the septal ring structure%3B structurally similar to eukaryotic actin%3B binds directly to the cell membrane gene gene838 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04210 SH05_RS04215 SH05_04210 SH05_RS04215 866496 867647 + cell division protein FtsZ GTPase%3B similar structure to tubulin%3B forms ring-shaped polymers at the site of cell division%3B other proteins such as FtsA%2C ZipA%2C and ZapA%2C interact with and regulate FtsZ function gene gene839 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04215 SH05_RS04220 SH05_04215 lpxC lpxC 867748 868665 + UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase zinc-dependent%3B catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis gene gene840 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04220 SH05_RS04225 SH05_04220 SH05_RS04225 868896 869408 + secretion monitor secM translational pause allows for the initiation of secA translation gene gene841 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04225 SH05_RS04230 SH05_04225 secA secA 869470 872175 + protein translocase subunit SecA functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD/F/YajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B proteins in this cluster correspond SecA1%3B SecA2 is not essential and seems to play a role in secretion of a subset of proteins gene gene842 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04230 SH05_RS04235 SH05_04230 SH05_RS04235 872235 872624 + 8-oxo-dGTP diphosphatase gene gene843 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04235 SH05_RS04240 SH05_04235 SH05_RS04240 872755 872889 - hypothetical protein gene gene844 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04240 SH05_RS04245 SH05_04240 SH05_RS04245 872840 873037 - DNA gyrase inhibitor YacG inhibits supercoiling by DNA gyrase by binding to the GyrB subunit gene gene845 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04245 SH05_RS04250 SH05_04245 SH05_RS04250 873047 873790 - cell division protein ZapD gene gene846 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04250 SH05_RS04255 SH05_04250 coaE coaE 873790 874410 - dephospho-CoA kinase catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A%3B involved in coenzyme A biosynthesis gene gene847 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04255 SH05_RS04260 SH05_04255 SH05_RS04260 874635 875678 + GMP reductase catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate gene gene848 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04260 SH05_RS04265 SH05_04260 SH05_RS04265 875713 876915 - protein transport protein HofC gene gene849 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04265 SH05_RS04270 SH05_04265 SH05_RS04270 876905 878290 - protein transport protein HofB gene gene850 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04270 SH05_RS04275 SH05_04270 SH05_RS04275 878300 878740 - prepilin peptidase-dependent protein D gene gene851 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04275 SH05_RS04280 SH05_04275 SH05_RS04280 878762 878986 + hypothetical protein gene gene852 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04280 SH05_RS04285 SH05_04280 SH05_RS04285 878943 879836 - nicotinate-nucleotide pyrophosphorylase [carboxylating] catalyzes the formation of pyridine-2%2C3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide gene gene853 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04285 SH05_RS04290 SH05_04285 SH05_RS04290 879924 880475 + 1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD gene gene854 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04290 SH05_RS04295 SH05_04290 SH05_RS04295 880472 881326 + protein AmpE involved in regulation of beta-lactamase%3B putative signaling protein gene gene855 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04295 SH05_RS04300 SH05_04295 SH05_RS04300 881369 882739 - aromatic amino acid transporter gene gene856 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04300 SH05_RS04305 SH05_04300 pdhR pdhR 883283 884047 + pyruvate dehydrogenase complex repressor activates lctPRD operon%3B autoregulates itself through repression of pdhR-aceEF-lpdA operon%3B regulates pyruvate dehydrogenase complex gene gene857 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04305 SH05_RS04310 SH05_04305 aceE aceE 884208 886871 + pyruvate dehydrogenase E1 component E1 component%3B part of pyruvate dehydrogenase%3B forms a complex with DlaT and LpdC gene gene858 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04310 SH05_RS04315 SH05_04310 aceF aceF 886886 888778 + dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex E2 component of pyruvate dehydrogenase multienzyme complex%3B in Escherichia coli AceF contains three N-terminal lipoyl domains gene gene859 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04315 SH05_RS04320 SH05_04315 SH05_RS04320 889103 890527 + dihydrolipoyl dehydrogenase E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex%3B catalyzes the oxidation of dihydrolipoamide to lipoamide gene gene860 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04320 SH05_RS04325 SH05_04320 SH05_RS04325 890598 892451 - DUF3300 domain-containing protein gene gene861 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04325 SH05_RS04330 SH05_04325 SH05_RS04330 892806 895403 + aconitate hydratase 2 catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate gene gene862 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04330 SH05_RS04335 SH05_04330 SH05_RS04335 895579 895941 + hypothetical protein gene gene863 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04335 SH05_RS04340 SH05_04335 SH05_RS04340 895979 896773 - S-adenosylmethionine decarboxylase proenzyme S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine gene gene864 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04340 SH05_RS04345 SH05_04340 SH05_RS04345 896789 897655 - polyamine aminopropyltransferase gene gene865 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04345 SH05_RS04350 SH05_04345 SH05_RS04350 897761 898108 - PulS_OutS family protein gene gene866 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04350 SH05_RS04355 SH05_04350 SH05_RS04355 898274 899824 + blue copper oxidase CueO laccase%3B copper-stimulated phenoloxidase and ferroxidase which may be involved in copper detoxification gene gene867 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04355 SH05_RS04360 SH05_04355 SH05_RS04360 900026 902416 - quinoprotein glucose dehydrogenase quinoprotein glucose dehydrogenase%3B catalyzes the formation of D-glucono-1%2C5-lactone from D-glucose and ubiquinone gene gene868 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04360 SH05_RS04365 SH05_04360 SH05_RS04365 902622 903158 + hypoxanthine phosphoribosyltransferase catalyzes the formation of inosine monophosphate from hypoxanthine and 5-phospho-alpha-D-ribose 1-diphosphate gene gene869 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04365 SH05_RS04370 SH05_04365 SH05_RS04370 903199 903861 - carbonic anhydrase catalyzes the interconversion of bicarbonate and carbon dioxide gene gene870 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04370 SH05_RS04375 SH05_04370 SH05_RS04375 903970 904896 + ABC transporter ATPase gene gene871 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04375 SH05_RS04380 SH05_04375 SH05_RS04380 904893 905663 + inner membrane transport permease YadH gene gene872 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04380 SH05_RS04385 SH05_04380 SH05_RS04385 905768 906208 + PTS Enzyme IIA gene gene873 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04385 SH05_RS04390 SH05_04385 SH05_RS04390 906272 907501 + polysaccharide deacetylase lipoprotein gene gene874 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04390 SH05_RS04395 SH05_04390 SH05_RS04395 907505 907885 - aspartate 1-decarboxylase gene gene875 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04395 SH05_RS04400 SH05_04395 SH05_RS04400 908159 909061 + transposase gene gene876 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04400 SH05_RS04405 SH05_04400 panC panC 909135 909986 - pantothenate synthetase catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine gene gene877 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04405 SH05_RS04410 SH05_04405 panB panB 909998 910792 - 3-methyl-2-oxobutanoate hydroxymethyltransferase catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5%2C10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate gene gene878 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04410 SH05_RS04415 SH05_04410 SH05_RS04415 910906 912144 - fimbrial-like adhesin protein gene gene879 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04415 SH05_RS04420 SH05_04415 SH05_RS04420 912194 912790 - fimbrial-like adhesin protein gene gene880 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04420 SH05_RS04425 SH05_04420 SH05_RS04425 912817 913419 - fimbrial protein gene gene881 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04425 SH05_RS04430 SH05_04425 SH05_RS04430 913434 914003 - fimbrial-like adhesin protein gene gene882 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04430 SH05_RS04435 SH05_04430 SH05_RS04435 914020 916617 - outer membrane usher protein HtrE similar to the fimbrial usher protein PapC gene gene883 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04435 SH05_RS04440 SH05_04435 ecpD ecpD 916652 917392 - molecular chaperone EcpD gene gene884 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04440 SH05_RS04445 SH05_04440 SH05_RS04445 917490 918074 - fimbrial-like adhesin protein gene gene885 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04445 SH05_RS04450 SH05_04445 SH05_RS04450 918444 918923 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase catalyzes the formation of 2-amino-4-hydroxy-6-hydroxymethyl-7%2C8-dihydropteridine diphosphate from 2-amino-4-hydroxy-6-hydroxymethyl-7%2C8-dihydropteridine and ATP gene gene886 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04450 SH05_RS04455 SH05_04450 pcnB pcnB 918920 920284 - poly(A) polymerase I Polymerase that creates the 3' poly(A) tail found in some mRNA's gene gene887 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04455 SH05_RS04460 SH05_04455 SH05_RS04460 920377 921273 - glutamyl-Q tRNA(Asp) ligase this tRNA synthetase lacks the tRNA anticodon interaction domain%3B instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4%2C5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp%3B the modified tRNA does not bind elongation factor Tu gene gene888 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04460 SH05_RS04465 SH05_04460 dksA dksA 921340 921795 - RNA polymerase-binding transcription factor DksA gene gene889 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04465 SH05_RS04470 SH05_04465 SH05_RS04470 921973 922677 - sugar fermentation stimulation protein A gene gene890 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04470 SH05_RS04475 SH05_04470 SH05_RS04475 922692 923222 - RNA 2'%2C3'-cyclic phosphodiesterase catalyzes the ligation and cleavage of of 2'-5' linkages in RNA gene gene891 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04475 SH05_RS04480 SH05_04475 SH05_RS04480 923251 925725 + RNA helicase similar in sequence to the ATP-dependent RNA helicase HrpA gene gene892 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04480 SH05_RS04485 SH05_04480 SH05_RS04485 925728 925934 + hypothetical protein gene gene893 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04485 SH05_RS04490 SH05_04485 mrcB mrcB 925921 928455 + penicillin-binding protein 1B penicillin-binding protein 1b%3B contains transglycosylase and transpeptidase activity%3B major enzyme for peptidoglycan biosynthesis in Escherichia coli%3B transmembrane protein%3B forms dimers%3B three variants%2C one of which may be a degradation product%2C while the other appears to result from an alternative initiation site%2C are found within the cell gene gene894 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04490 SH05_RS04495 SH05_04490 SH05_RS04495 928675 929151 + hypothetical protein gene gene895 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04495 SH05_RS04500 SH05_04495 SH05_RS04500 929122 930027 - integrase gene gene896 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04500 SH05_RS04505 SH05_04500 SH05_RS04505 929985 930350 - transposase represses IS2 gene transcription gene gene897 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04505 SH05_RS04510 SH05_RS04510 SH05_RS04510 930443 932254 + ferrichrome transporter involved with the transport of ferrichrome across the outer membrane%3B binds the ferrichrome-iron ligand and interacts with the TonB protein gene gene898 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04510 SH05_RS04515 SH05_04510 SH05_RS04515 932305 933102 + iron(3+)-hydroxamate import ATP-binding protein FhuC part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter gene gene899 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04515 SH05_RS04520 SH05_04515 SH05_RS04520 933102 933992 + iron(3+)-hydroxamate-binding protein FhuD Part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter%3B binds to all hydroxamate siderophores gene gene900 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04520 SH05_RS04525 SH05_04520 SH05_RS04525 933989 935971 + iron(3+)-hydroxamate import system permease FhuB gene gene901 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04525 SH05_RS04530 SH05_04525 SH05_RS04530 936129 937409 - glutamate-1-semialdehyde 2%2C1-aminomutase Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway gene gene902 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04530 SH05_RS04535 SH05_04530 SH05_RS04535 937634 939055 + H+/Cl- exchange transporter ClcA Acts as an electrical shunt for an outwardly-directed proton pump that is linked to amino acid decarboxylation gene gene903 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04535 SH05_RS04540 SH05_04535 SH05_RS04540 939137 939481 + iron-sulfur cluster insertion protein ErpA essential respiratory protein A%3B may be involved in the transfer of iron-sulfur clusters%3B essential for growth using oxygen or alternate electron acceptors gene gene904 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04540 SH05_RS04545 SH05_04540 SH05_RS04545 939528 940151 - hypothetical protein gene gene905 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04545 SH05_RS04550 SH05_04545 SH05_RS04550 940189 940989 - vitamin B12-binding protein solute binding component of the vitamin B12 transport system BtuCDF gene gene906 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04550 SH05_RS04555 SH05_04550 SH05_RS04555 940982 941680 - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine gene gene907 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04555 SH05_RS04560 SH05_04555 dgt dgt 941764 943281 + deoxyguanosinetriphosphate triphosphohydrolase forms a homotetramer%3B requires magnesium for activity%3B catalyzes the hydrolysis of dGTP to form deoxyguanosine and triphosphate gene gene908 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04560 SH05_RS04565 SH05_04560 SH05_RS04565 943411 944835 + periplasmic serine endoprotease DegP protease Do%3B required at high temperature%3B degrades damaged proteins gene gene909 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04565 SH05_RS04570 SH05_04565 SH05_RS04570 944990 946147 + carbohydrate diacid regulator regulates the expression of the operons for the enzymes involved in galactarate%2C glucarate and glycerate utilization gene gene910 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04570 SH05_RS04575 SH05_04570 SH05_RS04575 946236 946622 - hypothetical protein gene gene911 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04575 SH05_RS04580 SH05_04575 SH05_RS04580 946784 947596 - phosphodiesterase YaeI gene gene912 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04580 SH05_RS04585 SH05_04580 dapD dapD 947650 948474 - 2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway gene gene913 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04585 SH05_RS04590 SH05_04585 SH05_RS04590 948505 951177 - uridylyltransferase catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein gene gene914 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04590 SH05_RS04595 SH05_04590 SH05_RS04595 951239 952033 - methionine aminopeptidase catalyzes the removal of N-terminal amino acids from peptides and arylamides%3B generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn%2C Fe%2C or Mn gene gene915 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04595 SH05_RS04600 SH05_04595 SH05_RS04600 952401 953126 + 30S ribosomal protein S2 gene gene916 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04600 SH05_RS04605 SH05_04600 tsf tsf 953384 954235 + elongation factor Ts EF-Ts%3B functions during elongation stage of protein translation%3B forms a dimer%3B associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu gene gene917 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04605 SH05_RS04610 SH05_04605 SH05_RS04610 954382 955107 + uridylate kinase gene gene918 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04610 SH05_RS04615 SH05_04610 frr frr 955399 955956 + ribosome-recycling factor Rrf%3B Frr%3B ribosome-recycling factor%3B release factor 4%3B RF4%3B recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G%3B A GTPase-dependent process results in release of 50S from 70S%3B inhibited by release factor RF-1%3B essential for viability%3B structurally similar to tRNAs gene gene919 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04615 SH05_RS04620 SH05_04615 SH05_RS04620 956048 957244 + 1-deoxy-D-xylulose 5-phosphate reductoisomerase catalyzes the formation of 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose-5-phosphate gene gene920 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04620 SH05_RS04625 SH05_04620 SH05_RS04625 957433 958191 + UDP pyrophosphate synthase catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate gene gene921 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04625 SH05_RS04630 SH05_04625 cdsA cdsA 958204 959061 + phosphatidate cytidylyltransferase catalyzes the synthesis of CDP-diglyceride from CTP and phosphatidate gene gene922 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04630 SH05_RS04635 SH05_04630 SH05_RS04635 959073 960425 + inner membrane zinc RIP metalloprotease%3B RpoE activator%2C by degrading RseA%3B cleaved signal peptide endoprotease catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response gene gene923 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04635 SH05_RS04640 SH05_04635 SH05_RS04640 960455 962887 + outer membrane protein assembly factor BamA part of a complex with YfgL%2C YfiO%2C and NlpB involved in outer membrane protein biosynthesis%3B involved in the assembly of outer membrane proteins gene gene924 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04640 SH05_RS04645 SH05_04640 SH05_RS04645 963009 963494 + chaperone protein Skp gene gene925 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04645 SH05_RS04650 SH05_04645 lpxD lpxD 963498 964523 + UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis gene gene926 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04650 SH05_RS04655 SH05_04650 SH05_RS04655 964628 965083 + 3-hydroxyacyl-ACP dehydratase gene gene927 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04655 SH05_RS04660 SH05_04655 SH05_RS04660 965087 965875 + acyl-ACP-UDP-N-acetylglucosamine O-acyltransferase catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis gene gene928 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04660 SH05_RS04665 SH05_04660 lpxB lpxB 965875 967023 + lipid-A-disaccharide synthase catalyzes the formation of lipid A disaccharide from UDP-2%2C3-diacylglucosamine and 2%2C3-diacylglucosamine-1-phosphate%2C lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM gene gene929 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04665 SH05_RS04670 SH05_04665 rnhB rnhB 967020 967616 + ribonuclease HII RNH2%3B RNase HII%3B binds manganese%3B endonuclease which specifically degrades the RNA of RNA-DNA hybrids gene gene930 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04670 SH05_RS04675 SH05_04670 dnaE dnaE 967653 971135 + DNA polymerase III subunit alpha catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time%3B main replicative polymerase gene gene931 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04675 SH05_RS04680 SH05_04675 SH05_RS04680 971148 972107 + acetyl-CoA carboxylase carboxyltransferase subunit alpha catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits%3B one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein gene gene932 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04680 SH05_RS04685 SH05_04680 SH05_RS04685 972206 974347 + lysine decarboxylase constitutive constitutive%3B catalyzes the formation of cadaverine from lysine gene gene933 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04685 SH05_RS04690 SH05_04685 SH05_RS04690 974404 974793 + lyase gene gene934 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04690 SH05_RS04695 SH05_04690 tilS tilS 974858 976156 + tRNA(Ile)-lysidine synthase Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU%3B ATP-dependent%3B responsible for modifying the wobble-base of the CAU anticodon of tRNAIle such that it exhibits proper recognition of the AUA codon rather than the AUG codon and is in turn properly recognized by isoleucyl-tRNA synthetase gene gene935 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04695 SH05_RS04700 SH05_04695 SH05_RS04700 976205 976465 - Rho-binding antiterminator Suppresses temperature-sensitive mutations in essential genes by modulating rho-dependent transcription termination gene gene936 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04700 SH05_RS04705 SH05_04700 SH05_RS04705 976452 976652 - hypothetical protein gene gene937 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04705 SH05_RS04710 SH05_04705 SH05_RS04710 976818 977363 + PDDEXK superfamily protein gene gene938 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04710 SH05_RS04715 SH05_04710 SH05_RS04715 977360 977782 + peptidyl-tRNA hydrolase ArfB gene gene939 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04715 SH05_RS04720 SH05_04715 SH05_RS04720 977796 978506 + lipoprotein NlpE gene gene940 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04720 SH05_RS04725 SH05_04720 SH05_RS04725 978706 979530 - endopeptidase gene gene941 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04725 SH05_RS04730 SH05_04725 SH05_RS04730 979584 981302 - proline--tRNA ligase catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro) gene gene942 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04730 SH05_RS04735 SH05_04730 SH05_RS04735 981414 982121 - tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA gene gene943 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04735 SH05_RS04740 SH05_04735 rcsF rcsF 982118 982522 - hypothetical protein gene gene944 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04740 SH05_RS04745 SH05_04740 metQ metQ 982640 983455 - D-methionine-binding lipoprotein MetQ gene gene945 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04745 SH05_RS04750 SH05_04745 SH05_RS04750 983495 984148 - methionine ABC transporter part of the MetNIQ methionine uptake system gene gene946 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04750 SH05_RS04755 SH05_04750 metN metN 984141 985172 - methionine import ATP-binding protein MetN part of the metNIQ transport system for methionine gene gene947 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04755 SH05_RS04760 SH05_04755 SH05_RS04760 985360 985935 + D-glycero-beta-D-manno-heptose-1%2C7-bisphosphate 7-phosphatase Converts the D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate gene gene948 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04760 SH05_RS04765 SH05_04760 SH05_RS04765 986296 987851 + 16S ribosomal RNA rRNA gene949 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04765 SH05_RS04770 SH05_04765 SH05_RS04770 987908 987984 + tRNA-Ile tRNA gene950 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04770 SH05_RS04775 SH05_04770 SH05_RS04775 988027 988102 + tRNA-Ala tRNA gene951 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04775 SH05_RS04780 SH05_04775 SH05_RS04780 988277 991206 + 23S ribosomal RNA rRNA gene952 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04780 SH05_RS04785 SH05_04780 SH05_RS04785 991285 991400 + 5S ribosomal RNA rRNA gene953 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04785 SH05_RS04790 SH05_04785 SH05_RS04790 991455 991531 + tRNA-Asp tRNA gene954 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04790 SH05_RS04795 SH05_04790 dkgB dkgB 991694 992497 + 2%2C5-diketo-D-gluconic acid reductase B catalyzes the reduction of 2%2C5-diketo-D-gluconic acid to 2-keto-L-gulonic acid gene gene955 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04795 SH05_RS04800 SH05_04795 SH05_RS04800 992494 993408 - LysR family transcriptional regulator gene gene956 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04800 SH05_RS04805 SH05_04800 SH05_RS04805 993649 994449 + endo/exonuclease/phosphatase gene gene957 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04805 SH05_RS04810 SH05_04805 SH05_RS04810 994453 995076 + S-adenosyl-L-methionine-dependent methyltransferase gene gene958 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04810 SH05_RS04815 SH05_04810 mltD mltD 995124 996482 - murein transglycosylase catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues%3B may play a role in recycling muropeptides during cell division and/or cell elongation%3B in Helicobacter pylori MltD is a endolytic transglycosylase involved mainly in the rearrangement of the peptidoglycan layer of the bacterial cell wall gene gene959 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04815 SH05_RS04820 SH05_04815 SH05_RS04820 996554 997309 - hydroxyacylglutathione hydrolase catalyzes the hydrolysis of S-D-lactoylglutathione to D-lactic acid and reduced glutathione%3B plays an important role in cellular detoxification using glutathione gene gene960 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04820 SH05_RS04825 SH05_04820 SH05_RS04825 997343 998065 + S-adenosyl-L-methionine-dependent methyltransferase gene gene961 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04825 SH05_RS04830 SH05_04825 SH05_RS04830 998062 998529 - ribonuclease HI%2C degrades RNA of DNA-RNA hybrids gene gene962 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04830 SH05_RS04835 SH05_04830 SH05_RS04835 998585 999325 + DNA polymerase III subunit epsilon 3'-5' exonuclease of DNA polymerase III gene gene963 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04835 SH05_RS04840 SH05_04835 SH05_RS04840 999458 999534 + tRNA-Asp tRNA gene964 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04840 SH05_RS04845 SH05_04840 SH05_RS04845 999862 1000647 + lipoprotein gene gene965 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04845 SH05_RS04850 SH05_04845 SH05_RS04850 1000784 1001263 - hypothetical protein gene gene966 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04850 SH05_RS04855 SH05_04850 SH05_RS04855 1001273 1001611 - hypothetical protein gene gene967 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04855 SH05_RS04860 SH05_RS04860 SH05_RS04860 1001663 1001905 + transposase gene gene968 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04860 SH05_RS04865 SH05_04860 SH05_RS04865 1001946 1002716 - hydrolase YafV NAD(P)-binding gene gene969 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04865 SH05_RS04870 SH05_04865 SH05_RS04870 1002897 1003343 + hypothetical protein inactivates vertebrate C-type lysozyme gene gene970 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04870 SH05_RS04875 SH05_04870 fadE fadE 1003386 1005830 - acyl-CoA dehydrogenase functions in fatty acid oxidation%3B converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA gene gene971 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04875 SH05_RS04880 SH05_04875 gmhA gmhA 1006070 1006648 + phosphoheptose isomerase catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate gene gene972 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04880 SH05_RS04885 SH05_04880 SH05_RS04885 1006854 1007621 + glutamine amidotransferase gene gene973 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04885 SH05_RS04890 SH05_04885 SH05_RS04890 1007592 1008332 - transpeptidase gene gene974 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04890 SH05_RS04895 SH05_04890 SH05_RS04895 1008488 1008766 - mRNA interferase YafQ gene gene975 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04895 SH05_RS04900 SH05_04895 SH05_RS04900 1008769 1009029 - antitoxin DinJ DNA-damage-inducible protein J%3B antitoxin of YafQ-DinJ toxin-antitoxin system gene gene976 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04900 SH05_RS04905 SH05_04900 SH05_RS04905 1009239 1009988 + endopeptidase gene gene977 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04905 SH05_RS04910 SH05_04905 SH05_RS04910 1010164 1010661 + transposase gene gene978 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04910 SH05_RS04915 SH05_04910 SH05_RS04915 1010885 1012624 - flagellar biosynthesis protein FlhA gene gene979 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04915 SH05_RS04920 SH05_04915 SH05_RS04920 1012584 1013354 + hypothetical protein gene gene980 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04920 SH05_RS04925 SH05_04920 SH05_RS04925 1013425 1014480 + DNA polymerase IV involved in translesion DNA polymerization with beta clamp of polymerase III%3B belongs to Y family of polymerases%3B does not contain proofreading function gene gene981 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04925 SH05_RS04930 SH05_04925 SH05_RS04930 1014532 1014825 + antitoxin YafN gene gene982 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04930 SH05_RS04935 SH05_04930 SH05_RS04935 1014828 1015226 + mRNA interferase YafO YafO overproduction induces toxicity%3B it is believed to be the toxin of a toxin-antitoxin pair%3B unknown function gene gene983 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04935 SH05_RS04940 SH05_04935 SH05_RS04940 1015314 1015688 + acyltransferase gene gene984 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04940 SH05_RS04945 SH05_04940 SH05_RS04945 1015994 1016260 + hypothetical protein gene gene985 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04945 SH05_RS04950 SH05_04945 prfH prfH 1016172 1016729 + peptide chain release factor similar to release factor 1 and 2 gene gene986 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04950 SH05_RS04955 SH05_04950 SH05_RS04955 1016786 1018243 - cytosol non-specific dipeptidase catalyzes the hydrolysis of Xaa-His dipeptides gene gene987 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04955 SH05_RS04960 SH05_04955 SH05_RS04960 1018504 1018962 + xanthine phosphoribosyltransferase catalyzes the conversion of guanine%2C xanthine and%2C to a lesser extent%2C hypoxanthine to GMP%2C XMP and IMP%2C respectively gene gene988 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04960 SH05_RS04965 SH05_04960 frsA frsA 1019054 1020298 + esterase forms a 1:1 complex with the unphosphorylated from of enzyme IIAGlc%3B FrsA may promote fermentation gene gene989 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04965 SH05_RS04970 SH05_04965 SH05_RS04970 1020356 1020757 + sigma factor-binding protein Crl involved in the expression of csgBA which is involved in curli formation%3B interacts with sigmaS gene gene990 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04970 SH05_RS04975 SH05_04970 SH05_RS04975 1020796 1021851 - outer membrane pore protein E gene gene991 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04975 SH05_RS04980 SH05_04975 SH05_RS04980 1022139 1023242 + glutamate 5-kinase gene gene992 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04980 SH05_RS04985 SH05_04980 SH05_RS04985 1023254 1024507 + gamma-glutamyl phosphate reductase gene gene993 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04985 SH05_RS04990 SH05_04985 SH05_RS04990 1024622 1024697 + tRNA-Thr tRNA gene994 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04990 SH05_RS04995 SH05_04990 SH05_RS04995 1025079 1025420 - toxin YkfI gene gene995 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS04995 SH05_RS05000 SH05_04995 SH05_RS05000 1025441 1025758 - antitoxin YafW gene gene996 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05000 SH05_RS05005 SH05_05000 SH05_RS05005 1026007 1026483 - UPF0758 protein YkfG gene gene997 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05005 SH05_RS05010 SH05_05005 SH05_RS05010 1026499 1026957 - hypothetical protein gene gene998 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05010 SH05_RS05015 SH05_05010 SH05_RS05015 1027055 1027294 - UPF0401 protein YkfF gene gene999 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05015 SH05_RS05020 SH05_05015 SH05_RS05020 1027371 1027838 - hypothetical protein gene gene1000 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05020 SH05_RS05025 SH05_05020 SH05_RS05025 1027861 1028304 - lipoprotein%2C inner membrane%3B degP regulator%3B CP4-6 prophage gene gene1001 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05025 SH05_RS05030 SH05_05025 SH05_RS05030 1028304 1028543 - membrane protein gene gene1002 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05030 SH05_RS05035 SH05_05030 SH05_RS05035 1028935 1029756 - UPF0380 protein YafZ gene gene1003 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05035 SH05_RS05040 SH05_05035 SH05_RS05040 1029848 1030711 - hypothetical protein gene gene1004 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05040 SH05_RS05045 SH05_05040 SH05_RS05045 1031040 1031933 - transcriptional regulator gene gene1005 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05045 SH05_RS05050 SH05_05045 SH05_RS05050 1032029 1032397 + transposase gene gene1006 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05050 SH05_RS05055 SH05_05050 SH05_RS05055 1032354 1033505 + transposase gene gene1007 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05055 SH05_RS05060 SH05_05055 SH05_RS05060 1033581 1034006 + DNA-binding protein gene gene1008 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05060 SH05_RS05065 SH05_RS05065 SH05_RS05065 1033936 1034304 - hypothetical protein gene gene1009 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05065 SH05_RS05070 SH05_05065 SH05_RS05070 1034219 1034644 - hypothetical protein gene gene1010 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05070 SH05_RS05075 SH05_RS05075 SH05_RS05075 1034613 1035742 + hypothetical protein gene gene1011 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05075 SH05_RS05080 SH05_05075 SH05_RS05080 1035852 1036832 - transposase gene gene1012 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05080 SH05_RS05085 SH05_05080 SH05_RS05085 1037076 1038479 + S-methylmethionine permease gene gene1013 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05085 SH05_RS05090 SH05_05085 SH05_RS05090 1038466 1039398 + homocysteine S-methyltransferase gene gene1014 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05090 SH05_RS05095 SH05_05090 fbpC fbpC 1039507 1040553 - Fe(3+) ions import ATP-binding protein FbpC Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import gene gene1015 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05095 SH05_RS05100 SH05_05095 SH05_RS05100 1040565 1040927 - iron ABC transporter permease gene gene1016 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05100 SH05_RS05105 SH05_05100 SH05_RS05105 1040929 1041432 - transposase gene gene1017 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05105 SH05_RS05110 SH05_05105 SH05_RS05110 1041351 1041626 - repressor TnpA gene gene1018 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05110 SH05_RS05115 SH05_05110 SH05_RS05115 1041775 1042113 - transposase gene gene1019 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05115 SH05_RS05120 SH05_05115 SH05_RS05120 1042136 1042486 - hypothetical protein gene gene1020 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05120 SH05_RS05125 SH05_05120 SH05_RS05125 1042580 1043722 - hypothetical protein gene gene1021 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05125 SH05_RS05130 SH05_05125 SH05_RS05130 1044029 1044937 + hypothetical protein gene gene1022 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05130 SH05_RS05135 SH05_05130 SH05_RS05135 1044952 1046919 + hypothetical protein gene gene1023 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05135 SH05_RS05140 SH05_05135 SH05_RS05140 1047146 1048528 + hypothetical protein uncharacterized member of the GPH family of galactose-pentose-hexuronide transporters gene gene1024 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05140 SH05_RS05145 SH05_05140 SH05_RS05145 1048540 1050150 + arabinosidase gene gene1025 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05145 SH05_RS05150 SH05_05145 SH05_RS05150 1050155 1050913 - transcriptional regulator gene gene1026 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05150 SH05_RS05155 SH05_05150 SH05_RS05155 1051052 1052056 - ornithine carbamoyltransferase chain F catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway gene gene1027 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05155 SH05_RS05160 SH05_05155 SH05_RS05160 1052400 1052903 - transposase gene gene1028 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05160 SH05_RS05165 SH05_05160 SH05_RS05165 1053251 1053982 + hypothetical protein gene gene1029 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05165 SH05_RS05170 SH05_05165 SH05_RS05170 1054073 1054699 - hypothetical protein gene gene1030 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05170 SH05_RS05175 SH05_05170 SH05_RS05175 1054971 1055669 - hypothetical protein gene gene1031 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05175 SH05_RS05180 SH05_05175 SH05_RS05180 1055696 1056550 - hypothetical protein gene gene1032 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05180 SH05_RS05185 SH05_05180 SH05_RS05185 1056669 1056893 - hypothetical protein gene gene1033 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05185 SH05_RS05190 SH05_05185 SH05_RS05190 1056890 1057330 - hypothetical protein gene gene1034 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05190 SH05_RS05195 SH05_05190 SH05_RS05195 1057447 1058772 - preprotein translocase gene gene1035 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05195 SH05_RS05200 SH05_05195 SH05_RS05200 1058929 1059005 + tRNA-Thr tRNA gene1036 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05200 SH05_RS05205 SH05_05200 SH05_RS05205 1059132 1059542 - hypothetical protein gene gene1037 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05205 SH05_RS05210 SH05_05205 SH05_RS05210 1059521 1060477 - moco insertion factor for PaoABC aldehyde oxidoreductase gene gene1038 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05210 SH05_RS05215 SH05_05210 SH05_RS05215 1060487 1062685 - PaoABC aldehyde oxidoreductase Moco-containing subunit gene gene1039 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05215 SH05_RS05220 SH05_05215 SH05_RS05220 1062682 1063638 - PaoABC aldehyde oxidoreductase FAD-containing subunit gene gene1040 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05220 SH05_RS05225 SH05_05220 SH05_RS05225 1063635 1064324 - PaoABC aldehyde oxidoreductase 2Fe-2S subunit gene gene1041 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05225 SH05_RS05230 SH05_05225 SH05_RS05230 1064742 1065356 + hypothetical protein gene gene1042 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05230 SH05_RS05235 SH05_05230 SH05_RS05235 1065604 1065933 - ferredoxin gene gene1043 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05235 SH05_RS05240 SH05_05235 SH05_RS05240 1066246 1066956 - fimbrial chaperone EcpE gene gene1044 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05240 SH05_RS05245 SH05_05240 SH05_RS05245 1066925 1068568 - hypothetical protein gene gene1045 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05245 SH05_RS05250 SH05_05245 SH05_RS05250 1068558 1071083 - usher protein EcpC gene gene1046 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05250 SH05_RS05255 SH05_05250 SH05_RS05255 1071109 1071777 - fimbrial chaperone EcpB gene gene1047 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05255 SH05_RS05260 SH05_05255 SH05_RS05260 1071835 1072422 - common pilus major fimbrillin subunit EcpA gene gene1048 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05260 SH05_RS05265 SH05_05260 SH05_RS05265 1072497 1073039 - LuxR family transcriptional regulator gene gene1049 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05265 SH05_RS05270 SH05_05265 SH05_RS05270 1073863 1074090 + hypothetical protein gene gene1050 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05270 SH05_RS05275 SH05_05270 rpmJ rpmJ 1074125 1074265 - 50S ribosomal protein L36 smallest protein in the large subunit%3B similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc%3B the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion%3B the proteins in this group do not have the motif gene gene1051 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05275 SH05_RS05280 SH05_05275 SH05_RS05280 1074265 1074528 - 50S ribosomal protein L31 type B gene gene1052 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05280 SH05_RS05285 SH05_05280 SH05_RS05285 1074892 1074993 - hypothetical protein gene gene1053 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05285 SH05_RS05290 SH05_05285 SH05_RS05290 1076108 1076995 + attachment protein gene gene1054 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05290 SH05_RS05295 SH05_05290 SH05_RS05295 1077042 1077341 + transposase gene gene1055 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05295 SH05_RS05300 SH05_05295 SH05_RS05300 1077338 1078204 + transposase gene gene1056 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05300 SH05_RS05305 SH05_05300 SH05_RS05305 1078201 1078887 - transcriptional regulator gene gene1057 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05305 SH05_RS05310 SH05_05305 SH05_RS05310 1079477 1080070 - protein RclC gene gene1058 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05310 SH05_RS05315 SH05_05310 SH05_RS05315 1080082 1080318 - reactive chlorine species (RCS) stress resistance periplasmic protein gene gene1059 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05315 SH05_RS05320 SH05_05315 SH05_RS05320 1080427 1081752 - pyridine nucleotide-disulfide oxidoreductase Involved in disulfide oxidoreductase activity and electron transport gene gene1060 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05320 SH05_RS05325 SH05_05320 SH05_RS05325 1081978 1082832 + transcriptional regulator gene gene1061 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05325 SH05_RS05330 SH05_05325 SH05_RS05330 1083359 1084078 + cysteine-rich LutA family protein%3B electron transport chain YkgEFG component gene gene1062 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05330 SH05_RS05335 SH05_05330 SH05_RS05335 1084089 1085516 + ferridoxin-like LutB family protein%3B electron transport chain YkgEFG component gene gene1063 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05335 SH05_RS05340 SH05_05335 SH05_RS05340 1085509 1086204 + LutC family protein%3B electron transport chain YkgEFG component gene gene1064 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05340 SH05_RS05345 SH05_05340 SH05_RS05345 1086278 1086400 - universal stress protein gene gene1065 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05345 SH05_RS05350 SH05_05345 SH05_RS05350 1086447 1087115 - hypothetical protein gene gene1066 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05350 SH05_RS05355 SH05_05350 SH05_RS05355 1087328 1088998 - oxygen-dependent choline dehydrogenase catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine gene gene1067 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05355 SH05_RS05360 SH05_05355 SH05_RS05360 1089012 1090484 - NAD/NADP-dependent betaine aldehyde dehydrogenase gene gene1068 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05360 SH05_RS05365 SH05_05360 SH05_RS05365 1090498 1091085 - transcriptional regulator HTH-type%3B bet1%3B Repressor involved in choline regulation of the bet genes gene gene1069 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05365 SH05_RS05370 SH05_05365 SH05_RS05370 1091214 1093247 + choline transporter proton-motive-force-driven choline transporter gene gene1070 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05370 SH05_RS05375 SH05_05370 SH05_RS05375 1093617 1093802 - hypothetical protein gene gene1071 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05375 SH05_RS05380 SH05_05375 SH05_RS05380 1094122 1095210 + cyclic di-GMP phosphodiesterase YahA gene gene1072 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05380 SH05_RS05385 SH05_05380 SH05_RS05385 1095252 1096184 - DNA-bindng transcriptional regulator gene gene1073 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05385 SH05_RS05390 SH05_05385 SH05_RS05390 1096276 1096773 - hypothetical protein gene gene1074 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05390 SH05_RS05395 SH05_05390 SH05_RS05395 1097031 1097636 + transcriptional regulator gene gene1075 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05395 SH05_RS05400 SH05_05395 SH05_RS05400 1097676 1098539 + DUF2877 domain-containing protein gene gene1076 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05400 SH05_RS05405 SH05_05400 SH05_RS05405 1098529 1100076 + NAD(P)-binding succinyl-CoA synthase gene gene1077 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05405 SH05_RS05410 SH05_05405 SH05_RS05410 1100076 1101494 + DUF1116 domain-containing protein gene gene1078 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05410 SH05_RS05415 SH05_05410 SH05_RS05415 1101544 1101840 + hypothetical protein gene gene1079 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05415 SH05_RS05420 SH05_05415 SH05_RS05420 1101916 1102866 + carbamate kinase-like protein YahI gene gene1080 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05420 SH05_RS05425 SH05_05420 SH05_RS05425 1102876 1104258 + metallo-dependent hydrolase domain deaminase metallo-dependent hydrolase superfamily%3B deaminase with metallo-dependent hydrolase domain gene gene1081 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05425 SH05_RS05430 SH05_05425 SH05_RS05430 1104635 1105684 + aldehyde reductase YahK gene gene1082 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05430 SH05_RS05435 SH05_05430 SH05_RS05435 1105927 1106742 + hypothetical protein gene gene1083 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05435 SH05_RS05440 SH05_05435 SH05_RS05440 1107155 1107400 + hypothetical protein gene gene1084 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05440 SH05_RS05445 SH05_05440 SH05_RS05445 1107417 1108049 - membrane protein gene gene1085 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05445 SH05_RS05450 SH05_05445 SH05_RS05450 1108235 1108510 + periplasmic protein%2C function unknown%2C YhcN family gene gene1086 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05450 SH05_RS05455 SH05_05450 SH05_RS05455 1108608 1110194 - propionate catabolism operon regulatory protein PrpR sigma-54 dependent activator family protein%3B activates the prpBCDE operon gene gene1087 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05455 SH05_RS05460 SH05_05455 prpB prpB 1110433 1111323 + methylisocitrate lyase catalyzes the formation of pyruvate and succinate from 2-methylisocitrate gene gene1088 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05460 SH05_RS05465 SH05_05460 SH05_RS05465 1111763 1112932 + 2-methylcitrate synthase catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate%3B also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity gene gene1089 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05465 SH05_RS05470 SH05_05465 prpD prpD 1112966 1114417 + 2-methylcitrate dehydratase functions in propionate metabolism%3B involved in isomerization of (2S%2C3S)-methylcitrate to (2R%2C3S)-methylisocitrate%3B also encodes minor aconitase or dehydratase activity%3B aconitase C gene gene1090 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05470 SH05_RS05475 SH05_05470 prpE prpE 1114457 1116343 + propionate--CoA ligase catalyzes the formation of propionyl-CoA using propionate as a substrate%3B PrpE from Ralstonia solanacearum can produce acetyl-%2C propionyl-%2C butyryl- and acrylyl-coenzyme A%2C and Salmonella enterica produces propionyl- and butyryl-coenzyme A%3B not expressed in Escherichia coli when grown on propionate/minimal media%3B ATP-dependent gene gene1091 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05475 SH05_RS05480 SH05_05475 codB codB 1116673 1117932 + cytosine permease gene gene1092 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05480 SH05_RS05485 SH05_05480 SH05_RS05485 1117922 1119205 + cytosine deaminase Catalyzes the deamination of cytosine to uracil and ammonia gene gene1093 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05485 SH05_RS05490 SH05_05485 SH05_RS05490 1119542 1120441 - transcriptional regulator controls the expression of the cynTSX operon involved in degrading and using cyanate as a sole nitrogen source gene gene1094 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05490 SH05_RS05495 SH05_05490 SH05_RS05495 1120550 1121209 + carbonic anhydrase gene gene1095 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05495 SH05_RS05500 SH05_05495 SH05_RS05500 1121240 1121710 + cyanate hydratase gene gene1096 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05500 SH05_RS05505 SH05_05500 cynX cynX 1121716 1122897 + cyanate transporter MFS transporter family member induced in the presence of cyanate as part of a 3 gene operon%3B not essential gene gene1097 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05505 SH05_RS05510 SH05_05505 lacA lacA 1123000 1123611 - galactoside O-acetyltransferase transfers acetyl group from acetyl-CoA to the 6-hydroxyl of galactopyranosides%3B exact physiological role is unknown gene gene1098 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05510 SH05_RS05515 SH05_05510 lacY lacY 1123677 1124930 - lactose permease lactose/proton symporter%3B mediates lactose/proton symport through the membrane by utilizing the proton gradient to drive transport of galactosides%3B member of major facilitator superfamily%3B functions as a monomer with 12 transmembrane segments gene gene1099 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05515 SH05_RS05520 SH05_05515 SH05_RS05520 1124824 1125612 - hypothetical protein gene gene1100 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05520 SH05_RS05525 SH05_05520 lacI lacI 1125735 1126694 - lac repressor transcriptional repressor of lac operon%3B forms a homotetramer as a dimer of dimers%3B binds specific sites in lac operon resulting in DNA looping between the operators%3B binds allolactose as inducer gene gene1101 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05525 SH05_RS05530 SH05_05525 SH05_RS05530 1126894 1127727 - mhp operon transcriptional activator activator of 3-phenylpropionic acid catabolism gene gene1102 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05530 SH05_RS05535 SH05_05530 mhpA mhpA 1127918 1129582 + 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase catalyzes the formation of 3-(2%2C3-dihydroxyphenyl)propionate from 3-(3-hydroxyphenyl)propionate gene gene1103 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05535 SH05_RS05540 SH05_05535 mhpB mhpB 1129584 1130528 + 2%2C3-dihydroxyphenylpropionate/2%2C3-dihydroxicinnamic acid 1%2C2-dioxygenase catalyzes the cleavage of 3-(2%2C3-dihydroxyphenyl) propionate into 2-hydroxy-6-oxonona-2%2C4-diene-1%2C9-dioate%3B part of the 3-phenylpropionic acid degradation pathway%3B member of the protocatechuate 4%2C5-dioxygenase family gene gene1104 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05540 SH05_RS05545 SH05_05540 SH05_RS05545 1130546 1131412 + 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase gene gene1105 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05545 SH05_RS05550 SH05_05545 SH05_RS05550 1131422 1132231 + 2-keto-4-pentenoate hydratase gene gene1106 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05550 SH05_RS05555 SH05_05550 SH05_RS05555 1132228 1133178 + acetaldehyde dehydrogenase catalyzes the formation of acetyl-CoA from acetalaldehyde gene gene1107 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05555 SH05_RS05560 SH05_05555 SH05_RS05560 1133175 1134188 + 4-hydroxy-2-oxovalerate aldolase catalyzes the formation of pyruvate and acetaldehyde from 4-hydroxy-2-ketovaleric acid%3B involved in the degradation of phenylpropionate gene gene1108 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05560 SH05_RS05565 SH05_05560 SH05_RS05565 1134766 1135977 + 3-(3-hydroxy-phenyl)propionate transporter gene gene1109 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05565 SH05_RS05570 SH05_05565 SH05_RS05570 1136079 1136618 + DUF2058 domain-containing protein gene gene1110 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05570 SH05_RS05575 SH05_05570 SH05_RS05575 1136842 1137675 - S-formylglutathione hydrolase FrmB gene gene1111 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05575 SH05_RS05580 SH05_05575 SH05_RS05580 1137769 1138878 - S-(hydroxymethyl)glutathione dehydrogenase catalyzes the formation of S-formylglutathione from S-(hydroxymethyl)glutathione%3B also catalyzes the formation of aldehyde or ketone from alcohols gene gene1112 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05580 SH05_RS05585 SH05_05580 SH05_RS05585 1138913 1139188 - transcriptional regulator formaldehyde-induced negative regulator of the frmRAB operon gene gene1113 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05585 SH05_RS05590 SH05_05585 SH05_RS05590 1139376 1140149 - outer membrane protein gene gene1114 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05590 SH05_RS05595 SH05_05590 SH05_RS05595 1140151 1140594 - transferase gene gene1115 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05595 SH05_RS05600 SH05_05595 SH05_RS05600 1140658 1141023 + transposase represses IS2 gene transcription gene gene1116 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05600 SH05_RS05605 SH05_05600 SH05_RS05605 1140981 1141886 + integrase gene gene1117 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05605 SH05_RS05610 SH05_05605 SH05_RS05610 1142046 1143242 - family 2 glycosyltransferase gene gene1118 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05610 SH05_RS05615 SH05_05610 SH05_RS05615 1143366 1143923 - PIG-L family deacetylase gene gene1119 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05615 SH05_RS05620 SH05_05615 tauA tauA 1144539 1145501 + taurine-binding periplasmic protein with TauB and TauC is responsible for taurine uptake. gene gene1120 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05620 SH05_RS05625 SH05_05620 tauB tauB 1145514 1146281 + taurine import ATP-binding protein TauB Part of the ABC transporter complex tauABC involved in taurine import gene gene1121 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05625 SH05_RS05630 SH05_05625 SH05_RS05630 1146278 1147105 + taurine ABC transporter permease gene gene1122 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05630 SH05_RS05635 SH05_05630 tauD tauD 1147102 1147953 + alpha-ketoglutarate-dependent taurine dioxygenase catalyzes the conversion of taurine (2-aminoethanesulfonate) to sulfite and aminoacetaldehyde concurrently with the conversion of alpha-ketoglutarate to succinate and carbon dioxide%3B non-heme iron oxidase%3B allows the use of taurine as an alternative sulfur source%3B forms homodimers gene gene1123 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05635 SH05_RS05640 SH05_05635 SH05_RS05640 1148060 1149034 - delta-aminolevulinic acid dehydratase gene gene1124 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05640 SH05_RS05645 SH05_05640 SH05_RS05645 1149204 1149455 - hypothetical protein gene gene1125 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05645 SH05_RS05650 SH05_RS05650 SH05_RS05650 1149558 1151084 + pertactin gene gene1126 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05650 SH05_RS05655 SH05_05650 SH05_RS05655 1151046 1151912 - transposase gene gene1127 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05655 SH05_RS05660 SH05_05655 SH05_RS05660 1151909 1152208 - transposase gene gene1128 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05660 SH05_RS05665 SH05_RS05665 SH05_RS05665 1152283 1153725 + pertactin gene gene1129 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05665 SH05_RS05670 SH05_05665 SH05_RS05670 1153813 1154436 + transcriptional regulator gene gene1130 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05670 SH05_RS05675 SH05_05670 SH05_RS05675 1154437 1155594 - D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH this protein has no known enzymatic function gene gene1131 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05675 SH05_RS05680 SH05_05675 SH05_RS05680 1155732 1155926 + hypothetical protein gene gene1132 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05680 SH05_RS05685 SH05_05680 SH05_RS05685 1155946 1157166 + peptide antibiotic transporter SbmA in Escherichia coli SbmA is involved in uptake of microcin J25%3B functions along with FhuA%2C TonB%2C and ExbB/D in this capacity%3B in Sinorhizobium meliloti%2C BacA is essential and required for symbiosis%3B defects appear to affect the cell envelope gene gene1133 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05685 SH05_RS05690 SH05_05685 SH05_RS05690 1157179 1158273 + microcin transporter gene gene1134 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05690 SH05_RS05695 SH05_05690 SH05_RS05695 1158332 1158640 - hypothetical protein gene gene1135 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05695 SH05_RS05700 SH05_05695 SH05_RS05700 1158900 1159112 + DUF2754 domain-containing protein gene gene1136 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05700 SH05_RS05705 SH05_05700 SH05_RS05705 1159136 1160230 - D-alanine--D-alanine ligase A gene gene1137 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05705 SH05_RS05710 SH05_05705 SH05_RS05710 1160311 1160511 + hypothetical protein gene gene1138 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05710 SH05_RS05715 SH05_05710 SH05_RS05715 1160693 1160953 + anti-adapter protein IraP RpoS stabilzer during Pi starvation%3B anti-adapter protein gene gene1139 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05715 SH05_RS05720 SH05_05715 SH05_RS05720 1161054 1162469 + alkaline phosphatase gene gene1140 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05720 SH05_RS05725 SH05_05720 SH05_RS05725 1162588 1162908 + phosphate starvation-inducible protein PsiF gene gene1141 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05725 SH05_RS05730 SH05_05725 adrA adrA 1163010 1164125 + diguanylate cyclase catalyzes the conversion of 2 GTP into c-di-GMP%3B adrA overexpression induces cellulose biosynthesis%2C cell adherence to abiotic surfaces and swimming and swarming motility%3B AdrA acts post-transcriptionally on the bcsABZC operon activating cellulose biosynthesis gene gene1142 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05730 SH05_RS05735 SH05_05730 SH05_RS05735 1164142 1164951 - pyrroline-5-carboxylate reductase catalyzes the formation of L-proline from pyrroline-5-carboxylate gene gene1143 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05735 SH05_RS05740 SH05_05735 SH05_RS05740 1165071 1165529 + hypothetical protein gene gene1144 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05740 SH05_RS05745 SH05_05740 aroL aroL 1165712 1166236 + shikimate kinase type II enzyme similar to type I but differentially regulated and with a lower Km%3B catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis gene gene1145 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05745 SH05_RS05750 SH05_05745 SH05_RS05750 1166286 1166477 + hypothetical protein gene gene1146 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05750 SH05_RS05755 SH05_05750 SH05_RS05755 1166508 1166705 + hypothetical protein gene gene1147 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05755 SH05_RS05760 SH05_05755 SH05_RS05760 1166735 1167412 + protein AroM gene gene1148 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05760 SH05_RS05765 SH05_05760 SH05_RS05765 1167484 1167768 + hypothetical protein gene gene1149 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05765 SH05_RS05770 SH05_05765 SH05_RS05770 1167976 1168257 + hypothetical protein gene gene1150 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05770 SH05_RS05775 SH05_05770 SH05_RS05775 1168415 1169326 - recombination-associated protein RdgC Required for efficient pilin antigenic variation gene gene1151 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05775 SH05_RS05780 SH05_05775 SH05_RS05780 1169451 1170359 + fructokinase catalyzes phosphorylation of fructose%3B cytosolic enzyme gene gene1152 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05780 SH05_RS05785 SH05_05780 SH05_RS05785 1170604 1171788 - protein AraJ member of the major facilitator superfamily (MFS) of transporters%3B unknown function%3B may be associated with transport or processing of arabinose polymers gene gene1153 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05785 SH05_RS05790 SH05_05785 SH05_RS05790 1171914 1175060 - nuclease SbcCD subunit C with SbcD cleaves DNA hairpin structures%3B also has 5' single-strand endonuclease activity gene gene1154 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05790 SH05_RS05795 SH05_05790 SH05_RS05795 1175057 1176259 - nuclease SbcCD subunit D with SbcC cleaves DNA hairpin structure%2C also has 5' single-strand endonuclease activity gene gene1155 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05795 SH05_RS05800 SH05_05795 SH05_RS05800 1176449 1177138 + two-component system response regulator two component response regulator for the phosphate regulon%3B PhoR phosphorylates PhoB gene gene1156 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05800 SH05_RS05805 SH05_05800 phoR phoR 1177196 1178491 + phosphate regulon sensor protein PhoR membrane-associated histidine protein kinase that phosphorylates phoB in response to environmental signals as part of the two-component phosphate regulatory system phoR/phoB gene gene1157 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05805 SH05_RS05810 SH05_05805 SH05_RS05810 1178898 1180217 + branched-chain amino acid transport system 2 carrier protein sodium:branched-chain amino acid symporter gene gene1158 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05810 SH05_RS05815 SH05_05810 proY proY 1180293 1181666 + proline-specific permease ProY cryptic permease that may be involved in the transport of proline across the inner membrane%3B in Salmonella typhimurium%2C the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation gene gene1159 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05815 SH05_RS05820 SH05_05815 SH05_RS05820 1181822 1183639 + maltodextrin glucosidase gene gene1160 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05820 SH05_RS05825 SH05_05820 SH05_RS05825 1183644 1184225 - ACP phosphodiesterase Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP gene gene1161 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05825 SH05_RS05830 SH05_05825 queA queA 1184318 1185388 + S-adenosylmethionine:tRNA ribosyltransferase-isomerase Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step gene gene1162 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05830 SH05_RS05835 SH05_05830 tgt tgt 1185444 1186571 + queuine tRNA-ribosyltransferase Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp%2C -Asn%2C -His and -Tyr) gene gene1163 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05835 SH05_RS05840 SH05_05835 yajC yajC 1186594 1186926 + preprotein translocase subunit YajC member of preprotein translocase%3B forms a heterotrimer with SecD and SecF%3B links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex gene gene1164 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05840 SH05_RS05845 SH05_05840 secD secD 1186954 1188801 + preprotein translocase subunit SecD part of the preprotein secretory system%3B when complexed with proteins SecF and YajC%2C SecDFyajC stimulates the proton motive force-driven protein translocation%2C and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane gene gene1165 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05845 SH05_RS05850 SH05_05845 SH05_RS05850 1188812 1189783 + protein translocase subunit SecF gene gene1166 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05850 SH05_RS05855 SH05_05850 SH05_RS05855 1189912 1190259 + hypothetical protein gene gene1167 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05855 SH05_RS05860 SH05_05855 SH05_RS05860 1190273 1190395 + hypothetical protein gene gene1168 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05860 SH05_RS05865 SH05_05860 SH05_RS05865 1190436 1191320 - nucleoside-specific channel-forming protein tsx receptor of phage T6 and colicin K%3B involved in the transfer of deoxyribo- and ribo-nucleotides across the outer membrane gene gene1169 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05865 SH05_RS05870 SH05_05865 SH05_RS05870 1191619 1192158 - lipoprotein gene gene1170 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05870 SH05_RS05875 SH05_05870 SH05_RS05875 1192309 1192758 + NrdR family transcriptional regulator gene gene1171 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05875 SH05_RS05880 SH05_05875 ribD ribD 1192762 1193865 + riboflavin biosynthesis protein RibD riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway%3B catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 5-amino-6-(5-phosphoribitylamino)uracil gene gene1172 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05880 SH05_RS05885 SH05_05880 ribH ribH 1193954 1194424 + 6%2C7-dimethyl-8-ribityllumazine synthase RibE%3B 6%2C7-diimethyl-8-ribityllumazine synthase%3B DMRL synthase%3B lumazine synthase%3B beta subunit of riboflavin synthase%3B condenses 5-amino-6-(1'-D)-ribityl-amino-2%2C4(1H%2C3H)-pyrimidinedione with L-3%2C4-dihydrohy-2-butanone-4-phosphate to generate 6%2C6-dimethyl-8-lumazine (DMRL)%3B riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12)%3B involved in the last steps of riboflavin biosynthesis%3B forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli%3B in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not gene gene1173 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05885 SH05_RS05890 SH05_05885 nusB nusB 1194444 1194863 + transcription antitermination protein NusB Regulates rRNA biosynthesis by transcriptional antitermination gene gene1174 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05890 SH05_RS05895 SH05_05890 SH05_RS05895 1194941 1195918 + thiamine-monophosphate kinase catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP gene gene1175 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05895 SH05_RS05900 SH05_05895 SH05_RS05900 1195896 1196414 + phosphatidylglycerophosphatase A hydrolyzes phosphatidylglycerophosphate to produce phosphatidylglycerol and phosphate gene gene1176 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05900 SH05_RS05905 SH05_05900 SH05_RS05905 1196468 1197442 - 2-carboxybenzaldehyde reductase gene gene1177 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05905 SH05_RS05910 SH05_05905 SH05_RS05910 1197622 1199484 - 1-deoxy-D-xylulose-5-phosphate synthase catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate gene gene1178 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05910 SH05_RS05915 SH05_05910 SH05_RS05915 1199509 1200408 - farnesyl-diphosphate synthase gene gene1179 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05915 SH05_RS05920 SH05_05915 SH05_RS05920 1200408 1200650 - exodeoxyribonuclease 7 small subunit catalyzes the bidirectional exonucleolytic cleavage of DNA gene gene1180 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05920 SH05_RS05925 SH05_05920 SH05_RS05925 1200856 1202304 + tRNA sulfurtransferase catalyzes the conversion of uridine to 4-thiouridinine tRNA%3B also required for the synthesis of the thiazole moiety gene gene1181 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05925 SH05_RS05930 SH05_05925 SH05_RS05930 1202358 1202948 - hypothetical protein gene gene1182 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05930 SH05_RS05935 SH05_05930 SH05_RS05935 1202911 1203822 - 2-dehydropantoate 2-reductase ketopantoate reductase%3B catalyzes the NADPH reduction of ketopantoate to pantoate%3B functions in pantothenate (vitamin B5) biosynthesis gene gene1183 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05935 SH05_RS05940 SH05_05935 SH05_RS05940 1203990 1204481 + nucleotide-binding protein nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ%3B the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription gene gene1184 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05940 SH05_RS05945 SH05_05940 SH05_RS05945 1204609 1205973 - transporter gene gene1185 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05945 SH05_RS05950 SH05_05945 SH05_RS05950 1206122 1207012 - protoheme IX farnesyltransferase converts protoheme IX and farnesyl diphosphate to heme O gene gene1186 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05950 SH05_RS05955 SH05_05950 SH05_RS05955 1207024 1207353 - cytochrome bo(3) ubiquinol oxidase subunit 4 gene gene1187 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05955 SH05_RS05960 SH05_05955 SH05_RS05960 1207353 1207967 - cytochrome bo(3) ubiquinol oxidase subunit 3 gene gene1188 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05960 SH05_RS05965 SH05_05960 SH05_RS05965 1207957 1209948 - cytochrome bo(3) ubiquinol oxidase subunit 1 gene gene1189 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05965 SH05_RS05970 SH05_05965 SH05_RS05970 1209970 1210917 - cytochrome bo(3) ubiquinol oxidase subunit 2 gene gene1190 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05970 SH05_RS05975 SH05_05970 ampG ampG 1211377 1212852 - muropeptide MFS transporter AmpG in Escherichia coli this protein is a permease involved in peptidoglycan recycling%3B member of major facilitator superfamily%3B MFS%3B inner membrane protein gene gene1191 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05975 SH05_RS05980 SH05_05975 SH05_RS05980 1212896 1213474 - hypothetical protein gene gene1192 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05980 SH05_RS05985 SH05_05980 SH05_RS05985 1213779 1214096 + protein BolA positive transcriptional regulator of morphogenetic pathway%3B controlling several genes involved in oxidative stress%2C acid stress%2C heat shock%2C osmotic shock%2C and carbon-starvation stress gene gene1193 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05985 SH05_RS05990 SH05_05985 SH05_RS05990 1214105 1214293 + hypothetical protein gene gene1194 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05990 SH05_RS05995 SH05_05990 SH05_RS05995 1214440 1215738 + trigger factor gene gene1195 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS05995 SH05_RS06000 SH05_05995 SH05_RS06000 1215984 1216607 + ATP-dependent Clp protease proteolytic subunit gene gene1196 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06000 SH05_RS06005 SH05_06000 clpX clpX 1216733 1218007 + ATP-dependent Clp protease ATP-binding subunit ClpX binds and unfolds substrates as part of the ClpXP protease gene gene1197 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06005 SH05_RS06010 SH05_06005 SH05_RS06010 1218195 1220549 + DNA-binding protein gene gene1198 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06010 SH05_RS06015 SH05_06010 SH05_RS06015 1220758 1221030 + DNA-binding protein HU-beta histone-like DNA-binding protein gene gene1199 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06015 SH05_RS06020 SH05_06015 SH05_RS06020 1221222 1223093 + peptidyl-prolyl cis-trans isomerase gene gene1200 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06020 SH05_RS06025 SH05_06020 SH05_RS06025 1223244 1223615 + hypothetical protein gene gene1201 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06025 SH05_RS06030 SH05_06025 SH05_RS06030 1223709 1224107 + long-chain acyl-CoA thioesterase FadM gene gene1202 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06030 SH05_RS06035 SH05_06030 SH05_RS06035 1224159 1224854 - 7-cyano-7-deazaguanine synthase YbaX%3B catalyzes the transformation of GTP to 7-cyano-7-deazaguanine (preQ0)%2C as one of the early reactions of quenosine biosynthesis%3B quenosine is a modified nucleoside that occurs at the wobble position of GUN anticodons in tRNAs for Asn%2C Asp%2C Tyr%2C and His gene gene1203 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06035 SH05_RS06040 SH05_06035 SH05_RS06040 1224919 1226619 - ABC transporter substrate-binding protein gene gene1204 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06040 SH05_RS06045 SH05_06040 SH05_RS06045 1226719 1227537 + HMP-PP phosphatase HMP-PP phosphatase%3B catalyzes the hydrolysis of 4-amino-2-methyl-5-hydroxymethylpyrimidine pyrophosphate (HMP-PP) to 4-amino-2-methyl-5-hydroxymethylpyrimidine phosphate (HMP-P) gene gene1205 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06045 SH05_RS06050 SH05_06045 SH05_RS06050 1227690 1228148 + transcriptional regulator gene gene1206 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06050 SH05_RS06055 SH05_06050 SH05_RS06055 1228178 1229950 + multidrug resistance-like ATP-binding protein MdlA gene gene1207 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06055 SH05_RS06060 SH05_06055 SH05_RS06060 1229943 1231724 + multidrug resistance-like ATP-binding protein MdlB gene gene1208 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06060 SH05_RS06065 SH05_06060 SH05_RS06065 1231905 1232243 + nitrogen regulatory protein P-II 2 indirectly regulates nitrogen metabolism%3B at high nitrogen levels P-II prevents the phosphorylation of NR-I%2C the transcriptional activator of the glutamine synthetase gene (glnA)%3B at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA gene gene1209 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06065 SH05_RS06070 SH05_06065 SH05_RS06070 1232273 1233559 + ammonia channel gene gene1210 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06070 SH05_RS06075 SH05_06070 SH05_RS06075 1233608 1234468 - acyl-CoA thioesterase 2 gene gene1211 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06075 SH05_RS06080 SH05_06075 SH05_RS06080 1234686 1235258 + hypothetical protein gene gene1212 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06080 SH05_RS06085 SH05_06080 SH05_RS06085 1235289 1235600 - methylated-DNA--protein-cysteine methyltransferase gene gene1213 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06085 SH05_RS06090 SH05_06085 SH05_RS06090 1235979 1236332 + DUF1428 domain-containing protein gene gene1214 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06090 SH05_RS06095 SH05_06090 SH05_RS06095 1236374 1237924 - cyclic-di-GMP phosphodiesterase gene gene1215 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06095 SH05_RS06100 SH05_06095 SH05_RS06100 1238088 1238558 - hypothetical protein gene gene1216 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06100 SH05_RS06105 SH05_06100 SH05_RS06105 1238674 1239225 - maltose O-acetyltransferase gene gene1217 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06105 SH05_RS06110 SH05_06105 SH05_RS06110 1239397 1239615 - hemolysin expression-modulating protein Hha with Hns involved in transcriptional regulation of hemolysin%3B non-specific DNA-binding protein which affects the production of multiple proteins gene gene1218 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06110 SH05_RS06115 SH05_06110 SH05_RS06115 1239641 1240015 - Hha toxicity modulator TomB gene gene1219 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06115 SH05_RS06120 SH05_06115 SH05_RS06120 1240561 1243710 - multidrug efflux RND transporter permease subunit gene gene1220 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06120 SH05_RS06125 SH05_06120 SH05_RS06125 1243733 1244926 - MexE family multidrug efflux RND transporter periplasmic adaptor subunit with AcrD and TolC forms a transport system involved in resistance to a number of compounds including lipophilic antibiotics gene gene1221 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06125 SH05_RS06130 SH05_06125 SH05_RS06130 1245068 1245715 + transcriptional regulator regulates the acrAB operon which is involved in susceptibility to dephalothin and cephaloridine gene gene1222 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06130 SH05_RS06135 SH05_06130 SH05_RS06135 1245843 1249205 + mechanosensitive channel MscK gene gene1223 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06135 SH05_RS06140 SH05_06135 SH05_RS06140 1249243 1249383 - hypothetical protein gene gene1224 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06140 SH05_RS06145 SH05_06140 SH05_RS06145 1249417 1249578 - DUF2496 domain-containing protein gene gene1225 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06145 SH05_RS06150 SH05_06145 SH05_RS06150 1249592 1250119 - primosomal replication protein N'' PriC%3B protein involved in DNA replication%3B part of the primosome%2C a protein complex required to restart stalled replication forks%3B binds the complex formed by PriA%2C PriB and DNA%3B PriC-dependent primosome requires a gap to restart DNA replication%3B stimulates Rep activity at stalled forks gene gene1226 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06150 SH05_RS06155 SH05_06150 SH05_RS06155 1250189 1250566 + hypothetical protein gene gene1227 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06155 SH05_RS06160 SH05_06155 SH05_RS06160 1250719 1251270 + adenine phosphoribosyltransferase catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis gene gene1228 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06160 SH05_RS06165 SH05_06160 SH05_RS06165 1251399 1253330 + DNA polymerase III subunit tau catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the tau chain serves as a scaffold to help in the dimerizaton of the alpha%2Cepsilon and theta core complex%3B the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA gene gene1229 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06165 SH05_RS06170 SH05_06165 SH05_RS06170 1253383 1253712 + nucleoid-associated protein gene gene1230 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06170 SH05_RS06175 SH05_06170 recR recR 1253712 1254317 + recombination protein RecR involved in a recombinational process of DNA repair%2C independent of the recBC complex gene gene1231 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06175 SH05_RS06180 SH05_06175 SH05_RS06180 1254427 1256301 + chaperone protein HtpG molecular chaperone gene gene1232 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06180 SH05_RS06185 SH05_06180 adk adk 1256482 1257126 + adenylate kinase essential enzyme that recycles AMP in active cells%3B converts ATP and AMP to two molecules of ADP gene gene1233 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06185 SH05_RS06190 SH05_06185 SH05_RS06190 1257362 1258324 + ferrochelatase gene gene1234 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06190 SH05_RS06195 SH05_06190 SH05_RS06195 1258321 1259280 - acetyl esterase gene gene1235 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06195 SH05_RS06200 SH05_06195 SH05_RS06200 1259432 1260736 + inosine-guanosine kinase catalyzes the formation of inosine/guanosine monophosphate from inosine or guanosine and ATP gene gene1236 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06200 SH05_RS06205 SH05_06200 SH05_RS06205 1260869 1262545 - hypothetical protein YbaL%3B member of the CPA-2 family of antiporters%3B uncharacterized protein gene gene1237 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06205 SH05_RS06210 SH05_06205 SH05_RS06210 1262783 1264003 - fosmidomycin resistance protein gene gene1238 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06210 SH05_RS06215 SH05_06210 ushA ushA 1264221 1265873 + protein UshA catalyzes the degradation of periplasmic UDP-glucose to uridine%2C glucose-1-phosphate and inorganic phosphate%3B specific for uridine nucleotides gene gene1239 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06215 SH05_RS06220 SH05_06215 SH05_RS06220 1265910 1266389 - cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK gene gene1240 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06220 SH05_RS06225 SH05_06220 SH05_RS06225 1266593 1267387 - TraB family protein gene gene1241 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06225 SH05_RS06230 SH05_06225 SH05_RS06230 1267525 1267866 + transcriptional regulator gene gene1242 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06230 SH05_RS06235 SH05_06230 copA copA 1268182 1270686 - copper-exporting P-type ATPase A gene gene1243 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06235 SH05_RS06240 SH05_06235 SH05_RS06240 1270948 1271880 + glutaminase 1 catalyzes the formation of glutamate from glutamine gene gene1244 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06240 SH05_RS06245 SH05_06240 SH05_RS06245 1271883 1273175 + transporter gene gene1245 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06245 SH05_RS06250 SH05_06245 SH05_RS06250 1273300 1273707 + transcriptional regulator activator of copper-responsive regulon genes gene gene1246 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06250 SH05_RS06255 SH05_06250 SH05_RS06255 1273708 1274166 - hypothetical protein gene gene1247 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06255 SH05_RS06260 SH05_06255 SH05_RS06260 1274163 1275080 - protein QmcA gene gene1248 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06260 SH05_RS06265 SH05_06260 SH05_RS06265 1275226 1275903 + iron export ATP-binding protein FetA gene gene1249 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06265 SH05_RS06270 SH05_06265 SH05_RS06270 1275890 1276669 + iron export permease FetB gene gene1250 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06270 SH05_RS06275 SH05_06270 SH05_RS06275 1276732 1277586 - molecular chaperone DnaK gene gene1251 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06275 SH05_RS06280 SH05_06275 SH05_RS06280 1277647 1278417 - oxidoreductase gene gene1252 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06280 SH05_RS06285 SH05_06280 SH05_RS06285 1278446 1279069 - multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 gene gene1253 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06285 SH05_RS06290 SH05_06285 SH05_RS06290 1279040 1279726 + ABC transporter ATP-binding protein gene gene1254 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06290 SH05_RS06295 SH05_06290 SH05_RS06295 1279723 1282137 + ABC transporter permease gene gene1255 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06295 SH05_RS06300 SH05_06295 SH05_RS06300 1282568 1286848 + RHS element protein gene gene1256 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06300 SH05_RS06305 SH05_06300 SH05_RS06305 1286888 1287256 + immunity protein gene gene1257 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06305 SH05_RS06310 SH05_06305 SH05_RS06310 1287256 1287966 + hypothetical protein gene gene1258 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06310 SH05_RS06315 SH05_06310 SH05_RS06315 1287947 1288207 + hypothetical protein gene gene1259 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06315 SH05_RS06320 SH05_06315 SH05_RS06320 1288952 1289323 - hypothetical protein gene gene1260 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06320 SH05_RS06325 SH05_06320 SH05_RS06325 1289439 1290533 - tRNA 2-selenouridine synthase catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA gene gene1261 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06325 SH05_RS06330 SH05_06325 SH05_RS06330 1290602 1291528 - HTH-type transcriptional activator AllS activator of the allDC-ylbA operon involved in allantoin utilization gene gene1262 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06330 SH05_RS06335 SH05_06330 SH05_RS06335 1291758 1292240 + ureidoglycolate lyase gene gene1263 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06335 SH05_RS06340 SH05_06335 SH05_RS06340 1292318 1293133 + transcriptional regulator regulates operons involved in the utilization of allantoin gene gene1264 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06340 SH05_RS06345 SH05_06340 SH05_RS06345 1293223 1295004 + glyoxylate carboligase catalyzes the formation of 2-hydroxy-3-oxopropanoate (tartronate semialdehyde) from two molecules of glyoxylate gene gene1265 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06345 SH05_RS06350 SH05_06345 SH05_RS06350 1295017 1295793 + hydroxypyruvate isomerase gene gene1266 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06350 SH05_RS06355 SH05_06350 SH05_RS06355 1295893 1296771 + 2-hydroxy-3-oxopropionate reductase NADH-dependent%3B catalyzed the reversible formation of glycerate from tartronate semialdehyde gene gene1267 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06355 SH05_RS06360 SH05_06355 SH05_RS06360 1296940 1298394 + allantoin transporter gene gene1268 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06360 SH05_RS06365 SH05_06360 SH05_RS06365 1298454 1299815 + allantoinase Plays a crucial role on both purine and pyrimidine metabolism gene gene1269 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06365 SH05_RS06370 SH05_06365 SH05_RS06370 1299872 1301173 + uracil/xanthine transporter gene gene1270 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06370 SH05_RS06375 SH05_06370 SH05_RS06375 1301195 1302340 + glycerate kinase gene gene1271 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06375 SH05_RS06380 SH05_06375 SH05_RS06380 1302550 1303353 - hypothetical protein gene gene1272 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06380 SH05_RS06385 SH05_06380 SH05_RS06385 1303364 1304599 - allantoate amidohydrolase gene gene1273 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06385 SH05_RS06390 SH05_06385 SH05_RS06390 1304621 1305670 - ureidoglycolate dehydrogenase (NAD+) catalyzes the formation of oxalurate from ureidoglycolate gene gene1274 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06390 SH05_RS06395 SH05_06390 SH05_RS06395 1305987 1307654 + protein FdrA multicopy suppressor of dominant negative ftsH mutations%3B putative acyl-CoA synthetase gene gene1275 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06395 SH05_RS06400 SH05_06395 SH05_RS06400 1307664 1308923 + DUF1116 domain-containing protein gene gene1276 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06400 SH05_RS06405 SH05_06400 SH05_RS06405 1308934 1309749 + anaerobic allantoin catabolic oxamate carbamoyltransferase%3B DUF2877 family protein gene gene1277 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06405 SH05_RS06410 SH05_06405 SH05_RS06410 1309746 1310639 + carbamate kinase reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP gene gene1278 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06410 SH05_RS06415 SH05_06410 SH05_RS06415 1310834 1311901 - N5-carboxyaminoimidazole ribonucleotide synthase gene gene1279 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06415 SH05_RS06420 SH05_06415 purE purE 1311898 1312407 - N5-carboxyaminoimidazole ribonucleotide mutase catalyzes the formation of 4-carboxy-5-aminoimidazole ribonucleotide from N5-carboxyaminoimidazole ribonucleotide gene gene1280 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06420 SH05_RS06425 SH05_06420 SH05_RS06425 1312525 1313247 - UDP-2%2C3-diacylglucosamine hydrolase catalyzes the formation of 2%2C3%3Ddiacylglucosamine 1-phosphate from UDP-2%2C3%3Ddiacylglucosamine gene gene1281 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06425 SH05_RS06430 SH05_06425 SH05_RS06430 1313250 1313744 - peptidyl-prolyl cis-trans isomerase gene gene1282 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06430 SH05_RS06435 SH05_06430 cysS cysS 1313918 1315303 + cysteine--tRNA ligase catalyzes a two-step reaction%3B charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA gene gene1283 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06435 SH05_RS06440 SH05_06435 SH05_RS06440 1315339 1315860 - hypothetical protein gene gene1284 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06440 SH05_RS06445 SH05_06440 SH05_RS06445 1315968 1316180 - ribosome-associated protein gene gene1285 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06445 SH05_RS06450 SH05_06445 SH05_RS06450 1316182 1317048 - bifunctional protein FolD gene gene1286 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06450 SH05_RS06455 SH05_06450 SH05_RS06455 1317519 1318061 + FimA homolog%2C function unknown gene gene1287 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06455 SH05_RS06460 SH05_06455 SH05_RS06460 1318281 1318973 + fimbrial chaperone SfmC gene gene1288 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06460 SH05_RS06465 SH05_06460 SH05_RS06465 1319004 1321607 + outer membrane usher protein SfmD gene gene1289 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06465 SH05_RS06470 SH05_06465 fimH fimH 1321649 1322626 + adhesin involved in the regulation of fimbriae length and mediates adhesion of type 1 fimbriae gene gene1290 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06470 SH05_RS06475 SH05_06470 SH05_RS06475 1322637 1323152 + FimA homolog%2C function unknown gene gene1291 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06475 SH05_RS06480 SH05_06475 SH05_RS06480 1323155 1323787 - fimbriae Z protein activates the production of the major fimbrae protein FimA gene gene1292 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06480 SH05_RS06485 SH05_06480 SH05_RS06485 1324030 1324106 + tRNA-Arg tRNA gene1293 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06485 SH05_RS06490 SH05_06485 SH05_RS06490 1324122 1325285 - integrase gene gene1294 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06490 SH05_RS06495 SH05_06490 SH05_RS06495 1325405 1325668 - exonuclease gene gene1295 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06495 SH05_RS06500 SH05_06495 SH05_RS06500 1325758 1325994 + replication protein gene gene1296 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06500 SH05_RS06505 SH05_06500 SH05_RS06505 1325991 1326086 + hypothetical protein gene gene1297 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06505 SH05_RS06510 SH05_06505 SH05_RS06510 1326149 1326448 + transposase gene gene1298 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06510 SH05_RS06515 SH05_06510 SH05_RS06515 1326445 1327311 + transposase gene gene1299 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06515 SH05_RS06520 SH05_RS06520 SH05_RS06520 1327342 1327554 + protein ren gene gene1300 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06520 SH05_RS06525 SH05_06520 SH05_RS06525 1327622 1327954 + multidrug SMR transporter gene gene1301 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06525 SH05_RS06530 SH05_06525 SH05_RS06530 1328002 1328151 + membrane protein gene gene1302 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06530 SH05_RS06535 SH05_06530 SH05_RS06535 1328209 1329735 + DLP12 prophage%3B recombinase gene gene1303 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06535 SH05_RS06540 SH05_06535 SH05_RS06540 1330200 1330751 + hypothetical protein gene gene1304 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06540 SH05_RS06545 SH05_06540 SH05_RS06545 1330761 1331558 + transcriptional regulator gene gene1305 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06545 SH05_RS06550 SH05_06545 SH05_RS06550 1331773 1332228 + DLP12 prophage%3B uncharacterized protein DLP12 prophage gene gene1306 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06550 SH05_RS06555 SH05_06550 SH05_RS06555 1332228 1332398 + protein NinE from lambdoid prophage DLP12 DLP12 prophage%3B conserved protein similar to phage 82 and lambda proteins gene gene1307 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06555 SH05_RS06560 SH05_06555 SH05_RS06560 1332391 1332681 + DLP12 prophage%3B uncharacterized protein gene gene1308 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06560 SH05_RS06565 SH05_06560 SH05_RS06565 1332678 1333040 + crossover junction endodeoxyribonuclease RusA gene gene1309 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06565 SH05_RS06570 SH05_06565 SH05_RS06570 1333037 1333177 + protein%2C DLP12 prophage gene gene1310 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06570 SH05_RS06575 SH05_06570 SH05_RS06575 1333263 1333646 + Antitermination protein Q homolog from lambdoid prophage DLP12 gene gene1311 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06575 SH05_RS06580 SH05_06575 SH05_RS06580 1333788 1334006 + hypothetical protein gene gene1312 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06580 SH05_RS06585 SH05_06580 SH05_RS06585 1334044 1335024 - transposase gene gene1313 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06585 SH05_RS06590 SH05_06585 SH05_RS06590 1335093 1335503 - DLP12 prophage%3B uncharacterized protein gene gene1314 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06590 SH05_RS06595 SH05_06590 SH05_RS06595 1335789 1335995 + DLP12 prophage%3B uncharacterized protein gene gene1315 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06595 SH05_RS06600 SH05_06595 SH05_RS06600 1336160 1336354 - DUF3950 domain-containing protein gene gene1316 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06600 SH05_RS06605 SH05_06600 SH05_RS06605 1336502 1336603 + DNA-packaging protein gene gene1317 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06605 SH05_RS06615 SH05_06610 SH05_RS06615 1336917 1337420 - transposase gene gene1318 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06615 SH05_RS06620 SH05_RS06620 SH05_RS06620 1337670 1338065 + hypothetical protein gene gene1319 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06620 SH05_RS06625 SH05_06620 SH05_RS06625 1338040 1338783 + tail assembly protein gene gene1320 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06625 SH05_RS06630 SH05_06625 SH05_RS06630 1338838 1339269 - SAM-dependent methyltransferase gene gene1321 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06630 SH05_RS06635 SH05_RS06635 SH05_RS06635 1339561 1339821 + phage tail protein gene gene1322 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06635 SH05_RS06640 SH05_06635 SH05_RS06640 1340367 1341116 + transcriptional regulator gene gene1323 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06640 SH05_RS06645 SH05_06640 SH05_RS06645 1341366 1342319 - protease 7 gene gene1324 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06645 SH05_RS06650 SH05_06645 SH05_RS06650 1342723 1342839 - hypothetical protein gene gene1325 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06650 SH05_RS06655 SH05_06650 SH05_RS06655 1342833 1343594 - porin thermoregulatory protein EnvY involved in the thermoregulation of ompA%2C ompC%2C lamB and envelope proteins gene gene1326 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06655 SH05_RS06660 SH05_06655 SH05_RS06660 1343777 1344667 - PRK09936 family protein gene gene1327 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06660 SH05_RS06665 SH05_06660 SH05_RS06665 1344668 1347640 - bacteriophage N4 adsorption protein A gene gene1328 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06665 SH05_RS06670 SH05_06665 nfrB nfrB 1347627 1349864 - bacteriophage N4 adsorption protein B gene gene1329 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06670 SH05_RS06675 SH05_06670 SH05_RS06675 1350014 1351456 - two-component system sensor histidine kinase gene gene1330 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06675 SH05_RS06680 SH05_06675 SH05_RS06680 1351446 1352129 - two-component system response regulator response regulator in two-component regulatory system with CusS%3B regulates the copper efflux system gene gene1331 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06680 SH05_RS06685 SH05_06680 SH05_RS06685 1352286 1353659 + cation efflux system protein CusC with CusA%2C CusB and CusF is part of a cation efflux system that mediates resistance to copper and silver gene gene1332 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06685 SH05_RS06690 SH05_06685 SH05_RS06690 1353817 1354149 + cation efflux system protein CusF gene gene1333 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06690 SH05_RS06695 SH05_06690 SH05_RS06695 1354165 1355388 + cation efflux system protein CusB with CusA%2C CusC and CusF is part of a cation efflux system that mediates resistance to copper and silver gene gene1334 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06695 SH05_RS06700 SH05_06695 SH05_RS06700 1355400 1358543 + cation efflux system protein CusA gene gene1335 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06700 SH05_RS06705 SH05_06700 SH05_RS06705 1358645 1360021 + phenylalanine-specific permease gene gene1336 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06705 SH05_RS06710 SH05_06705 SH05_RS06710 1360102 1361349 - miniconductance mechanosensitive channel YbdG gene gene1337 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06710 SH05_RS06715 SH05_06710 SH05_RS06715 1361457 1362110 - oxygen-insensitive NAD(P)H nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrofurazone%2C quinones and the anti-tumor agent CB1954%3B NAD(P)H-dependent%3B oxygen insensitive gene gene1338 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06715 SH05_RS06720 SH05_06715 SH05_RS06720 1362204 1362572 - DUF419 domain-containing protein gene gene1339 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06720 SH05_RS06725 SH05_06720 SH05_RS06725 1362637 1362885 - DUF1158 domain-containing protein gene gene1340 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06725 SH05_RS06730 SH05_06725 SH05_RS06730 1362951 1364069 - weak gamma-glutamyl:cysteine ligase gene gene1341 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06730 SH05_RS06735 SH05_06730 SH05_RS06735 1364081 1364230 + hypothetical protein gene gene1342 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06735 SH05_RS06740 SH05_06735 SH05_RS06740 1364522 1364674 + protein HokE gene gene1343 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06740 SH05_RS06745 SH05_06740 SH05_RS06745 1364751 1365863 + transposase gene gene1344 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06745 SH05_RS06750 SH05_06745 SH05_RS06750 1366145 1366774 - 4'-phosphopantetheinyl transferase gene gene1345 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06750 SH05_RS06755 SH05_06750 SH05_RS06755 1366940 1369180 - ferrienterobactin receptor Fep%3B Cbt%3B Cbr%3B FeuB%3B FepA%3B PfeA%3B IroN%3B BfeA%3B outer membrane receptor of ferric enterobactin and colicins B and D%3B interacts with the TonB-ExbBD complex which catalyzes the translocation of the siderophore to the periplasmic space gene gene1346 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06755 SH05_RS06760 SH05_06755 SH05_RS06760 1369423 1370625 + enterochelin esterase gene gene1347 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06760 SH05_RS06765 SH05_06760 SH05_RS06765 1370628 1370846 + enterobactin biosynthesis protein YbdZ gene gene1348 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06765 SH05_RS06770 SH05_06765 entF entF 1370843 1374724 + enterobactin synthase component F with EntB%2C EntD%2C and EntE forms the multienzyme complex enterobactin synthase%3B EntF is the serine activating enzyme which catalyzes the formation of the amide and ester bonds of the cyclic enterobactin gene gene1349 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06770 SH05_RS06775 SH05_06770 SH05_RS06775 1374940 1376073 + ferric enterobactin transporter FepE in Salmonella is responsible for long O-antigen polymerization%3B may be part of the ferric enterobactin transport system%3B necessary for enetrobactin uptake gene gene1350 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06775 SH05_RS06780 SH05_06775 SH05_RS06780 1376070 1376885 - ferric enterobactin transport ATP-binding protein FepC with FepBDE is involved in the transport of ferric enterobactin gene gene1351 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06780 SH05_RS06785 SH05_06780 SH05_RS06785 1376882 1377874 - ferric anguibactin ABC transporter permease with FepBCD is involved in the transport of ferric enterobactin gene gene1352 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06785 SH05_RS06790 SH05_06785 SH05_RS06790 1377871 1378875 - ferric anguibactin ABC transporter permease with FepBCG is involved in the transport of ferric enterobactin gene gene1353 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06790 SH05_RS06795 SH05_06790 SH05_RS06795 1378986 1380236 + enterobactin exporter EntS protein p43%3B inner membrane protein that exports enterobactin to the periplasmic space%3B member of the major facilitator superfamily (MFS) of transporters gene gene1354 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06795 SH05_RS06800 SH05_06795 SH05_RS06800 1380240 1381196 - ferrienterobactin-binding periplasmic protein with FepCDG is involved in the transport of ferric enterobactin gene gene1355 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06800 SH05_RS06805 SH05_06800 SH05_RS06805 1381571 1382746 + isochorismate synthase EntC gene gene1356 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06805 SH05_RS06810 SH05_06805 entE entE 1382756 1384366 + enterobactin synthase component E bifunctional 2%2C3-dihydroxybenzoate-AMP ligase/S-dihydroxybenzoyltransferase%3B activates the carboxylate group of 2%2C3-dihydroxy-benzoate forming (2%2C3-dihydroxybenzoyl)adenylate then catalyzes the acylation of holo-entB with 2%2C3-dihydroxy-benzoate adenylate gene gene1357 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06810 SH05_RS06815 SH05_06810 SH05_RS06815 1384380 1385237 + enterobactin synthase component B 2%2C3 dihydro-2%2C3 dihydroxybenzoate synthase%3B catalyzes the formation of 2%2C3 dihydro-2%2C3 dihydroxybenzoate and pyruvate from isochorismate%3B with Ent DEF is involved in enterobactin synthesis gene gene1358 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06815 SH05_RS06820 SH05_06815 SH05_RS06820 1385237 1385983 + 2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase catalyzes the formation of 2%2C3-dihydroxybenzoate from 2%2C3-dihydro-2%2C3-dihydroxybenzoate%3B involved in the biosynthesis of siderophores%2C enterobactin%2C bacillibactin or vibriobactin gene gene1359 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06820 SH05_RS06825 SH05_06820 SH05_RS06825 1385986 1386399 + proofreading thioesterase EntH required for efficient enterobactin production gene gene1360 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06825 SH05_RS06830 SH05_06825 SH05_RS06830 1386580 1388685 + carbon starvation protein A gene gene1361 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06830 SH05_RS06835 SH05_06830 SH05_RS06835 1388868 1389065 + hypothetical protein gene gene1362 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06835 SH05_RS06840 SH05_06835 SH05_RS06840 1389075 1390163 - oxidoreductase member of the iron-containing alcohol dehydrogenase family gene gene1363 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06840 SH05_RS06845 SH05_06840 SH05_RS06845 1390272 1391432 + methionine aminotransferase catalyzes the transfer of an amino moiety%3B preference for methionine followed by histidine and phenylalanine gene gene1364 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06845 SH05_RS06850 SH05_06845 SH05_RS06850 1391433 1392050 - hypothetical protein gene gene1365 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06850 SH05_RS06855 SH05_06850 SH05_RS06855 1392035 1393255 - PAPS reductase-like domain protein gene gene1366 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06855 SH05_RS06860 SH05_06855 SH05_RS06860 1393402 1394304 - transcriptional regulator gene gene1367 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06860 SH05_RS06865 SH05_06860 dsbG dsbG 1394513 1395259 - thiol:disulfide interchange protein DsbG Involved in disulfide bond formation gene gene1368 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06865 SH05_RS06870 SH05_06865 SH05_RS06870 1395631 1396194 + alkyl hydroperoxide reductase subunit C with AhpF catalyzes the conversion of alkyl hydroperoxides to their corresponding alcohols%3B AhpC reduced the hydroperoxide substrate gene gene1369 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06870 SH05_RS06875 SH05_06870 SH05_RS06875 1396439 1398004 + alkyl hydroperoxide reductase subunit F gene gene1370 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06875 SH05_RS06880 SH05_06875 SH05_RS06880 1398125 1398553 - universal stress protein G interacts with GroEL%3B is induced by starvation%2C heat shock and toxic agents gene gene1371 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06880 SH05_RS06885 SH05_06880 SH05_RS06885 1398774 1400012 + Zn-dependent NAD(P)-binding oxidoreductase gene gene1372 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06885 SH05_RS06890 SH05_RS06890 SH05_RS06890 1400016 1400204 - hypothetical protein gene gene1373 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06890 SH05_RS06895 SH05_06890 SH05_RS06895 1400243 1400653 - nucleoside diphosphate kinase regulator Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis%2C CTP for lipid synthesis%2C and GTP for protein elongation gene gene1374 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06895 SH05_RS06900 SH05_06895 SH05_RS06900 1400883 1401689 - ribonuclease I gene gene1375 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06900 SH05_RS06905 SH05_06900 SH05_RS06905 1401803 1403266 - citrate carrier involved in the transport of citrate into the cell along with the export of succinate out of the cell gene gene1376 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06905 SH05_RS06910 SH05_06905 citG citG 1403317 1404195 - 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase catalyzes the formation of 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA from ATP and 3-dephospho-CoA gene gene1377 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06910 SH05_RS06915 SH05_06910 citX citX 1404170 1404721 - apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 2'-(5''-phosphoribosyl)-3'-dephospho-CoA transferase%3B holo-citrate lyase synthase%3B CitG forms the prosthetic group precursor 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA which is then transferred to apo-ACP by CitX to produce holo-ACP and pyrophosphate gene gene1378 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06915 SH05_RS06920 SH05_06915 SH05_RS06920 1404725 1406257 - citrate lyase alpha chain citrate-ACP transferase%2C the alpha subunit catalyzes the formation of (3S)-citryl-CoA from acetyl-CoA and citrate gene gene1379 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06920 SH05_RS06925 SH05_06920 SH05_RS06925 1406268 1407176 - citrate lyase subunit beta citryl-ACP lyase%3B catalyzes the formation of acetate and oxaloacetate from citrate gene gene1380 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06925 SH05_RS06930 SH05_06925 SH05_RS06930 1407173 1407469 - citrate lyase ACP gene gene1381 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06930 SH05_RS06935 SH05_06930 SH05_RS06935 1407484 1408542 - [Citrate [pro-3S]-lyase] ligase activates citrate lyase by acetylation of the gamma subunit gene gene1382 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06935 SH05_RS06940 SH05_06935 dpiB dpiB 1408921 1410579 + sensor histidine kinase regulates the expression of citrate fermentation genes gene gene1383 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06940 SH05_RS06945 SH05_06940 dpiA dpiA 1410548 1411228 + transcriptional regulator regulates the expression of citrate fermentation genes gene gene1384 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06945 SH05_RS06950 SH05_06945 dcuC dcuC 1411269 1412654 - anaerobic C4-dicarboxylate transporter DcuC responsible for the transport of C4-dicarboxylates during anaerobic growth gene gene1385 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06950 SH05_RS06955 SH05_06950 pagP pagP 1413243 1413803 + lipid A palmitoyltransferase PagP catalyzes the transfer of palmitate to lipid A gene gene1386 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06955 SH05_RS06960 SH05_06955 SH05_RS06960 1413978 1414187 + cold-shock protein CspE gene gene1387 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06960 SH05_RS06965 SH05_06960 SH05_RS06965 1414241 1414624 - fluoride efflux channel%2C dual topology membrane protein camphor resistance protein CrcB%3B may be involved in chromosome condensation%3B overexpression in Escherichia coli protects against decondensation by camphor%3B overexpressing the protein results in an increase in supercoiling gene gene1388 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06965 SH05_RS06970 SH05_RS06970 SH05_RS06970 1414717 1415504 + hydrolase gene gene1389 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06970 SH05_RS06975 SH05_06970 tatE tatE 1415633 1415836 + preprotein translocase subunit TatE TatE%3B similar to TatA and found in some proteobacteria%3B part of system that translocates proteins with a conserved twin arginine motif across the inner membrane%3B capable of translocating folded substrates typically those with bound cofactors%3B similar to a protein import system in thylakoid membranes gene gene1390 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06975 SH05_RS06980 SH05_06975 SH05_RS06980 1415937 1416902 - lipoyl synthase catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group gene gene1391 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06980 SH05_RS06985 SH05_06980 SH05_RS06985 1417111 1418064 - LysR family transcriptional regulator gene gene1392 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06985 SH05_RS06990 SH05_06985 SH05_RS06990 1418122 1418271 + hypothetical protein gene gene1393 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06990 SH05_RS06995 SH05_06990 SH05_RS06995 1418323 1418964 - octanoyltransferase lipoyl/octanoyltransferase%3B catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein gene gene1394 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS06995 SH05_RS07000 SH05_06995 SH05_RS07000 1419065 1419328 - hypothetical protein gene gene1395 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07000 SH05_RS07005 SH05_07000 SH05_RS07005 1419438 1420649 - D-alanyl-D-alanine carboxypeptidase penicillin-binding protein 5%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors gene gene1396 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07005 SH05_RS07010 SH05_07005 SH05_RS07010 1420788 1421876 - hypothetical protein septal ring protein%2C suppressor of prc%2C minor lipoprotein gene gene1397 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07010 SH05_RS07015 SH05_07010 SH05_RS07015 1421887 1422999 - rod shape-determining protein RodA gene gene1398 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07015 SH05_RS07020 SH05_07015 SH05_RS07020 1423002 1424903 - penicillin-binding protein 2 gene gene1399 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07020 SH05_RS07025 SH05_07020 SH05_RS07025 1424934 1425401 - ribosomal RNA large subunit methyltransferase H gene gene1400 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07025 SH05_RS07030 SH05_07025 SH05_RS07030 1425405 1425722 - ribosome silencing factor RsfS gene gene1401 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07030 SH05_RS07035 SH05_07030 SH05_RS07035 1425982 1426593 - adenosylcobalamin/alpha-ribazole phosphatase gene gene1402 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07035 SH05_RS07040 SH05_07035 SH05_RS07040 1426617 1427258 - nicotinate-nucleotide adenylyltransferase gene gene1403 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07040 SH05_RS07045 SH05_07040 holA holA 1427260 1428291 - DNA polymerase III subunit delta required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA gene gene1404 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07045 SH05_RS07050 SH05_07045 SH05_RS07050 1428291 1428872 - hypothetical protein rare lipoprotein B%3B involved in the assembly of LPS in the outer membrane gene gene1405 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07050 SH05_RS07055 SH05_07050 leuS leuS 1428887 1431469 - leucine--tRNA ligase leucine--tRNA ligase%3B LeuRS%3B class-I aminoacyl-tRNA synthetase%3B charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA%3B due to the large number of codons that tRNA(Leu) recognizes%2C the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA%2C but instead recognition is dependent on a conserved discriminator base A37 and a long arm%3B an editing domain hydrolyzes misformed products%3B in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase gene gene1406 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07055 SH05_RS07060 SH05_07055 SH05_RS07060 1431704 1432186 + hypothetical protein gene gene1407 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07060 SH05_RS07065 SH05_07060 SH05_RS07065 1432256 1433233 - hypothetical protein gene gene1408 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07065 SH05_RS07070 SH05_07065 SH05_RS07070 1433397 1434104 + hypothetical protein gene gene1409 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07070 SH05_RS07075 SH05_07070 SH05_RS07075 1434101 1435528 + HscC co-chaperone%2C uncharacterized J domain-containing protein gene gene1410 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07075 SH05_RS07080 SH05_07075 SH05_RS07080 1435538 1436092 - hypothetical protein gene gene1411 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07080 SH05_RS07085 SH05_07080 SH05_RS07085 1436194 1436901 + DUF1266 domain-containing protein gene gene1412 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07085 SH05_RS07090 SH05_07085 SH05_RS07090 1436898 1438349 + J domain-containing HscC co-chaperone%3B Hsc56 gene gene1413 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07090 SH05_RS07095 SH05_07090 SH05_RS07095 1438409 1440079 - chaperone protein HscC gene gene1414 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07095 SH05_RS07100 SH05_07095 rihA rihA 1440163 1441098 - pyrimidine-specific ribonucleoside hydrolase RihA Hydrolyzes with equal efficiency cytidine or uridine to ribose and cytosine or uracil%2C respectively%3B pyrimidine-specific gene gene1415 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07100 SH05_RS07105 SH05_07100 artP artP 1441216 1441941 - glutamate/aspartate transport ATP-binding protein GltL With ArtMQJI transports arginine across the inner membrane gene gene1416 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07105 SH05_RS07110 SH05_07105 SH05_RS07110 1441941 1442615 - glutamate ABC transporter permease with GltJLPS and GadC for glutamate and GltJLP%2C DctA and DcuAB for aspartate is involved in the transport of glutamate and aspartate gene gene1417 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07110 SH05_RS07115 SH05_07110 SH05_RS07115 1442615 1443355 - glutamate ABC transporter permease with GltIKL is involved in the transport of glutamate and aspartate gene gene1418 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07115 SH05_RS07120 SH05_07115 SH05_RS07120 1443525 1444433 - glutamate/aspartate periplasmic-binding protein gene gene1419 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07120 SH05_RS07125 SH05_07120 SH05_RS07125 1444683 1445663 - transposase gene gene1420 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07125 SH05_RS07130 SH05_07125 lnt lnt 1446029 1447567 - apolipoprotein N-acyltransferase Transfers the fatty acyl group on membrane lipoproteins gene gene1421 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07130 SH05_RS07135 SH05_07130 SH05_RS07135 1447592 1448470 - magnesium and cobalt efflux protein CorC involved in the transport of magnesium and cobalt ions gene gene1422 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07135 SH05_RS07140 SH05_07135 SH05_RS07140 1448560 1449027 - endoribonuclease YbeY gene gene1423 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07140 SH05_RS07145 SH05_07140 SH05_RS07145 1449024 1450064 - phoH-like protein gene gene1424 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07145 SH05_RS07150 SH05_07145 SH05_RS07150 1450217 1451641 - tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A) gene gene1425 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07150 SH05_RS07155 SH05_07150 ubiF ubiF 1451787 1452962 + 2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol hydroxylase catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1%2C4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol%3B functions in the biosynthesis of ubiquinone or coenzyme Q gene gene1426 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07155 SH05_RS07160 SH05_07155 SH05_RS07160 1453116 1453190 - tRNA-Tyr tRNA gene1427 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07160 SH05_RS07165 SH05_07160 SH05_RS07165 1453228 1453302 - tRNA-Gln tRNA gene1428 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07165 SH05_RS07170 SH05_07165 SH05_RS07170 1453350 1453426 - tRNA-Met tRNA gene1429 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07170 SH05_RS07175 SH05_07170 SH05_RS07175 1453442 1453516 - tRNA-Gln tRNA gene1430 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07175 SH05_RS07180 SH05_07175 SH05_RS07180 1453551 1453625 - tRNA-Gln tRNA gene1431 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07180 SH05_RS07185 SH05_07180 SH05_RS07185 1453649 1453733 - tRNA-Leu tRNA gene1432 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07185 SH05_RS07190 SH05_07185 SH05_RS07190 1453743 1453819 - tRNA-Met tRNA gene1433 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07190 SH05_RS07195 SH05_07190 asnB asnB 1454199 1455863 - asparagine synthetase B [glutamine-hydrolyzing] functions in asparagine biosynthesis%3B converts glutamine%2C aspartate%2C ATP%2C and water to glutamate%2C asparagine%2C pyrophosphate and AMP gene gene1434 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07195 SH05_RS07200 SH05_07195 SH05_RS07200 1456260 1457012 - ribonucleotide monophosphatase NagD gene gene1435 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07200 SH05_RS07205 SH05_07200 SH05_RS07205 1457060 1458280 - N-acetylglucosamine repressor regulates the synthesis of glucosamine and N-acetylglucosamine by acting as a repressor of the nagEBACD operon and both a repressor and activator of the glmSU operon gene gene1436 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07205 SH05_RS07210 SH05_07205 nagA nagA 1458289 1459437 - N-acetylglucosamine-6-phosphate deacetylase catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate gene gene1437 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07210 SH05_RS07215 SH05_07210 nagB nagB 1459497 1460297 - glucosamine-6-phosphate deaminase catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate gene gene1438 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07215 SH05_RS07220 SH05_07215 SH05_RS07220 1460630 1462576 + PTS N-acetylglucosamine EIICBA component phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel gene gene1439 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07220 SH05_RS07225 SH05_07220 SH05_RS07225 1462779 1464443 + glutamine--tRNA ligase catalyzes a two-step reaction%2C first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA gene gene1440 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07225 SH05_RS07230 SH05_07225 chiP chiP 1465020 1466426 + chitoporin outer membrane porin involved in the transport of chitooligosaccharides gene gene1441 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07230 SH05_RS07235 SH05_07230 SH05_RS07235 1466476 1466802 + chitosugar-induced verified lipoprotein gene gene1442 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07235 SH05_RS07240 SH05_07235 fur fur 1466886 1467332 - ferric uptake regulation protein negatively regulates a number of operons that encode enzymes involved in iron transport%3B activated by manganese%3B forms a homodimer gene gene1443 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07240 SH05_RS07245 SH05_07240 SH05_RS07245 1467325 1467411 - Fur leader peptide gene gene1444 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07245 SH05_RS07250 SH05_07245 SH05_RS07250 1467377 1467631 + hypothetical protein gene gene1445 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07250 SH05_RS07255 SH05_07250 SH05_RS07255 1467621 1468151 - flavodoxin-1 An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group gene gene1446 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07255 SH05_RS07260 SH05_07255 SH05_RS07260 1468291 1468584 - LexA-regulated protein%2C CopB family gene gene1447 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07260 SH05_RS07265 SH05_07260 SH05_RS07265 1468724 1469488 - esterase gene gene1448 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07265 SH05_RS07270 SH05_07265 SH05_RS07270 1469673 1470218 + negative modulator of initiation of replication negative modulator of the initiation of chromosome replication gene gene1449 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07270 SH05_RS07275 SH05_07270 SH05_RS07275 1470244 1471884 + phosphoglucomutase catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate gene gene1450 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07275 SH05_RS07280 SH05_07275 SH05_RS07280 1472098 1472592 + lipoprotein gene gene1451 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07280 SH05_RS07285 SH05_RS07285 SH05_RS07285 1472633 1473283 - hypothetical protein gene gene1452 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07285 SH05_RS07290 SH05_RS07290 SH05_RS07290 1473407 1473604 - hypothetical protein gene gene1453 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07290 SH05_RS07295 SH05_07290 potE potE 1473632 1474951 - putrescine-ornithine antiporter catalyzes the uptake of putrescine via a proton symport mechanism%2C as well as the efflux of putrescine by a putrescine/ornithine antiport system gene gene1454 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07295 SH05_RS07300 SH05_07295 SH05_RS07300 1474948 1477146 - ornithine decarboxylase gene gene1455 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07300 SH05_RS07305 SH05_07300 SH05_RS07305 1477269 1477526 + hypothetical protein gene gene1456 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07305 SH05_RS07310 SH05_07305 SH05_RS07310 1477742 1478419 - two-component system response regulator response regulator in two-component regulatory system with KdpD%3B regulates the kdp operon involved in potassium transport gene gene1457 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07310 SH05_RS07315 SH05_07310 SH05_RS07315 1478416 1481100 - two-component system sensor histidine kinase KdpD sensory histidine kinase in two-component regulatory system with KdpE%3B signal sensing protein gene gene1458 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07315 SH05_RS07320 SH05_07315 SH05_RS07320 1481093 1481665 - potassium-transporting ATPase C chain One of the components of the high-affinity ATP-driven potassium transport (or KDP)system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex gene gene1459 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07320 SH05_RS07325 SH05_07320 SH05_RS07325 1481674 1483722 - potassium-transporting ATPase B chain One of the components of the high-affinity ATP-driven potassium transport (or KDP) system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions gene gene1460 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07325 SH05_RS07330 SH05_07325 SH05_RS07330 1483745 1485418 - potassium-transporting ATPase A chain catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions gene gene1461 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07330 SH05_RS07335 SH05_07330 kdpF kdpF 1485418 1485507 - protein KdpF one of the components of the high-affinity ATP-driven potassium transport (or KDP) system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions gene gene1462 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07335 SH05_RS07340 SH05_07335 SH05_RS07340 1485820 1486026 + DUF2517 domain-containing protein gene gene1463 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07340 SH05_RS07345 SH05_07340 SH05_RS07345 1486269 1490462 + RHS element protein gene gene1464 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07345 SH05_RS07350 SH05_07345 SH05_RS07350 1490462 1490788 + membrane protein gene gene1465 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07350 SH05_RS07355 SH05_07350 SH05_RS07355 1490906 1492339 + hypothetical protein gene gene1466 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07355 SH05_RS07360 SH05_07355 SH05_RS07360 1492336 1492905 + hypothetical protein gene gene1467 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07360 SH05_RS07365 SH05_07360 SH05_RS07365 1493131 1493385 + transposase gene gene1468 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07365 SH05_RS07370 SH05_07365 SH05_RS07370 1493604 1494647 + hypothetical protein gene gene1469 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07370 SH05_RS07375 SH05_07370 SH05_RS07375 1494778 1495539 + hypothetical protein gene gene1470 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07375 SH05_RS07380 SH05_07375 SH05_RS07380 1495687 1496196 + DUF1722 domain-containing protein gene gene1471 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07380 SH05_RS07385 SH05_07380 SH05_RS07385 1496193 1497611 + deoxyribodipyrimidine photolyase UV-induced DNA repair%3B converts cyclobutane-type pyrimidine dimers created during exposure to UV ratiation to monomers%3B light dependent gene gene1472 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07385 SH05_RS07390 SH05_07385 SH05_RS07390 1497761 1499242 - dipeptide permease D gene gene1473 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07390 SH05_RS07395 SH05_07390 SH05_RS07395 1499513 1500256 + Nif3-like dinuclear metal center hexameric protein gene gene1474 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07395 SH05_RS07400 SH05_07395 SH05_RS07400 1500279 1500935 + hypothetical protein gene gene1475 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07400 SH05_RS07405 SH05_07400 SH05_RS07405 1500929 1501861 + allophanate hydrolase gene gene1476 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07405 SH05_RS07410 SH05_07405 SH05_RS07410 1501851 1502585 + hypothetical protein gene gene1477 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07410 SH05_RS07415 SH05_07410 SH05_RS07415 1502621 1503412 + endonuclease VII 5-formyluracil/5-hydroxymethyluracil DNA glycosylase%3B involved in base excision repair of DNA damaged by oxidation or by mutagenic agents%3B acts as DNA glycosylase that recognizes and removes damaged bases with a preference for oxidized pyrimidines%3B has apurinic/apyrimidinic lyase activity gene gene1478 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07415 SH05_RS07420 SH05_07415 SH05_RS07420 1503409 1504455 - protein AbrB gene gene1479 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07420 SH05_RS07425 SH05_07420 SH05_RS07425 1504607 1505668 - fimbrial protein gene gene1480 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07425 SH05_RS07430 SH05_07425 SH05_RS07430 1505665 1506393 - periplasmic pilin chaperone gene gene1481 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07430 SH05_RS07435 SH05_07430 SH05_RS07435 1506408 1508855 - outer membrane protein gene gene1482 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07435 SH05_RS07440 SH05_07435 SH05_RS07440 1508915 1509481 - fimbrial-like adhesin protein gene gene1483 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07440 SH05_RS07445 SH05_07440 gltA gltA 1509871 1511154 - citrate synthase type II enzyme%3B in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate%3B allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation%3B forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A%3B functions in TCA cycle%2C glyoxylate cycle and respiration%3B enzyme from Helicobacter pylori is not inhibited by NADH gene gene1484 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07445 SH05_RS07450 SH05_07445 SH05_RS07450 1511142 1511327 + citrate synthase gene gene1485 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07450 SH05_RS07455 SH05_07450 sdhC sdhC 1511848 1512252 + succinate dehydrogenase cytochrome b556 large membrane subunit gene gene1486 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07455 SH05_RS07460 SH05_07455 sdhD sdhD 1512246 1512593 + succinate dehydrogenase hydrophobic membrane anchor subunit gene gene1487 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07460 SH05_RS07465 SH05_07460 sdhA sdhA 1512593 1514359 + succinate dehydrogenase flavoprotein subunit part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol gene gene1488 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07465 SH05_RS07470 SH05_07465 sdhB sdhB 1514375 1515091 + succinate dehydrogenase iron-sulfur subunit part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol%3B the catalytic subunits are similar to fumarate reductase gene gene1489 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07470 SH05_RS07475 SH05_07470 SH05_RS07475 1515150 1515410 + hypothetical protein gene gene1490 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07475 SH05_RS07480 SH05_07475 SH05_RS07480 1515392 1518193 + 2-oxoglutarate dehydrogenase E1 component gene gene1491 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07480 SH05_RS07485 SH05_07480 SH05_RS07485 1518208 1519425 + dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex component of 2-oxoglutarate dehydrogenase complex%3B catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA gene gene1492 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07485 SH05_RS07490 SH05_07485 sucC sucC 1519700 1520866 + succinyl-CoA ligase subunit beta catalyzes the interconversion of succinyl-CoA and succinate gene gene1493 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07490 SH05_RS07495 SH05_07490 SH05_RS07495 1520866 1521735 + succinyl-CoA ligase subunit alpha Catalyzes the only substrate-level phosphorylation in the TCA cycle gene gene1494 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07495 SH05_RS07500 SH05_07495 SH05_RS07500 1521839 1522561 - mannosyl-D-glycerate transport/metabolism system repressor MngR regulates the succiny-lCoA synthetase operon gene gene1495 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07500 SH05_RS07505 SH05_07500 SH05_RS07505 1522730 1524646 + PTS 2-O-a-mannosyl-D-glycerate transporter subunit IIABC involved in the phosphorylation and transport of sugars across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake gene gene1496 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07505 SH05_RS07510 SH05_07505 SH05_RS07510 1524664 1527297 + mannosylglycerate hydrolase gene gene1497 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07510 SH05_RS07515 SH05_07510 SH05_RS07515 1527322 1527549 + hypothetical protein gene gene1498 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07515 SH05_RS07520 SH05_07515 SH05_RS07520 1528144 1529712 + cytochrome bd-I ubiquinol oxidase subunit 1 part of the aerobic respiratory chain%3B catalyzes the ubiquinol to ubiquinone gene gene1499 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07520 SH05_RS07525 SH05_07520 SH05_RS07525 1529728 1530867 + cytochrome bd-I ubiquinol oxidase subunit 2 gene gene1500 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07525 SH05_RS07530 SH05_07525 SH05_RS07530 1530882 1530995 + cytochrome bd-I ubiquinol oxidase subunit X gene gene1501 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07530 SH05_RS07535 SH05_07530 SH05_RS07535 1530995 1531288 + cyd operon protein YbgE gene gene1502 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07535 SH05_RS07540 SH05_07535 SH05_RS07540 1531438 1531842 + acyl-CoA thioester hydrolase YbgC catalyzes the hydrolysis of short chain aliphatic acyl-CoA thioesters%3B physiological role remains unknown%3B involved in phospholipid metabolism%3B part of the Tol/Pal system of proteins that are critical for maintaining the integrity of the cell envelope components gene gene1503 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07540 SH05_RS07545 SH05_07540 SH05_RS07545 1531848 1532531 + colicin transporter membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins gene gene1504 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07545 SH05_RS07550 SH05_07545 SH05_RS07550 1532535 1532963 + protein TolR membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins gene gene1505 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07550 SH05_RS07555 SH05_07550 tolA tolA 1533028 1534293 + cell envelope integrity/translocation protein TolA inner membrane component of 7 member Tol-Pal envelope-spanning complex%3B involved in maintaining cell envelope integrity%3B utilized by colicins and filamentous phages for import%3B interacts with TolB%2C Pal%2C and through TolB to various outer membrane porins gene gene1506 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07555 SH05_RS07560 SH05_07555 tolB tolB 1534426 1535718 + protein TolB forms dimers%3B may be involved in cell envelope integrity%3B interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA gene gene1507 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07560 SH05_RS07565 SH05_07560 SH05_RS07565 1535753 1536274 + peptidoglycan-associated lipoprotein gene gene1508 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07565 SH05_RS07570 SH05_07565 SH05_RS07570 1536284 1537075 + periplasmic TolA-binding protein periplasmic protein that interacts with TolA%3B the tol-pal system is probably involved in maintaining cell envelope integrity gene gene1509 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07570 SH05_RS07575 SH05_07570 SH05_RS07575 1537240 1537315 + tRNA-Lys tRNA gene1510 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07575 SH05_RS07580 SH05_07575 SH05_RS07580 1537451 1537526 + tRNA-Val tRNA gene1511 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07580 SH05_RS07585 SH05_07580 SH05_RS07585 1537529 1537604 + tRNA-Lys tRNA gene1512 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07585 SH05_RS07590 SH05_07585 SH05_RS07590 1537754 1537829 + tRNA-Val tRNA gene1513 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07590 SH05_RS07595 SH05_07590 SH05_RS07595 1537833 1537908 + tRNA-Lys tRNA gene1514 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07595 SH05_RS07600 SH05_07595 SH05_RS07600 1538055 1538130 + tRNA-Lys tRNA gene1515 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07600 SH05_RS07605 SH05_07600 SH05_RS07605 1538263 1538338 + tRNA-Lys tRNA gene1516 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07605 SH05_RS07610 SH05_07605 SH05_RS07610 1538771 1539814 + quinolinate synthase A 3 different subfamilies%3B catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate gene gene1517 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07610 SH05_RS07615 SH05_07610 SH05_RS07615 1539852 1540571 + nicotinamide riboside transporter PnuC involved in nicotinamide riboside transport gene gene1518 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07615 SH05_RS07620 SH05_07615 SH05_RS07620 1540568 1541509 - zinc transporter ZitB involved in zinc efflux across the cytoplasmic membrane gene gene1519 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07620 SH05_RS07625 SH05_07620 SH05_RS07625 1541623 1542003 - periplasmic protein gene gene1520 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07625 SH05_RS07630 SH05_RS07630 SH05_RS07630 1542098 1542211 - glutamate decarboxylase gene gene1521 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07630 SH05_RS07635 SH05_07630 SH05_RS07635 1542319 1543371 + phospho-2-dehydro-3-deoxyheptonate aldolase Phe-sensitive catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C phenylalanine sensitive gene gene1522 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07635 SH05_RS07640 SH05_07635 gpmA gpmA 1543529 1544281 - 2%2C3-bisphosphoglycerate-dependent phosphoglycerate mutase 2%2C3-bisphosphoglycerate-dependent%3B catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate gene gene1523 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07640 SH05_RS07645 SH05_07640 galM galM 1544483 1545523 - aldose 1-epimerase mutarotase%3B catalyzes the conversion of beta-galactose to the alpha-anomer%3B links the metabolism of lactose and galactose gene gene1524 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07645 SH05_RS07650 SH05_07645 SH05_RS07650 1545517 1546665 - galactokinase catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism gene gene1525 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07650 SH05_RS07655 SH05_07650 SH05_RS07655 1546669 1547715 - galactose-1-phosphate uridylyltransferase catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P gene gene1526 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07655 SH05_RS07660 SH05_07655 SH05_RS07660 1547725 1548741 - UDP-glucose 4-epimerase gene gene1527 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07660 SH05_RS07665 SH05_07660 SH05_RS07665 1549002 1550474 - molybdate ABC transporter ATPase contains 2 ATP-binding cassettes%3B involved in the transport of molybdenum gene gene1528 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07665 SH05_RS07670 SH05_07670 SH05_RS07670 1550542 1551330 - transcriptional regulator ModE represses the modABCD operon and activates the moaABCD and napFDAGHBC operons gene gene1529 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07670 SH05_RS07675 SH05_07675 SH05_RS07675 1551459 1551608 + multidrug efflux pump accessory protein AcrZ gene gene1530 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07675 SH05_RS07680 SH05_07680 modA modA 1551775 1552548 + molybdate-binding periplasmic protein with ModCB is involved in the high-affinity transport of molybdate gene gene1531 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07680 SH05_RS07685 SH05_07685 modB modB 1552548 1553237 + molybdenum ABC transporter permease part of ModCBA molybdate transporter%3B member of ABC superfamily%3B inner membrane component%3B regulated by repressor protein ModE gene gene1532 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07685 SH05_RS07690 SH05_07690 modC modC 1553240 1554298 + molybdenum import ATP-binding protein ModC Part of the ABC transporter complex modABC involved in molybdenum import gene gene1533 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07690 SH05_RS07695 SH05_07695 SH05_RS07695 1554299 1555117 - pyridoxal phosphate phosphatase YbhA gene gene1534 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07695 SH05_RS07700 SH05_07700 SH05_RS07700 1555272 1556267 + 6-phosphogluconolactonase catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate gene gene1535 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07700 SH05_RS07705 SH05_07705 SH05_RS07705 1556308 1557261 - transcriptional regulator gene gene1536 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07705 SH05_RS07710 SH05_07710 SH05_RS07710 1557445 1558497 + PrpF family isomerase gene gene1537 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07710 SH05_RS07715 SH05_07715 SH05_RS07715 1558573 1560006 + hypothetical protein gene gene1538 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07715 SH05_RS07720 SH05_07720 SH05_RS07720 1560189 1562450 + aconitase gene gene1539 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07720 SH05_RS07725 SH05_07725 SH05_RS07725 1562684 1563967 - acyl-CoA thioesterase gene gene1540 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07725 SH05_RS07730 SH05_07730 SH05_RS07730 1564119 1564595 - kinase inhibitor homolog%2C UPF0098 family YbhB%3B similar to rat and human kinase inhibitory proteins gene gene1541 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07730 SH05_RS07735 SH05_07735 SH05_RS07735 1564654 1565886 - adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7%2C8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate gene gene1542 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07735 SH05_RS07740 SH05_07740 SH05_RS07740 1566030 1567070 + biotin synthase catalyzes the formation of biotin from dethiobiotin gene gene1543 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07740 SH05_RS07745 SH05_07745 SH05_RS07745 1567067 1568221 + 8-amino-7-oxononanoate synthase catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine gene gene1544 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07745 SH05_RS07750 SH05_07750 SH05_RS07750 1568208 1568963 + malonyl-[acyl-carrier protein] O-methyltransferase BioC methyltransferase%3B acyl carrier protein involved in an unidentified step in the synthesis of pimeloyl-CoA%2C a biotin precursor%3B member of the bio operon (bioABFCD)%3B in Escherichia coli%2C bioC-null mutants require biotin for growth gene gene1545 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07750 SH05_RS07755 SH05_07755 bioD bioD 1568956 1569633 + ATP-dependent dethiobiotin synthetase BioD 1 DTB synthetase%3B dethiobiotin synthase%3B involved in production of dethiobiotin from ATP and 7%2C8-diaminononanoate and carbon dioxide%3B contains magnesium gene gene1546 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07755 SH05_RS07760 SH05_07760 SH05_RS07760 1570212 1572233 + UvrABC system protein B The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands%2C where it probes for the presence of a lesion gene gene1547 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07760 SH05_RS07765 SH05_07765 SH05_RS07765 1572425 1573333 - hypothetical protein gene gene1548 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07765 SH05_RS07770 SH05_07770 SH05_RS07770 1573576 1573731 - hypothetical protein gene gene1549 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07770 SH05_RS07775 SH05_07775 moaA moaA 1573730 1574719 + cyclic pyranopterin monophosphate synthase together with moaC%2C is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z gene gene1550 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07775 SH05_RS07780 SH05_07780 SH05_RS07780 1574741 1575253 + molybdenum cofactor biosynthesis protein B gene gene1551 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07780 SH05_RS07785 SH05_07785 moaC moaC 1575256 1575741 + cyclic pyranopterin monophosphate synthase accessory protein MoaC%3B along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z%3B involved in molybdenum cofactor biosynthesis gene gene1552 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07785 SH05_RS07790 SH05_07790 moaD moaD 1575734 1575979 + molybdopterin synthase sulfur carrier subunit catalyzes the conversion of molybdopterin precursor Z into molybdopterin gene gene1553 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07790 SH05_RS07795 SH05_07795 moaE moaE 1575981 1576433 + molybdopterin synthase catalytic subunit catalyzes the conversion of molybdopterin precursor Z into molybdopterin gene gene1554 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07795 SH05_RS07800 SH05_07800 SH05_RS07800 1576570 1577274 + hypothetical protein gene gene1555 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07800 SH05_RS07805 SH05_07805 SH05_RS07805 1577479 1578192 + Bax protein gene gene1556 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07805 SH05_RS07810 SH05_07810 SH05_RS07810 1578228 1579184 - hypothetical protein gene gene1557 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07810 SH05_RS07815 SH05_07815 SH05_RS07815 1579184 1580425 - cardiolipin synthase B gene gene1558 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07815 SH05_RS07820 SH05_07820 SH05_RS07820 1580422 1581183 - hypothetical protein gene gene1559 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07820 SH05_RS07825 SH05_07825 SH05_RS07825 1581316 1581726 + hypothetical protein gene gene1560 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07825 SH05_RS07830 SH05_07830 SH05_RS07830 1581688 1582794 - inner membrane transport permease YbhR gene gene1561 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07830 SH05_RS07835 SH05_07835 SH05_RS07835 1582805 1583938 - inner membrane transport permease YbhS gene gene1562 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07835 SH05_RS07840 SH05_07840 SH05_RS07840 1583931 1585667 - ABC transporter ATPase gene gene1563 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07840 SH05_RS07845 SH05_07845 SH05_RS07845 1585660 1586655 - transporter gene gene1564 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07845 SH05_RS07850 SH05_07850 SH05_RS07850 1586658 1587329 - DUF1956 domain-containing tetR family transcriptional regulator gene gene1565 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07850 SH05_RS07855 SH05_07855 SH05_RS07855 1587558 1588922 + ATP-dependent RNA helicase RhlE this helicase is not essential cell growth gene gene1566 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07855 SH05_RS07860 SH05_07860 SH05_RS07860 1589154 1589603 - swarming motility protein gene gene1567 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07860 SH05_RS07865 SH05_07865 dinG dinG 1589756 1591906 + ATP-dependent helicase DinG helicase involved in DNA repair and perhaps also replication gene gene1568 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07865 SH05_RS07870 SH05_07870 SH05_RS07870 1591934 1592896 + family 3 glycosyltransferase gene gene1569 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07870 SH05_RS07875 SH05_07875 SH05_RS07875 1593037 1594122 + dehydrogenase gene gene1570 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07875 SH05_RS07880 SH05_07880 SH05_RS07880 1594351 1594611 - hypothetical protein gene gene1571 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07880 SH05_RS07885 SH05_07885 SH05_RS07885 1594876 1595142 - RNA polymerase-binding protein DksA gene gene1572 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07885 SH05_RS07890 SH05_07890 SH05_RS07890 1595216 1595893 - PKHD-type hydroxylase gene gene1573 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07890 SH05_RS07895 SH05_07895 SH05_RS07895 1595935 1598217 - catecholate siderophore receptor Fiu Fiu%3B YbiL%3B porin involved in the uptake of iron complexed with catecholate siderophores (e.g. dihydroxybenzoylserine%2C dihydroxybenzoate) and beta lactam agents%3B Fiu interacts with TonB which provides the energy required for transport across the outer membrane%3B acts as a receptor for iron-siderophores and microcins E492%2C M%2C and H47%3B outer membrane protein gene gene1574 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07895 SH05_RS07900 SH05_07900 SH05_RS07900 1598482 1598742 - colanic acid mucoidy stimulation protein gene gene1575 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07900 SH05_RS07905 SH05_07905 SH05_RS07905 1599018 1599944 + ribosomal RNA large subunit methyltransferase F gene gene1576 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07905 SH05_RS07910 SH05_07910 SH05_RS07910 1599941 1602166 - moderate conductance mechanosensitive channel YbiO gene gene1577 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07910 SH05_RS07915 SH05_07915 glnQ glnQ 1602427 1603149 - glutamine transport ATP-binding protein GlnQ similar to ATP-binding component of ABC transporters gene gene1578 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07915 SH05_RS07920 SH05_07920 glnP glnP 1603146 1603805 - glutamine ABC transporter permease similar to permease component of ABC transporters%3B mutations impair ability of Escherichia coli to transport and utilize glutamine gene gene1579 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07920 SH05_RS07925 SH05_07925 glnH glnH 1603944 1604690 - glutamine-binding periplasmic protein similar to periplasmic-binding component of ABC transporters gene gene1580 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07925 SH05_RS07930 SH05_RS07930 SH05_RS07930 1604736 1605029 - hypothetical protein gene gene1581 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07930 SH05_RS07935 SH05_07935 SH05_RS07935 1605094 1605597 - DNA protection during starvation protein binds DNA in a non-sequence-specific manner and is abundant during stationary phase%3B forms a DNA-protein crystal that protects DNA from damage%3B required for normal starvation response and long-term stationary viability%3B forms a homododecameric complex and sequesters iron which provides protection against oxidative damage gene gene1582 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07935 SH05_RS07940 SH05_07940 SH05_RS07940 1605896 1606783 - threonine/homoserine exporter RhtA gene gene1583 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07940 SH05_RS07945 SH05_07945 ompX ompX 1607136 1607651 + outer membrane protein X OmpX%3B involved in cell adhesion%3B forms an eight-stranded antiparallel beta-barrel that protrudes from the cell surface%3B mutations in the gene increase cell-surface contact in fimbriated strains but decrease contact in nonfimbriated strains gene gene1584 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07945 SH05_RS07950 SH05_07950 SH05_RS07950 1607700 1609283 - phosphoethanolamine transferase OpgE gene gene1585 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07950 SH05_RS07955 SH05_07955 SH05_RS07955 1609555 1609683 - small protein MntS gene gene1586 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07955 SH05_RS07960 SH05_07960 SH05_RS07960 1609869 1610336 + transcriptional regulator MntR Transcriptional regulator that represses the manganese transporter MntH when manganese is present gene gene1587 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07960 SH05_RS07965 SH05_07965 SH05_RS07965 1610333 1611451 + hypothetical protein gene gene1588 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07965 SH05_RS07970 SH05_07970 SH05_RS07970 1611510 1612430 - transpeptidase gene gene1589 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07970 SH05_RS07975 SH05_07975 SH05_RS07975 1612649 1614241 + ABC transporter ATP-binding protein gene gene1590 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07975 SH05_RS07980 SH05_07980 SH05_RS07980 1614482 1615747 - DUF1479 domain-containing protein gene gene1591 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07980 SH05_RS07985 SH05_07985 SH05_RS07985 1615899 1616714 - sugar phosphatase YbiV gene gene1592 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07985 SH05_RS07990 SH05_07990 SH05_RS07990 1616860 1619292 - pyruvate formate lyase gene gene1593 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07990 SH05_RS07995 SH05_07995 SH05_RS07995 1619298 1620197 - pyruvate formate lyase activating enzyme gene gene1594 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS07995 SH05_RS08000 SH05_08000 SH05_RS08000 1620328 1620990 + fructose-6-phosphate aldolase 1 similar to transaldolase from Escherichia coli%3B many organisms have multiple copies gene gene1595 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08000 SH05_RS08005 SH05_08005 SH05_RS08005 1621066 1621815 - molybdopterin-synthase adenylyltransferase gene gene1596 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08005 SH05_RS08010 SH05_08010 SH05_RS08010 1621815 1623050 - molybdopterin molybdenumtransferase is involved in the formation of active molybdenum cofactor and the chelation of molybdenum gene gene1597 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08010 SH05_RS08015 SH05_08015 SH05_RS08015 1623254 1624219 + isoaspartyl peptidase gene gene1598 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08015 SH05_RS08020 SH05_08020 SH05_RS08020 1624206 1626077 + glutathione import ATP-binding protein GsiA with GsiBCD is involved in glutathione import%3B GsiA contains 2 ATP-binding domains gene gene1599 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08020 SH05_RS08025 SH05_08025 SH05_RS08025 1626097 1627635 + glutathione-binding protein GsiB with GsiACD is involved in the transport of glutathione into the cell gene gene1600 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08025 SH05_RS08030 SH05_08030 SH05_RS08030 1627653 1628573 + glutathione ABC transporter permease with GsiABD is involved in the transport of glutathione into the cell gene gene1601 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08030 SH05_RS08035 SH05_08035 SH05_RS08035 1628576 1629487 + glutathione ABC transporter permease with GsiABD is involved in the transport of glutathione into the cell gene gene1602 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08035 SH05_RS08040 SH05_RS08040 SH05_RS08040 1629665 1632012 + c-di-GMP phosphodiesterase gene gene1603 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08040 SH05_RS08045 SH05_08045 SH05_RS08045 1632020 1633348 + diguanylate cyclase gene gene1604 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08045 SH05_RS08050 SH05_08050 rimO rimO 1633395 1634720 - ribosomal protein S12 methylthiotransferase RimO catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit gene gene1605 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08050 SH05_RS08055 SH05_08055 bssR bssR 1634933 1635316 + biofilm regulator BssR BssS%3B regulator of biofilm through signal secretion%3B disruption of this gene in Escherichia coli led to effects on biofilm formation%2C alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing gene gene1606 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08055 SH05_RS08060 SH05_08060 SH05_RS08060 1635427 1636542 + soluble aldose sugar dehydrogenase YliI gene gene1607 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08060 SH05_RS08065 SH05_08065 SH05_RS08065 1636539 1637165 - glutathione S-transferase gene gene1608 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08065 SH05_RS08070 SH05_08070 SH05_RS08070 1637412 1638614 + D-alanyl-D-alanine carboxypeptidase gene gene1609 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08070 SH05_RS08075 SH05_08075 SH05_RS08075 1638661 1639419 - DeoR family transcriptional regulator gene gene1610 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08075 SH05_RS08080 SH05_08080 SH05_RS08080 1639477 1640073 - undecaprenyl pyrophosphate phosphatase gene gene1611 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08080 SH05_RS08085 SH05_08085 SH05_RS08085 1640358 1641590 + multidrug transporter MdfA gene gene1612 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08085 SH05_RS08090 SH05_08090 SH05_RS08090 1641631 1641909 - hypothetical protein gene gene1613 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08090 SH05_RS08095 SH05_08095 SH05_RS08095 1642001 1642816 - flavin mononucleotide phosphatase YbjI gene gene1614 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08095 SH05_RS08100 SH05_08100 SH05_RS08100 1642816 1644024 - hypothetical protein gene gene1615 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08100 SH05_RS08105 SH05_08105 SH05_RS08105 1644108 1644644 + DNA-binding transcriptional regulator gene gene1616 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08105 SH05_RS08110 SH05_08110 SH05_RS08110 1644819 1646504 - transporter gene gene1617 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08110 SH05_RS08115 SH05_08115 SH05_RS08115 1646774 1647151 + hypothetical protein gene gene1618 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08115 SH05_RS08120 SH05_08120 SH05_RS08120 1647181 1647438 - glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase%3B also involved in reducing some disulfides in a coupled system with glutathione reductase gene gene1619 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08120 SH05_RS08125 SH05_08125 SH05_RS08125 1647598 1647885 + DUF1418 domain-containing protein YbjC%3B located in the same operon as the nfsA gene%3B member of the soxRS regulon which mediates in part the increased levels of superoxide in response to oxidative stress%3B induced by paraquat%3B regulated by SoxS%3B unknown function gene gene1620 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08125 SH05_RS08130 SH05_08130 SH05_RS08130 1647869 1648591 + oxygen-insensitive NADPH nitroreductase NADPH-dependent%3B oxygen-insensitive%3B catalyzes the reduction of nitroaromatic compounds gene gene1621 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08130 SH05_RS08135 SH05_08135 SH05_RS08135 1648652 1649554 + ribosomal protein S6 modification protein responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6 gene gene1622 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08135 SH05_RS08140 SH05_08140 SH05_RS08140 1649642 1650118 + negative regulator of motility%3B multicopy suppressor of coaA(Ts) gene gene1623 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08140 SH05_RS08145 SH05_08145 SH05_RS08145 1650324 1650485 + putrescine/spermidine ABC transporter substrate-binding protein gene gene1624 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08145 SH05_RS08150 SH05_08150 SH05_RS08150 1650469 1651581 + putrescine-binding periplasmic protein gene gene1625 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08150 SH05_RS08155 SH05_08155 potG potG 1651676 1652809 + putrescine transport ATP-binding protein PotG part of the PotFGHI ATP-dependent putrescine transporter gene gene1626 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08155 SH05_RS08160 SH05_08160 SH05_RS08160 1652819 1653772 + spermidine/putrescine ABC transporter permease gene gene1627 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08160 SH05_RS08165 SH05_08165 SH05_RS08165 1653769 1654614 + spermidine/putrescine ABC transporter permease gene gene1628 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08165 SH05_RS08170 SH05_08170 SH05_RS08170 1654674 1655162 + hypothetical protein gene gene1629 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08170 SH05_RS08175 SH05_08175 rumB rumB 1655203 1656330 + 23S rRNA methyltransferase RNA uridine methyltransferase B%3B catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA gene gene1630 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08175 SH05_RS08180 SH05_08180 SH05_RS08180 1656529 1657260 - ABC transporter arginine-binding protein 1 with ArtPMQI is involved in arginine transport gene gene1631 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08180 SH05_RS08185 SH05_08185 artM artM 1657551 1658219 - arginine ABC transporter permease ArtM with ArtPQJI acts to transport arginine across the inner membrane gene gene1632 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08185 SH05_RS08190 SH05_08190 SH05_RS08190 1658219 1658935 - arginine ABC transporter permease ArtQ with ArtPMJI transports arginine across the inner membrane gene gene1633 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08190 SH05_RS08195 SH05_08195 SH05_RS08195 1658942 1659673 - arginine ABC transporter substrate-binding protein with ArtPMQI is involved in arginine transport gene gene1634 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08195 SH05_RS08200 SH05_08200 SH05_RS08200 1659691 1660419 - arginine transport ATP-binding protein ArtP gene gene1635 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08200 SH05_RS08205 SH05_08205 SH05_RS08205 1660637 1661152 - lipoprotein induced during stationary phase and by acivicin (a glutamine analog)%3B regulated by Lrp and RpoS gene gene1636 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08205 SH05_RS08210 SH05_08210 SH05_RS08210 1661278 1661601 + hypothetical protein gene gene1637 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08210 SH05_RS08215 SH05_08215 SH05_RS08215 1661598 1662428 + N-acetylmuramoyl-L-alanine amidase catalyzes the cleavage of the bond between muamic acid and l-alanine gene gene1638 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08215 SH05_RS08220 SH05_08220 SH05_RS08220 1662425 1663438 - NAD(P)H-dependent oxidoreductase gene gene1639 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08220 SH05_RS08225 SH05_08225 SH05_RS08225 1663537 1664967 - NAD-dependent oxidoreductase gene gene1640 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08225 SH05_RS08230 SH05_08230 SH05_RS08230 1664978 1665979 - low specificity L-threonine aldolase low- specificity%3B catalyzes the formation of acetaldehyde and glycine from L-threonine%3B acts on L-threonine%2C L-allo-threonine%2C L-threo-phenylserine%2C and L-erythro-phenylserine gene gene1641 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08230 SH05_RS08235 SH05_08235 SH05_RS08235 1666016 1667734 - pyruvate dehydrogenase [ubiquinone] catalyzes the formation of acetate from pyruvate gene gene1642 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08235 SH05_RS08240 SH05_08240 SH05_RS08240 1667867 1668835 - NADH oxidoreductase HCR gene gene1643 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08240 SH05_RS08245 SH05_08245 SH05_RS08245 1668847 1670499 - hydroxylamine reductase gene gene1644 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08245 SH05_RS08250 SH05_08250 SH05_RS08250 1670643 1671542 - transporter gene gene1645 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08250 SH05_RS08255 SH05_08255 SH05_RS08255 1672037 1672732 - aquaporin Z porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure gene gene1646 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08255 SH05_RS08260 SH05_08260 SH05_RS08260 1672945 1673100 - hypothetical protein gene gene1647 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08260 SH05_RS08265 SH05_08265 SH05_RS08265 1673158 1674816 + OLD family ATP-dependent endonuclease%3B DUF2813 family protein gene gene1648 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08265 SH05_RS08270 SH05_08270 SH05_RS08270 1674813 1675805 - DUF535 domain-containing protein gene gene1649 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08270 SH05_RS08275 SH05_08275 SH05_RS08275 1675920 1677035 + MacA family efflux pump subunit confers macrolide resistance via active drug efflux gene gene1650 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08275 SH05_RS08280 SH05_08280 SH05_RS08280 1677032 1678978 + macrolide export ATP-binding/permease MacB with MacA is involved in the export of macrolide gene gene1651 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08280 SH05_RS08285 SH05_08285 SH05_RS08285 1679051 1679275 - cold-shock protein CspD inhibits DNA replication at both initiation and elongation steps%3B stationary phase and starvation inducible gene gene1652 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08285 SH05_RS08290 SH05_08290 clpS clpS 1679598 1679918 + ATP-dependent Clp protease adapter protein ClpS involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation%3B binds to the N-terminal domain of the chaperone ClpA gene gene1653 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08290 SH05_RS08295 SH05_08295 clpA clpA 1679949 1682225 + ATP-dependent Clp protease ATP-binding subunit ClpA ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease%3B directs protease to specific substrates gene gene1654 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08295 SH05_RS08300 SH05_08300 SH05_RS08300 1682569 1682656 - tRNA-Ser tRNA gene1655 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08300 SH05_RS08305 SH05_08305 SH05_RS08305 1682910 1683128 - translation initiation factor IF-1 gene gene1656 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08305 SH05_RS08310 SH05_08310 aat aat 1683413 1684117 - leucyl/phenylalanyl-tRNA--protein transferase leucyltransferase%3B phenylalanyltransferse%3B functions in the N-end rule pathway%3B transfers Leu%2C Phe%2C Met%2C from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys gene gene1657 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08310 SH05_RS08315 SH05_08315 SH05_RS08315 1684159 1685880 - ATP-binding/permease CydC in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c gene gene1658 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08315 SH05_RS08320 SH05_08320 SH05_RS08320 1685881 1687647 - ATP-binding/permease CydD in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c gene gene1659 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08320 SH05_RS08325 SH05_08325 SH05_RS08325 1687770 1688735 - thioredoxin reductase catalyzes the transfer of electrons from NADPH to thioredoxin%3B FAD/NAD(P) binding gene gene1660 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08325 SH05_RS08330 SH05_08330 SH05_RS08330 1689280 1689774 + leucine-responsive regulatory protein mediates a global response to leucine%3B acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system gene gene1661 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08330 SH05_RS08335 SH05_08335 SH05_RS08335 1689909 1693898 + cell division protein FtsK DNA-binding membrane protein required for chromosome resolution and partitioning gene gene1662 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08335 SH05_RS08340 SH05_08340 lolA lolA 1694057 1694668 + outer membrane lipoprotein carrier protein LolA participates with LolB in the incorporation of lipoprotein into the outer membrane gene gene1663 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08340 SH05_RS08345 SH05_08345 SH05_RS08345 1694679 1696022 + replication-associated recombination protein A gene gene1664 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08345 SH05_RS08350 SH05_08350 SH05_RS08350 1696113 1697405 + serine--tRNA ligase gene gene1665 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08350 SH05_RS08355 SH05_08355 SH05_RS08355 1697644 1700088 + dimethyl sulfoxide reductase DmsA gene gene1666 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08355 SH05_RS08360 SH05_08360 SH05_RS08360 1700099 1700716 + dimethyl sulfoxide reductase subunit B oxidoreductase%2C Fe-S subunit%3B terminal electron transfer protein for the reduction of DMSO gene gene1667 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08360 SH05_RS08365 SH05_08365 SH05_RS08365 1700718 1701581 + dimethyl sulfoxide reductase subunit C gene gene1668 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08365 SH05_RS08370 SH05_08370 SH05_RS08370 1701616 1702242 - isochorismatase gene gene1669 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08370 SH05_RS08375 SH05_08375 SH05_RS08375 1702556 1703704 + MFS transporter inner membrane protein gene gene1670 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08375 SH05_RS08380 SH05_08380 SH05_RS08380 1703914 1705344 + inner membrane transporter YcaM gene gene1671 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08380 SH05_RS08385 SH05_08385 SH05_RS08385 1705345 1706253 - LysR family transcriptional regulator gene gene1672 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08385 SH05_RS08390 SH05_08390 SH05_RS08390 1706353 1706943 + NAD(P)H-dependent oxidoreductase gene gene1673 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08390 SH05_RS08395 SH05_08395 pflA pflA 1707025 1707765 - pyruvate formate-lyase 1-activating enzyme activates pyruvate formate-lyase 1 under anaerobic conditions gene gene1674 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08395 SH05_RS08400 SH05_08400 SH05_RS08400 1707957 1710239 - formate acetyltransferase 1 formate acetyltransferase%3B catalyzes the formation of formate and acetyl-CoA from pyruvate gene gene1675 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08400 SH05_RS08405 SH05_08405 SH05_RS08405 1710294 1711151 - formate transporter FocA gene gene1676 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08405 SH05_RS08410 SH05_08410 SH05_RS08410 1711557 1713317 - ribosomal protein S12 methylthiotransferase accessory factor YcaO gene gene1677 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08410 SH05_RS08415 SH05_08415 SH05_RS08415 1713447 1714139 + UPF0702 family inner membrane protein gene gene1678 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08415 SH05_RS08420 SH05_08420 SH05_RS08420 1714338 1715426 + phosphoserine aminotransferase catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate%3B catalyzes 4 phosphohydroxy L-threonine from 2-oxo 3 hydroxy 4- phosphobutanoate%3B required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine gene gene1679 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08420 SH05_RS08425 SH05_08425 SH05_RS08425 1715497 1716780 + 3-phosphoshikimate 1-carboxyvinyltransferase gene gene1680 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08425 SH05_RS08430 SH05_08430 SH05_RS08430 1716949 1717713 + molecular chaperone gene gene1681 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08430 SH05_RS08435 SH05_08435 cmk cmk 1717886 1718569 + cytidylate kinase Catalyzes the formation of (d)CDP from ATP and (d)CMP gene gene1682 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08435 SH05_RS08440 SH05_08440 rpsA rpsA 1718680 1720353 + 30S ribosomal protein S1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit%3B autoregulates expression via a C-terminal domain%3B in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats%3B the S1 nucleic acid-binding domain is found associated with other proteins gene gene1683 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08440 SH05_RS08445 SH05_08445 ihfB ihfB 1720513 1720797 + integration host factor subunit beta This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control gene gene1684 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08445 SH05_RS08450 SH05_08450 SH05_RS08450 1721005 1723269 + hypothetical protein gene gene1685 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08450 SH05_RS08455 SH05_08455 SH05_RS08455 1723306 1725054 + lipid A export ATP-binding/permease MsbA involved in the transport of lipid A across the inner membrane gene gene1686 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08455 SH05_RS08460 SH05_08460 lpxK lpxK 1725051 1726037 + tetraacyldisaccharide 4'-kinase transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1%2C4'-bis-phosphate gene gene1687 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08460 SH05_RS08465 SH05_08465 SH05_RS08465 1726074 1727306 + hypothetical protein gene gene1688 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08465 SH05_RS08470 SH05_08470 SH05_RS08470 1727358 1727540 + hypothetical protein gene gene1689 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08470 SH05_RS08475 SH05_08475 SH05_RS08475 1727537 1728283 + 3-deoxy-manno-octulosonate cytidylyltransferase CMP-2-keto-3-deoxyoctulosonic acid synthetase%3B catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS gene gene1690 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08475 SH05_RS08480 SH05_08480 SH05_RS08480 1728437 1729330 + protein kinase-like domain protein gene gene1691 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08480 SH05_RS08485 SH05_08485 SH05_RS08485 1729307 1730086 - envelope biogenesis factor ElyC gene gene1692 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08485 SH05_RS08490 SH05_08490 SH05_RS08490 1730222 1731007 + SAM-dependent methyltransferase gene gene1693 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08490 SH05_RS08495 SH05_08495 SH05_RS08495 1731004 1732326 + chromosome partition protein MukF acts with MukB and MukE to condense the chromosome and allow for segregation during cell division gene gene1694 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08495 SH05_RS08500 SH05_08500 SH05_RS08500 1732307 1733011 + chromosome partition protein MukE acts with MukB and MukF to condense the chromosome and allow for segregation during cell division gene gene1695 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08500 SH05_RS08505 SH05_08505 mukB mukB 1733011 1737471 + chromosome partition protein MukB SMC (structural maintenance of chromosomes) family of proteins%3B involved in chromosome condensatin and partitioning%3B forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ%3B mutations result in cell division defects gene gene1696 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08505 SH05_RS08510 SH05_08510 SH05_RS08510 1737732 1739579 + transpeptidase catalyzes the formation of a meso-diaminopimelyl- meso-diaminopimelyl crosslink gene gene1697 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08510 SH05_RS08515 SH05_08515 SH05_RS08515 1739760 1740308 + M15A protease-related family periplasmic protein gene gene1698 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08515 SH05_RS08520 SH05_08520 SH05_RS08520 1740335 1740982 + metal-binding enzyme gene gene1699 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08520 SH05_RS08525 SH05_08525 SH05_RS08525 1741204 1742394 - aspartate aminotransferase gene gene1700 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08525 SH05_RS08530 SH05_08530 SH05_RS08530 1742393 1742563 + hypothetical protein gene gene1701 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08530 SH05_RS08535 SH05_08535 SH05_RS08535 1742579 1743667 - outer membrane protein F gene gene1702 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08535 SH05_RS08540 SH05_08540 SH05_RS08540 1744270 1745670 - asparagine--tRNA ligase gene gene1703 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08540 SH05_RS08545 SH05_08545 SH05_RS08545 1745839 1747041 - nicotinate phosphoribosyltransferase catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate gene gene1704 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08545 SH05_RS08550 SH05_08550 pepN pepN 1747307 1749919 + aminopeptidase N gene gene1705 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08550 SH05_RS08555 SH05_08555 ssuB ssuB 1749962 1750729 - aliphatic sulfonate ABC transporter ATP-binding protein part of the ABC type transport system SsuABC for aliphatic sulfonates%3B with SsuA being the periplasmic substrate-binding subunit%2C SsuB the ATP-binding subunit and SsuC the permease gene gene1706 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08555 SH05_RS08560 SH05_08560 ssuC ssuC 1750726 1751517 - aliphatic sulfonate ABC transporter permease part of the ABC type transport system for alkanesulfonate SsuABC%3B SsuB the ATP-binding subunit and SsuC the permease gene gene1707 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08560 SH05_RS08565 SH05_08565 SH05_RS08565 1751528 1752673 - alkanesulfonate monooxygenase catalyzes the release of sulfite from alkanesulfonates gene gene1708 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08565 SH05_RS08570 SH05_08570 SH05_RS08570 1752670 1753629 - aliphatic sulfonate ABC transporter substrate-binding protein part of the ABC type transport system SsuABC for aliphatic sulfonates%3B with SsuA being the periplasmic subunit SsuB the ATP-binding subunit and SsuC the permease gene gene1709 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08570 SH05_RS08575 SH05_08575 SH05_RS08575 1753622 1754197 - FMN reductase gene gene1710 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08575 SH05_RS08580 SH05_08580 SH05_RS08580 1754553 1755092 + fimbrial subunit ElfA gene gene1711 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08580 SH05_RS08585 SH05_08585 SH05_RS08585 1755202 1755876 + fimbrial protein gene gene1712 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08585 SH05_RS08590 SH05_08590 SH05_RS08590 1755901 1758501 + usher protein ElfC involved in fimbria production gene gene1713 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08590 SH05_RS08595 SH05_08595 SH05_RS08595 1758492 1759562 + fimbrial-like adhesin protein gene gene1714 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08595 SH05_RS08600 SH05_08600 SH05_RS08600 1759664 1760116 + fimbrial protein gene gene1715 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08600 SH05_RS08605 SH05_08605 SH05_RS08605 1760124 1760639 + fimbrial-like adhesin protein gene gene1716 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08605 SH05_RS08610 SH05_08610 SH05_RS08610 1760632 1761342 + periplasmic pilin chaperone gene gene1717 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08610 SH05_RS08615 SH05_08615 SH05_RS08615 1761453 1762463 + dihydroorotate dehydrogenase catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway%3B uses a flavin nucleotide as an essential cofactor%3B class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus%2C which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors gene gene1718 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08615 SH05_RS08620 SH05_08620 SH05_RS08620 1762637 1763179 + cell division protein ZapC gene gene1719 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08620 SH05_RS08625 SH05_08625 SH05_RS08625 1763176 1764285 - 6-N-hydroxylaminopurine detoxification oxidoreductase gene gene1720 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08625 SH05_RS08630 SH05_08630 rlmL rlmL 1764529 1766637 + ribosomal RNA large subunit methyltransferase K/L catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA gene gene1721 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08630 SH05_RS08635 SH05_08635 SH05_RS08635 1766649 1768556 + ABC transporter ATPase Uup%3B in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity%3B mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth gene gene1722 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08635 SH05_RS08640 SH05_08640 SH05_RS08640 1768686 1769939 + paraquat-inducible protein A gene gene1723 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08640 SH05_RS08645 SH05_08645 SH05_RS08645 1769944 1771584 + paraquat-inducible protein B gene gene1724 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08645 SH05_RS08650 SH05_08650 SH05_RS08650 1771581 1772144 + DUF330 domain-containing protein gene gene1725 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08650 SH05_RS08655 SH05_08655 SH05_RS08655 1772400 1772567 + ribosome modulation factor gene gene1726 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08655 SH05_RS08660 SH05_08660 SH05_RS08660 1772637 1773155 - 3-hydroxydecanoyl-ACP dehydratase catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2%2C3-decenoyl-ACP or 3%2C4-decenoyl-ACP gene gene1727 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08660 SH05_RS08665 SH05_08665 SH05_RS08665 1773224 1774984 - peptidase gene gene1728 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08665 SH05_RS08670 SH05_08670 SH05_RS08670 1775170 1775622 + macrodomain Ter protein gene gene1729 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08670 SH05_RS08675 SH05_08675 SH05_RS08675 1775698 1776738 - outer membrane protein A OmpA is believed to be a porin%2C involved in diffusion of nonspecific small solutes across the outer membrane. It is the most abundant integral protein of the outer membrane of E. coli%2C and it is known to play a role as a phage receptor%2C a mediator of F-factor dependent conjugation%2C and in maintaining the structural shape of the outer membrane%3B 3a%3B II*%3B G%3B d gene gene1730 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08675 SH05_RS08680 SH05_08680 SH05_RS08680 1776941 1777111 + hypothetical protein gene gene1731 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08680 SH05_RS08685 SH05_08685 SH05_RS08685 1777095 1777604 - cell division inhibitor SulA gene gene1732 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08685 SH05_RS08690 SH05_08690 SH05_RS08690 1777823 1778452 + protein Sxy gene gene1733 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08690 SH05_RS08695 SH05_08695 SH05_RS08695 1778415 1780568 - hypothetical protein gene gene1734 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08695 SH05_RS08700 SH05_08700 SH05_RS08700 1780587 1781033 - hypothetical protein gene gene1735 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08700 SH05_RS08705 SH05_08705 helD helD 1781156 1783210 + helicase IV catalyzes the ATP-dependent unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand gene gene1736 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08705 SH05_RS08710 SH05_08710 mgsA mgsA 1783242 1783700 - methylglyoxal synthase catalyzes the formation of methylglyoxal from glycerone phosphate gene gene1737 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08710 SH05_RS08715 SH05_08715 SH05_RS08715 1783796 1784458 - hypothetical protein gene gene1738 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08715 SH05_RS08720 SH05_08720 SH05_RS08720 1784498 1784668 - hypothetical protein gene gene1739 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08720 SH05_RS08725 SH05_08725 SH05_RS08725 1784631 1785044 + CoA-binding protein gene gene1740 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08725 SH05_RS08730 SH05_08730 SH05_RS08730 1785089 1785406 - heat-shock protein HspQ gene gene1741 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08730 SH05_RS08735 SH05_08735 SH05_RS08735 1785464 1786654 - ribosomal RNA large subunit methyltransferase I SAM-dependent%3Bcatalyzes the methylation of cytosine at position 1962 of the 23S rRNA gene gene1742 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08735 SH05_RS08740 SH05_08740 SH05_RS08740 1786749 1787027 + acylphosphatase catalyzes the hydrolysis of acylphosphate gene gene1743 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08740 SH05_RS08745 SH05_08745 SH05_RS08745 1787024 1787353 - sulfurtransferase TusE transfers sulfur from TusBCD complex to MnmA%3B involved in thiouridation of U34 position of some tRNAs gene gene1744 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08745 SH05_RS08750 SH05_08750 SH05_RS08750 1787444 1788103 - Modulator of FtsH protease inner membrane protein binds to the HflBKC complex which modulates FtsH activity gene gene1745 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08750 SH05_RS08755 SH05_08755 SH05_RS08755 1788310 1788397 - tRNA-Ser tRNA gene1746 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08755 SH05_RS08760 SH05_08760 SH05_RS08760 1788824 1789942 + hydrogenase-1 small chain gene gene1747 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08760 SH05_RS08765 SH05_08765 SH05_RS08765 1789939 1791732 + hydrogenase-1 large chain gene gene1748 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08765 SH05_RS08770 SH05_08770 SH05_RS08770 1791751 1792458 + Ni/Fe-hydrogenase B-type cytochrome subunit gene gene1749 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08770 SH05_RS08775 SH05_08775 SH05_RS08775 1792455 1793042 + hydrogenase 1 maturation protease HyaD%3B endopeptidase involved in the cleavage of the C-terminus end of HyaB (the large subunit of hydrogenase 1) gene gene1750 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08775 SH05_RS08780 SH05_08780 SH05_RS08780 1793039 1793437 + hydrogenase-1 operon protein HyaE involved in processing hydrogenase proteins HyaA and HyaB gene gene1751 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08780 SH05_RS08785 SH05_08785 SH05_RS08785 1793434 1794291 + hydrogenase-1 operon protein HyaF gene gene1752 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08785 SH05_RS08790 SH05_08790 SH05_RS08790 1794425 1795969 + cytochrome bd-II ubiquinol oxidase subunit 1 part of the aerobic respiratory chain%3B catalyzes the ubiquinol to ubiquinone gene gene1753 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08790 SH05_RS08795 SH05_08795 SH05_RS08795 1795981 1797117 + cytochrome bd-II ubiquinol oxidase subunit 2 gene gene1754 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08795 SH05_RS08800 SH05_08800 SH05_RS08800 1797130 1797222 + cytochrome bd-II oxidase subunit gene gene1755 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08800 SH05_RS08805 SH05_08805 SH05_RS08805 1797302 1798600 + periplasmic AppA protein gene gene1756 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08805 SH05_RS08810 SH05_08810 SH05_RS08810 1798715 1800895 - tyrosine-protein kinase etk gene gene1757 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08810 SH05_RS08815 SH05_08815 SH05_RS08815 1800915 1801361 - protein-tyrosine phosphatase Wzb shows phosphatase activity towards the autophosphorylated Wzc protein%2C which induces colanic acid biosynthesis%3B catalyzes the phosphorylation of UDP-glucose dehydrogenase%2C an enzyme involved in colanic acid biosynthesis gene gene1758 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08815 SH05_RS08820 SH05_08820 SH05_RS08820 1801349 1802488 - O-antigen capsule outer membrane auxillary protein export channel required for the translocation of capsular polysaccharide through the outer membrane gene gene1759 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08820 SH05_RS08825 SH05_08825 SH05_RS08825 1802534 1804630 - O-antigen capsule production periplasmic protein gene gene1760 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08825 SH05_RS08830 SH05_08830 SH05_RS08830 1804630 1805376 - O-antigen capsule production periplasmic protein gene gene1761 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08830 SH05_RS08835 SH05_08835 SH05_RS08835 1805373 1806017 - hypothetical protein gene gene1762 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08835 SH05_RS08840 SH05_08840 SH05_RS08840 1806124 1806429 - threonine-rich inner membrane protein GfcA gene gene1763 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08840 SH05_RS08845 SH05_08845 SH05_RS08845 1806551 1806766 - transposase gene gene1764 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08845 SH05_RS08850 SH05_08850 SH05_RS08850 1806712 1807215 + Insertion element IS1 4 protein InsB gene gene1765 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08850 SH05_RS08855 SH05_08855 SH05_RS08855 1807648 1807860 - cold-shock protein CspH gene gene1766 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08855 SH05_RS08860 SH05_08860 SH05_RS08860 1808146 1808358 + cold-shock protein CspG gene gene1767 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08860 SH05_RS08865 SH05_08865 SH05_RS08865 1808532 1808762 + cold-shock protein gene gene1768 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08865 SH05_RS08870 SH05_08870 SH05_RS08870 1808752 1808925 + protein GnsA gene gene1769 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08870 SH05_RS08875 SH05_08875 SH05_RS08875 1808974 1810047 - 4Fe-4S membrane protein gene gene1770 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08875 SH05_RS08880 SH05_08880 SH05_RS08880 1810119 1812833 - sensor histidine kinase Member of the two-component regulatory system torS/torR involved in the anaerobic utilization of trimethylamine-N-oxide gene gene1771 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08880 SH05_RS08885 SH05_08885 SH05_RS08885 1812946 1813974 + periplasmic protein TorT periplasmic sensory protein associated with the TorRS two-component regulatory system gene gene1772 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08885 SH05_RS08890 SH05_08890 SH05_RS08890 1813947 1814639 - two-component system response regulator gene gene1773 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08890 SH05_RS08895 SH05_08895 SH05_RS08895 1814769 1815941 + cytochrome c-type protein TorC with TorA forms the inducible trimethylamine N-oxide reductase which transfers electrons from menaquinones first to TorC then to TorA gene gene1774 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08895 SH05_RS08900 SH05_08900 SH05_RS08900 1815941 1818487 + trimethylamine-N-oxide reductase 1 catalyzes the reduction of trimethylamine-N-oxide to form trimethylamine gene gene1775 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08900 SH05_RS08905 SH05_08905 torD torD 1818484 1819083 + chaperone protein TorD TorD%3B involved in the biogenesis of torA%3B acts on torA before the insertion of the molybdenum cofactor and%2C as a result%2C probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor gene gene1776 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08905 SH05_RS08910 SH05_08910 SH05_RS08910 1819235 1819540 - chaperone modulatory protein CbpM with CpbA modulates the activity of the dnaK chaperone system%3B interacts with CbpA and inhibits both the DnaJ-like co-chaperone activity and the DNA binding activity of CbpA gene gene1777 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08910 SH05_RS08915 SH05_08915 SH05_RS08915 1819540 1820460 - curved DNA-binding protein functional analog of DnaJ%3B co-chaperone with DnaK%2C molecular chaperone in an adaptive response to environmental stresses other than heat shock gene gene1778 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08915 SH05_RS08920 SH05_08920 SH05_RS08920 1820721 1821977 + hypothetical protein gene gene1779 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08920 SH05_RS08925 SH05_08925 SH05_RS08925 1822270 1823511 + glucose-1-phosphatase gene gene1780 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08925 SH05_RS08930 SH05_08930 SH05_RS08930 1823549 1823776 - hypothetical protein gene gene1781 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08930 SH05_RS08935 SH05_08935 SH05_RS08935 1823797 1824393 - NAD(P)H dehydrogenase (quinone) catalyzes the transfer of electrons from NADH to ubiquinone gene gene1782 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08935 SH05_RS08940 SH05_08940 SH05_RS08940 1824597 1824833 + hypothetical protein gene gene1783 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08940 SH05_RS08945 SH05_08945 SH05_RS08945 1824766 1824939 + KGG family protein gene gene1784 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08945 SH05_RS08950 SH05_08950 SH05_RS08950 1825196 1826524 - transporter gene gene1785 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08950 SH05_RS08955 SH05_08955 SH05_RS08955 1826545 1827039 - FMN reductase gene gene1786 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08955 SH05_RS08960 SH05_08960 SH05_RS08960 1827050 1827640 - malonic semialdehyde reductase RutE gene gene1787 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08960 SH05_RS08965 SH05_08965 SH05_RS08965 1827650 1828450 - reactive intermediate detoxifying aminoacrylate hydrolase gene gene1788 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08965 SH05_RS08970 SH05_08970 SH05_RS08970 1828458 1828844 - aminoacrylate deaminase reactive intermediate detoxification%3B weak enamine/imine deaminase activity gene gene1789 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08970 SH05_RS08975 SH05_08975 SH05_RS08975 1828856 1829548 - peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB gene gene1790 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08975 SH05_RS08980 SH05_08980 SH05_RS08980 1829548 1830639 - pyrimidine monooxygenase RutA gene gene1791 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08980 SH05_RS08985 SH05_08985 SH05_RS08985 1830927 1831565 + transcriptional regulator gene gene1792 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08985 SH05_RS08990 SH05_08990 putA putA 1831605 1835567 - bifunctional protein PutA proline utilization protein A%3B multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate%3B in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus%3B forms dimers and is a peripherally membrane-associated protein gene gene1793 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08990 SH05_RS08995 SH05_08995 SH05_RS08995 1835622 1835831 + hypothetical protein gene gene1794 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS08995 SH05_RS09000 SH05_09000 SH05_RS09000 1835990 1837498 + sodium/proline symporter involved in the sodium dependent uptake of proline gene gene1795 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09000 SH05_RS09005 SH05_09005 SH05_RS09005 1837684 1838005 - hypothetical protein gene gene1796 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09005 SH05_RS09010 SH05_RS09010 SH05_RS09010 1838041 1838870 + iron permease gene gene1797 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09010 SH05_RS09015 SH05_09015 SH05_RS09015 1838928 1840055 + iron uptake system component EfeO with EfeUB forms an iron transport system which is silent in E. coli K-12 due to a mutation in EfeU gene gene1798 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09015 SH05_RS09020 SH05_09020 SH05_RS09020 1840061 1841332 + deferrochelatase/peroxidase EfeB gene gene1799 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09020 SH05_RS09025 SH05_09025 SH05_RS09025 1841250 1841597 - hypothetical protein gene gene1800 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09025 SH05_RS09030 SH05_09030 SH05_RS09030 1841953 1842741 + hypothetical protein gene gene1801 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09030 SH05_RS09035 SH05_09035 pgaD pgaD 1842791 1843204 - poly-beta-1%2C6-N-acetyl-D-glucosamine biosynthesis protein PgaD in Yersinia this gene is involved in biofilm formation and hemin adsorption%3B in Escherichia coli it is involved in PGA biosynthesis and export gene gene1802 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09035 SH05_RS09040 SH05_09040 SH05_RS09040 1843206 1844444 - N-glycosyltransferase predicted polysaccharide polymerase involved in biofilm formation%3B required for the synthesis of the beta-1%2C6-N-acetylglucosamine polysaccharide%3B PgaC%3B in Yersinia the HmsR protein is an inner membrane protein gene gene1803 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09040 SH05_RS09045 SH05_09045 pgaB pgaB 1844524 1846542 - poly-beta-1%2C6-N-acetyl-D-glucosamine N-deacetylase in Yersinia this protein is involved in biofilm formation and hemin adsorption%3B related protein PgaB in Escherichia coli is an outer membrane N-deacetylase involved in poly-beta-1%2C6-N-acetyl-D-glucosamine (PGA) export gene gene1804 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09045 SH05_RS09050 SH05_09050 pgaA pgaA 1846551 1848974 - poly-beta-1%2C6-N-acetyl-D-glucosamine export protein outer membrane protein essential for the synthesis of poly-beta-1%2C6-N-acetyl-D-glucosamine (PGA)%3B adhesin required for biofilm formation%3B PgaA (HmsH) seems to translocate and/or dock PGA to the cell surface%3B member of the hmsHFRS (ycdSRQP or pgaABCD in Escherichia coli) operon in Yersinia gene gene1805 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09050 SH05_RS09055 SH05_09055 SH05_RS09055 1849561 1850919 + diguanylate cyclase gene gene1806 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09055 SH05_RS09060 SH05_09060 SH05_RS09060 1850960 1851826 - transposase gene gene1807 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09060 SH05_RS09065 SH05_09065 SH05_RS09065 1851823 1852122 - transposase gene gene1808 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09065 SH05_RS09070 SH05_09070 SH05_RS09070 1852208 1852531 + hypothetical protein gene gene1809 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09070 SH05_RS09075 SH05_09075 SH05_RS09075 1852528 1853514 + hypothetical protein gene gene1810 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09075 SH05_RS09080 SH05_09080 SH05_RS09080 1853786 1853884 + hypothetical protein gene gene1811 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09080 SH05_RS09085 SH05_09085 SH05_RS09085 1854431 1854518 - tRNA-Ser tRNA gene1812 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09085 SH05_RS09090 SH05_09090 ghrA ghrA 1854752 1855690 + glyoxylate/hydroxypyruvate reductase A catalyzes the formation of glycolate and glycerate from glyoxylate and hydroxypyruvate%2C respectively gene gene1813 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09090 SH05_RS09095 SH05_09095 SH05_RS09095 1855745 1856482 + phosphatase gene gene1814 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09095 SH05_RS09100 SH05_09100 SH05_RS09100 1856506 1857060 + chaperone protein YcdY gene gene1815 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09100 SH05_RS09105 SH05_09105 SH05_RS09105 1857162 1857653 + hypothetical protein gene gene1816 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09105 SH05_RS09110 SH05_09110 SH05_RS09110 1857717 1858550 - curli production assembly/transport component CsgG involved in the stability of the curlin proteins during assembly%3B involved in the secretion of the major curlin subunit CsgA across the outer membrane gene gene1817 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09110 SH05_RS09115 SH05_09115 SH05_RS09115 1858577 1858993 - curli production assembly/transport component CsgF nucleator protein that participates in the polymerization of curlin (CsgA) subunits into curli (extracellular fibers from Escherichia and Salmonella spp. that are involved in the colonization of inert surfaces and biofilm formation)%3B part of the curli secretion and assembly protein complex gene gene1818 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09115 SH05_RS09120 SH05_09120 SH05_RS09120 1859018 1859407 - curli production assembly/transport component CsgE chaperone-like protein that participates in the polymerization of curlin (CsgA) subunits into curli (extracellular fibers from Escherichia and Salmonella spp. that are involved in the colonization of inert surfaces and biofilm formation)%3B part of the curli secretion and assembly protein complex gene gene1819 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09120 SH05_RS09125 SH05_09125 SH05_RS09125 1859412 1860062 - CsgBAC operon transcriptional regulatory protein activates the csgBA and csgDEFG operons involved in biofilm formation gene gene1820 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09125 SH05_RS09130 SH05_09130 SH05_RS09130 1860529 1860714 - hypothetical protein gene gene1821 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09130 SH05_RS09135 SH05_09135 csgB csgB 1860817 1861272 + minor curlin subunit CsgB%3B functions as a nucleator in the assembly of curli (coiled surface structures) on the cell surface gene gene1822 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09135 SH05_RS09140 SH05_09140 csgA csgA 1861313 1861768 + major curlin subunit the major structural subunit of curlin which assemble to form curli which can bind to fibronectin gene gene1823 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09140 SH05_RS09145 SH05_09145 csgC csgC 1861827 1862159 + curli assembly protein CsgC involved in autoagglutination of curliated cells%3B not involved in production of curli fibers gene gene1824 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09145 SH05_RS09150 SH05_09150 SH05_RS09150 1862280 1862591 + hypothetical protein gene gene1825 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09150 SH05_RS09155 SH05_09155 SH05_RS09155 1862686 1863219 + O-acetyl-ADP-ribose deacetylase interacts and inactivates RNase III during cold shock gene gene1826 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09155 SH05_RS09160 SH05_09160 SH05_RS09160 1863221 1864642 + cardiolipin synthase C gene gene1827 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09160 SH05_RS09165 SH05_09165 opgC opgC 1864650 1865807 - glucan biosynthesis protein C required for the transfer of succinyl residues to osmoregulated periplasmic glucans gene gene1828 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09165 SH05_RS09170 SH05_09170 SH05_RS09170 1865852 1865995 - hypothetical protein gene gene1829 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09170 SH05_RS09175 SH05_09175 SH05_RS09175 1865999 1866130 - hypothetical protein gene gene1830 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09175 SH05_RS09180 SH05_09180 mdoG mdoG 1866183 1867736 + glucan biosynthesis protein G involved in the biosynthesis of osmoregulated periplasmic glucans%3B required for the assembly of the polyglucose structure of glucan gene gene1831 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09180 SH05_RS09185 SH05_09185 SH05_RS09185 1867759 1870272 + glucosyltransferase necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space gene gene1832 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09185 SH05_RS09190 SH05_09190 SH05_RS09190 1870445 1870672 + outer membrane integrity lipoprotein gene gene1833 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09190 SH05_RS09195 SH05_09195 SH05_RS09195 1870673 1871047 - acidic protein MsyB gene gene1834 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09195 SH05_RS09200 SH05_09200 SH05_RS09200 1871077 1871175 - hypothetical protein gene gene1835 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09200 SH05_RS09205 SH05_09205 SH05_RS09205 1871130 1872356 - multidrug resistance protein MdtG Confers resistance to fosfomycin and deoxycholate gene gene1836 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09205 SH05_RS09210 SH05_09210 SH05_RS09210 1872528 1873448 - lipid A biosynthesis lauroyltransferase Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA gene gene1837 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09210 SH05_RS09215 SH05_09215 SH05_RS09215 1873673 1874725 + rhodanese-related sulfurtransferase gene gene1838 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09215 SH05_RS09220 SH05_09220 SH05_RS09220 1874767 1875342 - hypothetical protein gene gene1839 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09220 SH05_RS09225 SH05_09225 SH05_RS09225 1875346 1875912 - cytochrome b561 homolog 2 gene gene1840 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09225 SH05_RS09230 SH05_09230 SH05_RS09230 1876173 1876286 - hypothetical protein gene gene1841 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09230 SH05_RS09235 SH05_09235 solA solA 1876334 1877452 - N-methyl-L-tryptophan oxidase catalyzes the demethylation of N-methyl-L-tryptophan forming L-tryptophan and formaldehyde%3B FAD-binding%3B can also catalyze the demethylation of other N-methyl amino acids gene gene1842 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09235 SH05_RS09240 SH05_09240 bssS bssS 1877567 1877821 - biofilm regulator BssS BssS%3B regulator of biofilm through signal secretion%3B disruption of this gene in Escherichia coli led to effects on biofilm formation%2C alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing gene gene1843 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09240 SH05_RS09245 SH05_09245 SH05_RS09245 1878108 1878353 - DNA-damage-inducible protein I gene gene1844 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09245 SH05_RS09250 SH05_09250 SH05_RS09250 1878427 1879473 - dihydroorotase gene gene1845 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09250 SH05_RS09255 SH05_09255 SH05_RS09255 1879579 1880139 - lipoprotein gene gene1846 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09255 SH05_RS09260 SH05_09260 SH05_RS09260 1880273 1880920 - glutaredoxin cofactor involved in the reduction of disulfides gene gene1847 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09260 SH05_RS09265 SH05_09265 SH05_RS09265 1880984 1882192 - multidrug resistance protein MdtH Confers resistance to norfloxacin and enoxacin gene gene1848 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09265 SH05_RS09270 SH05_09270 SH05_RS09270 1882428 1883012 + ribosomal-protein-alanine acetyltransferase gene gene1849 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09270 SH05_RS09275 SH05_09275 SH05_RS09275 1883023 1883670 + hypothetical protein gene gene1850 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09275 SH05_RS09280 SH05_09280 SH05_RS09280 1883672 1884595 + oxidoreductase gene gene1851 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09280 SH05_RS09285 SH05_09285 SH05_RS09285 1884705 1886240 + lipid II flippase MurJ gene gene1852 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09285 SH05_RS09290 SH05_09290 SH05_RS09290 1886280 1886696 - flagella synthesis protein FlgN export chaperone for FlgK and FlgL gene gene1853 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09290 SH05_RS09295 SH05_09295 SH05_RS09295 1886701 1886994 - negative regulator of flagellin synthesis regulates the flagellar specific sigma28 transcription factor gene gene1854 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09295 SH05_RS09300 SH05_09300 flgA flgA 1887070 1887729 - flagella basal body P-ring formation protein FlgA required for the assembly of the flagellar basal body P-ring gene gene1855 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09300 SH05_RS09305 SH05_09305 flgB flgB 1887884 1888300 + flagellar biosynthesis protein FlgB with FlgF and C makes up the proximal portion of the flagellar basal body rod%3B Vibrio parahaemolyticus protein is associated with the polar flagella gene gene1856 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09305 SH05_RS09310 SH05_09310 flgC flgC 1888304 1888708 + flagellar basal-body rod protein FlgC with FlgF and B makes up the proximal portion of the flagellar basal body rod gene gene1857 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09310 SH05_RS09315 SH05_09315 flgD flgD 1888720 1889415 + flagellar basal body rod modification protein FlgD acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of some flagellar genes%3B in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production gene gene1858 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09315 SH05_RS09320 SH05_09320 flgE flgE 1889440 1890648 + flagellar hook protein FlgE the hook connects flagellar basal body to the flagellar filament gene gene1859 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09320 SH05_RS09325 SH05_09325 flgF flgF 1890668 1891423 + flagellar basal-body rod protein FlgF FlgF%2C with FlgB and C%2C makes up the proximal portion of the flagellar basal body rod gene gene1860 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09325 SH05_RS09330 SH05_09330 flgG flgG 1891595 1892377 + flagellar basal body rod protein FlgG makes up the distal portion of the flagellar basal body rod gene gene1861 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09330 SH05_RS09335 SH05_09335 flgH flgH 1892430 1893128 + flagellar L-ring protein part of the flagellar basal body which consists of four rings L%2CP%2C S and M mounted on a central rod gene gene1862 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09335 SH05_RS09340 SH05_09340 flgI flgI 1893140 1894237 + flagellar P-ring protein part of the basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B Vibrio parahaemolyticus%2C Yersinia%2C Bradyrhizobium and other bacteria have two copies of this and other flagellar genes%3B the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum gene gene1863 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09340 SH05_RS09345 SH05_09345 flgJ flgJ 1894237 1895178 + peptidoglycan hydrolase FlgJ Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space gene gene1864 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09345 SH05_RS09350 SH05_09350 flgK flgK 1895244 1896887 + flagellar hook-associated protein 1 with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook gene gene1865 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09350 SH05_RS09355 SH05_09355 flgL flgL 1896899 1897852 + flagellar hook-associated protein with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes gene gene1866 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09355 SH05_RS09360 SH05_09360 rne rne 1898048 1901233 - ribonuclease E bifunctional ribonuclease E/endoribonuclease/RNA-binding protein/RNA degradosome binding protein%3B forms part of the membrane-associated degradosome complex along with PNPase%2C RhlB%2C and enolase gene gene1867 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09360 SH05_RS09365 SH05_09365 SH05_RS09365 1901368 1901688 + hypothetical protein gene gene1868 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09365 SH05_RS09370 SH05_09370 SH05_RS09370 1901806 1902765 + ribosomal large subunit pseudouridine synthase C catalyzes the transformation of uracil to pseudouracil at nucleotides U955%2C U2504%2C and U2580 in 23S rRNA gene gene1869 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09370 SH05_RS09375 SH05_09375 SH05_RS09375 1902877 1903461 - septum formation inhibitor Maf Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell gene gene1870 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09375 SH05_RS09380 SH05_09380 SH05_RS09380 1903660 1904181 + DUF177 domain-containing protein gene gene1871 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09380 SH05_RS09385 SH05_09385 rpmF rpmF 1904233 1904406 + 50S ribosomal protein L32 some L32 proteins have zinc finger motifs consisting of CXXC while others do not gene gene1872 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09385 SH05_RS09390 SH05_09390 SH05_RS09390 1904517 1905557 + phosphate acyltransferase gene gene1873 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09390 SH05_RS09395 SH05_09395 SH05_RS09395 1905625 1906578 + 3-oxoacyl-ACP synthase III FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs gene gene1874 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09395 SH05_RS09400 SH05_09400 SH05_RS09400 1906594 1907523 + malonyl CoA-ACP transacylase gene gene1875 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09400 SH05_RS09405 SH05_09405 fabG fabG 1907536 1908270 + 3-oxoacyl-ACP reductase catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis gene gene1876 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09405 SH05_RS09410 SH05_09410 SH05_RS09410 1908481 1908717 + acyl carrier protein carries the fatty acid chain in fatty acid biosynthesis gene gene1877 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09410 SH05_RS09415 SH05_09415 SH05_RS09415 1908805 1910046 + 3-oxoacyl-ACP synthase II FabF%3B beta-ketoacyl-ACP synthase II%2C KASII%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP gene gene1878 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09415 SH05_RS09420 SH05_09420 SH05_RS09420 1910166 1910975 + aminodeoxychorismate lyase catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate gene gene1879 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09420 SH05_RS09425 SH05_09425 SH05_RS09425 1910978 1912000 + septation protein%2C ampicillin sensitivity gene gene1880 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09425 SH05_RS09430 SH05_09430 SH05_RS09430 1911990 1912631 + thymidylate kinase gene gene1881 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09430 SH05_RS09435 SH05_09435 SH05_RS09435 1912628 1913632 + DNA polymerase III subunit delta' catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA gene gene1882 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09435 SH05_RS09440 SH05_09440 SH05_RS09440 1913643 1914440 + DNAse gene gene1883 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09440 SH05_RS09445 SH05_09445 SH05_RS09445 1914735 1916168 + PTS glucose subunit IIBC phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel gene gene1884 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09445 SH05_RS09450 SH05_09450 SH05_RS09450 1916228 1918417 - fhuE receptor gene gene1885 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09450 SH05_RS09455 SH05_09455 SH05_RS09455 1918751 1919110 + HIT-like protein HinT gene gene1886 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09455 SH05_RS09460 SH05_09460 SH05_RS09460 1919113 1919490 + hypothetical protein gene gene1887 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09460 SH05_RS09465 SH05_09465 SH05_RS09465 1919504 1920145 + penicillin-binding protein activator LpoB gene gene1888 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09465 SH05_RS09470 SH05_09470 thiK thiK 1920126 1920950 + thiamine kinase catalyzes the phosphorylation of thiamine to thiamine phosphate gene gene1889 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09470 SH05_RS09475 SH05_09475 SH05_RS09475 1920961 1921986 + beta-hexosaminidase hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides gene gene1890 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09475 SH05_RS09480 SH05_09480 SH05_RS09480 1922009 1922551 + hypothetical protein gene gene1891 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09480 SH05_RS09485 SH05_09485 SH05_RS09485 1922951 1924255 + NADH dehydrogenase gene gene1892 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09485 SH05_RS09490 SH05_09490 SH05_RS09490 1924465 1925004 + hypothetical protein gene gene1893 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09490 SH05_RS09495 SH05_09495 SH05_RS09495 1925066 1925698 - transcriptional regulator gene gene1894 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09495 SH05_RS09500 SH05_09500 SH05_RS09500 1925939 1926196 + multiple stress resistance protein BhsA gene gene1895 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09500 SH05_RS09505 SH05_09505 SH05_RS09505 1926278 1927237 - peptidoglycan-binding protein LysM gene gene1896 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09505 SH05_RS09510 SH05_09510 SH05_RS09510 1927384 1930830 - transcription-repair-coupling factor gene gene1897 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09510 SH05_RS09515 SH05_09515 SH05_RS09515 1930958 1932031 - hypothetical protein gene gene1898 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09515 SH05_RS09520 SH05_09520 SH05_RS09520 1932293 1933492 + lipoprotein-releasing system protein LolC part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane gene gene1899 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09520 SH05_RS09525 SH05_09525 lolD lolD 1933485 1934186 + lipoprotein-releasing system ATP-binding protein LolD outer membrane specific%3B part of transporter complex lolCDE involved in the translocation of mature outer membrane-directed lipoproteins%2C from the inner membrane to the periplasmic chaperone gene gene1900 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09525 SH05_RS09530 SH05_09530 SH05_RS09530 1934186 1935430 + lipoprotein-releasing system protein LolE part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane gene gene1901 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09530 SH05_RS09535 SH05_09535 SH05_RS09535 1935459 1936370 + N-acetyl-D-glucosamine kinase catalyzes the formation of N-acetyl-D-glucosamine-6-phosphate from N-acetyl-D-glucosamine gene gene1902 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09535 SH05_RS09540 SH05_09540 SH05_RS09540 1936386 1937225 + NAD-dependent deacetylase Modulates the activities of several enzymes which are inactive in their acetylated form gene gene1903 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09540 SH05_RS09545 SH05_09545 SH05_RS09545 1937345 1938133 - hypothetical protein gene gene1904 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09545 SH05_RS09550 SH05_09550 SH05_RS09550 1938130 1938591 - hypothetical protein gene gene1905 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09550 SH05_RS09555 SH05_09555 potD potD 1938649 1939695 - spermidine/putrescine-binding periplasmic protein can transport spermidine and putrescine but affinity is higher for spermidine%3B forms a complex of PotA2BCD%3B PotD is a periplasmic component that binds the substrate gene gene1906 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09555 SH05_RS09560 SH05_09560 potC potC 1939692 1940486 - spermidine/putrescine ABC transporter permease can transport spermidine and putrescine but affinity is higher for spermidine%3B forms a complex of PotA2BCD%3B PotC is a membrane component gene gene1907 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09560 SH05_RS09565 SH05_09565 potB potB 1940483 1941340 - spermidine/putrescine ABC transporter permease can transport spermidine and putrescine but affinity is higher for spermidine%3B forms a complex of PotA2BCD%3B PotB is a membrane component gene gene1908 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09565 SH05_RS09570 SH05_09570 potA potA 1941324 1942460 - Fe3+/spermidine/putrescine ABC transporter ATP-binding protein functions together with PotBCD (A2BCD) in ATP-dependent polyamine transport%3B PotA is the membrane-associated ATPase gene gene1909 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09570 SH05_RS09575 SH05_09575 SH05_RS09575 1942439 1942654 - hypothetical protein gene gene1910 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09575 SH05_RS09580 SH05_09580 SH05_RS09580 1942710 1943936 + peptidase T gene gene1911 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09580 SH05_RS09585 SH05_09585 SH05_RS09585 1943985 1945106 - 50S ribosomal protein L16 arginine hydroxylase gene gene1912 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09585 SH05_RS09590 SH05_09590 SH05_RS09590 1945182 1946642 - sensor protein PhoQ gene gene1913 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09590 SH05_RS09595 SH05_09595 SH05_RS09595 1946642 1947313 - two-component system response regulator response regulator in two-component regulatory system with PhoQ%3B involved in magnesium starvation and stress gene gene1914 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09595 SH05_RS09600 SH05_09600 SH05_RS09600 1947482 1948852 - adenylosuccinate lyase Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide gene gene1915 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09600 SH05_RS09605 SH05_09605 SH05_RS09605 1948856 1949497 - lysogenization regulator HflD%3B UPF0274%3B in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein%3B in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis gene gene1916 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09605 SH05_RS09610 SH05_09610 mnmA mnmA 1949533 1950639 - tRNA-specific 2-thiouridylase MnmA catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs gene gene1917 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09610 SH05_RS09615 SH05_09615 SH05_RS09615 1950693 1951154 - phosphatase gene gene1918 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09615 SH05_RS09620 SH05_09620 SH05_RS09620 1951164 1951817 - ribosomal large subunit pseudouridine synthase E catalyzes the formation of pseudouridine from uracil-2457 in 23S ribosomal RNA gene gene1919 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09620 SH05_RS09625 SH05_09625 SH05_RS09625 1951989 1953239 + isocitrate dehydrogenase Converts isocitrate to alpha ketoglutarate gene gene1920 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09625 SH05_RS09630 SH05_09630 SH05_RS09630 1953733 1954398 - e14 prophage%3B SAM-dependent methyltransferase gene gene1921 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09630 SH05_RS09635 SH05_09635 SH05_RS09635 1954399 1955094 - membrane protein gene gene1922 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09635 SH05_RS09640 SH05_09640 SH05_RS09640 1955561 1956454 + bacteriophage T4 late gene expression-blocking protein gene gene1923 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09640 SH05_RS09645 SH05_09645 SH05_RS09645 1956545 1957672 - integrase gene gene1924 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09645 SH05_RS09650 SH05_09650 SH05_RS09650 1957653 1957898 - excisionase-like protein from lambdoid prophage 14 gene gene1925 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09650 SH05_RS09655 SH05_09655 SH05_RS09655 1958642 1958950 - e14 prophage%3B uncharacterized protein gene gene1926 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09655 SH05_RS09660 SH05_09660 SH05_RS09660 1959125 1959799 - e14 prophage%3B repressor protein phage e14 gene gene1927 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09660 SH05_RS09665 SH05_09665 SH05_RS09665 1959890 1960090 + transcriptional regulator gene gene1928 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09665 SH05_RS09670 SH05_09670 SH05_RS09670 1960134 1960691 + transcriptional regulator gene gene1929 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09670 SH05_RS09675 SH05_09675 SH05_RS09675 1960688 1961026 + e14 prophage%3B uncharacterized protein gene gene1930 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09675 SH05_RS09680 SH05_09680 SH05_RS09680 1961036 1962403 + hypothetical protein gene gene1931 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09680 SH05_RS09685 SH05_09685 SH05_RS09685 1962415 1962597 + e14 prophage%3B uncharacterized protein gene gene1932 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09685 SH05_RS09690 SH05_09690 SH05_RS09690 1962597 1963070 + hypothetical protein gene gene1933 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09690 SH05_RS09695 SH05_09695 SH05_RS09695 1962997 1963788 + hypothetical protein gene gene1934 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09695 SH05_RS09700 SH05_09700 SH05_RS09700 1963779 1964363 + phage tail protein gene gene1935 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09700 SH05_RS09705 SH05_09705 SH05_RS09705 1964367 1965155 + integrase gene gene1936 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09705 SH05_RS09710 SH05_09710 SH05_RS09710 1965155 1965757 + Tail fiber assembly protein homolog from lambdoid prophage e14 gene gene1937 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09710 SH05_RS09715 SH05_09715 SH05_RS09715 1965729 1966142 - e14 prophage%3B uncharacterized protein gene gene1938 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09715 SH05_RS09720 SH05_RS09720 SH05_RS09720 1966144 1966488 - hypothetical protein gene gene1939 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09720 SH05_RS09725 SH05_09725 SH05_RS09725 1966551 1967105 + DNA-invertase from lambdoid prophage e14 gene gene1940 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09725 SH05_RS09730 SH05_09730 SH05_RS09730 1967212 1968045 + 5-methylcytosine-specific restriction enzyme A gene gene1941 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09730 SH05_RS09735 SH05_09735 SH05_RS09735 1968546 1968869 - anti-adapter protein IraM interacts RssB preventing the degradation of the stress sigma factor RpoS gene gene1942 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09735 SH05_RS09740 SH05_09740 SH05_RS09740 1969406 1969516 - hypothetical protein gene gene1943 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09740 SH05_RS09745 SH05_09745 SH05_RS09745 1969569 1969973 - DUF1398 domain-containing protein gene gene1944 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09745 SH05_RS09750 SH05_09750 SH05_RS09750 1970194 1970925 - transcriptional regulator gene gene1945 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09750 SH05_RS09755 SH05_09755 SH05_RS09755 1971130 1972341 - blue light- and temperature-regulated antirepressor BluF gene gene1946 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09755 SH05_RS09760 SH05_09760 SH05_RS09760 1972655 1972891 + two-component-system connector protein YcgZ gene gene1947 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09760 SH05_RS09765 SH05_09765 SH05_RS09765 1972934 1973206 + two-component-system connector protein YmgA gene gene1948 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09765 SH05_RS09770 SH05_09770 SH05_RS09770 1973235 1973501 + RcsB connector protein for regulation of biofilm and acid-resistance gene gene1949 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09770 SH05_RS09775 SH05_09775 SH05_RS09775 1973614 1973862 + Blue light%2C low temperature and stress induced protein gene gene1950 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09775 SH05_RS09780 SH05_09780 SH05_RS09780 1974194 1975717 + cyclic-di-GMP phosphodiesterase gene gene1951 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09780 SH05_RS09785 SH05_09785 SH05_RS09785 1975849 1976067 + hypothetical protein gene gene1952 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09785 SH05_RS09790 SH05_09790 SH05_RS09790 1976072 1976200 - hypothetical protein gene gene1953 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09790 SH05_RS09805 SH05_09805 SH05_RS09805 1979171 1979500 - hypothetical protein gene gene1955 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09805 SH05_RS09810 SH05_09810 SH05_RS09810 1979510 1979854 - hypothetical protein gene gene1956 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09810 SH05_RS09815 SH05_09815 SH05_RS09815 1979856 1980029 - hypothetical protein gene gene1957 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09815 SH05_RS09820 SH05_RS09820 SH05_RS09820 1980448 1980773 + ATPase gene gene1958 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09820 SH05_RS09825 SH05_09825 minE minE 1981145 1981411 - cell division topological specificity factor works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell gene gene1959 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09825 SH05_RS09830 SH05_09830 SH05_RS09830 1981415 1982227 - septum site-determining protein MinD ATPase%3B with MinC inhibits cell division by blocking formation of the polar Z ring septums gene gene1960 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09830 SH05_RS09835 SH05_09835 minC minC 1982251 1982946 - septum site-determining protein MinC blocks the formation of polar Z-ring septums gene gene1961 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09835 SH05_RS09840 SH05_09840 SH05_RS09840 1983466 1983834 + hypothetical protein gene gene1962 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09840 SH05_RS09845 SH05_09845 SH05_RS09845 1983937 1984338 - inhibitor of g-type lysozyme gene gene1963 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09845 SH05_RS09850 SH05_09850 SH05_RS09850 1984322 1984537 + hypothetical protein gene gene1964 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09850 SH05_RS09855 SH05_09855 SH05_RS09855 1984547 1984873 + hypothetical protein gene gene1965 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09855 SH05_RS09860 SH05_09860 SH05_RS09860 1984945 1985604 + isomerase/hydrolase gene gene1966 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09860 SH05_RS09865 SH05_09865 SH05_RS09865 1985681 1986142 + hypothetical protein gene gene1967 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09865 SH05_RS09870 SH05_09870 hlyE hlyE 1986349 1987260 - hemolysin E%2C chromosomal Acts by forming a pore-like structure upon contact with mammalian cells gene gene1968 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09870 SH05_RS09875 SH05_09875 SH05_RS09875 1987633 1988052 + protein UmuD binds with UmuC protein to form functional DNA pol V (UmuD'2UmuC)%3B involved in translesion polymerization gene gene1969 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09875 SH05_RS09880 SH05_09880 SH05_RS09880 1988052 1989320 + protein UmuC binds processed UmuD protein to form functional DNA pol V (UmuD'2UmuC)%3B involved in translesion polymerization gene gene1970 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09880 SH05_RS09885 SH05_09885 SH05_RS09885 1989366 1989896 - disulfide bond formation protein B disulfide oxidoreductase%3B integral membrane protein%3B required for perioplasmic disulfide bond formation%3B oxidizes DsbA protein gene gene1971 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09885 SH05_RS09890 SH05_09890 nhaB nhaB 1990042 1991583 - sodium/proton antiporter involved in regulation of intracellular pH under alkaline conditions gene gene1972 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09890 SH05_RS09895 SH05_09895 SH05_RS09895 1991804 1992523 + fatty acid metabolism regulator protein Multifunctional regulator of fatty acid metabolism gene gene1973 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09895 SH05_RS09900 SH05_09900 SH05_RS09900 1992575 1994107 - SpoVR family stationary phase gene gene1974 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09900 SH05_RS09905 SH05_09905 SH05_RS09905 1994437 1995735 + D-amino acid dehydrogenase catalyzes the oxidative deamination of D-amino acids gene gene1975 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09905 SH05_RS09910 SH05_09910 SH05_RS09910 1995745 1996815 + alanine racemase catabolic converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer gene gene1976 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09910 SH05_RS09915 SH05_09915 cvrA cvrA 1997201 1998937 - K+/H+ antiporter NhaP2 the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter%3B can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli gene gene1977 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09915 SH05_RS09920 SH05_09920 ldcA ldcA 1999032 1999946 - murein tetrapeptide carboxypeptidase catalyzes the release of D-alanine from L-alanyl-D-glutamyl-meso-diaminopimelyl-D-alanine gene gene1978 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09920 SH05_RS09925 SH05_09925 emtA emtA 2000046 2000657 + murein transglycosylase catalyzes the cleavage of 1-4 beta-glycoside linkaged between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan gene gene1979 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09925 SH05_RS09930 SH05_09930 SH05_RS09930 2000659 2001393 - flagellar brake protein YcgR gene gene1980 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09930 SH05_RS09935 SH05_09935 SH05_RS09935 2001594 2001848 + hypothetical protein gene gene1981 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09935 SH05_RS09940 SH05_09940 SH05_RS09940 2002026 2002466 + hypothetical protein gene gene1982 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09940 SH05_RS09945 SH05_09945 treA treA 2002545 2004242 - periplasmic trehalase periplasmic%3B catalyzes the hydrolysis of trehalose to glucose which can then be imported into the cell gene gene1983 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09945 SH05_RS09950 SH05_09950 SH05_RS09950 2004562 2005980 - dihydroxyacetone kinase subunit DhaM phosphotransferaese subunit%3B phosphorylates dihydroxyacetone along with DhaK/DhaL gene gene1984 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09950 SH05_RS09955 SH05_09955 SH05_RS09955 2005991 2006623 - dihydroxyacetone kinase subunit DhaL with DhaK and DhaM catalyzes the phosphorylation of dihydroxyacetone gene gene1985 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09955 SH05_RS09960 SH05_09960 SH05_RS09960 2006634 2007704 - dihydroxyacetone kinase subunit DhaK with DhaL and DhaM forms dihydroxyacetone kinase%2C which is responsible for phosphorylating dihydroxyacetone%3B DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase gene gene1986 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09960 SH05_RS09965 SH05_09965 SH05_RS09965 2007932 2009851 + dihydroxyacetone kinase subunit DhaR Positively regulates the dhaKLM operon from a sigma-70 promoter gene gene1987 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09965 SH05_RS09970 SH05_09970 SH05_RS09970 2009951 2012818 - adhesin gene gene1988 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09970 SH05_RS09975 SH05_09975 SH05_RS09975 2013163 2013342 + hypothetical protein gene gene1989 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09975 SH05_RS09980 SH05_09980 ychF ychF 2013587 2014678 - ribosome-binding ATPase YchF EngD%3B translation-associated GTPase%3B the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3)%3B fluorescence spectroscopy revealed nucleic acid binding%3B the yeast protein YBR025c interacts with the translation elongation factor eEF1 gene gene1990 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09980 SH05_RS09985 SH05_09985 SH05_RS09985 2014795 2015379 - peptidyl-tRNA hydrolase gene gene1991 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09985 SH05_RS09990 SH05_09990 SH05_RS09990 2015657 2015935 + membrane protein YchH%3B transcription activated by CRP (cyclic AMP receptor protein)%2C a global transcription factor involved in regulation of metabolism in enteric bacteria%3B ychH presents a class II promoter to bind CRP%3B unknown function gene gene1992 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09990 SH05_RS09995 SH05_09995 SH05_RS09995 2015990 2017642 - transporter role in sulfate transport across the inner membrane%3B member of the SulP family of sulfate transporters%3B seems to mediate transport via sulfate/proton symport gene gene1993 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS09995 SH05_RS10000 SH05_10000 SH05_RS10000 2017794 2018741 - ribose-phosphate pyrophosphokinase catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP gene gene1994 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10000 SH05_RS10005 SH05_10005 SH05_RS10005 2018892 2019743 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase gene gene1995 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10005 SH05_RS10010 SH05_10010 lolB lolB 2019743 2020366 - outer membrane lipoprotein LolB Incorporates lipoproteins in the outer membrane after they are released by the LolA protein gene gene1996 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10010 SH05_RS10015 SH05_10015 hemA hemA 2020580 2021836 + glutamyl-tRNA reductase catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH%3B the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid%3B functions in porphyrin (tetrapyrroles) biosynthesis%3B the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins gene gene1997 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10015 SH05_RS10020 SH05_10020 prfA prfA 2021878 2022960 + peptide chain release factor 1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1%3B this protein is similar to release factor 2 gene gene1998 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10020 SH05_RS10025 SH05_10025 SH05_RS10025 2022960 2023793 + release factor glutamine methyltransferase HemK%3B PrmC%3B transfers a methyl group from S-adenosylmethionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB gene gene1999 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10025 SH05_RS10030 SH05_10030 SH05_RS10030 2023790 2024182 + protein sirB2 gene gene2000 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10030 SH05_RS10035 SH05_10035 SH05_RS10035 2024186 2024995 + protein sirB1 gene gene2001 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10035 SH05_RS10040 SH05_10040 SH05_RS10040 2025031 2025885 + 2-dehydro-3-deoxyphosphooctonate aldolase catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis gene gene2002 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10040 SH05_RS10045 SH05_10045 SH05_RS10045 2026034 2026168 - hypothetical protein gene gene2003 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10045 SH05_RS10050 SH05_10050 SH05_RS10050 2026569 2026703 - hypothetical protein gene gene2004 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10050 SH05_RS10055 SH05_10055 SH05_RS10055 2027104 2027238 - hypothetical protein gene gene2005 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10055 SH05_RS10060 SH05_10060 SH05_RS10060 2027615 2028715 - sodium/proton antiporter ChaA gene gene2006 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10060 SH05_RS10065 SH05_10065 chaB chaB 2028985 2029215 + cation transport regulator ChaB in Escherichia coli this protein putatively regulates the sodium/proton (also pH-independent calcium/proton) antiporter chaA%3B has weak affinity for calcium and magnesium ions gene gene2007 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10065 SH05_RS10070 SH05_10070 SH05_RS10070 2029373 2030068 + glutathione-specific gamma-glutamylcyclotransferase gene gene2008 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10070 SH05_RS10075 SH05_10075 SH05_RS10075 2030112 2030465 - hypothetical protein gene gene2009 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10075 SH05_RS10080 SH05_10080 SH05_RS10080 2030650 2032044 + invasin gene gene2010 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10080 SH05_RS10085 SH05_10085 SH05_RS10085 2032045 2032695 - transcriptional regulator two-component response regulator NarL%3B phosphorylated by NarQ%3B activates transcription of nitrate and nitrite reductase genes and represses transcription of fumarate reductase gene gene2011 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10085 SH05_RS10090 SH05_10090 SH05_RS10090 2032688 2034484 - nitrate/nitrite two-component system sensor histidine kinase gene gene2012 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10090 SH05_RS10095 SH05_10095 SH05_RS10095 2034510 2034728 + hypothetical protein gene gene2013 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10095 SH05_RS10100 SH05_10100 SH05_RS10100 2034823 2036214 + nitrate/nitrite transporter NarK involved in the transport of nitrate and nitrite gene gene2014 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10100 SH05_RS10105 SH05_10105 narZ narZ 2036730 2040473 + respiratory nitrate reductase 1 alpha chain with NarYV catalyzes the reduction of nitrate%3B the beta subunit is an iron sulfur cluster containing electron transfer subunit%3B one of 3 nitrate reductases in E. coli%3B expression of nitrate reductase Z is not dependent on nitrate levels gene gene2015 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10105 SH05_RS10110 SH05_10110 narH narH 2040470 2042008 + nitrate reductase subunit beta with NarGJI catalyzes the reduction of nitrate%3B the beta subunit is an iron sulfur cluster containing electron transfer subunit%3B one of 3 nitrate reductases in E. coli and in E. coli is expressed when nitrate levels are high gene gene2016 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10110 SH05_RS10115 SH05_10115 SH05_RS10115 2042005 2042715 + nitrate reductase molybdenum cofactor assembly chaperone NarJ delta subunit of nitrate reductase 1%3B chaperone for the insertion of the molybdenum cofactor and assembly of nitrate reductase 1 gene gene2017 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10115 SH05_RS10120 SH05_10120 narI narI 2042715 2043392 + respiratory nitrate reductase subunit gamma with NarGJH catalyzes the reduction of nitrate%3B the gamma subunit localizes NarGHI to the membrane%3B one of 3 nitrate reductases in E. coli and in E. coli is expressed when nitrate levels are high gene gene2018 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10120 SH05_RS10125 SH05_10125 SH05_RS10125 2043575 2043850 + hypothetical protein gene gene2019 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10125 SH05_RS10130 SH05_10130 SH05_RS10130 2044110 2044194 - tRNA-Tyr tRNA gene2020 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10130 SH05_RS10135 SH05_10135 SH05_RS10135 2044404 2044488 - tRNA-Tyr tRNA gene2021 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10135 SH05_RS10140 SH05_10140 SH05_RS10140 2044648 2045490 - formyltetrahydrofolate deformylase gene gene2022 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10140 SH05_RS10145 SH05_10145 SH05_RS10145 2045540 2045998 - hypothetical protein gene gene2023 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10145 SH05_RS10150 SH05_10150 SH05_RS10150 2046111 2047016 + NTE family protein RssA gene gene2024 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10150 SH05_RS10155 SH05_RS10155 SH05_RS10155 2047108 2048121 + response regulator of RpoS gene gene2025 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10155 SH05_RS10160 SH05_10160 SH05_RS10160 2048323 2049231 + UTP--glucose-1-phosphate uridylyltransferase together with GalF subunit composes the UTP--glucose-1-phosphate uridylyltransferase%2C an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate%3B regulates cellular levels of UDP-glucose gene gene2026 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10160 SH05_RS10165 SH05_10165 SH05_RS10165 2049375 2049788 - DNA-binding protein H-NS gene gene2027 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10165 SH05_RS10170 SH05_10170 SH05_RS10170 2050393 2051010 + thymidine kinase catalyzes the formation of thymidine 5'-phosphate from thymidine gene gene2028 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10170 SH05_RS10175 SH05_10175 SH05_RS10175 2051292 2051882 - transposase gene gene2029 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10175 SH05_RS10180 SH05_RS10180 SH05_RS10180 2051827 2052143 - hypothetical protein gene gene2030 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10180 SH05_RS10185 SH05_10185 SH05_RS10185 2052312 2054987 - aldehyde-alcohol dehydrogenase gene gene2031 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10185 SH05_RS10190 SH05_10190 SH05_RS10190 2055464 2056111 + hypothetical protein gene gene2032 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10190 SH05_RS10195 SH05_10195 SH05_RS10195 2056849 2058480 + peptide ABC transporter substrate-binding protein is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate gene gene2033 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10195 SH05_RS10200 SH05_10200 oppB oppB 2058566 2059486 + peptide ABC transporter permease gene gene2034 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10200 SH05_RS10205 SH05_10205 SH05_RS10205 2059501 2060409 + peptide ABC transporter permease with OppABDF is involved in the transport of oligopeptides of up to 5 amino acids into the cell gene gene2035 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10205 SH05_RS10210 SH05_10210 oppD oppD 2060421 2061434 + oligopeptide transport ATP-binding protein OppD gene gene2036 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10210 SH05_RS10215 SH05_10215 SH05_RS10215 2061431 2062435 + oligopeptide transport ATP-binding protein OppF with OppABCD is involved in the transport of oligopeptides%3B OppF and OppD are ATP-binding proteins gene gene2037 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10215 SH05_RS10220 SH05_10220 SH05_RS10220 2062488 2062817 - hypothetical protein highly acidic protein%3B the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor (Ugi)%3B binds heat-unstable protein (HU-alpha) which is a histone-like protein gene gene2038 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10220 SH05_RS10225 SH05_10225 cls cls 2062852 2064312 - cardiolipin synthase catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol) gene gene2039 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10225 SH05_RS10230 SH05_10230 SH05_RS10230 2064344 2064628 + hypothetical protein gene gene2040 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10230 SH05_RS10235 SH05_10235 SH05_RS10235 2064683 2065936 - voltage-gated potassium channel Kch gene gene2041 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10235 SH05_RS10240 SH05_10240 SH05_RS10240 2066236 2066532 - hypothetical protein unknown function%3B YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase%2C but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity gene gene2042 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10240 SH05_RS10245 SH05_10245 SH05_RS10245 2066756 2067475 + protein TonB membrane spanning protein in TonB-ExbB-ExbD complex%3B transduces proton motive force of the cytoplasmic membrane to outer membrane transporters%3B involved in the transport of ron-siderophore complexes%2C vitamin B12 and colicins gene gene2043 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10245 SH05_RS10250 SH05_10250 SH05_RS10250 2067515 2067913 - acyl-CoA thioester hydrolase YciA gene gene2044 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10250 SH05_RS10255 SH05_10255 SH05_RS10255 2068018 2068557 - intracellular septation protein A Involved in cell division%3B probably involved in intracellular septation gene gene2045 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10255 SH05_RS10260 SH05_10260 SH05_RS10260 2068587 2069330 - hypothetical protein gene gene2046 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10260 SH05_RS10265 SH05_10265 SH05_RS10265 2069687 2070325 + outer membrane protein W receptor for colicin S4 gene gene2047 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10265 SH05_RS10270 SH05_10270 SH05_RS10270 2070385 2070891 - hypothetical protein gene gene2048 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10270 SH05_RS10275 SH05_10275 SH05_RS10275 2070937 2071437 - hypothetical protein gene gene2049 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10275 SH05_RS10280 SH05_10280 SH05_RS10280 2071523 2071702 - hypothetical protein gene gene2050 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10280 SH05_RS10285 SH05_10285 SH05_RS10285 2072083 2072889 - tryptophan synthase subunit alpha gene gene2051 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10285 SH05_RS10290 SH05_10290 SH05_RS10290 2072889 2074082 - tryptophan synthase subunit beta catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate gene gene2052 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10290 SH05_RS10295 SH05_10295 SH05_RS10295 2074094 2075452 - phosphoribosylanthranilate isomerase monomeric bifunctional protein%3B functions in tryptophan biosynthesis pathway%3B phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate gene gene2053 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10295 SH05_RS10300 SH05_10300 SH05_RS10300 2075456 2077051 - bifunctional protein TrpGD bifunctional anthranilate synthase II/anthranilate phosphoribosyltransferase%3B TrpD%3B forms a heterotetramer with Trp E and the complex catalyzes the formation of anthranilate from chorismate and glutamine%3B also catalyzes the formation of N-(5-phospho-D-ribosyl)-anthranilate from athranilate and 5-phospho-alpha-D-ribose 1-diphosphate%3B functions in tryptophan biosynthesis gene gene2054 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10300 SH05_RS10305 SH05_10305 SH05_RS10305 2077051 2078613 - hypothetical protein gene gene2055 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10305 SH05_RS10310 SH05_10310 SH05_RS10310 2078887 2079768 + PHP domain-containing protein YciV gene gene2056 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10310 SH05_RS10315 SH05_10315 SH05_RS10315 2079765 2080385 + RNA binding protein gene gene2057 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10315 SH05_RS10320 SH05_10320 SH05_RS10320 2080413 2082308 + hypothetical protein gene gene2058 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10320 SH05_RS10325 SH05_10325 SH05_RS10325 2082519 2083394 + ribosomal large subunit pseudouridine synthase B catalyzes the synthesis of pseudouridine from uracil-2605 in 23S ribosomal RNA gene gene2059 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10325 SH05_RS10330 SH05_10330 SH05_RS10330 2083434 2084024 - cob(I)yrinic acid a%2Cc-diamide adenosyltransferase catalyzes the formation of adenosylcobalamide from cobinamide and the formation of coenzyme B12 from cob(I)alamin gene gene2060 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10330 SH05_RS10335 SH05_10335 SH05_RS10335 2084021 2084779 - oxoacyl-ACP reductase gene gene2061 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10335 SH05_RS10340 SH05_10340 SH05_RS10340 2084823 2084987 - hypothetical protein gene gene2062 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10340 SH05_RS10345 SH05_10345 SH05_RS10345 2084999 2086048 + protease multicopy suppressor of htrA(degP) gene gene2063 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10345 SH05_RS10350 SH05_10350 SH05_RS10350 2086084 2086335 - hypothetical protein gene gene2064 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10350 SH05_RS10355 SH05_10355 SH05_RS10355 2086440 2086592 + hypothetical protein gene gene2065 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10355 SH05_RS10360 SH05_10360 SH05_RS10360 2086715 2089312 + DNA topoisomerase 1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining%2C maintains net negative superhelicity gene gene2066 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10360 SH05_RS10365 SH05_10365 cysB cysB 2089522 2090496 + transcriptional regulator LysR-type transcriptional regulator%3B contains helix-turn-helix (HTH) motif%3B in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon%3B autoregulates expression%3B crystal structure of Klebsiella aerogenes showed tetramer formation gene gene2067 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10365 SH05_RS10370 SH05_10370 SH05_RS10370 2090827 2090955 + hypothetical protein gene gene2068 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10370 SH05_RS10375 SH05_10375 SH05_RS10375 2090958 2091125 + hypothetical protein gene gene2069 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10375 SH05_RS10380 SH05_10380 SH05_RS10380 2091199 2091324 - hypothetical protein gene gene2070 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10380 SH05_RS10385 SH05_10390 SH05_RS10385 2091498 2094173 + aconitate hydratase Catalyzes the conversion of citrate to isocitrate gene gene2071 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10385 SH05_RS10390 SH05_10395 ribA ribA 2094237 2094827 - GTP cyclohydrolase-2 catalyzes the conversion of GTP to formate and 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate gene gene2072 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10390 SH05_RS10395 SH05_10400 SH05_RS10395 2094997 2095761 + phosphatidylglycerophosphatase B gene gene2073 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10395 SH05_RS10400 SH05_10405 SH05_RS10400 2095910 2096218 + LPS assembly protein A gene gene2074 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10400 SH05_RS10405 SH05_10410 SH05_RS10405 2096225 2097394 + LPS assembly protein B gene gene2075 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10405 SH05_RS10410 SH05_10415 SH05_RS10410 2097588 2098325 + orotidine 5'-phosphate decarboxylase gene gene2076 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10410 SH05_RS10415 SH05_10420 SH05_RS10415 2098325 2098651 + initiation factor function involved in start site selection during the initiation of translation gene gene2077 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10415 SH05_RS10420 SH05_10425 SH05_RS10420 2098777 2098995 - osmotically-inducible lipoprotein B gene gene2078 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10420 SH05_RS10425 SH05_10430 SH05_RS10425 2099264 2100013 - DeoR family transcriptional regulator gene gene2079 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10425 SH05_RS10430 SH05_10435 SH05_RS10430 2100103 2100276 - hypothetical protein gene gene2080 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10430 SH05_RS10435 SH05_10440 SH05_RS10435 2100424 2102409 - cyclic di-GMP phosphodiesterase Gmr c-di-GMP phosphodiesterase%3B probably degrades signalling molecule c-di-GMP gene gene2081 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10435 SH05_RS10440 SH05_10445 SH05_RS10440 2102463 2102567 + hypothetical protein gene gene2082 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10440 SH05_RS10445 SH05_10450 SH05_RS10445 2102645 2104579 - exoribonuclease 2 Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction gene gene2083 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10445 SH05_RS10450 SH05_10455 SH05_RS10450 2104647 2105774 - oxidoreductase gene gene2084 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10450 SH05_RS10455 SH05_10460 SH05_RS10455 2105918 2106706 - enoyl-ACP reductase [NADH] Catalyzes a key regulatory step in fatty acid biosynthesis gene gene2085 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10455 SH05_RS10460 SH05_10470 SH05_RS10460 2107074 2107424 - hypothetical protein gene gene2086 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10460 SH05_RS10465 SH05_10475 SH05_RS10465 2107495 2108301 - peptide transport system ATP-binding protein SapF gene gene2087 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10465 SH05_RS10470 SH05_10480 SH05_RS10470 2108303 2109295 - peptide transport system ATP-binding protein SapD involved in resistance to antimibial peptides gene gene2088 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10470 SH05_RS10475 SH05_10485 SH05_RS10475 2109295 2110185 - peptide ABC transporter permease gene gene2089 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10475 SH05_RS10480 SH05_10490 SH05_RS10480 2110172 2111137 - peptide ABC transporter permease gene gene2090 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10480 SH05_RS10485 SH05_10495 SH05_RS10485 2111134 2112777 - peptide ABC transporter substrate-binding protein gene gene2091 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10485 SH05_RS10490 SH05_10500 SH05_RS10490 2112820 2113020 - hypothetical protein gene gene2092 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10490 SH05_RS10495 SH05_10505 SH05_RS10495 2113090 2113335 - DUF2543 domain-containing protein gene gene2093 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10495 SH05_RS10500 SH05_10510 SH05_RS10500 2113469 2114854 - putrescine importer PuuP gene gene2094 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10500 SH05_RS10505 SH05_10515 SH05_RS10505 2115157 2116575 - gamma-glutamylputrescine synthetase PuuA gene gene2095 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10505 SH05_RS10510 SH05_10520 puuD puuD 2116787 2117551 + gamma-glutamyl-gamma-aminobutyrate hydrolase catalyzes the degradation of gamma-glutamyl-gamma-aminobutyrate into glutamate and gamma-aminobutyrate gene gene2096 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10510 SH05_RS10515 SH05_10525 SH05_RS10515 2117578 2118135 + transcriptional regulator regulates genes involved in putrescine degradation gene gene2097 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10515 SH05_RS10520 SH05_10530 SH05_RS10520 2118410 2119897 + aldehyde dehydrogenase PuuC gene gene2098 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10520 SH05_RS10525 SH05_10535 SH05_RS10525 2119899 2121179 + gamma-glutamylputrescine oxidoreductase catalyzes the formation of gamma-glutamyl-gamma-aminobutyraldehyde from gamma-glutamylputrescine gene gene2099 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10525 SH05_RS10530 SH05_10540 SH05_RS10530 2121217 2122482 + 4-aminobutyrate aminotransferase catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate gene gene2100 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10530 SH05_RS10535 SH05_10545 pspF pspF 2122602 2123579 - psp operon transcriptional activator transcriptional activator for pspABCE which are induced in response to phage proteins%2C membrane altering stresses%2C and impaired proton expor gene gene2101 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10535 SH05_RS10540 SH05_10550 SH05_RS10540 2123746 2124414 + phage shock protein A involved in maintaining membrane potential under membrane stress conditions%3B also acts as a negative transcriptional regulator of the phage shock protein (psp) operon(pspABCDE) by regulating the transcriptional activator PspF gene gene2102 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10540 SH05_RS10545 SH05_10555 pspB pspB 2124468 2124692 + phage shock protein B DNA-binding transcriptional regulator%3B acts together with PspC to induce psp operon during infection with phage%2C exposure to ethanol or osmotic shock%3B forms a complex with PspA and C%3B PspC is required for PspAB binding gene gene2103 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10545 SH05_RS10550 SH05_10560 SH05_RS10550 2124692 2125051 + phage shock protein C with PsbB forms toxin/antitoxin pair%3B activates the psp operon in response to phage infection%2C exposure to ethanol or osmotic shock gene gene2104 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10550 SH05_RS10555 SH05_10565 SH05_RS10555 2125060 2125281 + phage shock protein D gene gene2105 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10555 SH05_RS10560 SH05_10570 SH05_RS10560 2125356 2125670 + thiosulfate sulfurtransferase PspE rhodanese%3B catalyzes the formation of thiocyanate from thiosulfate and hydrogen cyanide gene gene2106 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10560 SH05_RS10565 SH05_10575 SH05_RS10565 2125883 2127562 + alpha amylase catalytic domain family protein gene gene2107 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10565 SH05_RS10570 SH05_10580 SH05_RS10570 2127576 2128868 + sugar ABC transporter substrate-binding protein gene gene2108 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10570 SH05_RS10575 SH05_10585 SH05_RS10575 2128889 2129770 + ABC transporter permease gene gene2109 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10575 SH05_RS10580 SH05_10590 SH05_RS10580 2129757 2130599 + sugar ABC transporter permease gene gene2110 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10580 SH05_RS10585 SH05_10595 SH05_RS10585 2130630 2131682 + Zn-dependent NAD(P)-binding oxidoreductase gene gene2111 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10585 SH05_RS10590 SH05_10600 SH05_RS10590 2131701 2132489 + hypothetical protein gene gene2112 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10590 SH05_RS10595 SH05_10605 SH05_RS10595 2132499 2133554 + NADH-binding oxidoreductase gene gene2113 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10595 SH05_RS10600 SH05_10610 SH05_RS10600 2133551 2135818 + family 65 glycosyl hydrolase gene gene2114 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10600 SH05_RS10605 SH05_10615 SH05_RS10605 2135815 2136474 + beta-phosphoglucomutase catalyzes the interconversion of beta-D-glucose 6-phosphate to beta-D-glucose 1-phosphate gene gene2115 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10605 SH05_RS10610 SH05_RS10610 SH05_RS10610 2136488 2137569 + sugar ABC transporter ATP-binding protein gene gene2116 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10610 SH05_RS10615 SH05_10625 SH05_RS10615 2137614 2138519 + outer membrane protein G gene gene2117 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10615 SH05_RS10620 SH05_10630 SH05_RS10620 2138630 2139628 - LacI family transcriptional regulator gene gene2118 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10620 SH05_RS10625 SH05_10635 SH05_RS10625 2139784 2141181 + DUF463 domain-containing protein gene gene2119 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10625 SH05_RS10630 SH05_10640 SH05_RS10630 2141178 2142239 + hypothetical protein gene gene2120 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10630 SH05_RS10635 SH05_10645 SH05_RS10635 2142387 2143928 + transcriptional regulator regulates genes involved in the biosynthesis and transport of aromatic amino acids gene gene2121 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10635 SH05_RS10640 SH05_10650 tpx tpx 2143972 2144478 - thiol peroxidase antioxidant activity%3B thioredoxin-dependent thiol peroxidase%3B forms homodimers in solution%3B shows substrate specificity to alkyl hydroperoxides%3B periplasmic protein gene gene2122 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10640 SH05_RS10645 SH05_10655 SH05_RS10645 2144597 2145562 + L-Ala-D/L-Glu epimerase catalyzes the epimerization of L-alanyl-D-glutamate to L-alanyl-L-glutamate gene gene2123 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10645 SH05_RS10650 SH05_10660 SH05_RS10650 2145537 2146265 - protein MpaA gene gene2124 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10650 SH05_RS10655 SH05_10665 SH05_RS10655 2146347 2146529 - hypothetical protein gene gene2125 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10655 SH05_RS10660 SH05_10670 SH05_RS10660 2146600 2147520 - S9 homolog non-peptidase gene gene2126 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10660 SH05_RS10665 SH05_10675 SH05_RS10665 2147658 2148557 + transcriptional regulator gene gene2127 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10665 SH05_RS10670 SH05_10680 SH05_RS10670 2148646 2148771 + hypothetical protein gene gene2128 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10670 SH05_RS10675 SH05_10685 SH05_RS10675 2148894 2150507 + periplasmic murein peptide-binding protein is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate gene gene2129 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10675 SH05_RS10680 SH05_10690 SH05_RS10680 2150558 2151589 - low conductance mechanosensitive channel YnaI gene gene2130 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10680 SH05_RS10685 SH05_10695 SH05_RS10685 2151779 2152759 + transposase gene gene2131 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10685 SH05_RS10690 SH05_10700 SH05_RS10690 2153032 2153289 + DUF2534 domain-containing protein gene gene2132 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10690 SH05_RS10695 SH05_10705 SH05_RS10695 2153339 2154289 - universal stress protein E with UspC and UspD is involved in resistance to UV irradiation gene gene2133 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10695 SH05_RS10700 SH05_10710 SH05_RS10700 2154441 2155193 - fumarate and nitrate reduction regulatory protein Global transcription factor that controls the expression of over 100 target genes in response to anoxia gene gene2134 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10700 SH05_RS10705 SH05_10715 SH05_RS10705 2155388 2155903 - methylated-DNA--protein-cysteine methyltransferase gene gene2135 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10705 SH05_RS10710 SH05_10720 SH05_RS10710 2155914 2157440 - p-aminobenzoyl-glutamate transporter gene gene2136 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10710 SH05_RS10715 SH05_10725 SH05_RS10715 2157370 2157564 - hypothetical protein gene gene2137 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10715 SH05_RS10720 SH05_10730 SH05_RS10720 2157477 2158922 - p-aminobenzoyl-glutamate hydrolase subunit B gene gene2138 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10720 SH05_RS10725 SH05_10735 SH05_RS10725 2158922 2160232 - p-aminobenzoyl-glutamate hydrolase subunit A gene gene2139 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10725 SH05_RS10730 SH05_10740 SH05_RS10730 2160408 2161316 + transcriptional regulator gene gene2140 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10730 SH05_RS10735 SH05_RS10735 SH05_RS10735 2161388 2161498 - glutamate decarboxylase gene gene2141 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10735 SH05_RS10740 SH05_10750 SH05_RS10740 2161646 2162209 + DNA endonuclease SmrA gene gene2142 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10740 SH05_RS10745 SH05_10755 SH05_RS10745 2162230 2163462 - diguanylate cyclase gene gene2143 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10745 SH05_RS10750 SH05_10760 zntB zntB 2163717 2164700 + zinc transporter ZntB gene gene2144 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10750 SH05_RS10755 SH05_10765 SH05_RS10755 2164975 2165148 + hypothetical protein gene gene2145 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10755 SH05_RS10760 SH05_10770 SH05_RS10760 2165178 2166551 + ATP-dependent RNA helicase DbpA exhibits an RNA-dependent ATPase activity%2C specifically stimulated by bacterial 23S rRNA gene gene2146 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10760 SH05_RS10765 SH05_10775 SH05_RS10765 2166680 2167615 - tRNA 2-thiocytidine biosynthesis protein TtcA TtcA%3B YdaO%3B catalyzes the thiolation of cytosine 32 in specific tRNAs%3B forms 2-thiocytidine (s(2)C) gene gene2147 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10765 SH05_RS10770 SH05_10780 SH05_RS10770 2167667 2167807 - integrase gene gene2148 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10770 SH05_RS10775 SH05_10785 SH05_RS10775 2168904 2169119 - Rac prophage%3B conserved protein gene gene2149 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10775 SH05_RS10780 SH05_10790 SH05_RS10780 2169198 2169407 - double-strand break reduction protein Rac prophage gene gene2150 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10780 SH05_RS10785 SH05_10795 lar lar 2169400 2169594 - restriction alleviation and modification enhancement protein seems to be involved in restriction alleviation and enhancement of modification by EcoKI%2C but not in restriction alleviation of type III restriction systems%3B Rac prophage gene gene2151 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10785 SH05_RS10790 SH05_10800 recT recT 2169651 2170460 - DNA recombination protein RecT gene gene2152 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10790 SH05_RS10795 SH05_10805 SH05_RS10795 2170453 2173053 - exodeoxyribonuclease 8 The RecE (also known as exonuclease VIII) pathway is an alternative pathway for the initiation of homologous recombination in Escherichia coli. The RecE pathway is activated in recB%2C recC sbcA (suppressors of recB and recC) mutants. Activation of the RecE pathway results in the production of at least two phage proteins relevant for recombinational repair. RecE is a duplex DNA-specific exonuclease which produces 3' overhangs in duplex DNA by preferentially degrading the 5'-ending strands. Recombinational repair of E.coli chromosomal DNA involves as well other proteins: RecA%2C RecF%2C RecJ%2C RecO%2C RecR%2C and RuvC. gene gene2153 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10795 SH05_RS10800 SH05_10810 SH05_RS10800 2173155 2173430 - protein RacC Rac prophage hypothetical protein gene gene2154 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10800 SH05_RS10805 SH05_10815 SH05_RS10805 2173505 2173681 - hypothetical protein gene gene2155 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10805 SH05_RS10810 SH05_10820 kil kil 2173675 2173896 - killing protein KilR Rac prophage Kil protein%3B Kil overexpression leads to morphological defects and inhibits cell division gene gene2156 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10810 SH05_RS10815 SH05_10825 SH05_RS10815 2174338 2174826 + superinfection exclusion protein B gene gene2157 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10815 SH05_RS10820 SH05_10830 SH05_RS10820 2175432 2175908 - Rac prophage repressor gene gene2159 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10820 SH05_RS10825 SH05_10835 SH05_RS10825 2176032 2176328 + transcriptional regulator gene gene2160 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10825 SH05_RS10830 SH05_10840 SH05_RS10830 2176351 2176773 + Rac prophage%3B uncharacterized protein gene gene2161 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10830 SH05_RS10835 SH05_10845 SH05_RS10835 2176786 2177643 + Rac prophage%3B conserved protein gene gene2162 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10835 SH05_RS10840 SH05_10850 SH05_RS10840 2177650 2178396 + Rac prophage%3B DNA replication protein gene gene2163 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10840 SH05_RS10845 SH05_RS10845 SH05_RS10845 2178419 2178871 + hypothetical protein gene gene2164 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10845 SH05_RS10850 SH05_10860 SH05_RS10850 2178862 2179311 + endopeptidase gene gene2165 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10850 SH05_RS10855 SH05_10865 SH05_RS10855 2179449 2180906 + Trk system potassium uptake protein TrkG gene gene2166 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10855 SH05_RS10860 SH05_10870 SH05_RS10860 2181043 2181306 + Rac prophage%3B conserved protein gene gene2167 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10860 SH05_RS10865 SH05_10875 SH05_RS10865 2181287 2181646 + hypothetical protein gene gene2168 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10865 SH05_RS10870 SH05_10880 SH05_RS10870 2181754 2181954 + hypothetical protein gene gene2169 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10870 SH05_RS10875 SH05_10885 SH05_RS10875 2182120 2183148 + hypothetical protein gene gene2170 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10875 SH05_RS10880 SH05_RS10880 SH05_RS10880 2183055 2183270 + enterobacterial Ail/Lom family protein gene gene2171 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10880 SH05_RS10885 SH05_10895 SH05_RS10885 2183412 2184392 - transposase gene gene2172 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10885 SH05_RS10890 SH05_RS10890 SH05_RS10890 2184462 2184650 + enterobacterial Ail/Lom family protein gene gene2173 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10890 SH05_RS10895 SH05_10905 SH05_RS10895 2184651 2184824 - hypothetical protein gene gene2174 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10895 SH05_RS10900 SH05_10910 SH05_RS10900 2185212 2185949 - hypothetical protein gene gene2175 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10900 SH05_RS10905 SH05_10915 SH05_RS10905 2186080 2188077 + membrane protein gene gene2176 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10905 SH05_RS10910 SH05_10920 SH05_RS10910 2188077 2188652 + Tail fiber assembly protein homolog from lambdoid prophage Rac gene gene2177 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10910 SH05_RS10915 SH05_10925 SH05_RS10915 2188750 2189340 - Rac prophage%3B site-specific recombinase gene gene2178 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10915 SH05_RS10920 SH05_10930 SH05_RS10920 2189657 2189890 - cold-shock protein gene gene2179 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10920 SH05_RS10925 SH05_10935 SH05_RS10925 2190851 2191285 - universal stress protein F gene gene2180 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10925 SH05_RS10930 SH05_10940 SH05_RS10930 2191426 2192559 - outer membrane protein N allows for ions and hydrophilic solutes to cross the outer membrane gene gene2181 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10930 SH05_RS10935 SH05_10945 SH05_RS10935 2192926 2196450 - pyruvate-flavodoxin oxidoreductase gene gene2182 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10935 SH05_RS10940 SH05_10950 SH05_RS10940 2196724 2196990 + DUF333 domain-containing protein gene gene2183 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10940 SH05_RS10945 SH05_10955 SH05_RS10945 2196987 2197409 - heat-shock protein HslJ gene gene2184 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10945 SH05_RS10950 SH05_10960 SH05_RS10950 2197520 2198509 - lactate dehydrogenase fermentative%3B catalyzes the formationof pyruvate from lactate gene gene2185 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10950 SH05_RS10955 SH05_RS10955 SH05_RS10955 2198717 2201296 + hypothetical protein gene gene2186 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10955 SH05_RS10960 SH05_10970 SH05_RS10960 2201353 2201538 + lipoprotein gene gene2187 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10960 SH05_RS10965 SH05_10975 SH05_RS10965 2201546 2201872 + DUF1318 domain-containing protein gene gene2188 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10965 SH05_RS10970 SH05_10980 SH05_RS10970 2202044 2202949 - transcriptional activator FeaR activator of genes involved in phenylacetic acid catabolism gene gene2189 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10970 SH05_RS10975 SH05_10985 SH05_RS10975 2203185 2204684 + phenylacetaldehyde dehydrogenase gene gene2190 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10975 SH05_RS10980 SH05_10990 tynA tynA 2204742 2207015 - primary amine oxidase catalyzes the formation of phenylacetaldehyde from 2-phenylethylamine gene gene2191 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10980 SH05_RS10985 SH05_10995 SH05_RS10985 2207263 2209308 - bifunctional protein PaaZ catalyzes the ring cleavage reaction in phenylacetate degradation and the formation of 3-hydroxyacyl-CoA from crotonyl-CoA gene gene2192 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10985 SH05_RS10990 SH05_11000 paaA paaA 2209593 2210522 + 1%2C2-phenylacetyl-CoA epoxidase subunit A with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA gene gene2193 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10990 SH05_RS10995 SH05_11005 paaB paaB 2210534 2210821 + 1%2C2-phenylacetyl-CoA epoxidase subunit B with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA%3B involved in phenylacetate degradation gene gene2194 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS10995 SH05_RS11000 SH05_11010 SH05_RS11000 2210830 2211576 + 1%2C2-phenylacetyl-CoA epoxidase subunit C gene gene2195 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11000 SH05_RS11005 SH05_11015 SH05_RS11005 2211591 2212088 + 1%2C2-phenylacetyl-CoA epoxidase gene gene2196 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11005 SH05_RS11010 SH05_11020 SH05_RS11010 2212096 2213166 + 1%2C2-phenylacetyl-CoA epoxidase subunit E gene gene2197 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11010 SH05_RS11015 SH05_11025 SH05_RS11015 2213163 2213930 + 2%2C3-dehydroadipyl-CoA hydratase gene gene2198 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11015 SH05_RS11020 SH05_11030 SH05_RS11020 2213930 2214718 + 1%2C2-epoxyphenylacetyl-CoA isomerase Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA gene gene2199 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11020 SH05_RS11025 SH05_11035 SH05_RS11025 2214720 2216147 + 3-hydroxyadipyl-CoA dehydrogenase gene gene2200 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11025 SH05_RS11030 SH05_11040 SH05_RS11030 2216137 2216559 + acyl-CoA thioesterase gene gene2201 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11030 SH05_RS11035 SH05_11045 SH05_RS11035 2216559 2217764 + 3-oxoadipyl-CoA/3-oxo-5%2C6-dehydrosuberyl-CoA thiolase catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA gene gene2202 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11035 SH05_RS11040 SH05_11050 SH05_RS11040 2217791 2219104 + phenylacetate-CoA ligase gene gene2203 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11040 SH05_RS11045 SH05_11055 SH05_RS11045 2219205 2220155 + transcriptional regulator gene gene2204 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11045 SH05_RS11050 SH05_11060 SH05_RS11050 2220137 2220727 + phenylacetic acid degradation protein PaaY involved in the synthesis of a cofactor required for carnitine dehydratase and carnitine racemase activities gene gene2205 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11050 SH05_RS11055 SH05_RS11055 SH05_RS11055 2221058 2223583 + hypothetical protein gene gene2206 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11055 SH05_RS11060 SH05_11070 SH05_RS11060 2223587 2224492 - integrase gene gene2207 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11060 SH05_RS11065 SH05_11075 SH05_RS11065 2224450 2224815 - transposase represses IS2 gene transcription gene gene2208 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11065 SH05_RS11070 SH05_11080 SH05_RS11070 2225024 2226175 + transposase gene gene2209 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11070 SH05_RS11075 SH05_11085 SH05_RS11075 2226356 2229679 + autotransporter subunit beta gene gene2210 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11075 SH05_RS11080 SH05_11090 SH05_RS11080 2229887 2230747 + oxidoreductase gene gene2211 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11080 SH05_RS11085 SH05_11095 SH05_RS11085 2230810 2233116 + hypothetical protein gene gene2212 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11085 SH05_RS11090 SH05_11100 SH05_RS11090 2233287 2233892 + hypothetical protein gene gene2213 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11090 SH05_RS11095 SH05_11105 SH05_RS11095 2233892 2234788 + CDP-diglyceride synthase gene gene2214 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11095 SH05_RS11100 SH05_11110 SH05_RS11100 2234804 2236561 + esterase gene gene2215 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11100 SH05_RS11105 SH05_11115 SH05_RS11105 2236551 2237867 + hypothetical protein gene gene2216 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11105 SH05_RS11110 SH05_11120 SH05_RS11110 2237921 2238526 - FMN-dependent NADH-azoreductase FMN-dependent%3B requires NADH%3B catalyzes the cleavage of azo bond in aromatic azo compounds gene gene2217 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11110 SH05_RS11115 SH05_11125 SH05_RS11115 2238727 2242629 + ATP-dependent RNA helicase HrpA involved in the post-transcriptional processing of the daa operon mRNA%2C which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain gene gene2218 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11115 SH05_RS11120 SH05_11130 SH05_RS11120 2242901 2243701 + hypothetical protein gene gene2219 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11120 SH05_RS11125 SH05_11135 SH05_RS11125 2243898 2245337 + lactaldehyde dehydrogenase NAD-linked gene gene2220 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11125 SH05_RS11130 SH05_11140 SH05_RS11130 2245379 2245630 - glyceraldehyde-3-phosphate dehydrogenase gene gene2221 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11130 SH05_RS11135 SH05_11145 SH05_RS11135 2245627 2246004 - glyceraldehyde-3-phosphate dehydrogenase gene gene2222 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11135 SH05_RS11140 SH05_11150 SH05_RS11140 2246263 2246379 - glyceraldehyde-3-phosphate dehydrogenase gene gene2223 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11140 SH05_RS11145 SH05_11155 SH05_RS11145 2246568 2247098 + cytochrome B561 B-type di-heme cytochrome with a major alpha-absorption peak at 561 nm and a minor peak at 555 nm gene gene2224 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11145 SH05_RS11150 SH05_11160 SH05_RS11150 2247343 2247516 + periplasmic protein gene gene2225 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11150 SH05_RS11155 SH05_11165 SH05_RS11155 2247588 2247737 - protein HokB gene gene2226 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11155 SH05_RS11160 SH05_11170 SH05_RS11160 2248136 2249776 + methyl-accepting chemotaxis protein III gene gene2227 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11160 SH05_RS11165 SH05_11175 SH05_RS11165 2249814 2250737 - transcriptional regulator gene gene2228 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11165 SH05_RS11170 SH05_11180 SH05_RS11170 2250954 2252297 + metalloenzyme gene gene2229 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11170 SH05_RS11175 SH05_11185 mdoD mdoD 2252558 2254177 + glucan biosynthesis protein D involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans gene gene2230 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11175 SH05_RS11180 SH05_11190 SH05_RS11180 2254098 2254301 - hypothetical protein gene gene2231 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11180 SH05_RS11185 SH05_11195 SH05_RS11185 2254317 2254541 + hypothetical protein gene gene2232 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11185 SH05_RS11190 SH05_11200 SH05_RS11190 2254604 2255143 + ribosomal-protein-serine acetyltransferase gene gene2233 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11190 SH05_RS11195 SH05_11205 SH05_RS11195 2255135 2256115 - hypothetical protein gene gene2234 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11195 SH05_RS11200 SH05_11210 SH05_RS11200 2256227 2257231 + tellurite resistance protein TehA gene gene2235 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11200 SH05_RS11205 SH05_11215 SH05_RS11205 2257228 2257821 + tellurite methyltransferase with TehA confers resistance to tellurite gene gene2236 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11205 SH05_RS11210 SH05_11220 SH05_RS11210 2258123 2258791 + lipoprotein gene gene2237 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11210 SH05_RS11215 SH05_RS11215 SH05_RS11215 2258824 2259027 + TetR family transcriptional regulator gene gene2238 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11215 SH05_RS11220 SH05_11230 SH05_RS11220 2259028 2259315 - transposase gene gene2239 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11220 SH05_RS11225 SH05_11235 SH05_RS11225 2259383 2260531 + transposase gene gene2240 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11225 SH05_RS11230 SH05_11240 SH05_RS11230 2260571 2261746 - hypothetical protein gene gene2241 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11230 SH05_RS11235 SH05_11245 SH05_RS11235 2261838 2262374 + transcriptional regulator gene gene2242 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11235 SH05_RS11240 SH05_11250 SH05_RS11240 2262447 2264408 + peptidase gene gene2243 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11240 SH05_RS11245 SH05_11255 SH05_RS11245 2264500 2264670 - hypothetical protein gene gene2244 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11245 SH05_RS11250 SH05_11260 SH05_RS11250 2264952 2265128 + mRNA interferase HicA gene gene2245 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11250 SH05_RS11255 SH05_11265 SH05_RS11255 2265153 2265590 + antitoxin gene gene2246 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11255 SH05_RS11260 SH05_11270 SH05_RS11260 2265669 2267075 + transcriptional regulator gene gene2247 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11260 SH05_RS11265 SH05_11275 SH05_RS11265 2267320 2268465 + ABC transporter substrate-binding protein gene gene2248 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11265 SH05_RS11270 SH05_11280 SH05_RS11270 2268483 2269496 + ABC transporter ATPase gene gene2249 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11270 SH05_RS11275 SH05_11285 SH05_RS11275 2269497 2270438 + ABC transporter permease gene gene2250 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11275 SH05_RS11280 SH05_11290 SH05_RS11280 2270428 2271222 + ABC transporter permease gene gene2251 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11280 SH05_RS11285 SH05_11295 SH05_RS11285 2271244 2272668 + gamma-aminobutyraldehyde dehydrogenase catalyzes the formation of 4-aminobutanoate from 4-aminobutanal%3B involved in putrescine degradation gene gene2252 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11285 SH05_RS11290 SH05_11300 SH05_RS11290 2272699 2272896 + hypothetical protein gene gene2253 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11290 SH05_RS11295 SH05_11305 SH05_RS11295 2273055 2273228 + DUF2566 domain-containing protein gene gene2254 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11295 SH05_RS11300 SH05_11310 SH05_RS11300 2273314 2273547 + hypothetical protein gene gene2255 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11300 SH05_RS11305 SH05_11315 SH05_RS11305 2273548 2273997 - hypothetical protein gene gene2256 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11305 SH05_RS11310 SH05_11320 SH05_RS11310 2273994 2274512 - L-amino acid N-acyltransferase MnaT gene gene2257 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11310 SH05_RS11315 SH05_11325 SH05_RS11315 2274693 2275730 + NADPH-dependent curcumin reductase gene gene2258 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11315 SH05_RS11320 SH05_11330 SH05_RS11320 2275928 2276593 + transcriptional regulator gene gene2259 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11320 SH05_RS11325 SH05_11335 SH05_RS11325 2276629 2278731 - TonB-dependent receptor gene gene2260 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11325 SH05_RS11330 SH05_11340 SH05_RS11330 2278973 2280034 + ATP-binding protein%2C periplasmic%2C function unknown gene gene2261 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11330 SH05_RS11335 SH05_11345 SH05_RS11335 2280147 2281646 - L-asparagine permease involved in the transporte of L-asparagine gene gene2262 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11335 SH05_RS11340 SH05_11350 SH05_RS11340 2281913 2282530 + glutathione S-transferase gene gene2263 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11340 SH05_RS11345 SH05_11355 SH05_RS11345 2282606 2282818 + IPR020099 family protein gene gene2264 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11345 SH05_RS11350 SH05_11360 SH05_RS11350 2283805 2285604 + type IV secretion protein Rhs gene gene2265 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11350 SH05_RS11355 SH05_11365 SH05_RS11355 2285588 2286070 + immunity protein for RhsE gene gene2266 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11355 SH05_RS11360 SH05_11370 SH05_RS11360 2286252 2286998 + hypothetical protein gene gene2267 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11360 SH05_RS11365 SH05_11375 SH05_RS11365 2287482 2288618 + hypothetical protein gene gene2268 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11365 SH05_RS11370 SH05_11380 SH05_RS11370 2288718 2288951 + tautomerase PptA 4-OT%3B member of subfamily 5%3B forms a dimer%3B the function in the Escherichia coli cell is unknown gene gene2269 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11370 SH05_RS11375 SH05_11385 SH05_RS11375 2288948 2289517 - flavin reductase like-protein gene gene2270 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11375 SH05_RS11380 SH05_11390 SH05_RS11380 2289690 2290535 + N-hydroxyarylamine O-acetyltransferase catalyzes the addition of the acetyl moity of acetyl-CoA to an N-hydroxy-arylamine to form an N-acetoxyarylamine gene gene2271 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11380 SH05_RS11385 SH05_11395 SH05_RS11385 2290631 2291524 - PhzC-PhzF family protein gene gene2272 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11385 SH05_RS11390 SH05_11400 narI narI 2291603 2292283 - respiratory nitrate reductase subunit gamma with NarGJH catalyzes the reduction of nitrate%3B the gamma subunit localizes NarGHI to the membrane%3B one of 3 nitrate reductases in E. coli and in E. coli is expressed when nitrate levels are high gene gene2273 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11390 SH05_RS11395 SH05_11405 SH05_RS11395 2292280 2292975 - nitrate reductase molybdenum cofactor assembly chaperone NarW delta subunit of nitrate reductase 1%3B chaperone for the insertion of the molybdenum cofactor and assembly of nitrate reductase 1 gene gene2274 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11395 SH05_RS11400 SH05_11410 narH narH 2292975 2294519 - nitrate reductase subunit beta with NarGJI catalyzes the reduction of nitrate%3B the beta subunit is an iron sulfur cluster containing electron transfer subunit%3B one of 3 nitrate reductases in E. coli and in E. coli is expressed when nitrate levels are high gene gene2275 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11400 SH05_RS11405 SH05_11415 narZ narZ 2294516 2298256 - respiratory nitrate reductase 2 alpha chain with NarYV catalyzes the reduction of nitrate%3B the beta subunit is an iron sulfur cluster containing electron transfer subunit%3B one of 3 nitrate reductases in E. coli%3B expression of nitrate reductase Z is not dependent on nitrate levels gene gene2276 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11405 SH05_RS11410 SH05_11420 SH05_RS11410 2298338 2299726 - nitrate/nitrite transporter NarU involved in the transport of nitrate and nitrite gene gene2277 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11410 SH05_RS11415 SH05_RS11415 SH05_RS11415 2300050 2301380 - hypothetical protein gene gene2278 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11415 SH05_RS11420 SH05_11430 SH05_RS11420 2301404 2301694 - lipoprotein gene gene2279 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11420 SH05_RS11425 SH05_11435 SH05_RS11425 2301954 2302778 - aromatic amino acid exporter gene gene2280 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11425 SH05_RS11430 SH05_11440 SH05_RS11430 2303067 2303654 + sulfate ABC transporter substrate-binding protein gene gene2281 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11430 SH05_RS11435 SH05_11445 SH05_RS11435 2303703 2306114 + formate dehydrogenase subunit alpha gene gene2282 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11435 SH05_RS11440 SH05_11450 SH05_RS11440 2306127 2307011 + formate dehydrogenase beta subunit%3B involved in the use of formate as an electron donor during aerobic respiration%3B acts to transfer electrons from the major(alpha subunit) to the cytochrome b556(gamma subunit) gene gene2283 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11440 SH05_RS11445 SH05_11455 SH05_RS11445 2307004 2307657 + formate dehydrogenase nitrate-inducible cytochrome b556(Fdn) subunit cytochrome b556(FDO) component%3B heme containing gene gene2284 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11445 SH05_RS11450 SH05_11460 SH05_RS11450 2308064 2308348 - transcriptional regulator gene gene2285 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11450 SH05_RS11455 SH05_11465 adhP adhP 2308494 2309504 - ethanol-active dehydrogenase/acetaldehyde-active reductase similar to zinc-dependent eukaryotic ADH enzymes and distinct from fermentative ADHs gene gene2286 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11455 SH05_RS11460 SH05_11470 SH05_RS11460 2309638 2311335 - NAD-dependent malic enzyme gene gene2287 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11460 SH05_RS11465 SH05_11475 rpsV rpsV 2311491 2311628 - stationary-phase-induced ribosome-associated protein protein D%3B stationary-phase-induced ribosome-associated%3B in Escherichia coli this protein becomes associated with the ribosome%3B expression increases during stationary phase gene gene2288 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11465 SH05_RS11470 SH05_11480 SH05_RS11470 2311730 2311945 - protein bdm gene gene2289 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11470 SH05_RS11475 SH05_11485 SH05_RS11475 2312290 2312721 + peroxiredoxin OsmC gene gene2290 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11475 SH05_RS11480 SH05_11490 SH05_RS11480 2312777 2313703 - peptide ABC transporter ATP-binding protein gene gene2291 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11480 SH05_RS11485 SH05_11495 SH05_RS11485 2313696 2314682 - peptide ABC transporter ATP-binding protein gene gene2292 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11485 SH05_RS11490 SH05_11500 SH05_RS11490 2314679 2315575 - peptide ABC transporter permease gene gene2293 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11490 SH05_RS11495 SH05_11505 SH05_RS11495 2315572 2316594 - peptide ABC transporter permease gene gene2294 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11495 SH05_RS11500 SH05_11510 SH05_RS11500 2316596 2318146 - peptide ABC transporter substrate-binding protein gene gene2295 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11500 SH05_RS11505 SH05_11515 SH05_RS11505 2318160 2318741 - D-alanyl-D-alanine dipeptidase catalyzes the hydrolysis of D-alanyl-D-alanine dipeptide: Zn dependent%3B involved in peptidoglycan synthesis gene gene2296 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11505 SH05_RS11510 SH05_11520 SH05_RS11510 2318999 2321422 - diguanylate phosphodiesterase heme-regulated phosphodiesterase with phosphodiesterase activity with cGMP%3B cold- and stationary phase-induced bioflim regulator%3B oxygen sensor gene gene2297 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11510 SH05_RS11515 SH05_11525 SH05_RS11515 2321423 2322805 - diguanylate cyclase gene gene2298 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11515 SH05_RS11520 SH05_11530 SH05_RS11520 2323169 2324323 - hypothetical protein gene gene2299 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11520 SH05_RS11525 SH05_11535 SH05_RS11525 2324619 2326154 - glutamate/gamma-aminobutyrate antiporter gene gene2300 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11525 SH05_RS11530 SH05_11540 SH05_RS11530 2326310 2327710 - glutamate decarboxylase beta gene gene2301 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11530 SH05_RS11535 SH05_11545 SH05_RS11535 2327721 2327819 - hypothetical protein gene gene2302 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11535 SH05_RS11540 SH05_11550 SH05_RS11540 2328072 2330855 - zinc protease gene gene2303 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11540 SH05_RS11545 SH05_11555 SH05_RS11545 2330912 2333284 - TonB-dependent receptor gene gene2304 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11545 SH05_RS11550 SH05_11560 SH05_RS11550 2333322 2335007 - ABC transporter ATP-binding protein gene gene2305 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11550 SH05_RS11555 SH05_11565 SH05_RS11555 2335298 2336455 - anaerobic sulfatase maturase gene gene2306 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11555 SH05_RS11560 SH05_11570 SH05_RS11560 2336507 2338189 - Ser-type periplasmic non-aryl sulfatase gene gene2307 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11560 SH05_RS11565 SH05_11575 SH05_RS11565 2338591 2339352 - transcriptional regulator regulates the cellular response to acid resistance gene gene2308 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11565 SH05_RS11570 SH05_11580 SH05_RS11570 2339427 2339624 - two-component-system connector protein SafA gene gene2309 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11570 SH05_RS11575 SH05_11585 SH05_RS11575 2339872 2342151 - hypothetical protein in Escherichia coli it may be involved in repression of type III secretion system (TTSS) genes of the host cell%3B involved with increased resistance to low pH%3B member of the prokaryotic molybdopterin-containing oxidoreductase family gene gene2310 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11575 SH05_RS11580 SH05_11590 SH05_RS11580 2342485 2343399 - fimbrial-like adhesin protein gene gene2311 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11580 SH05_RS11585 SH05_11595 SH05_RS11585 2343458 2343961 - fimbrial-like adhesin protein gene gene2312 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11585 SH05_RS11590 SH05_11600 SH05_RS11590 2343974 2344504 - fimbrial-like adhesin protein gene gene2313 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11590 SH05_RS11595 SH05_11605 SH05_RS11595 2344518 2345666 - fimbrial protein FimD gene gene2314 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11595 SH05_RS11600 SH05_11610 SH05_RS11600 2346022 2346201 - transcriptional regulator gene gene2315 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11600 SH05_RS11605 SH05_11615 SH05_RS11605 2346519 2347841 - serine/threonine protein kinase gene gene2316 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11605 SH05_RS11610 SH05_11620 SH05_RS11610 2347841 2348107 - antitoxin HipB gene gene2317 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11610 SH05_RS11615 SH05_11625 SH05_RS11615 2348330 2349730 - hypothetical protein gene gene2318 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11615 SH05_RS11620 SH05_11630 SH05_RS11620 2349774 2353751 - hypothetical protein gene gene2319 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11620 SH05_RS11625 SH05_11635 SH05_RS11625 2354282 2355874 - autoinducer 2 kinase LsrK gene gene2320 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11625 SH05_RS11630 SH05_11640 SH05_RS11630 2355953 2356906 - LsrR family transcriptional regulator regulates the transcription of lsr genes%3B involved in autoinducer 2 uptake%2C biofilm formation and stress responses gene gene2321 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11630 SH05_RS11635 SH05_11645 SH05_RS11635 2357155 2358690 + autoinducer 2 import ATP-binding protein LsrA gene gene2322 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11635 SH05_RS11640 SH05_11650 SH05_RS11640 2358684 2359712 + autoinducer 2 import system permease LsrC with LsrADB is involved in the transport of autoindiuce 2 gene gene2323 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11640 SH05_RS11645 SH05_11655 SH05_RS11645 2359712 2360704 + autoinducer 2 import system permease LsrD gene gene2324 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11645 SH05_RS11650 SH05_11660 SH05_RS11650 2360716 2361738 + autoinducer 2-binding protein LsrB with lsrACD is involved in the transport of autoinducer 2 into the cell gene gene2325 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11650 SH05_RS11655 SH05_11665 SH05_RS11655 2361765 2362640 + autoinducer-2 (AI-2) aldolase involved in autoinducer 2 transport and processing gene gene2326 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11655 SH05_RS11660 SH05_11670 SH05_RS11660 2362664 2362954 + autoinducer 2-degrading protein LsrG gene gene2327 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11660 SH05_RS11665 SH05_11675 SH05_RS11665 2363011 2363769 + trans-aconitate 2-methyltransferase catalyzes the formation of (E)-3-(methoxycarbonyl)pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate gene gene2328 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11665 SH05_RS11670 SH05_11680 SH05_RS11670 2363773 2364687 - hypothetical protein gene gene2329 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11670 SH05_RS11675 SH05_RS11675 SH05_RS11675 2364637 2364837 + hypothetical protein gene gene2330 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11675 SH05_RS11680 SH05_11690 SH05_RS11680 2364894 2366345 - altronate oxidoreductase catalyzes the formation of D-tagaturonate from D-altronate gene gene2331 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11680 SH05_RS11685 SH05_11695 SH05_RS11685 2366572 2367519 - diguanylate cyclase gene gene2332 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11685 SH05_RS11690 SH05_11700 SH05_RS11690 2367631 2367990 - DUF4186 domain-containing protein gene gene2333 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11690 SH05_RS11695 SH05_11705 SH05_RS11695 2367990 2368916 - glutaminase 2 catalyzes the formation of glutamate from glutamine gene gene2334 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11695 SH05_RS11700 SH05_11710 SH05_RS11700 2368980 2370368 - succinate semialdehyde dehydrogenase [NAD(P)+] Sad gene gene2335 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11700 SH05_RS11705 SH05_11715 SH05_RS11705 2370469 2371350 + transcriptional regulator gene gene2336 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11705 SH05_RS11710 SH05_11720 SH05_RS11710 2371428 2372543 + hypothetical protein gene gene2337 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11710 SH05_RS11715 SH05_11725 SH05_RS11715 2372693 2373883 + sugar efflux transporter gene gene2338 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11715 SH05_RS11720 SH05_11730 SH05_RS11720 2373908 2374573 - membrane protein gene gene2339 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11720 SH05_RS11725 SH05_11735 SH05_RS11725 2374785 2375219 + MarR family transcriptional regulator Repressor of the marRAB operon which is involved in the activation of both antibiotic resistance and oxidative stress genes gene gene2340 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11725 SH05_RS11730 SH05_11740 SH05_RS11730 2375233 2375622 + MDR efflux pump AcrAB transcriptional activator MarA transcriptional activator of genes involved in the multiple antibiotic resistance (Mar) phenotype%3B also activates sodA%2C zwf and micF gene gene2341 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11730 SH05_RS11735 SH05_11745 SH05_RS11735 2375654 2375872 + multiple antibiotic resistance protein MarB gene gene2342 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11735 SH05_RS11740 SH05_11750 SH05_RS11740 2375903 2376802 - amino acid metabolite efflux pump gene gene2343 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11740 SH05_RS11745 SH05_11755 SH05_RS11745 2376997 2378184 + transporter YdeF%3B uncharacterized member of the major facilitator superfamily (MFS) of transporters gene gene2344 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11745 SH05_RS11750 SH05_11760 SH05_RS11750 2378311 2378406 + hypothetical protein gene gene2345 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11750 SH05_RS11755 SH05_11765 SH05_RS11755 2378625 2379515 - diguanylate cyclase required for pgaD induction gene gene2346 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11755 SH05_RS11760 SH05_11770 SH05_RS11760 2379770 2380162 - hydrogen peroxide resistance protein gene gene2347 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11760 SH05_RS11765 SH05_11775 SH05_RS11765 2380438 2380956 + hypothetical protein gene gene2348 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11765 SH05_RS11770 SH05_11780 SH05_RS11770 2381000 2383045 - peptidyl-dipeptidase dcp gene gene2349 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11770 SH05_RS11775 SH05_11785 SH05_RS11775 2383182 2383928 + NADP-dependent 3-hydroxy acid dehydrogenase YdfG NADP(+)-dependent%3B catalyzes the formation of 3-hydroxypropionate from the toxic malonic semialdehyde%2C catalyzes the formation of 2-aminomalonate-semialdehyde from L-serine%3B can also use 3-hydroxybutyrate%2C 3-hydroxy-isobutyrate%2C D-threonine%2C L-allo-threonine%2CD-serine gene gene2350 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11775 SH05_RS11780 SH05_11790 SH05_RS11780 2384017 2384703 + transcriptional regulator gene gene2351 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11780 SH05_RS11785 SH05_11795 SH05_RS11785 2384880 2385083 + hypothetical protein gene gene2352 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11785 SH05_RS11790 SH05_11800 SH05_RS11790 2385118 2386578 - NAD-dependent D-mannonate oxidoreductase gene gene2353 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11790 SH05_RS11795 SH05_11805 SH05_RS11795 2386667 2387950 - transporter gene gene2354 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11795 SH05_RS11800 SH05_11810 SH05_RS11800 2388737 2388970 + cold-shock protein gene gene2355 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11800 SH05_RS11805 SH05_11815 SH05_RS11805 2389287 2389877 + Qin prophage%3B site-specific recombinase gene gene2356 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11805 SH05_RS11810 SH05_11820 SH05_RS11810 2389975 2390550 - Tail fiber assembly protein homolog from lambdoid prophage Qin gene gene2357 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11810 SH05_RS11815 SH05_11825 SH05_RS11815 2390550 2391512 - Side tail fiber protein homolog from lambdoid prophage Qin gene gene2358 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11815 SH05_RS11820 SH05_11830 SH05_RS11820 2391463 2392032 - protein convertase gene gene2359 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11820 SH05_RS11825 SH05_11835 SH05_RS11825 2392421 2392654 + hypothetical protein gene gene2360 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11825 SH05_RS11830 SH05_11840 SH05_RS11830 2392712 2393122 + Qin prophage%3B uncharacterized protein gene gene2361 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11830 SH05_RS11835 SH05_11845 SH05_RS11835 2393274 2393447 - protein GnsB gene gene2362 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11835 SH05_RS11840 SH05_11850 SH05_RS11840 2393619 2393795 - hypothetical protein gene gene2363 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11840 SH05_RS11845 SH05_11855 SH05_RS11845 2394120 2394332 - cold-shock protein CspI gene gene2364 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11845 SH05_RS11850 SH05_11860 SH05_RS11850 2394695 2395192 - Rz-like protein%2C Qin prophage gene gene2365 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11850 SH05_RS11855 SH05_11865 SH05_RS11855 2395189 2395722 - lysozyme from lambdoid prophage Qin gene gene2366 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11855 SH05_RS11860 SH05_11870 SH05_RS11860 2395719 2396030 - Qin prophage%3B uncharacterized protein gene gene2367 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11860 SH05_RS11865 SH05_11875 SH05_RS11865 2396035 2396250 - Lysis protein S homolog from lambdoid prophage Qin gene gene2368 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11865 SH05_RS11870 SH05_11880 SH05_RS11870 2397004 2397219 - cold-shock protein CspB gene gene2369 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11870 SH05_RS11875 SH05_11885 SH05_RS11875 2397520 2397732 + cold-shock protein CspF gene gene2370 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11875 SH05_RS11880 SH05_11890 SH05_RS11880 2398154 2398906 - Antitermination protein Q homolog from lambdoid prophage Qin gene gene2371 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11880 SH05_RS11885 SH05_11895 SH05_RS11885 2398920 2399969 - hypothetical protein gene gene2372 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11885 SH05_RS11890 SH05_11900 SH05_RS11890 2399971 2400249 - hypothetical protein gene gene2373 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11890 SH05_RS11895 SH05_11905 SH05_RS11895 2400316 2400567 - Qin prophage%3B uncharacterized protein gene gene2374 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11895 SH05_RS11900 SH05_11910 SH05_RS11900 2400784 2400939 - protein HokD gene gene2375 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11900 SH05_RS11905 SH05_11915 SH05_RS11905 2401011 2401298 - mRNA interferase RelE gene gene2376 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11905 SH05_RS11910 SH05_11920 SH05_RS11910 2401298 2401537 - antitoxin RelB Qin prophage%3B bifunctional antitoxin of the RelE-RelB toxin-antitoxin system/transcriptional repressor gene gene2377 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11910 SH05_RS11915 SH05_11925 SH05_RS11915 2402070 2402402 + protein FlxA gene gene2378 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11915 SH05_RS11920 SH05_RS11920 SH05_RS11920 2403004 2403301 - hypothetical protein gene gene2379 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11920 SH05_RS11925 SH05_11935 SH05_RS11925 2403285 2403515 - repressor protein of division inhibition gene dicB gene gene2380 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11925 SH05_RS11930 SH05_11940 SH05_RS11930 2403599 2404006 + transcriptional regulator The transcriptional repressor of DicA (divison cell) has a hypothetical DNA binding domain. It represses the transcription of dicB and dicC%2C but its specific role in cellular replication and mode of action are still unknown. gene gene2381 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11930 SH05_RS11935 SH05_11945 SH05_RS11935 2404173 2404328 + Qin prophage%3B uncharacterized protein gene gene2382 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11935 SH05_RS11940 SH05_11950 SH05_RS11940 2404488 2404706 + hypothetical protein gene gene2383 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11940 SH05_RS11945 SH05_11955 SH05_RS11945 2404710 2405003 - hypothetical protein gene gene2384 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11945 SH05_RS11950 SH05_11960 SH05_RS11950 2405274 2405462 + division inhibition protein DicB gene gene2385 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11950 SH05_RS11955 SH05_11965 SH05_RS11955 2405459 2405650 + hypothetical protein gene gene2386 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11955 SH05_RS11960 SH05_11970 SH05_RS11960 2405962 2406273 - cell surface protein gene gene2387 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11960 SH05_RS11965 SH05_RS11965 SH05_RS11965 2406477 2407202 + transposase gene gene2388 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11965 SH05_RS11970 SH05_11980 SH05_RS11970 2407177 2408373 + integrase gene gene2389 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11970 SH05_RS11975 SH05_11985 SH05_RS11975 2408561 2409580 - starvation-sensing protein RspB gene gene2390 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11975 SH05_RS11980 SH05_11990 SH05_RS11980 2409592 2410806 - starvation-sensing protein RspA starvation-sensing protein%3B maybe involved in homoserine lactone degradation gene gene2391 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11980 SH05_RS11985 SH05_11995 SH05_RS11985 2411012 2411338 - membrane protein gene gene2392 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11985 SH05_RS11990 SH05_12000 SH05_RS11990 2411473 2411814 + hypothetical protein gene gene2393 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11990 SH05_RS11995 SH05_12005 SH05_RS11995 2411849 2412409 + spermidine N(1)-acetyltransferase catalyzes the formation of N(1)- and N(8)-acetylspermidine from spermidine gene gene2394 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS11995 SH05_RS12000 SH05_12010 SH05_RS12000 2412412 2413158 - lipoprotein gene gene2395 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12000 SH05_RS12005 SH05_12015 SH05_RS12005 2413230 2413535 + DUF1161 domain-containing protein gene gene2396 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12005 SH05_RS12010 SH05_12020 SH05_RS12010 2413734 2416160 + selenate reductase periplasmic gene gene2397 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12010 SH05_RS12015 SH05_12025 SH05_RS12015 2416248 2418644 + dimethyl sulfoxide reductase subunit A gene gene2398 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12015 SH05_RS12020 SH05_12030 SH05_RS12020 2418655 2419272 + dimethyl sulfoxide reductase oxidoreductase%2C Fe-S subunit%3B terminal electron transfer protein for the reduction of DMSO gene gene2399 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12020 SH05_RS12025 SH05_12035 SH05_RS12025 2419274 2420128 + dimethyl sulfoxide reductase gene gene2400 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12025 SH05_RS12030 SH05_12040 SH05_RS12030 2420171 2420785 + Tat proofreading chaperone DmsD binds to the twin-arginine signal peptides of certain proteins%2C including dimethylsulfoxide reductase and trimethylamine N-oxide reductase that are translocated to the cytoplasmic membrane gene gene2401 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12030 SH05_RS12035 SH05_12045 SH05_RS12035 2420980 2422236 + voltage-gated ClC-type chloride channel ClcB gene gene2402 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12035 SH05_RS12040 SH05_12050 SH05_RS12040 2422189 2422884 - ATP-dependent dethiobiotin synthetase BioD 2 DTB synthetase%3B dethiobiotin synthase%3B involved in production of dethiobiotin from ATP and 7%2C8-diaminononanoate and carbon dioxide%3B contains magnesium gene gene2403 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12040 SH05_RS12045 SH05_12055 SH05_RS12045 2423009 2424229 - protein mlc mlc%2C controls the expression of genes involved in the phosphotransferase and phosphoenolpyruvate systems%2C regulates genes involved in the uptake of sugars gene gene2404 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12045 SH05_RS12050 SH05_12060 SH05_RS12050 2424364 2425257 - LysR family transcriptional regulator gene gene2405 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12050 SH05_RS12055 SH05_12065 SH05_RS12055 2425364 2426617 + transporter gene gene2406 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12055 SH05_RS12060 SH05_12070 SH05_RS12060 2427014 2427349 + hypothetical protein required for growth and survival under moderately acid conditions gene gene2407 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12060 SH05_RS12065 SH05_12075 SH05_RS12065 2427442 2427525 + stationary phase-induced protein gene gene2408 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12065 SH05_RS12070 SH05_12080 SH05_RS12070 2427625 2428446 + peptidase gene gene2409 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12070 SH05_RS12075 SH05_12085 SH05_RS12075 2428485 2428814 - spermidine export protein MdtI with MdtJ is involved in resistance to deoxycholate%2C nalidixic acid%2C fosfomycin%2C and SDS gene gene2410 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12075 SH05_RS12080 SH05_12090 SH05_RS12080 2428801 2429166 - spermidine export protein MdtJ with MdtI is involved in resistance to deoxycholate%2C nalidixic acid%2C fosfomycin%2C and SDS gene gene2411 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12080 SH05_RS12085 SH05_12095 tqsA tqsA 2429578 2430612 + AI-2 transporter TqsA transport of quorum-sensing signal%3B mutations in this gene alters the transport of the quorum-sensing signal autoinducer 2 (AI-2) which affects expression of a large number of genes gene gene2412 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12085 SH05_RS12090 SH05_12100 pntB pntB 2430637 2432025 - NAD(P) transhydrogenase subunit beta catalyzes reversible transfer of hydride ion equivalent between NAD and NADP%3B membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane%3B forms a tetramer composed of two alpha and 2 beta subunits%3B AB-stereospecific enzyme gene gene2413 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12090 SH05_RS12095 SH05_12105 pntA pntA 2432036 2433568 - NAD(P) transhydrogenase subunit alpha forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane%3B involved in catalyzing transfer of hydride ion equivalents between NAD and NADP%3B stereospecific (AB-specific)%3B functions as a proton pump by translocating protons from cytoplasm to periplasm gene gene2414 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12095 SH05_RS12100 SH05_12110 SH05_RS12100 2434092 2435036 + hypothetical protein gene gene2415 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12100 SH05_RS12105 SH05_12115 SH05_RS12105 2435222 2436604 + arginine/ornithine antiporter transporter gene gene2416 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12105 SH05_RS12110 SH05_12120 SH05_RS12110 2436641 2437363 + dihydrofolate reductase FolM gene gene2417 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12110 SH05_RS12115 SH05_12125 SH05_RS12115 2437360 2437695 - membrane protein gene gene2418 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12115 SH05_RS12120 SH05_12130 SH05_RS12120 2437824 2438543 + two-component system response regulator response regulator in two-component regulatory system with RstB gene gene2419 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12120 SH05_RS12125 SH05_12135 SH05_RS12125 2438547 2439848 + two-component system sensor histidine kinase gene gene2420 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12125 SH05_RS12130 SH05_12140 SH05_RS12130 2439924 2440853 + DNA replication terminus site-binding protein binds to DNA replication terminator sequences to prevent passage of replication forks gene gene2421 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12130 SH05_RS12135 SH05_12145 fumC fumC 2440850 2442253 - fumarate hydratase class II class II family (does not require metal)%3B tetrameric enzyme%3B fumarase C%3B reversibly converts (S)-malate to fumarate and water%3B functions in the TCA cycle gene gene2422 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12135 SH05_RS12140 SH05_12150 SH05_RS12140 2442396 2444042 - fumarate hydratase class I%2C aerobic catalyzes the formation of malate from fumerate gene gene2423 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12140 SH05_RS12145 SH05_12155 SH05_RS12145 2444241 2445416 + mannose-6-phosphate isomerase catalyzes the formation of of fructose 6-phosphate from mannose 6-phosphate gene gene2424 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12145 SH05_RS12150 SH05_12160 SH05_RS12150 2445517 2447025 + hypothetical protein gene gene2425 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12150 SH05_RS12155 SH05_12165 SH05_RS12155 2447251 2448516 - porin gene gene2426 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12155 SH05_RS12160 SH05_12170 SH05_RS12160 2448555 2449928 - glucuronide carrier protein gene gene2427 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12160 SH05_RS12165 SH05_12175 SH05_RS12165 2449925 2451736 - beta-glucuronidase gene gene2428 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12165 SH05_RS12170 SH05_12180 SH05_RS12170 2452127 2452717 - transcriptional regulator gene gene2429 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12170 SH05_RS12175 SH05_12185 SH05_RS12175 2452938 2453705 - 7-alpha-hydroxysteroid dehydrogenase Acts on the hydroxyl group at position 7 of the steroid frame gene gene2430 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12175 SH05_RS12180 SH05_12190 SH05_RS12180 2453817 2454845 - maltose regulon regulatory protein MalI regulates malXY which are involved in maltose-glucose transport gene gene2431 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12180 SH05_RS12185 SH05_12195 SH05_RS12185 2455020 2456612 + PTS maltose- and glucose EIICB component phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%3B catalyzes the phosphorylation of maltose and glucose concomitant with their translocation across the cell membrane%3B component IIB catalyzes the phosphorylation of the sugar molecule%3B IIC forms the translocation channel and contains the substrate specific binding site gene gene2432 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12185 SH05_RS12190 SH05_12200 SH05_RS12190 2456622 2457794 + protein MalY catalyzes the formation of homocysteine and pyruvate from cystathionine%3B also acts a a negative regulator for the mal regulon but interacting with the transcriptional activator MalT gene gene2433 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12190 SH05_RS12195 SH05_12205 SH05_RS12195 2457898 2458899 + adenosine deaminase gene gene2434 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12195 SH05_RS12200 SH05_12210 SH05_RS12200 2458933 2459973 - oxidoreductase gene gene2435 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12200 SH05_RS12205 SH05_12215 SH05_RS12205 2460216 2460341 + divisome-associated membrane protein Blr gene gene2436 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12205 SH05_RS12210 SH05_12220 SH05_RS12210 2460614 2460829 + nucleoid-associated protein YdgT%3B in E. coli%2C when complexed with H-NS or StpA binds a 26 base-pair DNA sequence of oriC%3B seems to play a role in optimizing the activity of oriC%3B non-essential%3B Hha protein paralog%3B in an hha mutant background%2C cnu is overexpressed and can compensate hha-induced phenotypes gene gene2437 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12210 SH05_RS12215 SH05_12225 SH05_RS12215 2460915 2461355 + hypothetical protein gene gene2438 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12215 SH05_RS12220 SH05_12230 SH05_RS12220 2461432 2462013 + electron transport complex subunit RsxA gene gene2439 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12220 SH05_RS12225 SH05_12235 SH05_RS12225 2462013 2462591 + electron transport complex subunit RsxB part of membrane-bound complex thought to be involved in electron transport to nitrogen gene gene2440 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12225 SH05_RS12230 SH05_12240 SH05_RS12230 2462584 2464806 + electron transporter RsxC part of membrane-bound complex thought to be involved in electron transport to nitrogen gene gene2441 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12230 SH05_RS12235 SH05_12245 rnfD rnfD 2464807 2465865 + electron transport complex subunit RsxD RnfD%3B RsxD%3B required for nitrogen fixation in Rhodobacter capsulatus%3B part of a membrane-bound complex thought to be involved in electron transport to nitrogenase%3B in Escherichia coli this gene is part of a cluster controlling SoxR-mediated induction of the SoxS transcription factor in the absence of oxidizing agents gene gene2442 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12235 SH05_RS12240 SH05_12250 SH05_RS12240 2465869 2466489 + electron transport complex subunit RsxG part of membrane-bound complex hought to be involved in electron transport to nitrogen gene gene2443 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12240 SH05_RS12245 SH05_12255 SH05_RS12245 2466493 2467188 + electron transporter RsxE gene gene2444 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12245 SH05_RS12250 SH05_12260 SH05_RS12250 2467188 2467823 + endonuclease III DNA-(apurinic or apyrimidinic site) lyase%3B has apurinic or apyrimidinic endonuclease activity and DNA N-glycosylase activity%3B removed damaged DNA at cytosines%2C thymines and guanines gene gene2445 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12250 SH05_RS12255 SH05_12265 SH05_RS12255 2467951 2468151 + hypothetical protein gene gene2446 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12255 SH05_RS12260 SH05_12270 tppB tppB 2468434 2469936 + dipeptide and tripeptide permease A mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium%3B member of proton-dependent oligopeptide transport (POT) system family%3B in Escherichia coli this gene is regulated by OmpR although not via osmoregulation gene gene2447 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12260 SH05_RS12265 SH05_12275 SH05_RS12265 2470042 2470647 + glutathione S-transferase gene gene2448 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12265 SH05_RS12270 SH05_12280 SH05_RS12270 2470691 2471551 - pyridoxamine kinase catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal gene gene2449 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12270 SH05_RS12275 SH05_12285 SH05_RS12275 2471613 2472887 - tyrosine--tRNA ligase gene gene2450 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12275 SH05_RS12280 SH05_12290 SH05_RS12280 2473016 2473672 - pyridoxine/pyridoxamine 5'-phosphate oxidase catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate gene gene2451 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12280 SH05_RS12285 SH05_12295 SH05_RS12285 2473731 2474060 - lysozyme inhibitor MliC%3B membrane-bound lysozyme inhibitor of c-type lysozyme gene gene2452 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12285 SH05_RS12290 SH05_12300 anmK anmK 2474158 2475267 - anhydro-N-acetylmuramic acid kinase catalyzes hydrolysis of 1%2C6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate%3B involved in murein recycling gene gene2453 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12290 SH05_RS12295 SH05_12305 SH05_RS12295 2475541 2476008 + hypothetical protein gene gene2454 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12295 SH05_RS12300 SH05_12310 SH05_RS12300 2476055 2476489 - SlyA family transcriptional regulator Transcription regulator that can both activate or repress expression gene gene2455 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12300 SH05_RS12305 SH05_12315 SH05_RS12305 2476690 2476926 + membrane protein gene gene2456 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12305 SH05_RS12310 SH05_12320 SH05_RS12310 2476929 2477786 + membrane fusion protein (MFP) of YdhJK efflux pump gene gene2457 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12310 SH05_RS12315 SH05_12325 SH05_RS12315 2477786 2479798 + efflux protein (PET) component of YdhJK efflux pump gene gene2458 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12315 SH05_RS12320 SH05_12330 SH05_RS12320 2479799 2480320 - superoxide dismutase [Cu-Zn] SodC%3B copper and zinc binding%3B converts superoxide radicals to hydrogen peroxide and water gene gene2459 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12320 SH05_RS12325 SH05_12335 SH05_RS12325 2480401 2481297 - oxidoreductase gene gene2460 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12325 SH05_RS12330 SH05_12340 SH05_RS12330 2481346 2481585 - DUF1289 domain-containing protein gene gene2461 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12330 SH05_RS12335 SH05_12345 SH05_RS12335 2481688 2482287 + transcriptional regulator represses nemA which is involved in degradation of N-ethylmaleimide gene gene2462 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12335 SH05_RS12340 SH05_12350 SH05_RS12340 2482324 2483421 + N-ethylmaleimide reductase FMN-linked%3B catalyzes the formation of N-ethylsuccinimide from N-ethylmaleimide gene gene2463 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12340 SH05_RS12345 SH05_12355 SH05_RS12345 2483502 2483909 + lactoylglutathione lyase Ni-dependent%3B catalyzes the formation of S-lactoylglutathione from methylglyoxal and glutathione gene gene2464 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12345 SH05_RS12350 SH05_12360 SH05_RS12350 2484012 2484659 + ribonuclease T Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A) gene gene2465 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12350 SH05_RS12355 SH05_12365 SH05_RS12355 2484752 2489368 + ATP-dependent helicase similar to the DNA and RNA helicase superfamily II and eukaryotic DEAD family of helicases%3B longest known protein in E. coli gene gene2466 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12355 SH05_RS12360 SH05_12370 SH05_RS12360 2489419 2489766 - glutaredoxin gene gene2467 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12360 SH05_RS12365 SH05_12375 SH05_RS12365 2490100 2490915 + murein DD-endopeptidase MepH gene gene2468 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12365 SH05_RS12370 SH05_12380 SH05_RS12370 2491043 2491624 + superoxide dismutase [Fe] SodB%3B iron binding%3B present under aerobic and anaerobic conditions%3B destroys free radicals gene gene2469 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12370 SH05_RS12375 SH05_12385 SH05_RS12375 2491786 2492955 - transporter gene gene2470 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12375 SH05_RS12380 SH05_12390 SH05_RS12380 2493121 2493210 - stress response membrane gene gene2471 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12380 SH05_RS12385 SH05_12395 SH05_RS12385 2493509 2494534 + PurR family transcriptional regulator binds to the purF operator and coregulates other genes for de novo purine nucleotide synthesis%3B is involved in regulation of purB%2C purC%2C purEK%2C purHD%2C purL%2C purMN and guaBA expression%3B binds hypoxanthine and guanine as inducers gene gene2472 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12385 SH05_RS12390 SH05_12400 SH05_RS12390 2494531 2495463 - LysR family transcriptional regulator gene gene2473 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12390 SH05_RS12395 SH05_12405 SH05_RS12395 2495576 2496787 + Bcr/CflA family drug resistance efflux transporter uncharacterized member of the major facilitator superfamily (MFS) gene gene2474 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12395 SH05_RS12400 SH05_12410 SH05_RS12400 2497078 2498226 + cyclopropane-fatty-acyl-phospholipid synthase catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge gene gene2475 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12400 SH05_RS12405 SH05_12415 SH05_RS12405 2498266 2498907 - riboflavin synthase catalyzes the formation of riboflavin from 6%2C7-dimethyl-8-(1-D-ribityl)lumazine gene gene2476 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12405 SH05_RS12410 SH05_12420 SH05_RS12410 2499122 2500495 + multidrug resistance protein MdtK NorM%3B MdtK%3B functions as a Na(+)/drug antiporter%3B inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones gene gene2477 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12410 SH05_RS12415 SH05_12425 SH05_RS12415 2500536 2501792 - autotransporter adhesin-related protein gene gene2478 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12415 SH05_RS12420 SH05_12430 SH05_RS12420 2502100 2502176 + tRNA-Val tRNA gene2479 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12420 SH05_RS12425 SH05_12435 SH05_RS12425 2502181 2502257 + tRNA-Val tRNA gene2480 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12425 SH05_RS12430 SH05_12440 SH05_RS12430 2502365 2502670 + monooxygenase gene gene2481 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12430 SH05_RS12435 SH05_12445 SH05_RS12435 2502796 2504400 + oxidoreductase gene gene2482 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12435 SH05_RS12440 SH05_12450 SH05_RS12440 2504412 2505224 - FNR%2C Nar%2C NarP-regulated protein%3B subunit of YdhYVWXUT oxidoreductase complex gene gene2483 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12440 SH05_RS12445 SH05_12455 SH05_RS12445 2505228 2506013 - protein PhsC gene gene2484 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12445 SH05_RS12450 SH05_12460 SH05_RS12450 2506010 2506678 - 4Fe-4S ferredoxin gene gene2485 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12450 SH05_RS12455 SH05_12465 SH05_RS12455 2506742 2507380 - hypothetical protein gene gene2486 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12455 SH05_RS12460 SH05_12470 SH05_RS12460 2507393 2509495 - oxidoreductase subunit gene gene2487 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12460 SH05_RS12465 SH05_12475 SH05_RS12465 2509516 2510142 - 4Fe-4S ferredoxin gene gene2488 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12465 SH05_RS12470 SH05_12480 SH05_RS12470 2510597 2510806 - hypothetical protein gene gene2489 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12470 SH05_RS12475 SH05_12485 SH05_RS12475 2511363 2512775 + pyruvate kinase I catalyzes the formation of phosphoenolpyruvate from pyruvate gene gene2490 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12475 SH05_RS12480 SH05_12490 SH05_RS12480 2513086 2513322 + murein lipoprotein major outer membrane lipoprotein%3B interacts with peptidoglycan to maintain the integrity of the cell envelope gene gene2491 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12480 SH05_RS12485 SH05_12495 SH05_RS12485 2513386 2514390 - transpeptidase catalyzes the formation of a meso-diaminopimelyl-3-a meso-diaminopimelyl-3 cross-link in peptidoglycan synthesis gene gene2492 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12485 SH05_RS12490 SH05_12500 SH05_RS12490 2514539 2514955 - cysteine desulfuration protein SufE Acts with SufS to catalyze the formation of L-alanine from L-cysteine gene gene2493 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12490 SH05_RS12495 SH05_12505 SH05_RS12495 2514968 2516188 - cysteine desulfurase gene gene2494 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12495 SH05_RS12500 SH05_12510 SH05_RS12500 2516185 2517456 - Fe-S cluster assembly protein SufD with SufBC activates cysteine desulfurase SufS gene gene2495 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12500 SH05_RS12505 SH05_12515 sufC sufC 2517431 2518177 - Fe-S cluster assembly ATPase SufC part of SUF system involved in inserting iron-sulfur clusters into proteins%3B in Escherichia coli this protein forms a complex with SufBD%3B the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE gene gene2496 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12505 SH05_RS12510 SH05_12520 SH05_RS12510 2518187 2519674 - FeS cluster assembly protein SufB with SufCD activates cysteine desulfurase SufS gene gene2497 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12510 SH05_RS12515 SH05_12525 sufA sufA 2519683 2520051 - protein SufA functions as a scaffold on which iron-sulfur clusters ([2Fe-2S]%3B [4Fe-4S]) are assembled%3B forms a homodimer%3B similar to IscA protein gene gene2498 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12515 SH05_RS12520 SH05_12530 SH05_RS12520 2520599 2520787 - hypothetical protein gene gene2499 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12520 SH05_RS12525 SH05_12535 SH05_RS12525 2520887 2521297 - 1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase required for efficient enterobactin production gene gene2500 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12525 SH05_RS12530 SH05_12540 SH05_RS12530 2521294 2524350 - FAD-linked oxidoreductase gene gene2501 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12530 SH05_RS12535 SH05_12545 SH05_RS12535 2524739 2525851 + hypothetical protein YdiK%3B inner membrane protein%3B ydiK promoter presents a PurR sequence%2C suggesting that its expression is purine-regulated%3B unknown function gene gene2502 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12535 SH05_RS12540 SH05_12550 SH05_RS12540 2526280 2526636 + HTH domain DNA-binding protein gene gene2503 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12540 SH05_RS12545 SH05_12555 SH05_RS12545 2526736 2527950 + transporter gene gene2504 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12545 SH05_RS12550 SH05_12560 SH05_RS12550 2528177 2529442 + transporter gene gene2505 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12550 SH05_RS12555 SH05_12565 SH05_RS12555 2529454 2530320 + quinate/shikimate dehydrogenase YdiB%3B quinate/shikimate dehydrogenase from Escherichia coli uses both NAD and NAD(P) to convert quinate and shikimate to 3-dehydroquinate and 3-dehydroshikimate gene gene2506 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12555 SH05_RS12560 SH05_12570 SH05_RS12560 2530351 2531109 + 3-dehydroquinate dehydratase gene gene2507 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12560 SH05_RS12565 SH05_12575 SH05_RS12565 2531252 2532847 + acetate CoA-transferase YdiF gene gene2508 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12565 SH05_RS12570 SH05_12580 SH05_RS12570 2532861 2534012 + acyl-CoA dehydrogenase may play a role in electron transport between the anaerobic fatty acid oxidation pathway and the respiratory chain gene gene2509 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12570 SH05_RS12575 SH05_12585 SH05_RS12575 2534055 2534966 - transcriptional regulator gene gene2510 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12575 SH05_RS12580 SH05_12590 SH05_RS12580 2535069 2535245 - hypothetical protein gene gene2511 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12580 SH05_RS12585 SH05_12595 SH05_RS12585 2535282 2536046 + electron transfer flavoprotein subunit gene gene2512 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12585 SH05_RS12590 SH05_12600 fixB fixB 2536066 2537004 + electron transfer flavoprotein%2C FAD-binding subunit involved in electron transfer during carnitine metabolism gene gene2513 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12590 SH05_RS12595 SH05_12605 SH05_RS12595 2537060 2538349 + electron transfer flavoprotein-quinone oxidoreductase FAD/NAD(P)-binding domain%3B possibly part of an electron transfer system required for anaerobic carnitine reduction gene gene2514 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12595 SH05_RS12600 SH05_12610 SH05_RS12600 2538346 2538639 + ferredoxin-like protein YdiT gene gene2515 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12600 SH05_RS12605 SH05_12615 SH05_RS12605 2538696 2540342 + short-chain-fatty-acid--CoA ligase acts in anaerobic beta-oxidation of fatty acids%3B possible ligase/synthase involved in anaerobic growth on fatty acids gene gene2516 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12605 SH05_RS12610 SH05_12620 SH05_RS12610 2540399 2542777 - phosphoenolpyruvate synthase catalyzes the formation of phosphoenolpyruvate from pyruvate gene gene2517 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12610 SH05_RS12615 SH05_12625 SH05_RS12615 2542831 2542998 - hypothetical protein gene gene2518 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12615 SH05_RS12620 SH05_12630 SH05_RS12620 2543110 2543943 + phosphoenolpyruvate synthase regulatory protein gene gene2519 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12620 SH05_RS12625 SH05_12635 SH05_RS12625 2544100 2545146 + phospho-2-dehydro-3-deoxyheptonate aldolase Trp-sensitive gene gene2520 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12625 SH05_RS12630 SH05_12640 SH05_RS12630 2545278 2545469 + hemin uptake protein HemP homolog gene gene2521 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12630 SH05_RS12635 SH05_12645 SH05_RS12635 2545473 2546909 - hypothetical protein gene gene2522 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12635 SH05_RS12640 SH05_12650 SH05_RS12640 2546972 2547685 - anti-FlhD4C2 factor%2C inactive EAL family phosphodiesterase gene gene2523 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12640 SH05_RS12645 SH05_12655 SH05_RS12645 2547932 2548396 - endopeptidase gene gene2524 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12645 SH05_RS12650 SH05_RS12650 SH05_RS12650 2548474 2549222 - vitamin B12-transporter ATPase ATP-binding protein that acts with the transmembrane protein BtuC and the solute binding protein BtuF to transport vitamin B12 into the cell gene gene2525 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12650 SH05_RS12655 SH05_12665 btuE btuE 2549222 2549773 - vitamin B12 transport periplasmic protein BtuE similar to glutathione peroxidase%3B member of the btuCED operon which is required for vitamin B12 transport across the inner membrane gene gene2526 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12655 SH05_RS12660 SH05_12670 SH05_RS12660 2549836 2550816 - vitamin B12 import system permease BtuC with BtuD and BtuF transports vitamin B12 into the cell gene gene2527 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12660 SH05_RS12665 SH05_12675 ihfA ihfA 2550917 2551216 - integration host factor subunit alpha This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control gene gene2528 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12665 SH05_RS12670 SH05_12680 pheT pheT 2551221 2553608 - phenylalanine--tRNA ligase subunit beta catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a tetramer of alpha(2)beta(2)%3B binds two magnesium ions per tetramer%3B type 2 subfamily gene gene2529 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12670 SH05_RS12675 SH05_12685 SH05_RS12675 2553623 2554606 - phenylalanine--tRNA ligase subunit alpha gene gene2530 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12675 SH05_RS12680 SH05_12690 SH05_RS12680 2554720 2554815 - hypothetical protein gene gene2531 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12680 SH05_RS12685 SH05_12695 rplT rplT 2555057 2555413 - 50S ribosomal protein L20 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit gene gene2532 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12685 SH05_RS12690 SH05_12700 SH05_RS12690 2555466 2555663 - 50S ribosomal protein L35 gene gene2533 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12690 SH05_RS12695 SH05_12705 SH05_RS12695 2555760 2556302 - translation initiation factor IF-3 gene gene2534 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12695 SH05_RS12700 SH05_12710 thrS thrS 2556306 2558234 - threonine--tRNA ligase catalyzes a two-step reaction%2C first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr) gene gene2535 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12700 SH05_RS12705 SH05_RS12705 SH05_RS12705 2558758 2560657 + ankyrin gene gene2536 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12705 SH05_RS12710 SH05_12720 SH05_RS12710 2560829 2560936 + hypothetical protein gene gene2537 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12710 SH05_RS12715 SH05_12725 SH05_RS12715 2560989 2561747 - membrane protein gene gene2538 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12715 SH05_RS12720 SH05_12730 SH05_RS12720 2562034 2562963 + ATP-dependent 6-phosphofructokinase gene gene2539 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12720 SH05_RS12725 SH05_12735 SH05_RS12725 2563064 2563354 + hypothetical protein gene gene2540 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12725 SH05_RS12730 SH05_12740 SH05_RS12730 2563460 2564320 + fructosamine kinase gene gene2541 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12730 SH05_RS12735 SH05_12745 SH05_RS12735 2564361 2564897 - hypothetical protein gene gene2542 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12735 SH05_RS12740 SH05_12750 SH05_RS12740 2565044 2565712 + 2-deoxyglucose-6-phosphate phosphatase YniC%3B catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate%2C mannose 6-phosphate and p-nitrophenyl phosphate gene gene2543 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12740 SH05_RS12745 SH05_12755 SH05_RS12745 2565875 2566465 + hypothetical protein gene gene2544 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12745 SH05_RS12750 SH05_12760 SH05_RS12750 2566598 2567989 + transporter gene gene2545 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12750 SH05_RS12755 SH05_12765 SH05_RS12755 2567993 2568796 - hypothetical protein gene gene2546 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12755 SH05_RS12760 SH05_12770 SH05_RS12760 2569085 2569327 - cell division activator CedA gene gene2547 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12760 SH05_RS12765 SH05_12775 katE katE 2569531 2571792 + catalase HPII Catalase HPII%3B monofunctional catalase that decomposes hydrogen peroxide into water and oxygen%3B serves to protect cells from the toxic effects of hydrogen peroxide gene gene2548 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12765 SH05_RS12770 SH05_12780 SH05_RS12770 2572050 2572799 - chitooligosaccharide deacetylase ChbG gene gene2549 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12770 SH05_RS12775 SH05_12785 SH05_RS12775 2572812 2574164 - 6-phospho-beta-glucosidase catalyzes the fromation of N-acetyl-D-glucosamine and N-acetyl-D-glucosamine-6-phosphate from diacetylchitobiose-6-phosphate gene gene2550 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12775 SH05_RS12780 SH05_12790 SH05_RS12780 2574269 2575108 - transcriptional regulator represses the celABCDF-ydjC operon involved in carbon uptake gene gene2551 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12780 SH05_RS12785 SH05_12795 SH05_RS12785 2575119 2575469 - N%2CN'-diacetylchitobiose-specific phosphotransferase enzyme IIA component catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake gene gene2552 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12785 SH05_RS12790 SH05_12800 SH05_RS12790 2575520 2576878 - N%2CN'-diacetylchitobiose permease IIC component catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved in N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake gene gene2553 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12790 SH05_RS12795 SH05_12805 SH05_RS12795 2576963 2577283 - N%2CN'-diacetylchitobiose-specific phosphotransferase enzyme IIB component catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved in N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake gene gene2554 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12795 SH05_RS12800 SH05_12810 SH05_RS12800 2577582 2577920 - osmotically-inducible lipoprotein E osmotically-inducible lipoprotein E%3B activator of ntr-like gene protein gene gene2555 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12800 SH05_RS12805 SH05_12815 nadE nadE 2578122 2578949 + nH(3)-dependent NAD+ synthetase catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP%3B ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one%3B forms homodimers gene gene2556 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12805 SH05_RS12810 SH05_RS12810 SH05_RS12810 2578918 2579109 - hypothetical protein gene gene2557 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12810 SH05_RS12815 SH05_12825 SH05_RS12815 2579179 2580066 + excinuclease cho 3' incision activity%3B acts with UvrC gene gene2558 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12815 SH05_RS12820 SH05_12830 SH05_RS12820 2580026 2580601 - protein Ves gene gene2559 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12820 SH05_RS12825 SH05_12835 SH05_RS12825 2580804 2581289 - spheroplast protein Y periplasmic protein induced by stress response via Cpx and BaeSR system%3B similar to CpxP gene gene2560 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12825 SH05_RS12830 SH05_12840 SH05_RS12830 2581619 2582587 - succinylglutamate desuccinylase catalyzes the formation of succinate and glutamate from N(2)-succinylglutamate in arginine catabolism gene gene2561 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12830 SH05_RS12835 SH05_12845 SH05_RS12835 2582580 2583923 - N-succinylarginine dihydrolase catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine%2C ammonia and carbon dioxide in arginine degradation gene gene2562 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12835 SH05_RS12840 SH05_12850 astD astD 2583920 2585398 - N-succinylglutamate 5-semialdehyde dehydrogenase a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity%3B converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH gene gene2563 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12840 SH05_RS12845 SH05_12855 SH05_RS12845 2585395 2586429 - arginine N-succinyltransferase gene gene2564 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12845 SH05_RS12850 SH05_12860 SH05_RS12850 2586426 2587646 - succinylornithine aminotransferase catalyzes the transamination of 2-N-succinylornithine and alpha-ketoglutarate into 2-N-succinylglutamate semialdehyde and glutamate%3B also functions as the catabolic acetylornithine aminotransferase catalyzing the formation of 2-N-acetylglutamate semialdehyde and glutamate from 2-N-acetylornithine and alpha-ketoglutarate gene gene2565 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12850 SH05_RS12855 SH05_12865 SH05_RS12855 2588092 2588898 + exodeoxyribonuclease III gene gene2566 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12855 SH05_RS12860 SH05_12870 SH05_RS12860 2589065 2589775 + TVP38/TMEM64 family membrane protein YdjX gene gene2567 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12860 SH05_RS12865 SH05_12875 SH05_RS12865 2589780 2590457 + ferrodoxin-like lipoprotein gene gene2568 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12865 SH05_RS12870 SH05_12880 SH05_RS12870 2590472 2591179 + hypothetical protein gene gene2569 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12870 SH05_RS12875 SH05_12885 SH05_RS12875 2591179 2591727 + carboxymuconolactone decarboxylase gene gene2570 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12875 SH05_RS12880 SH05_12890 SH05_RS12880 2591737 2592903 + hypothetical protein gene gene2571 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12880 SH05_RS12885 SH05_12895 SH05_RS12885 2592876 2594411 + ABC transporter permease gene gene2572 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12885 SH05_RS12890 SH05_12900 SH05_RS12890 2594411 2595064 + ABC transporter ATPase gene gene2573 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12890 SH05_RS12895 SH05_12905 SH05_RS12895 2595131 2596438 + thiosulfate sulfurtransferase YnjE gene gene2574 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12895 SH05_RS12900 SH05_12910 SH05_RS12900 2596447 2597067 - hypothetical protein gene gene2575 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12900 SH05_RS12905 SH05_12915 SH05_RS12905 2597154 2597561 + CTP pyrophosphohydrolase gene gene2576 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12905 SH05_RS12910 SH05_12920 SH05_RS12910 2597527 2597799 - DUF1496 domain-containing protein gene gene2577 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12910 SH05_RS12915 SH05_12925 SH05_RS12915 2598035 2599378 + NADP-specific glutamate dehydrogenase converts 2-oxoglutarate to glutamate%3B in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction%3B uses NADPH%3B forms a homohexamer gene gene2578 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12915 SH05_RS12920 SH05_12930 SH05_RS12920 2599495 2600535 - hypothetical protein gene gene2579 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12920 SH05_RS12925 SH05_12935 SH05_RS12925 2600663 2602624 - DNA topoisomerase 3 decatenates replicating daughter chromosomes gene gene2580 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12925 SH05_RS12930 SH05_12940 SH05_RS12930 2602629 2603672 - selenophosphate synthase catalyzes the formation of selenophosphate from selenide and ATP gene gene2581 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12930 SH05_RS12935 SH05_12945 SH05_RS12935 2603614 2603763 - hypothetical protein gene gene2582 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12935 SH05_RS12940 SH05_12950 SH05_RS12940 2603789 2604340 - oxidoreductase gene gene2583 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12940 SH05_RS12945 SH05_12955 SH05_RS12945 2604394 2604558 + hypothetical protein gene gene2584 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12945 SH05_RS12950 SH05_12960 SH05_RS12950 2604501 2606357 + protease 4 SppA%3B catalyzes the degradation of cleaved signal peptides%3B essential to maintain secretion of mature proteins across the membrane gene gene2585 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12950 SH05_RS12955 SH05_12965 ansA ansA 2606524 2607540 + L-asparaginase 1 converts asparagine to aspartate and ammonia gene gene2586 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12955 SH05_RS12960 SH05_12970 SH05_RS12960 2607551 2608192 + pyrazinamidase/nicotinamidase catalyzes the formation of nicotinate from nicotinamide in NAD biosynthesis and the formation of pyrazinoate from pyrazinamide gene gene2587 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12960 SH05_RS12965 SH05_12975 SH05_RS12965 2608285 2609643 - metabolite transporter gene gene2588 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12965 SH05_RS12970 SH05_12980 SH05_RS12970 2609760 2610518 - DeoR family transcriptional regulator gene gene2589 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12970 SH05_RS12975 SH05_12985 SH05_RS12975 2610655 2611635 - oxidoreductase gene gene2590 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12975 SH05_RS12980 SH05_12990 SH05_RS12980 2611645 2612592 - kinase gene gene2591 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12980 SH05_RS12985 SH05_12995 SH05_RS12985 2612597 2613433 - hypothetical protein gene gene2592 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12985 SH05_RS12990 SH05_13000 SH05_RS12990 2613454 2614497 - Zn-dependent NAD(P)-binding oxidoreductase gene gene2593 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12990 SH05_RS12995 SH05_13005 SH05_RS12995 2614514 2615893 - MFS sugar transporter membrane protein gene gene2594 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS12995 SH05_RS13000 SH05_13010 SH05_RS13000 2615920 2616996 - Zn-dependent NAD(P)-binding oxidoreductase gene gene2595 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13000 SH05_RS13005 SH05_13015 SH05_RS13005 2617366 2617638 - DUF1315 domain-containing protein gene gene2596 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13005 SH05_RS13010 SH05_13020 SH05_RS13010 2617680 2618093 - peptide methionine sulfoxide reductase MsrB gene gene2597 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13010 SH05_RS13015 SH05_13025 SH05_RS13015 2618435 2619430 + glyceraldehyde-3-phosphate dehydrogenase gene gene2598 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13015 SH05_RS13020 SH05_13030 SH05_RS13020 2619514 2620398 + D-hexose-6-phosphate epimerase-like protein gene gene2599 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13020 SH05_RS13025 SH05_13035 SH05_RS13025 2620446 2621300 - aldo-keto reductase gene gene2600 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13025 SH05_RS13030 SH05_13040 SH05_RS13030 2621390 2622136 - MltA-interacting protein scaffolding protein for the murein polymerase MrcB and the lytic transglycosylase MltA gene gene2601 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13030 SH05_RS13035 SH05_13045 SH05_RS13035 2622572 2624506 + protein kinase endogenous substrate unidentified%3B autokinase gene gene2602 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13035 SH05_RS13040 SH05_13050 SH05_RS13040 2624619 2625902 + hypothetical protein gene gene2603 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13040 SH05_RS13045 SH05_13055 SH05_RS13045 2626190 2627524 + membrane protein gene gene2604 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13045 SH05_RS13050 SH05_13060 SH05_RS13050 2627705 2629195 + diguanylate cyclase gene gene2605 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13050 SH05_RS13055 SH05_13065 SH05_RS13055 2629238 2629741 + aminoacyl-tRNA editing domain protein gene gene2606 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13055 SH05_RS13060 SH05_13070 SH05_RS13060 2629742 2629894 - hypothetical protein gene gene2607 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13060 SH05_RS13065 SH05_13075 SH05_RS13065 2630016 2630462 + membrane protein gene gene2608 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13065 SH05_RS13070 SH05_13080 SH05_RS13070 2630419 2631240 - transcriptional regulator gene gene2609 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13070 SH05_RS13075 SH05_13085 SH05_RS13075 2631337 2632518 + transporter gene gene2610 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13075 SH05_RS13080 SH05_13090 SH05_RS13080 2632573 2632920 + DUF488 domain-containing protein gene gene2611 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13080 SH05_RS13085 SH05_13095 SH05_RS13085 2632942 2633196 - DUF333 domain-containing protein gene gene2612 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13085 SH05_RS13090 SH05_13100 SH05_RS13090 2633379 2634404 + diguanylate cyclase gene gene2613 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13090 SH05_RS13095 SH05_13105 SH05_RS13095 2634437 2634535 + hypothetical protein gene gene2614 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13095 SH05_RS13100 SH05_13110 SH05_RS13100 2634671 2634919 - membrane protein gene gene2615 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13100 SH05_RS13105 SH05_13115 SH05_RS13105 2635068 2635250 - hypothetical protein gene gene2616 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13105 SH05_RS13110 SH05_13120 SH05_RS13110 2635254 2635613 - hypothetical protein gene gene2617 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13110 SH05_RS13115 SH05_13125 SH05_RS13115 2635786 2636424 - leucine efflux protein gene gene2618 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13115 SH05_RS13120 SH05_13130 SH05_RS13120 2636551 2637474 - transcriptional regulator gene gene2619 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13120 SH05_RS13125 SH05_13135 SH05_RS13125 2637577 2638662 + malate dehydrogenase gene gene2620 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13125 SH05_RS13130 SH05_13140 SH05_RS13130 2638868 2640298 + betaine/carnitine/choline BCCT transporter member of the betaine%2C carnitine%2C choline transporter (BCCT) family%3B unknown function gene gene2621 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13130 SH05_RS13135 SH05_13145 SH05_RS13135 2640330 2641454 + ring hydroxylating dioxygenase subunit alpha gene gene2622 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13135 SH05_RS13140 SH05_13150 SH05_RS13140 2641510 2642475 + YeaWX dioxygenase subunit beta%2C reductase component gene gene2623 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13140 SH05_RS13145 SH05_13155 SH05_RS13145 2642529 2643644 - ribonuclease D gene gene2624 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13145 SH05_RS13150 SH05_13160 SH05_RS13150 2643726 2645444 - long-chain fatty acid--CoA ligase Activates fatty acids by binding to coenzyme A gene gene2625 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13150 SH05_RS13155 SH05_13165 SH05_RS13155 2645616 2646197 - Slp family lipoprotein%2C RpoE-regulated gene gene2626 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13155 SH05_RS13160 SH05_13170 SH05_RS13160 2646237 2646932 - tRNA threonylcarbamoyladenosine biosynthesis protein TsaB gene gene2627 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13160 SH05_RS13165 SH05_13175 SH05_RS13165 2646990 2648900 - ATP-dependent helicase gene gene2628 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13165 SH05_RS13170 SH05_13180 SH05_RS13170 2649032 2649376 + hypothetical protein gene gene2629 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13170 SH05_RS13175 SH05_13185 SH05_RS13175 2649798 2650097 + DUF1889 domain-containing protein gene gene2630 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13175 SH05_RS13180 SH05_13190 SH05_RS13180 2650217 2650396 - hypothetical protein gene gene2631 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13180 SH05_RS13185 SH05_13195 pabB pabB 2650470 2651831 + aminodeoxychorismate synthase component I para-aminobenzoate synthase component 1%3B catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and L-glutamine gene gene2632 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13185 SH05_RS13190 SH05_13200 SH05_RS13190 2651835 2652413 + CoA pyrophosphohydrolase weak 3-phosphohydroxypyruvate phosphatase gene gene2633 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13190 SH05_RS13195 SH05_13205 SH05_RS13195 2652597 2653961 + L-serine dehydratase 1 catalyzes the formation of pyruvate from serine gene gene2634 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13195 SH05_RS13200 SH05_13210 SH05_RS13200 2654092 2655690 + cyclic-di-GMP phosphodiesterase gene gene2635 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13200 SH05_RS13205 SH05_13215 SH05_RS13205 2655694 2657250 - hypothetical protein gene gene2636 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13205 SH05_RS13210 SH05_13220 SH05_RS13210 2657238 2657447 - hypothetical protein gene gene2637 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13210 SH05_RS13215 SH05_13225 SH05_RS13215 2657713 2658684 + PTS mannose EIIAB component catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIA transfers a phosphoryl group to subunit IIB%3B subunit IIB transfers the phosphoryl group to the substrate gene gene2638 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13215 SH05_RS13220 SH05_13230 SH05_RS13220 2658747 2659547 + mannose permease IIC component catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site gene gene2639 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13220 SH05_RS13225 SH05_13235 SH05_RS13225 2659560 2660411 + mannose permease IID component hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IID with IIC forms the translocation channel gene gene2640 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13225 SH05_RS13230 SH05_13240 SH05_RS13230 2660466 2660924 + hypothetical protein gene gene2641 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13230 SH05_RS13235 SH05_13245 SH05_RS13235 2661111 2661356 + hypothetical protein gene gene2642 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13235 SH05_RS13240 SH05_13250 SH05_RS13240 2661353 2661919 + manganese efflux pump MntP membrane protein YebN gene gene2643 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13240 SH05_RS13245 SH05_13255 rrmA rrmA 2661916 2662725 - 23S rRNA (guanine(745)-N(1))-methyltransferase methylates the guanosine in position 745 of 23S rRNA%3B required for translation and cell growth gene gene2644 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13245 SH05_RS13250 SH05_13260 SH05_RS13250 2662891 2663100 - cold-shock protein CspC gene gene2645 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13250 SH05_RS13255 SH05_13265 SH05_RS13255 2663113 2663256 - DUF2527 domain-containing protein gene gene2646 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13255 SH05_RS13260 SH05_13270 SH05_RS13260 2663218 2663424 + hypothetical protein gene gene2647 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13260 SH05_RS13265 SH05_13275 SH05_RS13265 2663926 2664213 - hypothetical protein gene gene2648 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13265 SH05_RS13270 SH05_13280 SH05_RS13270 2664288 2664431 - PhoP family transcriptional regulator gene gene2649 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13270 SH05_RS13275 SH05_13285 SH05_RS13275 2664590 2664829 + hypothetical protein gene gene2650 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13275 SH05_RS13280 SH05_13290 SH05_RS13280 2664973 2665764 - transcriptional regulator KdgR regulates the genes involved in 2-keto-3-deoxy gluconate transport and catabolism gene gene2651 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13280 SH05_RS13285 SH05_13295 SH05_RS13285 2665941 2667314 + transporter gene gene2652 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13285 SH05_RS13290 SH05_RS13290 SH05_RS13290 2667360 2668241 - heat-shock protein HtpX metalloprotease gene gene2653 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13290 SH05_RS13295 SH05_13305 SH05_RS13295 2668433 2670481 - tail-specific protease Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3 gene gene2654 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13295 SH05_RS13300 SH05_13310 SH05_RS13300 2670501 2671199 - RNA chaperone ProQ affects solute and DNA transport through an unknown mechanism gene gene2655 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13300 SH05_RS13305 SH05_13315 SH05_RS13305 2671296 2671793 - methionine-R-sulfoxide reductase gene gene2656 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13305 SH05_RS13310 SH05_13320 SH05_RS13310 2671923 2673206 + hypothetical protein gene gene2657 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13310 SH05_RS13315 SH05_13325 SH05_RS13315 2673175 2675808 + MCE domain protein gene gene2658 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13315 SH05_RS13320 SH05_RS13320 yebU yebU 2675888 2677327 + RNA methyltransferase RsmF in Escherichia coli this enzyme specifically methylates C1407 of the 16S rRNA gene gene2659 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13320 SH05_RS13325 SH05_13335 SH05_RS13325 2677445 2677681 + hypothetical protein gene gene2660 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13325 SH05_RS13330 SH05_13340 SH05_RS13330 2677786 2677977 + hypothetical protein gene gene2661 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13330 SH05_RS13335 SH05_13345 SH05_RS13335 2677978 2678634 - serine/threonine-protein phosphatase 1 gene gene2662 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13335 SH05_RS13340 SH05_13350 SH05_RS13340 2678859 2678945 - hypothetical protein gene gene2663 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13340 SH05_RS13345 SH05_13355 SH05_RS13345 2679030 2679368 - hypothetical protein gene gene2664 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13345 SH05_RS13350 SH05_13360 SH05_RS13350 2679384 2680256 - hypothetical protein gene gene2665 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13350 SH05_RS13355 SH05_13365 SH05_RS13355 2680260 2680634 - hypothetical protein gene gene2666 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13355 SH05_RS13360 SH05_13370 SH05_RS13360 2680773 2681003 + DNA polymerase III subunit theta gene gene2667 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13360 SH05_RS13365 SH05_13375 SH05_RS13365 2681105 2681761 + hypothetical protein gene gene2668 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13365 SH05_RS13370 SH05_13380 SH05_RS13370 2681785 2682447 + exodeoxyribonuclease 10 3'-5' exonuclease activity on single or double-strand DNA gene gene2669 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13370 SH05_RS13375 SH05_13385 SH05_RS13375 2682444 2684504 - protease 2 PtrB%3B oligopeptidase that cleaves peptide bonds following arginine and lysine residues gene gene2670 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13375 SH05_RS13380 SH05_13390 SH05_RS13380 2684713 2685372 - hypothetical protein gene gene2671 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13380 SH05_RS13385 SH05_13395 SH05_RS13385 2685432 2685542 + hypothetical protein gene gene2672 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13385 SH05_RS13390 SH05_13400 SH05_RS13390 2685699 2686055 - hypothetical protein secreted protein%3B unknown function gene gene2673 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13390 SH05_RS13395 SH05_13405 SH05_RS13395 2686122 2686412 - DNA damage-inducible protein gene gene2674 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13395 SH05_RS13400 SH05_13410 SH05_RS13400 2686546 2687724 + phosphoribosylglycinamide formyltransferase 2 gene gene2675 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13400 SH05_RS13405 SH05_13415 SH05_RS13405 2687780 2688421 - KHG/KDPG aldolase catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate%3B or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate gene gene2676 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13405 SH05_RS13410 SH05_13420 SH05_RS13410 2688458 2690269 - phosphogluconate dehydratase catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate gene gene2677 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13410 SH05_RS13415 SH05_13425 SH05_RS13415 2690504 2691979 - glucose-6-phosphate 1-dehydrogenase catalyzes the formation of D-glucono-1%2C5-lactone 6-phosphate from D-glucose 6-phosphate gene gene2678 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13415 SH05_RS13420 SH05_13430 SH05_RS13420 2692145 2692294 - hypothetical protein gene gene2679 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13420 SH05_RS13425 SH05_13435 SH05_RS13425 2692317 2693186 + transcriptional regulator Represses the expression of the zwf%2C eda%2C glp and gap gene gene2680 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13425 SH05_RS13430 SH05_13440 SH05_RS13430 2693314 2694756 + pyruvate kinase II catalyzes the formation of phosphoenolpyruvate from pyruvate gene gene2681 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13430 SH05_RS13435 SH05_13445 SH05_RS13435 2694887 2695858 - lipid A biosynthesis myristoyltransferase Transfers myristate or laurate%2C activated on ACP%2C to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA gene gene2682 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13435 SH05_RS13440 SH05_13450 SH05_RS13440 2695978 2697300 - murein DD-endopeptidase MepM gene gene2683 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13440 SH05_RS13445 SH05_13455 znuA znuA 2697316 2698248 - zinc uptake system protein ZnuA involved in transport of zinc(II) with ZnuA and C gene gene2684 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13445 SH05_RS13450 SH05_13460 znuC znuC 2698327 2699082 + Mn2+/Zn2+ABC transporter ATP-binding protein involved in transport of zinc(II) with ZnuA and C gene gene2685 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13450 SH05_RS13455 SH05_13465 znuB znuB 2699079 2699864 + zinc uptake system membrane protein ZnuB involved in transport of zinc(II) with ZnuA and C gene gene2686 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13455 SH05_RS13460 SH05_13470 SH05_RS13460 2700011 2701021 - Holliday junction DNA helicase RuvB gene gene2687 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13460 SH05_RS13465 SH05_13475 ruvA ruvA 2701030 2701641 - Holliday junction DNA helicase RuvA plays an essential role in ATP-dependent branch migration of the Holliday junction gene gene2688 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13465 SH05_RS13470 SH05_13480 SH05_RS13470 2701916 2702518 + DUF830 domain-containing protein gene gene2689 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13470 SH05_RS13475 SH05_13485 ruvC ruvC 2702520 2703041 - crossover junction endodeoxyribonuclease RuvC endonuclease%3B resolves Holliday structures%3B forms a complex of RuvABC%3B the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration%3B RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity gene gene2690 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13475 SH05_RS13480 SH05_13490 SH05_RS13480 2703076 2703816 - transcriptional regulator gene gene2691 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13480 SH05_RS13485 SH05_13495 nudB nudB 2703845 2704327 - dihydroneopterin triphosphate pyrophosphatase catalyzes the formation of dihydroneopterin phosphate from dihydroneopterin triphosphate gene gene2692 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13485 SH05_RS13490 SH05_13500 SH05_RS13490 2704415 2706187 - aspartate--tRNA ligase gene gene2693 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13490 SH05_RS13495 SH05_13505 SH05_RS13495 2706497 2707063 + isochorismatase gene gene2694 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13495 SH05_RS13500 SH05_13510 SH05_RS13500 2707060 2707878 + hypothetical protein gene gene2695 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13500 SH05_RS13505 SH05_13515 SH05_RS13505 2707931 2708326 + hypothetical protein gene gene2696 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13505 SH05_RS13510 SH05_13520 SH05_RS13510 2708367 2709110 + tRNA (cmo5U34)-methyltransferase catalyzes the conversion of 5-methoxyuridine to uridine-5-oxyacetic acid in tRNA gene gene2697 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13510 SH05_RS13515 SH05_13525 SH05_RS13515 2709107 2710078 + tRNA (mo5U34)-methyltransferase catalyzes the conversion of 5-hydroxyuridine to 5-methoxyuridine in tRNA gene gene2698 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13515 SH05_RS13520 SH05_13530 SH05_RS13520 2710243 2712672 - Trimethylamine-N-oxide reductase 2 catalyzes the reduction of trimethylamine-N-oxide to form trimethylamine gene gene2699 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13520 SH05_RS13525 SH05_13535 SH05_RS13525 2712697 2713797 - cytochrome c-type protein TorY gene gene2700 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13525 SH05_RS13530 SH05_13540 SH05_RS13530 2714185 2714931 - copper homeostasis protein CutC gene gene2701 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13530 SH05_RS13535 SH05_13545 SH05_RS13535 2714945 2715511 - hypothetical protein gene gene2702 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13535 SH05_RS13540 SH05_13550 SH05_RS13540 2715727 2717460 + arginine--tRNA ligase gene gene2703 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13540 SH05_RS13545 SH05_13555 SH05_RS13545 2717637 2718125 + hypothetical protein gene gene2704 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13545 SH05_RS13550 SH05_13560 SH05_RS13550 2718245 2718637 - flagellar biosynthesis protein FlhE gene gene2705 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13550 SH05_RS13555 SH05_13565 SH05_RS13555 2718637 2720715 - flagellar biosynthesis protein FlhA gene gene2706 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13555 SH05_RS13560 SH05_13570 flhB flhB 2720708 2721856 - flagellar biosynthetic protein FlhB membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export gene gene2707 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13560 SH05_RS13565 SH05_13575 SH05_RS13565 2722058 2722702 - protein phosphatase CheZ cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation gene gene2708 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13565 SH05_RS13570 SH05_13580 SH05_RS13570 2722713 2723102 - chemotaxis protein CheY chemotaxis regulator that%2C when phosphorylated%2C interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble gene gene2709 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13570 SH05_RS13575 SH05_13585 SH05_RS13575 2723117 2724166 - two-component system protein-glutamate methylesterase response regulator regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins gene gene2710 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13575 SH05_RS13580 SH05_13590 SH05_RS13580 2724169 2725029 - chemotaxis protein methyltransferase methylates the MCP gene gene2711 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13580 SH05_RS13585 SH05_13595 SH05_RS13585 2725048 2726649 - methyl-accepting chemotaxis protein IV mediates taxis toward dipeptides gene gene2712 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13585 SH05_RS13590 SH05_13600 SH05_RS13590 2726695 2728356 - methyl-accepting chemotaxis protein II serine sensor receptor gene gene2713 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13590 SH05_RS13595 SH05_13605 SH05_RS13595 2728501 2729004 - chemotaxis protein CheW gene gene2714 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13595 SH05_RS13600 SH05_13610 SH05_RS13600 2729025 2730983 - chemotaxis protein CheA gene gene2715 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13600 SH05_RS13605 SH05_13615 motB motB 2730994 2731920 - motility protein B with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine gene gene2716 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13605 SH05_RS13610 SH05_13620 SH05_RS13610 2731917 2732804 - motility protein A With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine gene gene2717 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13610 SH05_RS13615 SH05_13625 SH05_RS13615 2732931 2733509 - flagellar transcriptional regulator FlhC With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems gene gene2718 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13615 SH05_RS13620 SH05_13630 SH05_RS13620 2733512 2733862 - flagellar transcriptional regulator FlhD with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems gene gene2719 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13620 SH05_RS13625 SH05_13635 SH05_RS13625 2734642 2735070 + universal stress protein C ppGpp-dependent%3B membrane-associated%2C stress protein produced under conditions of nutrient deprivation%2C osmotic shock and oxidative stress gene gene2720 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13625 SH05_RS13630 SH05_13640 SH05_RS13630 2735077 2736501 - alpha%2Calpha-trehalose-phosphate synthase [UDP-forming] gene gene2721 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13630 SH05_RS13635 SH05_13645 SH05_RS13635 2736476 2737276 - trehalose-6-phosphate phosphatase biosynthetic%3B catalyzes the formation of trehalose and phosphate from trehalose-6-phosphate%3B expression is increased under osmotic stress and induced during the transition to stationary phase and by decreased temperature gene gene2722 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13635 SH05_RS13640 SH05_13650 araH araH 2737443 2738429 - arabinose ABC transporter permease Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose gene gene2723 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13640 SH05_RS13645 SH05_13655 araG araG 2738444 2739958 - arabinose import ATP-binding protein AraG Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose gene gene2724 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13645 SH05_RS13650 SH05_13660 SH05_RS13650 2740028 2741017 - L-arabinose-binding periplasmic protein with AraGH is involved in the transport of arabinose into the cell gene gene2725 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13650 SH05_RS13655 SH05_13665 SH05_RS13655 2741814 2742317 + ferritin ferritin B%3B required for virulence in Salmonella%3B may be involved in repair of damaged Fe-S clusters gene gene2726 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13655 SH05_RS13660 SH05_13670 SH05_RS13660 2742396 2742647 - hypothetical protein gene gene2727 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13660 SH05_RS13665 SH05_13675 SH05_RS13665 2742759 2742905 + hypothetical protein gene gene2728 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13665 SH05_RS13670 SH05_13680 SH05_RS13670 2743111 2743434 + lipoprotein%2C function unknown gene gene2729 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13670 SH05_RS13675 SH05_13685 SH05_RS13675 2743605 2744102 + non-heme ferritin cytoplasmic iron storage protein gene gene2730 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13675 SH05_RS13680 SH05_13690 SH05_RS13680 2744140 2744379 - DUF2492 domain-containing protein gene gene2731 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13680 SH05_RS13685 SH05_13695 SH05_RS13685 2744570 2745781 + tyrosine-specific transporter tyrosine specific permease gene gene2732 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13685 SH05_RS13690 SH05_13700 SH05_RS13690 2745843 2746508 - hypothetical protein gene gene2733 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13690 SH05_RS13695 SH05_13705 SH05_RS13695 2746704 2746790 - tRNA-Leu tRNA gene2734 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13695 SH05_RS13700 SH05_13710 SH05_RS13700 2746803 2746876 - tRNA-Cys tRNA gene2735 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13700 SH05_RS13705 SH05_13715 SH05_RS13705 2746931 2747006 - tRNA-Gly tRNA gene2736 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13705 SH05_RS13710 SH05_13720 SH05_RS13710 2747158 2747706 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase gene gene2737 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13710 SH05_RS13715 SH05_13725 uvrC uvrC 2747763 2749595 - UvrABC system protein C The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision gene gene2738 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13715 SH05_RS13720 SH05_13730 sirA sirA 2749592 2750248 - transcriptional regulator in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system%3B in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system gene gene2739 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13720 SH05_RS13725 SH05_13735 SH05_RS13725 2750544 2750720 + 2-oxo acid dehydrogenase gene gene2740 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13725 SH05_RS13730 SH05_13740 SH05_RS13730 2750707 2750931 + hypothetical protein gene gene2741 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13730 SH05_RS13735 SH05_13745 SH05_RS13735 2750999 2751721 - regulatory protein SdiA regulates genes involved in cell division gene gene2742 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13735 SH05_RS13740 SH05_13750 SH05_RS13740 2751951 2752703 - ABC transporter ATPase gene gene2743 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13740 SH05_RS13745 SH05_13755 SH05_RS13745 2752700 2753368 - amino acid ABC transporter permease gene gene2744 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13745 SH05_RS13750 SH05_13760 SH05_RS13750 2753383 2754369 - D-cysteine desulfhydrase catalyzes the formation of pyruvate from D-cysteine gene gene2745 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13750 SH05_RS13755 SH05_13765 SH05_RS13755 2754474 2755274 - cystine-binding periplasmic protein gene gene2746 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13755 SH05_RS13760 SH05_13770 SH05_RS13760 2755362 2755913 - regulator of sigma S factor FliZ expression activator of the class 2 type of flagellar operons%2C essential to achieve maximal cell motility%3B activator of type 1 fimbrial gene expression%3B cell density-responsive regulator%3B FliZ in Salmonella typhimurium induces HilA%2C an activator of invasion genes necessary to achieve full virulence gene gene2747 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13760 SH05_RS13765 SH05_13775 fliA fliA 2755959 2756678 - RNA polymerase sigma factor FliA sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor directs late flagellar biosynthesis genes gene gene2748 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13765 SH05_RS13770 SH05_13780 SH05_RS13770 2756999 2758495 - flagellin structural flagella protein%3B individual Salmonella serotypes usually alternate between the production of 2 antigenic forms of flagella%2C termed phase 1 and phase 2%2C each specified by separate structural genes gene gene2749 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13770 SH05_RS13775 SH05_13785 fliD fliD 2758761 2760167 + flagellar hook-associated protein 2 involved in flagellin assembly gene gene2750 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13775 SH05_RS13780 SH05_13790 fliS fliS 2760192 2760602 + flagellar protein FliS flagellin specific chaperone gene gene2751 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13780 SH05_RS13785 SH05_13795 SH05_RS13785 2760602 2760967 + flagellar protein FliT binds flagellar cap subunits (FliD) and seems to prevents their oligomerization prior to its translocation through the flagellum-specific type III export pathway%3B acts as a repressor of flagellar class 2 operons by preventing FlhD2C2 to bind the promoter and inhibiting the FlhD2C2-dependent transcription%3B member of the type III cytoplasmic chaperone family gene gene2752 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13785 SH05_RS13790 SH05_13800 SH05_RS13790 2761045 2762532 + alpha-amylase converts 1%2C4-alpha-D-glucans to maltodextrin gene gene2753 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13790 SH05_RS13795 SH05_13805 SH05_RS13795 2762566 2762979 - lipoprotein gene gene2754 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13795 SH05_RS13800 SH05_13810 SH05_RS13800 2763166 2764371 + UPF0394 family sulfur transport domain-containing inner membrane protein gene gene2755 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13800 SH05_RS13805 SH05_13815 SH05_RS13805 2764368 2764601 + TusA family sulfurtransferase gene gene2756 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13805 SH05_RS13810 SH05_13820 SH05_RS13810 2764710 2765378 + DUF159 domain-containing protein gene gene2757 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13810 SH05_RS13815 SH05_13825 SH05_RS13815 2765489 2765968 + GNAT family acetyltransferase gene gene2758 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13815 SH05_RS13820 SH05_RS13820 SH05_RS13820 2766112 2766341 - non-LEE-encoded type III secreted effector domain protein gene gene2759 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13820 SH05_RS13825 SH05_RS13825 SH05_RS13825 2766438 2767240 - hypothetical protein gene gene2760 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13825 SH05_RS13830 SH05_13840 SH05_RS13830 2767391 2767669 + hypothetical protein gene gene2761 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13830 SH05_RS13835 SH05_13845 fliE fliE 2767589 2767903 - flagellar hook-basal body complex protein FliE forms a junction between the M-ring and FlgB during flagella biosynthesis gene gene2762 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13835 SH05_RS13840 SH05_13850 fliF fliF 2768118 2769776 + flagellar M-ring protein the MS-ring anchors the flagellum to the cytoplasmic membrane%3B part of the flagellar basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod gene gene2763 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13840 SH05_RS13845 SH05_13855 fliG fliG 2769769 2770764 + flagellar motor switch protein FliG One of three proteins involved in switching the direction of the flagellar rotation gene gene2764 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13845 SH05_RS13850 SH05_13860 fliH fliH 2770757 2771443 + flagellar assembly protein FliH binds to and inhibits the function of flagella specific ATPase FliI gene gene2765 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13850 SH05_RS13855 SH05_13865 fliI fliI 2771443 2772816 + flagellum-specific ATP synthase involved in type III protein export during flagellum assembly gene gene2766 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13855 SH05_RS13860 SH05_13870 fliJ fliJ 2772835 2773278 + flagellar FliJ protein rod/hook and filament chaperone gene gene2767 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13860 SH05_RS13865 SH05_13875 SH05_RS13865 2773275 2774402 + flagellar hook-length control protein gene gene2768 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13865 SH05_RS13870 SH05_13880 fliL fliL 2774507 2774971 + flagellar protein FliL interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring gene gene2769 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13870 SH05_RS13875 SH05_13885 fliM fliM 2774976 2775980 + flagellar motor switch protein FliM with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation gene gene2770 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13875 SH05_RS13880 SH05_13890 fliN fliN 2775977 2776390 + flagellar motor switch protein FliN One of three proteins involved in switching the direction of the flagellar rotation gene gene2771 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13880 SH05_RS13885 SH05_13895 SH05_RS13885 2776393 2776758 + flagellar protein FliO with FlhA%2C FlhB%2C FliP%2C FliQ and FliR is one of the membrane components of the flagellar export apparatus gene gene2772 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13885 SH05_RS13890 SH05_13900 fliP fliP 2776758 2777495 + flagellar biosynthetic protein FliP FliP%2C with proteins FliQ and FliR%2C forms the core of the central channel in the flagella export apparatus gene gene2773 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13890 SH05_RS13895 SH05_13905 fliQ fliQ 2777505 2777774 + flagellar biosynthetic protein FliQ with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus gene gene2774 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13895 SH05_RS13900 SH05_13910 fliR fliR 2777782 2778567 + flagellar biosynthesis protein FliR FliR%2C with proteins FliP and FliQ%2C forms the core of the central channel in the flagella export apparatus gene gene2775 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13900 SH05_RS13905 SH05_13915 rcsA rcsA 2778857 2779480 + transcriptional regulator with RcsB is a positive regulator of capsular polysaccharide synthesis genes gene gene2776 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13905 SH05_RS13910 SH05_13920 SH05_RS13910 2779524 2779712 - protein DsrB gene gene2777 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13910 SH05_RS13915 SH05_13925 SH05_RS13915 2779875 2780102 + hypothetical protein gene gene2778 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13915 SH05_RS13920 SH05_13930 SH05_RS13920 2780400 2781215 + mannosyl-3-phosphoglycerate phosphatase catalyzes the hydrolysis of mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate gene gene2779 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13920 SH05_RS13925 SH05_13935 SH05_RS13925 2781212 2782888 - diguanylate cyclase catalyzes the formation of cyclic di-3'%2C5'-guanylate from guanosine triphosphate%3B involved in the regulation of cellulose biosynthesis gene gene2780 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13925 SH05_RS13930 SH05_13940 SH05_RS13930 2783077 2783259 - hypothetical protein gene gene2781 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13930 SH05_RS13935 SH05_13945 SH05_RS13935 2783338 2784255 - hypothetical protein gene gene2782 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13935 SH05_RS13940 SH05_13950 SH05_RS13940 2784428 2785348 + amino acid exporter for phenylalanine%2C threonine gene gene2783 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13940 SH05_RS13945 SH05_13955 SH05_RS13945 2785337 2785807 - very short patch repair protein DNA mismatch endonuclease%3B recognizes and repairs T:G mismatches gene gene2784 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13945 SH05_RS13950 SH05_13960 SH05_RS13950 2785788 2787206 - DNA-cytosine methyltransferase gene gene2785 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13950 SH05_RS13955 SH05_13965 SH05_RS13955 2787273 2787968 - hydrolase gene gene2786 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13955 SH05_RS13960 SH05_13970 SH05_RS13960 2788008 2788310 - permease gene gene2787 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13960 SH05_RS13970 SH05_RS13970 SH05_RS13970 2788940 2790132 + porin allows for ions and hydrophilic solutes to cross the outer membrane gene gene2788 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13970 SH05_RS13975 SH05_13985 SH05_RS13975 2790133 2790336 - hypothetical protein gene gene2789 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13975 SH05_RS13980 SH05_13990 SH05_RS13980 2790724 2791575 + Molecular chaperone Hsp31 and glyoxalase 3 Hsp31 stabilizes early unfolding protein intermediates under severe heat stress gene gene2790 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13980 SH05_RS13985 SH05_13995 SH05_RS13985 2791683 2793041 - two-component system sensor histidine kinase gene gene2791 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13985 SH05_RS13990 SH05_14000 SH05_RS13990 2793041 2793712 - two-component system response regulator induced by CusR in the presence of copper%3B YedW induces the expression of the upstream gene yedV (encoding a sensor kinase) as well as yedW%3B yedVW is one of four copper regulons found in E. coli%3B part of the copper homeostasis mechanism%3B confers resistance to copper and several drugs when induced gene gene2792 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13990 SH05_RS13995 SH05_14005 SH05_RS13995 2793845 2794258 + 5-hydroxyisourate hydrolase catalyzes the formation of 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline from 5-hydroxyisourate gene gene2793 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS13995 SH05_RS14000 SH05_14010 SH05_RS14000 2794367 2795371 + sulfoxide reductase catalytic subunit YedY in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase%3B requires inner membrane anchor protein YedZ gene gene2794 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14000 SH05_RS14005 SH05_14015 SH05_RS14005 2795372 2796007 + sulfoxide reductase heme-binding subunit YedZ in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY%3B sulfite oxidase activity not demonstrated%3B contains heme gene gene2795 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14005 SH05_RS14010 SH05_14020 SH05_RS14010 2796264 2796914 + metal-binding protein ZinT gene gene2796 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14010 SH05_RS14015 SH05_14025 SH05_RS14015 2797257 2797787 + cytochrome b561 homolog 1 gene gene2797 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14015 SH05_RS14020 SH05_14030 SH05_RS14020 2797810 2798052 + hypothetical protein gene gene2798 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14020 SH05_RS14025 SH05_14035 SH05_RS14025 2798357 2798446 - tRNA-Ser tRNA gene2799 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14025 SH05_RS14030 SH05_14040 SH05_RS14030 2798540 2799337 + protein MtfA Mlc anti-repressor%3B regulates ptsG by binding and inactivating Mlc gene gene2800 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14030 SH05_RS14035 SH05_14045 SH05_RS14035 2799438 2799513 + tRNA-Asn tRNA gene2801 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14035 SH05_RS14040 SH05_14050 SH05_RS14040 2799827 2806903 + adhesin gene gene2802 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14040 SH05_RS14045 SH05_RS14045 SH05_RS14045 2807165 2808217 - hypothetical protein gene gene2803 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14045 SH05_RS14050 SH05_14060 SH05_RS14050 2808532 2809848 + shikimate transporter gene gene2804 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14050 SH05_RS14055 SH05_14065 SH05_RS14055 2809950 2811404 + AMP nucleosidase Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile gene gene2805 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14055 SH05_RS14060 SH05_14070 SH05_RS14060 2811747 2812463 + transcriptional regulator gene gene2806 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14060 SH05_RS14065 SH05_14075 SH05_RS14065 2812916 2812991 - tRNA-Asn tRNA gene2807 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14065 SH05_RS14070 SH05_14080 SH05_RS14070 2813092 2814546 - MATE family multidrug exporter gene gene2808 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14070 SH05_RS14075 SH05_14085 SH05_RS14075 2814740 2814815 + tRNA-Asn tRNA gene2809 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14075 SH05_RS14080 SH05_14090 cbl cbl 2814853 2815803 - transcriptional regulator LysR-type transcriptional regulator similar to CysB%3B contains helix-turn-helix (HTH) motif%3B in Escherichia coli this protein regulates two operons consisting of ABC transporters that are part of the cys regulon%3B regulated by CysB%3B DNA-binding transcriptional activator for the ssuEADCB and tauABCD operons gene gene2810 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14080 SH05_RS14085 SH05_14095 SH05_RS14085 2815905 2816822 - nitrogen assimilation regulatory protein nac Transcriptional activator for the hut%2C put and ure operons and repressor for the gdh and gltB operons in response to nitrogen limitation gene gene2811 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14085 SH05_RS14090 SH05_14100 SH05_RS14090 2817149 2817224 + tRNA-Asn tRNA gene2812 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14090 SH05_RS14095 SH05_14105 SH05_RS14095 2817280 2818212 - transpeptidase catalyzes th removal of D-alanine and attachment of the murein lipoprotein to the peptidoglycan tetrapeptide chain gene gene2813 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14095 SH05_RS14100 SH05_14110 cobT cobT 2818277 2819356 - nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5%2C6-dimethylbenzimidazole gene gene2814 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14100 SH05_RS14105 SH05_14115 cobS cobS 2819368 2820111 - adenosylcobinamide-GDP ribazoletransferase catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole gene gene2815 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14105 SH05_RS14110 SH05_14120 cobU cobU 2820108 2820653 - cobalamin biosynthesis protein CobU catalyzes ATP-dependent phosphorylation of adenosylcobinamide to form adenosylcobinamide phosphate and the addition of guanosine monophosphate to adenosylcobinamide phosphate to form adenosylcobinamide-GDP gene gene2816 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14110 SH05_RS14120 SH05_14130 SH05_RS14120 2821194 2822174 - transposase gene gene2817 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14120 SH05_RS14125 SH05_14135 SH05_RS14125 2822317 2822481 - hypothetical protein gene gene2818 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14125 SH05_RS14130 SH05_14140 SH05_RS14130 2823841 2824746 - integrase gene gene2819 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14130 SH05_RS14135 SH05_14145 SH05_RS14135 2824704 2825069 - transposase represses IS2 gene transcription gene gene2820 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14135 SH05_RS14140 SH05_14150 SH05_RS14140 2825133 2825393 + TonB-dependent receptor gene gene2821 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14140 SH05_RS14145 SH05_14155 SH05_RS14145 2825390 2826100 + hypothetical protein gene gene2822 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14145 SH05_RS14150 SH05_14160 SH05_RS14150 2826428 2829547 + antigen 43 gene gene2823 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14150 SH05_RS14155 SH05_RS14155 SH05_RS14155 2829668 2831229 + hypothetical protein gene gene2824 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14155 SH05_RS14160 SH05_14170 SH05_RS14160 2831197 2831643 + UPF0758 protein YeeS gene gene2825 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14160 SH05_RS14165 SH05_14175 SH05_RS14165 2831706 2831927 + hypothetical protein gene gene2826 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14165 SH05_RS14170 SH05_14180 SH05_RS14170 2832001 2832369 + cytoskeleton bundling-enhancing protein CbeA gene gene2827 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14170 SH05_RS14175 SH05_14185 SH05_RS14175 2832458 2832832 + toxin CbtA gene gene2828 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14175 SH05_RS14180 SH05_14190 SH05_RS14180 2832829 2833023 + hypothetical protein gene gene2829 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14180 SH05_RS14185 SH05_14195 SH05_RS14185 2833036 2833149 + hypothetical protein gene gene2830 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14185 SH05_RS14190 SH05_14200 SH05_RS14190 2833638 2833820 + hypothetical protein gene gene2831 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14190 SH05_RS14195 SH05_14205 SH05_RS14195 2833921 2834250 - hypothetical protein gene gene2832 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14195 SH05_RS14200 SH05_14210 SH05_RS14200 2834422 2835480 - hypothetical protein gene gene2833 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14200 SH05_RS14205 SH05_14215 SH05_RS14205 2835678 2836151 - DNA gyrase inhibitor gene gene2834 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14205 SH05_RS14210 SH05_14220 SH05_RS14210 2836270 2837436 - D-alanyl-D-alanine carboxypeptidase removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors%3B penicillin-binding protein 6B%3B one of four%2C DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains gene gene2835 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14210 SH05_RS14215 SH05_14225 sbcB sbcB 2837648 2839072 + exonuclease I Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates gene gene2836 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14215 SH05_RS14220 SH05_14230 SH05_RS14220 2839115 2839342 - TusA family sulfurtransferase gene gene2837 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14220 SH05_RS14225 SH05_14235 SH05_RS14225 2839356 2840414 - hypothetical protein gene gene2838 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14225 SH05_RS14230 SH05_14240 SH05_RS14230 2840593 2841951 - low-affinity putrescine importer PlaP gene gene2839 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14230 SH05_RS14235 SH05_14245 SH05_RS14235 2842218 2843147 - LysR family transcriptional regulator gene gene2840 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14235 SH05_RS14240 SH05_14250 SH05_RS14240 2843193 2844017 - hypothetical protein gene gene2841 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14240 SH05_RS14245 SH05_14255 SH05_RS14245 2844100 2844354 - toxin YoeB gene gene2842 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14245 SH05_RS14250 SH05_14260 SH05_RS14250 2844351 2844602 - antitoxin YefM Antitoxin that counteracts the effect of the YoeB toxin gene gene2843 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14250 SH05_RS14255 SH05_14265 hisG hisG 2845081 2845944 + ATP phosphoribosyltransferase long form of enzyme%3B catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate%3B crucial role in histidine biosynthesis%3B forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors gene gene2844 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14255 SH05_RS14260 SH05_14270 hisD hisD 2845950 2847254 + histidinol dehydrogenase catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis%3B functions as a dimer gene gene2845 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14260 SH05_RS14265 SH05_14275 SH05_RS14265 2847251 2848321 + histidinol-phosphate aminotransferase catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis gene gene2846 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14265 SH05_RS14270 SH05_14280 SH05_RS14270 2848321 2849388 + histidine biosynthesis bifunctional protein HisB catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate gene gene2847 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14270 SH05_RS14275 SH05_14285 hisH hisH 2849388 2849978 + imidazole glycerol phosphate synthase subunit HisH with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate%2C 5-aminoimidazol-4-carboxamide ribonucleotide%2C and glutamate in histidine biosynthesis%3B the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide gene gene2848 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14275 SH05_RS14280 SH05_14290 SH05_RS14280 2849978 2850715 + 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase gene gene2849 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14280 SH05_RS14285 SH05_14295 SH05_RS14285 2850697 2851473 + imidazole glycerol phosphate synthase subunit HisF gene gene2850 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14285 SH05_RS14290 SH05_14300 SH05_RS14290 2851467 2852078 + histidine biosynthesis bifunctional protein HisIE catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis gene gene2851 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14290 SH05_RS14295 SH05_14305 SH05_RS14295 2852174 2853154 - chain length determinant protein regulator of length of O-antigen component of lipopolysaccharide chains gene gene2852 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14295 SH05_RS14300 SH05_14310 SH05_RS14300 2853300 2854466 - UDP-glucose 6-dehydrogenase catalyzes the formation of UDP-glucuronate from UDP-glucose gene gene2853 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14300 SH05_RS14305 SH05_14315 SH05_RS14305 2854715 2856121 - 6-phosphogluconate dehydrogenase decarboxylating catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate gene gene2854 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14305 SH05_RS14310 SH05_14320 SH05_RS14310 2856748 2857728 - transposase gene gene2855 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14310 SH05_RS14315 SH05_RS14315 SH05_RS14315 2857793 2858242 - rhamnosyltransferase gene gene2856 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14315 SH05_RS14320 SH05_14330 SH05_RS14320 2858244 2859362 - LPS biosynthesis protein gene gene2857 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14320 SH05_RS14325 SH05_14335 SH05_RS14325 2859347 2859937 - LPS biosynthesis protein WbbJ%3B catalyzes the transfer of the O-acetyl moiety to the O antigen%3B part of the lipopolysaccharide biosynthetic pathway gene gene2858 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14325 SH05_RS14330 SH05_14340 SH05_RS14330 2859918 2860910 - beta-1%2C6-galactofuranosyltransferase WbbI gene gene2859 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14330 SH05_RS14335 SH05_14345 SH05_RS14335 2860913 2862079 - O-antigen polymerase gene gene2860 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14335 SH05_RS14340 SH05_14350 SH05_RS14340 2862079 2863182 - UDP-galactopyranose mutase gene gene2861 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14340 SH05_RS14345 SH05_14355 SH05_RS14345 2863190 2864437 - polisoprenol-linked O-antigen transporter gene gene2862 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14345 SH05_RS14350 SH05_14360 SH05_RS14350 2864434 2864991 - dTDP-4-dehydrorhamnose 3%2C5-epimerase gene gene2863 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14350 SH05_RS14355 SH05_14365 SH05_RS14355 2864991 2865872 - glucose-1-phosphate thymidylyltransferase gene gene2864 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14355 SH05_RS14360 SH05_RS14360 SH05_RS14360 2865930 2866828 - dTDP-4-dehydrorhamnose reductase with dTDP-4-dehydrorhamnose 3%2C5-epimerase forms a complex known as dTDP-L-rhamnose synthetase%3B catalyzes the reduction of dTDP-4-dehydro-6-deoxy-L-mannose to dTDP-L-rhamnose gene gene2865 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14360 SH05_RS14365 SH05_14375 SH05_RS14365 2866828 2867913 - dTDP-glucose 4%2C6-dehydratase gene gene2866 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14365 SH05_RS14370 SH05_14380 SH05_RS14370 2868286 2869179 - UTP--glucose-1-phosphate uridylyltransferase gene gene2867 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14370 SH05_RS14375 SH05_14385 wcaM wcaM 2869354 2870748 - colanic acid biosynthesis protein WcaM WcaM from Salmonella enterica is essential for biofilm formation on HEp-2 cells and chicken intestinal tissue but not on a plastic surface%3B may be involved in the biosynthesis of colanic acid gene gene2868 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14375 SH05_RS14380 SH05_14390 SH05_RS14380 2870759 2871979 - colanic acid biosynthesis glycosyltransferase WcaL gene gene2869 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14380 SH05_RS14385 SH05_14395 SH05_RS14385 2871976 2873256 - colanic acid biosynthesis pyruvyl transferase WcaK gene gene2870 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14385 SH05_RS14390 SH05_14400 SH05_RS14390 2873532 2875010 - LPS biosynthesis protein gene gene2871 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14390 SH05_RS14395 SH05_14405 SH05_RS14395 2875012 2876406 - UDP-glucose--undecaprenyl-phosphate glucose-1-phosphate transferase WcaJ%3B glucose-1-phosphate transferase responsible for the addition of the first glucose-1-phosphate from UDP-glucose to the lipid carrier undecaprenyl phosphate in the biosynthesis of colanic acid gene gene2872 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14395 SH05_RS14400 SH05_14410 SH05_RS14400 2876461 2877831 - phosphomannomutase capsular polysaccharide biosynthesis protein%3B catalyzes the formation of D-mannose 6-phosphate from alpha-D-mannose 1-phosphate gene gene2873 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14400 SH05_RS14405 SH05_14415 cpsB cpsB 2877936 2879372 - mannose-1-phosphate guanylyltransferase capsular polysaccharide colanic acid biosynthesis protein%3B catalyzes the formation of GDP-mannose from GTP and alpha-D-mannose 1-phosphate gene gene2874 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14405 SH05_RS14410 SH05_14420 SH05_RS14410 2879375 2880598 - glycosyl transferase gene gene2875 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14410 SH05_RS14415 SH05_14425 SH05_RS14415 2880595 2881074 - GDP-mannose mannosyl hydrolase catalyzes the formation of GDP and D-mannose from GDP-D-mannose%3B also hydrolyzes GDP-glucose gene gene2876 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14415 SH05_RS14420 SH05_14430 SH05_RS14420 2881077 2882042 - GDP-L-fucose synthase bifunctional GDP-4-dehydro-6-deoxy-D-mannose epimerase/ GDP-4-dehydro-6-L-deoxygalactose reductase%3Bcatalyzes the formation of GDP-fucose from GDP-4-dehydro-6-deoxy-D-mannose gene gene2877 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14420 SH05_RS14425 SH05_14435 SH05_RS14425 2882045 2883166 - GDP-mannose 4%2C6-dehydratase catalyzes the formation of GDP-4-dehydro-6-deoxy-D-mannose from GDP mannose gene gene2878 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14425 SH05_RS14430 SH05_14440 SH05_RS14430 2883192 2883740 - colanic acid biosynthesis acetyltransferase WcaF gene gene2879 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14430 SH05_RS14435 SH05_14445 SH05_RS14435 2883756 2884502 - colanic acid biosynthesis glycosyltransferase WcaE gene gene2880 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14435 SH05_RS14440 SH05_14450 wcaD wcaD 2884513 2885730 - colanic acid polymerase essential for colanic acid biosynthesis%3B colanic acid is an exopolysaccharide produced under stress conditions that confers acid and heat tolerance gene gene2881 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14440 SH05_RS14445 SH05_14455 SH05_RS14445 2885705 2886922 - colanic acid biosynthesis glycosyltransferase WcaC gene gene2882 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14445 SH05_RS14450 SH05_14460 SH05_RS14450 2886919 2887407 - colanic acid biosynthesis acetyltransferase WcaB acetyltransferase believed to catalyze the addition of the acetyl group that is attached through an O linkage to the first fucosyl residue of the colanic acid repetitive unit (E unit)%3B wcaB is induced in sessile bacteria and by osmotic shock%2C and repressed when grown in rich medium gene gene2883 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14450 SH05_RS14455 SH05_14465 SH05_RS14455 2887410 2888249 - glycosyl transferase gene gene2884 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14455 SH05_RS14460 SH05_14470 SH05_RS14460 2888342 2890504 - tyrosine-protein kinase wzc Wzc%3B catalyzes the autophosphorylation on tyrosine residues which downregulates the biosynthesis of colonic acid (an extracellular polysaccharide) gene gene2885 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14460 SH05_RS14465 SH05_14475 SH05_RS14465 2890507 2890950 - protein-tyrosine phosphatase Wzb shows phosphatase activity towards the autophosphorylated Wzc protein%2C which induces colanic acid biosynthesis%3B catalyzes the phosphorylation of UDP-glucose dehydrogenase%2C an enzyme involved in colanic acid biosynthesis gene gene2886 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14465 SH05_RS14470 SH05_14480 SH05_RS14470 2890956 2892095 - lipoprotein required for the translocation of capsular polysaccharide through the outer membrane gene gene2887 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14470 SH05_RS14475 SH05_14485 SH05_RS14475 2892754 2894337 + membrane protein gene gene2888 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14475 SH05_RS14480 SH05_14490 SH05_RS14480 2894611 2896464 - protein AsmA YegA%3B inner membrane protein involved in the assembly of outer membrane proteins (OMPs)%3B asmA-null mutants show low lipopolysaccharide (LPS) levels%2C suggesting a role in LPS biogenesis and/or in restricting outer membrane fluidity%2C resulting on altered assembly of OMPs gene gene2889 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14480 SH05_RS14485 SH05_14495 SH05_RS14485 2896486 2897067 - deoxycytidine triphosphate deaminase gene gene2890 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14485 SH05_RS14490 SH05_14500 SH05_RS14490 2897159 2897800 - uridine kinase gene gene2891 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14490 SH05_RS14495 SH05_14505 SH05_RS14495 2898118 2901435 + diguanylate cyclase gene gene2892 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14495 SH05_RS14500 SH05_14510 SH05_RS14500 2901544 2902392 - DNA-3-methyladenine glycosylase 2 inducible%2C catalyzes the hydrolysis of alkylated DNA%2C releasing 3-methyladenine%2C 3-methylguanine%2C 7-methylguanine and 7-methyladenine gene gene2893 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14500 SH05_RS14505 SH05_14515 SH05_RS14505 2902406 2902513 - hypothetical protein gene gene2894 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14505 SH05_RS14510 SH05_14520 SH05_RS14510 2902526 2903878 + Hsp70 chaperone family protein gene gene2895 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14510 SH05_RS14515 SH05_14525 SH05_RS14515 2903891 2905837 - protein kinase-related non-specific DNA-binding protein gene gene2896 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14515 SH05_RS14520 SH05_14530 SH05_RS14520 2906037 2906498 + hypothetical protein gene gene2897 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14520 SH05_RS14525 SH05_14535 SH05_RS14525 2906563 2907243 - hypothetical protein gene gene2898 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14525 SH05_RS14530 SH05_14540 SH05_RS14530 2907321 2907980 - VMA domain protein gene gene2899 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14530 SH05_RS14535 SH05_14545 SH05_RS14535 2908868 2910115 + multidrug resistance protein MdtA Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC which confers resistance against novobiocin and deoxycholate gene gene2900 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14535 SH05_RS14540 SH05_14550 SH05_RS14540 2910115 2913237 + multidrug resistance protein MdtB Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC which confers resistance against novobiocin and deoxycholate gene gene2901 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14540 SH05_RS14545 SH05_14555 SH05_RS14545 2913238 2916315 + multidrug resistance protein MdtC Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC which confers resistance against novobiocin and deoxycholate gene gene2902 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14545 SH05_RS14550 SH05_14560 SH05_RS14550 2916316 2917731 + citrate/iron-citrate/zinc-citrate efflux transporter gene gene2903 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14550 SH05_RS14555 SH05_14565 SH05_RS14555 2917728 2919131 + two-component system sensor histidine kinase gene gene2904 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14555 SH05_RS14560 SH05_14570 SH05_RS14560 2919128 2919850 + two-component system response regulator response regulator in two-component regulatory system with BaeS%3B regulator of RNA synthesis%2C flagellar biosynthesis%2C chemotaxis and transport gene gene2905 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14560 SH05_RS14565 SH05_14575 SH05_RS14565 2920041 2920373 + hypothetical protein gene gene2906 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14565 SH05_RS14570 SH05_14580 SH05_RS14570 2920520 2921881 + protease gene gene2907 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14570 SH05_RS14580 SH05_RS14580 SH05_RS14580 2922587 2922853 - hypothetical protein gene gene2908 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14580 SH05_RS14585 SH05_14595 SH05_RS14585 2922841 2923173 - hypothetical protein gene gene2909 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14585 SH05_RS14590 SH05_14600 SH05_RS14590 2923564 2924463 + phosphatidylglycerol kinase metal-dependent cytosolic protein with phosphatidylglycerol kinase activity%3B undetermined physiological role gene gene2910 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14590 SH05_RS14595 SH05_14605 SH05_RS14595 2924545 2924991 - DeoR family transcriptional regulator gene gene2911 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14595 SH05_RS14600 SH05_14610 SH05_RS14600 2925088 2925387 + transposase gene gene2912 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14600 SH05_RS14605 SH05_14615 SH05_RS14605 2925384 2926250 + transposase gene gene2913 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14605 SH05_RS14610 SH05_RS14610 SH05_RS14610 2926280 2926585 - transcriptional regulator gene gene2914 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14610 SH05_RS14615 SH05_14625 SH05_RS14615 2926685 2927725 - galactitol-1-phosphate 5-dehydrogenase Zn-dependent%3B NAD(P)-binding%3B catalyzes the formation of tagatose-6-phosphate from galactitol-1-phosphate gene gene2915 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14615 SH05_RS14620 SH05_14630 SH05_RS14620 2927773 2929128 - galactitol permease IIC component gene gene2916 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14620 SH05_RS14625 SH05_14635 SH05_RS14625 2929132 2929416 - galactitol-specific phosphotransferase enzyme IIB component phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel gene gene2917 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14625 SH05_RS14630 SH05_14640 SH05_RS14630 2929447 2929899 - galactitol-specific phosphotransferase enzyme IIA component phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel gene gene2918 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14630 SH05_RS14635 SH05_14645 SH05_RS14635 2929909 2931171 - tagatose-1%2C6-bisphosphate aldolase part of the galacitol catabolism pathway%3B with GatY catalyzes the formation of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate from tagatose-1%2C6-bisphosphate gene gene2919 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14635 SH05_RS14640 SH05_14650 gatY gatY 2931200 2932054 - tagatose-1%2C6-bisphosphate aldolase catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1%2C6-bisphosphate%3B in enteric bacteria there are two D-tagatose 1%2C6-bisphosphate-specific aldolases: KbaY (also called AgaY)%2C involved in catabolism of N-acetyl-galactosamine and D-galactosamine%2C and GatY which is part of the galactitol catabolism pathway gene gene2920 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14640 SH05_RS14645 SH05_14655 SH05_RS14645 2932362 2933414 - fructose-bisphosphate aldolase catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1%2C6-bisphosphate gene gene2921 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14645 SH05_RS14650 SH05_14660 SH05_RS14650 2933671 2934948 + nucleoside transporter low affinity gene gene2922 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14650 SH05_RS14655 SH05_14665 SH05_RS14655 2934945 2935949 + ADP-ribosylglycohydrolase gene gene2923 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14655 SH05_RS14660 SH05_14670 SH05_RS14660 2935946 2936911 + kinase gene gene2924 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14660 SH05_RS14665 SH05_14675 SH05_RS14665 2936885 2937631 - transcriptional regulator gene gene2925 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14665 SH05_RS14670 SH05_14680 SH05_RS14670 2937683 2938501 - family 25 glycosyl hydrolase gene gene2926 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14670 SH05_RS14675 SH05_14685 SH05_RS14675 2938566 2939366 - hydroxymethylpyrimidine/phosphomethylpyrimidine kinase catalyzes the formation hydroxymethylpyrimidine phosphate from hydroxymethylpyrimidine and the formation of of 4-amino-2-methyl-5-diphosphomethylpyrimidine from hydroxymethylpyrimidine phosphate gene gene2927 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14675 SH05_RS14680 SH05_14690 SH05_RS14680 2939363 2940151 - hydroxyethylthiazole kinase gene gene2928 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14680 SH05_RS14685 SH05_14695 SH05_RS14685 2940374 2940646 - transcriptional regulator DNA-binding%3B binds the RcnA promotor gene gene2929 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14685 SH05_RS14690 SH05_14700 SH05_RS14690 2940767 2941591 + nickel/cobalt efflux system RcnA membrane protein conferring nickel and cobalt resistance gene gene2930 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14690 SH05_RS14695 SH05_14705 SH05_RS14695 2941810 2942148 + nickel/cobalt homeostasis protein RcnB gene gene2931 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14695 SH05_RS14700 SH05_14710 SH05_RS14700 2942230 2943264 - fimbrial-like adhesin protein gene gene2932 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14700 SH05_RS14705 SH05_14715 SH05_RS14705 2943280 2945760 - outer membrane usher protein YehB gene gene2933 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14705 SH05_RS14710 SH05_14720 SH05_RS14710 2945776 2946450 - fimbrial assembly chaperone protein StcB gene gene2934 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14710 SH05_RS14715 SH05_14725 SH05_RS14715 2946530 2947072 - fimbrial-like adhesin protein gene gene2935 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14715 SH05_RS14720 SH05_RS14720 SH05_RS14720 2947261 2947441 + hypothetical protein gene gene2936 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14720 SH05_RS14725 SH05_14735 SH05_RS14725 2947365 2947646 - DUF2574 domain-containing protein gene gene2937 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14725 SH05_RS14730 SH05_14740 SH05_RS14730 2947909 2949018 - protein mrp gene gene2938 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14730 SH05_RS14735 SH05_14745 metG metG 2949150 2951183 + methionine--tRNA ligase methionine--tRNA ligase%3B MetRS%3B adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate%3B some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not%3B four subfamilies exist based on sequence motifs and zinc content gene gene2939 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14735 SH05_RS14740 SH05_14750 SH05_RS14740 2951324 2952148 + molybdenum metabolism regulator gene gene2940 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14740 SH05_RS14745 SH05_RS14745 SH05_RS14745 2953760 2955119 + regulator gene gene2941 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14745 SH05_RS14750 SH05_14760 SH05_RS14750 2955129 2958761 + DUF4132 domain-containing protein gene gene2942 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14750 SH05_RS14755 SH05_14765 SH05_RS14755 2958822 2959139 + hypothetical protein gene gene2943 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14755 SH05_RS14760 SH05_14770 SH05_RS14760 2959446 2960534 + hexameric AAA+ MoxR family ATPase gene gene2944 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14760 SH05_RS14765 SH05_14775 SH05_RS14765 2960545 2962824 + hypothetical protein gene gene2945 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14765 SH05_RS14770 SH05_14780 SH05_RS14770 2962817 2963953 + VMA domain YehL ATPase stimulator gene gene2946 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14770 SH05_RS14775 SH05_14785 SH05_RS14775 2963950 2965794 + hypothetical protein gene gene2947 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14775 SH05_RS14780 SH05_14790 SH05_RS14780 2966075 2966536 + DUF1307 domain-containing protein gene gene2948 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14780 SH05_RS14785 SH05_14795 SH05_RS14785 2966576 2967046 - DUF1456 domain-containing protein gene gene2949 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14785 SH05_RS14790 SH05_14800 SH05_RS14790 2967093 2967812 - two-component system response regulator unknown function%3B when overproduced it confers drug-resistance gene gene2950 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14790 SH05_RS14795 SH05_14805 SH05_RS14795 2967809 2969494 - sensor histidine kinase gene gene2951 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14795 SH05_RS14800 SH05_14810 SH05_RS14800 2969716 2970447 + transcriptional regulator gene gene2952 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14800 SH05_RS14805 SH05_14815 SH05_RS14805 2970507 2970614 + membrane protein gene gene2953 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14805 SH05_RS14810 SH05_14820 SH05_RS14810 2970595 2971326 - ABC transporter permease gene gene2954 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14810 SH05_RS14815 SH05_14825 SH05_RS14815 2971331 2972257 - ABC transporter ATPase gene gene2955 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14815 SH05_RS14820 SH05_14830 SH05_RS14820 2972250 2973407 - ABC transporter permease gene gene2956 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14820 SH05_RS14825 SH05_14835 SH05_RS14825 2973414 2974331 - ABC transporter substrate-binding protein gene gene2957 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14825 SH05_RS14830 SH05_14840 SH05_RS14830 2974542 2976839 - periplasmic beta-glucosidase catalyzes the hydrolysis of terminal beta-D-glucosyl residues gene gene2958 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14830 SH05_RS14835 SH05_14845 SH05_RS14835 2977035 2978750 + lactate dehydrogenase component of the membrane-bound D-lactate oxidase%2C FAD-binding%2C NADH independent gene gene2959 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14835 SH05_RS14840 SH05_14850 pbpG pbpG 2978788 2979720 - D-alanyl-D-alanine endopeptidase specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi%3B Penicillin-binding protein 7 gene gene2960 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14840 SH05_RS14845 SH05_14855 SH05_RS14845 2979894 2980481 - hypothetical protein gene gene2961 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14845 SH05_RS14850 SH05_14860 SH05_RS14850 2980651 2981229 + hypothetical protein gene gene2962 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14850 SH05_RS14855 SH05_14865 SH05_RS14855 2981359 2982120 - oxidoreductase gene gene2963 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14855 SH05_RS14860 SH05_RS14860 SH05_RS14860 2982173 2983608 - multidrug transporter permease may be involved in resistance to puromycin%2C acriflavine and tetraphenylarsonium chloride gene gene2964 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14860 SH05_RS14865 SH05_14875 SH05_RS14865 2983832 2983915 + hypothetical protein gene gene2965 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14865 SH05_RS14870 SH05_14880 SH05_RS14870 2984288 2985235 - tRNA-dihydrouridine synthase C gene gene2966 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14870 SH05_RS14875 SH05_14885 SH05_RS14875 2985474 2985872 + hypothetical protein gene gene2967 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14875 SH05_RS14880 SH05_14890 SH05_RS14880 2985869 2986564 + hypothetical protein gene gene2968 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14880 SH05_RS14885 SH05_14895 SH05_RS14885 2986694 2987578 + cytidine deaminase Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis gene gene2969 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14885 SH05_RS14890 SH05_14900 SH05_RS14890 2987728 2988447 + protein SanA involved in vancomycin sensitivity and other barrier functions of the cell envelope gene gene2970 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14890 SH05_RS14895 SH05_14905 SH05_RS14895 2988450 2988689 + DUF2542 domain-containing protein gene gene2971 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14895 SH05_RS14900 SH05_14910 SH05_RS14900 2988883 2990121 + NAD-dependent dihydropyrimidine dehydrogenase subunit PreT gene gene2972 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14900 SH05_RS14905 SH05_14915 SH05_RS14905 2990115 2991350 + NAD-dependent dihydropyrimidine dehydrogenase subunit PreA gene gene2973 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14905 SH05_RS14910 SH05_14920 mglC mglC 2991593 2992603 - beta-methylgalactoside transporter permease ABC transporter%3B functions in galactose transport%3B part of MglA2C2B transporter complex gene gene2974 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14910 SH05_RS14915 SH05_14925 SH05_RS14915 2992745 2993248 - transposase gene gene2975 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14915 SH05_RS14920 SH05_RS14920 SH05_RS14920 2993399 2994916 - sugar ABC transporter ATP-binding protein gene gene2976 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14920 SH05_RS14925 SH05_14935 SH05_RS14925 2994977 2995975 - D-galactose-binding periplasmic protein wtih MglAC is involved in the transport of beta-methylgalactoside gene gene2977 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14925 SH05_RS14930 SH05_14940 SH05_RS14930 2996255 2997295 - transcriptional regulator controls transcription of galETKM gene gene2978 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14930 SH05_RS14935 SH05_14945 SH05_RS14935 2997285 2997488 + hypothetical protein gene gene2979 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14935 SH05_RS14940 SH05_14950 SH05_RS14940 2997437 2998594 - DUF418 domain-containing protein gene gene2980 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14940 SH05_RS14945 SH05_14955 folE folE 2998611 2999279 - GTP cyclohydrolase 1 involved in the first step of tetrahydrofolate biosynthesis%3B catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1%2C2%2C3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water%3B forms a homopolymer gene gene2981 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14945 SH05_RS14950 SH05_14960 SH05_RS14950 2999433 2999609 + hypothetical protein gene gene2982 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14950 SH05_RS14955 SH05_14965 SH05_RS14955 2999537 3000373 + S-formylglutathione hydrolase YeiG gene gene2983 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14955 SH05_RS14960 SH05_14970 SH05_RS14960 3000405 3002396 - colicin I receptor Cir%3B FeuA%3B CirA%3B receptor protein for siderophores (colicin IA%2C IB and V) and microcins (E492%2C H47%2C and M)%3B TonB-dependent%3B able to transport monomers%2C dimer%2C and linear trimers of 2%2C3-dihydorxybenzoylserine%3B outer membrane protein gene gene2984 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14960 SH05_RS14965 SH05_14975 SH05_RS14965 3002690 3004159 - lysine-specific permease gene gene2985 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14965 SH05_RS14970 SH05_14980 SH05_RS14970 3004364 3005245 - transcriptional regulator gene gene2986 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14970 SH05_RS14975 SH05_14985 SH05_RS14975 3005344 3006393 + hypothetical protein gene gene2987 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14975 SH05_RS14980 SH05_14990 SH05_RS14980 3006467 3007324 + endonuclease IV with intrinsic 3''-5'' exonuclease activity Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues gene gene2988 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14980 SH05_RS14985 SH05_14995 SH05_RS14985 3007327 3008415 + kinase gene gene2989 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14985 SH05_RS14990 SH05_15000 SH05_RS14990 3008522 3009772 - nucleoside permease NupX gene gene2990 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14990 SH05_RS14995 SH05_15005 rihB rihB 3009872 3010813 - pyrimidine-specific ribonucleoside hydrolase RihB Hydrolyzes cytidine or uridine to ribose and cytosine or uracil%2C respectively gene gene2991 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS14995 SH05_RS15000 SH05_15010 SH05_RS15000 3010943 3011641 + Crp/Fnr family transcriptional regulator activator of nucleoside metabolism gene gene2992 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15000 SH05_RS15005 SH05_15015 SH05_RS15005 3011712 3012962 - nucleoside transporter gene gene2993 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15005 SH05_RS15010 SH05_15020 SH05_RS15010 3013056 3013994 - pseudouridine-5'-phosphate glycosidase gene gene2994 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15010 SH05_RS15015 SH05_15025 SH05_RS15015 3013982 3014923 - pseudouridine kinase gene gene2995 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15015 SH05_RS15020 SH05_15030 SH05_RS15020 3015346 3017037 - PTS fructose EIIBC component phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel gene gene2996 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15020 SH05_RS15025 SH05_15035 fruK fruK 3017054 3017992 - 1-phosphofructokinase converts fructose-1-phosphate and ATP to fructose-1%2C6-bisphosphate and ADP%3B highly specific for fructose-1-phopshate%3B similar to PfkB%3B forms homodimers gene gene2997 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15025 SH05_RS15030 SH05_15040 SH05_RS15030 3017992 3019122 - multiphosphoryl transfer protein phosphoenolpyruvate (PEP)-dependent%2C sugar transporting phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIA is phosphorylated by phospho-HPr which then transfers the phosphoryl group to the IIB component gene gene2998 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15030 SH05_RS15035 SH05_15045 SH05_RS15035 3019490 3020671 + sugar transporter gene gene2999 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15035 SH05_RS15040 SH05_15050 SH05_RS15040 3020668 3020922 - hypothetical protein gene gene3000 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15040 SH05_RS15045 SH05_15055 SH05_RS15045 3021077 3021649 + elongation factor P-like protein Stimulates the peptidyltransferase activity of the 70S ribosome and enhances dipeptide synthesis with N-formylmethionyl-tRNA and puromycin in vitro%2C suggesting its involvement in the formation of the first peptide bond of a protein gene gene3001 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15045 SH05_RS15050 SH05_15060 SH05_RS15050 3021872 3023338 + NAD-dependent D-mannonate oxidoreductase gene gene3002 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15050 SH05_RS15055 SH05_15065 SH05_RS15055 3023456 3024442 + GTPase gene gene3003 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15055 SH05_RS15060 SH05_15070 SH05_RS15060 3024481 3025194 + lipid A 1-diphosphate synthase gene gene3004 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15060 SH05_RS15065 SH05_15075 spr spr 3025606 3026172 + murein DD-endopeptidase MepS/Murein LD-carboxypeptidase mutational suppressor of prc thermosensitivity gene gene3005 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15065 SH05_RS15070 SH05_15080 SH05_RS15070 3026353 3027909 + protein Rtn involved in resistance to the phages N4 and lambda gene gene3006 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15070 SH05_RS15075 SH05_15085 SH05_RS15075 3027991 3029805 + microcin ABC transporter substrate-binding protein with YejBEF is involved in resistance to microcin C gene gene3007 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15075 SH05_RS15080 SH05_15090 SH05_RS15080 3029806 3030900 + ABC transporter permease with YejAEF is involved in resistance to microcin C gene gene3008 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15080 SH05_RS15085 SH05_15095 SH05_RS15085 3030900 3031925 + ABC transporter permease part of the microcin C transport system gene gene3009 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15085 SH05_RS15090 SH05_15100 SH05_RS15090 3031927 3033516 + microcin C ABC transporter ATPase with YejAEF is involved in resistance to microcin C gene gene3010 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15090 SH05_RS15095 SH05_15105 SH05_RS15095 3033520 3033864 - hypothetical protein gene gene3011 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15095 SH05_RS15100 SH05_15110 SH05_RS15100 3034197 3035387 - Bcr/CflA family drug resistance efflux transporter Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance gene gene3012 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15100 SH05_RS15105 SH05_15115 SH05_RS15105 3035415 3036110 - ribosomal small subunit pseudouridine synthase A catalyzes the synthesis pseudouridine from uracil-516 in 16S ribosomal RNA gene gene3013 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15105 SH05_RS15110 SH05_15120 SH05_RS15110 3036259 3038019 + ATP-dependent DNA or RNA helicase gene gene3014 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15110 SH05_RS15115 SH05_15125 SH05_RS15115 3038144 3038428 + 50S ribosomal protein L25 gene gene3015 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15115 SH05_RS15120 SH05_15130 SH05_RS15120 3038567 3039574 - nucleoid-associated protein gene gene3016 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15120 SH05_RS15125 SH05_15135 SH05_RS15125 3039756 3039983 + hypothetical protein gene gene3017 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15125 SH05_RS15130 SH05_15140 SH05_RS15130 3040003 3041763 + hypothetical protein gene gene3018 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15130 SH05_RS15135 SH05_15145 SH05_RS15135 3041838 3041914 + tRNA-Pro tRNA gene3019 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15135 SH05_RS15140 SH05_15150 SH05_RS15140 3042017 3044527 - membrane protein gene gene3020 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15140 SH05_RS15145 SH05_15155 SH05_RS15145 3044692 3045672 - transposase gene gene3021 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15145 SH05_RS15150 SH05_15160 SH05_RS15150 3045838 3046095 - hypothetical protein gene gene3022 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15150 SH05_RS15155 SH05_15165 SH05_RS15155 3046127 3046774 + transcriptional regulator nitrate/nitrite response regulator NarP%3B NarP is phosphorylated by NarX and NarQ and can activate fdnG and nitrite or nitrate reductase systems%3B represses expression of other anaerobic genes gene gene3023 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15155 SH05_RS15160 SH05_15170 SH05_RS15160 3046985 3048037 - cytochrome c-type biogenesis protein CcmH cytochrome c-type biogenesis protein%3B involved in the attachment of heme to cytochrome c gene gene3024 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15160 SH05_RS15165 SH05_15175 SH05_RS15165 3048034 3048591 - thiol:disulfide interchange protein DsbE cytochrome c-type biogenesis thioredoxin%3B involved in the reduction of disulfide bonds to allow heme bonding gene gene3025 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15165 SH05_RS15170 SH05_15180 SH05_RS15170 3048588 3050531 - cytochrome c-type biogenesis protein CcmF cytochrome c-type biogenesis protein%3B required for the transfer of heme to apocytochrome c gene gene3026 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15170 SH05_RS15175 SH05_15185 SH05_RS15175 3050528 3051007 - cytochrome c-type biogenesis protein CcmE CycJ%3B periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes%3B requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome%3B part of the cytochrome c maturation system%3B periplasmic protein anchored to the inner membrane gene gene3027 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15175 SH05_RS15180 SH05_15190 SH05_RS15180 3051004 3051213 - heme exporter protein D is invovled in heme transfer during cytochrome c biogenesis%3B acts to stabilize CcmC and CcmE gene gene3028 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15180 SH05_RS15185 SH05_15195 SH05_RS15185 3051210 3051947 - heme exporter protein C with CcmABDE is involved in the transport of protoheme IX%3B CcmC is required for heme transfer to CcmE gene gene3029 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15185 SH05_RS15190 SH05_15200 SH05_RS15190 3051989 3052648 - heme ABC transporter permease with CcmABCE is involved in the transport of protoheme IX%3B CcmB is required for the release of holoCcmE from CcmC gene gene3030 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15190 SH05_RS15195 SH05_15205 SH05_RS15195 3052648 3053265 - cytochrome C biogenesis protein CcmA gene gene3031 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15195 SH05_RS15200 SH05_15210 SH05_RS15200 3053284 3053886 - cytochrome c-type protein NapC with NapABDFGH functions as a nitrate reductase%3B NapC functions as an electron shuttle between NapAB and NapGH or quinone gene gene3032 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15200 SH05_RS15205 SH05_15215 napB napB 3053896 3054345 - periplasmic nitrate reductase electron transfer subunit small subunit of periplasmic nitrate reductase%3B receives electrons from the membrane-bound NapC and passes them to NapA gene gene3033 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15205 SH05_RS15210 SH05_15220 napH napH 3054342 3055205 - ferredoxin-type protein NapH part of NapHG quinol dehydrogenase%3B couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA gene gene3034 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15210 SH05_RS15215 SH05_15225 napG napG 3055192 3055887 - ferredoxin-type protein NapG part of NapHG quinol dehydrogenase%3B couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA%3B secreted by twin arginine translocation pathway gene gene3035 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15215 SH05_RS15220 SH05_15230 SH05_RS15220 3055894 3058380 - periplasmic nitrate reductase periplasmic%3B catalytic subunit%3B with NapBC catalyzes the reduction of nitrate to nitrite%3B NapAB receives electrons from NapC gene gene3036 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15220 SH05_RS15225 SH05_15235 SH05_RS15225 3058377 3058640 - protein NapD gene gene3037 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15225 SH05_RS15230 SH05_15240 SH05_RS15230 3058630 3059124 - ferredoxin-type protein NapF Predicted role in electron transfer to the periplasmic nitrate reductase protein NapA. gene gene3038 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15230 SH05_RS15235 SH05_15245 SH05_RS15235 3059233 3059397 + hypothetical protein gene gene3039 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15235 SH05_RS15240 SH05_15250 SH05_RS15240 3059532 3060020 + ecotin serine protease inhibitor%2C inhibits trypsin and other proteases gene gene3040 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15240 SH05_RS15245 SH05_15255 SH05_RS15245 3060735 3062381 - malate:quinone oxidoreductase gene gene3041 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15245 SH05_RS15250 SH05_15260 SH05_RS15250 3062599 3064242 - ABC transporter ATP-binding protein efflux pump for the antibacterial peptide microcin J25 gene gene3042 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15250 SH05_RS15255 SH05_15265 SH05_RS15255 3064318 3064968 - alpha-ketoglutarate-dependent dioxygenase AlkB gene gene3043 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15255 SH05_RS15260 SH05_15270 SH05_RS15260 3064968 3066032 - bifunctional transcriptional activator/DNA repair enzyme Ada regulates genes involved in the repair of alkylated DNA%3B repairs DNA containing 6-O-methylguanine gene gene3044 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15260 SH05_RS15265 SH05_15275 SH05_RS15265 3066106 3067161 - FAD--protein FMN transferase catalyzes the conversion of aminoimidazole ribotide to the 4-amino-5-hydroxymethyl-2-methyl pyrimidine moiety of thiamine%3B involved in the maintenance and/or assembly of sulfur clusters%3B periplasmic lipoporotein anchored to the inner membrane%3B part of the thiamine pyrophosphate biosynthesis pathway gene gene3045 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15265 SH05_RS15270 SH05_15280 SH05_RS15270 3067273 3068376 - outer membrane protein C gene gene3046 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15270 SH05_RS15275 SH05_RS15275 SH05_RS15275 3068635 3068727 - glutamate decarboxylase gene gene3047 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15275 SH05_RS15280 SH05_15290 SH05_RS15280 3068768 3068893 - hypothetical protein gene gene3048 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15280 SH05_RS15285 SH05_15295 SH05_RS15285 3069115 3071787 + phosphotransferase RcsD gene gene3049 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15285 SH05_RS15290 SH05_15300 SH05_RS15290 3071804 3072454 + transcriptional regulator two-component response regulator RscB regulates the genes involved in capsule biosynthesis and cell division%3B probably phosphorylated by RcsC or RcsF gene gene3050 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15290 SH05_RS15295 SH05_15305 SH05_RS15295 3072654 3075503 - histidine kinase gene gene3051 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15295 SH05_RS15300 SH05_15310 SH05_RS15300 3075670 3077496 + PAS domain-containing two-component system sensor histidine kinase with AtoC is a member of a two-component regulatory system involved in the transcriptional regulation of the ato genes for acetoacetate metabolism gene gene3052 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15300 SH05_RS15305 SH05_15315 SH05_RS15305 3077493 3078878 + acetoacetate metabolism regulatory protein AtoC DNA-binding response regulator in two-component regulatory system with ZraS%3B response regulator/sigma54 interaction protein gene gene3053 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15305 SH05_RS15310 SH05_15320 SH05_RS15310 3079074 3079736 + acetate CoA-transferase subunit alpha gene gene3054 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15310 SH05_RS15315 SH05_15325 SH05_RS15315 3079736 3080386 + acetate CoA-transferase subunit beta gene gene3055 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15315 SH05_RS15320 SH05_15330 SH05_RS15320 3080383 3081705 + short-chain fatty acids transporter gene gene3056 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15320 SH05_RS15325 SH05_15335 SH05_RS15325 3081736 3082920 + acetyl-CoA acetyltransferase Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase%2C catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation gene gene3057 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15325 SH05_RS15330 SH05_15340 SH05_RS15330 3082994 3083770 - hypothetical protein gene gene3058 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15330 SH05_RS15335 SH05_15345 SH05_RS15335 3083775 3085424 - host defense protein gene gene3059 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15335 SH05_RS15340 SH05_15350 SH05_RS15340 3085425 3085910 - alpha-2-macroglobulin gene gene3060 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15340 SH05_RS15345 SH05_15355 SH05_RS15345 3085926 3089939 - membrane protein gene gene3061 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15345 SH05_RS15350 SH05_15360 SH05_RS15350 3089963 3090586 - hypothetical protein gene gene3062 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15350 SH05_RS15355 SH05_15365 SH05_RS15355 3090583 3092271 - hypothetical protein gene gene3063 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15355 SH05_RS15360 SH05_15370 SH05_RS15360 3092420 3095047 - DNA gyrase subunit A gene gene3064 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15360 SH05_RS15365 SH05_15375 SH05_RS15365 3095194 3095916 + ubiquinone biosynthesis O-methyltransferase Involved in ubiquinone biosynthesis gene gene3065 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15365 SH05_RS15370 SH05_15380 SH05_RS15370 3096044 3099796 - adhesin gene gene3066 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15370 SH05_RS15375 SH05_15385 SH05_RS15375 3100268 3100411 + hypothetical protein gene gene3067 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15375 SH05_RS15380 SH05_15390 SH05_RS15380 3100492 3102777 + ribonucleoside-diphosphate reductase 1 subunit alpha Catalyzes the rate-limiting step in dNTP synthesis gene gene3068 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15380 SH05_RS15385 SH05_15395 SH05_RS15385 3103011 3104141 + ribonucleoside-diphosphate reductase 1 subunit beta B2 or R2 protein%3B type 1a enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdA gene gene3069 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15385 SH05_RS15390 SH05_15400 SH05_RS15390 3104141 3104395 + ferredoxin involved with ribonucleotide reductase diferric-tyrosyl radical (Y*) cofactor maintenance plays a role in maintenance and possibly the biosynthesis of diferric-tyrosyl radical cofactor%2C essential for nucleotide reduction catalyzed by ribonucleotide reductases gene gene3070 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15390 SH05_RS15395 SH05_15405 SH05_RS15395 3104449 3105099 - protein InaA gene gene3071 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15395 SH05_RS15400 SH05_15410 SH05_RS15400 3105314 3105520 + hypothetical protein gene gene3072 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15400 SH05_RS15405 SH05_15415 glpQ glpQ 3105562 3106638 - glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to glycerol 3-phosphate and the corresponding alcohols%3B periplasmic gene gene3073 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15405 SH05_RS15410 SH05_15420 glpT glpT 3106643 3108001 - glycerol-3-phosphate transporter catalyzes the uptake of glycerol-3-phosphate into the cell with the simultaneous export of inorganic phosphate from the cell gene gene3074 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15410 SH05_RS15415 SH05_15425 glpA glpA 3108274 3109902 + anaerobic glycerol-3-phosphate dehydrogenase subunit A anaerobic%2C catalyzes the conversion of glycerol 3-phosphate to dihydroxyacetone using fumarate or nitrate as electron acceptor gene gene3075 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15415 SH05_RS15420 SH05_15430 SH05_RS15420 3109892 3111151 + anaerobic glycerol-3-phosphate dehydrogenase subunit B sn-glycerol-3-phosphate dehydrogenase (anaerobic)%3B catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate%3B part of GlpABC complex%3B presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters gene gene3076 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15420 SH05_RS15425 SH05_15435 glpC glpC 3111148 3112338 + anaerobic glycerol-3-phosphate dehydrogenase subunit C anaerobic%3B with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate gene gene3077 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15425 SH05_RS15430 SH05_15440 SH05_RS15430 3112531 3113430 + transposase gene gene3078 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15430 SH05_RS15435 SH05_15445 SH05_RS15435 3113443 3113628 + hypothetical protein gene gene3079 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15435 SH05_RS15440 SH05_15450 SH05_RS15440 3113669 3114472 - 2-keto-3-deoxy-L-rhamnonate aldolase catalyzes the retro-aldol cleavage of 2-keto-3-deoxy-L-rhamnonate to pyruvate and lactaldehyde gene gene3080 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15440 SH05_RS15445 SH05_15455 SH05_RS15445 3114490 3115779 - transporter gene gene3081 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15445 SH05_RS15450 SH05_RS15450 SH05_RS15450 3115836 3117040 - rhamnonate dehydratase catalyzes the formation of 2-keto-3-deoxy-L-rhamnonate from L-rhamnonate gene gene3082 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15450 SH05_RS15455 SH05_15465 SH05_RS15455 3117055 3117837 - transcriptional regulator gene gene3083 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15455 SH05_RS15460 SH05_15470 SH05_RS15460 3118057 3119259 - inactive PncC family protein gene gene3084 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15460 SH05_RS15465 SH05_15475 SH05_RS15465 3119359 3119901 - porin gene gene3085 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15465 SH05_RS15470 SH05_15480 SH05_RS15470 3120180 3120605 + nucleoside triphosphatase catalyzes the hydrolysis of nucleoside triphosphates gene gene3086 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15470 SH05_RS15475 SH05_15485 SH05_RS15475 3120644 3121246 - LPS core heptose(II)-phosphate phosphatase catalyzes the of heptose(II) of the outer membrane lipopolysaccharide core gene gene3087 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15475 SH05_RS15480 SH05_15490 SH05_RS15480 3121554 3122693 + UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase catalyzes the conversion of UDP-4-keto-arabinose to UDP-4-amino-4-deoxy-L-arabinose gene gene3088 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15480 SH05_RS15485 SH05_15495 SH05_RS15485 3122697 3123665 + undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate gene gene3089 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15485 SH05_RS15490 SH05_15500 SH05_RS15490 3123665 3125647 + bifunctional polymyxin resistance protein ArnA Bifunctional polymyxin resistance arnA protein%3B catalyzes the decarboxylation of UDP-glucuronic acid to UDP-4-keto-arabinose and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose to form UDP-L-4-formamido-arabinose%3B active in certain mutant strains gene gene3090 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15490 SH05_RS15495 SH05_15505 SH05_RS15495 3125644 3126534 + 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD catalyzes the formation of 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol from 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol gene gene3091 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15495 SH05_RS15500 SH05_15510 arnT arnT 3126534 3128186 + undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase catalyzes the addition of 4-amino-4-deoxy-L-arabinose to lipid A gene gene3092 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15500 SH05_RS15505 SH05_15515 SH05_RS15505 3128183 3128518 + 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE with ArnE is involved in transporting 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol from the cytoplasmic face to the periplasmic face of the inner membrane gene gene3093 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15505 SH05_RS15510 SH05_15520 SH05_RS15510 3128518 3128904 + 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF with ArnE is responsible for the transport of 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol from the cytoplasm to the periplasm gene gene3094 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15510 SH05_RS15515 SH05_15525 SH05_RS15515 3128898 3129164 - signal transduction protein PmrD with BasR regulates genes involved in polymyxin resistance gene gene3095 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15515 SH05_RS15520 SH05_15530 SH05_RS15520 3129274 3130629 - 2-succinylbenzoate--CoA ligase gene gene3096 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15520 SH05_RS15525 SH05_15535 SH05_RS15525 3130626 3131588 - o-succinylbenzoate synthase catalyzes the dehydration of 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate gene gene3097 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15525 SH05_RS15530 SH05_15540 SH05_RS15530 3131588 3132445 - 1%2C4-dihydroxy-2-naphthoyl-CoA synthase catalyzes the formation of 1%2C4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA gene gene3098 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15530 SH05_RS15535 SH05_15545 SH05_RS15535 3132460 3133218 - 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase catalyzes the formation of (1 R%2C6 R)-2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate in menaquinone biosynthesis gene gene3099 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15535 SH05_RS15540 SH05_15550 SH05_RS15540 3133215 3134885 - 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase SEPHCHC synthase%3B forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1-carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis gene gene3100 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15540 SH05_RS15545 SH05_15555 SH05_RS15545 3134974 3136269 - isochorismate synthase MenF gene gene3101 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15545 SH05_RS15550 SH05_15560 SH05_RS15550 3136348 3136653 - protein ElaB gene gene3102 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15550 SH05_RS15555 SH05_15565 SH05_RS15555 3136708 3137169 - protein ElaA gene gene3103 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15555 SH05_RS15560 SH05_15570 SH05_RS15560 3137234 3138151 + hypothetical protein RNase BN%3B member of metallo-beta-lactamase family%3B the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase%3B in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not%3B associates with two zinc ions gene gene3104 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15560 SH05_RS15565 SH05_15575 SH05_RS15565 3138342 3139550 + deubiquitinase ElaD%3B specific cysteine protease which targets ubiquitin and ubiquitin-like proteins covalently bound to target proteins%3B SseL in Salmonella is required for macrophage killing and virulence%2C and it is secreted by the salmonella pathogenicity island 2 type III secretion system gene gene3105 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15565 SH05_RS15570 SH05_15580 SH05_RS15570 3139621 3141348 - VWA domain-containing protein gene gene3106 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15570 SH05_RS15575 SH05_15585 SH05_RS15575 3141486 3142457 + M28A family peptidase gene gene3107 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15575 SH05_RS15580 SH05_15590 SH05_RS15580 3142560 3143063 + hypothetical protein gene gene3108 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15580 SH05_RS15585 SH05_15595 SH05_RS15585 3143336 3144052 - hypothetical protein gene gene3109 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15585 SH05_RS15590 SH05_15600 SH05_RS15590 3144261 3144683 + hypothetical protein gene gene3110 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15590 SH05_RS15595 SH05_15605 SH05_RS15595 3144742 3145590 + hypothetical protein gene gene3111 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15595 SH05_RS15600 SH05_15610 SH05_RS15600 3145674 3147131 - NADH-quinone oxidoreductase subunit N Catalyzes the transfer of electrons from NADH to quinone gene gene3112 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15600 SH05_RS15605 SH05_15615 SH05_RS15605 3147138 3148667 - NADH:ubiquinone oxidoreductase subunit M gene gene3113 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15605 SH05_RS15610 SH05_15620 SH05_RS15610 3148831 3150672 - NADH-quinone oxidoreductase subunit L Catalyzes the transfer of electrons from NADH to ubiquinone gene gene3114 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15610 SH05_RS15615 SH05_15625 SH05_RS15615 3150669 3150971 - NADH-quinone oxidoreductase subunit K gene gene3115 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15615 SH05_RS15620 SH05_15630 SH05_RS15620 3150968 3151522 - NADH-quinone oxidoreductase subunit J Catalyzes the transfer of electrons from NADH to quinone gene gene3116 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15620 SH05_RS15625 SH05_15635 SH05_RS15625 3151534 3152076 - NADH-quinone oxidoreductase subunit I gene gene3117 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15625 SH05_RS15630 SH05_15640 SH05_RS15630 3152091 3153068 - NADH-quinone oxidoreductase subunit H gene gene3118 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15630 SH05_RS15635 SH05_15645 SH05_RS15635 3153065 3155791 - NADH-quinone oxidoreductase subunit G Catalyzes the transfer of electrons from NADH to quinone gene gene3119 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15635 SH05_RS15640 SH05_15650 SH05_RS15640 3155844 3157181 - NADH-quinone oxidoreductase subunit F part of NADH-ubiquinone oxidoreductase complex I%3B shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B NuoF is part of the soluble NADH dehydrogenase fragment%2C which represents the electron input part of NADH dehydrogenase gene gene3120 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15640 SH05_RS15645 SH05_15655 SH05_RS15645 3157178 3157678 - NADH-quinone oxidoreductase subunit E Catalyzes the transfer of electrons from NADH to quinone gene gene3121 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15645 SH05_RS15650 SH05_15660 SH05_RS15650 3157681 3159471 - NADH-quinone oxidoreductase subunit C/D NuoCD%3B NDH-1 shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B subunits NuoCD%2C E%2C F%2C and G constitute the peripheral sector of the complex%3B in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms gene gene3122 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15650 SH05_RS15655 SH05_15665 SH05_RS15655 3159577 3160239 - NADH-quinone oxidoreductase subunit B gene gene3123 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15655 SH05_RS15660 SH05_15670 SH05_RS15660 3160255 3160698 - NADH-quinone oxidoreductase subunit A gene gene3124 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15660 SH05_RS15665 SH05_15675 SH05_RS15665 3161329 3162267 - transcriptional regulator involved in the regulation of genes involved in flagella synthesis%2C motility and chemotaxis gene gene3125 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15665 SH05_RS15670 SH05_15680 SH05_RS15670 3163187 3164404 + glutamate--pyruvate aminotransferase AlaA broad specificity%3B family IV%3B in Corynebacterium glutamicum this protein can use glutamate%2C 2-aminobutyrate%2C and aspartate as amino donors and pyruvate as the acceptor gene gene3126 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15670 SH05_RS15675 SH05_15685 SH05_RS15675 3164488 3165087 + 5'-deoxynucleotidase YfbR gene gene3127 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15675 SH05_RS15680 SH05_15690 SH05_RS15680 3165146 3166978 - transporter gene gene3128 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15680 SH05_RS15685 SH05_15695 SH05_RS15685 3167065 3167715 - sugar phosphatase YfbT gene gene3129 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15685 SH05_RS15690 SH05_15700 SH05_RS15690 3167726 3168220 - hypothetical protein gene gene3130 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15690 SH05_RS15695 SH05_15705 SH05_RS15695 3168303 3168758 - membrane protein gene gene3131 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15695 SH05_RS15700 SH05_15710 SH05_RS15700 3168827 3168958 - hypothetical protein gene gene3132 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15700 SH05_RS15705 SH05_15715 SH05_RS15705 3169096 3170298 + acetate kinase AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation%3B utilizes magnesium and ATP%3B also involved in conversion of acetate to aceyl-CoA%3B also known to act on propionate gene gene3133 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15705 SH05_RS15710 SH05_15720 SH05_RS15710 3170373 3172517 + phosphate acetyltransferase catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate%3B when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate gene gene3134 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15710 SH05_RS15715 SH05_15725 SH05_RS15715 3172707 3174227 + inner membrane transporter%3B C4-dicarboxylate anaerobic carrier family protein gene gene3135 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15715 SH05_RS15720 SH05_15730 SH05_RS15720 3174260 3174802 - NUDIX hydrolase gene gene3136 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15720 SH05_RS15725 SH05_15735 SH05_RS15725 3174860 3175411 - phosphodiesterase gene gene3137 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15725 SH05_RS15730 SH05_15740 SH05_RS15730 3175467 3176111 - glutathione S-transferase catalyzes the formation of 2%2C4-dinitrophenyl-S-glutathione from 1-chloro-2%2C4-dinitrobenzene and glutathione gene gene3138 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15730 SH05_RS15735 SH05_15745 SH05_RS15735 3176247 3176894 + disulfide-bond oxidoreductase YfcG gene gene3139 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15735 SH05_RS15740 SH05_15750 folX folX 3176951 3177313 + D-erythro-7%2C8-dihydroneopterin triphosphate epimerase catalyzes the formation of dihydromonapterin triphosphate from dihydroneopterin triphosphate gene gene3140 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15740 SH05_RS15745 SH05_15755 SH05_RS15745 3177334 3178227 + epimerase gene gene3141 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15745 SH05_RS15750 SH05_15760 SH05_RS15750 3178275 3179165 - transposase gene gene3142 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15750 SH05_RS15755 SH05_15765 SH05_RS15755 3179362 3180135 - histidine transport ATP-binding protein HisP gene gene3143 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15755 SH05_RS15760 SH05_15770 SH05_RS15760 3180143 3180859 - histidine ABC transporter permease with HisJPQ is involved in transport of histidine%2C lysine%2C arginine and ornithine gene gene3144 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15760 SH05_RS15765 SH05_15775 SH05_RS15765 3180856 3181542 - histidine ABC transporter permease with HisJMP is involved in the transport of histidine/lysine/arginine/ornithine gene gene3145 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15765 SH05_RS15770 SH05_15780 SH05_RS15770 3181632 3182414 - histidine-binding periplasmic protein with HisPMQ is involved in the transport of histidine gene gene3146 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15770 SH05_RS15775 SH05_15785 SH05_RS15775 3182635 3183417 - lysine/arginine/ornithine-binding periplasmic protein with HisPMQ is involved in the transport of histidine gene gene3147 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15775 SH05_RS15780 SH05_15790 SH05_RS15780 3183683 3184252 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase partner protein catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate gene gene3148 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15780 SH05_RS15785 SH05_15795 SH05_RS15785 3184347 3185864 - amidophosphoribosyltransferase Catalyzes first step of the de novo purine nucleotide biosynthetic pathway gene gene3149 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15785 SH05_RS15790 SH05_15800 SH05_RS15790 3185901 3186389 - colicin V production protein membrane protein required for colicin V production gene gene3150 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15790 SH05_RS15795 SH05_15805 SH05_RS15795 3186648 3187310 - protein DedD gene gene3151 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15795 SH05_RS15800 SH05_15810 SH05_RS15800 3187300 3188568 - bifunctional protein FolC gene gene3152 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15800 SH05_RS15805 SH05_15815 SH05_RS15805 3188638 3189552 - acetyl-CoA carboxylase carboxyltransferase subunit beta catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer of AccA2D2 subunits gene gene3153 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15805 SH05_RS15810 SH05_15820 SH05_RS15810 3189708 3190367 - protein DedA gene gene3154 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15810 SH05_RS15815 SH05_15825 truA truA 3190450 3191262 - tRNA pseudouridine synthase A mediates pseudouridylation (positions 38%2C 39%2C 40) at the tRNA anticodon region which contributes to the structural stability gene gene3155 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15815 SH05_RS15820 SH05_15830 SH05_RS15820 3191262 3192275 - USG-1 protein gene gene3156 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15820 SH05_RS15825 SH05_15835 SH05_RS15825 3192341 3193477 - erythronate-4-phosphate dehydrogenase catalyzes the formation of 3-hydroxy-2-oxo-4-phosphonooxybutanoate from erythronate-4-phosphate gene gene3157 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15825 SH05_RS15830 SH05_15840 flk flk 3193576 3194571 + flagellar regulator flk in Salmonella typhimurium Flk regulates flagellar biosynthesis by inhibition of the flagellar-associated type III secretion system%3B lowers secretion levels of the anti-sigma28 factor FlgM to the periplasm%3B inner membrane-anchored protein gene gene3158 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15830 SH05_RS15835 SH05_15845 SH05_RS15835 3194568 3195746 - arabinose efflux transporter gene gene3159 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15835 SH05_RS15840 SH05_15850 SH05_RS15840 3196011 3197231 - 3-oxoacyl-ACP synthase I FabB%2C beta-Ketoacyl-ACP synthase I%2C KASI%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP gene gene3160 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15840 SH05_RS15845 SH05_15855 mnmC mnmC 3197390 3199396 + tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC 5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase/FAD-dependent demodification enzyme gene gene3161 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15845 SH05_RS15850 SH05_15860 SH05_RS15850 3199517 3199795 - hypothetical protein gene gene3162 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15850 SH05_RS15855 SH05_15865 SH05_RS15855 3199829 3200377 - elongation factor P hydroxylase gene gene3163 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15855 SH05_RS15860 SH05_15870 SH05_RS15860 3200377 3201186 - membrane protein gene gene3164 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15860 SH05_RS15865 SH05_15875 mepA mepA 3201186 3202010 - penicillin-insensitive murein endopeptidase D-alanyl-D-alanine endopeptidase%3B functions in hydrolyzing cell wall peptidoglycan%3B similar to LAS metallopeptidases%3B forms a dimer in periplasm gene gene3165 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15865 SH05_RS15870 SH05_15880 SH05_RS15870 3202014 3203099 - chorismate synthase catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis gene gene3166 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15870 SH05_RS15875 SH05_15885 SH05_RS15875 3203134 3204066 - 50S ribosomal protein L3 glutamine methyltransferase involved in methylation of ribosomal protein L3 gene gene3167 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15875 SH05_RS15880 SH05_15890 SH05_RS15880 3204232 3204783 + hypothetical protein gene gene3168 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15880 SH05_RS15885 SH05_15895 SH05_RS15885 3204854 3205675 - DUF2544 domain-containing protein gene gene3169 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15885 SH05_RS15890 SH05_15900 SH05_RS15890 3205677 3206216 - fimbrial-like adhesin protein gene gene3170 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15890 SH05_RS15895 SH05_15905 SH05_RS15895 3206213 3206701 - fimbrial-like adhesin protein gene gene3171 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15895 SH05_RS15900 SH05_15910 SH05_RS15900 3206698 3207195 - hypothetical protein gene gene3172 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15900 SH05_RS15905 SH05_15915 SH05_RS15905 3207210 3207962 - fimbrial chaperone gene gene3173 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15905 SH05_RS15910 SH05_RS15910 SH05_RS15910 3207982 3210627 - fimbrial assembly protein gene gene3174 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15910 SH05_RS15915 SH05_15925 SH05_RS15915 3210709 3211272 - fimbrial-like adhesin protein gene gene3175 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15915 SH05_RS15920 SH05_15930 SH05_RS15920 3211953 3212438 - phosphohistidine phosphatase gene gene3176 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15920 SH05_RS15925 SH05_15935 fadJ fadJ 3212641 3214785 - fatty acid oxidation complex subunit alpha multifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities: forms a heterotetramer with FadI%3B similar to FadA2B2 complex%3B involved in the anaerobic degradation of long and medium-chain fatty acids in the presence of nitrate gene gene3177 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15925 SH05_RS15930 SH05_15940 fadI fadI 3214785 3216095 - 3-ketoacyl-CoA thiolase FadI%3B fatty acid oxidation complex component beta%3B functions in a heterotetramer with FadJ%3B similar to FadA2B2 complex%3B functions in beta-oxidation of fatty acids during anaerobic growth gene gene3178 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15930 SH05_RS15935 SH05_15945 SH05_RS15935 3216276 3216560 - hypothetical protein gene gene3179 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15935 SH05_RS15940 SH05_15950 SH05_RS15940 3216932 3218272 + long-chain fatty acid transporter gene gene3180 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15940 SH05_RS15945 SH05_15955 SH05_RS15945 3218638 3219696 + hypothetical protein gene gene3181 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15945 SH05_RS15950 SH05_15960 SH05_RS15950 3219878 3220633 - phospholipid-binding lipoprotein involved in maintaining OM lipid asymmetry gene gene3182 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15950 SH05_RS15955 SH05_15965 SH05_RS15955 3220927 3221859 + hypothetical protein gene gene3183 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15955 SH05_RS15960 SH05_15970 SH05_RS15960 3221935 3222009 + tRNA-Arg tRNA gene3184 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15960 SH05_RS15965 SH05_15975 SH05_RS15965 3222171 3223328 + hypothetical protein gene gene3185 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15965 SH05_RS15970 SH05_15980 SH05_RS15970 3223481 3223843 + glucose translocase gene gene3186 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15970 SH05_RS15975 SH05_15985 SH05_RS15975 3223840 3224760 + bactoprenol glucosyl transferase gene gene3187 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15975 SH05_RS15980 SH05_15990 SH05_RS15980 3224757 3226088 + serotype-specific glucosyl transferase CPS-53 (KpLE1) prophage gene gene3188 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15980 SH05_RS15985 SH05_15995 SH05_RS15985 3226387 3226731 + tail assembly protein gene gene3189 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15985 SH05_RS15990 SH05_16000 SH05_RS15990 3226703 3227143 - hypothetical protein gene gene3190 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15990 SH05_RS15995 SH05_16005 SH05_RS15995 3227170 3227805 - hypothetical protein gene gene3191 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS15995 SH05_RS16000 SH05_16010 SH05_RS16000 3227738 3228013 - hypothetical protein gene gene3192 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16000 SH05_RS16005 SH05_16015 SH05_RS16005 3228013 3228501 - hypothetical protein gene gene3193 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16005 SH05_RS16020 SH05_16030 SH05_RS16020 3229231 3229593 + hypothetical protein gene gene3195 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16020 SH05_RS16025 SH05_16035 SH05_RS16025 3229659 3230483 + hypothetical protein gene gene3196 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16025 SH05_RS16030 SH05_16040 SH05_RS16030 3230611 3231147 + hypothetical protein gene gene3197 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16030 SH05_RS16035 SH05_16045 SH05_RS16035 3231138 3231500 + phage protein gene gene3198 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16035 SH05_RS16040 SH05_16050 SH05_RS16040 3231500 3231805 + hypothetical protein gene gene3199 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16040 SH05_RS16045 SH05_16055 SH05_RS16045 3231937 3232137 + transcriptional regulator gene gene3200 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16045 SH05_RS16050 SH05_16060 SH05_RS16050 3232321 3233256 - transcriptional regulator regulates the synthesis and expression of the dsdXA operon and dadA gene gene gene3201 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16050 SH05_RS16055 SH05_16065 SH05_RS16055 3233474 3234811 + dsdX permease gene gene3202 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16055 SH05_RS16060 SH05_16070 SH05_RS16060 3234829 3236157 + d-serine dehydratase catalyzes the formation of pyruvate from serine gene gene3203 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16060 SH05_RS16065 SH05_16075 emrB emrB 3236265 3237803 - multidrug resistance protein EmrY multidrug MFS transporte%3B with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid gene gene3204 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16065 SH05_RS16070 SH05_16080 SH05_RS16070 3237803 3238966 - multidrug resistance protein EmrK with ErmA and TolC forms a multidrug efflux system gene gene3205 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16070 SH05_RS16075 SH05_16085 SH05_RS16075 3239382 3239996 + positive transcription regulator EvgA response regulator in two-component regulatory system with EvgS%3B phosphorylated EvgA activates ompC%2C emrKY%2C gadABC%2C hdeAB and others genes%3B involved in acid resistance%2C osmotic adaption%2C and drug resistance gene gene3206 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16075 SH05_RS16080 SH05_16090 SH05_RS16080 3240211 3243594 + sensor histidine kinase gene gene3207 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16080 SH05_RS16085 SH05_16095 SH05_RS16085 3243650 3244795 - acetyl-CoA--oxalate CoA-transferase gene gene3208 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16085 SH05_RS16090 SH05_16100 SH05_RS16090 3244869 3245813 - transporter member of the AEC family of auxin efflux transporters%3B unknown function gene gene3209 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16090 SH05_RS16095 SH05_16105 SH05_RS16095 3245883 3247577 - oxalyl-CoA decarboxylase catalyzes the formation of formyl-CoA from oxalyl-CoA gene gene3210 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16095 SH05_RS16100 SH05_16110 SH05_RS16100 3247631 3248881 - formyl-CoA--oxalate CoA-transferase catalyzes the formation of oxalyl-CoA from oxalate and Formyl-CoA gene gene3211 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16100 SH05_RS16105 SH05_16115 SH05_RS16105 3249394 3250029 - hypothetical protein gene gene3212 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16105 SH05_RS16110 SH05_16120 SH05_RS16110 3250325 3250600 + lipoprotein involved in colanic acid biosynthesis gene gene3213 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16110 SH05_RS16115 SH05_16125 SH05_RS16115 3250585 3250722 - hypothetical protein gene gene3214 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16115 SH05_RS16120 SH05_16130 SH05_RS16120 3250677 3250919 - DUF2545 domain-containing protein gene gene3215 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16120 SH05_RS16125 SH05_16135 SH05_RS16125 3251272 3252192 + lipid A biosynthesis palmitoleoyltransferase Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(palmitoleoyl)-lipid IVA in cells subjected to cold shock gene gene3216 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16125 SH05_RS16130 SH05_16140 SH05_RS16130 3252684 3253922 - glutamate--pyruvate aminotransferase AlaC gene gene3217 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16130 SH05_RS16135 SH05_16145 SH05_RS16135 3254298 3255995 + sensor histidine kinase gene gene3218 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16135 SH05_RS16140 SH05_16150 SH05_RS16140 3256010 3256744 + two-component system response regulator gene gene3219 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16140 SH05_RS16145 SH05_16155 SH05_RS16145 3256757 3257614 + DNA-binding protein gene gene3220 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16145 SH05_RS16150 SH05_16160 SH05_RS16150 3257617 3260112 - multiphosphoryl transfer protein 1 gene gene3221 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16150 SH05_RS16155 SH05_16165 SH05_RS16155 3260137 3261174 - aminopeptidase YpdE metalloprotein gene gene3222 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16155 SH05_RS16160 SH05_16170 SH05_RS16160 3261174 3262259 - aminopeptidase YpdF Xaa-Pro aminopeptidase%3B limited methionine aminopeptidase gene gene3223 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16160 SH05_RS16165 SH05_16175 SH05_RS16165 3262274 3263521 - Fructose-like permease IIC component 1 gene gene3224 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16165 SH05_RS16170 SH05_16180 SH05_RS16170 3263543 3263869 - fructose-like phosphotransferase enzyme IIB component 1 gene gene3225 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16170 SH05_RS16175 SH05_16185 glk glk 3264088 3265053 - glucokinase catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate gene gene3226 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16175 SH05_RS16180 SH05_16190 SH05_RS16180 3265257 3266513 + ion channel protein gene gene3227 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16180 SH05_RS16185 SH05_16195 SH05_RS16185 3266628 3266954 + hypothetical protein gene gene3228 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16185 SH05_RS16190 SH05_RS16190 SH05_RS16190 3266875 3267036 + hypothetical protein gene gene3229 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16190 SH05_RS16195 SH05_16205 SH05_RS16195 3267095 3268333 - divalent metal cation transporter MntH gene gene3230 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16195 SH05_RS16200 SH05_16210 SH05_RS16200 3268669 3269871 + nucleoside permease NupC gene gene3231 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16200 SH05_RS16205 SH05_16215 SH05_RS16205 3269958 3271070 + transposase gene gene3232 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16205 SH05_RS16210 SH05_16220 SH05_RS16210 3271270 3273459 - diguanylate cyclase gene gene3233 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16210 SH05_RS16215 SH05_16225 SH05_RS16215 3273668 3273743 - tRNA-Ala tRNA gene3234 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16215 SH05_RS16220 SH05_16230 SH05_RS16220 3273783 3273858 - tRNA-Ala tRNA gene3235 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16220 SH05_RS16225 SH05_16235 SH05_RS16225 3274094 3274438 + DUF1323 family DNA-binding protein gene gene3236 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16225 SH05_RS16230 SH05_16240 SH05_RS16230 3274440 3274832 + DUF1323 family DNA-binding protein gene gene3237 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16230 SH05_RS16235 SH05_16245 gltX gltX 3274884 3276299 - glutamate--tRNA ligase catalyzes a two-step reaction%2C first charging an glutamate molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B contains discriminating and non-discriminating subtypes gene gene3238 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16235 SH05_RS16240 SH05_16250 SH05_RS16240 3276558 3276633 + tRNA-Val tRNA gene3239 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16240 SH05_RS16245 SH05_16255 SH05_RS16245 3276678 3276753 + tRNA-Val tRNA gene3240 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16245 SH05_RS16250 SH05_16260 SH05_RS16250 3276800 3276875 + tRNA-Val tRNA gene3241 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16250 SH05_RS16255 SH05_16265 SH05_RS16255 3276880 3276955 + tRNA-Lys tRNA gene3242 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16255 SH05_RS16260 SH05_16270 SH05_RS16260 3277220 3278104 - transcriptional regulator gene gene3243 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16260 SH05_RS16265 SH05_16275 SH05_RS16265 3278145 3278303 - hypothetical protein gene gene3244 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16265 SH05_RS16270 SH05_16280 SH05_RS16270 3278356 3279612 - xanthosine permease gene gene3245 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16270 SH05_RS16275 SH05_16285 SH05_RS16275 3279672 3280505 - purine nucleoside phosphorylase gene gene3246 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16275 SH05_RS16280 SH05_16290 SH05_RS16280 3280754 3281518 + outer membrane protein gene gene3247 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16280 SH05_RS16285 SH05_16295 SH05_RS16285 3281557 3282483 - LysR family transcriptional regulator gene gene3248 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16285 SH05_RS16290 SH05_16300 SH05_RS16290 3282573 3283571 + inorganic ion transporter gene gene3249 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16290 SH05_RS16295 SH05_16305 SH05_RS16295 3283568 3283786 - DUF3820 domain-containing protein gene gene3250 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16295 SH05_RS16300 SH05_16310 ligA ligA 3283788 3285803 - DNA ligase this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction%3B essential for DNA replication and repair of damaged DNA%3B similar to ligase LigB gene gene3251 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16300 SH05_RS16305 SH05_16315 SH05_RS16305 3285874 3286860 - FtsZ stabilizer interacts with cell division protein FitsZ and may be required to anchor septal ring structure gene gene3252 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16305 SH05_RS16310 SH05_16320 SH05_RS16310 3287090 3287851 + sulfate transporter CysZ gene gene3253 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16310 SH05_RS16315 SH05_16325 SH05_RS16315 3288036 3289007 + cysteine synthase A gene gene3254 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16315 SH05_RS16320 SH05_16330 SH05_RS16320 3289391 3289648 + phosphocarrier protein HPr gene gene3255 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16320 SH05_RS16325 SH05_16335 SH05_RS16325 3289693 3291420 + phosphoenolpyruvate-protein phosphotransferase Phosphotransferase system%2C enzyme I%3B transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein%3B part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%2C a major carbohydrate active-transport system gene gene3256 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16325 SH05_RS16330 SH05_16340 SH05_RS16330 3291461 3291970 + glucose-specific phosphotransferase enzyme IIA component phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel gene gene3257 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16330 SH05_RS16335 SH05_16345 pdxK pdxK 3292013 3292864 - pyridoxine kinase catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal gene gene3258 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16335 SH05_RS16340 SH05_16350 SH05_RS16340 3292969 3293343 + hypothetical protein gene gene3259 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16340 SH05_RS16345 SH05_16355 SH05_RS16345 3293376 3294110 + WGR domain protein gene gene3260 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16345 SH05_RS16350 SH05_16360 cysM cysM 3294299 3295210 - cysteine synthase B catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide gene gene3261 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16350 SH05_RS16355 SH05_16365 SH05_RS16355 3295344 3296441 - sulfate/thiosulfate import ATP-binding protein CysA gene gene3262 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16355 SH05_RS16360 SH05_16370 cysW cysW 3296431 3297306 - sulfate ABC transporter permease Part of the ABC transporter complex cysAWTP involved in sulfate/thiosulfate import gene gene3263 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16360 SH05_RS16365 SH05_16375 SH05_RS16365 3297306 3298139 - sulfate ABC transporter permease gene gene3264 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16365 SH05_RS16370 SH05_16380 SH05_RS16370 3298139 3299155 - thiosulfate-binding protein gene gene3265 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16370 SH05_RS16375 SH05_16385 SH05_RS16375 3299459 3300250 - oxidoreductase UcpA gene gene3266 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16375 SH05_RS16380 SH05_16390 SH05_RS16380 3300379 3301236 - transcriptional regulator repressor for murPQ%3B N-acetylmuramic acid 6-phosphate inducible gene gene3267 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16380 SH05_RS16385 SH05_16395 SH05_RS16385 3301400 3302296 + N-acetylmuramic acid 6-phosphate etherase catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate%3B involved in MurNAc dissimilation pathway gene gene3268 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16385 SH05_RS16390 SH05_16400 murP murP 3302300 3303724 + PTS N-acetylmuramic acid EIIBC component belongs to PEP-dependent PTS system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel%3B requires crr-encoded enzyme IIA-glucose component gene gene3269 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16390 SH05_RS16395 SH05_16405 SH05_RS16395 3303729 3305033 + penicillin-binding protein gene gene3270 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16395 SH05_RS16400 SH05_16410 SH05_RS16400 3305273 3306172 - deferrochelatase/peroxidase gene gene3271 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16400 SH05_RS16405 SH05_16415 SH05_RS16405 3306268 3306843 - RpoE-regulated lipoprotein gene gene3272 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16405 SH05_RS16410 SH05_16420 SH05_RS16410 3306904 3307353 - hypothetical protein gene gene3273 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16410 SH05_RS16415 SH05_16425 SH05_RS16415 3307340 3307765 - acetyltransferase YpeA gene gene3274 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16415 SH05_RS16420 SH05_16430 SH05_RS16420 3307979 3308848 + N-acetylmuramoyl-L-alanine amidase gene gene3275 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16420 SH05_RS16425 SH05_16435 SH05_RS16425 3308852 3309751 + coproporphyrinogen III oxidase catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis gene gene3276 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16425 SH05_RS16430 SH05_16440 SH05_RS16430 3309757 3310809 - transcriptional regulator activates the transcription of the ethanolamine utilization operon gene gene3277 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16430 SH05_RS16435 SH05_16445 SH05_RS16435 3310855 3311355 - ethanolamine utilization protein EutK ethanolamine utilization protein%3B involved in the degredation of ethanolamine gene gene3278 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16435 SH05_RS16440 SH05_16450 SH05_RS16440 3311368 3312027 - ethanolamine utilization protein EutL carboxysome structural protein involved in ethanolamine utilization gene gene3279 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16440 SH05_RS16445 SH05_16455 SH05_RS16445 3312037 3312924 - ethanolamine ammonia-lyase light chain catalyzes the formation of acetaldehyde from ethanolamine gene gene3280 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16445 SH05_RS16450 SH05_16460 SH05_RS16450 3312945 3314306 - ethanolamine ammonia-lyase heavy chain with EutC catalyzes the formation of acetaldehyde and ammonia from ethanolamine gene gene3281 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16450 SH05_RS16455 SH05_16465 eutA eutA 3314318 3315721 - ethanolamine utilization protein EutA ethanolamine utilization protein EutA gene gene3282 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16455 SH05_RS16460 SH05_16470 SH05_RS16460 3315718 3316944 - ethanolamine utilization protein EutH may be involved in the transport of ethanolamine gene gene3283 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16460 SH05_RS16465 SH05_16475 SH05_RS16465 3317161 3318348 - ethanolamine utilization protein EutG aldehyde reductase%3B catalyzes the conversion of acetaldehyde to ethanol gene gene3284 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16465 SH05_RS16470 SH05_16480 SH05_RS16470 3318338 3319174 - ethanolamine utilization protein EutJ possible chaperonin%3B may be involved in the assembly of the carboxysome gene gene3285 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16470 SH05_RS16475 SH05_16485 SH05_RS16475 3319185 3320588 - ethanolamine utilization protein EutE ethanolamine utilization protein%3B catalyzes the formation of acetyl-CoA from acetaldehyde gene gene3286 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16475 SH05_RS16480 SH05_16490 SH05_RS16480 3320600 3320887 - ethanolamine utilization protein EutN gene gene3287 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16480 SH05_RS16485 SH05_16495 SH05_RS16485 3320994 3321287 - ethanolamine utilization protein EutM ethanolamine utilization protein%3B involved in the degredation of ethanolamine gene gene3288 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16485 SH05_RS16490 SH05_16500 SH05_RS16490 3321326 3322342 - ethanolamine utilization protein EutD gene gene3289 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16490 SH05_RS16495 SH05_16505 SH05_RS16495 3322339 3323142 - ethanolamine utilization cobalamin adenosyltransferase catalyzes the conversion of cob(I)yrinic acid a%2Cc-diamide to adenosylcob(III)yrinic acid a%2Cc-diamide gene gene3290 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16495 SH05_RS16500 SH05_16510 SH05_RS16500 3323139 3323840 - ethanolamine utilization protein EutQ gene gene3291 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16500 SH05_RS16505 SH05_16515 SH05_RS16505 3323815 3324294 - ethanolamine utilization protein EutP gene gene3292 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16505 SH05_RS16510 SH05_16520 SH05_RS16510 3324307 3324642 - ethanolamine utilization protein EutS ethanolamine utilization protein%3B involved in the degredation of ethanolamine gene gene3293 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16510 SH05_RS16515 SH05_16525 SH05_RS16515 3324935 3327214 - NADP-dependent malic enzyme NADP-dependent%3B catalyzes the oxidative decarboxylation of malate to form pyruvate%3B decarboxylates oxaloacetate gene gene3294 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16515 SH05_RS16520 SH05_16530 SH05_RS16520 3327503 3328453 + transaldolase A gene gene3295 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16520 SH05_RS16525 SH05_16535 SH05_RS16525 3328473 3330476 + transketolase catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase gene gene3296 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16525 SH05_RS16530 SH05_16540 SH05_RS16530 3330571 3331614 - DUF1176 domain-containing protein gene gene3297 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16530 SH05_RS16535 SH05_16545 SH05_RS16535 3331740 3332315 - GDP-mannose pyrophosphatase NudK gene gene3298 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16535 SH05_RS16540 SH05_16550 SH05_RS16540 3332383 3334362 - protein AegA unknown function%3B in E. coli the aegA gene is regulated by Fnr%2C NarXL%2C and NarQ (but not ArcA)%2C induced under anaerobic conditions and repressed in the presence of nitrate (anaerobic) gene gene3299 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16540 SH05_RS16545 SH05_16555 SH05_RS16545 3334568 3336268 + nitrate/nitrite two-component system sensor histidine kinase gene gene3300 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16545 SH05_RS16550 SH05_16560 SH05_RS16550 3336432 3339545 + multidrug efflux RND transporter permease subunit gene gene3301 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16550 SH05_RS16555 SH05_16565 SH05_RS16555 3339632 3339811 + hypothetical protein gene gene3302 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16555 SH05_RS16560 SH05_16570 SH05_RS16560 3340084 3340440 + hypothetical protein gene gene3303 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16560 SH05_RS16565 SH05_16575 SH05_RS16565 3340444 3341571 + succinyl-diaminopimelate desuccinylase gene gene3304 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16565 SH05_RS16570 SH05_16580 SH05_RS16570 3341599 3341799 + membrane protein gene gene3305 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16570 SH05_RS16575 SH05_16585 SH05_RS16575 3341909 3342607 - esterase gene gene3306 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16575 SH05_RS16580 SH05_16590 SH05_RS16580 3342681 3344696 - tRNA(Met) cytidine acetyltransferase TmcA cetylates the wobble base C34 of the elongation-specific methionine tRNA gene gene3307 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16580 SH05_RS16585 SH05_16595 SH05_RS16585 3344711 3345574 - hypothetical protein gene gene3308 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16585 SH05_RS16590 SH05_16600 SH05_RS16590 3345742 3346455 - phosphoribosylaminoimidazole-succinocarboxamide synthase catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis%3B SAICAR synthase gene gene3309 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16590 SH05_RS16595 SH05_16605 SH05_RS16595 3346527 3346757 + hypothetical protein gene gene3310 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16595 SH05_RS16600 SH05_16610 SH05_RS16600 3346668 3347702 - outer membrane protein assembly factor BamC gene gene3311 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16600 SH05_RS16605 SH05_16615 SH05_RS16605 3347719 3348597 - 4-hydroxy-tetrahydrodipicolinate synthase gene gene3312 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16605 SH05_RS16610 SH05_16620 gcvR gcvR 3348743 3349315 + glycine cleavage system transcriptional regulator negative transcriptional regulator of the gcvTHP operon gene gene3313 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16610 SH05_RS16615 SH05_16625 bcp bcp 3349315 3349785 + peroxiredoxin bacterioferritin comigratory protein%3B thiol peroxidase%3B thioredoxin-dependent%3B hydroperoxide peroxidase%3B in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide%3B contains an active site cysteine gene gene3314 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16615 SH05_RS16620 SH05_16630 SH05_RS16620 3350038 3350655 + hydrogenase-4 component A gene gene3315 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16620 SH05_RS16625 SH05_16635 SH05_RS16625 3350655 3352673 + hydrogenase-4 component B gene gene3316 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16625 SH05_RS16630 SH05_16640 hycD hycD 3352684 3353631 + hydrogenase-4 component C formate hydrogenlyase subunit 4%3B HycBCDEFG is part of the formate hydrogenlyase system which is involved in the cleaving of formate to dihydrogen and carbon dioxide gene gene3317 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16630 SH05_RS16635 SH05_16645 SH05_RS16635 3353648 3355087 + hydrogenase-4 component D gene gene3318 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16635 SH05_RS16640 SH05_16650 hyfE hyfE 3355099 3355749 + hydrogenase-4 component E interacts with formate dehydrogenase to produce an active formate hydrogenlyase complex which cleaves formate to dihydrogen and carbon dioxide gene gene3319 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16640 SH05_RS16645 SH05_16655 SH05_RS16645 3355754 3357334 + hydrogenase-4 component F gene gene3320 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16645 SH05_RS16650 SH05_16660 SH05_RS16650 3357324 3358991 + hydrogenase-4 component G gene gene3321 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16650 SH05_RS16655 SH05_16665 SH05_RS16655 3359001 3359546 + hydrogenase-4 component H electron transfer protein for hydrogenase-3%3B the formate hydrogenlyase complex comprises of a formate dehydrogenase%2C unidentified electron carriers and hydrogenase-3%3B in this non-energy conserving pathway%2C molecular hydrogen and carbodioxide are released from formate gene gene3322 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16655 SH05_RS16660 SH05_16670 SH05_RS16660 3359543 3360301 + hydrogenase-4 component I gene gene3323 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16660 SH05_RS16665 SH05_16675 SH05_RS16665 3360294 3360707 + hydrogenase-4 component J gene gene3324 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16665 SH05_RS16670 SH05_16680 SH05_RS16670 3360737 3362749 + hydrogenase-4 transcriptional activator gene gene3325 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16670 SH05_RS16675 SH05_16685 SH05_RS16675 3362771 3363619 + formate transporter gene gene3326 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16675 SH05_RS16680 SH05_16690 SH05_RS16680 3363657 3364718 - permease gene gene3327 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16680 SH05_RS16685 SH05_16695 SH05_RS16685 3364931 3366394 + beta-barrel assembly-enhancing protease gene gene3328 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16685 SH05_RS16690 SH05_16700 SH05_RS16690 3366415 3366774 + oxidoreductase gene gene3329 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16690 SH05_RS16695 SH05_16705 SH05_RS16695 3366912 3367589 - DnaA regulatory inactivator Hda controls initiation of DNA replication by inhibiting re-initiation of replication%2C promotes hydrolysis of DnaA-bound ATP gene gene3330 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16695 SH05_RS16700 SH05_16710 SH05_RS16700 3367708 3368997 - uracil permease gene gene3331 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16700 SH05_RS16705 SH05_16715 upp upp 3369083 3369709 - uracil phosphoribosyltransferase Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate gene gene3332 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16705 SH05_RS16710 SH05_16720 SH05_RS16710 3370034 3371071 + phosphoribosylformylglycinamidine cyclo-ligase catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis gene gene3333 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16710 SH05_RS16715 SH05_16725 purN purN 3371071 3371709 + phosphoribosylglycinamide formyltransferase glycinamide ribonucleotide transformylase%3B GAR Tfase%3B catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate%3B PurN requires formyl folate for the reaction unlike PurT which uses formate gene gene3334 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16715 SH05_RS16720 SH05_16730 SH05_RS16720 3371881 3373947 + polyphosphate kinase gene gene3335 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16720 SH05_RS16725 SH05_16735 SH05_RS16725 3373952 3375493 + exopolyphosphatase gene gene3336 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16725 SH05_RS16730 SH05_16740 SH05_RS16730 3375532 3377775 - cyclic di-GMP phosphodiesterase YfgF gene gene3337 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16730 SH05_RS16735 SH05_16745 SH05_RS16735 3377957 3378109 - hypothetical protein gene gene3338 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16735 SH05_RS16740 SH05_16750 SH05_RS16740 3378127 3378318 + hypothetical protein gene gene3339 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16740 SH05_RS16745 SH05_16755 SH05_RS16745 3378632 3379147 + membrane protein gene gene3340 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16745 SH05_RS16750 SH05_16760 SH05_RS16750 3379163 3379702 + hypothetical protein gene gene3341 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16750 SH05_RS16755 SH05_16765 guaA guaA 3379795 3381372 - GMP synthase [glutamine-hydrolyzing] contains glutamine-hydrolyzing domain and glutamine amidotransferase%3B GMP-binding domain%3B functions to produce GMP from XMP in the IMP pathway gene gene3342 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16755 SH05_RS16760 SH05_16770 SH05_RS16760 3381441 3382907 - inosine-5-monophosphate dehydrogenase gene gene3343 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16760 SH05_RS16765 SH05_16775 xseA xseA 3383069 3384439 + exodeoxyribonuclease 7 large subunit bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides gene gene3344 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16765 SH05_RS16770 SH05_16780 SH05_RS16770 3384436 3384651 - DUF1407 domain-containing protein gene gene3345 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16770 SH05_RS16775 SH05_16785 SH05_RS16775 3384721 3386193 - GTPase Der gene gene3346 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16775 SH05_RS16780 SH05_16790 SH05_RS16780 3386311 3387489 - outer membrane protein assembly factor BamB gene gene3347 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16780 SH05_RS16785 SH05_16795 SH05_RS16785 3387500 3388120 - ancillary SecYEG translocon subunit gene gene3348 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16785 SH05_RS16790 SH05_16800 hisS hisS 3388138 3389412 - histidine--tRNA ligase catalyzes a two-step reaction%2C first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B class II aminoacyl-tRNA synthetase%3B forms homodimers%3B some organisms have a paralogous gene%2C hisZ%2C that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG gene gene3349 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16790 SH05_RS16795 SH05_16805 SH05_RS16795 3389523 3390641 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) gene gene3350 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16795 SH05_RS16800 SH05_16810 SH05_RS16800 3390668 3391681 - cytoskeleton protein RodZ gene gene3351 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16800 SH05_RS16805 SH05_16815 SH05_RS16805 3391966 3393120 - 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN 23S rRNA m2A2503 methyltransferase%3B methylates the C2 position of the A2530 nucleotide in 23S rRNA%3B may be involved in antibiotic resistance gene gene3352 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16805 SH05_RS16810 SH05_16820 SH05_RS16810 3393270 3393701 - nucleoside diphosphate kinase catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate gene gene3353 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16810 SH05_RS16815 SH05_16825 SH05_RS16815 3393850 3396162 - penicillin-binding protein 1C penicillin-insensitive transglycosylase/transpeptidase gene gene3354 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16815 SH05_RS16820 SH05_16830 SH05_RS16820 3396163 3401124 - hypothetical protein gene gene3355 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16820 SH05_RS16825 SH05_16835 sseA sseA 3401331 3402176 + 3-mercaptopyruvate sulfurtransferase catalyzes the transfer of a sulfur ion to cyanide or to other thiol compounds gene gene3356 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16825 SH05_RS16830 SH05_16840 SH05_RS16830 3402994 3403770 - protein SseB enhances serine sensitivity caused by inhibition of homoserine dehydrogenase I gene gene3357 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16830 SH05_RS16835 SH05_16845 SH05_RS16835 3403912 3405195 - peptidase B catalyzes the removal of an N-terminal amino acid from a peptide or arylamide gene gene3358 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16835 SH05_RS16840 SH05_16850 SH05_RS16840 3405373 3405573 - protein IscX gene gene3359 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16840 SH05_RS16845 SH05_16855 SH05_RS16845 3405585 3405920 - (2Fe-2S) ferredoxin gene gene3360 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16845 SH05_RS16850 SH05_16860 hscA hscA 3405922 3407772 - chaperone protein HscA involved in the maturation of iron-sulfur cluster-containing proteins gene gene3361 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16850 SH05_RS16855 SH05_16865 hscB hscB 3407789 3408304 - co-chaperone protein HscB J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone%3B may function in biogenesis of iron-sulfur proteins gene gene3362 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16855 SH05_RS16860 SH05_16870 iscA iscA 3408400 3408723 - iron-binding protein forms iron-sulfur clusters of ferredoxin [2FE-2S]%3B binds iron in the presence of the thioredoxin reductase system%3B forms homodimers and tetramers%3B similar to SufA protein gene gene3363 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16860 SH05_RS16865 SH05_16875 SH05_RS16865 3408740 3409126 - Fe-S cluster assembly scaffold IscU gene gene3364 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16865 SH05_RS16870 SH05_16880 SH05_RS16870 3409154 3410368 - cysteine desulfurase IscS catalyzes the removal of elemental sulfur from cysteine to produce alanine%3B involved in NAD biosynthesis gene gene3365 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16870 SH05_RS16875 SH05_16885 SH05_RS16875 3410480 3410968 - Fe-S cluster assembly transcriptional regulator IscR regulates the expression of the iscRSUA operon gene gene3366 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16875 SH05_RS16880 SH05_16890 SH05_RS16880 3411420 3412160 - tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ catalyzes the fromation of 2'O-methylated cytidine or 2'O-methylated uridine at position 32 in tRNA gene gene3367 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16880 SH05_RS16885 SH05_16895 SH05_RS16885 3412279 3413082 + inositol-1-monophosphatase gene gene3368 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16885 SH05_RS16890 SH05_16900 SH05_RS16890 3413227 3414081 + S9 family prolyl oligopeptidase gene gene3369 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16890 SH05_RS16895 SH05_16905 SH05_RS16895 3414272 3415552 + stationary phase-inducible protein CsiE gene gene3370 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16895 SH05_RS16900 SH05_16910 SH05_RS16900 3415544 3416683 - 3-phenylpropionic acid transporter transporter of 3-phenylpropionate across the inner membrane%3B member of the major facilitator superfamily of transporters gene gene3371 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16900 SH05_RS16905 SH05_16915 SH05_RS16905 3416843 3417733 - Hca operon transcriptional activator HcaR activator of 3-phenylpropionic acid catabolism gene gene3372 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16905 SH05_RS16910 SH05_16920 SH05_RS16910 3417869 3419230 + 3-phenylpropionate/cinnamic acid dioxygenase subunit alpha gene gene3373 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16910 SH05_RS16915 SH05_16925 SH05_RS16915 3419227 3419745 + 3-phenylpropionate/cinnamic acid dioxygenase subunit beta gene gene3374 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16915 SH05_RS16920 SH05_16930 SH05_RS16920 3419745 3420065 + 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit gene gene3375 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16920 SH05_RS16925 SH05_16935 SH05_RS16925 3420062 3420874 + 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase Converts cis-3-(3-carboxyethyl)-3%2C5-cyclohexadiene-1%2C2-diol (PP-dihydrodiol) into 3-(2%2C3-dihydroxylphenyl)propionate gene gene3376 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16925 SH05_RS16930 SH05_16940 SH05_RS16930 3420884 3422086 + 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin--NAD+ reductase component gene gene3377 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16930 SH05_RS16935 SH05_16945 SH05_RS16935 3422183 3422605 + hypothetical protein gene gene3378 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16935 SH05_RS16940 SH05_16950 SH05_RS16940 3422653 3423525 - mutarotase superfamily protein%2C YphB family gene gene3379 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16940 SH05_RS16945 SH05_16955 SH05_RS16945 3423537 3424598 - Zn-dependent NAD(P)-binding oxidoreductase gene gene3380 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16945 SH05_RS16950 SH05_16960 SH05_RS16950 3424664 3425662 - ABC transporter permease gene gene3381 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16950 SH05_RS16955 SH05_16965 SH05_RS16955 3425687 3427198 - sugar ABC transporter ATPase gene gene3382 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16955 SH05_RS16960 SH05_16970 SH05_RS16960 3427221 3428204 - ABC transporter substrate-binding protein gene gene3383 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16960 SH05_RS16965 SH05_16975 SH05_RS16965 3428301 3431582 - DUF4380 domain-containing protein gene gene3384 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16965 SH05_RS16970 SH05_16980 SH05_RS16970 3431700 3432893 + transcriptional regulator gene gene3385 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16970 SH05_RS16975 SH05_16985 SH05_RS16975 3433091 3434344 - serine hydroxymethyltransferase gene gene3386 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16975 SH05_RS16980 SH05_16990 SH05_RS16980 3434672 3435862 + flavohemoprotein flavohemoprotein%3B catalyzes the formation of nitrate from nitric oxide%3B can also catalyze the reduction of dihydropteridine gene gene3387 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16980 SH05_RS16985 SH05_16995 SH05_RS16985 3435907 3436245 - nitrogen regulatory protein P-II 1 indirectly regulates nitrogen metabolism%3B at high nitrogen levels P-II prevents the phosphorylation of NR-I%2C the transcriptional activator of the glutamine synthetase gene (glnA)%3B at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA gene gene3388 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16985 SH05_RS16990 SH05_17000 SH05_RS16990 3436306 3437640 - transcriptional regulator with GlrK is part of a two-component signal transduction system regulating glmY gene gene3389 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16990 SH05_RS16995 SH05_17005 SH05_RS16995 3437630 3438343 - quorum-sensing regulator protein G gene gene3390 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS16995 SH05_RS17000 SH05_17010 SH05_RS17000 3438508 3439935 - two-component system sensor histidine kinase part of the GlrKR two-component signal transduction system involved in the regulation of glmY gene gene3391 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17000 SH05_RS17005 SH05_17015 SH05_RS17005 3440493 3444380 - phosphoribosylformylglycinamidine synthase catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis gene gene3392 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17005 SH05_RS17010 SH05_17020 SH05_RS17010 3444638 3446194 + murein transglycosylase gene gene3393 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17010 SH05_RS17015 SH05_17025 SH05_RS17015 3446191 3446694 - tRNA-specific adenosine deaminase gene gene3394 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17015 SH05_RS17020 SH05_17030 SH05_RS17020 3446752 3447387 - phosphatidylglycerophosphatase C gene gene3395 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17020 SH05_RS17025 SH05_17035 SH05_RS17025 3447596 3448444 + transcriptional regulator gene gene3396 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17025 SH05_RS17030 SH05_17040 SH05_RS17030 3448500 3448760 + 4Fe-4S binding protein gene gene3397 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17030 SH05_RS17035 SH05_17045 SH05_RS17035 3448954 3449034 - small toxic protein ShoB gene gene3398 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17035 SH05_RS17040 SH05_17050 SH05_RS17040 3449031 3449183 - hypothetical protein gene gene3399 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17040 SH05_RS17045 SH05_RS17045 SH05_RS17045 3449220 3449348 + glutamate decarboxylase gene gene3400 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17045 SH05_RS17050 SH05_17060 acpS acpS 3449455 3449835 - holo-ACP synthase Catalyzes the formation of holo-ACP%2C which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids gene gene3401 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17050 SH05_RS17055 SH05_17065 SH05_RS17055 3449835 3450566 - pyridoxine 5'-phosphate synthase involved in the de novo synthesis of pyridoxine (Vitamin B6) gene gene3402 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17055 SH05_RS17060 SH05_17070 recO recO 3450578 3451306 - DNA repair protein RecO involved in DNA repair and RecFOR pathway recombination%3B RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA gene gene3403 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17060 SH05_RS17065 SH05_17075 SH05_RS17065 3451318 3452223 - GTPase Era gene gene3404 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17065 SH05_RS17070 SH05_17080 rnc rnc 3452220 3452900 - ribonuclease 3 cytoplasmic enzyme involved in processing rRNA and some mRNAs%3B substrates typically have dsRNA regions%3B forms a homodimer%3B have N-terminal nuclease and C-terminal RNA-binding domains%3B requires magnesium as preferred ion for activity gene gene3405 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17070 SH05_RS17075 SH05_17085 SH05_RS17075 3453172 3454146 - signal peptidase I catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins gene gene3406 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17075 SH05_RS17080 SH05_17090 SH05_RS17080 3454162 3455961 - elongation factor 4 gene gene3407 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17080 SH05_RS17085 SH05_17095 SH05_RS17085 3456159 3456638 - protein RseC involved in the reduction of the SoxR iron-sulfur cluster gene gene3408 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17085 SH05_RS17090 SH05_17100 rseB rseB 3456635 3457591 - sigma-E factor regulatory protein RseB periplasmic protein%3B interacts with the C-terminal domain of RseA and stimulates RseA binding to sigmaE via the cytoplasmic RseA N-terminal domain which then sequesters sigmaE in the membrane thereby preventing sigmaE associated with core RNAP gene gene3409 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17090 SH05_RS17095 SH05_17105 SH05_RS17095 3457591 3458241 - anti-sigma-E factor RseA gene gene3410 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17095 SH05_RS17100 SH05_17110 SH05_RS17100 3458274 3458849 - ECF RNA polymerase sigma-E factor Member of the extracytoplasmic function sigma factors which are active under specific conditions%3B binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription%3B this sigma factor is involved in heat shock and oxidative stress response gene gene3411 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17100 SH05_RS17105 SH05_17115 SH05_RS17105 3458846 3459001 - hypothetical protein gene gene3412 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17105 SH05_RS17110 SH05_17120 SH05_RS17110 3459257 3460879 + L-aspartate oxidase catalyzes the formation of oxaloacetate from L-aspartate gene gene3413 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17110 SH05_RS17115 SH05_17125 SH05_RS17115 3460864 3461601 - tRNA1(Val) (adenine(37)-N6)-methyltransferase gene gene3414 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17115 SH05_RS17120 SH05_17130 SH05_RS17120 3461733 3463067 + ATP-dependent RNA helicase SrmB facilitates an early step in the assembly of the 50S subunit of the ribosome gene gene3415 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17120 SH05_RS17125 SH05_17135 SH05_RS17125 3463073 3463225 + hypothetical protein gene gene3416 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17125 SH05_RS17130 SH05_17140 SH05_RS17130 3463276 3464157 - transcriptional regulator gene gene3417 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17130 SH05_RS17135 SH05_17145 SH05_RS17135 3464260 3464847 + cysteine/O-acetylserine efflux protein gene gene3418 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17135 SH05_RS17140 SH05_17150 SH05_RS17140 3464903 3465286 - autonomous glycyl radical cofactor GrcA stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit gene gene3419 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17140 SH05_RS17145 SH05_17155 SH05_RS17145 3465591 3466280 + uracil-DNA glycosylase Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine gene gene3420 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17145 SH05_RS17150 SH05_17160 SH05_RS17150 3466328 3467365 - methyltransferase gene gene3421 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17150 SH05_RS17155 SH05_17165 SH05_RS17155 3467355 3467513 - hypothetical protein gene gene3422 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17155 SH05_RS17160 SH05_17170 SH05_RS17160 3467572 3467991 + thioredoxin gene gene3423 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17160 SH05_RS17165 SH05_17175 SH05_RS17165 3468060 3468758 + DTW domain-containing protein YfiP gene gene3424 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17165 SH05_RS17170 SH05_17180 SH05_RS17170 3468790 3471450 + protein lysine acetyltransferase Pka catalyzes the acetylation of lysine gene gene3425 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17170 SH05_RS17175 SH05_17185 pssA pssA 3471564 3472919 + CDP-diacylglycerol--serine O-phosphatidyltransferase catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine%3B bounds to the ribosome gene gene3426 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17175 SH05_RS17180 SH05_17190 SH05_RS17180 3473016 3473288 + lipoprotein gene gene3427 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17180 SH05_RS17185 SH05_17195 SH05_RS17185 3473285 3474583 - alpha-ketoglutarate permease gene gene3428 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17185 SH05_RS17190 SH05_RS17190 SH05_RS17190 3474699 3474899 - hypothetical protein gene gene3429 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17190 SH05_RS17195 SH05_17205 SH05_RS17195 3474908 3475023 - 5S ribosomal RNA rRNA gene3430 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17195 SH05_RS17200 SH05_17210 SH05_RS17200 3475101 3478030 - 23S ribosomal RNA rRNA gene3431 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17200 SH05_RS17205 SH05_17215 SH05_RS17205 3478206 3478281 - tRNA-Glu tRNA gene3432 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17205 SH05_RS17210 SH05_17220 SH05_RS17210 3478441 3479996 - 16S ribosomal RNA rRNA gene3433 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17210 SH05_RS17215 SH05_17225 SH05_RS17215 3480437 3483010 - chaperone protein ClpB gene gene3434 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17215 SH05_RS17220 SH05_17230 SH05_RS17220 3483140 3483871 - Laccase YfiH gene gene3435 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17220 SH05_RS17225 SH05_17235 rluD rluD 3483868 3484848 - ribosomal large subunit pseudouridine synthase D responsible for synthesis of pseudouridine from uracil at positions 1911%2C 1915 and 1917 in 23S ribosomal RNA gene gene3436 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17225 SH05_RS17230 SH05_17240 SH05_RS17230 3484983 3485720 + outer membrane protein assembly factor BamD gene gene3437 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17230 SH05_RS17235 SH05_17245 SH05_RS17235 3485750 3485956 + hypothetical protein gene gene3438 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17235 SH05_RS17240 SH05_17250 SH05_RS17240 3485991 3486332 + ribosome-associated inhibitor A associated with 30S ribosomal subunit%3B interferes with translation elongation gene gene3439 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17240 SH05_RS17245 SH05_17255 pheA pheA 3486582 3487742 + P-protein catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis gene gene3440 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17245 SH05_RS17250 SH05_17260 tyrA tyrA 3487785 3488906 - T-protein catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis gene gene3441 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17250 SH05_RS17255 SH05_17265 SH05_RS17255 3488917 3489987 - phospho-2-dehydro-3-deoxyheptonate aldolase Tyr-sensitive catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C tyrosine sensitive gene gene3442 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17255 SH05_RS17260 SH05_17270 SH05_RS17260 3490197 3490562 + lipoprotein gene gene3443 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17260 SH05_RS17265 SH05_17275 SH05_RS17265 3490712 3491230 + hypothetical protein gene gene3444 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17265 SH05_RS17270 SH05_17280 SH05_RS17270 3491223 3492446 + diguanylate cyclase gene gene3445 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17270 SH05_RS17275 SH05_17285 SH05_RS17275 3492462 3492944 + OM lipoprotein positive effector of YfiN activity gene gene3446 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17275 SH05_RS17280 SH05_17290 SH05_RS17280 3493020 3493367 - 50S ribosomal protein L19 gene gene3447 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17280 SH05_RS17285 SH05_17295 trmD trmD 3493409 3494176 - tRNA (guanine-N(1)-)-methyltransferase methylates guanosine-37 in various tRNAs%3B uses S-adenosyl-L-methionine to transfer methyl group to tRNA gene gene3448 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17285 SH05_RS17290 SH05_17300 rimM rimM 3494207 3494755 - ribosome maturation factor RimM Essential for efficient processing of 16S rRNA gene gene3449 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17290 SH05_RS17295 SH05_17305 SH05_RS17295 3494774 3495022 - 30S ribosomal protein S16 gene gene3450 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17295 SH05_RS17300 SH05_17310 SH05_RS17300 3495271 3496632 - signal recognition particle protein gene gene3451 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17300 SH05_RS17305 SH05_17315 SH05_RS17305 3496799 3497590 + hypothetical protein gene gene3452 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17305 SH05_RS17310 SH05_17320 SH05_RS17310 3497656 3498897 + membrane protein gene gene3453 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17310 SH05_RS17315 SH05_17325 SH05_RS17315 3498952 3499545 - protein GrpE with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins%3B may act as a thermosensor gene gene3454 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17315 SH05_RS17320 SH05_17330 SH05_RS17320 3499542 3499706 - heat-shock protein gene gene3455 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17320 SH05_RS17325 SH05_17335 ppnK ppnK 3499668 3500546 + NAD kinase catalyzes the phosphorylation of NAD to NADP gene gene3456 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17325 SH05_RS17330 SH05_17340 SH05_RS17330 3500632 3502293 + DNA repair protein RecN gene gene3457 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17330 SH05_RS17335 SH05_17345 SH05_RS17335 3502442 3502783 + outer membrane protein assembly factor BamE gene gene3458 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17335 SH05_RS17340 SH05_17350 SH05_RS17340 3502845 3503135 - hypothetical protein gene gene3459 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17340 SH05_RS17345 SH05_17355 SH05_RS17345 3503125 3503601 - ribosome association toxin RatA gene gene3460 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17345 SH05_RS17350 SH05_17360 smpB smpB 3503733 3504215 + SsrA-binding protein binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes%3B also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site%3B SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus%3B both the tmRNA and SmpB are regulated in cell cycle-dependent manner%3B functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation gene gene3461 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17350 SH05_RS17355 SH05_17365 SH05_RS17355 3504996 3506237 + integrase gene gene3462 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17355 SH05_RS17360 SH05_17370 SH05_RS17360 3506481 3507356 - hypothetical protein gene gene3463 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17360 SH05_RS17365 SH05_17375 SH05_RS17365 3507481 3507693 + regulator AlpA gene gene3464 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17365 SH05_RS17370 SH05_17380 SH05_RS17370 3507822 3509231 + hypothetical protein gene gene3465 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17370 SH05_RS17375 SH05_17385 SH05_RS17375 3509384 3510010 + hypothetical protein gene gene3466 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17375 SH05_RS17380 SH05_17390 SH05_RS17380 3510188 3512377 - DEAD/DEAH box helicase gene gene3467 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17380 SH05_RS17385 SH05_17395 SH05_RS17385 3512374 3513990 - CP4-57 defective prophage%2C DUF4297/DUF1837 polymorphic toxin family protein gene gene3468 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17385 SH05_RS17390 SH05_17400 SH05_RS17390 3514350 3514613 - hypothetical protein gene gene3469 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17390 SH05_RS17395 SH05_17405 SH05_RS17395 3514755 3515828 + mRNA endoribonuclease LS gene gene3470 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17395 SH05_RS17400 SH05_17410 SH05_RS17400 3515821 3516192 + antitoxin RnlB gene gene3471 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17400 SH05_RS17405 SH05_17415 SH05_RS17405 3516547 3517410 + hypothetical protein gene gene3472 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17405 SH05_RS17410 SH05_17420 SH05_RS17410 3517502 3518323 + UPF0380 protein YfjQ gene gene3473 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17410 SH05_RS17415 SH05_17425 SH05_RS17415 3518540 3519241 + transcriptional regulator gene gene3474 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17415 SH05_RS17420 SH05_17430 SH05_RS17420 3519282 3519518 + hypothetical protein gene gene3475 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17420 SH05_RS17425 SH05_17435 SH05_RS17425 3519518 3519961 + hypothetical protein gene gene3476 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17425 SH05_RS17430 SH05_17440 SH05_RS17430 3519985 3520452 + periplasmic protein gene gene3477 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17430 SH05_RS17435 SH05_17445 SH05_RS17435 3520677 3520991 - arsenate reductase gene gene3478 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17435 SH05_RS17440 SH05_RS17440 SH05_RS17440 3521004 3522019 - arsenic transporter gene gene3479 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17440 SH05_RS17445 SH05_17455 SH05_RS17445 3522155 3523858 + hypothetical protein gene gene3480 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17445 SH05_RS17450 SH05_17460 SH05_RS17450 3524756 3525214 + antirestriction protein gene gene3481 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17450 SH05_RS17455 SH05_17465 SH05_RS17455 3525223 3525705 + DNA repair protein gene gene3482 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17455 SH05_RS17460 SH05_17470 SH05_RS17460 3525952 3526269 + hypothetical protein gene gene3483 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17460 SH05_RS17465 SH05_17475 SH05_RS17465 3526290 3526619 + toxin YpjF gene gene3484 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17465 SH05_RS17470 SH05_17480 SH05_RS17470 3526983 3527195 - ATPase gene gene3485 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17470 SH05_RS17480 SH05_17490 SH05_RS17480 3531902 3532045 - DNA invertase gene gene3486 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17480 SH05_RS17485 SH05_17495 SH05_RS17485 3532475 3533218 - hypothetical protein gene gene3487 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17485 SH05_RS17490 SH05_17500 SH05_RS17490 3533366 3533848 - hypothetical protein gene gene3488 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17490 SH05_RS17500 SH05_17510 SH05_RS17500 3534599 3534674 - tRNA-Met tRNA gene3489 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17500 SH05_RS17505 SH05_17515 SH05_RS17505 3535585 3536271 + alpha-1%2C2-mannosidase gene gene3490 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17505 SH05_RS17510 SH05_17520 SH05_RS17510 3536284 3537075 + alpha-amylase gene gene3491 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17510 SH05_RS17515 SH05_17525 SH05_RS17515 3537214 3537486 + alpha-amylase gene gene3492 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17515 SH05_RS17520 SH05_17530 SH05_RS17520 3537822 3538799 + protein CsiD in Escherichia coli this gene is induced by carbon starvation and depends on sigma S and cAMP-CRP%3B the structure of the Gab protein shows it is a member of non-heme iron (II)-dependent oxygenase superfamily which includes clavamini acid synthases%3B forms homotetramers in solution gene gene3493 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17520 SH05_RS17525 SH05_17535 SH05_RS17525 3538819 3540087 + L-2-hydroxyglutarate oxidase LhgO catalyzed the formation of 2-ketoglutarate from 2-hydroxyglutarate gene gene3494 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17525 SH05_RS17530 SH05_17540 gabD gabD 3540110 3541558 + succinate-semialdehyde dehydrogenase [NADP+] catalyzes the formation of succinate from succinate semialdehyde%3B NADP dependent gene gene3495 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17530 SH05_RS17535 SH05_17545 SH05_RS17535 3541572 3542852 + 4-aminobutyrate aminotransferase GabT gene gene3496 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17535 SH05_RS17540 SH05_17550 SH05_RS17540 3543090 3544490 + GABA permease gene gene3497 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17540 SH05_RS17545 SH05_17555 SH05_RS17545 3544511 3545173 + transcriptional regulator regulator of gab gene expression gene gene3498 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17545 SH05_RS17550 SH05_17560 SH05_RS17550 3545174 3545623 - peptidoglycan-binding protein LysM gene gene3499 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17550 SH05_RS17555 SH05_17565 SH05_RS17555 3545707 3545865 - hypothetical protein gene gene3500 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17555 SH05_RS17560 SH05_17570 SH05_RS17560 3546048 3546347 + transcriptional regulator gene gene3501 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17560 SH05_RS17565 SH05_17575 SH05_RS17565 3546357 3546881 + hypothetical protein gene gene3502 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17565 SH05_RS17570 SH05_17580 SH05_RS17570 3546928 3547332 - DNA-binding protein StpA gene gene3503 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17570 SH05_RS17575 SH05_17585 SH05_RS17575 3548001 3548450 + L-alanine exporter AlaE gene gene3504 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17575 SH05_RS17580 SH05_17590 SH05_RS17580 3548487 3548831 - hypothetical protein gene gene3505 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17580 SH05_RS17585 SH05_17595 SH05_RS17585 3548983 3549312 + DUF883 domain-containing protein gene gene3506 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17585 SH05_RS17590 SH05_17600 SH05_RS17590 3549560 3549805 + glutaredoxin gene gene3507 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17590 SH05_RS17595 SH05_17605 nrdI nrdI 3549802 3550212 + protein NrdI in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF gene gene3508 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17595 SH05_RS17600 SH05_17610 SH05_RS17600 3550185 3552329 + ribonucleoside-diphosphate reductase 2 subunit alpha gene gene3509 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17600 SH05_RS17605 SH05_17615 SH05_RS17605 3552339 3553298 + ribonucleotide-diphosphate reductase subunit beta B2 or R2 protein%3B type 1b enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdE gene gene3510 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17605 SH05_RS17610 SH05_17620 SH05_RS17610 3553652 3554854 + glycine/betaine ABC transporter ATP-binding protein with ProWX is involved in the high-affinity uptake of glycine betaine gene gene3511 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17610 SH05_RS17615 SH05_17625 SH05_RS17615 3554847 3555911 + glycine/betaine ABC transporter permease with ProVX is involved in the high-affinity uptake of glycine betaine gene gene3512 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17615 SH05_RS17620 SH05_17630 proX proX 3555969 3556961 + glycine/betaine ABC transporter substrate-binding protein with ProVW%2C part of the high-affinity transport system for the osmoprotectant glycine betaine gene gene3513 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17620 SH05_RS17625 SH05_RS17625 SH05_RS17625 3557153 3558330 + transporter gene gene3514 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17625 SH05_RS17630 SH05_17640 SH05_RS17630 3558454 3559191 + hypothetical protein gene gene3515 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17630 SH05_RS17635 SH05_17645 SH05_RS17635 3559181 3559516 + L-valine exporter%2C norvaline resistance protein gene gene3516 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17635 SH05_RS17640 SH05_17650 SH05_RS17640 3559607 3560137 + transcriptional regulator DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux%3B negative regulator of the multidrug operon emrAB gene gene3517 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17640 SH05_RS17645 SH05_17655 SH05_RS17645 3560264 3561436 + multidrug export protein EmrA with ErmA and TolC forms a multidrug efflux system gene gene3518 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17645 SH05_RS17650 SH05_17660 emrB emrB 3561453 3562991 + multidrug effux MFS transporter subunit EmrB multidrug MFS transporte%3B with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid gene gene3519 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17650 SH05_RS17655 SH05_17665 SH05_RS17655 3563055 3563570 - S-ribosylhomocysteine lyase catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2 gene gene3520 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17655 SH05_RS17660 SH05_17670 SH05_RS17660 3563720 3565276 - glutamate--cysteine ligase involved in the first step of glutathione biosynthesis gene gene3521 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17660 SH05_RS17665 SH05_17675 SH05_RS17665 3565349 3565777 - hypothetical protein gene gene3522 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17665 SH05_RS17670 SH05_17680 SH05_RS17670 3565774 3566340 - fructose-1-phosphate phosphatase YqaB YqaB%3B catalyzes the dephosphorylation of fructose 1-phosphate%2C 6-phosphogluconate and p-nitrophenyl phosphate (pNPP)%3B presents beta-phosphoglucomutase activity at a lower extent gene gene3523 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17670 SH05_RS17680 SH05_17690 SH05_RS17680 3566621 3566697 - tRNA-Arg tRNA gene3524 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17680 SH05_RS17685 SH05_17695 SH05_RS17685 3566896 3566972 - tRNA-Arg tRNA gene3525 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17685 SH05_RS17690 SH05_17700 SH05_RS17690 3567035 3567111 - tRNA-Arg tRNA gene3526 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17690 SH05_RS17695 SH05_17705 SH05_RS17695 3567310 3567386 - tRNA-Arg tRNA gene3527 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17695 SH05_RS17700 SH05_17710 SH05_RS17700 3567390 3567482 - tRNA-Ser tRNA gene3528 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17700 SH05_RS17705 SH05_17715 SH05_RS17705 3567798 3567983 - pleiotropic regulatory protein for carbon source metabolism affects carbohydrate metabolism%3B has regulatory role in many processes gene gene3529 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17705 SH05_RS17710 SH05_17720 SH05_RS17710 3568218 3570848 - alanine--tRNA ligase gene gene3530 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17710 SH05_RS17715 SH05_17725 SH05_RS17715 3570786 3570935 + hypothetical protein gene gene3531 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17715 SH05_RS17720 SH05_17730 recX recX 3570976 3571476 - regulatory protein RecX binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities gene gene3532 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17720 SH05_RS17725 SH05_RS17725 SH05_RS17725 3571698 3571882 - cruciferin gene gene3533 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17725 SH05_RS17730 SH05_RS17730 SH05_RS17730 3572000 3572146 - hypothetical protein gene gene3534 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17730 SH05_RS17735 SH05_17750 SH05_RS17735 3572200 3572859 + chloramphenicol acetyltransferase CAT gene gene3535 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17735 SH05_RS17740 SH05_17755 SH05_RS17740 3573025 3573522 - nicotinamide-nucleotide amidohydrolase PncC gene gene3536 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17740 SH05_RS17745 SH05_17760 SH05_RS17745 3573667 3574752 - murein transglycosylase membrane-bound lytic murein transglycosylase B%3B catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan gene gene3537 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17745 SH05_RS17750 SH05_17765 srlA srlA 3575008 3575571 + glucitol/sorbitol permease IIC component catalyzes the phosphorylation of incoming sugar substrates along with their translocation across the cell membrane%3B the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site gene gene3538 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17750 SH05_RS17755 SH05_17770 srlE srlE 3575568 3576527 + glucitol/sorbitol-specific phosphotransferase enzyme IIB component catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIB transfers the phosphoryl group to the substrate gene gene3539 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17755 SH05_RS17760 SH05_17775 SH05_RS17760 3576538 3576909 + glucitol/sorbitol-specific phosphotransferase enzyme IIA component phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel gene gene3540 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17760 SH05_RS17765 SH05_17780 SH05_RS17765 3576913 3577692 + sorbitol-6-phosphate 2-dehydrogenase catalyzes the conversion of sorbitol 6-phosphate into fructose 6-phosphate gene gene3541 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17765 SH05_RS17770 SH05_17785 SH05_RS17770 3577797 3578156 + glucitol operon activator protein regulator for glucitol utilization gene gene3542 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17770 SH05_RS17775 SH05_17790 srlR srlR 3578223 3578996 + glucitol operon repressor regulates genes involved in glucitol utilization gene gene3543 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17775 SH05_RS17780 SH05_17795 SH05_RS17780 3578989 3579954 + arabinose 5-phosphate isomerase GutQ gene gene3544 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17780 SH05_RS17785 SH05_17800 SH05_RS17785 3579951 3581465 - NorR family transcriptional regulator Required for the expression of anaerobic nitric oxide (NO) reductase%3B acts as a transcriptional activator for the norVW operon gene gene3545 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17785 SH05_RS17790 SH05_17805 SH05_RS17790 3581652 3583091 + anaerobic nitric oxide reductase flavorubredoxin detoxifies nitric oxide using NADH gene gene3546 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17790 SH05_RS17795 SH05_17810 SH05_RS17795 3583088 3584221 + nitric oxide reductase FlRd-NAD+ reductase gene gene3547 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17795 SH05_RS17800 SH05_17815 SH05_RS17800 3584349 3586601 - hydrogenase maturation protein HypF carbamoyltransferase%3B involved in the formation of the cyanate group of hydrogenase%3B catalyzes the formation of carbamoyladenylate from carbamoylphosphate and then transfers the carbamoyl group to HypE gene gene3548 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17800 SH05_RS17805 SH05_17820 SH05_RS17805 3586754 3587281 - electron transporter HydN involved in electron transport from formate to hydrogen gene gene3549 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17805 SH05_RS17810 SH05_17825 SH05_RS17810 3587430 3588440 - transcriptional regulator gene gene3550 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17810 SH05_RS17815 SH05_17830 SH05_RS17815 3588700 3590157 + PTS arbutin-%2C cellobiose-%2C and salicin EIIBC component phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel gene gene3551 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17815 SH05_RS17820 SH05_17835 SH05_RS17820 3590166 3591590 + 6-phospho-beta-glucosidase gene gene3552 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17820 SH05_RS17825 SH05_17840 hycI hycI 3591749 3592219 - hydrogenase 3 maturation protease involved in the C-terminal processing of the large subunit of hydrogenase 3 HycE gene gene3553 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17825 SH05_RS17830 SH05_17845 SH05_RS17830 3592212 3592622 - formate hydrogenlyase maturation protein HycH required for the maturation of the formate hydrogenlyase complex gene gene3554 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17830 SH05_RS17835 SH05_17850 SH05_RS17835 3592619 3593386 - formate hydrogenlyase subunit 7 gene gene3555 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17835 SH05_RS17840 SH05_17855 SH05_RS17840 3593386 3593928 - formate hydrogenlyase subunit 6 electron transfer protein for hydrogenase-3%3B the formate hydrogenlyase complex comprises of a formate dehydrogenase%2C unidentified electron carriers and hydrogenase-3%3B in this non-energy conserving pathway%2C molecular hydrogen and carbodioxide are released from formate gene gene3556 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17840 SH05_RS17845 SH05_17860 hycE hycE 3593938 3595647 - formate hydrogenlyase subunit 5 formate hydrogenlyase subunit 5%3B HycBCDEFG is part of the formate hydrogenlyase system which is involved in the cleaving of formate to dihydrogen and carbon dioxide gene gene3557 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17845 SH05_RS17850 SH05_17865 hycD hycD 3595665 3596588 - formate hydrogenlyase subunit 4 formate hydrogenlyase subunit 4%3B HycBCDEFG is part of the formate hydrogenlyase system which is involved in the cleaving of formate to dihydrogen and carbon dioxide gene gene3558 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17850 SH05_RS17855 SH05_17870 SH05_RS17855 3596591 3598417 - formate hydrogenlyase subunit 3 catalyzes the oxidation of formate to carbon dioxide and molecular hydrogen%3B formate hydrogenlyase comprises of a formate dehydrogenase%2C unidentified electron carriers and a hydrogenase (subunit 3) gene gene3559 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17855 SH05_RS17860 SH05_17875 SH05_RS17860 3598414 3599025 - formate hydrogenlyase subunit 2 gene gene3560 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17860 SH05_RS17865 SH05_17880 SH05_RS17865 3598926 3599234 + hypothetical protein gene gene3561 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17865 SH05_RS17870 SH05_17885 SH05_RS17870 3599150 3599611 - formate hydrogenlyase regulatory protein HycA regulates several genes involved in the formate hydrogenlyase system%3B seems to prevent binding of FhlA transcriptional activator to the activator sequence of hyc operon gene gene3562 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17870 SH05_RS17875 SH05_17890 hypA hypA 3599823 3600173 + protein HypA plays a role in hydrogenase nickel cofactor insertion gene gene3563 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17875 SH05_RS17880 SH05_17895 SH05_RS17880 3600177 3601049 + hydrogenase isoenzymes nickel incorporation protein HypB GTP hydrolase involved in nickel liganding into hydrogenases gene gene3564 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17880 SH05_RS17885 SH05_17900 SH05_RS17885 3601040 3601312 + hydrogenase assembly protein HypC HypC%3B accessory protein necessary for maturation of the hydrogenase isoforms 1%2C 2 and 3%3B forms a complex with HypD%2C HypE%2C and HypF proteins%2C which is the site of ligand biosynthesis and attachment to the iron atom of the NiFe site in the hydrogenase gene gene3565 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17885 SH05_RS17890 SH05_17905 SH05_RS17890 3601312 3602433 + hydrogenase isoenzymes formation protein HypD necessary for the synthesis of all three hydrogenase isoenzymes gene gene3566 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17890 SH05_RS17895 SH05_17910 SH05_RS17895 3602430 3603440 + hydrogenase isoenzymes formation protein HypE hydrogenase isoenzymes formation protein%3B involved in the formation of the cyanate group of the large subunit of the hydrogenase%3B catalyzes the formation of thiocyanate from thiocarbamate gene gene3567 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17895 SH05_RS17900 SH05_17915 SH05_RS17900 3603514 3605592 + formate hydrogenlyase transcriptional activator regulates the expression of formate dehydrogenase H and hydrogenase-3 structural genes gene gene3568 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17900 SH05_RS17905 SH05_17920 SH05_RS17905 3605629 3605982 - hypothetical protein gene gene3569 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17905 SH05_RS17910 SH05_17925 SH05_RS17910 3606269 3608830 + DNA mismatch repair protein MutS This protein performs the mismatch recognition step during the DNA repair process gene gene3570 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17910 SH05_RS17915 SH05_17930 SH05_RS17915 3608936 3609592 + Serine/threonine-protein phosphatase 2 gene gene3571 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17915 SH05_RS17920 SH05_17935 SH05_RS17920 3609643 3610410 - DeoR family transcriptional regulator gene gene3572 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17920 SH05_RS17925 SH05_17940 SH05_RS17925 3610606 3611514 + dehydrogenase gene gene3573 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17925 SH05_RS17930 SH05_17945 SH05_RS17930 3611511 3612677 + DUF1537 domain-containing protein gene gene3574 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17930 SH05_RS17935 SH05_17950 SH05_RS17935 3612769 3613407 + aldolase gene gene3575 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17935 SH05_RS17940 SH05_17955 SH05_RS17940 3613412 3614188 + hydroxypyruvate isomerase gene gene3576 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17940 SH05_RS17945 SH05_17960 SH05_RS17945 3614277 3615641 + permease member of the Gnt family of gluconate transporters%3B not involved in gluconate transport%3B unknown function gene gene3577 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17945 SH05_RS17950 SH05_17965 SH05_RS17950 3615735 3616727 - RNA polymerase sigma factor RpoS sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor controls a regulon of genes required for protection against external stresses gene gene3578 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17950 SH05_RS17955 SH05_17970 nlpD nlpD 3616790 3617929 - murein hydrolase activator NlpD outer membrane lipoprotein involved in stationary-phase cell survival%3B similar to LppB virulence determinant from Haemophilus somnus gene gene3579 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17955 SH05_RS17960 SH05_17975 pcm pcm 3618069 3618695 - protein-L-isoaspartate O-methyltransferase catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins gene gene3580 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17960 SH05_RS17965 SH05_17980 surE surE 3618689 3619450 - 5'/3'-nucleotidase SurE broad specificity 5'(3')-nucleotidase and polyphosphatase gene gene3581 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17965 SH05_RS17970 SH05_17985 truD truD 3619431 3620480 - tRNA pseudouridine synthase D catalyzes the modification of U13 in tRNA(Glu) gene gene3582 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17970 SH05_RS17975 SH05_17990 ispF ispF 3620477 3620956 - 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate gene gene3583 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17975 SH05_RS17980 SH05_17995 SH05_RS17980 3620956 3621666 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase gene gene3584 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17980 SH05_RS17985 SH05_18000 ftsB ftsB 3621685 3621996 - cell division protein FtsB forms a complex with FtsL and FtsQ%3B colocalizes to the septal region of the dividing cell%3B membrane protein gene gene3585 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17985 SH05_RS17990 SH05_18005 SH05_RS17990 3622190 3622513 - hypothetical protein gene gene3586 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17990 SH05_RS17995 SH05_18010 SH05_RS17995 3622563 3623168 - adenylyl-sulfate kinase converts ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate%3B in Escherichia coli this enzyme functions in cysteine biosynthesis gene gene3587 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS17995 SH05_RS18000 SH05_18015 cysN cysN 3623168 3624595 - sulfate adenylyltransferase subunit 1 may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate%3B in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step%3B forms a heterodimer with CysD%3B part of the GTP-binding elongation factor family CysN/NodQ gene gene3588 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18000 SH05_RS18005 SH05_18020 SH05_RS18005 3624597 3625505 - sulfate adenylyltransferase subunit 2 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP gene gene3589 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18005 SH05_RS18010 SH05_18025 SH05_RS18010 3625757 3626794 + alkaline phosphatase isozyme conversion protein catalyzes the sequential removal of 2 amino-terminal arginines from alkaline phosphatase isozyme 1 to form isozymes 2 and 3 gene gene3590 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18010 SH05_RS18015 SH05_18030 SH05_RS18015 3627745 3628029 - CRISPR-associated endonuclease Cas2 gene gene3591 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18015 SH05_RS18020 SH05_18035 SH05_RS18020 3628031 3628948 - subtype I-E CRISPR-associated endonuclease Cas1 gene gene3592 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18020 SH05_RS18025 SH05_18040 SH05_RS18025 3628964 3629563 - CRISPR system Cascade subunit CasE gene gene3593 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18025 SH05_RS18030 SH05_18045 SH05_RS18030 3629550 3630224 - CRISPR system Cascade subunit CasD gene gene3594 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18030 SH05_RS18035 SH05_18050 SH05_RS18035 3630227 3631318 - CRISPR system Cascade subunit CasC gene gene3595 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18035 SH05_RS18040 SH05_18055 SH05_RS18040 3631331 3631813 - CRISPR system Cascade subunit CasB gene gene3596 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18040 SH05_RS18045 SH05_18060 SH05_RS18045 3631806 3633314 - CRISPR system Cascade subunit CasA CRISP RNA (crRNA) containing protein gene gene3597 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18045 SH05_RS18050 SH05_18065 SH05_RS18050 3633729 3636395 - CRISPR-associated endonuclease/helicase Cas3 required for the activity of the Cascade antiviral complex gene gene3598 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18050 SH05_RS18055 SH05_18070 SH05_RS18055 3636754 3637488 - phosphoadenosine phosphosulfate reductase catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite gene gene3599 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18055 SH05_RS18060 SH05_18075 SH05_RS18060 3637563 3639275 - sulfite reductase subunit beta hemoprotein%3B NADPH dependent%3B with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide gene gene3600 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18060 SH05_RS18065 SH05_18080 cysJ cysJ 3639275 3641074 - sulfite reductase subunit alpha catalyzes the reduction of sulfite to sulfide in the biosynthesis of L-cysteine from sulfate%3B a flavoprotein with flavin reductase activity gene gene3601 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18065 SH05_RS18070 SH05_18085 SH05_RS18070 3641393 3641755 + 6-carboxy-5%2C6%2C7%2C8-tetrahydropterin synthase gene gene3602 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18070 SH05_RS18075 SH05_18090 SH05_RS18075 3641833 3643104 + electron transfer flavoprotein-quinone oxidoreductase gene gene3603 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18075 SH05_RS18080 SH05_18095 SH05_RS18080 3643095 3643355 + ferredoxin-like protein YgcO gene gene3604 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18080 SH05_RS18085 SH05_18100 SH05_RS18085 3643372 3643947 + hypothetical protein gene gene3605 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18085 SH05_RS18090 SH05_18105 SH05_RS18090 3644095 3644955 - flavoprotein gene gene3606 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18090 SH05_RS18095 SH05_18110 SH05_RS18095 3644952 3645731 - flavoprotein gene gene3607 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18095 SH05_RS18100 SH05_18115 SH05_RS18100 3645709 3647046 - metabolite transporter gene gene3608 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18100 SH05_RS18105 SH05_18120 SH05_RS18105 3647140 3648594 - FAD-linked oxidoreductase gene gene3609 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18105 SH05_RS18110 SH05_18125 SH05_RS18110 3648664 3649449 - SDR family oxidoreductase gene gene3610 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18110 SH05_RS18115 SH05_18130 SH05_RS18115 3649768 3651045 + hypothetical protein gene gene3611 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18115 SH05_RS18120 SH05_18135 SH05_RS18120 3651072 3652550 + kinase gene gene3612 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18120 SH05_RS18125 SH05_18140 SH05_RS18125 3653923 3654594 - 7-carboxy-7-deazaguanine synthase gene gene3613 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18125 SH05_RS18130 SH05_18145 SH05_RS18130 3654733 3654873 + membrane stress resistance protein gene gene3614 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18130 SH05_RS18135 SH05_18150 SH05_RS18135 3654887 3655759 + TPM domain protein phosphatase gene gene3615 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18135 SH05_RS18140 SH05_18155 eno eno 3655819 3657117 - enolase catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis gene gene3616 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18140 SH05_RS18145 SH05_18160 pyrG pyrG 3657205 3658842 - CTP synthase CTP synthase%3B cytidine triphosphate synthetase%3B catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen%3B in Escherichia coli this enzyme forms a homotetramer gene gene3617 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18145 SH05_RS18150 SH05_18165 mazG mazG 3659070 3659861 - nucleoside triphosphate pyrophosphohydrolase functions in degradation of stringent response intracellular messenger ppGpp%3B in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF%3B activity of MazG is inhibited by MazEF in vitro%3B ppGpp inhibits mazEF expression%3B MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation%3B MazG also interacts with the GTPase protein Era gene gene3618 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18150 SH05_RS18155 SH05_18170 SH05_RS18155 3659932 3660267 - mRNA interferase MazF ChpA%3B endoribonuclease%3B toxin of the MazF-MazE (ChpA-ChpR) toxin-antitoxin system gene gene3619 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18155 SH05_RS18160 SH05_18175 SH05_RS18160 3660267 3660515 - antitoxin MazE part of the MazF-MazE toxin-antitoxin system%3B conteracts MazF gene gene3620 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18160 SH05_RS18165 SH05_18180 relA relA 3660593 3662827 - GTP pyrophosphokinase (p)ppGpp synthetase%3B catalyzes the formation of pppGpp and ppGpp from ATP and GTP or GDP gene gene3621 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18165 SH05_RS18170 SH05_18185 rumA rumA 3662875 3664176 - 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA%3B binds an iron-sulfur cluster [4Fe-4S] gene gene3622 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18170 SH05_RS18175 SH05_18190 SH05_RS18175 3664233 3666989 + signal transduction histidine kinase part of the two-component regulatory system with UvrY%3B involved in the regulation of carbon metabolism via the csrA/csrB regulatory system gene gene3623 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18175 SH05_RS18180 SH05_18195 gudD gudD 3667221 3668561 - glucarate dehydratase catalyzes the formation of 5-keto-4-deoxy-D-glucarate from glucarate gene gene3624 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18180 SH05_RS18185 SH05_18200 SH05_RS18185 3668582 3669922 - glucarate dehydratase-related protein gene gene3625 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18185 SH05_RS18190 SH05_18205 SH05_RS18190 3669924 3671276 - glucarate transporter gene gene3626 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18190 SH05_RS18195 SH05_18210 SH05_RS18195 3671711 3672160 - flavodoxin An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group gene gene3627 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18195 SH05_RS18200 SH05_18215 SH05_RS18200 3672178 3672960 - tRNA pseudouridine synthase C catalyzes formation of pseudouridine at position 65 in tRNA-Ile1 and tRNA-Asp gene gene3628 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18200 SH05_RS18205 SH05_18220 SH05_RS18205 3672960 3673289 - DUF446 domain-containing protein gene gene3629 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18205 SH05_RS18210 SH05_RS18210 SH05_RS18210 3673536 3673661 - hypothetical protein gene gene3630 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18210 SH05_RS18215 SH05_18230 SH05_RS18215 3673911 3674456 - protein Syd SecY regulator that either chelates excess SecY or negatively regulates the SecYE translocase function gene gene3631 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18215 SH05_RS18220 SH05_18235 queF queF 3674524 3675372 + NADPH-dependent 7-cyano-7-deazaguanine reductase catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis gene gene3632 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18220 SH05_RS18225 SH05_18240 SH05_RS18225 3675484 3676848 + LOG family protein gene gene3633 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18225 SH05_RS18230 SH05_18245 SH05_RS18230 3677405 3678694 + serine transporter gene gene3634 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18230 SH05_RS18235 SH05_18250 SH05_RS18235 3678752 3680119 + L-serine dehydratase 2 catalyzes the formation of pyruvate from serine gene gene3635 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18235 SH05_RS18240 SH05_18255 SH05_RS18240 3680231 3680986 + flap endonuclease Xni similar to flap endonuclease%3B FEN family%3B protein from E. coli does not have exonuclease activity gene gene3636 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18240 SH05_RS18245 SH05_18260 SH05_RS18245 3681041 3682189 - lactaldehyde reductase gene gene3637 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18245 SH05_RS18250 SH05_18265 SH05_RS18250 3682217 3682864 - L-fuculose phosphate aldolase catalyzes the formation of glycerone phosphate and (S)-lactaldehyde from L-fuculose 1-phosphate gene gene3638 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18250 SH05_RS18255 SH05_18270 SH05_RS18255 3683411 3684727 + L-fucose-proton symporter gene gene3639 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18255 SH05_RS18260 SH05_18275 fucI fucI 3684760 3686535 + L-fucose isomerase catalyzes the conversion of the aldose L-fucose into the corresponding ketose L-fuculose gene gene3640 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18260 SH05_RS18265 SH05_18280 SH05_RS18265 3686644 3688062 + L-fuculokinase gene gene3641 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18265 SH05_RS18270 SH05_18285 SH05_RS18270 3688064 3688486 + L-fucose mutarotase gene gene3642 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18270 SH05_RS18275 SH05_18290 SH05_RS18275 3688544 3689275 + l-fucose operon activator regulates expression of genes involved in L-fucose utilization gene gene3643 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18275 SH05_RS18280 SH05_18295 SH05_RS18280 3689319 3690419 - ribosomal RNA large subunit methyltransferase M gene gene3644 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18280 SH05_RS18285 SH05_18300 SH05_RS18285 3690412 3690807 - hypothetical protein gene gene3645 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18285 SH05_RS18290 SH05_18305 SH05_RS18290 3690826 3691743 - glycine cleavage system transcriptional activator Glycine cleavage system transcriptional activator%3B activates the gcvTHP operon in the presence of glycine and represses the operon in its absence gene gene3646 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18290 SH05_RS18295 SH05_18310 SH05_RS18295 3692094 3692321 - DUF903 domain-containing protein gene gene3647 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18295 SH05_RS18300 SH05_18315 SH05_RS18300 3692513 3693718 + cysteine desulfurase CsdA gene gene3648 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18300 SH05_RS18305 SH05_18320 SH05_RS18305 3693718 3694161 + sulfur acceptor protein CsdE binds and activates CsdA%3B Fe-S protein gene gene3649 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18305 SH05_RS18310 SH05_18325 SH05_RS18310 3694212 3695018 - tRNA threonylcarbamoyladenosine dehydratase accepts sulfur from CsdA gene gene3650 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18310 SH05_RS18315 SH05_18330 mltA mltA 3695257 3696354 - murein transglycosylase membrane-bound%2C lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues gene gene3651 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18315 SH05_RS18320 SH05_18335 SH05_RS18320 3696563 3696639 + tRNA-Met tRNA gene3652 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18320 SH05_RS18325 SH05_18340 SH05_RS18325 3696673 3696749 + tRNA-Met tRNA gene3653 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18325 SH05_RS18330 SH05_18345 SH05_RS18330 3696783 3696859 + tRNA-Met tRNA gene3654 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18330 SH05_RS18335 SH05_18350 amiC amiC 3696933 3698186 - N-acetylmuramoyl-L-alanine amidase hydrolyzes the bond between N-acetylmuramic acid and amino acid residues in peptidoglycan gene gene3655 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18335 SH05_RS18340 SH05_18355 SH05_RS18340 3698418 3699749 + N-acetylglutamate synthase catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis gene gene3656 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18340 SH05_RS18345 SH05_RS18345 recD recD 3699811 3701637 - exonuclease V subunit alpha helicase/nuclease%3B with RecBC catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5' to 3' helicase activity gene gene3657 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18345 SH05_RS18350 SH05_18365 recB recB 3701637 3705179 - RecBCD enzyme subunit RecB helicase/nuclease%3B with RecCD catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5' to 3' helicase activity gene gene3658 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18350 SH05_RS18355 SH05_18370 SH05_RS18355 3705172 3708060 - protease 3 degrades small peptides gene gene3659 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18355 SH05_RS18360 SH05_18375 recC recC 3708236 3711604 - RecBCD enzyme subunit RecC catalyzes ATP-dependent exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield 5'-phosphooligonucleotides%3B component of the RecBCD (Exo V) helicase/nuclease complex that is essential for recombination gene gene3660 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18360 SH05_RS18365 SH05_18380 SH05_RS18365 3711617 3711940 - prepilin peptidase-dependent protein C gene gene3661 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18365 SH05_RS18370 SH05_18385 SH05_RS18370 3711925 3712332 - DUF2509 domain-containing protein gene gene3662 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18370 SH05_RS18375 SH05_18390 SH05_RS18375 3712329 3712892 - prepilin peptidase-dependent protein B gene gene3663 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18375 SH05_RS18380 SH05_18395 SH05_RS18380 3712883 3713353 - prepilin peptidase-dependent protein A gene gene3664 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18380 SH05_RS18385 SH05_18400 SH05_RS18385 3713537 3714331 - thymidylate synthase gene gene3665 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18385 SH05_RS18390 SH05_18405 SH05_RS18390 3714338 3715213 - prolipoprotein diacylglyceryl transferase gene gene3666 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18390 SH05_RS18395 SH05_18410 SH05_RS18395 3715364 3717610 - phosphoenolpyruvate-protein phosphotransferase PtsP member of a second PTS chain involved in nitrogen metabolism%3B PtsP phosphorylates NPr gene gene3667 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18395 SH05_RS18400 SH05_18415 SH05_RS18400 3717623 3718153 - RNA pyrophosphohydrolase hydrolyzes diadenosine polyphosphate gene gene3668 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18400 SH05_RS18405 SH05_18420 SH05_RS18405 3718465 3718659 + hypothetical protein gene gene3669 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18405 SH05_RS18410 SH05_18425 SH05_RS18410 3718598 3718759 + hypothetical protein gene gene3670 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18410 SH05_RS18415 SH05_18430 SH05_RS18415 3718838 3719527 + DNA mismatch repair protein MutH MutH%3B Sequence-specific endonuclease that cleaves unmethylated GATC sequences during DNA repair gene gene3671 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18415 SH05_RS18420 SH05_18435 SH05_RS18420 3719596 3720309 + membrane protein gene gene3672 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18420 SH05_RS18425 SH05_18440 SH05_RS18425 3720447 3720665 + hypothetical protein gene gene3673 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18425 SH05_RS18430 SH05_18445 tas tas 3720773 3721813 + protein tas complements the prephenate dehydrogenase dysfunction of an Escherichia coli tyrosine auxotroph strain%3B member of the aldo/keto reductase 2 family%3B crystal structure of purified Escherichia coli protein shows bound NADPH gene gene3674 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18430 SH05_RS18435 SH05_18450 SH05_RS18435 3721845 3723038 - lysophospholipid transporter LplT gene gene3675 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18435 SH05_RS18440 SH05_18455 SH05_RS18440 3723031 3725190 - bifunctional protein Aas Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1 gene gene3676 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18440 SH05_RS18445 SH05_18460 SH05_RS18445 3725775 3726806 + transcriptional regulator controls transcription of galETKM gene gene3677 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18445 SH05_RS18450 SH05_18465 SH05_RS18450 3726813 3728075 - diaminopimelate decarboxylase catalyzes the decarboxylation of diaminopimelate into lysine%3B pyridoxal phosphate(PLP)-binding gene gene3678 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18450 SH05_RS18455 SH05_18470 SH05_RS18455 3728197 3729132 + LysR family transcriptional regulator activates the transcription of the lysA gene encoding diaminopimelate decarboxylase gene gene3679 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18455 SH05_RS18460 SH05_18475 SH05_RS18460 3729119 3729811 - Asp/Glu_racemase gene gene3680 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18460 SH05_RS18465 SH05_18480 SH05_RS18465 3729940 3731358 - D-galactose transporter gene gene3681 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18465 SH05_RS18470 SH05_18485 SH05_RS18470 3731673 3732434 - 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate gene gene3682 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18470 SH05_RS18475 SH05_18490 SH05_RS18475 3732464 3733300 - 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase%3B catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2%2C5-hexodiulosonate gene gene3683 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18475 SH05_RS18480 SH05_18495 SH05_RS18480 3733587 3734768 - acetyl-CoA acetyltransferase gene gene3684 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18480 SH05_RS18485 SH05_18500 SH05_RS18485 3735023 3736252 + transporter gene gene3685 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18485 SH05_RS18490 SH05_18505 SH05_RS18490 3736826 3737344 + LuxR family transcriptional regulator gene gene3686 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18490 SH05_RS18495 SH05_18510 SH05_RS18495 3737678 3738487 + transcriptional regulator gene gene3687 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18495 SH05_RS18500 SH05_18515 SH05_RS18500 3738480 3738962 + hypothetical protein gene gene3688 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18500 SH05_RS18505 SH05_18520 SH05_RS18505 3739111 3739536 - hypothetical protein gene gene3689 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18505 SH05_RS18510 SH05_RS18510 SH05_RS18510 3739730 3740219 + hypothetical protein gene gene3690 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18510 SH05_RS18515 SH05_18530 SH05_RS18515 3740444 3740935 + SycD-like chaperone family hypothetical protein gene gene3691 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18515 SH05_RS18520 SH05_18535 SH05_RS18520 3741270 3742646 + transcriptional regulator gene gene3692 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18520 SH05_RS18525 SH05_18540 SH05_RS18525 3742814 3743032 + hypothetical protein gene gene3693 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18525 SH05_RS18530 SH05_18545 SH05_RS18530 3743217 3743591 + lytic transglycosylase gene gene3694 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18530 SH05_RS18535 SH05_18550 SH05_RS18535 3743636 3744082 - LuxR family transcriptional regulator gene gene3695 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18535 SH05_RS18540 SH05_18555 SH05_RS18540 3744113 3744268 - transcriptional regulator gene gene3696 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18540 SH05_RS18545 SH05_18560 SH05_RS18545 3744490 3744921 - hypothetical protein gene gene3697 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18545 SH05_RS18550 SH05_18565 SH05_RS18550 3744924 3745196 - hypothetical protein gene gene3698 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18550 SH05_RS18555 SH05_18570 SH05_RS18555 3745138 3745293 - secretion protein gene gene3699 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18555 SH05_RS18560 SH05_18575 SH05_RS18560 3745548 3746453 - integrase gene gene3700 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18560 SH05_RS18565 SH05_18580 SH05_RS18565 3746411 3746776 - transposase represses IS2 gene transcription gene gene3701 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18565 SH05_RS18570 SH05_18585 SH05_RS18570 3746865 3747164 - hypothetical protein gene gene3702 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18570 SH05_RS18575 SH05_18590 SH05_RS18575 3747210 3748004 - hypothetical protein gene gene3703 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18575 SH05_RS18580 SH05_18595 SH05_RS18580 3748160 3748233 - tRNA-Gly tRNA gene3704 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18580 SH05_RS18585 SH05_18600 SH05_RS18585 3748312 3749067 - peptidoglycan-binding protein LysM gene gene3705 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18585 SH05_RS18590 SH05_18605 SH05_RS18590 3749482 3751779 + xanthine dehydrogenase subunit A molybdenum cofactor-binding protein%3B participates in purine salvage gene gene3706 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18590 SH05_RS18595 SH05_18610 SH05_RS18595 3751790 3752668 + xanthine dehydrogenase FAD-binding subunit FAD-binding subunit%3B with XdhA and XdhC participates in purine salvage gene gene3707 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18595 SH05_RS18600 SH05_18615 SH05_RS18600 3752665 3753144 + xanthine dehydrogenase iron-sulfur-binding subunit iron-sulfur-binding subunit%3B with XdhA and XdhB participates in purine salvage gene gene3708 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18600 SH05_RS18605 SH05_18620 SH05_RS18605 3753184 3754962 - sigma-54-interacting transcriptional activator gene gene3709 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18605 SH05_RS18610 SH05_18625 SH05_RS18610 3755441 3756628 + ornithine carbamoyltransferase gene gene3710 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18610 SH05_RS18615 SH05_18630 SH05_RS18615 3756686 3757882 + diaminopropionate ammonia-lyase catalyzes the formation of pyruvate from 2%2C3-diaminopropionate gene gene3711 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18615 SH05_RS18620 SH05_18635 SH05_RS18620 3757940 3759151 + peptidase Zn-dependent extracellular dipeptidase%3B similar to succinyl-diaminopimelate desuccinylases gene gene3712 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18620 SH05_RS18625 SH05_18640 SH05_RS18625 3759204 3760589 + D-phenylhydantoinase catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position gene gene3713 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18625 SH05_RS18630 SH05_18645 SH05_RS18630 3760637 3761569 + carbamate kinase-like protein YqeA gene gene3714 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18630 SH05_RS18635 SH05_18650 SH05_RS18635 3761790 3763415 - XdhC-CoxI family protein with NAD(P)-binding Rossman fold gene gene3715 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18635 SH05_RS18640 SH05_18655 SH05_RS18640 3763463 3764233 - selenium-dependent hydroxylase accessory protein gene gene3716 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18640 SH05_RS18645 SH05_18660 SH05_RS18645 3764336 3764914 + molybdenum cofactor cytidylyltransferase gene gene3717 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18645 SH05_RS18650 SH05_18665 SH05_RS18650 3765236 3768334 + Fe-S subunit oxidoreductase subunit with YgfM and YgfN forms a selenate reductase%2C which seems to catalyze the reduction of selenate to selenite%3B YgfK mutants are unable to reduce selenate%3B involved in purine salvage process%3B seems to act as an oxidoreductase%2C but sequence similarity suggests it is a dihydrothymine dehydrogenase gene gene3718 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18650 SH05_RS18655 SH05_18670 SH05_RS18655 3768337 3769665 + protein SsnA in Escherichia coli expression is induced in response to phase-specific signals and controlled by RpoS gene gene3719 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18655 SH05_RS18660 SH05_18675 SH05_RS18660 3769716 3770495 + oxidoreductase gene gene3720 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18660 SH05_RS18665 SH05_18680 SH05_RS18665 3770492 3773362 + hypoxanthine oxidase XdhD gene gene3721 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18665 SH05_RS18670 SH05_18685 SH05_RS18670 3773527 3774927 + xanthine permease XanQ high-affinity transporter for xanthine gene gene3722 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18670 SH05_RS18675 SH05_18690 SH05_RS18675 3774945 3776261 + guanine deaminase Catalyzes the deamination of guanine gene gene3723 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18675 SH05_RS18680 SH05_18695 SH05_RS18680 3776297 3777664 + guanine/hypoxanthine permease GhxQ gene gene3724 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18680 SH05_RS18685 SH05_18700 SH05_RS18685 3777700 3778188 - oxidoreductase gene gene3725 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18685 SH05_RS18690 SH05_18705 SH05_RS18690 3778188 3780107 - oxidoreductase Fe-S subunit/nucleotide-binding subunit unknown function%3B in E. coli the aegA gene is regulated by Fnr%2C NarXL%2C and NarQ (but not ArcA)%2C induced under anaerobic conditions and repressed in the presence of nitrate (anaerobic) gene gene3726 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18690 SH05_RS18695 SH05_RS18695 SH05_RS18695 3780410 3780598 + hypothetical protein gene gene3727 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18695 SH05_RS18700 SH05_18715 SH05_RS18700 3780543 3781991 + uric acid transporter UacT gene gene3728 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18700 SH05_RS18705 SH05_18720 SH05_RS18705 3781993 3782118 + hypothetical protein gene gene3729 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18705 SH05_RS18710 SH05_18725 SH05_RS18710 3782241 3782789 + isopentenyl-diphosphate delta isomerase catalyzes the rearrangement of isopentenyl diphosphate to dimethylallyl phosphate gene gene3730 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18710 SH05_RS18715 SH05_18730 lysS lysS 3782833 3784350 - lysine--tRNA ligase class II%3B LysRS2%3B catalyzes a two-step reaction%2C first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B in Methanosarcina barkeri%2C LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1 gene gene3731 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18715 SH05_RS18720 SH05_18735 SH05_RS18720 3784360 3785241 - peptide chain release factor 2 catalyzes the release of newly synthesized polypeptide chains at the stop codons UAA and UGA gene gene3732 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18720 SH05_RS18725 SH05_18740 SH05_RS18725 3785549 3787282 - single-stranded-DNA-specific exonuclease RecJ 5'-3' single-stranded-DNA-specific exonuclease gene gene3733 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18725 SH05_RS18730 SH05_18745 SH05_RS18730 3787288 3787998 - thiol:disulfide interchange protein DsbC DsbC%3B periplasmic protein with protein disulfide isomerase activity%3B this protein also shows disulfide oxidoreductase activity gene gene3734 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18730 SH05_RS18735 SH05_18750 xerD xerD 3788023 3788919 - tyrosine recombinase XerD site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B XerD specifically exchanges the bottom strands%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs gene gene3735 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18735 SH05_RS18740 SH05_18755 SH05_RS18740 3789031 3789552 + flavodoxin-2 An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic gene gene3736 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18740 SH05_RS18745 SH05_18760 SH05_RS18745 3789592 3789999 - toxin CptA gene gene3737 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18745 SH05_RS18750 SH05_RS18750 SH05_RS18750 3790016 3790246 - hypothetical protein gene gene3738 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18750 SH05_RS18755 SH05_18770 ygfZ ygfZ 3790489 3791469 + tRNA-modifying protein YgfZ physiological role is not clear%3B not essential for growth but mutants grow poorly%3B mutations suppress hda null mutations%3B may be involved in regulation of ATP-DnaA levels%3B may also be involved in regulation of tRNA modifications%3B can bind folic acid and tetrahydrofolate%3B forms a three domain ring-like structure with a central channel%3B structurally similar to DMGO protein from A. globiformis%3B shows sequence similarity to yeast CAF17 transcriptional regulato%3B Hda supressor gene gene3739 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18755 SH05_RS18760 SH05_18775 SH05_RS18760 3791665 3792324 - hemolysin gene gene3740 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18760 SH05_RS18765 SH05_18780 SH05_RS18765 3792488 3792799 - hypothetical protein gene gene3741 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18765 SH05_RS18770 SH05_18785 SH05_RS18770 3792844 3794277 + 6-phospho-beta-glucosidase gene gene3742 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18770 SH05_RS18775 SH05_18790 SH05_RS18775 3794334 3795077 - NAD(P)-dependent oxidoreductase gene gene3743 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18775 SH05_RS18780 SH05_18795 SH05_RS18780 3795344 3798217 - glycine dehydrogenase (decarboxylating) acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine gene gene3744 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18780 SH05_RS18785 SH05_18800 SH05_RS18785 3798336 3798725 - glycine cleavage system protein H part of multienzyme complex composed of H%2C L%2C P%2C and T proteins which catalyzes oxidation of glycine to yield carbon dioxide%2C ammonia%2C 5%2C10-CH2-H4folate and a reduced pyridine nucleotide%3B protein H is involved in transfer of methylamine group from the P to T protein%3B covalently bound to a lipoyl cofactor gene gene3745 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18785 SH05_RS18790 SH05_18805 gcvT gcvT 3798749 3799843 - aminomethyltransferase catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate%2C causing the release of ammonia and the generation of reduced GcvH protein gene gene3746 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18790 SH05_RS18795 SH05_18810 SH05_RS18795 3800291 3801493 - 2-octaprenylphenol hydroxylase gene gene3747 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18795 SH05_RS18800 SH05_18815 SH05_RS18800 3801516 3802694 - 2-octaprenyl-6-methoxyphenol hydroxylase Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1%2C4-benzoquinone gene gene3748 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18800 SH05_RS18805 SH05_18820 SH05_RS18805 3802691 3804016 - Xaa-Pro aminopeptidase exopeptidase able to cleave the peptide bond of the last amino acid if linked to a proline residue%3B substrate can be as short as a dipeptide gene gene3749 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18805 SH05_RS18810 SH05_18825 SH05_RS18810 3804042 3804626 - hypothetical protein the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers%3B function unknown gene gene3750 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18810 SH05_RS18815 SH05_18830 SH05_RS18815 3804788 3805117 + cell division protein ZapA gene gene3751 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18815 SH05_RS18820 SH05_18835 SH05_RS18820 3805363 3805965 + 5-formyltetrahydrofolate cyclo-ligase ygfA expression increases five to eight fold in Escherichia coli cells growing as biofilms%3B unknown function gene gene3752 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18820 SH05_RS18825 SH05_18840 SH05_RS18825 3806354 3807586 - D-3-phosphoglycerate dehydrogenase catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis%3B can also reduce alpha ketoglutarate to form 2-hydroxyglutarate gene gene3753 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18825 SH05_RS18830 SH05_18845 SH05_RS18830 3807842 3808501 - ribose-5-phosphate isomerase A catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway gene gene3754 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18830 SH05_RS18835 SH05_18850 SH05_RS18835 3808557 3808787 - hypothetical protein gene gene3755 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18835 SH05_RS18840 SH05_18855 SH05_RS18840 3808929 3809822 + chromosome initiation inhibitor specific inhibitor of chromosomal initiation of replication in vitro%3B binds the three 13-mers in the origin (oriC) to block initiation of replication%3B also controls genes involved in arginine transport gene gene3756 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18840 SH05_RS18845 SH05_18860 SH05_RS18845 3810026 3812170 + methylmalonyl-CoA mutase gene gene3757 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18845 SH05_RS18850 SH05_18865 SH05_RS18850 3812163 3813158 + GTPase ArgK gene gene3758 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18850 SH05_RS18855 SH05_18870 SH05_RS18855 3813169 3813954 + methylmalonyl-CoA decarboxylase catalyzes the formation of propanoyl-CoA from methylmalonyl-CoA gene gene3759 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18855 SH05_RS18860 SH05_18875 SH05_RS18860 3813978 3815456 + propionyl-CoA--succinate CoA transferase gene gene3760 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18860 SH05_RS18865 SH05_18880 SH05_RS18865 3815453 3816349 - transcriptional regulator gene gene3761 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18865 SH05_RS18870 SH05_18885 SH05_RS18870 3816516 3817256 - oxidative stress defense protein gene gene3762 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18870 SH05_RS18875 SH05_18890 SH05_RS18875 3817349 3817942 - arginine exporter protein Involved in the export of arginine gene gene3763 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18875 SH05_RS18880 SH05_18895 SH05_RS18880 3818123 3818983 - small-conductance mechanosensitive channel participates in the regulation of osmotic pressure changes within the cel gene gene3764 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18880 SH05_RS18885 SH05_18900 SH05_RS18885 3819341 3820420 - fructose-bisphosphate aldolase catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1%2C6%2C bisphosphate gene gene3765 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18885 SH05_RS18890 SH05_18905 SH05_RS18890 3820635 3821798 - phosphoglycerate kinase gene gene3766 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18890 SH05_RS18895 SH05_18910 gapA gapA 3821848 3822867 - D-erythrose-4-phosphate dehydrogenase required for glycolysis%3B catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate gene gene3767 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18895 SH05_RS18900 SH05_18915 SH05_RS18900 3823152 3823865 - PanK family P-loop kinase gene gene3768 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18900 SH05_RS18905 SH05_18920 SH05_RS18905 3823862 3824371 - MtlR family transcriptional regulator gene gene3769 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18905 SH05_RS18910 SH05_18925 SH05_RS18910 3824393 3825358 - fructose 1%2C6-bisphosphatase gene gene3770 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18910 SH05_RS18915 SH05_18930 SH05_RS18915 3825355 3826632 - Zn-binding dehydrogenase gene gene3771 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18915 SH05_RS18920 SH05_18935 SH05_RS18920 3826647 3828035 - PTS mannitol cryptic EIICB component CmtA with CmtB possibly forms the mannitol-like permease component of the cryptic mannitol phosphotransferase system%2C which phosphorylates and transports various carbohydrates and polyhydric alcohols in Escherichia coli%3B cytoplasmic protein gene gene3772 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18920 SH05_RS18925 SH05_18940 cmtB cmtB 3828063 3828506 - mannitol-specific cryptic phosphotransferase enzyme IIA component TolM%3B with CmtA (IIBC)%2C CmtB possibly forms the mannitol-like permease component of the cryptic mannitol phosphotransferase system%2C which phosphorylates and transports various carbohydrates and polyhydric alcohols in Escherichia coli%3B cytoplasmic protein gene gene3773 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18925 SH05_RS18930 SH05_18945 SH05_RS18930 3828820 3830811 - transketolase catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase gene gene3774 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18930 SH05_RS18935 SH05_18950 SH05_RS18935 3831089 3831847 + metalloprotease LoiP gene gene3775 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18935 SH05_RS18940 SH05_18955 SH05_RS18940 3832053 3832973 - agmatinase catalyzes the formation of putrescine from agmatine gene gene3776 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18940 SH05_RS18945 SH05_18960 SH05_RS18945 3833111 3835087 - biosynthetic arginine decarboxylase catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis gene gene3777 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18945 SH05_RS18950 SH05_18965 SH05_RS18950 3835096 3835227 - hypothetical protein gene gene3778 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18950 SH05_RS18955 SH05_18970 SH05_RS18955 3835363 3835578 + hypothetical protein gene gene3779 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18955 SH05_RS18960 SH05_18975 SH05_RS18960 3835575 3835826 - membrane protein gene gene3780 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18960 SH05_RS18965 SH05_18980 SH05_RS18965 3835882 3837036 + S-adenosylmethionine synthase catalyzes the formation of S-adenosylmethionine from methionine and ATP%3B methionine adenosyltransferase gene gene3781 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18965 SH05_RS18970 SH05_RS18970 SH05_RS18970 3837460 3838854 + D-galactose transporter GalP gene gene3782 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18970 SH05_RS18975 SH05_18990 SH05_RS18975 3838931 3839428 + protein SprT gene gene3783 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18975 SH05_RS18980 SH05_18995 SH05_RS18980 3839523 3840230 + endonuclease-1 gene gene3784 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18980 SH05_RS18985 SH05_19000 SH05_RS18985 3840310 3841041 + ribosomal RNA small subunit methyltransferase E in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA%3B cells lacking this function can grow%2C but are outcompeted by wild-type%3B SAM-dependent m(3)U1498 methyltransferase gene gene3785 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18985 SH05_RS18990 SH05_19005 SH05_RS18990 3841054 3842004 + glutathione synthetase catalyzes the second step in the glutathione biosynthesis pathway%2C where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine %3D ADP + phosphate + glutathione gene gene3786 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18990 SH05_RS18995 SH05_19010 SH05_RS18995 3842113 3842676 + hypothetical protein gene gene3787 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS18995 SH05_RS19000 SH05_19015 SH05_RS19000 3842676 3843092 + Holliday junction DNA helicase similar to RuvC resolvase with substantial differences%3B NMR structural information suggests this protein is monomeric%3B unknown cellular function gene gene3788 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19000 SH05_RS19005 SH05_19020 SH05_RS19005 3843276 3844256 - PilT family AAA+ ATPase gene gene3789 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19005 SH05_RS19010 SH05_19025 SH05_RS19010 3844274 3844978 + YggS family pyridoxal phosphate enzyme gene gene3790 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19010 SH05_RS19015 SH05_19030 SH05_RS19015 3844996 3845562 + hypothetical protein gene gene3791 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19015 SH05_RS19020 SH05_19035 SH05_RS19020 3845559 3845849 + hypothetical protein gene gene3792 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19020 SH05_RS19025 SH05_19040 SH05_RS19025 3845857 3846450 + non-canonical purine NTP pyrophosphatase HAM1-like protein%3B Rec-dependent growth%3B RgdB%3B yggV%3B it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine gene gene3793 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19025 SH05_RS19030 SH05_19045 SH05_RS19030 3846443 3847579 + coproporphyrinogen III oxidase gene gene3794 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19030 SH05_RS19035 SH05_19050 SH05_RS19035 3847734 3848741 - DUF1202 domain-containing protein gene gene3795 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19035 SH05_RS19040 SH05_19055 ansB ansB 3848858 3849904 - L-asparaginase 2 catalyzes the formation of aspartate from asparagine%2C periplasmic%3B regulated by cyclic AMP receptor protein (CRP) and also induced by anaerobiosis gene gene3796 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19040 SH05_RS19045 SH05_19060 SH05_RS19045 3850080 3850799 - hypothetical protein gene gene3797 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19045 SH05_RS19050 SH05_19065 SH05_RS19050 3850820 3850960 - hypothetical protein gene gene3798 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19050 SH05_RS19055 SH05_19070 SH05_RS19055 3850983 3851309 - hypothetical protein gene gene3799 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19055 SH05_RS19060 SH05_19075 trmB trmB 3851309 3852028 - tRNA (guanine-N(7)-)-methyltransferase tRNA (guanine-N(7)-)-methyltransferase%3B catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine gene gene3800 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19060 SH05_RS19065 SH05_19080 SH05_RS19065 3852189 3853241 + A/G-specific adenine glycosylase gene gene3801 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19065 SH05_RS19070 SH05_19085 SH05_RS19070 3853269 3853544 + Fe(2+)-trafficking protein protects iron-sulfur proteins against oxidative damage gene gene3802 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19070 SH05_RS19075 SH05_19090 mltC mltC 3853609 3854688 + murein transglycosylase Murein hydrolase C%3B membrane-bound%3B lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues gene gene3803 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19075 SH05_RS19080 SH05_19095 SH05_RS19080 3854890 3856146 + nucleoside permease NupG gene gene3804 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19080 SH05_RS19085 SH05_19100 SH05_RS19085 3856196 3858331 - ornithine decarboxylase gene gene3805 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19085 SH05_RS19090 SH05_19105 SH05_RS19090 3858729 3859436 + DUF554 domain-containing protein gene gene3806 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19090 SH05_RS19095 SH05_19110 SH05_RS19095 3859542 3859617 + tRNA-Phe tRNA gene3807 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19095 SH05_RS19100 SH05_19115 SH05_RS19100 3859766 3860302 - membrane-anchored secretion pathway M-type protein gene gene3808 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19100 SH05_RS19105 SH05_19120 SH05_RS19105 3860304 3861164 - type II secretion system protein GspL gene gene3809 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19105 SH05_RS19110 SH05_19125 SH05_RS19110 3861230 3862225 - type II secretion system protein GspC part of the general (type II) secretion pathway (GSP)%2C a signal sequence-dependent process responsible for protein export%3B involved in trans-location of exoproteins from the cytoplasm to the periplasm gene gene3810 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19110 SH05_RS19115 SH05_19130 SH05_RS19115 3862243 3862653 - secretin (GspDbeta) OM localization lipoprotein pilotin gene gene3811 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19115 SH05_RS19120 SH05_19135 SH05_RS19120 3862719 3863528 - leader peptidase PppA gene gene3812 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19120 SH05_RS19125 SH05_19140 SH05_RS19125 3863726 3868288 - and surface-associated lipoprotein mucinase gene gene3813 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19125 SH05_RS19130 SH05_19145 SH05_RS19130 3868439 3868621 + hypothetical protein gene gene3814 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19130 SH05_RS19135 SH05_19150 SH05_RS19135 3868773 3870455 - glycolate permease GlcA gene gene3815 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19135 SH05_RS19140 SH05_19155 SH05_RS19140 3870810 3872981 - malate synthase G gene gene3816 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19140 SH05_RS19145 SH05_19160 SH05_RS19145 3873003 3873407 - protein GlcG gene gene3817 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19145 SH05_RS19150 SH05_19165 glcF glcF 3873412 3874635 - glycolate oxidase gene gene3818 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19150 SH05_RS19155 SH05_19170 glcE glcE 3874646 3875698 - glycolate oxidase gene gene3819 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19155 SH05_RS19160 SH05_19175 SH05_RS19160 3875698 3877197 - glycolate oxidase gene gene3820 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19160 SH05_RS19165 SH05_19180 SH05_RS19165 3877448 3878212 + glc operon transcriptional activator gene gene3821 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19165 SH05_RS19170 SH05_19185 SH05_RS19170 3878219 3879355 - DNA-binding protein gene gene3822 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19170 SH05_RS19175 SH05_19190 SH05_RS19175 3879390 3880370 + transposase gene gene3823 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19175 SH05_RS19180 SH05_19195 SH05_RS19180 3880517 3881584 - hypothetical protein gene gene3824 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19180 SH05_RS19185 SH05_19200 SH05_RS19185 3881630 3882388 - ATP-binding protein gene gene3825 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19185 SH05_RS19190 SH05_19205 SH05_RS19190 3882420 3883118 - hypothetical protein gene gene3826 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19190 SH05_RS19195 SH05_19210 SH05_RS19195 3883307 3883999 + ATP-binding protein gene gene3827 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19195 SH05_RS19200 SH05_19215 SH05_RS19200 3884048 3885547 - low-affinity inorganic phosphate transporter 2 involved in the transport of inorganic phosphate gene gene3828 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19200 SH05_RS19205 SH05_19220 SH05_RS19205 3885839 3887698 - bifunctional glutathionylspermidine synthetase/amidase catalyzes the formation of glutathionylspermidine from glutathione and spermidine%3B also catalyzes the reverse reaction gene gene3829 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19205 SH05_RS19210 SH05_19225 SH05_RS19210 3887903 3888769 + disulfide-bond oxidoreductase YghU YghU%3B B2989%3B one of eight putative glutathione transferase proteins from E. coli gene gene3830 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19210 SH05_RS19215 SH05_19230 SH05_RS19215 3888892 3889140 - hydrogenase-2 operon protein HybG gene gene3831 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19215 SH05_RS19220 SH05_19235 hypA hypA 3889153 3889494 - hydrogenase nickel incorporation protein plays a role in hydrogenase nickel cofactor insertion gene gene3832 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19220 SH05_RS19225 SH05_19240 SH05_RS19225 3889487 3889975 - hydrogenase-2 operon protein HybE gene gene3833 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19225 SH05_RS19230 SH05_19245 hybD hybD 3889968 3890462 - hydrogenase 2 maturation protease protease responsible for the cleavage of a 15 amino acid peptide from the C-terminal end of the large subunit of hydrogenase 2 (HybC) gene gene3834 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19230 SH05_RS19235 SH05_19250 SH05_RS19235 3890462 3892165 - hydrogenase-2 large chain involved in hydrogen uptake gene gene3835 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19235 SH05_RS19240 SH05_19255 SH05_RS19240 3892162 3893340 - Ni/Fe-hydrogenase b-type cytochrome subunit HybB%3B cytochrome b subunit of the hydrogenase 2 enzyme%2C composed of HybA%2C B%2C C%2C and O subunits gene gene3836 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19240 SH05_RS19245 SH05_19260 SH05_RS19245 3893330 3894316 - hydrogenase-2 operon protein HybA Fe-S ferrodoxin type component%3B participates in the periplasmic electron-transferring activity of hydrogenase 2 gene gene3837 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19245 SH05_RS19250 SH05_19265 SH05_RS19250 3894319 3895437 - hydrogenase-2 small chain involved in hydrogen uptake gene gene3838 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19250 SH05_RS19255 SH05_19270 SH05_RS19255 3895444 3895629 - hypothetical protein gene gene3839 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19255 SH05_RS19260 SH05_19275 SH05_RS19260 3895626 3895913 - hypothetical protein gene gene3840 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19260 SH05_RS19265 SH05_RS19265 SH05_RS19265 3896032 3896916 - dienelactone hydrolase gene gene3841 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19265 SH05_RS19270 SH05_19285 SH05_RS19270 3897073 3898113 + glyceraldehyde 3-phosphate reductase gene gene3842 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19270 SH05_RS19275 SH05_19290 SH05_RS19275 3898153 3898647 - hypothetical protein gene gene3843 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19275 SH05_RS19280 SH05_19295 SH05_RS19280 3898838 3899722 + oxidoreductase gene gene3844 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19280 SH05_RS19285 SH05_19300 SH05_RS19285 3899994 3900419 - biopolymer transporter ExbD membrane spanning protein in TonB-ExbB-ExbD complex%3B involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell gene gene3845 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19285 SH05_RS19290 SH05_19305 SH05_RS19290 3900426 3901160 - biopolymer transporter ExbB membrane spanning protein in TonB-ExbB-ExbD complex%3B involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell gene gene3846 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19290 SH05_RS19295 SH05_19310 SH05_RS19295 3901153 3901290 - membrane protein gene gene3847 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19295 SH05_RS19300 SH05_19315 SH05_RS19300 3901412 3902599 + cystathionine beta-lyase MetC catalyzes the formation of L-homocysteine from cystathionine gene gene3848 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19300 SH05_RS19305 SH05_19320 SH05_RS19305 3902739 3903398 + hypothetical protein gene gene3849 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19305 SH05_RS19310 SH05_19325 SH05_RS19310 3903438 3904337 - AraC family transcriptional regulator gene gene3850 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19310 SH05_RS19315 SH05_19330 SH05_RS19315 3904334 3904480 - hypothetical protein gene gene3851 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19315 SH05_RS19320 SH05_19335 SH05_RS19320 3904531 3905694 + alcohol dehydrogenase gene gene3852 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19320 SH05_RS19325 SH05_19340 dkgA dkgA 3905799 3906626 + 2%2C5-diketo-D-gluconic acid reductase A methylglyoxal reductase/beta-keto ester reductase%3B catalyzes the reduction of 2%2C5-diketo-D-gluconic acid to 2-keto-L-gulonic acid%3B also catalyzes the reduction of methylglyoxal%2C ethyl-2-methylacetoacetate and ethyl-acetoacetate gene gene3853 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19325 SH05_RS19330 SH05_19345 SH05_RS19330 3906826 3907752 + DUF3828 domain-containing protein gene gene3854 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19330 SH05_RS19335 SH05_19350 SH05_RS19335 3907803 3908060 + hypothetical protein gene gene3855 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19335 SH05_RS19340 SH05_19355 SH05_RS19340 3908103 3910322 - Radical SAM superfamily protein gene gene3856 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19340 SH05_RS19345 SH05_19360 SH05_RS19345 3910433 3911845 - cell division protein FtsI septal ring component that protects the divisome from stress gene gene3857 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19345 SH05_RS19350 SH05_19365 SH05_RS19350 3911920 3912657 - 1-acyl-sn-glycerol-3-phosphate acyltransferase catalyzes the formation of 1%2C2-diacyl-sn-glycerol 3-phosphate from 1-acyl-sn-glycerol 3-phosphate using either acyl-CoA or acyl-ACP gene gene3858 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19350 SH05_RS19355 SH05_19370 SH05_RS19355 3912891 3915149 - DNA topoisomerase 4 subunit A decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling gene gene3859 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19355 SH05_RS19360 SH05_19375 SH05_RS19360 3915287 3916894 - ABC transporter permease gene gene3860 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19360 SH05_RS19365 SH05_19380 SH05_RS19365 3917027 3917422 - antitoxin gene gene3861 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19365 SH05_RS19370 SH05_19385 SH05_RS19370 3917424 3917720 - mRNA interferase MqsR gene gene3862 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19370 SH05_RS19375 SH05_19390 SH05_RS19375 3917925 3918407 - transcriptional regulator gene gene3863 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19375 SH05_RS19380 SH05_19395 SH05_RS19380 3918460 3918852 - hypothetical protein gene gene3864 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19380 SH05_RS19385 SH05_19400 SH05_RS19385 3919004 3919663 + two-component system response regulator response regulator in two-component regulatory system with QseC%3B regulates FlhCD which is the master regulator for flagella and motility genes gene gene3865 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19385 SH05_RS19390 SH05_19405 SH05_RS19390 3919660 3921009 + two-component system sensor histidine kinase gene gene3866 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19390 SH05_RS19395 SH05_19410 SH05_RS19395 3921055 3921387 - hypothetical protein gene gene3867 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19395 SH05_RS19400 SH05_19415 SH05_RS19400 3921706 3922287 + modulator of drug activity B involved in drug resistance gene gene3868 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19400 SH05_RS19405 SH05_19420 SH05_RS19405 3922318 3922632 + quinol monooxygenase YgiN catalyzes the oxidation of menadiol to menadione gene gene3869 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19405 SH05_RS19410 SH05_19425 SH05_RS19410 3922680 3924572 - DNA topoisomerase 4 subunit B decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling gene gene3870 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19410 SH05_RS19415 SH05_19430 SH05_RS19415 3924601 3925182 - esterase Displays esterase activity toward palmitoyl-CoA and pNP-butyrate gene gene3871 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19415 SH05_RS19420 SH05_19435 SH05_RS19420 3925182 3926009 - 3'%2C5'-cyclic adenosine monophosphate phosphodiesterase CpdA gene gene3872 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19420 SH05_RS19425 SH05_19440 SH05_RS19425 3926034 3926456 - dehydrogenase gene gene3873 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19425 SH05_RS19430 SH05_19445 nudF nudF 3926457 3927086 - ADP-ribose pyrophosphatase ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose gene gene3874 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19430 SH05_RS19435 SH05_19450 tolC tolC 3927291 3928772 + outer membrane protein TolC trimeric outer membrane protein involved in efflux of hydrophobic/amphipathic molecules%3B functions with a number of efflux systems in the inner membrane to transport molecules out of the cell gene gene3875 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19435 SH05_RS19440 SH05_19455 SH05_RS19440 3928772 3929032 + hypothetical protein gene gene3876 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19440 SH05_RS19445 SH05_19460 SH05_RS19445 3928920 3929591 + membrane protein gene gene3877 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19445 SH05_RS19450 SH05_19465 SH05_RS19450 3929597 3930757 + ATP-Grasp family ATPase gene gene3878 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19450 SH05_RS19455 SH05_19470 SH05_RS19455 3930795 3931583 - 4%2C5- DOPA-extradiol-dioxygenase seems to be involved in biofilm formation%3B in asymptomatic bacteriuria E. coli strains 83972 and VR50%2C the ygiD gene is upregulated during biofilm formation in urine gene gene3879 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19455 SH05_RS19460 SH05_19475 SH05_RS19460 3931726 3932499 + zinc transporter ZupT gene gene3880 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19460 SH05_RS19465 SH05_19480 SH05_RS19465 3932557 3932727 - hypothetical protein gene gene3881 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19465 SH05_RS19470 SH05_19485 ribB ribB 3932989 3933642 - 3%2C4-dihydroxy-2-butanone 4-phosphate synthase DHBP synthase%3B functions during riboflavin biosynthesis gene gene3882 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19470 SH05_RS19475 SH05_19490 SH05_RS19475 3934016 3934306 + BMFP family fusogenic protein gene gene3883 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19475 SH05_RS19480 SH05_19495 SH05_RS19480 3934590 3935141 + fimbrial-like adhesin protein gene gene3884 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19480 SH05_RS19485 SH05_19500 SH05_RS19485 3935363 3935728 + transposase represses IS2 gene transcription gene gene3885 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19485 SH05_RS19490 SH05_19505 SH05_RS19490 3935686 3936591 + integrase gene gene3886 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19490 SH05_RS19495 SH05_19510 SH05_RS19495 3936576 3939041 + fimbrial outer membrane usher protein StdB gene gene3887 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19495 SH05_RS19500 SH05_19515 SH05_RS19500 3939057 3939806 + periplasmic pilin chaperone gene gene3888 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19500 SH05_RS19505 SH05_19520 SH05_RS19505 3939808 3940872 + fimbrial protein gene gene3889 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19505 SH05_RS19510 SH05_19525 SH05_RS19510 3940915 3941115 - glycogen synthase Involved in glycogen synthesis. May be involved in glycogen priming gene gene3890 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19510 SH05_RS19515 SH05_19530 SH05_RS19515 3941384 3942013 + hypothetical protein gene gene3891 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19515 SH05_RS19520 SH05_19535 SH05_RS19520 3942040 3943701 + hypothetical protein gene gene3892 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19520 SH05_RS19525 SH05_RS19525 SH05_RS19525 3943802 3944054 + hypothetical protein gene gene3893 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19525 SH05_RS19530 SH05_RS19530 SH05_RS19530 3944038 3944429 + hypothetical protein gene gene3894 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19530 SH05_RS19535 SH05_19550 SH05_RS19535 3944496 3945929 - bifunctional protein HldE catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D%2CD-heptose-1%2C7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D%2CD-heptose gene gene3895 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19535 SH05_RS19540 SH05_19555 SH05_RS19540 3945977 3948817 - glutamate--ammonia-ligase adenylyltransferase catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase%3B also catalyzes the reverse reaction - deadenylation%3B adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme gene gene3896 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19540 SH05_RS19545 SH05_19560 SH05_RS19545 3948840 3950141 - inorganic triphosphatase gene gene3897 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19545 SH05_RS19550 SH05_19565 SH05_RS19550 3950158 3950343 - hypothetical protein gene gene3898 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19550 SH05_RS19555 SH05_19570 SH05_RS19555 3950383 3951003 + signal transduction protein gene gene3899 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19555 SH05_RS19560 SH05_19575 SH05_RS19560 3951067 3952305 + multifunctional CCA protein gene gene3900 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19560 SH05_RS19565 SH05_19580 SH05_RS19565 3952486 3953307 - undecaprenyl-diphosphatase BacA%3B phosphatase activity in Escherichia coli not kinase%3B involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell gene gene3901 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19565 SH05_RS19570 SH05_19585 folB folB 3953397 3953765 - dihydroneopterin aldolase catalyzes the conversion of 7%2C8-dihydroneopterin to 6-hydroxymethyl-7%2C8-dihydropterin and can also catalyze the epimerization of carbon 2' of dihydroneopterin and dihydromonapterin gene gene3902 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19570 SH05_RS19575 SH05_19590 SH05_RS19575 3953870 3954487 + glycerol-3-phosphate acyltransferase involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis%3B functions with PlsX gene gene3903 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19575 SH05_RS19580 SH05_19595 SH05_RS19580 3954500 3955432 - transcriptional activator TtdR gene gene3904 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19580 SH05_RS19585 SH05_19600 SH05_RS19585 3955642 3956550 + tartrate dehydratase subunit alpha Involved in the tartrate degradation pathway gene gene3905 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19585 SH05_RS19590 SH05_RS19590 SH05_RS19590 3956547 3957151 + tartrate dehydratase subunit beta Involved in the tartrate degradation pathway gene gene3906 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19590 SH05_RS19595 SH05_19610 SH05_RS19595 3957199 3958662 + L-tartrate/succinate antiporter involved in the transport of citrate into the cell along with the export of succinate out of the cell gene gene3907 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19595 SH05_RS19600 SH05_19615 SH05_RS19600 3958705 3959718 - tRNA N6-adenosine threonylcarbamoyltransferase universal genome maintenance protein%3B Kae1/Qri7/OSGEP/YgjD family protein%3B in Archaea%2C some Kae1 are found as fusion proteins similar to two distinct proteins in yeast that are involved in the KEOPS complex%3B kinase associated endopeptidase 1 (Kae1) and a serine/threonine protein kinase (Bud32)%3B in Pyrococcus Kae1 has atypical AP endonuclease activity and inhibits the kinase activity of Bud32%3B the protein is essential in Escherichia coli and Bacillus subtilis gene gene3908 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19600 SH05_RS19605 SH05_19620 rpsU rpsU 3959956 3960171 + 30S ribosomal protein S21 a small basic protein that is one of the last in the subunit assembly%3B omission does not prevent assembly but the subunit is inactive%3B binds central domain of 16S rRNA gene gene3909 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19605 SH05_RS19610 SH05_19625 dnaG dnaG 3960282 3962027 + DNA primase synthesizes RNA primers at the replication forks gene gene3910 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19610 SH05_RS19615 SH05_19630 SH05_RS19615 3962222 3964063 + RNA polymerase sigma factor RpoD sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this is the primary sigma factor of bacteria gene gene3911 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19615 SH05_RS19620 SH05_19635 SH05_RS19620 3964142 3964648 - G/U mismatch DNA glycosylase gene gene3912 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19620 SH05_RS19625 SH05_19640 SH05_RS19625 3964773 3964848 + tRNA-Met tRNA gene3913 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19625 SH05_RS19630 SH05_19645 SH05_RS19630 3964902 3965666 - NADPH-dependent ferric-chelate reductase gene gene3914 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19630 SH05_RS19635 SH05_19650 SH05_RS19635 3965954 3966577 + transcriptional regulator gene gene3915 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19635 SH05_RS19640 SH05_19655 SH05_RS19640 3966731 3968251 - aerotaxis receptor gene gene3916 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19640 SH05_RS19645 SH05_19660 SH05_RS19645 3968669 3970048 + putrescine aminotransferase catalyzes the formation of 4-aminobutyraldehyde from putrescine and 2-oxoglutarate gene gene3917 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19645 SH05_RS19650 SH05_19665 SH05_RS19650 3970090 3970422 - tRNA-binding protein gene gene3918 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19650 SH05_RS19655 SH05_19670 SH05_RS19655 3970641 3971624 + transcriptional regulator gene gene3919 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19655 SH05_RS19660 SH05_19675 ebgA ebgA 3971808 3974900 + evolved beta-galactosidase subunit alpha in Escherichia coli this is the second beta-galactosidase system gene gene3920 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19660 SH05_RS19665 SH05_19680 ebgC ebgC 3974897 3975346 + evolved beta-galactosidase subunit beta in Escherichia coli this is the second beta-galactosidase system gene gene3921 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19665 SH05_RS19670 SH05_19685 SH05_RS19670 3975409 3976842 + inner membrane transporter YgjI gene gene3922 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19670 SH05_RS19675 SH05_19690 SH05_RS19675 3976976 3978046 + periplasmic protein gene gene3923 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19675 SH05_RS19680 SH05_19695 SH05_RS19680 3978063 3980414 + glucosidase YgjK gene gene3924 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19680 SH05_RS19685 SH05_19700 SH05_RS19685 3980840 3982858 + 2%2C4-dienoyl-CoA reductase [NADPH] gene gene3925 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19685 SH05_RS19690 SH05_19705 SH05_RS19690 3982903 3983319 - antitoxin HigA gene gene3926 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19690 SH05_RS19695 SH05_19710 SH05_RS19695 3983316 3983630 - mRNA interferase HigB gene gene3927 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19695 SH05_RS19700 SH05_19715 SH05_RS19700 3983572 3983811 - toxin RelE gene gene3928 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19700 SH05_RS19705 SH05_19720 SH05_RS19705 3983914 3985050 - ribosomal RNA large subunit methyltransferase G gene gene3929 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19705 SH05_RS19710 SH05_19725 SH05_RS19710 3985135 3985638 + metal dependent hydrolase gene gene3930 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19710 SH05_RS19715 SH05_19730 SH05_RS19715 3985715 3986407 + DUF218 domain-containing protein gene gene3931 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19715 SH05_RS19720 SH05_19735 SH05_RS19720 3986486 3987472 + NAD(P)-dependent dehydrogenase gene gene3932 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19720 SH05_RS19725 SH05_19740 SH05_RS19725 3987755 3988720 + hypothetical protein gene gene3933 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19725 SH05_RS19730 SH05_19745 SH05_RS19730 3989119 3990363 + serine/threonine transporter SstT involved in the import of serine and threonine coupled with the import of sodium gene gene3934 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19730 SH05_RS19735 SH05_19750 SH05_RS19735 3990368 3990919 - hypothetical protein gene gene3935 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19735 SH05_RS19740 SH05_19755 SH05_RS19740 3991002 3992489 - altronate dehydratase gene gene3936 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19740 SH05_RS19745 SH05_19760 SH05_RS19745 3992504 3993916 - uronate isomerase catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate%3B functions in glucuronic and galacturonic metabolism gene gene3937 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19745 SH05_RS19750 SH05_19765 SH05_RS19750 3994399 3995697 + hexuronate transporter involved in the transport of aldohexuronates gene gene3938 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19750 SH05_RS19755 SH05_19770 SH05_RS19755 3995827 3996603 + exu regulon transcriptional regulator regulates the expression of uxuBA gene gene3939 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19755 SH05_RS19760 SH05_19775 SH05_RS19760 3996948 3997610 + hypothetical protein gene gene3940 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19760 SH05_RS19765 SH05_19780 SH05_RS19765 3997614 3997997 + modulator protein MzrA gene gene3941 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19765 SH05_RS19770 SH05_19785 SH05_RS19770 3998144 3998512 + hypothetical protein gene gene3942 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19770 SH05_RS19775 SH05_19790 SH05_RS19775 3998550 3998855 + hypothetical protein gene gene3943 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19775 SH05_RS19780 SH05_19795 SH05_RS19780 3998858 3999262 + hypothetical protein gene gene3944 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19780 SH05_RS19785 SH05_19800 SH05_RS19785 3999252 3999551 + hypothetical protein gene gene3945 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19785 SH05_RS19790 SH05_19805 SH05_RS19790 3999737 4000129 + hypothetical protein gene gene3946 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19790 SH05_RS19795 SH05_19810 SH05_RS19795 4000199 4001185 + glutathionyl-hydroquinone reductase YqjG gene gene3947 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19795 SH05_RS19800 SH05_19815 SH05_RS19800 4001479 4001844 + hypothetical protein gene gene3948 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19800 SH05_RS19805 SH05_19820 SH05_RS19805 4002086 4002442 + hypothetical protein gene gene3949 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19805 SH05_RS19810 SH05_19825 SH05_RS19810 4002493 4003389 - LysR family transcriptional regulator gene gene3950 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19810 SH05_RS19815 SH05_19830 SH05_RS19815 4003494 4004195 + pirin-like protein YhaK gene gene3951 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19815 SH05_RS19820 SH05_19835 SH05_RS19820 4004215 4004382 + hypothetical protein gene gene3952 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19820 SH05_RS19825 SH05_19840 SH05_RS19825 4004516 4005826 - L-serine dehydratase alpha chain gene gene3953 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19825 SH05_RS19830 SH05_19845 SH05_RS19830 4005854 4007185 - transporter gene gene3954 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19830 SH05_RS19835 SH05_19850 SH05_RS19835 4007460 4008824 - L-serine dehydratase TdcG catalyzes the formation of pyruvate from serine gene gene3955 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19835 SH05_RS19840 SH05_19855 SH05_RS19840 4008896 4009285 - reactive intermediate/imine deaminase has endoribonuclease activity on mRNA gene gene3956 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19840 SH05_RS19845 SH05_19860 SH05_RS19845 4009299 4011593 - PFL-like enzyme TdcE formate acetyltransferase%3B catalyzes the formation of formate and acetyl-CoA from pyruvate gene gene3957 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19845 SH05_RS19855 SH05_19870 SH05_RS19855 4012175 4013155 - transposase gene gene3959 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19855 SH05_RS19860 SH05_RS19860 SH05_RS19860 4013222 4014034 - propionate kinase catalyzes the formation of propanoyl phosphate from propanoate and ATP%3B TdcD also has acetate kinase activities and functions in anaerobic threonine catabolism gene gene3960 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19860 SH05_RS19865 SH05_19880 SH05_RS19865 4014060 4015391 - threonine/serine transporter TdcC gene gene3961 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19865 SH05_RS19870 SH05_19885 SH05_RS19870 4015413 4016402 - L-threonine dehydratase catabolic TdcB catalyzes the formation of 2-oxobutanoate from L-threonine%3B catabolic gene gene3962 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19870 SH05_RS19875 SH05_19890 SH05_RS19875 4016501 4017439 - transcriptional regulator regulates the tdcABCDEFG operon which is involved in amino acid degradation gene gene3963 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19875 SH05_RS19880 SH05_19895 SH05_RS19880 4017628 4017972 + transcriptional regulator participates in controlling the expression of several structural genes for the enzyme threonine dehydratase%3B TdcR activates the tdcABCDEFG operon gene gene3964 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19880 SH05_RS19885 SH05_19900 SH05_RS19885 4018228 4018767 + hypothetical protein gene gene3965 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19885 SH05_RS19890 SH05_19905 SH05_RS19890 4018789 4019976 + pentapetide repeats-related protein gene gene3966 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19890 SH05_RS19895 SH05_19910 SH05_RS19895 4020999 4022144 - glycerate 2-kinase gene gene3967 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19895 SH05_RS19900 SH05_19915 garR garR 4022241 4023131 - 2-hydroxy-3-oxopropionate reductase catalyzes the reduction of tartronate semialdehyde to glycerate gene gene3968 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19900 SH05_RS19905 SH05_19920 SH05_RS19905 4023161 4023931 - 5-keto-4-deoxy-D-glucarate aldolase cleaves 5-dehydro-4-deoxy-glucarate and 2-dehydro-3-deoxy-D-glucarate gene gene3969 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19905 SH05_RS19910 SH05_19925 SH05_RS19910 4023947 4025281 - galactarate transporter gene gene3970 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19910 SH05_RS19915 SH05_19930 garD garD 4025656 4027227 + D-galactarate dehydratase catalyzes the formation of 5-dehydro-4-deoxy-D-glucarate from D-galactarate gene gene3971 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19915 SH05_RS19920 SH05_19935 SH05_RS19920 4027376 4027711 + antitoxin PrlF SohA%3B PrlF%3B involved in protein secretion%3B when overproduced or mutated%2C it induces growth defect and increased export of a reporter protein%3B a PrlF mutation induces the activity of the Lon protease%2C and a Lon-deficient strain suppresses the phenotype conferred by the PrlF mutation gene gene3972 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19920 SH05_RS19925 SH05_19940 SH05_RS19925 4027711 4028175 + toxin YhaV gene gene3973 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19925 SH05_RS19930 SH05_19945 SH05_RS19930 4028230 4029039 - DeoR family transcriptional regulator transcriptional repressor for the agaZVWA and agaSYBCDI operons gene gene3974 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19930 SH05_RS19935 SH05_19950 SH05_RS19935 4029288 4030568 + tagatose-1%2C6-bisphosphate aldolase with KbaY catalyzes the formation of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate from tagatose-1%2C6-bisphosphate%3B subunit Z may act as a chaperone for the Y subunit gene gene3975 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19935 SH05_RS19940 SH05_19955 SH05_RS19940 4030591 4031064 + N-acetylgalactosamine-specific phosphotransferase enzyme IIB component 2 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake%3B involved in N-acetylgalactosamine transport gene gene3976 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19940 SH05_RS19945 SH05_19960 SH05_RS19945 4031075 4031476 + N-acetylgalactosamine permease IIC protein 2 gene gene3977 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19945 SH05_RS19950 SH05_19965 SH05_RS19950 4031496 4031999 + N-acetylgalactosamine-6-phosphate deacetylase gene gene3978 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19950 SH05_RS19955 SH05_19970 SH05_RS19955 4032350 4033504 + tagatose-6-phosphate ketose isomerase gene gene3979 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19955 SH05_RS19960 SH05_19975 kbaY kbaY 4033517 4034377 + tagatose-1%2C6-bisphosphate aldolase catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1%2C6-bisphosphate%3B in enteric bacteria there are two D-tagatose 1%2C6-bisphosphate-specific aldolases: KbaY (also called AgaY)%2C involved in catabolism of N-acetyl-galactosamine and D-galactosamine%2C and GatY which is part of the galactitol catabolism pathway gene gene3980 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19960 SH05_RS19965 SH05_19980 SH05_RS19965 4034544 4035020 + N-acetylgalactosamine-specific phosphotransferase enzyme IIB component 1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake%3B involved in N-acetylgalactosamine transport gene gene3981 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19965 SH05_RS19970 SH05_19985 SH05_RS19970 4035059 4035862 + N-acetylgalactosamine permease IIC component 1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3Bprotein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake%3B involved in N-acetylgalactosamine transport gene gene3982 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19970 SH05_RS19975 SH05_19990 SH05_RS19975 4035852 4036643 + N-acetylgalactosamine permease IID component catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IID with IIC forms the translocation channel%3B involved in N-acetylgalactosamine transport gene gene3983 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19975 SH05_RS19980 SH05_19995 SH05_RS19980 4036698 4037399 + galactosamine-6-phosphate isomerase gene gene3984 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19980 SH05_RS19985 SH05_20000 SH05_RS19985 4037800 4038384 + fimbrial-like adhesin protein gene gene3985 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19985 SH05_RS19990 SH05_20005 SH05_RS19990 4038464 4039159 + fimbrial chaperone gene gene3986 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19990 SH05_RS19995 SH05_20010 SH05_RS19995 4039188 4041704 + outer membrane usher protein YraJ gene gene3987 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS19995 SH05_RS20000 SH05_20015 SH05_RS20000 4041715 4042806 + fimbrial-like adhesin protein gene gene3988 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20000 SH05_RS20005 SH05_20020 SH05_RS20005 4042849 4043709 - ribosomal RNA small subunit methyltransferase I gene gene3989 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20005 SH05_RS20010 SH05_20025 SH05_RS20010 4043774 4045810 + penicillin-binding protein activator LpoA gene gene3990 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20010 SH05_RS20015 SH05_20030 SH05_RS20015 4045768 4046163 + hypothetical protein gene gene3991 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20015 SH05_RS20020 SH05_20035 SH05_RS20020 4046183 4046773 + DnaA initiator-associating protein DiaA Required for the timely initiation of chromosomal replication via direct interactions with the dnaA initiator protein gene gene3992 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20020 SH05_RS20025 SH05_20040 SH05_RS20025 4046783 4047358 + hypothetical protein gene gene3993 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20025 SH05_RS20030 SH05_20045 SH05_RS20030 4047472 4048512 - permease gene gene3994 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20030 SH05_RS20035 SH05_20050 SH05_RS20035 4048585 4049220 - nucleoside-diphosphate-sugar epimerase gene gene3995 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20035 SH05_RS20040 SH05_20055 SH05_RS20040 4049348 4049866 + hypothetical protein gene gene3996 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20040 SH05_RS20045 SH05_20060 SH05_RS20045 4049846 4050289 - hypothetical protein gene gene3997 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20045 SH05_RS20050 SH05_20065 SH05_RS20050 4050340 4050642 + nuclease superfamily protein gene gene3998 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20050 SH05_RS20055 SH05_20070 SH05_RS20055 4050629 4051132 - N-acetyltransferase gene gene3999 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20055 SH05_RS20060 SH05_20075 SH05_RS20060 4051126 4051650 - SCP-2 sterol transfer family protein gene gene4000 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20060 SH05_RS20065 SH05_20080 SH05_RS20065 4051859 4052854 + U32 peptidase gene gene4001 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20065 SH05_RS20070 SH05_20085 SH05_RS20070 4052863 4053741 + U32 peptidase gene gene4002 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20070 SH05_RS20075 SH05_20090 SH05_RS20075 4053822 4054829 + luciferase-like monooxygenase gene gene4003 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20075 SH05_RS20080 SH05_20095 SH05_RS20080 4054947 4056191 - tryptophan-specific transporter tryptophan transporter of high affinity gene gene4004 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20080 SH05_RS20085 SH05_20100 SH05_RS20085 4056207 4056344 + hypothetical protein gene gene4005 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20085 SH05_RS20090 SH05_20105 SH05_RS20090 4056345 4058234 - DEAD/DEAH box family ATP-dependent RNA helicase participates in the assembly of the large subunit of the ribosome%3B plays a key role in optimal cell growth at low temperature and is required for normal cell division gene gene4006 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20090 SH05_RS20095 SH05_20110 SH05_RS20095 4058414 4059298 - lipoprotein NlpI lipoprotein that appears to be involved in cell division%3B interacts with the periplasmic protease Prc and may be activated by protease processing gene gene4007 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20095 SH05_RS20100 SH05_20115 SH05_RS20100 4059407 4061542 - polyribonucleotide nucleotidyltransferase gene gene4008 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20100 SH05_RS20105 SH05_20120 SH05_RS20105 4061789 4062058 - 30S ribosomal protein S15 gene gene4009 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20105 SH05_RS20110 SH05_20125 truB truB 4062207 4063151 - tRNA pseudouridine synthase B catalyzes isomerization of specific uridines in RNA to pseudouridine%3B responsible for residues in T loops of many tRNAs gene gene4010 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20110 SH05_RS20115 SH05_20130 rbfA rbfA 4063151 4063552 - ribosome-binding factor A associates with free 30S ribosomal subunits%3B essential for efficient processing of 16S rRNA%3B in Escherichia coli rbfA is induced by cold shock gene gene4011 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20115 SH05_RS20120 SH05_20135 infB infB 4063716 4066388 - translation initiation factor IF-2 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex gene gene4012 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20120 SH05_RS20125 SH05_20140 nusA nusA 4066413 4067900 - transcription termination/antitermination protein NusA modifies transcription through interactions with RNA polymerase affecting elongation%2C readthrough%2C termination%2C and antitermination gene gene4013 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20125 SH05_RS20130 SH05_20145 SH05_RS20130 4067928 4068380 - ribosome maturation factor RimP required for the maturation of the 30S ribosomal subunits gene gene4014 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20130 SH05_RS20135 SH05_20150 SH05_RS20135 4068587 4068663 - tRNA-Met tRNA gene4015 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20135 SH05_RS20140 SH05_20155 SH05_RS20140 4069011 4070354 + argininosuccinate synthase catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis gene gene4016 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20140 SH05_RS20145 SH05_20160 SH05_RS20145 4070362 4071879 - phosphate starvation-inducible protein PsiE gene gene4017 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20145 SH05_RS20150 SH05_20165 SH05_RS20150 4072446 4072532 - tRNA-Leu tRNA gene4018 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20150 SH05_RS20155 SH05_20170 secG secG 4072547 4072879 - protein-export membrane protein SecG gene gene4019 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20155 SH05_RS20160 SH05_20175 glmM glmM 4073107 4074444 - phosphoglucosamine mutase catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate gene gene4020 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20160 SH05_RS20165 SH05_20180 folP folP 4074437 4075285 - dihydropteroate synthase catalyzes the formation of dihydropteroate from 2-amino-4-hydroxy-6-hydroxymethyl-7%2C8-dihydropteridine diphosphate and 4-aminobenzoate gene gene4021 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20165 SH05_RS20170 SH05_20185 hflB hflB 4075375 4077309 - ATP-dependent zinc metalloprotease FtsH inner membrane metalloprotease%3B may be involved in degradation of aberrant cytoplasmic and membrane proteins gene gene4022 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20170 SH05_RS20175 SH05_20190 rrmJ rrmJ 4077409 4078038 - ribosomal RNA large subunit methyltransferase E Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit gene gene4023 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20175 SH05_RS20180 SH05_20195 SH05_RS20180 4078164 4078457 + RNA-binding protein RNA binding protein found associated to pre-50S subunit of the ribosome%3B putative role in ribosome assembly%3B necessary for optimal growth but not cell viability gene gene4024 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20180 SH05_RS20185 SH05_20200 greA greA 4078613 4079089 - transcription elongation factor GreA necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites%3B arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through%2C resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus gene gene4025 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20185 SH05_RS20190 SH05_20205 SH05_RS20190 4079337 4080770 + D-alanyl-D-alanine carboxypeptidase penicillin binding protein 4%3B penicillin sensitive%3B catalyzes the formation of D-alanine from D-alanyl-D-alanine%3B one of four%2C DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains gene gene4026 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20190 SH05_RS20195 SH05_20210 obgE obgE 4080956 4082128 - GTPase CgtA ObgE%3B essential GTPase%3B exhibits high exchange rate for GTP/GDP%3B associates with 50S ribosomal subunit%3B involved in regulation of chromosomal replication gene gene4027 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20195 SH05_RS20200 SH05_20215 SH05_RS20200 4082144 4083109 - transporter gene gene4028 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20200 SH05_RS20205 SH05_20220 rpmA rpmA 4083236 4083493 - 50S ribosomal protein L27 involved in the peptidyltransferase reaction during translation gene gene4029 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20205 SH05_RS20210 SH05_20225 rplU rplU 4083514 4083825 - 50S ribosomal protein L21 gene gene4030 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20210 SH05_RS20215 SH05_20230 SH05_RS20215 4084084 4085055 + octaprenyl-diphosphate synthase gene gene4031 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20215 SH05_RS20220 SH05_20235 SH05_RS20220 4085283 4085561 + sugar fermentation stimulation protein B activator of maltose metabolism genes gene gene4032 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20220 SH05_RS20225 SH05_20240 SH05_RS20225 4085609 4086868 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase gene gene4033 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20225 SH05_RS20230 SH05_20245 SH05_RS20230 4086923 4087177 - acid stress protein IbaG gene gene4034 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20230 SH05_RS20235 SH05_20250 SH05_RS20235 4087337 4087630 - phospholipid ABC transporter-binding protein gene gene4035 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20235 SH05_RS20240 SH05_20255 SH05_RS20240 4087630 4088265 - phospholipid-binding protein involved in maintaining outer membrane lipid asymmetry gene gene4036 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20240 SH05_RS20245 SH05_20260 SH05_RS20245 4088284 4088835 - outer membrane lipid asymmetry maintenance protein MlaD gene gene4037 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20245 SH05_RS20250 SH05_20265 SH05_RS20250 4088840 4089622 - phospholipid ABC transporter permease gene gene4038 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20250 SH05_RS20255 SH05_20270 SH05_RS20255 4089630 4090439 - phospholipid import ATP-binding protein ABC transporter maintaining outer membrane lipid asymmetry gene gene4039 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20255 SH05_RS20260 SH05_20275 SH05_RS20260 4090649 4091626 + hypothetical protein YrbG%3B inner membrane protein involved in cell envelope integrity%3B putative sodium ion/calcium ion exchanger%3B in E. coli it is non essential for cell viability%3B member of the YRBG family of cation/Ca2+ exchangers gene gene4040 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20260 SH05_RS20265 SH05_20280 SH05_RS20265 4091640 4092626 + arabinose 5-phosphate isomerase KdsD gene gene4041 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20265 SH05_RS20270 SH05_20285 SH05_RS20270 4092647 4093213 + 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC forms homotetramers%3B catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate%3B functions in lipopolysaccharide biosynthesis gene gene4042 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20270 SH05_RS20275 SH05_20290 SH05_RS20275 4093210 4093785 + LPS export ABC transporter periplasmic protein LptC gene gene4043 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20275 SH05_RS20280 SH05_20295 SH05_RS20280 4093754 4094311 + LPS export system protein LptA LptA%3B periplasmic binding protein part of a putative ABC superfamily of uptake transporters%3B interacts with LptB protein%2C the ATP binding component of the uptake system gene gene4044 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20280 SH05_RS20285 SH05_20300 SH05_RS20285 4094318 4095043 + LPS export ABC transporter ATP-binding protein gene gene4045 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20285 SH05_RS20290 SH05_20305 SH05_RS20290 4095091 4096524 + RNA polymerase sigma-54 factor sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism%3B the rhizobia often have 2 copies of this sigma factor%3B in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation%3B in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions%2C rpoN1 gene was regulated in response to oxygen gene gene4046 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20290 SH05_RS20295 SH05_20310 SH05_RS20295 4096547 4096834 + ribosome hibernation promoting factor YhbH%3B resting ribosome-binding protein involved in ribosome stabilization and preservation in stationary phase%3B binds specifically 100S ribosomes (an inactive ribosome product of a 70S ribosome dimerization)%3B seems to be involved in modulation of the sigma(54) (RpoN) activity for quorum sensing gene gene4047 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20295 SH05_RS20300 SH05_20315 SH05_RS20300 4096952 4097443 + nitrogen regulatory protein involved in nitrogen metabolism%3B protein IIA is phosphorylated by enzyme I(Ntr) gene gene4048 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20300 SH05_RS20305 SH05_20320 SH05_RS20305 4097489 4098343 + glmZ(sRNA)-inactivating NTPase glucosamine-6-phosphate regulated%3B inactivates the glmS upregulator glmZ gene gene4049 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20305 SH05_RS20310 SH05_20325 SH05_RS20310 4098340 4098612 + phosphocarrier protein NPr gene gene4050 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20310 SH05_RS20315 SH05_20330 SH05_RS20315 4098826 4099458 + hypothetical protein gene gene4051 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20315 SH05_RS20320 SH05_20335 SH05_RS20320 4099726 4100706 - transposase gene gene4052 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20320 SH05_RS20325 SH05_20340 SH05_RS20325 4100705 4100953 + hypothetical protein gene gene4053 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20325 SH05_RS20330 SH05_20345 SH05_RS20330 4100950 4101666 + transcriptional regulator gene gene4054 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20330 SH05_RS20335 SH05_20350 SH05_RS20335 4101851 4102978 + DUF1016 domain-containing protein gene gene4055 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20335 SH05_RS20340 SH05_20355 SH05_RS20340 4103038 4103502 - DUF386 domain-containing protein gene gene4056 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20340 SH05_RS20345 SH05_20360 SH05_RS20345 4103499 4104374 - N-acetylmannosamine kinase catalyzes the phosphorylation of the N-acetylmannosamine (ManNAc) liberated from N-acetyl-neuraminic acid by the nanA protein gene gene4057 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20345 SH05_RS20350 SH05_20365 SH05_RS20350 4104371 4105060 - N-acetylmannosamine-6-P epimerase Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate gene gene4058 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20350 SH05_RS20355 SH05_20370 SH05_RS20355 4105108 4106598 - sialic acid transporter gene gene4059 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20355 SH05_RS20360 SH05_20375 SH05_RS20360 4106707 4107600 - N-acetylneuraminate lyase catalyzes the formation of pyruvate and N-acetylmannosamine from N-acetylneuraminic acid gene gene4060 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20360 SH05_RS20365 SH05_20380 SH05_RS20365 4107722 4108513 - transcriptional regulator NanR Transcriptional repressor of the nan operon that encodes proteins involved in sialic acid utilization gene gene4061 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20365 SH05_RS20370 SH05_20385 SH05_RS20370 4108893 4110260 + transporter YhcL%3B uncharacterized member of the DcuC family of anaerobic dicarboxylate transporters%3B probable role in transport of carboxylates across the inner membrane from the periplasm%3B its encoding gene is not essential for growth and is probably cryptic gene gene4062 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20370 SH05_RS20375 SH05_20390 SH05_RS20375 4110303 4110800 - stringent starvation protein B gene gene4063 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20375 SH05_RS20380 SH05_20395 sspA sspA 4110806 4111444 - stringent starvation protein A transcriptional activator%3B required for activation of bacteriophage P1 late promoter%3B induced by starvation gene gene4064 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20380 SH05_RS20385 SH05_20400 SH05_RS20385 4111839 4112231 - 30S ribosomal protein S9 gene gene4065 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20385 SH05_RS20390 SH05_20405 SH05_RS20390 4112247 4112675 - 50S ribosomal protein L13 gene gene4066 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20390 SH05_RS20395 SH05_20410 SH05_RS20395 4112894 4114021 - cell division protein ZapE gene gene4067 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20395 SH05_RS20400 SH05_20415 SH05_RS20400 4114215 4114613 + hypothetical protein gene gene4068 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20400 SH05_RS20405 SH05_20420 SH05_RS20405 4114767 4116134 + periplasmic pH-dependent serine endoprotease DegQ gene gene4069 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20405 SH05_RS20410 SH05_20425 SH05_RS20410 4116224 4117291 + serine endoprotease DegS gene gene4070 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20410 SH05_RS20415 SH05_20430 SH05_RS20415 4117354 4118292 - malate dehydrogenase oxidizes malate to oxaloacetate gene gene4071 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20415 SH05_RS20420 SH05_20435 SH05_RS20420 4118727 4119197 + arginine repressor regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes gene gene4072 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20420 SH05_RS20425 SH05_20440 SH05_RS20425 4119562 4119825 + membrane protein gene gene4073 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20425 SH05_RS20430 SH05_20445 SH05_RS20430 4119881 4120153 - barnase inhibitor gene gene4074 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20430 SH05_RS20435 SH05_20450 SH05_RS20435 4120245 4122212 - p-hydroxybenzoic acid efflux pump subunit AaeB with AaeA forms an efflux pump whose substrates are p-hydroxybenzoic acid 6-hydroxy-2-naphthoic and 2-hydroxycinnamate gene gene4075 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20435 SH05_RS20440 SH05_20455 SH05_RS20440 4122218 4123150 - p-hydroxybenzoic acid efflux pump subunit AaeA with AaeB forms an efflux pump whose substrates are p-hydroxybenzoic acid%2C 6-hydroxy-2-naphthoic and 2-hydroxycinnamate gene gene4076 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20440 SH05_RS20445 SH05_20460 SH05_RS20445 4123158 4123361 - protein AaeX membrane protein AaeX%3B the gene is a member of the aaeXAB operon gene gene4077 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20445 SH05_RS20450 SH05_20465 SH05_RS20450 4123544 4124473 + HTH-type transcriptional activator AaeR for aaeXAB operon gene gene4078 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20450 SH05_RS20455 SH05_20470 tldD tldD 4124607 4126052 - protease TldD responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17%2C an exported protein that targets the essential topoisomerase II DNA gyrase%3B degrades the E. coli plasmid F-encoded CcdA gene gene4079 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20455 SH05_RS20460 SH05_20475 SH05_RS20460 4126482 4130282 - hypothetical protein gene gene4080 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20460 SH05_RS20465 SH05_20480 SH05_RS20465 4130350 4131819 - ribonuclease G involved in the processing of the 5'end of 16S rRNA gene gene4081 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20465 SH05_RS20470 SH05_20485 SH05_RS20470 4131809 4132402 - septum formation inhibitor Maf Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell gene gene4082 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20470 SH05_RS20475 SH05_20490 SH05_RS20475 4132411 4132899 - rod shape-determining protein MreD part of cell wall structural complex MreBCD%3B transmembrane component gene gene4083 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20475 SH05_RS20480 SH05_20495 SH05_RS20480 4132899 4134002 - cell shape-determining protein MreC in some organisms this protein is a transmembrane protein while in others it is periplasmic%3B involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall gene gene4084 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20480 SH05_RS20485 SH05_20500 SH05_RS20485 4134068 4135111 - rod shape-determining protein MreB gene gene4085 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20485 SH05_RS20490 SH05_20505 SH05_RS20490 4135219 4135407 + hypothetical protein gene gene4086 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20490 SH05_RS20495 SH05_20510 SH05_RS20495 4135416 4137356 - RNase E specificity factor CsrD regulates the degradation of the small RNAs CsrB and CsrC%3B may function to targate RNase E to specific RNA molecules gene gene4087 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20495 SH05_RS20500 SH05_20515 SH05_RS20500 4137508 4138482 + acrylyl-CoA reductase AcuI gene gene4088 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20500 SH05_RS20505 SH05_20520 SH05_RS20505 4138540 4138641 - hypothetical protein gene gene4089 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20505 SH05_RS20510 SH05_20525 SH05_RS20510 4138768 4138887 + hypothetical protein gene gene4090 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20510 SH05_RS20515 SH05_20530 SH05_RS20515 4138891 4139055 + hypothetical protein gene gene4091 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20515 SH05_RS20520 SH05_20535 SH05_RS20520 4139460 4139930 + acetyl-CoA carboxylase biotin carboxyl carrier protein subunit composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex%2C the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism gene gene4092 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20520 SH05_RS20525 SH05_20540 SH05_RS20525 4139941 4141290 + acetyl-CoA carboxylase biotin carboxylase subunit an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase%2C an enzyme that catalyzes the formation of malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism gene gene4093 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20525 SH05_RS20530 SH05_20545 SH05_RS20530 4141399 4141641 + DUF997 domain-containing protein gene gene4094 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20530 SH05_RS20535 SH05_20550 panF panF 4141631 4143082 + sodium/pantothenate symporter mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions%3B member of SSS family of sodium/solute symporters%3B the imported panthothenate is phosphorylated by panthothenate kinase gene gene4095 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20535 SH05_RS20540 SH05_20555 prmA prmA 4143094 4143975 + ribosomal protein L11 methyltransferase methylates ribosomal protein L11 at multiple amino acid positions%3B mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype gene gene4096 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20540 SH05_RS20545 SH05_20560 SH05_RS20545 4144304 4145269 + tRNA-dihydrouridine synthase B gene gene4097 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20545 SH05_RS20550 SH05_20565 fis fis 4145295 4145591 + Fis family transcriptional regulator Stimulates excision of phage lambda%3B affects Mu development%3B acts as an activator of rRNA and iRNA transcription gene gene4098 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20550 SH05_RS20555 SH05_20570 SH05_RS20555 4145677 4146561 + DNA adenine methyltransferase YhdJ gene gene4099 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20555 SH05_RS20560 SH05_20575 SH05_RS20560 4146645 4146824 + transporter gene gene4100 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20560 SH05_RS20565 SH05_20580 SH05_RS20565 4146827 4147489 - acrEF/envCD operon repressor gene gene4101 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20565 SH05_RS20570 SH05_20585 SH05_RS20570 4147888 4149045 + MexX family efflux pump subunit with AcrD and TolC forms a transport system involved in resistance to a number of compounds including lipophilic antibiotics gene gene4102 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20570 SH05_RS20575 SH05_20590 SH05_RS20575 4149057 4152161 + multidrug efflux RND transporter permease subunit gene gene4103 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20575 SH05_RS20580 SH05_20595 SH05_RS20580 4152414 4152635 + membrane protein gene gene4104 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20580 SH05_RS20585 SH05_20600 SH05_RS20585 4152861 4153037 + hypothetical protein gene gene4105 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20585 SH05_RS20590 SH05_20605 SH05_RS20590 4153173 4154090 + amino acid ABC transporter substrate-binding protein gene gene4106 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20590 SH05_RS20595 SH05_20610 SH05_RS20595 4154158 4155339 + amino acid ABC transporter permease gene gene4107 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20595 SH05_RS20600 SH05_20615 SH05_RS20600 4155349 4156452 + amino acid ABC transporter permease gene gene4108 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20600 SH05_RS20605 SH05_20620 SH05_RS20605 4156460 4157218 + amino acid ABC transporter ATPase gene gene4109 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20605 SH05_RS20610 SH05_20625 SH05_RS20610 4157449 4157564 - 5S ribosomal RNA rRNA gene4110 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20610 SH05_RS20615 SH05_20630 SH05_RS20615 4157604 4157679 - tRNA-Thr tRNA gene4111 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20615 SH05_RS20620 SH05_20635 SH05_RS20620 4157694 4157809 - 5S ribosomal RNA rRNA gene4112 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20620 SH05_RS20625 SH05_20640 SH05_RS20625 4157887 4160816 - 23S ribosomal RNA rRNA gene4113 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20625 SH05_RS20630 SH05_20645 SH05_RS20630 4160982 4161057 - tRNA-Ala tRNA gene4114 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20630 SH05_RS20635 SH05_20650 SH05_RS20635 4161100 4161176 - tRNA-Ile tRNA gene4115 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20635 SH05_RS20640 SH05_20655 SH05_RS20640 4161233 4162788 - 16S ribosomal RNA rRNA gene4116 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20640 SH05_RS20645 SH05_20660 SH05_RS20645 4163260 4163814 + hypothetical protein gene gene4117 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20645 SH05_RS20650 SH05_20665 SH05_RS20650 4163790 4164047 - DUF1488 domain-containing protein gene gene4118 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20650 SH05_RS20655 SH05_20670 SH05_RS20655 4164044 4164862 - shikimate dehydrogenase (NADP+) gene gene4119 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20655 SH05_RS20660 SH05_20675 SH05_RS20660 4164867 4165439 - threonylcarbamoyl-AMP synthase involved in the biosynthesis of the threonylcarbamoyladenosine (t6A) residue at position 37 of ANN-decoding tRNAs gene gene4120 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20660 SH05_RS20665 SH05_20680 SH05_RS20665 4165444 4165986 - ssDNA-binding protein%2C function unknown gene gene4121 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20665 SH05_RS20670 SH05_20685 SH05_RS20670 4166015 4166488 - protein Smg gene gene4122 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20670 SH05_RS20675 SH05_20690 SH05_RS20675 4166460 4167584 - protein smf gene gene4123 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20675 SH05_RS20680 SH05_20695 SH05_RS20680 4167714 4168223 + peptide deformylase gene gene4124 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20680 SH05_RS20685 SH05_20700 fmt fmt 4168238 4169185 + methionyl-tRNA formyltransferase modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation%3B inactivation of this gene in Escherichia coli severely impairs growth gene gene4125 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20685 SH05_RS20690 SH05_20705 SH05_RS20690 4169231 4170520 + ribosomal RNA small subunit methyltransferase B catalyzes the methylation of cytosine at position 967 (m5C967) of 16S rRNA%3B SAM-dependent methyltransferase gene gene4126 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20690 SH05_RS20695 SH05_20710 trkA trkA 4170542 4171918 + trk system potassium uptake protein trkA involved in potassium uptake%3B found to be peripherally associated with the inner membrane in Escherichia coli%3B contains an NAD-binding domain gene gene4127 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20695 SH05_RS20700 SH05_20715 mscL mscL 4172048 4172458 + large-conductance mechanosensitive channel forms homopentamer%3B channel that opens in response to pressure or hypoosmotic shock gene gene4128 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20700 SH05_RS20705 SH05_20720 SH05_RS20705 4172455 4172673 - ribosome-rescue factor A gene gene4129 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20705 SH05_RS20710 SH05_20725 zntR zntR 4172729 4173154 - transcriptional regulator mediates expression of the zinc export protein ZntA in response to high levels of zinc%3B member of MerR family of transcriptional regulators gene gene4130 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20710 SH05_RS20715 SH05_20730 SH05_RS20715 4173165 4173533 - DUF1992 domain-containing protein gene gene4131 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20715 SH05_RS20720 SH05_20735 rplQ rplQ 4173640 4174023 - 50S ribosomal protein L17 is a component of the macrolide binding site in the peptidyl transferase center gene gene4132 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20720 SH05_RS20725 SH05_20740 SH05_RS20725 4174064 4175053 - DNA-directed RNA polymerase subunit alpha catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme gene gene4133 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20725 SH05_RS20730 SH05_20745 SH05_RS20730 4175079 4175699 - 30S ribosomal protein S4 gene gene4134 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20730 SH05_RS20735 SH05_20750 SH05_RS20735 4175733 4176122 - 30S ribosomal protein S11 gene gene4135 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20735 SH05_RS20740 SH05_20755 SH05_RS20740 4176139 4176495 - 30S ribosomal protein S13 gene gene4136 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20740 SH05_RS20745 SH05_20760 SH05_RS20745 4176642 4176758 - 50S ribosomal protein L36 gene gene4137 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20745 SH05_RS20750 SH05_20765 secY secY 4176790 4178121 - preprotein translocase subunit SecY forms heterotrimeric complex in the membrane%3B in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG%3B the SecG subunit is not essential%3B in bacteria translocation is driven via the SecA ATPase gene gene4138 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20750 SH05_RS20755 SH05_20770 SH05_RS20755 4178129 4178563 - 50S ribosomal protein L15 gene gene4139 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20755 SH05_RS20760 SH05_20775 rpmD rpmD 4178567 4178746 - 50S ribosomal protein L30 L30 binds domain II of the 23S rRNA and the 5S rRNA%3B similar to eukaryotic protein L7 gene gene4140 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20760 SH05_RS20765 SH05_20780 SH05_RS20765 4178750 4179253 - 30S ribosomal protein S5 gene gene4141 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20765 SH05_RS20770 SH05_20785 SH05_RS20770 4179268 4179621 - 50S ribosomal protein L18 gene gene4142 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20770 SH05_RS20775 SH05_20790 SH05_RS20775 4179631 4180164 - 50S ribosomal protein L6 gene gene4143 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20775 SH05_RS20780 SH05_20795 SH05_RS20780 4180177 4180569 - 30S ribosomal protein S8 gene gene4144 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20780 SH05_RS20785 SH05_20800 rpsN rpsN 4180603 4180908 - 30S ribosomal protein S14 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit%3B similar to what is observed with proteins L31 and L33%2C some proteins in this family contain CXXC motifs that are involved in zinc binding%3B if two copies are present in a genome%2C then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc%3B the proteins in this group do not appear to have the zinc-binding motif gene gene4145 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20785 SH05_RS20790 SH05_20805 SH05_RS20790 4180923 4181462 - 50S ribosomal protein L5 gene gene4146 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20790 SH05_RS20795 SH05_20810 rplX rplX 4181477 4181791 - 50S ribosomal protein L24 assembly initiator protein%3B binds to 5' end of 23S rRNA and nucleates assembly of the 50S%3B surrounds polypeptide exit tunnel gene gene4147 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20795 SH05_RS20800 SH05_20815 SH05_RS20800 4181802 4182173 - 50S ribosomal protein L14 gene gene4148 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20800 SH05_RS20805 SH05_20820 SH05_RS20805 4182338 4182592 - 30S ribosomal protein S17 gene gene4149 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20805 SH05_RS20810 SH05_20825 SH05_RS20810 4182592 4182783 - 50S ribosomal protein L29 one of the stabilizing components for the large ribosomal subunit gene gene4150 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20810 SH05_RS20815 SH05_20830 SH05_RS20815 4182783 4183193 - 50S ribosomal protein L16 gene gene4151 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20815 SH05_RS20820 SH05_20835 SH05_RS20820 4183206 4183907 - 30S ribosomal protein S3 gene gene4152 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20820 SH05_RS20825 SH05_20840 SH05_RS20825 4183925 4184257 - 50S ribosomal protein L22 gene gene4153 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20825 SH05_RS20830 SH05_20845 SH05_RS20830 4184272 4184550 - 30S ribosomal protein S19 gene gene4154 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20830 SH05_RS20835 SH05_20850 SH05_RS20835 4184567 4185388 - 50S ribosomal protein L2 gene gene4155 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20835 SH05_RS20840 SH05_20855 rplW rplW 4185406 4185708 - 50S ribosomal protein L23 binds third domain of 23S rRNA and protein L29%3B part of exit tunnel gene gene4156 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20840 SH05_RS20845 SH05_20860 rplD rplD 4185705 4186310 - 50S ribosomal protein L4 L4 is important during the early stages of 50S assembly%3B it initially binds near the 5' end of the 23S rRNA gene gene4157 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20845 SH05_RS20850 SH05_20865 SH05_RS20850 4186321 4186950 - 50S ribosomal protein L3 gene gene4158 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20850 SH05_RS20855 SH05_20870 rpsJ rpsJ 4186983 4187294 - 30S ribosomal protein S10 NusE%3B involved in assembly of the 30S subunit%3B in the ribosome%2C this protein is involved in the binding of tRNA%3B in Escherichia coli this protein was also found to be involved in transcription antitermination%3B NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination%3B binding of NusB/S10 to boxA nucleates assembly of the antitermination complex gene gene4159 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20855 SH05_RS20860 SH05_20875 SH05_RS20860 4187532 4187951 - hypothetical protein involved in type II protein secretion gene gene4160 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20860 SH05_RS20865 SH05_20880 SH05_RS20865 4187953 4189422 - general secretory pathway protein gene gene4161 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20865 SH05_RS20870 SH05_20885 SH05_RS20870 4189602 4190417 + type II secretion system protein GspC gene gene4162 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20870 SH05_RS20875 SH05_20890 SH05_RS20875 4190401 4192353 + type II secretion system protein GspD gene gene4163 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20875 SH05_RS20880 SH05_20895 SH05_RS20880 4192363 4193844 + type II secretion system protein GspE gene gene4164 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20880 SH05_RS20885 SH05_20900 SH05_RS20885 4193841 4195037 + type II secretion system protein GspF gene gene4165 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20885 SH05_RS20890 SH05_20905 SH05_RS20890 4195047 4195484 + type II secretion system protein GspG gene gene4166 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20890 SH05_RS20895 SH05_20910 SH05_RS20895 4195492 4196001 + type II secretion system protein GspH gene gene4167 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20895 SH05_RS20900 SH05_20915 SH05_RS20900 4195998 4196375 + type II secretion system protein GspI gene gene4168 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20900 SH05_RS20905 SH05_20920 SH05_RS20905 4196368 4196955 + general secretion pathway protein gene gene4169 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20905 SH05_RS20910 SH05_20925 SH05_RS20910 4196948 4197931 + general secretory pathway protein gene gene4170 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20910 SH05_RS20915 SH05_20930 SH05_RS20915 4197946 4199109 + type II secretion system protein GspL gene gene4171 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20915 SH05_RS20920 SH05_20935 SH05_RS20920 4199106 4199567 + general secretion pathway protein GspM gene gene4172 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20920 SH05_RS20925 SH05_20940 SH05_RS20925 4199567 4200244 + type 4 prepilin-like proteins leader peptide-processing enzyme gene gene4173 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20925 SH05_RS20930 SH05_20945 SH05_RS20930 4200273 4200749 - bacterioferritin iron storage protein gene gene4174 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20930 SH05_RS20935 SH05_20950 SH05_RS20935 4200821 4201015 - bacterioferritin-associated ferredoxin gene gene4175 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20935 SH05_RS20940 SH05_20955 SH05_RS20940 4201184 4203877 - bifunctional chitinase/lysozyme gene gene4176 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20940 SH05_RS20945 SH05_20960 tuf tuf 4204169 4205353 - translation elongation factor EF-Tu 1 EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu gene gene4177 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20945 SH05_RS20950 SH05_20965 fusA fusA 4205424 4207538 - elongation factor G EF-G%3B promotes GTP-dependent translocation of the ribosome during translation%3B many organisms have multiple copies of this gene gene gene4178 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20950 SH05_RS20955 SH05_20970 SH05_RS20955 4207566 4208105 - 30S ribosomal protein S7 gene gene4179 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20955 SH05_RS20960 SH05_20975 SH05_RS20960 4208202 4208576 - 30S ribosomal protein S12 gene gene4180 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20960 SH05_RS20965 SH05_20980 SH05_RS20965 4208702 4208989 - protein TusB in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs gene gene4181 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20965 SH05_RS20970 SH05_20985 SH05_RS20970 4208997 4209356 - protein TusC in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur transfer that results in thiouridation to U34 position in some tRNAs gene gene4182 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20970 SH05_RS20975 SH05_20990 SH05_RS20975 4209356 4209742 - sulfurtransferase TusD in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs gene gene4183 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20975 SH05_RS20980 SH05_20995 SH05_RS20980 4209742 4210464 - transcriptional regulator gene gene4184 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20980 SH05_RS20985 SH05_21000 SH05_RS20985 4210631 4211443 - FKBP-type peptidyl-prolyl cis-trans isomerase rotamase gene gene4185 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20985 SH05_RS20990 SH05_21005 SH05_RS20990 4211664 4211882 + protein SlyX required for phi X174 lysis gene gene4186 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20990 SH05_RS20995 SH05_21010 SH05_RS20995 4211931 4212521 - FKBP-type peptidyl-prolyl cis-trans isomerase rotamase gene gene4187 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS20995 SH05_RS21000 SH05_21015 SH05_RS21000 4212616 4212816 - hypothetical protein gene gene4188 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21000 SH05_RS21005 SH05_21020 SH05_RS21005 4212826 4214631 - glutathione-regulated potassium-efflux system protein KefB involved in potassium efflux gene gene4189 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21005 SH05_RS21010 SH05_21025 SH05_RS21010 4214631 4215182 - potassium transporter required for KefB activity gene gene4190 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21010 SH05_RS21015 SH05_21030 SH05_RS21015 4215313 4217226 + ABC transporter ATP-binding protein gene gene4191 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21015 SH05_RS21020 SH05_21035 SH05_RS21020 4217226 4218248 + UPF0017 family hydrolase gene gene4192 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21020 SH05_RS21025 SH05_21040 SH05_RS21025 4218242 4218460 + hypothetical protein gene gene4193 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21025 SH05_RS21030 SH05_21045 SH05_RS21030 4218514 4219383 + phosphoribulokinase gene gene4194 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21030 SH05_RS21035 SH05_21050 SH05_RS21035 4219438 4219842 - hypothetical protein gene gene4195 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21035 SH05_RS21040 SH05_21055 SH05_RS21040 4219922 4220137 + hypothetical protein gene gene4196 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21040 SH05_RS21045 SH05_21060 SH05_RS21045 4220144 4220776 + cAMP-activated global transcriptional regulator CRP cAMP receptor protein%3B complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons gene gene4197 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21045 SH05_RS21050 SH05_21065 SH05_RS21050 4220827 4222917 + hypothetical protein gene gene4198 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21050 SH05_RS21055 SH05_21070 argD argD 4222984 4224204 - acetylornithine aminotransferase DapATase%3B bifunctional enzyme that functions in arginine and lysine biosynthetic pathways%3B catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2%2C6-diaminoheptanedioate gene gene4199 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21055 SH05_RS21060 SH05_21075 SH05_RS21060 4224290 4224853 - aminodeoxychorismate synthase TrpG%3B with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine%3B TrpG provides the glutamine amidotransferase activity gene gene4200 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21060 SH05_RS21065 SH05_21080 SH05_RS21065 4224885 4225487 - adenosine monophosphate-protein transferase gene gene4201 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21065 SH05_RS21070 SH05_21085 SH05_RS21070 4225477 4225644 - antitoxin gene gene4202 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21070 SH05_RS21075 SH05_21090 SH05_RS21075 4225749 4226321 - peptidyl-prolyl cis-trans isomerase gene gene4203 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21075 SH05_RS21080 SH05_21095 SH05_RS21080 4226592 4227773 + protein TsgA gene gene4204 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21080 SH05_RS21085 SH05_21100 SH05_RS21085 4228035 4230578 + nitrite reductase (NADH) large subunit gene gene4205 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21085 SH05_RS21090 SH05_21105 nirD nirD 4230575 4230901 + nitrite reductase (NADH) small subunit involved in reducing nitrite to ammonium to detoxify nitrite accumulation in anaerobic nitrate-respiring cells and regenerate NAD+%3B bounds to NirB%2C the cytoplasmic subunit%2C whose expression is induced at high nitrate concentrations gene gene4206 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21090 SH05_RS21095 SH05_21110 SH05_RS21095 4231027 4231833 + nitrite transporter NirC member of the FNT family of formate and nitrite transporters gene gene4207 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21095 SH05_RS21100 SH05_21115 cysG cysG 4231852 4233225 + siroheme synthase multifunction enzyme consisting of uroporphyrin-III C-methyltransferase%2C precorrin-2 dehydrogenase and sirohydrochlorin ferrochelatase%3B catalyzes the methylation of uroporphyrinogen III to form precorrin-2%2C then catalyzes formation of sirohydrochlorin from precorrin-2 and finally catalyzed the formation of siroheme from sirohydrochlorin gene gene4208 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21100 SH05_RS21105 SH05_21120 SH05_RS21105 4233472 4233639 + lipoprotein gene gene4209 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21105 SH05_RS21110 SH05_21125 frlA frlA 4233934 4235271 + fructoselysine transporter inner membrane protein possibly involved in fructoselysine transport%3B member of the flr operon gene gene4210 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21110 SH05_RS21115 SH05_21130 frlB frlB 4235292 4236314 + fructoselysine 6-phosphate deglycase catalyzes the conversion of fructoselysine 6-phosphate to glucose 6-phosphate and lysine gene gene4211 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21115 SH05_RS21120 SH05_21135 SH05_RS21120 4236364 4237194 + protein FrlC YhfOP%3B YhfP%3B YhfO%3B FrlC%3B catalyzes the interconversion of fructoselysine and psicoselysine gene gene4212 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21120 SH05_RS21125 SH05_21140 SH05_RS21125 4237191 4237976 + fructoselysine kinase gene gene4213 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21125 SH05_RS21130 SH05_21145 SH05_RS21130 4238076 4238807 + transcriptional regulator may act as a transcriptional regulator of a putative fructoselysine-induced operon containing the yhfM%2C yhfN%2C yhfO%2C yhfP%2C yhfQ%2C and yhfR genes gene gene4214 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21130 SH05_RS21135 SH05_21150 SH05_RS21135 4238959 4240044 - FNR-regulated pyridoxal phosphate-dependent aminotransferase gene gene4215 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21135 SH05_RS21140 SH05_21155 SH05_RS21140 4240056 4241360 - hypothetical protein gene gene4216 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21140 SH05_RS21145 SH05_21160 SH05_RS21145 4241372 4241725 - DUF2620 domain-containing protein gene gene4217 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21145 SH05_RS21150 SH05_21165 SH05_RS21150 4241736 4242614 - phosphotriesterase homology protein phosphotriesterase homology protein%3B PhP%3B YhfV%3B member of a family of proteins related to phosphotriesterase (PTE) gene gene4218 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21150 SH05_RS21155 SH05_21170 SH05_RS21155 4242611 4243837 - phosphopentomutase-related metalloenzyme superfamily protein gene gene4219 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21155 SH05_RS21160 SH05_21175 SH05_RS21160 4243837 4245000 - pyridoxal 5''-phosphate binding protein gene gene4220 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21160 SH05_RS21165 SH05_21180 SH05_RS21165 4245084 4245446 - PRD domain protein gene gene4221 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21165 SH05_RS21170 SH05_21185 SH05_RS21170 4245463 4246368 - transcriptional regulator gene gene4222 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21170 SH05_RS21175 SH05_21190 SH05_RS21175 4246658 4247662 - tryptophan--tRNA ligase gene gene4223 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21175 SH05_RS21180 SH05_21195 SH05_RS21180 4247655 4248413 - phosphoglycolate phosphatase catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate gene gene4224 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21180 SH05_RS21185 SH05_21200 SH05_RS21185 4248406 4249083 - ribulose-phosphate 3-epimerase gene gene4225 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21185 SH05_RS21190 SH05_21205 SH05_RS21190 4249101 4249937 - DNA adenine methylase gene gene4226 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21190 SH05_RS21195 SH05_21210 SH05_RS21195 4250044 4251330 - protein DamX binds the septal ring gene gene4227 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21195 SH05_RS21200 SH05_21215 aroB aroB 4251422 4252510 - 3-dehydroquinate synthase catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate%3B functions in aromatic amino acid biosynthesis gene gene4228 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21200 SH05_RS21205 SH05_21220 aroK aroK 4252567 4253088 - shikimate kinase type I enzyme similar to type II but differentially regulated%3B major shikimate kinase in fully repressed cells%3B catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis gene gene4229 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21205 SH05_RS21210 SH05_21225 hofQ hofQ 4253489 4254649 - porin outer membrane porin probably involved in uptake of extracellular double-stranded DNA%3B similar to outer membrane competence protein ComE from Haemophilus influenzae and outer membrane protein PilQ involved in type IV pilus production from Pseudomonas aeruginosa gene gene4230 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21210 SH05_RS21215 SH05_21230 SH05_RS21215 4254639 4255043 - DNA catabolic protein gene gene4231 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21215 SH05_RS21220 SH05_21235 SH05_RS21220 4255033 4255473 - DNA catabolic protein gene gene4232 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21220 SH05_RS21225 SH05_21240 SH05_RS21225 4255457 4255996 - DNA utilization protein HofN gene gene4233 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21225 SH05_RS21230 SH05_21245 SH05_RS21230 4255996 4256775 - DNA catabolic pilus assembly protein gene gene4234 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21230 SH05_RS21235 SH05_21250 mrcA mrcA 4256895 4259447 + penicillin-binding protein 1A bifunctional murein transglycosylase/murein transpeptidase%3B penicillin-binding protein 1A%3B involved in the synthesis of cross-linked peptidoglycan from the lipid intermediates in cell wall formation%3B penicillin-insensitive transglycosylase catalyzes the formation of linear glycan strands and the penicillin-sensitive transpeptidase catalyzes the cross-linking of the peptide subunits gene gene4235 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21235 SH05_RS21240 SH05_21255 nudE nudE 4259613 4260173 - ADP compounds hydrolase NudE ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose gene gene4236 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21240 SH05_RS21245 SH05_21260 SH05_RS21245 4260493 4262628 + RcsCDB-response attenuator%2C inner membrane protein gene gene4237 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21245 SH05_RS21250 SH05_21265 SH05_RS21250 4262693 4263361 + GMP/IMP nucleotidase YrfG gene gene4238 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21250 SH05_RS21255 SH05_21270 SH05_RS21255 4263372 4263773 + heat-shock protein 15 gene gene4239 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21255 SH05_RS21260 SH05_21275 hslO hslO 4263798 4264676 + heat-shock protein Hsp33 becomes active under oxidative stress%3B four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive%3B oxidative stress results in oxidized cysteines%2C release of zinc%2C and binding of Hsp33 to aggregation-prone proteins%3B forms dimers and higher order oligomers gene gene4240 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21260 SH05_RS21265 SH05_21280 SH05_RS21265 4264739 4266463 - DUF4153 domain-containing protein gene gene4241 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21265 SH05_RS21270 SH05_21285 SH05_RS21270 4266539 4266670 - hypothetical protein gene gene4242 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21270 SH05_RS21275 SH05_21290 SH05_RS21275 4266842 4268464 + phosphoenolpyruvate carboxykinase [ATP] PEP carboxykinase%3B PEP carboxylase%3B PEPCK%3B catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP gene gene4243 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21275 SH05_RS21280 SH05_21295 envZ envZ 4268540 4269892 - two-component system sensor histidine kinase membrane-localized osmosensor%3B histidine kinase%3B in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR gene gene4244 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21280 SH05_RS21285 SH05_21300 ompR ompR 4269889 4270608 - two-component system response regulator part of two-component system EnvZ/OmpR%3B regulates transcription of outer membrane porin genes ompC/F%3B under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR%3B the result is increased expression of ompC and repression of ompF%3B also functions in regulation of other genes%3B forms dimers upon phosphorylation gene gene4245 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21285 SH05_RS21290 SH05_21305 greB greB 4270836 4271312 + transcription elongation factor GreB necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites%3B arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through%2C resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus gene gene4246 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21290 SH05_RS21295 SH05_21310 SH05_RS21295 4271409 4273730 + hypothetical protein gene gene4247 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21295 SH05_RS21300 SH05_21315 feoA feoA 4274187 4274414 + ferrous iron transporter A gene gene4248 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21300 SH05_RS21305 SH05_21320 feoB feoB 4274431 4276752 + ferrous iron transporter B cytoplasmic membrane ferrous uptake system permease%3B mutations disrupt the ability of Escherichia coli to take up ferrous iron%3B GTP-binding protein which requires GTP for efficient iron(II) uptake gene gene4249 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21305 SH05_RS21310 SH05_21325 SH05_RS21310 4276752 4276988 + ferrous iron transporter C regulatory protein that controls transcription of feoABC genes gene gene4250 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21310 SH05_RS21315 SH05_21330 SH05_RS21315 4277191 4278069 + transposase gene gene4251 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21315 SH05_RS21320 SH05_21335 SH05_RS21320 4278098 4278868 - pimeloyl-[acyl-carrier protein] methyl ester esterase Shows carboxylesterase activity with a preference for short chain fatty acid esters%3B involved in pimeloyl-CoA synthesis gene gene4252 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21320 SH05_RS21325 SH05_21340 SH05_RS21325 4278906 4279589 + protein GntX required for utilization of DNA as the sole source of carbon and energy gene gene4253 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21325 SH05_RS21330 SH05_21345 SH05_RS21330 4279648 4280223 + fe/S biogenesis protein nfuA cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source gene gene4254 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21330 SH05_RS21335 SH05_21350 SH05_RS21335 4280583 4281899 + gluconate transporter gene gene4255 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21335 SH05_RS21340 SH05_21355 malQ malQ 4282010 4284094 - 4-alpha-glucanotransferase amylomaltase%3B acts to release glucose from maltodextrins gene gene4256 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21340 SH05_RS21345 SH05_21360 SH05_RS21345 4284104 4286497 - maltodextrin phosphorylase gene gene4257 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21345 SH05_RS21350 SH05_21365 SH05_RS21350 4287109 4289814 + transcriptional regulator Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides gene gene4258 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21350 SH05_RS21355 SH05_21370 SH05_RS21355 4289857 4290873 - RNA 3'-terminal phosphate cyclase catalyzes the conversion of terminal3'-phosphate of RNA to the 2'%2C3'-cyclicphosphodiester gene gene4259 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21355 SH05_RS21360 SH05_21375 SH05_RS21360 4290877 4292103 - RNA-splicing ligase RtcB gene gene4260 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21360 SH05_RS21365 SH05_21380 SH05_RS21365 4292292 4293890 + transcriptional regulator sigma 54-dependent%3B regulates genes involved in forming a 2'%2C3'-cyclic phosphodiester on RNA gene gene4261 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21365 SH05_RS21370 SH05_21385 SH05_RS21370 4293872 4294630 - glycerol-3-phosphate regulon repressor represses the glpD%2C glpFK%2C glpTQ%2C and glpACB operons involved in glycerol-3-phosphate metabolism gene gene4262 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21370 SH05_RS21375 SH05_21390 SH05_RS21375 4294647 4295477 - rhomboid protease GlpG protease responsible for the cleavage between Ser and Asp residues of proteins in regions of high local hydrophilicity gene gene4263 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21375 SH05_RS21380 SH05_21395 glpE glpE 4295522 4295848 - thiosulfate sulfurtransferase GlpE belongs to rhodanese family%3B thiosulfate thiotransferase%3B in Escherichia coli this enzyme catalyzes the formation of thiocyanate from thiosulfate and cyanide with low efficiency%3B contains an active site cysteine gene gene4264 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21380 SH05_RS21385 SH05_21400 glpD glpD 4296038 4297543 + aerobic glycerol-3-phosphate dehydrogenase in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions%3B anaerobic expression is repressed by the arcAB system%3B converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8%3B associates with the cytoplasmic membrane gene gene4265 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21385 SH05_RS21390 SH05_21405 SH05_RS21390 4297749 4297940 - membrane protein gene gene4266 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21390 SH05_RS21395 SH05_21410 SH05_RS21395 4298159 4300606 - glycogen phosphorylase gene gene4267 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21395 SH05_RS21400 SH05_21415 glgA glgA 4300625 4302058 - glycogen synthase catalyzes the formation of alpha-1%2C4-glucan chains from ADP-glucose gene gene4268 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21400 SH05_RS21405 SH05_21420 glgC glgC 4302058 4303353 - glucose-1-phosphate adenylyltransferase catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate gene gene4269 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21405 SH05_RS21410 SH05_21425 SH05_RS21410 4303371 4305344 - glycogen debranching protein catalyzes the hydrolysis of the alpha-1%2C6-glucosidic linkages in partially depolymerized glycogen gene gene4270 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21410 SH05_RS21415 SH05_21430 SH05_RS21415 4305341 4307527 - 1%2C4-alpha-glucan-branching protein gene gene4271 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21415 SH05_RS21420 SH05_21435 SH05_RS21420 4307800 4308903 - aspartate-semialdehyde dehydrogenase catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde gene gene4272 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21420 SH05_RS21425 SH05_21440 SH05_RS21425 4309096 4309689 + membrane protein gene gene4273 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21425 SH05_RS21430 SH05_21445 SH05_RS21430 4309746 4311086 - low-affinity gluconate transporter gene gene4274 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21430 SH05_RS21435 SH05_21450 gntK gntK 4311090 4311617 - thermoresistant gluconokinase thermoresistant%3B catalyzes the formation of 6-phospho-D-gluconate from gluconate gene gene4275 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21435 SH05_RS21440 SH05_21455 SH05_RS21440 4311756 4312751 - GntR family transcriptional regulator gene gene4276 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21440 SH05_RS21445 SH05_21460 SH05_RS21445 4312975 4313670 - quercetin 2%2C3-dioxygenase gene gene4277 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21445 SH05_RS21450 SH05_21465 SH05_RS21450 4313793 4314830 - oxidoreductase gene gene4278 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21450 SH05_RS21455 SH05_21470 SH05_RS21455 4315163 4315651 + aminoacyl nucleotide detoxifying acetyltransferase YhhY%3B regulated by the fur regulator%3B unknown function gene gene4279 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21455 SH05_RS21460 SH05_21475 SH05_RS21460 4315888 4317066 + colicin gene gene4280 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21460 SH05_RS21465 SH05_21480 SH05_RS21465 4317063 4317479 + hypothetical protein gene gene4281 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21465 SH05_RS21470 SH05_21485 SH05_RS21470 4317702 4318205 + transposase gene gene4282 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21470 SH05_RS21475 SH05_21490 SH05_RS21475 4318784 4319068 + heat-shock protein gene gene4283 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21475 SH05_RS21480 SH05_21495 ggt ggt 4319106 4320848 - gamma-glutamyltranspeptidase periplasmic enzyme%3B post-translationally processed into two subunits which are required for wild-type enzyme activity%3B cleaves the gammaglutamyl linkages of compounds such as glutathione and transfer the gammaglutamyl group to other amino acids and peptides gene gene4284 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21480 SH05_RS21485 SH05_21500 SH05_RS21485 4320968 4321408 + DUF2756 domain-containing protein gene gene4285 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21485 SH05_RS21490 SH05_21505 ugpQ ugpQ 4321395 4322138 - glycerophosphoryl diester phosphodiesterase hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol%3B induced when cells are starved for inorganic phosphate gene gene4286 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21490 SH05_RS21495 SH05_21510 ugpC ugpC 4322135 4323205 - sn-glycerol-3-phosphate import ATP-binding protein UgpC part of the UgpABCE glycerol-3-phosphate uptake system gene gene4287 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21495 SH05_RS21500 SH05_21515 SH05_RS21500 4323207 4324052 - sn-glycerol 3-phosphate ABC transporter permease with UgpABC is involved in uptake of glycerol-3-phosphate gene gene4288 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21500 SH05_RS21505 SH05_21520 SH05_RS21505 4324049 4324936 - sn-glycerol 3-phosphate ABC transporter permease with UgpEC is involved in the uptake of glycerol-3-phosphate gene gene4289 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21505 SH05_RS21510 SH05_21525 SH05_RS21510 4325034 4326350 - sn-glycerol-3-phosphate-binding periplasmic protein UgpB with UgpACE is involved in the uptake of glycerol-3-phosphate gene gene4290 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21510 SH05_RS21515 SH05_21530 SH05_RS21515 4326585 4326713 - hypothetical protein gene gene4291 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21515 SH05_RS21520 SH05_21535 livF livF 4326749 4327462 - branched-chain amino acid ABC transporter ATP-binding protein with LivGHMJ and LivGHMK is part of the high-affinity branched-chain amino acid transport system%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine gene gene4292 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21520 SH05_RS21525 SH05_21540 livG livG 4327464 4328231 - branched-chain amino acid ABC transporter ATP-binding protein Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine gene gene4293 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21525 SH05_RS21530 SH05_21545 livM livM 4328228 4329505 - branched-chain amino acid ABC transporter permease Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine gene gene4294 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21530 SH05_RS21535 SH05_21550 SH05_RS21535 4329502 4330428 - branched-chain amino acid ABC transporter permease LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter gene gene4295 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21535 SH05_RS21540 SH05_21555 SH05_RS21540 4330476 4331585 - leucine-specific-binding protein with LivFGHM is involved in the high affinity leucine transport gene gene4296 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21540 SH05_RS21545 SH05_21560 SH05_RS21545 4332009 4332392 + pantothenate synthesis PanD autocleavage accelerator gene gene4297 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21545 SH05_RS21550 SH05_21565 SH05_RS21550 4332402 4332524 + hypothetical protein gene gene4298 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21550 SH05_RS21555 SH05_21570 SH05_RS21555 4332580 4333698 - amino acid ABC transporter substrate-binding protein with LivFGHM is involved in the high affinity leucine transport gene gene4299 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21555 SH05_RS21560 SH05_21575 SH05_RS21560 4333954 4334808 - RNA polymerase sigma factor RpoH binds with the catalytic core of RNA polymerase to produce the holoenzyme%3B this sigma factor is responsible for the expression of heat shock promoters gene gene4300 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21560 SH05_RS21565 SH05_21580 ftsX ftsX 4335053 4336111 - cell division protein FtsX ABC transporter%2C membrane protein gene gene4301 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21565 SH05_RS21570 SH05_21585 SH05_RS21570 4336104 4336772 - cell division ATP-binding protein FtsE ATP-binding protein of an ATP-binding cassette transporter%3B when bound to FtsX%2C FtsEX localizes to the cell division site and plays a role in the assembly or stability of the septal ring under low-salt growth conditions gene gene4302 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21570 SH05_RS21575 SH05_21590 SH05_RS21575 4336775 4338268 - signal recognition particle receptor FtsY cell division protein%3B signal recognition protein receptor%3B functions in the targeting and insertion of membrane proteins gene gene4303 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21575 SH05_RS21580 SH05_21595 rsmD rsmD 4338418 4339014 + ribosomal RNA small subunit methyltransferase D catalyzes the methylation of 16S rRNA at position G966 gene gene4304 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21580 SH05_RS21585 SH05_21600 SH05_RS21585 4339004 4339273 + DUF1145 domain-containing protein gene gene4305 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21585 SH05_RS21590 SH05_21605 SH05_RS21590 4339276 4339635 - DUF2500 domain-containing protein gene gene4306 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21590 SH05_RS21595 SH05_21610 SH05_RS21595 4339776 4340402 + membrane protein gene gene4307 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21595 SH05_RS21600 SH05_21615 zntA zntA 4340476 4342674 + cadmium-transporting ATPase P-type ATPase involved in the export of lead%2C cadmium%2C zinc and mercury gene gene4308 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21600 SH05_RS21605 SH05_21620 SH05_RS21605 4342776 4343021 - sulfurtransferase TusA TusA%3B transfers sulfur to TusBCD complex%3B involved in thiouridation of U34 position of some tRNAs gene gene4309 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21605 SH05_RS21610 SH05_21625 SH05_RS21610 4343242 4343907 + hypothetical protein gene gene4310 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21610 SH05_RS21615 SH05_21630 SH05_RS21615 4343980 4344537 + protein DcrB gene gene4311 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21615 SH05_RS21620 SH05_21635 SH05_RS21620 4344541 4345758 - arabinose efflux transporter gene gene4312 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21620 SH05_RS21625 SH05_21640 SH05_RS21625 4345890 4346939 + pheromone autoinducer 2 transporter gene gene4313 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21625 SH05_RS21630 SH05_21645 SH05_RS21630 4346994 4347581 + 4'-phosphopantetheinyl transferase gene gene4314 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21630 SH05_RS21635 SH05_21650 SH05_RS21635 4347692 4349266 + nickel-binding periplasmic protein gene gene4315 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21635 SH05_RS21640 SH05_21655 SH05_RS21640 4349266 4350210 + nickel ABC transporter permease with NikACDE is involved in nickel transport into the cell gene gene4316 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21640 SH05_RS21645 SH05_21660 nikC nikC 4350207 4351040 + nickel ABC transporter permease with NikABDE is involved in nickel transport into the cell gene gene4317 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21645 SH05_RS21650 SH05_21665 nikD nikD 4351040 4351804 + nickel ABC transporter ATP-binding protein with NikABCE is involved in nickel transport into the cell gene gene4318 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21650 SH05_RS21655 SH05_21670 nikE nikE 4351801 4352607 + nickel import ATP-binding protein NikE with NikABCD is involved with nickel transport into the cell gene gene4319 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21655 SH05_RS21660 SH05_21675 SH05_RS21660 4352613 4353014 + nickel-responsive regulator Inhibits transcription at high concentrations of nickel gene gene4320 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21660 SH05_RS21665 SH05_21680 SH05_RS21665 4353217 4357452 + RHS element protein gene gene4321 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21665 SH05_RS21670 SH05_21685 SH05_RS21670 4357424 4357807 + hypothetical protein gene gene4322 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21670 SH05_RS21675 SH05_RS21675 SH05_RS21675 4357912 4358262 + lyase gene gene4323 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21675 SH05_RS21680 SH05_21695 SH05_RS21680 4358403 4359539 + H repeat-associated protein YhhI gene gene4324 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21680 SH05_RS21685 SH05_21700 SH05_RS21685 4359704 4360828 - inner membrane transport permease YhhJ gene gene4325 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21685 SH05_RS21690 SH05_21705 SH05_RS21690 4360828 4363563 - ribosome-associated ATPase gene gene4326 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21690 SH05_RS21695 SH05_21710 SH05_RS21695 4363560 4364627 - membrane fusion protein (MFP) of efflux pump gene gene4327 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21695 SH05_RS21700 SH05_21715 SH05_RS21700 4364993 4366615 - hypothetical protein gene gene4328 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21700 SH05_RS21705 SH05_RS21705 SH05_RS21705 4366877 4368483 - hypothetical protein gene gene4329 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21705 SH05_RS21710 SH05_21725 SH05_RS21710 4368470 4368673 - hypothetical protein gene gene4330 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21710 SH05_RS21715 SH05_21730 SH05_RS21715 4368796 4368894 - hypothetical protein gene gene4331 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21715 SH05_RS21720 SH05_21735 SH05_RS21720 4368911 4369918 + membrane protein gene gene4332 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21720 SH05_RS21725 SH05_21740 SH05_RS21725 4370233 4371435 - oxidoreductase gene gene4333 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21725 SH05_RS21730 SH05_21745 SH05_RS21730 4371667 4373166 + Low-affinity inorganic phosphate transporter 1 involved in the transport of inorganic phosphate gene gene4334 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21730 SH05_RS21735 SH05_21750 SH05_RS21735 4373410 4373745 - universal stress protein B ppGpp-dependent%2C membrane associated%2C stress protein produced under conditions of nutrient deprivation%2C osmotic shock and oxidative stress gene gene4335 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21735 SH05_RS21740 SH05_21755 SH05_RS21740 4374136 4374570 + universal stress protein A involved in resistance to DNA-damaging agents gene gene4336 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21740 SH05_RS21745 SH05_21760 tppB tppB 4374887 4376356 + dipeptide and tripeptide permease B mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium%3B member of proton-dependent oligopeptide transport (POT) system family%3B in Escherichia coli this gene is regulated by OmpR although not via osmoregulation gene gene4337 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21745 SH05_RS21750 SH05_21765 SH05_RS21750 4376405 4377157 - ribosomal RNA small subunit methyltransferase J predicted SAM-dependent methyltransferase gene gene4338 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21750 SH05_RS21755 SH05_21770 SH05_RS21755 4377165 4379207 - oligopeptidase A gene gene4339 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21755 SH05_RS21760 SH05_21775 SH05_RS21760 4379410 4380252 + ribosomal RNA large subunit methyltransferase J gene gene4340 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21760 SH05_RS21765 SH05_21780 SH05_RS21765 4380324 4381676 + glutathione reductase catalyzes the reduction of 2 glutathione to glutathione disulfide%3B maintains high levels of reduced glutathione in the cytosol%3B involved in redox regulation and oxidative defense gene gene4341 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21765 SH05_RS21770 SH05_21785 SH05_RS21770 4381730 4381846 - hypothetical protein gene gene4342 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21770 SH05_RS21775 SH05_21790 SH05_RS21775 4381841 4382014 + hypothetical protein gene gene4343 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21775 SH05_RS21780 SH05_21795 SH05_RS21780 4382553 4382906 + arsenical resistance operon repressor regulates the expression of of the arsRBC involved in resistance to arsenic gene gene4344 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21780 SH05_RS21785 SH05_21800 SH05_RS21785 4382960 4384249 + arsenical pump membrane protein gene gene4345 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21785 SH05_RS21790 SH05_21805 SH05_RS21790 4384262 4384687 + arsenate reductase gene gene4346 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21790 SH05_RS21795 SH05_21810 SH05_RS21795 4385316 4386098 + hypothetical protein gene gene4347 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21795 SH05_RS21800 SH05_21815 SH05_RS21800 4386207 4387187 - transposase gene gene4348 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21800 SH05_RS21805 SH05_RS21805 SH05_RS21805 4387253 4387738 + hypothetical protein gene gene4349 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21805 SH05_RS21810 SH05_21825 SH05_RS21810 4387986 4388552 + outer membrane protein slp gene gene4350 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21810 SH05_RS21815 SH05_21830 SH05_RS21815 4388708 4389238 + transcriptional regulator gene gene4351 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21815 SH05_RS21820 SH05_21835 SH05_RS21820 4389280 4389927 - magnesium transporter ATPase gene gene4352 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21820 SH05_RS21825 SH05_21840 hdeB hdeB 4389991 4390317 - acid stress chaperone HdeB gene gene4353 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21825 SH05_RS21830 SH05_21845 SH05_RS21830 4390433 4390765 - acid stress chaperone HdeA inactive form gene gene4354 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21830 SH05_RS21835 SH05_21850 SH05_RS21835 4391020 4391592 + protein HdeD gene gene4355 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21835 SH05_RS21840 SH05_21855 SH05_RS21840 4392391 4392918 + transcriptional regulator GadE gene gene4356 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21840 SH05_RS21845 SH05_21860 SH05_RS21845 4392919 4393197 - hypothetical protein gene gene4357 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21845 SH05_RS21850 SH05_21865 SH05_RS21850 4393257 4394414 + multidrug resistance protein MdtE gene gene4358 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21850 SH05_RS21855 SH05_21870 SH05_RS21855 4394439 4397552 + multidrug efflux RND transporter permease subunit gene gene4359 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21855 SH05_RS21860 SH05_21875 SH05_RS21860 4397915 4398643 - transcriptional regulator gene gene4360 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21860 SH05_RS21865 SH05_21880 SH05_RS21865 4399011 4399835 - transcriptional regulator regulates genes in response to acid and/or during stationary phase gene gene4361 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21865 SH05_RS21870 SH05_21885 SH05_RS21870 4400205 4401605 - glutamate decarboxylase alpha gene gene4362 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21870 SH05_RS21875 SH05_21890 SH05_RS21875 4401816 4403213 - cytochrome c peroxidase gene gene4363 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21875 SH05_RS21880 SH05_21895 treF treF 4403617 4405266 + trehalase cytoplasmic%3B catalyzes the hydrolysis of trehalose to glucose gene gene4364 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21880 SH05_RS21885 SH05_21900 SH05_RS21885 4405317 4405919 - LuxR family transcriptional regulator gene gene4365 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21885 SH05_RS21890 SH05_21905 SH05_RS21890 4406439 4407338 + LysR family transcriptional regulator gene gene4366 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21890 SH05_RS21895 SH05_21910 SH05_RS21895 4407387 4408400 + hypothetical protein gene gene4367 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21895 SH05_RS21900 SH05_21915 SH05_RS21900 4408811 4410133 + metabolite transporter gene gene4368 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21900 SH05_RS21905 SH05_21920 SH05_RS21905 4410315 4412375 - hypothetical protein gene gene4369 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21905 SH05_RS21910 SH05_21925 SH05_RS21910 4412445 4413212 - cyclic di-GMP phosphodiesterase YhjH in Escherichia coli this protein is involved in flagellar function gene gene4370 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21910 SH05_RS21915 SH05_21930 SH05_RS21915 4413166 4413360 + hypothetical protein gene gene4371 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21915 SH05_RS21920 SH05_21935 SH05_RS21920 4413444 4414373 + 2-dehydro-3-deoxygluconokinase catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate-6-phosphate from 2-dehydro-3-deoxy-D-gluconate gene gene4372 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21920 SH05_RS21925 SH05_21940 SH05_RS21925 4414469 4415965 - hypothetical protein gene gene4373 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21925 SH05_RS21930 SH05_21945 SH05_RS21930 4416186 4417472 - C4-dicarboxylate ABC transporter involved in the transport of C4-dicarboxylates across the membrane gene gene4374 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21930 SH05_RS21935 SH05_21950 SH05_RS21935 4417655 4419610 - biofilm formation regulator HmsP HmsP in Yersinia pestis plays a role in invasion of epithelial cells%3B the EAL-domain portion of HmsP from Y. pestis shows phosphodiesterase activity which is required for the inhibition of biofilm formation%3B inner membrane protein gene gene4375 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21935 SH05_RS21940 SH05_21955 SH05_RS21940 4419725 4423198 - cellulose synthase operon protein C cellulose is produced by the multicellular morphotypes of E. coli and Salmonella typhimurium%3B the cellulose biosynthesis genes bcsA%2C bcsB%2C bcsZ and bcsC are constitutively transcribed%2C however%2C cellulose synthesis is dependent on the expression of adrA gene gene4376 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21940 SH05_RS21945 SH05_21960 SH05_RS21945 4423180 4424286 - endoglucanase catalyzes the hydrolysis of 1%2C4-beta-D-glucosidic linkages in cellulose%2C lichenin and cereal beta-D-glucans gene gene4377 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21945 SH05_RS21950 SH05_21965 SH05_RS21950 4424293 4426632 - cyclic di-GMP-binding protein binds the cellulose synthase activator%2C bis-(3'-5') cyclic diguanylic acid (c-di-GMP) gene gene4378 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21950 SH05_RS21955 SH05_21970 bcsA bcsA 4426643 4429261 - cellulose synthase catalytic subunit [UDP-forming] polymerizes uridine 5'-diphosphate glucose to cellulose%3B acts with BcsB%2C BcsZ and BcsC in cellulose biosynthesis gene gene4379 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21955 SH05_RS21960 SH05_21975 SH05_RS21960 4429258 4429929 - cell division protein gene gene4380 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21960 SH05_RS21965 SH05_21980 SH05_RS21965 4430022 4430210 - hypothetical protein gene gene4381 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21965 SH05_RS21970 SH05_21985 SH05_RS21970 4430601 4431581 - transposase gene gene4382 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21970 SH05_RS21975 SH05_21990 SH05_RS21975 4431694 4433253 + cellulose biosynthesis protein BcsE required for cellulose biosynthesis gene gene4383 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21975 SH05_RS21980 SH05_21995 SH05_RS21980 4433250 4433441 + protein BcsF gene gene4384 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21980 SH05_RS21985 SH05_22000 SH05_RS21985 4433438 4435117 + protein BcsG gene gene4385 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21985 SH05_RS21990 SH05_RS21990 SH05_RS21990 4435204 4435311 - small toxic polypeptide LdrD gene gene4386 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21990 SH05_RS21995 SH05_22010 SH05_RS21995 4435476 4435637 - hypothetical protein gene gene4387 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS21995 SH05_RS22000 SH05_22015 SH05_RS22000 4435787 4437058 + transporter gene gene4388 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22000 SH05_RS22005 SH05_22020 dppF dppF 4437088 4438092 - dipeptide transport ATP-binding protein DppF Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides gene gene4389 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22005 SH05_RS22010 SH05_22025 dppD dppD 4438089 4439072 - dipeptide transport ATP-binding protein DppD DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF gene gene4390 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22010 SH05_RS22015 SH05_22030 SH05_RS22015 4439083 4439985 - peptide ABC transporter permease gene gene4391 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22015 SH05_RS22020 SH05_22035 SH05_RS22020 4439995 4441014 - peptide ABC transporter permease gene gene4392 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22020 SH05_RS22025 SH05_22040 SH05_RS22025 4441032 4441259 + hypothetical protein gene gene4393 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22025 SH05_RS22030 SH05_22045 SH05_RS22030 4441322 4442929 - periplasmic dipeptide transporter DppABCDF is involved in the transport of dipeptides%3B also binds heme and mediates chemotaxis to dipeptides gene gene4394 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22030 SH05_RS22035 SH05_22050 SH05_RS22035 4443281 4443541 - hypothetical protein gene gene4395 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22035 SH05_RS22040 SH05_22055 SH05_RS22040 4443840 4443916 - tRNA-Pro tRNA gene4396 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22040 SH05_RS22045 SH05_22060 SH05_RS22045 4444008 4445699 - phosphoethanolamine transferase EptB catalyzes the addition of a phosphoethanolamine group to the outer Kdo residue of lipopolysaccharide gene gene4397 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22045 SH05_RS22050 SH05_22065 SH05_RS22050 4446023 4447231 - pyruvate-inducible inner membrane protein transporter gene gene4398 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22050 SH05_RS22055 SH05_22070 SH05_RS22055 4447460 4448158 - autotransporter beta-domain protein gene gene4399 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22055 SH05_RS22060 SH05_22075 SH05_RS22060 4448316 4448879 + DNA-3-methyladenine glycosylase 1 gene gene4400 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22060 SH05_RS22065 SH05_22080 SH05_RS22065 4448876 4449316 + GNAT family acetyltransferase gene gene4401 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22065 SH05_RS22070 SH05_22085 SH05_RS22070 4449285 4451564 - biotin sulfoxide reductase catalyzes the reduction of trimethylamine-N-oxide to form trimethylamine gene gene4402 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22070 SH05_RS22075 SH05_22090 SH05_RS22075 4451771 4452430 + lipoprotein gene gene4403 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22075 SH05_RS22080 SH05_22095 SH05_RS22080 4452534 4453508 + glyoxylate/hydroxypyruvate reductase B catalyzes the formation of glycolate from glyoxylate and glycerate from hydroxypyruvate gene gene4404 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22080 SH05_RS22085 SH05_22100 SH05_RS22085 4453558 4454268 - DUF3053 domain-containing protein gene gene4405 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22085 SH05_RS22090 SH05_22105 SH05_RS22090 4454702 4454992 + transcriptional regulator gene gene4406 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22090 SH05_RS22095 SH05_22110 SH05_RS22095 4455273 4455485 + cold-shock protein gene gene4407 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22095 SH05_RS22100 SH05_22115 SH05_RS22100 4455672 4455824 - protein HokA gene gene4408 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22100 SH05_RS22105 SH05_22120 SH05_RS22105 4455904 4456425 + transposase gene gene4409 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22105 SH05_RS22110 SH05_22125 SH05_RS22110 4456422 4457273 + transposase gene gene4410 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22110 SH05_RS22115 SH05_22130 glyS glyS 4457552 4459621 - glycine--tRNA ligase subunit beta glycine--tRNA ligase beta chain%3B glyS%3B class II aminoacyl tRNA synthetase%3B tetramer of alpha(2)beta(2)%3B catalyzes a two-step reaction%3B first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP%3B second by transfer of the aminoacyl-adenylate to its tRNA gene gene4411 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22115 SH05_RS22120 SH05_22135 SH05_RS22120 4459631 4460542 - glycine--tRNA ligase subunit alpha gene gene4412 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22120 SH05_RS22125 SH05_22140 SH05_RS22125 4460637 4460936 - hypothetical protein gene gene4413 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22125 SH05_RS22130 SH05_22145 SH05_RS22130 4461111 4462106 + hypothetical protein involved in enterobacterial common antigen biosynthesis%3B catalyzes the addition of O-acetyl groups to the N-acetyl-D-glucosamine residues of the trisaccharide repeat units of the enterobacterial common antigen gene gene4414 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22130 SH05_RS22135 SH05_22150 SH05_RS22135 4462148 4462585 - hypothetical protein gene gene4415 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22135 SH05_RS22140 SH05_22155 SH05_RS22140 4462631 4462972 - hypothetical protein gene gene4416 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22140 SH05_RS22145 SH05_22160 SH05_RS22145 4463141 4464595 - xylulose kinase catalyzes the formation of D-xylulose-5-phosphate fro D-xylulose gene gene4417 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22145 SH05_RS22150 SH05_22165 SH05_RS22150 4464667 4465989 - xylose isomerase catalyzes the interconversion of D-xylose to D-xylulose gene gene4418 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22150 SH05_RS22155 SH05_RS22155 xylF xylF 4466277 4466654 + D-xylose transporter subunit XylF periplasmic substrate-binding component of the ATP-dependent xylose transport system%3B high affinity gene gene4419 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22155 SH05_RS22160 SH05_22175 SH05_RS22160 4466668 4467171 - transposase gene gene4420 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22160 SH05_RS22165 SH05_RS22165 xylF xylF 4467420 4468124 + D-xylose transporter subunit XylF periplasmic substrate-binding component of the ATP-dependent xylose transport system%3B high affinity gene gene4421 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22165 SH05_RS22170 SH05_22185 SH05_RS22170 4468202 4469743 + xylose import ATP-binding protein XylG with XylFH is part of the high affinity xylose ABC transporter gene gene4422 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22170 SH05_RS22175 SH05_22190 SH05_RS22175 4469721 4470902 + xylose ABC transporter permease gene gene4423 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22175 SH05_RS22180 SH05_22195 SH05_RS22180 4470980 4472158 + xylose operon regulatory protein gene gene4424 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22180 SH05_RS22185 SH05_22200 SH05_RS22185 4472354 4473178 - protein bax gene gene4425 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22185 SH05_RS22190 SH05_22205 malS malS 4473498 4475528 + alpha-amylase periplasmic enzyme that degrades maltodextrins that enter via the outer membrane porin LamB%3B hydrolyzes alpha-(1%2C4) glycosidic linkages%3B contains internal disulfide bonds gene gene4426 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22190 SH05_RS22195 SH05_22210 avtA avtA 4475706 4476959 + valine--pyruvate aminotransferase transaminase C%3B catalyzes transamination of alanine%2C valine%2C and 2-aminobutyrate with their respective 2-keto acids%3B also catalyzes terminal step in valine biosynthesis gene gene4427 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22195 SH05_RS22200 SH05_22215 SH05_RS22200 4476963 4477091 + hypothetical protein gene gene4428 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22200 SH05_RS22205 SH05_22220 SH05_RS22205 4477110 4477583 - hydrogenase 4Fe-4S ferredoxin-type component gene gene4429 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22205 SH05_RS22210 SH05_22225 SH05_RS22210 4477685 4478533 - transcriptional regulator gene gene4430 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22210 SH05_RS22215 SH05_22230 SH05_RS22215 4478734 4479732 + 2%2C3-diketo-L-gulonate reductase NAD(P)H-dependent%3B catalyzes the reduction of 2%2C3-diketo-L-gulonate to 3-keto-L-gulonate gene gene4431 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22215 SH05_RS22220 SH05_22235 SH05_RS22220 4479744 4480211 + hypothetical protein gene gene4432 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22220 SH05_RS22225 SH05_22240 SH05_RS22225 4480329 4480802 + 2%2C3-diketo-L-gulonate TRAP transporter permease membrane-spanning protein involved in uptake of 2%2C3-diketo-L-gulonate%3B part of the tri-partite ATP-independent periplasmic transport system (TRAP) YiaMNO gene gene4433 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22225 SH05_RS22230 SH05_22245 SH05_RS22230 4480805 4482082 + 2%2C3-diketo-L-gulonate TRAP transporter permease TRAP family transporter%3B with YiaMO is involved in the uptake of L-dehydroascorbate gene gene4434 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22230 SH05_RS22235 SH05_22250 SH05_RS22235 4482095 4483081 + 2%2C3-diketo-L-gulonate ABC transporter substrate-binding protein involved in the transport of 2%2C3-diketo-L-gulonate gene gene4435 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22235 SH05_RS22240 SH05_22255 SH05_RS22240 4483085 4484581 + L-xylulose/3-keto-L-gulonate kinase catalyzes the formation of L-xylulose 5-phosphate and 3-dehydro-L-gulonate 6-phosphate from L-xylulose or 3-dehydro-L-gulonate%2C respectively gene gene4436 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22240 SH05_RS22245 SH05_22260 sgbH sgbH 4484578 4485240 + 3-keto-L-gulonate-6-phosphate decarboxylase sgbH catalyzes the formation of L-xylulose-5-phosphate from 3-keto-L-gulonate-6-phosphate gene gene4437 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22245 SH05_RS22250 SH05_22265 SH05_RS22250 4485233 4486093 + L-xylulose 5-phosphate 3-epimerase L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated%3B may be involved in the utilization of 2%2C3-diketo-L-gulonate gene gene4438 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22250 SH05_RS22255 SH05_22270 araD araD 4486087 4486782 + L-ribulose-5-phosphate 4-epimerase SgbE catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate%3B links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source gene gene4439 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22255 SH05_RS22260 SH05_22275 SH05_RS22260 4487129 4487869 - outer membrane protein gene gene4440 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22260 SH05_RS22265 SH05_22280 SH05_RS22265 4487993 4488967 + transcriptional regulator gene gene4441 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22265 SH05_RS22270 SH05_22285 SH05_RS22270 4488964 4490100 - hypothetical protein gene gene4442 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22270 SH05_RS22275 SH05_22290 SH05_RS22275 4490106 4490429 - hypothetical protein gene gene4443 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22275 SH05_RS22280 SH05_RS22280 SH05_RS22280 4490543 4490755 + membrane protein gene gene4444 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22280 SH05_RS22285 SH05_22300 SH05_RS22285 4490974 4492512 - aldehyde dehydrogenase B catalyzes the oxidation of acetaldehyde%2C benzaldehyde%2C propionaldehyde and other aldehydes gene gene4445 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22285 SH05_RS22290 SH05_22305 SH05_RS22290 4492677 4493828 - alcohol dehydrogenase gene gene4446 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22290 SH05_RS22295 SH05_22310 SH05_RS22295 4494018 4495862 - selenocysteine-specific translation elongation factor gene gene4447 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22295 SH05_RS22300 SH05_22315 SH05_RS22300 4495859 4497250 - L-seryl-tRNA(Sec) selenium transferase catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis gene gene4448 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22300 SH05_RS22305 SH05_22320 SH05_RS22305 4497348 4497956 - glutathione S-transferase gene gene4449 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22305 SH05_RS22310 SH05_22325 SH05_RS22310 4498184 4502317 + RHS element protein RhsA gene gene4450 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22310 SH05_RS22315 SH05_22330 SH05_RS22315 4502338 4503180 + hypothetical protein gene gene4451 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22315 SH05_RS22320 SH05_22335 SH05_RS22320 4503228 4503923 + hypothetical protein gene gene4452 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22320 SH05_RS22325 SH05_22340 SH05_RS22325 4504178 4504639 + hypothetical protein gene gene4453 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22325 SH05_RS22330 SH05_RS22330 SH05_RS22330 4505346 4505784 + hypothetical protein gene gene4454 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22330 SH05_RS22335 SH05_22350 SH05_RS22335 4506244 4507380 - hypothetical protein gene gene4455 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22335 SH05_RS22340 SH05_22355 SH05_RS22340 4507383 4507745 - DUF3302 domain-containing protein gene gene4456 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22340 SH05_RS22345 SH05_RS22345 SH05_RS22345 4508282 4510193 + PTS mannitol transporter subunit IICBA catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIC forms the translocation channel and contains the specific substrate-binding site%3B subunit IIA is phosphorylated and transfers the phosphoryl group to the IIB subunit%3B subunit IIB transfers the phosphoryl group to the substrate gene gene4457 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22345 SH05_RS22350 SH05_22365 SH05_RS22350 4510423 4511571 + mannitol-1-phosphate 5-dehydrogenase gene gene4458 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22350 SH05_RS22355 SH05_22370 SH05_RS22355 4511568 4512158 + hypothetical protein gene gene4459 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22355 SH05_RS22360 SH05_22375 SH05_RS22360 4512170 4512379 - hypothetical protein gene gene4460 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22360 SH05_RS22365 SH05_22380 SH05_RS22365 4512664 4513026 + DUF2810 domain-containing protein gene gene4461 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22365 SH05_RS22370 SH05_22385 SH05_RS22370 4513398 4515053 + L-lactate permease gene gene4462 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22370 SH05_RS22375 SH05_22390 SH05_RS22375 4515053 4515829 + dual role activator/repressor for lldPRD operon represses the lctPRD operon gene gene4463 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22375 SH05_RS22380 SH05_22395 lldD lldD 4515826 4517016 + lactate dehydrogenase flavin mononucleotide-dependent dehydrogenase%3B functions in aerobic respiration and also has a role in anaerobic nitrate respiration gene gene4464 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22380 SH05_RS22385 SH05_22400 SH05_RS22385 4517214 4517687 + tRNA (cytidine(34)-2'-O)-methyltransferase member of the SPOUT superfamily of RNA methyltransferases gene gene4465 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22385 SH05_RS22390 SH05_22405 cysE cysE 4517740 4518561 - serine acetyltransferase catalyzes the O-acetylation of serine gene gene4466 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22390 SH05_RS22395 SH05_22410 SH05_RS22395 4518641 4519660 - glycerol-3-phosphate dehydrogenase [NAD(P)+] gene gene4467 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22395 SH05_RS22400 SH05_22415 SH05_RS22400 4519660 4520127 - preprotein translocase subunit SecB molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm%3B in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA gene gene4468 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22400 SH05_RS22405 SH05_22420 SH05_RS22405 4520190 4520441 - glutaredoxin gene gene4469 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22405 SH05_RS22410 SH05_22425 SH05_RS22410 4520583 4521014 - hypothetical protein gene gene4470 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22410 SH05_RS22415 SH05_22430 SH05_RS22415 4521042 4521152 - hypothetical protein gene gene4471 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22415 SH05_RS22420 SH05_22435 SH05_RS22420 4521259 4522803 + 2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate gene gene4472 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22420 SH05_RS22425 SH05_22440 SH05_RS22425 4522813 4524096 + peptidase M37 gene gene4473 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22425 SH05_RS22430 SH05_22445 SH05_RS22430 4524100 4525059 + polysaccharide deacetylase gene gene4474 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22430 SH05_RS22435 SH05_22450 SH05_RS22435 4525046 4526080 - LPS(HepIII)-glucuronic acid glycosyltransferase gene gene4475 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22435 SH05_RS22440 SH05_22455 tdh tdh 4526319 4527344 - l-threonine 3-dehydrogenase converts threonine and NAD to 1%2C2-amino-3-oxobutanoate and NADH%3B functions in threonine catabolism gene gene4476 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22440 SH05_RS22445 SH05_22460 SH05_RS22445 4527354 4528550 - 2-amino-3-ketobutyrate CoA ligase catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine gene gene4477 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22445 SH05_RS22450 SH05_22465 SH05_RS22450 4528825 4529682 - protein HtrL gene gene4478 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22450 SH05_RS22455 SH05_22470 rfaD rfaD 4529986 4530918 + ADP-L-glycero-D-manno-heptose-6-epimerase catalyzes the interconversion between ADP-D-glycero-beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose gene gene4479 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22455 SH05_RS22460 SH05_22475 SH05_RS22460 4530928 4531974 + ADP-heptose--LPS heptosyltransferase 2 catalyzes the transfer of the second heptose to the heptosyl-KDO2 moiety of the lipopolysaccharide inner core gene gene4480 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22460 SH05_RS22465 SH05_22480 SH05_RS22465 4531978 4532937 + LPS heptosyltransferase 1 gene gene4481 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22465 SH05_RS22470 SH05_22485 SH05_RS22470 4532947 4534206 + O-antigen ligase gene gene4482 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22470 SH05_RS22475 SH05_22490 SH05_RS22475 4534238 4535311 - LPS 1%2C2-N-acetylglucosaminetransferase gene gene4483 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22475 SH05_RS22480 SH05_22495 SH05_RS22480 4535344 4536195 - 3-deoxy-D-manno-oct-2-ulosonate III transferase WaaZ gene gene4484 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22480 SH05_RS22485 SH05_22500 SH05_RS22485 4536266 4536964 - LPS core heptose(II) kinase RfaY catalyzes the phosphorylation of heptose(II) of the outer membrane lipopolysaccharide core gene gene4485 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22485 SH05_RS22490 SH05_22505 SH05_RS22490 4536982 4537998 - LPS 1%2C2-glucosyltransferase gene gene4486 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22490 SH05_RS22495 SH05_22510 SH05_RS22495 4538038 4539057 - LPS 1%2C3-galactosyltransferase gene gene4487 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22495 SH05_RS22500 SH05_22515 SH05_RS22500 4539057 4540136 - LPS 1%2C6-galactosyltransferase gene gene4488 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22500 SH05_RS22505 SH05_22520 SH05_RS22505 4540180 4541115 - LPS biosynthesis protein gene gene4489 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22505 SH05_RS22510 SH05_22525 SH05_RS22510 4541152 4541949 - LPS core heptose(I) kinase RfaP catalyzes the phosphorylation of heptose I in the lipopolysaccharide core gene gene4490 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22510 SH05_RS22515 SH05_22530 SH05_RS22515 4541942 4543066 - LPS biosynthesis protein catalyzes the addition of the first glucose residue to the LPS core gene gene4491 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22515 SH05_RS22520 SH05_22535 SH05_RS22520 4543063 4544097 - LPS core heptosyltransferase RfaQ catalyzes the transfer of heptose(III) to heptose(II) in the lipopolysaccharide inner core gene gene4492 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22520 SH05_RS22525 SH05_22540 SH05_RS22525 4544539 4545816 + 3-deoxy-D-manno-octulosonic acid transferase catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A gene gene4493 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22525 SH05_RS22530 SH05_22545 coaD coaD 4545824 4546303 + phosphopantetheine adenylyltransferase Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA gene gene4494 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22530 SH05_RS22535 SH05_22550 SH05_RS22535 4546342 4547151 - formamidopyrimidine-DNA glycosylase Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases gene gene4495 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22535 SH05_RS22540 SH05_22555 rpmG rpmG 4547249 4547416 - 50S ribosomal protein L33 in Escherichia coli BM108%2C a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function%3B there are paralogous genes in several bacterial genomes%2C and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31%3B the proteins in this group lack the CXXC motif gene gene4496 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22540 SH05_RS22545 SH05_22560 rpmB rpmB 4547437 4547673 - 50S ribosomal protein L28 required for 70S ribosome assembly gene gene4497 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22545 SH05_RS22550 SH05_22565 SH05_RS22550 4547890 4548558 - hypothetical protein gene gene4498 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22550 SH05_RS22555 SH05_22570 SH05_RS22555 4548730 4549950 + CoA biosynthesis bifunctional protein CoaBC catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine%2C which is then decarboxylated to form 4'-phosphopantotheine gene gene4499 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22555 SH05_RS22560 SH05_22575 SH05_RS22560 4549928 4550386 + deoxyuridine 5'-triphosphate nucleotidohydrolase catalyzes the formation of dUMP from dUTP gene gene4500 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22560 SH05_RS22565 SH05_22580 slmA slmA 4550493 4551089 + nucleoid occlusion factor SlmA FtsZ binding protein%3B synthetically lethal with a defect in the Min system%3B this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly gene gene4501 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22565 SH05_RS22570 SH05_22585 pyrE pyrE 4551126 4551767 - orotate phosphoribosyltransferase involved in fifth step of pyrimidine biosynthesis%3B converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate gene gene4502 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22570 SH05_RS22575 SH05_22590 rph rph 4551833 4552549 - ribonuclease PH RNase PH%3B tRNA nucleotidyltransferase%3B forms hexamers in Bacillus subtilis%3B phosphoroltic 3'-5' exoribonuclease%3B involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs gene gene4503 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22575 SH05_RS22580 SH05_22595 SH05_RS22580 4552676 4553539 + hypothetical protein gene gene4504 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22580 SH05_RS22585 SH05_22600 dinD dinD 4553760 4554584 + DNA-damage-inducible protein D gene gene4505 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22585 SH05_RS22590 SH05_22605 SH05_RS22590 4554874 4555491 + hypothetical protein gene gene4506 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22590 SH05_RS22595 SH05_22610 ligB ligB 4555488 4557170 - DNA ligase B this ligase is similar to LigA but it lacks the C-terminal BRCT domain%3B catalyzes strand joining of nicked DNA in the presence of a divalent cation and NAD+ gene gene4507 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22595 SH05_RS22600 SH05_22615 gmk gmk 4557428 4558051 + guanylate kinase Essential for recycling GMP and indirectly%2C cGMP gene gene4508 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22600 SH05_RS22605 SH05_22620 rpoZ rpoZ 4558106 4558381 + DNA-directed RNA polymerase subunit omega Promotes RNA polymerase assembly%3B latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits gene gene4509 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22605 SH05_RS22610 SH05_22625 SH05_RS22610 4558400 4560508 + bifunctional (p)ppGpp synthetase II/ guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase gene gene4510 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22610 SH05_RS22615 SH05_22630 SH05_RS22615 4560515 4561204 + tRNA (guanosine(18)-2'-O)-methyltransferase specifically modifies tRNA at position G18 gene gene4511 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22615 SH05_RS22620 SH05_22635 SH05_RS22620 4561210 4563291 + ATP-dependent DNA helicase RecG catalyzes branch migration in Holliday junction intermediates gene gene4512 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22620 SH05_RS22625 SH05_22640 SH05_RS22625 4563460 4564665 - sodium/glutamate symport carrier protein is involved with the sodium-dependent uptake of glutamate gene gene4513 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22625 SH05_RS22630 SH05_22645 SH05_RS22630 4564945 4566336 + xanthine permease XanP high-affinity transporter for xanthine gene gene4514 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22630 SH05_RS22635 SH05_22650 SH05_RS22635 4566457 4568166 + AsmA family protein gene gene4515 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22635 SH05_RS22640 SH05_22655 SH05_RS22640 4568219 4570537 - alpha-xylosidase catalyzes the transfer of alpha-xylosyl residue gene gene4516 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22640 SH05_RS22645 SH05_22660 SH05_RS22645 4570547 4571929 - inner membrane symporter YicJ may be involved in the transport of galactosides-pentoses-hexuronides gene gene4517 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22645 SH05_RS22650 SH05_22665 SH05_RS22650 4572222 4572316 + tRNA-Sec tRNA gene4518 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22650 SH05_RS22655 SH05_22670 SH05_RS22655 4572425 4572571 + hypothetical protein gene gene4519 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22655 SH05_RS22660 SH05_22675 SH05_RS22660 4572953 4574137 + sugar efflux transporter C gene gene4520 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22660 SH05_RS22665 SH05_22680 SH05_RS22665 4574248 4575171 + transporter gene gene4521 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22665 SH05_RS22670 SH05_22685 SH05_RS22670 4575175 4575993 - lipoprotein 28 gene gene4522 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22670 SH05_RS22675 SH05_22690 SH05_RS22675 4576091 4576210 + hypothetical protein gene gene4523 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22675 SH05_RS22680 SH05_22695 SH05_RS22680 4576215 4576508 + hypothetical protein gene gene4524 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22680 SH05_RS22685 SH05_22700 nepI nepI 4576549 4577739 - purine ribonucleoside efflux pump NepI experimental results in Escherichia coli suggest that this gene encodes an inosine export protein%3B member of major facilitator superfamily%3B MFS gene gene4525 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22685 SH05_RS22690 SH05_22705 SH05_RS22690 4577950 4578402 - DUF1198 domain-containing protein gene gene4526 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22690 SH05_RS22695 SH05_22710 SH05_RS22695 4578455 4579867 - adenine permease involved in the transport or adenine gene gene4527 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22695 SH05_RS22700 SH05_22715 SH05_RS22700 4579964 4581730 + adenine deaminase catalyzes the formation of hypoxanthine from adenine%3B in E. coli this activity has been detected in mutant strains but not in wild type gene gene4528 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22700 SH05_RS22705 SH05_22720 uhpT uhpT 4581776 4583167 - hexose phosphate transporter cytoplasmic membrane protein that functions as a monomer%3B catalyzes the active transport of sugar-phosphates such as glucose-6-phosphate with the obligatory exchange of inorganic phosphate or organophosphate gene gene4529 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22705 SH05_RS22710 SH05_22725 SH05_RS22710 4583305 4584624 - regulatory protein UhpC membrane protein regulates uhpT expression gene gene4530 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22710 SH05_RS22715 SH05_22730 SH05_RS22715 4584634 4586136 - sensor protein UhpB Member of the two-component regulatory system UhpB/UhpA involved in the regulation of the uptake of hexose ph gene gene4531 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22715 SH05_RS22720 SH05_22735 SH05_RS22720 4586136 4586726 - transcriptional regulator response regulator in two-component regulatory system wtih UhpB%3B phosphorylated UhpA is a positive activator uhpT%2C a hexose phosphates transporter gene gene4532 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22720 SH05_RS22725 SH05_22740 SH05_RS22725 4586802 4587092 - acetolactate synthase isozyme 1 small subunit with IlvB catalyzes the formation of 2-acetolactate from pyruvate%2C the small subunit is required for full activity and valine sensitivity%3B E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates%2C valine sensitivity and affinity for cofactors%3B also known as acetolactate synthase small subunit gene gene4533 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22725 SH05_RS22730 SH05_22745 SH05_RS22730 4587096 4588784 - acetolactate synthase isozyme 1 large subunit gene gene4534 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22730 SH05_RS22735 SH05_22750 SH05_RS22735 4588890 4588988 - IlvBN operon leader peptide gene gene4535 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22735 SH05_RS22740 SH05_22755 SH05_RS22740 4588975 4589265 + hypothetical protein gene gene4536 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22740 SH05_RS22745 SH05_22760 SH05_RS22745 4589262 4589420 + hypothetical protein gene gene4537 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22745 SH05_RS22750 SH05_22765 SH05_RS22750 4589553 4589642 + small toxic protein TisB gene gene4538 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22750 SH05_RS22755 SH05_22770 emrD emrD 4589922 4591106 + multidrug resistance protein D multidrug efflux protein involved in adaptation to low energy shock gene gene4539 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22755 SH05_RS22760 SH05_22775 SH05_RS22760 4591114 4591611 - hypothetical protein gene gene4540 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22760 SH05_RS22765 SH05_22780 SH05_RS22765 4591608 4591970 - hypothetical protein gene gene4541 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22765 SH05_RS22770 SH05_22785 SH05_RS22770 4591960 4592307 - hypothetical protein gene gene4542 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22770 SH05_RS22775 SH05_22790 SH05_RS22775 4592415 4592864 + hypothetical protein gene gene4543 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22775 SH05_RS22780 SH05_22795 SH05_RS22780 4592911 4594404 - sulfatase/phosphatase superfamily protein gene gene4544 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22780 SH05_RS22785 SH05_22800 SH05_RS22785 4594401 4596116 - transporter uncharacterized member of the SSS superfamily of sodium-dependent solute transporters%3B unknown function gene gene4545 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22785 SH05_RS22790 SH05_22805 SH05_RS22790 4596283 4597176 + AraC family transcriptional regulator gene gene4546 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22790 SH05_RS22795 SH05_22810 SH05_RS22795 4597349 4597987 - inactive 6-phospho-alpha-glucosidase gene gene4547 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22795 SH05_RS22800 SH05_22815 SH05_RS22800 4597987 4598472 - phosphotransferase enzyme IIB component GlvB gene gene4548 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22800 SH05_RS22805 SH05_22820 SH05_RS22805 4598497 4599603 - permease gene gene4549 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22805 SH05_RS22810 SH05_22825 SH05_RS22810 4599899 4600615 + transcriptional regulator gene gene4550 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22810 SH05_RS22815 SH05_22830 SH05_RS22815 4600612 4602273 - transporter gene gene4551 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22815 SH05_RS22820 SH05_22835 SH05_RS22820 4602469 4602897 - heat-shock protein IbpB 16 kDa heat shock protein B%3B associates with aggregated proteins%2C together with ibpA%2C to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress%3B ATP-independent gene gene4552 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22820 SH05_RS22825 SH05_22840 SH05_RS22825 4603009 4603422 - heat-shock protein IbpA with IbpB associates with aggregated proteins to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress gene gene4553 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22825 SH05_RS22830 SH05_22845 SH05_RS22830 4603800 4604060 + hypothetical protein gene gene4554 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22830 SH05_RS22835 SH05_22850 SH05_RS22835 4604062 4605276 - hypothetical protein gene gene4555 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22835 SH05_RS22840 SH05_22855 SH05_RS22840 4605377 4606441 + protein CbrA FAD/NAD(P)-binding domain gene gene4556 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22840 SH05_RS22845 SH05_22860 SH05_RS22845 4606438 4607730 - D-galactonate transporter gene gene4557 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22845 SH05_RS22850 SH05_22865 SH05_RS22850 4607850 4608998 - D-galactonate dehydratase 2 gene gene4558 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22850 SH05_RS22855 SH05_22870 SH05_RS22855 4608995 4609612 - 2-dehydro-3-deoxy-6-phosphogalactonate aldolase catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate%3B functions in galactonate metabolism gene gene4559 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22855 SH05_RS22860 SH05_22875 SH05_RS22860 4609596 4610474 - 2-dehydro-3-deoxygalactonokinase catalyzes the formation of 2-dehydro-3-deoxy-D-galactonate 6-phosphate from 2-dehydro-3-deoxy-D-galactonate gene gene4560 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22860 SH05_RS22865 SH05_22880 SH05_RS22865 4610471 4611160 - transcriptional regulator gene gene4561 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22865 SH05_RS22870 SH05_22885 SH05_RS22870 4611438 4612094 + hypothetical protein gene gene4562 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22870 SH05_RS22875 SH05_22890 SH05_RS22875 4612140 4612952 - sugar phosphatase YidA YidA%3B catalyzes the dephosphorylation of erythrose 4-phosphate (preferred substrate)%2C mannose 1-phosphate and p-nitrophenyl phosphate%3B hydrolyzes the alpha-D-glucose-1-phosphate but not the beta form%3B member of the haloacid dehalogenase-like hydrolases superfamily and Cof family of proteins gene gene4563 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22875 SH05_RS22880 SH05_22895 SH05_RS22880 4613067 4613465 - DUF937 domain-containing protein gene gene4564 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22880 SH05_RS22885 SH05_22900 SH05_RS22885 4613485 4613685 - hypothetical protein gene gene4565 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22885 SH05_RS22890 SH05_22905 gyrB gyrB 4613705 4616119 - DNA gyrase subunit B negatively supercoils closed circular double-stranded DNA gene gene4566 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22890 SH05_RS22895 SH05_22910 recF recF 4616148 4617221 - DNA recombination protein RecF Required for DNA replication%3B binds preferentially to single-stranded%2C linear DNA gene gene4567 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22895 SH05_RS22900 SH05_22915 SH05_RS22900 4617221 4618321 - DNA polymerase III subunit beta binds the polymerase to DNA and acts as a sliding clamp gene gene4568 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22900 SH05_RS22905 SH05_22920 dnaA dnaA 4618326 4619729 - chromosomal replication initiator protein DnaA binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication%3B can also affect transcription of multiple genes including itself. gene gene4569 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22905 SH05_RS22960 SH05_RS22960 SH05_RS22960 616524 617638 - phosphoethanolamine transferase YjgX gene gene593 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22960 SH05_RS22965 SH05_RS22965 SH05_RS22965 635568 635861 + transposase gene gene615 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22965 SH05_RS22970 SH05_RS22970 SH05_RS22970 1976467 1979114 + autotransporter gene gene1954 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22970 SH05_RS22975 SH05_RS22975 SH05_RS22975 2174823 2174978 - hypothetical protein gene gene2158 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22975 SH05_RS22980 SH05_RS22980 SH05_RS22980 3228504 3229260 - replication protein gene gene3194 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22980 SH05_RS22985 SH05_19865 SH05_RS22985 4011627 4011821 - propionate kinase gene gene3958 http://www.ncbi.nlm.nih.gov/gene/?term=SH05_RS22985