locus-tag class description SH02_RS00005 PF00468 Ribosomal protein L34 SH02_RS00010 PF00825 Ribonuclease P SH02_RS00015 PF01809 Putative membrane protein insertion efficiency factor SH02_RS00020 PF14849 YidC periplasmic domain SH02_RS00020 PF02096 60Kd inner membrane protein SH02_RS00025 PF10396 GTP-binding protein TrmE N-terminus SH02_RS00025 PF12631 MnmE helical domain SH02_RS00025 PF01926 50S ribosome-binding GTPase SH02_RS00030 PF08053 Tryptophanase operon leader peptide SH02_RS00035 PF01212 Beta-eliminating lyase SH02_RS00040 PF03222 Tryptophan/tyrosine permease family SH02_RS00045 PF07690 Major Facilitator Superfamily SH02_RS00050 PF03466 LysR substrate binding domain SH02_RS00050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS00060 PF03358 NADPH-dependent FMN reductase SH02_RS00065 PF00860 Permease family SH02_RS00070 PF13419 Haloacid dehalogenase-like hydrolase SH02_RS00080 PF03691 Uncharacterised protein family (UPF0167) SH02_RS00085 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SH02_RS00090 PF00756 Putative esterase SH02_RS00090 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SH02_RS00095 PF02264 LamB porin SH02_RS00095 PF11471 Maltoporin periplasmic N-terminal extension SH02_RS00100 PF00232 Glycosyl hydrolase family 1 SH02_RS00105 PF00367 phosphotransferase system, EIIB SH02_RS00105 PF02378 Phosphotransferase system, EIIC SH02_RS00105 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SH02_RS00110 PF03123 CAT RNA binding domain SH02_RS00110 PF00874 PRD domain SH02_RS00115 PF01895 PhoU domain SH02_RS00120 PF00005 ABC transporter SH02_RS00125 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS00130 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS00135 PF12849 PBP superfamily domain SH02_RS00140 PF01380 SIS domain SH02_RS00145 PF00132 Bacterial transferase hexapeptide (six repeats) SH02_RS00145 PF14602 Hexapeptide repeat of succinyl-transferase SH02_RS00145 PF12804 MobA-like NTP transferase domain SH02_RS00150 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SH02_RS00150 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SH02_RS00155 PF02874 ATP synthase alpha/beta family, beta-barrel domain SH02_RS00155 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SH02_RS00160 PF00231 ATP synthase SH02_RS00165 PF02874 ATP synthase alpha/beta family, beta-barrel domain SH02_RS00165 PF00306 ATP synthase alpha/beta chain, C terminal domain SH02_RS00165 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SH02_RS00170 PF00213 ATP synthase delta (OSCP) subunit SH02_RS00175 PF00430 ATP synthase B/B' CF(0) SH02_RS00180 PF00137 ATP synthase subunit C SH02_RS00185 PF00119 ATP synthase A chain SH02_RS00190 PF03899 ATP synthase I chain SH02_RS00195 PF02527 rRNA small subunit methyltransferase G SH02_RS00200 PF13932 GidA associated domain SH02_RS00200 PF01134 Glucose inhibited division protein A SH02_RS00205 PF00258 Flavodoxin SH02_RS00210 PF01037 Lrp/AsnC ligand binding domain SH02_RS00215 PF03590 Aspartate-ammonia ligase SH02_RS00220 PF05762 VWA domain containing CoxE-like protein SH02_RS00225 PF07728 AAA domain (dynein-related subfamily) SH02_RS00225 PF17868 AAA lid domain SH02_RS00225 PF12592 Protein of unknown function (DUF3763) SH02_RS00230 PF02705 K+ potassium transporter SH02_RS00235 PF05025 RbsD / FucU transport protein family SH02_RS00240 PF00005 ABC transporter SH02_RS00245 PF02653 Branched-chain amino acid transport system / permease component SH02_RS00250 PF13407 Periplasmic binding protein domain SH02_RS00255 PF00294 pfkB family carbohydrate kinase SH02_RS00260 PF00356 Bacterial regulatory proteins, lacI family SH02_RS00265 PF07690 Major Facilitator Superfamily SH02_RS00270 PF07729 FCD domain SH02_RS00270 PF00392 Bacterial regulatory proteins, gntR family SH02_RS00305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS00305 PF03466 LysR substrate binding domain SH02_RS00310 PF04219 Protein of unknown function, DUF SH02_RS00315 PF13335 Magnesium chelatase, subunit ChlI C-terminal SH02_RS00315 PF01078 Magnesium chelatase, subunit ChlI SH02_RS00320 PF08046 IlvGEDA operon leader peptide SH02_RS00335 PF01063 Amino-transferase class IV SH02_RS00340 PF00920 Dehydratase family SH02_RS00345 PF00291 Pyridoxal-phosphate dependent enzyme SH02_RS00345 PF00585 C-terminal regulatory domain of Threonine dehydratase SH02_RS00350 PF03466 LysR substrate binding domain SH02_RS00350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS00355 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain SH02_RS00355 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain SH02_RS00370 PF13361 UvrD-like helicase C-terminal domain SH02_RS00370 PF00580 UvrD/REP helicase N-terminal domain SH02_RS00375 PF02541 Ppx/GppA phosphatase family SH02_RS00380 PF00271 Helicase conserved C-terminal domain SH02_RS00380 PF00270 DEAD/DEAH box helicase SH02_RS00385 PF00085 Thioredoxin SH02_RS00395 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SH02_RS00395 PF07498 Rho termination factor, N-terminal domain SH02_RS00395 PF07497 Rho termination factor, RNA-binding domain SH02_RS00405 PF00953 Glycosyl transferase family 4 SH02_RS00410 PF02706 Chain length determinant protein SH02_RS00415 PF02350 UDP-N-acetylglucosamine 2-epimerase SH02_RS00420 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SH02_RS00420 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SH02_RS00420 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SH02_RS00425 PF16363 GDP-mannose 4,6 dehydratase SH02_RS00430 PF00483 Nucleotidyl transferase SH02_RS00440 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SH02_RS00445 PF01943 Polysaccharide biosynthesis protein SH02_RS00450 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 SH02_RS00455 PF06899 WzyE protein, O-antigen assembly polymerase SH02_RS00460 PF03808 Glycosyl transferase WecB/TagA/CpsF family SH02_RS00465 PF00324 Amino acid permease SH02_RS00490 PF04055 Radical SAM superfamily SH02_RS00490 PF13186 Iron-sulfur cluster-binding domain SH02_RS00495 PF00884 Sulfatase SH02_RS00500 PF07219 HemY protein N-terminus SH02_RS00500 PF07719 Tetratricopeptide repeat SH02_RS00505 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase SH02_RS00510 PF02602 Uroporphyrinogen-III synthase HemD SH02_RS00515 PF03900 Porphobilinogen deaminase, C-terminal domain SH02_RS00515 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain SH02_RS00520 PF01295 Adenylate cyclase, class-I SH02_RS00520 PF12633 Adenylate cyclase NT domain SH02_RS00525 PF01491 Frataxin-like domain SH02_RS00530 PF13627 Prokaryotic lipoprotein-attachment site SH02_RS00535 PF01678 Diaminopimelate epimerase SH02_RS00540 PF04340 Protein of unknown function, DUF484 SH02_RS00545 PF00589 Phage integrase family SH02_RS00545 PF02899 Phage integrase, N-terminal SAM-like domain SH02_RS00550 PF13419 Haloacid dehalogenase-like hydrolase SH02_RS00555 PF00580 UvrD/REP helicase N-terminal domain SH02_RS00555 PF13361 UvrD-like helicase C-terminal domain SH02_RS00560 PF09992 Phosphodiester glycosidase SH02_RS00570 PF01544 CorA-like Mg2+ transporter protein SH02_RS00575 PF10947 Protein of unknown function (DUF2628) SH02_RS00585 PF00892 EamA-like transporter family SH02_RS00590 PF03061 Thioesterase superfamily SH02_RS00595 PF02253 Phospholipase A1 SH02_RS00600 PF16124 RecQ zinc-binding SH02_RS00600 PF00270 DEAD/DEAH box helicase SH02_RS00600 PF00570 HRDC domain SH02_RS00600 PF00271 Helicase conserved C-terminal domain SH02_RS00600 PF09382 RQC domain SH02_RS00605 PF01810 LysE type translocator SH02_RS00610 PF01810 LysE type translocator SH02_RS00615 PF12146 Serine aminopeptidase, S33 SH02_RS00625 PF00892 EamA-like transporter family SH02_RS00630 PF03466 LysR substrate binding domain SH02_RS00630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS00635 PF08267 Cobalamin-independent synthase, N-terminal domain SH02_RS00635 PF01717 Cobalamin-independent synthase, Catalytic domain SH02_RS00640 PF01738 Dienelactone hydrolase family SH02_RS00645 PF01048 Phosphorylase superfamily SH02_RS00650 PF02646 RmuC family SH02_RS00655 PF01209 ubiE/COQ5 methyltransferase family SH02_RS00660 PF02036 SCP-2 sterol transfer family SH02_RS00665 PF03109 ABC1 family SH02_RS00670 PF02416 mttA/Hcf106 family SH02_RS00680 PF00902 Sec-independent protein translocase protein (TatC) SH02_RS00685 PF01026 TatD related DNase SH02_RS00690 PF02357 Transcription termination factor nusG SH02_RS00695 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase SH02_RS00700 PF00970 Oxidoreductase FAD-binding domain SH02_RS00700 PF00175 Oxidoreductase NAD-binding domain SH02_RS00705 PF00108 Thiolase, N-terminal domain SH02_RS00705 PF02803 Thiolase, C-terminal domain SH02_RS00710 PF00378 Enoyl-CoA hydratase/isomerase SH02_RS00710 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SH02_RS00710 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SH02_RS00715 PF00557 Metallopeptidase family M24 SH02_RS00720 PF09186 Domain of unknown function (DUF1949) SH02_RS00720 PF01205 Uncharacterized protein family UPF0029 SH02_RS00725 PF02386 Cation transport protein SH02_RS00730 PF12724 Flavodoxin domain SH02_RS00760 PF03205 Molybdopterin guanine dinucleotide synthesis protein B SH02_RS00765 PF12804 MobA-like NTP transferase domain SH02_RS00770 PF06288 Protein of unknown function (DUF1040) SH02_RS00775 PF01636 Phosphotransferase enzyme family SH02_RS00780 PF01323 DSBA-like thioredoxin domain SH02_RS00785 PF06097 Bacterial protein of unknown function (DUF945) SH02_RS00790 PF01553 Acyltransferase SH02_RS00800 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SH02_RS00800 PF01367 5'-3' exonuclease, C-terminal SAM fold SH02_RS00800 PF01612 3'-5' exonuclease SH02_RS00800 PF00476 DNA polymerase family A SH02_RS00805 PF01926 50S ribosome-binding GTPase SH02_RS00810 PF04220 Der GTPase activator (YihI) SH02_RS00815 PF04055 Radical SAM superfamily SH02_RS00815 PF06969 HemN C-terminal domain SH02_RS00825 PF00158 Sigma-54 interaction domain SH02_RS00825 PF00072 Response regulator receiver domain SH02_RS00825 PF02954 Bacterial regulatory protein, Fis family SH02_RS00830 PF00989 PAS fold SH02_RS00830 PF00512 His Kinase A (phospho-acceptor) domain SH02_RS00830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SH02_RS00835 PF00120 Glutamine synthetase, catalytic domain SH02_RS00835 PF03951 Glutamine synthetase, beta-Grasp domain SH02_RS00845 PF00679 Elongation factor G C-terminus SH02_RS00845 PF00009 Elongation factor Tu GTP binding domain SH02_RS00845 PF03144 Elongation factor Tu domain 2 SH02_RS00850 PF07702 UTRA domain SH02_RS00850 PF00392 Bacterial regulatory proteins, gntR family SH02_RS00855 PF01261 Xylose isomerase-like TIM barrel SH02_RS00860 PF07690 Major Facilitator Superfamily SH02_RS00865 PF06178 Oligogalacturonate-specific porin protein (KdgM) SH02_RS00880 PF01055 Glycosyl hydrolases family 31 SH02_RS00885 PF01263 Aldose 1-epimerase SH02_RS00895 PF01791 DeoC/LacD family aldolase SH02_RS00900 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SH02_RS00900 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SH02_RS00905 PF00294 pfkB family carbohydrate kinase SH02_RS00910 PF00455 DeoR C terminal sensor domain SH02_RS00910 PF08220 DeoR-like helix-turn-helix domain SH02_RS00915 PF13419 Haloacid dehalogenase-like hydrolase SH02_RS00920 PF03631 Virulence factor BrkB SH02_RS00925 PF02580 D-Tyr-tRNA(Tyr) deacylase SH02_RS00930 PF09500 Putative thioesterase (yiiD_Cterm) SH02_RS00930 PF00583 Acetyltransferase (GNAT) family SH02_RS00935 PF01402 Ribbon-helix-helix protein, copG family SH02_RS00950 PF04216 Protein involved in formate dehydrogenase formation SH02_RS00955 PF01292 Prokaryotic cytochrome b561 SH02_RS00960 PF13247 4Fe-4S dicluster domain SH02_RS00960 PF09163 Formate dehydrogenase N, transmembrane SH02_RS00965 PF01568 Molydopterin dinucleotide binding domain SH02_RS00965 PF00384 Molybdopterin oxidoreductase SH02_RS00965 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SH02_RS00970 PF00384 Molybdopterin oxidoreductase SH02_RS00970 PF01568 Molydopterin dinucleotide binding domain SH02_RS00970 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SH02_RS00975 PF02634 FdhD/NarQ family SH02_RS00980 PF12889 Protein of unknown function (DUF3829) SH02_RS00985 PF08279 HTH domain SH02_RS00985 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SH02_RS00990 PF05343 M42 glutamyl aminopeptidase SH02_RS00995 PF02378 Phosphotransferase system, EIIC SH02_RS00995 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SH02_RS01000 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SH02_RS01005 PF05336 L-rhamnose mutarotase SH02_RS01010 PF00596 Class II Aldolase and Adducin N-terminal domain SH02_RS01015 PF06134 L-rhamnose isomerase (RhaA) SH02_RS01020 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SH02_RS01020 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SH02_RS01030 PF02311 AraC-like ligand binding domain SH02_RS01030 PF12833 Helix-turn-helix domain SH02_RS01035 PF12833 Helix-turn-helix domain SH02_RS01035 PF02311 AraC-like ligand binding domain SH02_RS01040 PF06379 L-rhamnose-proton symport protein (RhaT) SH02_RS01045 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SH02_RS01045 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SH02_RS01055 PF03812 2-keto-3-deoxygluconate permease SH02_RS01060 PF03475 3-alpha domain SH02_RS01060 PF03473 MOSC domain SH02_RS01065 PF16527 Two-component sensor protein CpxA, periplasmic domain SH02_RS01065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SH02_RS01065 PF00512 His Kinase A (phospho-acceptor) domain SH02_RS01065 PF00672 HAMP domain SH02_RS01070 PF00072 Response regulator receiver domain SH02_RS01070 PF00486 Transcriptional regulatory protein, C terminal SH02_RS01075 PF07813 LTXXQ motif family protein SH02_RS01080 PF01545 Cation efflux family SH02_RS01080 PF16916 Dimerisation domain of Zinc Transporter SH02_RS01085 PF00365 Phosphofructokinase SH02_RS01095 PF02611 CDP-diacylglycerol pyrophosphatase SH02_RS01100 PF00121 Triosephosphate isomerase SH02_RS01105 PF07305 Protein of unknown function (DUF1454) SH02_RS01110 PF05656 Protein of unknown function (DUF805) SH02_RS01115 PF04175 Protein of unknown function (DUF406) SH02_RS01120 PF00582 Universal stress protein family SH02_RS01125 PF00175 Oxidoreductase NAD-binding domain SH02_RS01125 PF00970 Oxidoreductase FAD-binding domain SH02_RS01130 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded SH02_RS01135 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SH02_RS01135 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SH02_RS01140 PF00230 Major intrinsic protein SH02_RS01145 PF06005 Cell division protein ZapB SH02_RS01150 PF03737 Aldolase/RraA SH02_RS01155 PF01040 UbiA prenyltransferase family SH02_RS01160 PF00004 ATPase family associated with various cellular activities (AAA) SH02_RS01160 PF10431 C-terminal, D2-small domain, of ClpB protein SH02_RS01160 PF07724 AAA domain (Cdc48 subfamily) SH02_RS01165 PF00227 Proteasome subunit SH02_RS01170 PF05036 Sporulation related domain SH02_RS01175 PF00356 Bacterial regulatory proteins, lacI family SH02_RS01180 PF00270 DEAD/DEAH box helicase SH02_RS01180 PF17764 3′ DNA-binding domain (3′BD) SH02_RS01180 PF18074 Primosomal protein N C-terminal domain SH02_RS01180 PF00271 Helicase conserved C-terminal domain SH02_RS01180 PF18319 PriA DNA helicase Cys-rich region (CRR) domain SH02_RS01185 PF01197 Ribosomal protein L31 SH02_RS01190 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family SH02_RS01195 PF01340 Met Apo-repressor, MetJ SH02_RS01205 PF00696 Amino acid kinase family SH02_RS01205 PF03447 Homoserine dehydrogenase, NAD binding domain SH02_RS01205 PF00742 Homoserine dehydrogenase SH02_RS01215 PF02219 Methylenetetrahydrofolate reductase SH02_RS01220 PF00141 Peroxidase SH02_RS01225 PF00892 EamA-like transporter family SH02_RS01230 PF06940 Domain of unknown function (DUF1287) SH02_RS01240 PF00465 Iron-containing alcohol dehydrogenase SH02_RS01245 PF00923 Transaldolase/Fructose-6-phosphate aldolase SH02_RS01250 PF02896 PEP-utilising enzyme, TIM barrel domain SH02_RS01250 PF00391 PEP-utilising enzyme, mobile domain SH02_RS01250 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SH02_RS01250 PF00381 PTS HPr component phosphorylation site SH02_RS01250 PF05524 PEP-utilising enzyme, N-terminal SH02_RS01260 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SH02_RS01265 PF02901 Pyruvate formate lyase-like SH02_RS01265 PF01228 Glycine radical SH02_RS01270 PF04055 Radical SAM superfamily SH02_RS01275 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SH02_RS01280 PF12833 Helix-turn-helix domain SH02_RS01285 PF00884 Sulfatase SH02_RS01290 PF00311 Phosphoenolpyruvate carboxylase SH02_RS01300 PF01546 Peptidase family M20/M25/M40 SH02_RS01300 PF07687 Peptidase dimerisation domain SH02_RS01305 PF02774 Semialdehyde dehydrogenase, dimerisation domain SH02_RS01305 PF01118 Semialdehyde dehydrogenase, NAD binding domain SH02_RS01310 PF00696 Amino acid kinase family SH02_RS01315 PF00206 Lyase SH02_RS01315 PF14698 Argininosuccinate lyase C-terminal SH02_RS01320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS01320 PF03466 LysR substrate binding domain SH02_RS01325 PF07992 Pyridine nucleotide-disulphide oxidoreductase SH02_RS01325 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SH02_RS01330 PF00440 Bacterial regulatory proteins, tetR family SH02_RS01335 PF07226 Protein of unknown function (DUF1422) SH02_RS01340 PF05958 tRNA (Uracil-5-)-methyltransferase SH02_RS01345 PF07715 TonB-dependent Receptor Plug Domain SH02_RS01345 PF00593 TonB dependent receptor SH02_RS01350 PF01177 Asp/Glu/Hydantoin racemase SH02_RS01375 PF01565 FAD binding domain SH02_RS01375 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SH02_RS01380 PF03099 Biotin/lipoate A/B protein ligase family SH02_RS01380 PF08279 HTH domain SH02_RS01380 PF02237 Biotin protein ligase C terminal domain SH02_RS01385 PF00485 Phosphoribulokinase / Uridine kinase family SH02_RS01415 PF03143 Elongation factor Tu C-terminal domain SH02_RS01415 PF03144 Elongation factor Tu domain 2 SH02_RS01415 PF00009 Elongation factor Tu GTP binding domain SH02_RS01420 PF00584 SecE/Sec61-gamma subunits of protein translocation complex SH02_RS01425 PF00467 KOW motif SH02_RS01425 PF02357 Transcription termination factor nusG SH02_RS01430 PF00298 Ribosomal protein L11, RNA binding domain SH02_RS01430 PF03946 Ribosomal protein L11, N-terminal domain SH02_RS01435 PF00687 Ribosomal protein L1p/L10e family SH02_RS01440 PF00466 Ribosomal protein L10 SH02_RS01445 PF16320 Ribosomal protein L7/L12 dimerisation domain SH02_RS01445 PF00542 Ribosomal protein L7/L12 C-terminal domain SH02_RS01450 PF04563 RNA polymerase beta subunit SH02_RS01450 PF04560 RNA polymerase Rpb2, domain 7 SH02_RS01450 PF00562 RNA polymerase Rpb2, domain 6 SH02_RS01450 PF10385 RNA polymerase beta subunit external 1 domain SH02_RS01450 PF04565 RNA polymerase Rpb2, domain 3 SH02_RS01450 PF04561 RNA polymerase Rpb2, domain 2 SH02_RS01455 PF04998 RNA polymerase Rpb1, domain 5 SH02_RS01455 PF05000 RNA polymerase Rpb1, domain 4 SH02_RS01455 PF04983 RNA polymerase Rpb1, domain 3 SH02_RS01455 PF00623 RNA polymerase Rpb1, domain 2 SH02_RS01455 PF04997 RNA polymerase Rpb1, domain 1 SH02_RS01465 PF04055 Radical SAM superfamily SH02_RS01465 PF06968 Biotin and Thiamin Synthesis associated domain SH02_RS01470 PF05690 Thiazole biosynthesis protein ThiG SH02_RS01475 PF02597 ThiS family SH02_RS01480 PF00899 ThiF family SH02_RS01485 PF02581 Thiamine monophosphate synthase SH02_RS01490 PF01964 Radical SAM ThiC family SH02_RS01490 PF13667 ThiC-associated domain SH02_RS01495 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ SH02_RS01500 PF00293 NUDIX domain SH02_RS01500 PF09297 NADH pyrophosphatase zinc ribbon domain SH02_RS01505 PF01208 Uroporphyrinogen decarboxylase (URO-D) SH02_RS01510 PF04493 Endonuclease V SH02_RS01515 PF04222 Protein of unknown function (DUF416) SH02_RS01520 PF00216 Bacterial DNA-binding protein SH02_RS01525 PF07356 Protein of unknown function (DUF1481) SH02_RS01530 PF13801 Heavy-metal resistance SH02_RS01535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SH02_RS01535 PF00512 His Kinase A (phospho-acceptor) domain SH02_RS01540 PF02954 Bacterial regulatory protein, Fis family SH02_RS01540 PF00072 Response regulator receiver domain SH02_RS01540 PF00158 Sigma-54 interaction domain SH02_RS01545 PF02844 Phosphoribosylglycinamide synthetase, N domain SH02_RS01545 PF02843 Phosphoribosylglycinamide synthetase, C domain SH02_RS01545 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SH02_RS01550 PF02142 MGS-like domain SH02_RS01550 PF01808 AICARFT/IMPCHase bienzyme SH02_RS01590 PF13673 Acetyltransferase (GNAT) domain SH02_RS01595 PF04204 Homoserine O-succinyltransferase SH02_RS01600 PF01274 Malate synthase SH02_RS01605 PF00463 Isocitrate lyase family SH02_RS01610 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) SH02_RS01615 PF07906 ShET2 enterotoxin, N-terminal region SH02_RS01620 PF09339 IclR helix-turn-helix domain SH02_RS01620 PF01614 Bacterial transcriptional regulator SH02_RS01625 PF02607 B12 binding domain SH02_RS01625 PF02574 Homocysteine S-methyltransferase SH02_RS01625 PF00809 Pterin binding enzyme SH02_RS01625 PF02965 Vitamin B12 dependent methionine synthase, activation domain SH02_RS01625 PF02310 B12 binding domain SH02_RS01630 PF02690 Na+/Pi-cotransporter SH02_RS01635 PF03575 Peptidase family S51 SH02_RS01640 PF01479 S4 domain SH02_RS01640 PF00849 RNA pseudouridylate synthase SH02_RS01645 PF11656 YjbD family (DUF3811) SH02_RS01650 PF01842 ACT domain SH02_RS01650 PF00696 Amino acid kinase family SH02_RS01655 PF00342 Phosphoglucose isomerase SH02_RS01660 PF03400 IS1 transposase SH02_RS01665 PF12759 InsA C-terminal domain SH02_RS01665 PF03811 InsA N-terminal domain SH02_RS01670 PF11106 Exopolysaccharide production protein YjbE SH02_RS01675 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF SH02_RS01680 PF06251 Capsule biosynthesis GfcC SH02_RS01685 PF06082 Exopolysaccharide biosynthesis protein YbjH SH02_RS01690 PF17089 Uncharacterised protein family SH02_RS01700 PF06146 Phosphate-starvation-inducible E SH02_RS01705 PF00083 Sugar (and other) transporter SH02_RS01710 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS01715 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS01715 PF14785 Maltose transport system permease protein MalF P2 domain SH02_RS01720 PF01547 Bacterial extracellular solute-binding protein SH02_RS01730 PF17912 MalK OB fold domain SH02_RS01730 PF00005 ABC transporter SH02_RS01735 PF02264 LamB porin SH02_RS01740 PF07148 Maltose operon periplasmic protein precursor (MalM) SH02_RS01750 PF13981 SopA-like central domain SH02_RS01750 PF13599 Pentapeptide repeats (9 copies) SH02_RS01755 PF04345 Chorismate lyase SH02_RS01760 PF01040 UbiA prenyltransferase family SH02_RS01765 PF01553 Acyltransferase SH02_RS01770 PF01219 Prokaryotic diacylglycerol kinase SH02_RS01775 PF00717 Peptidase S24-like SH02_RS01775 PF01726 LexA DNA binding domain SH02_RS01780 PF01554 MatE SH02_RS01785 PF05532 CsbD-like SH02_RS01790 PF01475 Ferric uptake regulator family SH02_RS01800 PF10897 Protein of unknown function (DUF2713) SH02_RS01805 PF01207 Dihydrouridine synthase (Dus) SH02_RS01810 PF09583 Phage shock protein G (Phageshock_PspG) SH02_RS01815 PF00107 Zinc-binding dehydrogenase SH02_RS01815 PF08240 Alcohol dehydrogenase GroES-like domain SH02_RS01820 PF03796 DnaB-like helicase C terminal domain SH02_RS01820 PF00772 DnaB-like helicase N terminal domain SH02_RS01825 PF01168 Alanine racemase, N-terminal domain SH02_RS01825 PF00842 Alanine racemase, C-terminal domain SH02_RS01830 PF00155 Aminotransferase class I and II SH02_RS01840 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) SH02_RS01845 PF01894 Uncharacterised protein family UPF0047 SH02_RS01850 PF04237 YjbR SH02_RS01855 PF00005 ABC transporter SH02_RS01855 PF17755 UvrA DNA-binding domain SH02_RS01855 PF17760 UvrA interaction domain SH02_RS01860 PF00436 Single-strand binding protein family SH02_RS01865 PF15940 Family of unknown function SH02_RS01870 PF00563 EAL domain SH02_RS01870 PF12792 CSS motif domain associated with EAL SH02_RS01875 PF12833 Helix-turn-helix domain SH02_RS01880 PF00376 MerR family regulatory protein SH02_RS01880 PF09278 MerR, DNA binding SH02_RS01885 PF00860 Permease family SH02_RS01890 PF00999 Sodium/hydrogen exchanger family SH02_RS01895 PF00805 Pentapeptide repeats (8 copies) SH02_RS01900 PF00474 Sodium:solute symporter family SH02_RS01905 PF04341 Protein of unknown function, DUF485 SH02_RS01910 PF13193 AMP-binding enzyme C-terminal domain SH02_RS01910 PF00501 AMP-binding enzyme SH02_RS01910 PF16177 Acetyl-coenzyme A synthetase N-terminus SH02_RS01915 PF02335 Cytochrome c552 SH02_RS01920 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) SH02_RS01920 PF13435 Cytochrome c554 and c-prime SH02_RS01925 PF00037 4Fe-4S binding domain SH02_RS01925 PF13247 4Fe-4S dicluster domain SH02_RS01930 PF03916 Polysulphide reductase, NrfD SH02_RS01935 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal SH02_RS01935 PF01578 Cytochrome C assembly protein SH02_RS01940 PF03918 Cytochrome C biogenesis protein SH02_RS01950 PF00375 Sodium:dicarboxylate symporter family SH02_RS01955 PF08238 Sel1 repeat SH02_RS01960 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SH02_RS01960 PF00384 Molybdopterin oxidoreductase SH02_RS01960 PF01568 Molydopterin dinucleotide binding domain SH02_RS01965 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SH02_RS01965 PF00384 Molybdopterin oxidoreductase SH02_RS01965 PF01568 Molydopterin dinucleotide binding domain SH02_RS01970 PF02321 Outer membrane efflux protein SH02_RS01975 PF04632 Fusaric acid resistance protein family SH02_RS01980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SH02_RS01980 PF00529 HlyD membrane-fusion protein of T1SS SH02_RS01985 PF17090 Uncharacterised protein family SH02_RS01990 PF00753 Metallo-beta-lactamase superfamily SH02_RS01990 PF14863 Alkyl sulfatase dimerisation SH02_RS01990 PF14864 Alkyl sulfatase C-terminal SH02_RS01995 PF00480 ROK family SH02_RS02000 PF00834 Ribulose-phosphate 3 epimerase family SH02_RS02005 PF02653 Branched-chain amino acid transport system / permease component SH02_RS02010 PF00005 ABC transporter SH02_RS02015 PF13407 Periplasmic binding protein domain SH02_RS02020 PF01418 Helix-turn-helix domain, rpiR family SH02_RS02020 PF01380 SIS domain SH02_RS02025 PF02502 Ribose/Galactose Isomerase SH02_RS02035 PF12706 Beta-lactamase superfamily domain SH02_RS02040 PF00583 Acetyltransferase (GNAT) family SH02_RS02050 PF07969 Amidohydrolase family SH02_RS02055 PF00005 ABC transporter SH02_RS02060 PF00005 ABC transporter SH02_RS02065 PF06007 Phosphonate metabolism protein PhnJ SH02_RS02070 PF05861 Bacterial phosphonate metabolism protein (PhnI) SH02_RS02075 PF05845 Bacterial phosphonate metabolism protein (PhnH) SH02_RS02080 PF06754 Phosphonate metabolism protein PhnG SH02_RS02085 PF07702 UTRA domain SH02_RS02085 PF00392 Bacterial regulatory proteins, gntR family SH02_RS02100 PF00005 ABC transporter SH02_RS02105 PF06983 3-demethylubiquinone-9 3-methyltransferase SH02_RS02110 PF08274 PhnA Zinc-Ribbon SH02_RS02110 PF03831 PhnA domain SH02_RS02115 PF00350 Dynamin family SH02_RS02120 PF13990 YjcZ-like protein SH02_RS02125 PF00083 Sugar (and other) transporter SH02_RS02125 PF08946 Osmosensory transporter coiled coil SH02_RS02135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SH02_RS02135 PF00512 His Kinase A (phospho-acceptor) domain SH02_RS02140 PF00486 Transcriptional regulatory protein, C terminal SH02_RS02140 PF00072 Response regulator receiver domain SH02_RS02145 PF00884 Sulfatase SH02_RS02145 PF08019 Phosphoethanolamine transferase EptA/EptB SH02_RS02150 PF13520 Amino acid permease SH02_RS02155 PF12833 Helix-turn-helix domain SH02_RS02160 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SH02_RS02160 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain SH02_RS02160 PF01276 Orn/Lys/Arg decarboxylase, major domain SH02_RS02165 PF12833 Helix-turn-helix domain SH02_RS02175 PF02056 Family 4 glycosyl hydrolase SH02_RS02175 PF11975 Family 4 glycosyl hydrolase C-terminal domain SH02_RS02185 PF09997 Predicted membrane protein (DUF2238) SH02_RS02190 PF05683 Fumarase C-terminus SH02_RS02190 PF05681 Fumarate hydratase (Fumerase) SH02_RS02195 PF03605 Anaerobic c4-dicarboxylate membrane transporter SH02_RS02205 PF00072 Response regulator receiver domain SH02_RS02210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SH02_RS02210 PF00989 PAS fold SH02_RS02210 PF17203 Single cache domain 3 SH02_RS02210 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain SH02_RS02215 PF06902 Divergent 4Fe-4S mono-cluster SH02_RS02220 PF14542 GCN5-related N-acetyl-transferase SH02_RS02225 PF11080 Endoribonuclease GhoS SH02_RS02230 PF10753 Toxin GhoT_OrtT SH02_RS02235 PF00152 tRNA synthetases class II (D, K and N) SH02_RS02235 PF01336 OB-fold nucleic acid binding domain SH02_RS02240 PF00854 POT family SH02_RS02245 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain SH02_RS02245 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SH02_RS02245 PF01276 Orn/Lys/Arg decarboxylase, major domain SH02_RS02250 PF13520 Amino acid permease SH02_RS02255 PF18500 CadC C-terminal domain 1 SH02_RS02255 PF00486 Transcriptional regulatory protein, C terminal SH02_RS02270 PF11412 Disulphide bond corrector protein DsbC SH02_RS02270 PF02683 Cytochrome C biogenesis protein transmembrane region SH02_RS02275 PF03091 CutA1 divalent ion tolerance protein SH02_RS02280 PF03605 Anaerobic c4-dicarboxylate membrane transporter SH02_RS02285 PF00206 Lyase SH02_RS02285 PF10415 Fumarase C C-terminus SH02_RS02290 PF04186 FxsA cytoplasmic membrane protein SH02_RS02295 PF13520 Amino acid permease SH02_RS02300 PF00166 Chaperonin 10 Kd subunit SH02_RS02305 PF00118 TCP-1/cpn60 chaperonin family SH02_RS02310 PF13698 Domain of unknown function (DUF4156) SH02_RS02315 PF15922 YjeJ-like SH02_RS02320 PF04055 Radical SAM superfamily SH02_RS02325 PF09285 Elongation factor P, C-terminal SH02_RS02325 PF08207 Elongation factor P (EF-P) KOW-like domain SH02_RS02325 PF01132 Elongation factor P (EF-P) OB domain SH02_RS02330 PF08085 Entericidin EcnA/B family SH02_RS02335 PF08085 Entericidin EcnA/B family SH02_RS02340 PF00893 Small Multidrug Resistance protein SH02_RS02345 PF08212 Lipocalin-like domain SH02_RS02350 PF00144 Beta-lactamase SH02_RS02355 PF02313 Fumarate reductase subunit D SH02_RS02360 PF02300 Fumarate reductase subunit C SH02_RS02365 PF13085 2Fe-2S iron-sulfur cluster binding domain SH02_RS02365 PF13183 4Fe-4S dicluster domain SH02_RS02370 PF02910 Fumarate reductase flavoprotein C-term SH02_RS02370 PF00890 FAD binding domain SH02_RS02375 PF00152 tRNA synthetases class II (D, K and N) SH02_RS02380 PF13520 Amino acid permease SH02_RS02390 PF10840 Protein of unknown function (DUF2645) SH02_RS02395 PF00924 Mechanosensitive ion channel SH02_RS02395 PF12794 Mechanosensitive ion channel inner membrane domain 1 SH02_RS02395 PF12795 Mechanosensitive ion channel porin domain SH02_RS02400 PF02666 Phosphatidylserine decarboxylase SH02_RS02405 PF03193 RsgA GTPase SH02_RS02410 PF00929 Exonuclease SH02_RS02430 PF08331 Domain of unknown function (DUF1730) SH02_RS02435 PF01256 Carbohydrate kinase SH02_RS02435 PF03853 YjeF-related protein N-terminus SH02_RS02440 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE SH02_RS02445 PF01520 N-acetylmuramoyl-L-alanine amidase SH02_RS02450 PF08676 MutL C terminal dimerisation domain SH02_RS02450 PF01119 DNA mismatch repair protein, C-terminal domain SH02_RS02460 PF17209 Hfq protein SH02_RS02465 PF01926 50S ribosome-binding GTPase SH02_RS02465 PF13167 GTP-binding GTPase N-terminal SH02_RS02465 PF16360 GTP-binding GTPase Middle Region SH02_RS02470 PF01145 SPFH domain / Band 7 family SH02_RS02470 PF12221 Bacterial membrane protein N terminal SH02_RS02475 PF01145 SPFH domain / Band 7 family SH02_RS02480 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) SH02_RS02485 PF00709 Adenylosuccinate synthetase SH02_RS02490 PF02082 Transcriptional regulator SH02_RS02495 PF17876 Cold shock domain SH02_RS02495 PF00773 RNB domain SH02_RS02495 PF00575 S1 RNA binding domain SH02_RS02495 PF08206 Ribonuclease B OB domain SH02_RS02495 PF08461 Ribonuclease R winged-helix domain SH02_RS02500 PF08032 RNA 2'-O ribose methyltransferase substrate binding SH02_RS02500 PF00588 SpoU rRNA Methylase family SH02_RS02505 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) SH02_RS02510 PF04012 PspA/IM30 family SH02_RS02515 PF10679 Protein of unknown function (DUF2491) SH02_RS02520 PF03994 Domain of Unknown Function (DUF350) SH02_RS02525 PF06693 Protein of unknown function (DUF1190) SH02_RS02530 PF03738 Glutathionylspermidine synthase preATP-grasp SH02_RS02535 PF02770 Acyl-CoA dehydrogenase, middle domain SH02_RS02535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SH02_RS02535 PF18158 Adaptive response protein AidB N-terminal domain SH02_RS02540 PF07338 Protein of unknown function (DUF1471) SH02_RS02545 PF07338 Protein of unknown function (DUF1471) SH02_RS02550 PF00326 Prolyl oligopeptidase family SH02_RS02555 PF08220 DeoR-like helix-turn-helix domain SH02_RS02555 PF00455 DeoR C terminal sensor domain SH02_RS02565 PF03611 PTS system sugar-specific permease component SH02_RS02570 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SH02_RS02575 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SH02_RS02580 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SH02_RS02585 PF01261 Xylose isomerase-like TIM barrel SH02_RS02590 PF00596 Class II Aldolase and Adducin N-terminal domain SH02_RS02595 PF07338 Protein of unknown function (DUF1471) SH02_RS02605 PF01250 Ribosomal protein S6 SH02_RS02610 PF00436 Single-strand binding protein family SH02_RS02615 PF01084 Ribosomal protein S18 SH02_RS02620 PF01281 Ribosomal protein L9, N-terminal domain SH02_RS02620 PF03948 Ribosomal protein L9, C-terminal domain SH02_RS02625 PF10887 Protein of unknown function (DUF2686) SH02_RS02630 PF17938 Tetracyclin repressor-like, C-terminal domain SH02_RS02635 PF04225 Opacity-associated protein A LysM-like domain SH02_RS02635 PF08525 Opacity-associated protein A N-terminal motif SH02_RS02640 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase SH02_RS02640 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SH02_RS02645 PF00324 Amino acid permease SH02_RS02650 PF04405 Domain of Unknown function (DUF542) SH02_RS02650 PF01814 Hemerythrin HHE cation binding domain SH02_RS02655 PF00892 EamA-like transporter family SH02_RS02660 PF05368 NmrA-like family SH02_RS02665 PF01638 HxlR-like helix-turn-helix SH02_RS02670 PF00149 Calcineurin-like phosphoesterase SH02_RS02670 PF02872 5'-nucleotidase, C-terminal domain SH02_RS02675 PF00459 Inositol monophosphatase family SH02_RS02685 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) SH02_RS02690 PF06526 Protein of unknown function (DUF1107) SH02_RS02695 PF01595 Cyclin M transmembrane N-terminal domain SH02_RS02695 PF00571 CBS domain SH02_RS02695 PF03471 Transporter associated domain SH02_RS02700 PF01625 Peptide methionine sulfoxide reductase SH02_RS02710 PF07244 Surface antigen variable number repeat SH02_RS02710 PF17243 POTRA domain TamA domain 1 SH02_RS02710 PF01103 Surface antigen SH02_RS02715 PF04357 TamB, inner membrane protein subunit of TAM complex SH02_RS02720 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like SH02_RS02725 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin SH02_RS02730 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system SH02_RS02735 PF00719 Inorganic pyrophosphatase SH02_RS02740 PF13407 Periplasmic binding protein domain SH02_RS02745 PF00005 ABC transporter SH02_RS02750 PF02653 Branched-chain amino acid transport system / permease component SH02_RS02755 PF02653 Branched-chain amino acid transport system / permease component SH02_RS02760 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain SH02_RS02765 PF02875 Mur ligase family, glutamate ligase domain SH02_RS02765 PF01225 Mur ligase family, catalytic domain SH02_RS02765 PF08245 Mur ligase middle domain SH02_RS02770 PF04751 Protein of unknown function (DUF615) SH02_RS02775 PF01523 Putative modulator of DNA gyrase SH02_RS02780 PF07361 Cytochrome b562 SH02_RS02790 PF03477 ATP cone domain SH02_RS02790 PF13597 Anaerobic ribonucleoside-triphosphate reductase SH02_RS02795 PF00128 Alpha amylase, catalytic domain SH02_RS02795 PF11941 Domain of unknown function (DUF3459) SH02_RS02800 PF00367 phosphotransferase system, EIIB SH02_RS02800 PF02378 Phosphotransferase system, EIIC SH02_RS02805 PF00356 Bacterial regulatory proteins, lacI family SH02_RS02810 PF00690 Cation transporter/ATPase, N-terminus SH02_RS02810 PF00689 Cation transporting ATPase, C-terminus SH02_RS02815 PF01042 Endoribonuclease L-PSP SH02_RS02820 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain SH02_RS02820 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain SH02_RS02825 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SH02_RS02825 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SH02_RS02830 PF08052 PyrBI operon leader peptide SH02_RS02840 PF01042 Endoribonuclease L-PSP SH02_RS02850 PF00440 Bacterial regulatory proteins, tetR family SH02_RS02855 PF04074 YhcH/YjgK/YiaL SH02_RS02865 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SH02_RS02865 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SH02_RS02870 PF06877 Regulator of ribonuclease activity B SH02_RS02875 PF00583 Acetyltransferase (GNAT) family SH02_RS02880 PF05987 Bacterial protein of unknown function (DUF898) SH02_RS02885 PF00133 tRNA synthetases class I (I, L, M and V) SH02_RS02885 PF08264 Anticodon-binding domain of tRNA SH02_RS02885 PF10458 Valyl tRNA synthetase tRNA binding arm SH02_RS02890 PF04364 DNA polymerase III chi subunit, HolC SH02_RS02895 PF02789 Cytosol aminopeptidase family, N-terminal domain SH02_RS02895 PF00883 Cytosol aminopeptidase family, catalytic domain SH02_RS02900 PF03739 Lipopolysaccharide export system permease LptF/LptG SH02_RS02905 PF03739 Lipopolysaccharide export system permease LptF/LptG SH02_RS02910 PF05872 Bacterial protein of unknown function (DUF853) SH02_RS02915 PF00356 Bacterial regulatory proteins, lacI family SH02_RS02920 PF02447 GntP family permease SH02_RS02925 PF00106 short chain dehydrogenase SH02_RS02930 PF08240 Alcohol dehydrogenase GroES-like domain SH02_RS02930 PF00107 Zinc-binding dehydrogenase SH02_RS02935 PF01202 Shikimate kinase SH02_RS02940 PF00107 Zinc-binding dehydrogenase SH02_RS02940 PF08240 Alcohol dehydrogenase GroES-like domain SH02_RS02950 PF00589 Phage integrase family SH02_RS02950 PF13356 Arm DNA-binding domain SH02_RS02960 PF01527 Transposase SH02_RS02965 PF00665 Integrase core domain SH02_RS02965 PF13276 HTH-like domain SH02_RS02995 PF13006 Insertion element 4 transposase N-terminal SH02_RS02995 PF01609 Transposase DDE domain SH02_RS03000 PF07690 Major Facilitator Superfamily SH02_RS03005 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SH02_RS03005 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SH02_RS03010 PF16747 Surface-adhesin protein E SH02_RS03015 PF11700 Vacuole effluxer Atg22 like SH02_RS03020 PF01527 Transposase SH02_RS03025 PF00665 Integrase core domain SH02_RS03025 PF13936 Helix-turn-helix domain SH02_RS03030 PF01527 Transposase SH02_RS03045 PF00005 ABC transporter SH02_RS03050 PF01032 FecCD transport family SH02_RS03055 PF01032 FecCD transport family SH02_RS03060 PF01497 Periplasmic binding protein SH02_RS03065 PF00593 TonB dependent receptor SH02_RS03065 PF07660 Secretin and TonB N terminus short domain SH02_RS03065 PF07715 TonB-dependent Receptor Plug Domain SH02_RS03070 PF04773 FecR protein SH02_RS03070 PF16220 Domain of unknown function (DUF4880) SH02_RS03075 PF04542 Sigma-70 region 2 SH02_RS03075 PF08281 Sigma-70, region 4 SH02_RS03090 PF03400 IS1 transposase SH02_RS03095 PF04198 Putative sugar-binding domain SH02_RS03105 PF02447 GntP family permease SH02_RS03110 PF00920 Dehydratase family SH02_RS03115 PF00701 Dihydrodipicolinate synthetase family SH02_RS03120 PF01614 Bacterial transcriptional regulator SH02_RS03125 PF08220 DeoR-like helix-turn-helix domain SH02_RS03125 PF00455 DeoR C terminal sensor domain SH02_RS03130 PF00834 Ribulose-phosphate 3 epimerase family SH02_RS03135 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SH02_RS03140 PF03437 BtpA family SH02_RS03145 PF03611 PTS system sugar-specific permease component SH02_RS03150 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SH02_RS03155 PF05343 M42 glutamyl aminopeptidase SH02_RS03160 PF13847 Methyltransferase domain SH02_RS03165 PF00583 Acetyltransferase (GNAT) family SH02_RS03170 PF09857 Putative toxin of bacterial toxin-antitoxin pair SH02_RS03185 PF13087 AAA domain SH02_RS03185 PF13091 PLD-like domain SH02_RS03190 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase SH02_RS03200 PF06178 Oligogalacturonate-specific porin protein (KdgM) SH02_RS03215 PF00589 Phage integrase family SH02_RS03220 PF03400 IS1 transposase SH02_RS03225 PF00589 Phage integrase family SH02_RS03235 PF00419 Fimbrial protein SH02_RS03240 PF00419 Fimbrial protein SH02_RS03245 PF02753 Pili assembly chaperone PapD, C-terminal domain SH02_RS03245 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SH02_RS03250 PF13953 PapC C-terminal domain SH02_RS03250 PF13954 PapC N-terminal domain SH02_RS03250 PF00577 Outer membrane usher protein SH02_RS03255 PF00419 Fimbrial protein SH02_RS03265 PF09160 FimH, mannose binding SH02_RS03265 PF00419 Fimbrial protein SH02_RS03270 PF02447 GntP family permease SH02_RS03280 PF03786 D-mannonate dehydratase (UxuA) SH02_RS03285 PF01232 Mannitol dehydrogenase Rossmann domain SH02_RS03285 PF08125 Mannitol dehydrogenase C-terminal domain SH02_RS03295 PF00392 Bacterial regulatory proteins, gntR family SH02_RS03295 PF07729 FCD domain SH02_RS03300 PF10887 Protein of unknown function (DUF2686) SH02_RS03305 PF05598 Transposase domain (DUF772) SH02_RS03305 PF01609 Transposase DDE domain SH02_RS03325 PF04965 Gene 25-like lysozyme SH02_RS03330 PF03466 LysR substrate binding domain SH02_RS03330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS03335 PF01979 Amidohydrolase family SH02_RS03340 PF07670 Nucleoside recognition SH02_RS03345 PF07670 Nucleoside recognition SH02_RS03350 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family SH02_RS03355 PF06779 Uncharacterised MFS-type transporter YbfB SH02_RS03360 PF06977 SdiA-regulated SH02_RS03365 PF11823 Protein of unknown function (DUF3343) SH02_RS03370 PF01869 BadF/BadG/BcrA/BcrD ATPase family SH02_RS03375 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component SH02_RS03380 PF04286 Protein of unknown function (DUF445) SH02_RS03385 PF07690 Major Facilitator Superfamily SH02_RS03395 PF00392 Bacterial regulatory proteins, gntR family SH02_RS03395 PF00155 Aminotransferase class I and II SH02_RS03400 PF06568 Domain of unknown function (DUF1127) SH02_RS03405 PF01636 Phosphotransferase enzyme family SH02_RS03410 PF02492 CobW/HypB/UreG, nucleotide-binding domain SH02_RS03410 PF07683 Cobalamin synthesis protein cobW C-terminal domain SH02_RS03415 PF04328 Selenoprotein, putative SH02_RS03420 PF13722 5TM C-terminal transporter carbon starvation CstA SH02_RS03420 PF02554 Carbon starvation protein CstA SH02_RS03430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SH02_RS03430 PF00672 HAMP domain SH02_RS03430 PF02203 Tar ligand binding domain homologue SH02_RS03435 PF07690 Major Facilitator Superfamily SH02_RS03440 PF07729 FCD domain SH02_RS03440 PF00392 Bacterial regulatory proteins, gntR family SH02_RS03445 PF08240 Alcohol dehydrogenase GroES-like domain SH02_RS03445 PF00107 Zinc-binding dehydrogenase SH02_RS03450 PF00884 Sulfatase SH02_RS03455 PF10696 Protein of unknown function (DUF2501) SH02_RS03460 PF01695 IstB-like ATP binding protein SH02_RS03465 PF17948 DnaT DNA-binding domain SH02_RS03470 PF12821 Threonine/Serine exporter, ThrE SH02_RS03475 PF06738 Putative threonine/serine exporter SH02_RS03480 PF00196 Bacterial regulatory proteins, luxR family SH02_RS03485 PF00196 Bacterial regulatory proteins, luxR family SH02_RS03490 PF11575 FhuF 2Fe-2S C-terminal domain SH02_RS03490 PF06276 Ferric iron reductase FhuF-like transporter SH02_RS03495 PF07256 Protein of unknown function (DUF1435) SH02_RS03515 PF08468 Methyltransferase small domain N-terminal SH02_RS03515 PF05175 Methyltransferase small domain SH02_RS03520 PF03603 DNA polymerase III psi subunit SH02_RS03525 PF00583 Acetyltransferase (GNAT) family SH02_RS03530 PF13419 Haloacid dehalogenase-like hydrolase SH02_RS03535 PF00009 Elongation factor Tu GTP binding domain SH02_RS03535 PF03144 Elongation factor Tu domain 2 SH02_RS03535 PF16658 Class II release factor RF3, C-terminal domain SH02_RS03540 PF04972 BON domain SH02_RS03545 PF07043 Protein of unknown function (DUF1328) SH02_RS03550 PF01734 Patatin-like phospholipase SH02_RS03555 PF01026 TatD related DNase SH02_RS03560 PF04055 Radical SAM superfamily SH02_RS03565 PF11230 Protein of unknown function (DUF3029) SH02_RS03575 PF01791 DeoC/LacD family aldolase SH02_RS03580 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain SH02_RS03580 PF00591 Glycosyl transferase family, a/b domain SH02_RS03580 PF02885 Glycosyl transferase family, helical bundle domain SH02_RS03585 PF01676 Metalloenzyme superfamily SH02_RS03590 PF01048 Phosphorylase superfamily SH02_RS03595 PF07804 HipA-like C-terminal domain SH02_RS03600 PF03099 Biotin/lipoate A/B protein ligase family SH02_RS03600 PF10437 Bacterial lipoate protein ligase C-terminus SH02_RS03605 PF10144 Bacterial virulence factor haemolysin SH02_RS03610 PF18429 Domain of unknown function (DUF5609) SH02_RS03615 PF18073 Rubredoxin metal binding domain SH02_RS03620 PF01381 Helix-turn-helix SH02_RS03620 PF13521 AAA domain SH02_RS03630 PF12848 ABC transporter SH02_RS03630 PF00005 ABC transporter SH02_RS03635 PF01464 Transglycosylase SLT domain SH02_RS03635 PF14718 Soluble lytic murein transglycosylase L domain SH02_RS03640 PF01371 Trp repressor protein SH02_RS03645 PF01931 Protein of unknown function DUF84 SH02_RS03650 PF00300 Histidine phosphatase superfamily (branch 1) SH02_RS03655 PF12833 Helix-turn-helix domain SH02_RS03655 PF06445 GyrI-like small molecule binding domain SH02_RS03660 PF05981 CreA protein SH02_RS03665 PF00072 Response regulator receiver domain SH02_RS03665 PF00486 Transcriptional regulatory protein, C terminal SH02_RS03670 PF00512 His Kinase A (phospho-acceptor) domain SH02_RS03670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SH02_RS03670 PF00672 HAMP domain SH02_RS03675 PF06123 Inner membrane protein CreD SH02_RS03680 PF00072 Response regulator receiver domain SH02_RS03680 PF00486 Transcriptional regulatory protein, C terminal SH02_RS03690 PF00588 SpoU rRNA Methylase family SH02_RS03695 PF08254 Threonine leader peptide SH02_RS03700 PF13840 ACT domain SH02_RS03700 PF00696 Amino acid kinase family SH02_RS03700 PF00742 Homoserine dehydrogenase SH02_RS03700 PF01842 ACT domain SH02_RS03700 PF03447 Homoserine dehydrogenase, NAD binding domain SH02_RS03705 PF08544 GHMP kinases C terminal SH02_RS03705 PF00288 GHMP kinases N terminal domain SH02_RS03710 PF00291 Pyridoxal-phosphate dependent enzyme SH02_RS03710 PF14821 Threonine synthase N terminus SH02_RS03720 PF10697 Protein of unknown function (DUF2502) SH02_RS03725 PF03883 Peroxide stress protein YaaA SH02_RS03730 PF01235 Sodium:alanine symporter family SH02_RS03735 PF00923 Transaldolase/Fructose-6-phosphate aldolase SH02_RS03740 PF00994 Probable molybdopterin binding domain SH02_RS03745 PF01184 GPR1/FUN34/yaaH family SH02_RS03750 PF13099 Domain of unknown function (DUF3944) SH02_RS03750 PF03981 Ubiquinol-cytochrome C chaperone SH02_RS03755 PF10807 Protein of unknown function (DUF2541) SH02_RS03760 PF00012 Hsp70 protein SH02_RS03765 PF00684 DnaJ central domain SH02_RS03765 PF01556 DnaJ C terminal domain SH02_RS03765 PF00226 DnaJ domain SH02_RS03770 PF01609 Transposase DDE domain SH02_RS03775 PF01848 Hok/gef family SH02_RS03780 PF06965 Na+/H+ antiporter 1 SH02_RS03785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS03785 PF03466 LysR substrate binding domain SH02_RS03790 PF03400 IS1 transposase SH02_RS03795 PF01649 Ribosomal protein S20 SH02_RS03800 PF10837 Protein of unknown function (DUF2575) SH02_RS03805 PF06574 FAD synthetase SH02_RS03805 PF01687 Riboflavin kinase SH02_RS03810 PF00133 tRNA synthetases class I (I, L, M and V) SH02_RS03810 PF08264 Anticodon-binding domain of tRNA SH02_RS03810 PF06827 Zinc finger found in FPG and IleRS SH02_RS03815 PF01252 Signal peptidase (SPase) II SH02_RS03820 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SH02_RS03825 PF02401 LytB protein SH02_RS03830 PF01156 Inosine-uridine preferring nucleoside hydrolase SH02_RS03835 PF01113 Dihydrodipicolinate reductase, N-terminus SH02_RS03835 PF05173 Dihydrodipicolinate reductase, C-terminus SH02_RS03850 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SH02_RS03850 PF00117 Glutamine amidotransferase class-I SH02_RS03855 PF02142 MGS-like domain SH02_RS03855 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SH02_RS03855 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SH02_RS03865 PF07180 CaiF/GrlA transcriptional regulator SH02_RS03870 PF00132 Bacterial transferase hexapeptide (six repeats) SH02_RS03875 PF00378 Enoyl-CoA hydratase/isomerase SH02_RS03880 PF00501 AMP-binding enzyme SH02_RS03880 PF13193 AMP-binding enzyme C-terminal domain SH02_RS03885 PF02515 CoA-transferase family III SH02_RS03890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SH02_RS03890 PF02770 Acyl-CoA dehydrogenase, middle domain SH02_RS03890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SH02_RS03895 PF02028 BCCT, betaine/carnitine/choline family transporter SH02_RS03900 PF01012 Electron transfer flavoprotein domain SH02_RS03905 PF01012 Electron transfer flavoprotein domain SH02_RS03905 PF00766 Electron transfer flavoprotein FAD-binding domain SH02_RS03910 PF01494 FAD binding domain SH02_RS03920 PF00083 Sugar (and other) transporter SH02_RS03925 PF02525 Flavodoxin-like fold SH02_RS03930 PF02254 TrkA-N domain SH02_RS03930 PF00999 Sodium/hydrogen exchanger family SH02_RS03935 PF00186 Dihydrofolate reductase SH02_RS03940 PF00149 Calcineurin-like phosphoesterase SH02_RS03945 PF04379 ApaG domain SH02_RS03950 PF00398 Ribosomal RNA adenine dimethylase SH02_RS03955 PF04166 Pyridoxal phosphate biosynthetic protein PdxA SH02_RS03960 PF00639 PPIC-type PPIASE domain SH02_RS03960 PF09312 SurA N-terminal domain SH02_RS03965 PF03968 OstA-like protein SH02_RS03965 PF04453 LPS transport system D SH02_RS03970 PF00226 DnaJ domain SH02_RS03970 PF05099 Tellurite resistance protein TerB SH02_RS03980 PF00849 RNA pseudouridylate synthase SH02_RS03985 PF12137 RNA polymerase recycling family C-terminal SH02_RS03985 PF00176 SNF2 family N-terminal domain SH02_RS03985 PF18339 RapA N-terminal Tudor like domain 1 SH02_RS03985 PF18337 RapA N-terminal Tudor like domain SH02_RS03985 PF00271 Helicase conserved C-terminal domain SH02_RS03990 PF00136 DNA polymerase family B SH02_RS03990 PF03104 DNA polymerase family B, exonuclease domain SH02_RS03995 PF00596 Class II Aldolase and Adducin N-terminal domain SH02_RS04000 PF11762 L-arabinose isomerase C-terminal domain SH02_RS04000 PF02610 L-arabinose isomerase SH02_RS04005 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SH02_RS04010 PF02311 AraC-like ligand binding domain SH02_RS04010 PF12833 Helix-turn-helix domain SH02_RS04015 PF09335 SNARE associated Golgi protein SH02_RS04020 PF00005 ABC transporter SH02_RS04025 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS04035 PF12793 Sugar transport-related sRNA regulator N-term SH02_RS04035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SH02_RS04045 PF07690 Major Facilitator Superfamily SH02_RS04050 PF00694 Aconitase C-terminal domain SH02_RS04055 PF00330 Aconitase family (aconitate hydratase) SH02_RS04060 PF00180 Isocitrate/isopropylmalate dehydrogenase SH02_RS04065 PF08502 LeuA allosteric (dimerisation) domain SH02_RS04065 PF00682 HMGL-like SH02_RS04070 PF08054 Leucine operon leader peptide SH02_RS04075 PF03466 LysR substrate binding domain SH02_RS04075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS04080 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SH02_RS04080 PF00205 Thiamine pyrophosphate enzyme, central domain SH02_RS04080 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SH02_RS04085 PF10369 Small subunit of acetolactate synthase SH02_RS04095 PF00356 Bacterial regulatory proteins, lacI family SH02_RS04095 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SH02_RS04100 PF02381 MraZ protein, putative antitoxin-like SH02_RS04105 PF01795 MraW methylase family SH02_RS04110 PF04999 Cell division protein FtsL SH02_RS04115 PF00905 Penicillin binding protein transpeptidase domain SH02_RS04115 PF03717 Penicillin-binding Protein dimerisation domain SH02_RS04120 PF01225 Mur ligase family, catalytic domain SH02_RS04120 PF02875 Mur ligase family, glutamate ligase domain SH02_RS04120 PF08245 Mur ligase middle domain SH02_RS04125 PF02875 Mur ligase family, glutamate ligase domain SH02_RS04125 PF08245 Mur ligase middle domain SH02_RS04125 PF01225 Mur ligase family, catalytic domain SH02_RS04130 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SH02_RS04130 PF00953 Glycosyl transferase family 4 SH02_RS04135 PF08245 Mur ligase middle domain SH02_RS04135 PF02875 Mur ligase family, glutamate ligase domain SH02_RS04140 PF01098 Cell cycle protein SH02_RS04145 PF04101 Glycosyltransferase family 28 C-terminal domain SH02_RS04145 PF03033 Glycosyltransferase family 28 N-terminal domain SH02_RS04150 PF01225 Mur ligase family, catalytic domain SH02_RS04150 PF02875 Mur ligase family, glutamate ligase domain SH02_RS04150 PF08245 Mur ligase middle domain SH02_RS04155 PF07478 D-ala D-ala ligase C-terminus SH02_RS04155 PF01820 D-ala D-ala ligase N-terminus SH02_RS04160 PF08478 POTRA domain, FtsQ-type SH02_RS04160 PF03799 Cell division protein FtsQ SH02_RS04165 PF02491 SHS2 domain inserted in FTSA SH02_RS04170 PF00091 Tubulin/FtsZ family, GTPase domain SH02_RS04170 PF12327 FtsZ family, C-terminal domain SH02_RS04175 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase SH02_RS04180 PF06558 Secretion monitor precursor protein (SecM) SH02_RS04185 PF07517 SecA DEAD-like domain SH02_RS04185 PF02810 SEC-C motif SH02_RS04185 PF07516 SecA Wing and Scaffold domain SH02_RS04185 PF01043 SecA preprotein cross-linking domain SH02_RS04190 PF00293 NUDIX domain SH02_RS04200 PF03884 DNA gyrase inhibitor YacG SH02_RS04205 PF07072 Cell division protein SH02_RS04210 PF01121 Dephospho-CoA kinase SH02_RS04215 PF00478 IMP dehydrogenase / GMP reductase domain SH02_RS04220 PF00482 Type II secretion system (T2SS), protein F SH02_RS04225 PF00437 Type II/IV secretion system protein SH02_RS04225 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain SH02_RS04230 PF07963 Prokaryotic N-terminal methylation motif SH02_RS04240 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain SH02_RS04240 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain SH02_RS04245 PF01510 N-acetylmuramoyl-L-alanine amidase SH02_RS04250 PF17113 Regulatory signalling modulator protein AmpE SH02_RS04255 PF00324 Amino acid permease SH02_RS04260 PF00392 Bacterial regulatory proteins, gntR family SH02_RS04260 PF07729 FCD domain SH02_RS04265 PF17831 Pyruvate dehydrogenase E1 component middle domain SH02_RS04265 PF00456 Transketolase, thiamine diphosphate binding domain SH02_RS04270 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SH02_RS04270 PF00364 Biotin-requiring enzyme SH02_RS04270 PF02817 e3 binding domain SH02_RS04275 PF07992 Pyridine nucleotide-disulphide oxidoreductase SH02_RS04275 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SH02_RS04280 PF11737 Protein of unknown function (DUF3300) SH02_RS04285 PF06434 Aconitate hydratase 2 N-terminus SH02_RS04285 PF00330 Aconitase family (aconitate hydratase) SH02_RS04285 PF11791 Aconitate B N-terminal domain SH02_RS04290 PF06062 Uncharacterised protein family (UPF0231) SH02_RS04295 PF02675 S-adenosylmethionine decarboxylase SH02_RS04300 PF17284 Spermidine synthase tetramerisation domain SH02_RS04305 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) SH02_RS04310 PF00394 Multicopper oxidase SH02_RS04310 PF07731 Multicopper oxidase SH02_RS04310 PF07732 Multicopper oxidase SH02_RS04315 PF01011 PQQ enzyme repeat SH02_RS04320 PF00156 Phosphoribosyl transferase domain SH02_RS04325 PF00484 Carbonic anhydrase SH02_RS04330 PF00005 ABC transporter SH02_RS04335 PF01061 ABC-2 type transporter SH02_RS04340 PF03610 PTS system fructose IIA component SH02_RS04345 PF01522 Polysaccharide deacetylase SH02_RS04350 PF02261 Aspartate decarboxylase SH02_RS04355 PF04754 Putative transposase, YhgA-like SH02_RS04360 PF02569 Pantoate-beta-alanine ligase SH02_RS04365 PF02548 Ketopantoate hydroxymethyltransferase SH02_RS04370 PF00419 Fimbrial protein SH02_RS04375 PF00419 Fimbrial protein SH02_RS04380 PF00419 Fimbrial protein SH02_RS04385 PF00419 Fimbrial protein SH02_RS04390 PF13954 PapC N-terminal domain SH02_RS04390 PF13953 PapC C-terminal domain SH02_RS04390 PF00577 Outer membrane usher protein SH02_RS04395 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SH02_RS04395 PF02753 Pili assembly chaperone PapD, C-terminal domain SH02_RS04400 PF00419 Fimbrial protein SH02_RS04405 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SH02_RS04410 PF12627 Probable RNA and SrmB- binding site of polymerase A SH02_RS04410 PF12626 Polymerase A arginine-rich C-terminus SH02_RS04410 PF01743 Poly A polymerase head domain SH02_RS04415 PF00749 tRNA synthetases class I (E and Q), catalytic domain SH02_RS04420 PF01258 Prokaryotic dksA/traR C4-type zinc finger SH02_RS04425 PF03749 Sugar fermentation stimulation protein RE domain SH02_RS04425 PF17746 SfsA N-terminal OB domain SH02_RS04430 PF02834 LigT like Phosphoesterase SH02_RS04435 PF00270 DEAD/DEAH box helicase SH02_RS04435 PF00271 Helicase conserved C-terminal domain SH02_RS04435 PF04408 Helicase associated domain (HA2) SH02_RS04435 PF08482 ATP-dependent helicase C-terminal SH02_RS04445 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal SH02_RS04445 PF00912 Transglycosylase SH02_RS04445 PF00905 Penicillin binding protein transpeptidase domain SH02_RS04445 PF14814 Bifunctional transglycosylase second domain SH02_RS04450 PF07715 TonB-dependent Receptor Plug Domain SH02_RS04450 PF00593 TonB dependent receptor SH02_RS04455 PF00665 Integrase core domain SH02_RS04455 PF13276 HTH-like domain SH02_RS04460 PF01527 Transposase SH02_RS04465 PF00593 TonB dependent receptor SH02_RS04465 PF07715 TonB-dependent Receptor Plug Domain SH02_RS04470 PF00005 ABC transporter SH02_RS04475 PF01497 Periplasmic binding protein SH02_RS04480 PF01032 FecCD transport family SH02_RS04485 PF00202 Aminotransferase class-III SH02_RS04490 PF00654 Voltage gated chloride channel SH02_RS04495 PF01521 Iron-sulphur cluster biosynthesis SH02_RS04500 PF03458 UPF0126 domain SH02_RS04505 PF01497 Periplasmic binding protein SH02_RS04510 PF01048 Phosphorylase superfamily SH02_RS04515 PF13286 Phosphohydrolase-associated domain SH02_RS04515 PF01966 HD domain SH02_RS04520 PF00595 PDZ domain SH02_RS04525 PF13556 PucR C-terminal helix-turn-helix domain SH02_RS04525 PF05651 Putative sugar diacid recognition SH02_RS04525 PF17853 GGDEF-like domain SH02_RS04530 PF11944 Protein of unknown function (DUF3461) SH02_RS04535 PF00149 Calcineurin-like phosphoesterase SH02_RS04540 PF14602 Hexapeptide repeat of succinyl-transferase SH02_RS04540 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal SH02_RS04540 PF00132 Bacterial transferase hexapeptide (six repeats) SH02_RS04545 PF01966 HD domain SH02_RS04545 PF08335 GlnD PII-uridylyltransferase SH02_RS04545 PF01909 Nucleotidyltransferase domain SH02_RS04545 PF01842 ACT domain SH02_RS04550 PF00557 Metallopeptidase family M24 SH02_RS04555 PF00318 Ribosomal protein S2 SH02_RS04560 PF00889 Elongation factor TS SH02_RS04565 PF00696 Amino acid kinase family SH02_RS04570 PF01765 Ribosome recycling factor SH02_RS04575 PF13288 DXP reductoisomerase C-terminal domain SH02_RS04575 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain SH02_RS04575 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase SH02_RS04580 PF01255 Putative undecaprenyl diphosphate synthase SH02_RS04590 PF17820 PDZ domain SH02_RS04590 PF02163 Peptidase family M50 SH02_RS04595 PF01103 Surface antigen SH02_RS04595 PF07244 Surface antigen variable number repeat SH02_RS04600 PF03938 Outer membrane protein (OmpH-like) SH02_RS04605 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD SH02_RS04605 PF00132 Bacterial transferase hexapeptide (six repeats) SH02_RS04610 PF07977 FabA-like domain SH02_RS04615 PF00132 Bacterial transferase hexapeptide (six repeats) SH02_RS04615 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 SH02_RS04620 PF02684 Lipid-A-disaccharide synthetase SH02_RS04625 PF01351 Ribonuclease HII SH02_RS04630 PF14579 Helix-hairpin-helix motif SH02_RS04630 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SH02_RS04630 PF02811 PHP domain SH02_RS04630 PF01336 OB-fold nucleic acid binding domain SH02_RS04630 PF07733 Bacterial DNA polymerase III alpha NTPase domain SH02_RS04635 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SH02_RS04640 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SH02_RS04640 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain SH02_RS04640 PF01276 Orn/Lys/Arg decarboxylase, major domain SH02_RS04645 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SH02_RS04650 PF01171 PP-loop family SH02_RS04650 PF09179 TilS substrate binding domain SH02_RS04650 PF11734 TilS substrate C-terminal domain SH02_RS04655 PF07073 Modulator of Rho-dependent transcription termination (ROF) SH02_RS04660 PF06786 Uncharacterised protein family (UPF0253) SH02_RS04665 PF07152 YaeQ protein SH02_RS04670 PF00472 RF-1 domain SH02_RS04675 PF17185 NlpE C-terminal OB domain SH02_RS04675 PF04170 NlpE N-terminal domain SH02_RS04680 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family SH02_RS04685 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SH02_RS04685 PF04073 Aminoacyl-tRNA editing domain SH02_RS04685 PF03129 Anticodon binding domain SH02_RS04690 PF18389 TrmO C-terminal domain SH02_RS04690 PF01980 tRNA-methyltransferase O SH02_RS04695 PF16358 RcsF lipoprotein SH02_RS04700 PF03180 NLPA lipoprotein SH02_RS04705 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS04710 PF00005 ABC transporter SH02_RS04710 PF09383 NIL domain SH02_RS04750 PF00248 Aldo/keto reductase family SH02_RS04755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS04755 PF03466 LysR substrate binding domain SH02_RS04760 PF03372 Endonuclease/Exonuclease/phosphatase family SH02_RS04765 PF08241 Methyltransferase domain SH02_RS04770 PF01464 Transglycosylase SLT domain SH02_RS04770 PF01476 LysM domain SH02_RS04775 PF16123 Hydroxyacylglutathione hydrolase C-terminus SH02_RS04775 PF00753 Metallo-beta-lactamase superfamily SH02_RS04780 PF08241 Methyltransferase domain SH02_RS04785 PF00075 RNase H SH02_RS04790 PF00929 Exonuclease SH02_RS04815 PF01609 Transposase DDE domain SH02_RS04815 PF13808 DDE_Tnp_1-associated SH02_RS04820 PF00795 Carbon-nitrogen hydrolase SH02_RS04830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SH02_RS04830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SH02_RS04830 PF09317 Domain of unknown function (DUF1974) SH02_RS04830 PF02770 Acyl-CoA dehydrogenase, middle domain SH02_RS04835 PF13580 SIS domain SH02_RS04840 PF13230 Glutamine amidotransferases class-II SH02_RS04845 PF03734 L,D-transpeptidase catalytic domain SH02_RS04850 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ SH02_RS04855 PF04221 RelB antitoxin SH02_RS04860 PF00877 NlpC/P60 family SH02_RS04870 PF00771 FHIPEP family SH02_RS04875 PF00691 OmpA family SH02_RS04875 PF13677 Membrane MotB of proton-channel complex MotA/MotB SH02_RS04880 PF11799 impB/mucB/samB family C-terminal domain SH02_RS04880 PF11798 IMS family HHH motif SH02_RS04880 PF00817 impB/mucB/samB family SH02_RS04890 PF13957 Toxin YafO, type II toxin-antitoxin system SH02_RS04895 PF13673 Acetyltransferase (GNAT) domain SH02_RS04905 PF00472 RF-1 domain SH02_RS04910 PF07687 Peptidase dimerisation domain SH02_RS04910 PF01546 Peptidase family M20/M25/M40 SH02_RS04915 PF00156 Phosphoribosyl transferase domain SH02_RS04920 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) SH02_RS04925 PF07417 Sigma factor-binding transcriptional regulator Crl SH02_RS04930 PF00267 Gram-negative porin SH02_RS04935 PF00696 Amino acid kinase family SH02_RS04935 PF01472 PUA domain SH02_RS04940 PF00171 Aldehyde dehydrogenase family SH02_RS04950 PF06755 CbtA_toxin of type IV toxin-antitoxin system SH02_RS04955 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A SH02_RS04960 PF04002 RadC-like JAB domain SH02_RS04965 PF03230 Antirestriction protein SH02_RS04970 PF06006 Bacterial protein of unknown function (DUF905) SH02_RS04990 PF06067 Domain of unknown function (DUF932) SH02_RS04995 PF01926 50S ribosome-binding GTPase SH02_RS05000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS05000 PF03466 LysR substrate binding domain SH02_RS05005 PF01527 Transposase SH02_RS05010 PF00665 Integrase core domain SH02_RS05010 PF13936 Helix-turn-helix domain SH02_RS05030 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) SH02_RS05035 PF01609 Transposase DDE domain SH02_RS05035 PF05598 Transposase domain (DUF772) SH02_RS05040 PF00324 Amino acid permease SH02_RS05045 PF02574 Homocysteine S-methyltransferase SH02_RS05050 PF08402 TOBE domain SH02_RS05050 PF00005 ABC transporter SH02_RS05055 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS05060 PF03400 IS1 transposase SH02_RS05065 PF12759 InsA C-terminal domain SH02_RS05065 PF03811 InsA N-terminal domain SH02_RS05070 PF01527 Transposase SH02_RS05075 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A SH02_RS05080 PF00665 Integrase core domain SH02_RS05085 PF00701 Dihydrodipicolinate synthetase family SH02_RS05090 PF00920 Dehydratase family SH02_RS05100 PF04616 Glycosyl hydrolases family 43 SH02_RS05100 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain SH02_RS05105 PF01614 Bacterial transcriptional regulator SH02_RS05105 PF09339 IclR helix-turn-helix domain SH02_RS05110 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SH02_RS05110 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SH02_RS05115 PF03400 IS1 transposase SH02_RS05130 PF07638 ECF sigma factor SH02_RS05150 PF00589 Phage integrase family SH02_RS05150 PF13356 Arm DNA-binding domain SH02_RS05160 PF03466 LysR substrate binding domain SH02_RS05165 PF13478 XdhC Rossmann domain SH02_RS05165 PF02625 XdhC and CoxI family SH02_RS05170 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain SH02_RS05170 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase SH02_RS05175 PF03450 CO dehydrogenase flavoprotein C-terminal domain SH02_RS05175 PF00941 FAD binding domain in molybdopterin dehydrogenase SH02_RS05180 PF00111 2Fe-2S iron-sulfur cluster binding domain SH02_RS05180 PF01799 [2Fe-2S] binding domain SH02_RS05185 PF07274 Protein of unknown function (DUF1440) SH02_RS05190 PF03692 Putative zinc- or iron-chelating domain SH02_RS05205 PF16967 E-set like domain SH02_RS05205 PF15976 CS1-pili formation C-terminal SH02_RS05210 PF18649 EcpB C-terminal domain SH02_RS05215 PF16449 Fimbrillin MatB SH02_RS05220 PF00196 Bacterial regulatory proteins, luxR family SH02_RS05230 PF00444 Ribosomal protein L36 SH02_RS05235 PF01197 Ribosomal protein L31 SH02_RS05245 PF11924 Inverse autotransporter, beta-domain SH02_RS05250 PF01527 Transposase SH02_RS05255 PF13333 Integrase core domain SH02_RS05255 PF13276 HTH-like domain SH02_RS05255 PF00665 Integrase core domain SH02_RS05260 PF12833 Helix-turn-helix domain SH02_RS05265 PF04224 Protein of unknown function, DUF417 SH02_RS05270 PF07338 Protein of unknown function (DUF1471) SH02_RS05275 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SH02_RS05275 PF07992 Pyridine nucleotide-disulphide oxidoreductase SH02_RS05280 PF12852 Cupin SH02_RS05280 PF12833 Helix-turn-helix domain SH02_RS05285 PF02754 Cysteine-rich domain SH02_RS05290 PF13183 4Fe-4S dicluster domain SH02_RS05290 PF02589 LUD domain SH02_RS05290 PF11870 Domain of unknown function (DUF3390) SH02_RS05295 PF02589 LUD domain SH02_RS05310 PF05199 GMC oxidoreductase SH02_RS05310 PF00732 GMC oxidoreductase SH02_RS05315 PF00171 Aldehyde dehydrogenase family SH02_RS05320 PF00440 Bacterial regulatory proteins, tetR family SH02_RS05320 PF13977 BetI-type transcriptional repressor, C-terminal SH02_RS05325 PF02028 BCCT, betaine/carnitine/choline family transporter SH02_RS05335 PF00563 EAL domain SH02_RS05335 PF00196 Bacterial regulatory proteins, luxR family SH02_RS05340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS05340 PF03466 LysR substrate binding domain SH02_RS05345 PF06496 Protein of unknown function (DUF1097) SH02_RS05350 PF12796 Ankyrin repeats (3 copies) SH02_RS05355 PF11392 Protein of unknown function (DUF2877) SH02_RS05360 PF00549 CoA-ligase SH02_RS05360 PF02629 CoA binding domain SH02_RS05365 PF06545 Protein of unknown function (DUF1116) SH02_RS05375 PF00696 Amino acid kinase family SH02_RS05380 PF07969 Amidohydrolase family SH02_RS05385 PF00107 Zinc-binding dehydrogenase SH02_RS05385 PF08240 Alcohol dehydrogenase GroES-like domain SH02_RS05400 PF01810 LysE type translocator SH02_RS05405 PF07338 Protein of unknown function (DUF1471) SH02_RS05410 PF06506 Propionate catabolism activator SH02_RS05410 PF00158 Sigma-54 interaction domain SH02_RS05410 PF02954 Bacterial regulatory protein, Fis family SH02_RS05420 PF00285 Citrate synthase, C-terminal domain SH02_RS05425 PF03972 MmgE/PrpD family SH02_RS05430 PF13193 AMP-binding enzyme C-terminal domain SH02_RS05430 PF00501 AMP-binding enzyme SH02_RS05430 PF16177 Acetyl-coenzyme A synthetase N-terminus SH02_RS05435 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin SH02_RS05440 PF07969 Amidohydrolase family SH02_RS05445 PF03466 LysR substrate binding domain SH02_RS05445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS05450 PF00484 Carbonic anhydrase SH02_RS05455 PF02560 Cyanate lyase C-terminal domain SH02_RS05460 PF07690 Major Facilitator Superfamily SH02_RS05465 PF12464 Maltose acetyltransferase SH02_RS05465 PF00132 Bacterial transferase hexapeptide (six repeats) SH02_RS05470 PF01306 LacY proton/sugar symporter SH02_RS05475 PF02837 Glycosyl hydrolases family 2, sugar binding domain SH02_RS05475 PF02836 Glycosyl hydrolases family 2, TIM barrel domain SH02_RS05475 PF00703 Glycosyl hydrolases family 2 SH02_RS05475 PF16353 Domain of unknown function(DUF4981) SH02_RS05475 PF02929 Beta galactosidase small chain SH02_RS05480 PF00356 Bacterial regulatory proteins, lacI family SH02_RS05485 PF01614 Bacterial transcriptional regulator SH02_RS05485 PF09339 IclR helix-turn-helix domain SH02_RS05490 PF01494 FAD binding domain SH02_RS05495 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase SH02_RS05500 PF12697 Alpha/beta hydrolase family SH02_RS05505 PF01557 Fumarylacetoacetate (FAA) hydrolase family SH02_RS05510 PF01118 Semialdehyde dehydrogenase, NAD binding domain SH02_RS05510 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation SH02_RS05515 PF07836 DmpG-like communication domain SH02_RS05515 PF00682 HMGL-like SH02_RS05520 PF07690 Major Facilitator Superfamily SH02_RS05525 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) SH02_RS05530 PF00756 Putative esterase SH02_RS05535 PF08240 Alcohol dehydrogenase GroES-like domain SH02_RS05535 PF00107 Zinc-binding dehydrogenase SH02_RS05540 PF02583 Metal-sensitive transcriptional repressor SH02_RS05550 PF00132 Bacterial transferase hexapeptide (six repeats) SH02_RS05555 PF01527 Transposase SH02_RS05560 PF00665 Integrase core domain SH02_RS05560 PF13276 HTH-like domain SH02_RS05565 PF00535 Glycosyl transferase family 2 SH02_RS05570 PF02585 GlcNAc-PI de-N-acetylase SH02_RS05575 PF04069 Substrate binding domain of ABC-type glycine betaine transport system SH02_RS05580 PF00005 ABC transporter SH02_RS05585 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS05590 PF02668 Taurine catabolism dioxygenase TauD, TfdA family SH02_RS05595 PF00490 Delta-aminolevulinic acid dehydratase SH02_RS05610 PF13276 HTH-like domain SH02_RS05610 PF00665 Integrase core domain SH02_RS05610 PF13333 Integrase core domain SH02_RS05615 PF01527 Transposase SH02_RS05620 PF03797 Autotransporter beta-domain SH02_RS05620 PF03212 Pertactin SH02_RS05625 PF15977 Winged helix-turn-helix DNA binding SH02_RS05630 PF00144 Beta-lactamase SH02_RS05640 PF05992 SbmA/BacA-like family SH02_RS05645 PF07759 Protein of unknown function (DUF1615) SH02_RS05650 PF10954 Protein of unknown function (DUF2755) SH02_RS05655 PF10953 Protein of unknown function (DUF2754) SH02_RS05660 PF07478 D-ala D-ala ligase C-terminus SH02_RS05660 PF01820 D-ala D-ala ligase N-terminus SH02_RS05670 PF10796 Sigma-S stabilisation anti-adaptor protein SH02_RS05675 PF00245 Alkaline phosphatase SH02_RS05680 PF07769 psiF repeat SH02_RS05685 PF05230 MASE2 domain SH02_RS05685 PF00990 Diguanylate cyclase, GGDEF domain SH02_RS05690 PF03807 NADP oxidoreductase coenzyme F420-dependent SH02_RS05690 PF14748 Pyrroline-5-carboxylate reductase dimerisation SH02_RS05695 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 SH02_RS05700 PF01202 Shikimate kinase SH02_RS05705 PF16362 YaiA protein SH02_RS05715 PF07302 AroM protein SH02_RS05720 PF06865 Pyrimidine/purine nucleoside phosphorylase SH02_RS05725 PF10971 Protein of unknown function (DUF2773) SH02_RS05730 PF04381 Putative exonuclease, RdgC SH02_RS05735 PF00480 ROK family SH02_RS05740 PF07690 Major Facilitator Superfamily SH02_RS05745 PF13476 AAA domain SH02_RS05750 PF12320 Type 5 capsule protein repressor C-terminal domain SH02_RS05750 PF00149 Calcineurin-like phosphoesterase SH02_RS05755 PF00486 Transcriptional regulatory protein, C terminal SH02_RS05755 PF00072 Response regulator receiver domain SH02_RS05760 PF11808 Phosphate regulon sensor protein PhoR SH02_RS05760 PF00989 PAS fold SH02_RS05760 PF00512 His Kinase A (phospho-acceptor) domain SH02_RS05760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SH02_RS05765 PF05525 Branched-chain amino acid transport protein SH02_RS05770 PF00324 Amino acid permease SH02_RS05775 PF02903 Alpha amylase, N-terminal ig-like domain SH02_RS05775 PF00128 Alpha amylase, catalytic domain SH02_RS05780 PF04336 Acyl carrier protein phosphodiesterase SH02_RS05785 PF02547 Queuosine biosynthesis protein SH02_RS05790 PF01702 Queuine tRNA-ribosyltransferase SH02_RS05795 PF02699 Preprotein translocase subunit SH02_RS05800 PF13721 SecD export protein N-terminal TM region SH02_RS05800 PF07549 SecD/SecF GG Motif SH02_RS05800 PF02355 Protein export membrane protein SH02_RS05805 PF02355 Protein export membrane protein SH02_RS05805 PF07549 SecD/SecF GG Motif SH02_RS05810 PF01844 HNH endonuclease SH02_RS05820 PF03502 Nucleoside-specific channel-forming protein, Tsx SH02_RS05825 PF11622 Protein of unknown function (DUF3251) SH02_RS05830 PF03477 ATP cone domain SH02_RS05835 PF01872 RibD C-terminal domain SH02_RS05835 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SH02_RS05840 PF00885 6,7-dimethyl-8-ribityllumazine synthase SH02_RS05845 PF01029 NusB family SH02_RS05850 PF02769 AIR synthase related protein, C-terminal domain SH02_RS05850 PF00586 AIR synthase related protein, N-terminal domain SH02_RS05855 PF04608 Phosphatidylglycerophosphatase A SH02_RS05860 PF00248 Aldo/keto reductase family SH02_RS05865 PF02779 Transketolase, pyrimidine binding domain SH02_RS05865 PF13292 1-deoxy-D-xylulose-5-phosphate synthase SH02_RS05865 PF02780 Transketolase, C-terminal domain SH02_RS05870 PF00348 Polyprenyl synthetase SH02_RS05875 PF02609 Exonuclease VII small subunit SH02_RS05880 PF02568 Thiamine biosynthesis protein (ThiI) SH02_RS05880 PF02926 THUMP domain SH02_RS05885 PF01965 DJ-1/PfpI family SH02_RS05890 PF02558 Ketopantoate reductase PanE/ApbA SH02_RS05890 PF08546 Ketopantoate reductase PanE/ApbA C terminal SH02_RS05895 PF04461 Protein of unknown function (DUF520) SH02_RS05900 PF07690 Major Facilitator Superfamily SH02_RS05905 PF01040 UbiA prenyltransferase family SH02_RS05910 PF03626 Prokaryotic Cytochrome C oxidase subunit IV SH02_RS05915 PF00510 Cytochrome c oxidase subunit III SH02_RS05920 PF00115 Cytochrome C and Quinol oxidase polypeptide I SH02_RS05925 PF00116 Cytochrome C oxidase subunit II, periplasmic domain SH02_RS05925 PF06481 COX Aromatic Rich Motif SH02_RS05930 PF07690 Major Facilitator Superfamily SH02_RS05935 PF08139 Prokaryotic membrane lipoprotein lipid attachment site SH02_RS05935 PF03923 Uncharacterized lipoprotein SH02_RS05940 PF01722 BolA-like protein SH02_RS05950 PF05697 Bacterial trigger factor protein (TF) SH02_RS05950 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SH02_RS05950 PF05698 Bacterial trigger factor protein (TF) C-terminus SH02_RS05955 PF00574 Clp protease SH02_RS05960 PF06689 ClpX C4-type zinc finger SH02_RS05960 PF10431 C-terminal, D2-small domain, of ClpB protein SH02_RS05960 PF07724 AAA domain (Cdc48 subfamily) SH02_RS05965 PF05362 Lon protease (S16) C-terminal proteolytic domain SH02_RS05965 PF00004 ATPase family associated with various cellular activities (AAA) SH02_RS05965 PF02190 ATP-dependent protease La (LON) substrate-binding domain SH02_RS05970 PF00216 Bacterial DNA-binding protein SH02_RS05975 PF13145 PPIC-type PPIASE domain SH02_RS05990 PF06508 Queuosine biosynthesis protein QueC SH02_RS05995 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SH02_RS05995 PF12793 Sugar transport-related sRNA regulator N-term SH02_RS06005 PF01037 Lrp/AsnC ligand binding domain SH02_RS06005 PF13404 AsnC-type helix-turn-helix domain SH02_RS06010 PF00664 ABC transporter transmembrane region SH02_RS06010 PF00005 ABC transporter SH02_RS06015 PF00664 ABC transporter transmembrane region SH02_RS06015 PF00005 ABC transporter SH02_RS06020 PF00543 Nitrogen regulatory protein P-II SH02_RS06025 PF00909 Ammonium Transporter Family SH02_RS06035 PF09619 Type III secretion system lipoprotein chaperone (YscW) SH02_RS06040 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SH02_RS06045 PF07237 Protein of unknown function (DUF1428) SH02_RS06050 PF12792 CSS motif domain associated with EAL SH02_RS06050 PF00563 EAL domain SH02_RS06055 PF10777 Inner membrane protein YlaC SH02_RS06060 PF12464 Maltose acetyltransferase SH02_RS06060 PF14602 Hexapeptide repeat of succinyl-transferase SH02_RS06065 PF05321 Haemolysin expression modulating protein SH02_RS06070 PF10757 Biofilm formation regulator YbaJ SH02_RS06075 PF00873 AcrB/AcrD/AcrF family SH02_RS06080 PF00529 HlyD membrane-fusion protein of T1SS SH02_RS06080 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SH02_RS06085 PF08361 MAATS-type transcriptional repressor, C-terminal region SH02_RS06085 PF00440 Bacterial regulatory proteins, tetR family SH02_RS06090 PF12795 Mechanosensitive ion channel porin domain SH02_RS06090 PF00924 Mechanosensitive ion channel SH02_RS06090 PF12794 Mechanosensitive ion channel inner membrane domain 1 SH02_RS06100 PF10689 Protein of unknown function (DUF2496) SH02_RS06105 PF07445 Primosomal replication protein priC SH02_RS06110 PF04304 Protein of unknown function (DUF454) SH02_RS06115 PF00156 Phosphoribosyl transferase domain SH02_RS06120 PF12170 DNA polymerase III tau subunit V interacting with alpha SH02_RS06120 PF12169 DNA polymerase III subunits gamma and tau domain III SH02_RS06120 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding SH02_RS06125 PF02575 YbaB/EbfC DNA-binding family SH02_RS06130 PF02132 RecR protein SH02_RS06130 PF13662 Toprim domain SH02_RS06135 PF00183 Hsp90 protein SH02_RS06135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SH02_RS06140 PF05191 Adenylate kinase, active site lid SH02_RS06145 PF00762 Ferrochelatase SH02_RS06150 PF07859 alpha/beta hydrolase fold SH02_RS06155 PF00294 pfkB family carbohydrate kinase SH02_RS06160 PF00999 Sodium/hydrogen exchanger family SH02_RS06160 PF02254 TrkA-N domain SH02_RS06165 PF07690 Major Facilitator Superfamily SH02_RS06170 PF02872 5'-nucleotidase, C-terminal domain SH02_RS06170 PF00149 Calcineurin-like phosphoesterase SH02_RS06175 PF04073 Aminoacyl-tRNA editing domain SH02_RS06180 PF01963 TraB family SH02_RS06185 PF01381 Helix-turn-helix SH02_RS06190 PF00403 Heavy-metal-associated domain SH02_RS06195 PF04960 Glutaminase SH02_RS06200 PF13520 Amino acid permease SH02_RS06205 PF13411 MerR HTH family regulatory protein SH02_RS06210 PF01957 NfeD-like C-terminal, partner-binding SH02_RS06215 PF16200 C-terminal region of band_7 SH02_RS06215 PF01145 SPFH domain / Band 7 family SH02_RS06220 PF00005 ABC transporter SH02_RS06225 PF03649 Uncharacterised protein family (UPF0014) SH02_RS06230 PF00085 Thioredoxin SH02_RS06235 PF00106 short chain dehydrogenase SH02_RS06240 PF13472 GDSL-like Lipase/Acylhydrolase family SH02_RS06245 PF00005 ABC transporter SH02_RS06255 PF05593 RHS Repeat SH02_RS06255 PF14220 Domain of unknown function (DUF4329) SH02_RS06255 PF03527 RHS protein SH02_RS06260 PF15631 NTF2 fold immunity protein SH02_RS06265 PF03527 RHS protein SH02_RS06285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS06285 PF03466 LysR substrate binding domain SH02_RS06290 PF04115 Ureidoglycolate lyase SH02_RS06295 PF01614 Bacterial transcriptional regulator SH02_RS06295 PF09339 IclR helix-turn-helix domain SH02_RS06300 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SH02_RS06300 PF00205 Thiamine pyrophosphate enzyme, central domain SH02_RS06300 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SH02_RS06305 PF01261 Xylose isomerase-like TIM barrel SH02_RS06310 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SH02_RS06310 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SH02_RS06315 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin SH02_RS06320 PF01979 Amidohydrolase family SH02_RS06325 PF00860 Permease family SH02_RS06330 PF02595 Glycerate kinase family SH02_RS06335 PF07883 Cupin domain SH02_RS06335 PF05899 Protein of unknown function (DUF861) SH02_RS06340 PF01546 Peptidase family M20/M25/M40 SH02_RS06345 PF02615 Malate/L-lactate dehydrogenase SH02_RS06350 PF00549 CoA-ligase SH02_RS06350 PF02629 CoA binding domain SH02_RS06355 PF06545 Protein of unknown function (DUF1116) SH02_RS06360 PF11392 Protein of unknown function (DUF2877) SH02_RS06365 PF00696 Amino acid kinase family SH02_RS06370 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain SH02_RS06370 PF02222 ATP-grasp domain SH02_RS06375 PF00731 AIR carboxylase SH02_RS06380 PF12850 Calcineurin-like phosphoesterase superfamily domain SH02_RS06385 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SH02_RS06390 PF01406 tRNA synthetases class I (C) catalytic domain SH02_RS06390 PF09190 DALR domain SH02_RS06395 PF04307 LexA-binding, inner membrane-associated putative hydrolase SH02_RS06405 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SH02_RS06405 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SH02_RS06410 PF00419 Fimbrial protein SH02_RS06415 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SH02_RS06415 PF02753 Pili assembly chaperone PapD, C-terminal domain SH02_RS06420 PF13954 PapC N-terminal domain SH02_RS06420 PF13953 PapC C-terminal domain SH02_RS06420 PF00577 Outer membrane usher protein SH02_RS06425 PF00419 Fimbrial protein SH02_RS06430 PF00419 Fimbrial protein SH02_RS06435 PF00196 Bacterial regulatory proteins, luxR family SH02_RS06435 PF00072 Response regulator receiver domain SH02_RS06445 PF00589 Phage integrase family SH02_RS06455 PF06992 Replication protein P SH02_RS06465 PF01527 Transposase SH02_RS06470 PF13333 Integrase core domain SH02_RS06470 PF13276 HTH-like domain SH02_RS06470 PF00665 Integrase core domain SH02_RS06480 PF00893 Small Multidrug Resistance protein SH02_RS06490 PF07508 Recombinase SH02_RS06490 PF00239 Resolvase, N terminal domain SH02_RS06490 PF13408 Recombinase zinc beta ribbon domain SH02_RS06495 PF01161 Phosphatidylethanolamine-binding protein SH02_RS06500 PF12833 Helix-turn-helix domain SH02_RS06515 PF07102 Protein of unknown function (DUF1364) SH02_RS06520 PF05866 Endodeoxyribonuclease RusA SH02_RS06530 PF06530 Phage antitermination protein Q SH02_RS06540 PF05598 Transposase domain (DUF772) SH02_RS06540 PF01609 Transposase DDE domain SH02_RS06545 PF07166 Protein of unknown function (DUF1398) SH02_RS06555 PF13132 Domain of unknown function (DUF3950) SH02_RS06570 PF03400 IS1 transposase SH02_RS06575 PF07471 Phage DNA packaging protein Nu1 SH02_RS06580 PF02413 Caudovirales tail fibre assembly protein, lambda gpK SH02_RS06585 PF08242 Methyltransferase domain SH02_RS06595 PF12833 Helix-turn-helix domain SH02_RS06600 PF01278 Omptin family SH02_RS06610 PF12833 Helix-turn-helix domain SH02_RS06615 PF14488 Domain of unknown function (DUF4434) SH02_RS06620 PF13283 Bacteriophage N adsorption protein A C-term SH02_RS06625 PF13632 Glycosyl transferase family group 2 SH02_RS06625 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain SH02_RS06630 PF00672 HAMP domain SH02_RS06630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SH02_RS06630 PF00512 His Kinase A (phospho-acceptor) domain SH02_RS06635 PF00486 Transcriptional regulatory protein, C terminal SH02_RS06635 PF00072 Response regulator receiver domain SH02_RS06640 PF02321 Outer membrane efflux protein SH02_RS06645 PF11604 Copper binding periplasmic protein CusF SH02_RS06650 PF00529 HlyD membrane-fusion protein of T1SS SH02_RS06650 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SH02_RS06655 PF00873 AcrB/AcrD/AcrF family SH02_RS06660 PF00324 Amino acid permease SH02_RS06665 PF00924 Mechanosensitive ion channel SH02_RS06670 PF00881 Nitroreductase family SH02_RS06675 PF04237 YjbR SH02_RS06680 PF06643 Protein of unknown function (DUF1158) SH02_RS06685 PF04107 Glutamate-cysteine ligase family 2(GCS2) SH02_RS06695 PF01848 Hok/gef family SH02_RS06700 PF01609 Transposase DDE domain SH02_RS06705 PF17837 4'-phosphopantetheinyl transferase N-terminal domain SH02_RS06705 PF01648 4'-phosphopantetheinyl transferase superfamily SH02_RS06710 PF07715 TonB-dependent Receptor Plug Domain SH02_RS06710 PF00593 TonB dependent receptor SH02_RS06715 PF11806 Domain of unknown function (DUF3327) SH02_RS06715 PF00756 Putative esterase SH02_RS06720 PF03621 MbtH-like protein SH02_RS06725 PF13193 AMP-binding enzyme C-terminal domain SH02_RS06725 PF00501 AMP-binding enzyme SH02_RS06725 PF00550 Phosphopantetheine attachment site SH02_RS06725 PF00975 Thioesterase domain SH02_RS06725 PF00668 Condensation domain SH02_RS06730 PF02706 Chain length determinant protein SH02_RS06735 PF00005 ABC transporter SH02_RS06740 PF01032 FecCD transport family SH02_RS06745 PF01032 FecCD transport family SH02_RS06750 PF05977 Transmembrane secretion effector SH02_RS06755 PF01497 Periplasmic binding protein SH02_RS06760 PF00425 chorismate binding enzyme SH02_RS06765 PF13193 AMP-binding enzyme C-terminal domain SH02_RS06765 PF00501 AMP-binding enzyme SH02_RS06770 PF00550 Phosphopantetheine attachment site SH02_RS06770 PF00857 Isochorismatase family SH02_RS06780 PF03061 Thioesterase superfamily SH02_RS06785 PF02554 Carbon starvation protein CstA SH02_RS06785 PF13722 5TM C-terminal transporter carbon starvation CstA SH02_RS06790 PF04328 Selenoprotein, putative SH02_RS06795 PF00465 Iron-containing alcohol dehydrogenase SH02_RS06800 PF00155 Aminotransferase class I and II SH02_RS06805 PF02195 ParB-like nuclease domain SH02_RS06810 PF01507 Phosphoadenosine phosphosulfate reductase family SH02_RS06810 PF11922 Domain of unknown function (DUF3440) SH02_RS06815 PF03466 LysR substrate binding domain SH02_RS06815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS06820 PF13098 Thioredoxin-like domain SH02_RS06825 PF10417 C-terminal domain of 1-Cys peroxiredoxin SH02_RS06825 PF00578 AhpC/TSA family SH02_RS06830 PF13192 Thioredoxin domain SH02_RS06830 PF07992 Pyridine nucleotide-disulphide oxidoreductase SH02_RS06835 PF00582 Universal stress protein family SH02_RS06840 PF08240 Alcohol dehydrogenase GroES-like domain SH02_RS06840 PF00107 Zinc-binding dehydrogenase SH02_RS06840 PF13823 Alcohol dehydrogenase GroES-associated SH02_RS06850 PF14760 Rnk N-terminus SH02_RS06850 PF01272 Transcription elongation factor, GreA/GreB, C-term SH02_RS06855 PF00445 Ribonuclease T2 family SH02_RS06860 PF00939 Sodium:sulfate symporter transmembrane region SH02_RS06865 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase SH02_RS06870 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase SH02_RS06875 PF04223 Citrate lyase, alpha subunit (CitF) SH02_RS06880 PF03328 HpcH/HpaI aldolase/citrate lyase family SH02_RS06885 PF06857 Malonate decarboxylase delta subunit (MdcD) SH02_RS06890 PF08218 Citrate lyase ligase C-terminal domain SH02_RS06895 PF00989 PAS fold SH02_RS06895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SH02_RS06895 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain SH02_RS06895 PF17203 Single cache domain 3 SH02_RS06900 PF12431 Transcriptional regulator SH02_RS06900 PF00072 Response regulator receiver domain SH02_RS06905 PF03606 C4-dicarboxylate anaerobic carrier SH02_RS06910 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP SH02_RS06915 PF00313 'Cold-shock' DNA-binding domain SH02_RS06920 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SH02_RS06930 PF02416 mttA/Hcf106 family SH02_RS06935 PF04055 Radical SAM superfamily SH02_RS06935 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family SH02_RS06940 PF03466 LysR substrate binding domain SH02_RS06940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS06950 PF03099 Biotin/lipoate A/B protein ligase family SH02_RS06955 PF04359 Protein of unknown function (DUF493) SH02_RS06960 PF00768 D-alanyl-D-alanine carboxypeptidase SH02_RS06960 PF07943 Penicillin-binding protein 5, C-terminal domain SH02_RS06965 PF03330 Lytic transglycolase SH02_RS06965 PF05036 Sporulation related domain SH02_RS06970 PF01098 Cell cycle protein SH02_RS06975 PF00905 Penicillin binding protein transpeptidase domain SH02_RS06975 PF03717 Penicillin-binding Protein dimerisation domain SH02_RS06980 PF02590 Predicted SPOUT methyltransferase SH02_RS06990 PF00300 Histidine phosphatase superfamily (branch 1) SH02_RS06995 PF01467 Cytidylyltransferase-like SH02_RS07000 PF06144 DNA polymerase III, delta subunit SH02_RS07000 PF14840 Processivity clamp loader gamma complex DNA pol III C-term SH02_RS07005 PF04390 Lipopolysaccharide-assembly SH02_RS07010 PF08264 Anticodon-binding domain of tRNA SH02_RS07010 PF13603 Leucyl-tRNA synthetase, Domain 2 SH02_RS07010 PF00133 tRNA synthetases class I (I, L, M and V) SH02_RS07015 PF07295 Zinc-ribbon containing domain SH02_RS07020 PF08238 Sel1 repeat SH02_RS07025 PF06889 Protein of unknown function (DUF1266) SH02_RS07035 PF08238 Sel1 repeat SH02_RS07040 PF06889 Protein of unknown function (DUF1266) SH02_RS07050 PF00012 Hsp70 protein SH02_RS07055 PF01156 Inosine-uridine preferring nucleoside hydrolase SH02_RS07060 PF00005 ABC transporter SH02_RS07065 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS07070 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS07075 PF00497 Bacterial extracellular solute-binding proteins, family 3 SH02_RS07080 PF01609 Transposase DDE domain SH02_RS07080 PF05598 Transposase domain (DUF772) SH02_RS07085 PF00795 Carbon-nitrogen hydrolase SH02_RS07090 PF03471 Transporter associated domain SH02_RS07090 PF00571 CBS domain SH02_RS07095 PF02130 Uncharacterized protein family UPF0054 SH02_RS07100 PF02562 PhoH-like protein SH02_RS07105 PF00919 Uncharacterized protein family UPF0004 SH02_RS07105 PF01938 TRAM domain SH02_RS07105 PF04055 Radical SAM superfamily SH02_RS07110 PF01494 FAD binding domain SH02_RS07150 PF13537 Glutamine amidotransferase domain SH02_RS07150 PF00733 Asparagine synthase SH02_RS07155 PF13344 Haloacid dehalogenase-like hydrolase SH02_RS07160 PF01047 MarR family SH02_RS07160 PF00480 ROK family SH02_RS07165 PF01979 Amidohydrolase family SH02_RS07170 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SH02_RS07175 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SH02_RS07175 PF02378 Phosphotransferase system, EIIC SH02_RS07175 PF00367 phosphotransferase system, EIIB SH02_RS07180 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain SH02_RS07180 PF00749 tRNA synthetases class I (E and Q), catalytic domain SH02_RS07185 PF03573 outer membrane porin, OprD family SH02_RS07190 PF13982 YbfN-like lipoprotein SH02_RS07195 PF01475 Ferric uptake regulator family SH02_RS07210 PF00258 Flavodoxin SH02_RS07215 PF01402 Ribbon-helix-helix protein, copG family SH02_RS07220 PF12697 Alpha/beta hydrolase family SH02_RS07225 PF03925 SeqA protein C-terminal domain SH02_RS07225 PF17206 SeqA protein N-terminal domain SH02_RS07230 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SH02_RS07230 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SH02_RS07230 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SH02_RS07230 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SH02_RS07250 PF13520 Amino acid permease SH02_RS07255 PF01276 Orn/Lys/Arg decarboxylase, major domain SH02_RS07255 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain SH02_RS07255 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SH02_RS07265 PF00486 Transcriptional regulatory protein, C terminal SH02_RS07265 PF00072 Response regulator receiver domain SH02_RS07270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SH02_RS07270 PF02702 Osmosensitive K+ channel His kinase sensor domain SH02_RS07270 PF13493 Domain of unknown function (DUF4118) SH02_RS07270 PF13492 GAF domain SH02_RS07270 PF00512 His Kinase A (phospho-acceptor) domain SH02_RS07275 PF02669 K+-transporting ATPase, c chain SH02_RS07285 PF03814 Potassium-transporting ATPase A subunit SH02_RS07290 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) SH02_RS07295 PF10725 Protein of unknown function (DUF2517) SH02_RS07300 PF05593 RHS Repeat SH02_RS07300 PF03527 RHS protein SH02_RS07310 PF05593 RHS Repeat SH02_RS07310 PF03527 RHS protein SH02_RS07320 PF13808 DDE_Tnp_1-associated SH02_RS07325 PF01609 Transposase DDE domain SH02_RS07325 PF13808 DDE_Tnp_1-associated SH02_RS07330 PF13808 DDE_Tnp_1-associated SH02_RS07330 PF01609 Transposase DDE domain SH02_RS07335 PF08349 Protein of unknown function (DUF1722) SH02_RS07340 PF03441 FAD binding domain of DNA photolyase SH02_RS07340 PF00875 DNA photolyase SH02_RS07345 PF00854 POT family SH02_RS07350 PF01784 NIF3 (NGG1p interacting factor 3) SH02_RS07355 PF02682 Carboxyltransferase domain, subdomain C and D SH02_RS07360 PF02626 Carboxyltransferase domain, subdomain A and B SH02_RS07365 PF03746 LamB/YcsF family SH02_RS07370 PF06827 Zinc finger found in FPG and IleRS SH02_RS07370 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SH02_RS07370 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SH02_RS07375 PF05145 Transition state regulatory protein AbrB SH02_RS07380 PF00419 Fimbrial protein SH02_RS07385 PF02753 Pili assembly chaperone PapD, C-terminal domain SH02_RS07385 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SH02_RS07390 PF13953 PapC C-terminal domain SH02_RS07390 PF13954 PapC N-terminal domain SH02_RS07390 PF00577 Outer membrane usher protein SH02_RS07395 PF00419 Fimbrial protein SH02_RS07400 PF00285 Citrate synthase, C-terminal domain SH02_RS07410 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit SH02_RS07415 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit SH02_RS07420 PF02910 Fumarate reductase flavoprotein C-term SH02_RS07420 PF00890 FAD binding domain SH02_RS07425 PF13085 2Fe-2S iron-sulfur cluster binding domain SH02_RS07435 PF02779 Transketolase, pyrimidine binding domain SH02_RS07435 PF16078 2-oxoglutarate dehydrogenase N-terminus SH02_RS07435 PF16870 2-oxoglutarate dehydrogenase C-terminal SH02_RS07435 PF00676 Dehydrogenase E1 component SH02_RS07440 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SH02_RS07440 PF02817 e3 binding domain SH02_RS07440 PF00364 Biotin-requiring enzyme SH02_RS07445 PF00549 CoA-ligase SH02_RS07445 PF08442 ATP-grasp domain SH02_RS07450 PF02629 CoA binding domain SH02_RS07450 PF00549 CoA-ligase SH02_RS07455 PF00392 Bacterial regulatory proteins, gntR family SH02_RS07455 PF07702 UTRA domain SH02_RS07460 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SH02_RS07460 PF02378 Phosphotransferase system, EIIC SH02_RS07460 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SH02_RS07465 PF01074 Glycosyl hydrolases family 38 N-terminal domain SH02_RS07465 PF07748 Glycosyl hydrolases family 38 C-terminal domain SH02_RS07465 PF09261 Alpha mannosidase middle domain SH02_RS07475 PF01654 Cytochrome bd terminal oxidase subunit I SH02_RS07480 PF02322 Cytochrome bd terminal oxidase subunit II SH02_RS07485 PF08173 Membrane bound YbgT-like protein SH02_RS07490 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) SH02_RS07495 PF03061 Thioesterase superfamily SH02_RS07500 PF01618 MotA/TolQ/ExbB proton channel family SH02_RS07505 PF02472 Biopolymer transport protein ExbD/TolR SH02_RS07510 PF06519 TolA C-terminal SH02_RS07515 PF04052 TolB amino-terminal domain SH02_RS07515 PF07676 WD40-like Beta Propeller Repeat SH02_RS07520 PF00691 OmpA family SH02_RS07525 PF16331 TolA binding protein trimerisation SH02_RS07525 PF13174 Tetratricopeptide repeat SH02_RS07565 PF02445 Quinolinate synthetase A protein SH02_RS07570 PF04973 Nicotinamide mononucleotide transporter SH02_RS07575 PF01545 Cation efflux family SH02_RS07580 PF13985 YbgS-like protein SH02_RS07590 PF00793 DAHP synthetase I family SH02_RS07595 PF00300 Histidine phosphatase superfamily (branch 1) SH02_RS07600 PF01263 Aldose 1-epimerase SH02_RS07605 PF08544 GHMP kinases C terminal SH02_RS07605 PF10509 Galactokinase galactose-binding signature SH02_RS07605 PF00288 GHMP kinases N terminal domain SH02_RS07610 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain SH02_RS07610 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain SH02_RS07615 PF16363 GDP-mannose 4,6 dehydratase SH02_RS07620 PF00005 ABC transporter SH02_RS07625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS07625 PF03459 TOBE domain SH02_RS07630 PF10766 Multidrug efflux pump-associated protein AcrZ SH02_RS07640 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS07645 PF03459 TOBE domain SH02_RS07645 PF00005 ABC transporter SH02_RS07655 PF10282 Lactonase, 7-bladed beta-propeller SH02_RS07660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS07660 PF03466 LysR substrate binding domain SH02_RS07665 PF04303 PrpF protein SH02_RS07670 PF00939 Sodium:sulfate symporter transmembrane region SH02_RS07675 PF00330 Aconitase family (aconitate hydratase) SH02_RS07675 PF00694 Aconitase C-terminal domain SH02_RS07680 PF01095 Pectinesterase SH02_RS07685 PF01161 Phosphatidylethanolamine-binding protein SH02_RS07690 PF00202 Aminotransferase class-III SH02_RS07695 PF04055 Radical SAM superfamily SH02_RS07695 PF06968 Biotin and Thiamin Synthesis associated domain SH02_RS07700 PF00155 Aminotransferase class I and II SH02_RS07705 PF08241 Methyltransferase domain SH02_RS07715 PF00271 Helicase conserved C-terminal domain SH02_RS07715 PF02151 UvrB/uvrC motif SH02_RS07715 PF12344 Ultra-violet resistance protein B SH02_RS07715 PF17757 UvrB interaction domain SH02_RS07715 PF04851 Type III restriction enzyme, res subunit SH02_RS07720 PF01933 Uncharacterised protein family UPF0052 SH02_RS07730 PF06463 Molybdenum Cofactor Synthesis C SH02_RS07730 PF04055 Radical SAM superfamily SH02_RS07735 PF00994 Probable molybdopterin binding domain SH02_RS07740 PF01967 MoaC family SH02_RS07745 PF02597 ThiS family SH02_RS07750 PF02391 MoaE protein SH02_RS07755 PF01027 Inhibitor of apoptosis-promoting Bax1 SH02_RS07760 PF01027 Inhibitor of apoptosis-promoting Bax1 SH02_RS07765 PF03706 Lysylphosphatidylglycerol synthase TM region SH02_RS07770 PF13091 PLD-like domain SH02_RS07775 PF03372 Endonuclease/Exonuclease/phosphatase family SH02_RS07780 PF11076 Putative inner membrane protein YbhQ SH02_RS07795 PF00005 ABC transporter SH02_RS07800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SH02_RS07805 PF00440 Bacterial regulatory proteins, tetR family SH02_RS07805 PF09209 Tetracyclin repressor-like, C-terminal domain SH02_RS07810 PF00271 Helicase conserved C-terminal domain SH02_RS07810 PF00270 DEAD/DEAH box helicase SH02_RS07815 PF08719 Domain of unknown function (DUF1768) SH02_RS07820 PF13307 Helicase C-terminal domain SH02_RS07820 PF00270 DEAD/DEAH box helicase SH02_RS07820 PF06733 DEAD_2 SH02_RS07825 PF02885 Glycosyl transferase family, helical bundle domain SH02_RS07830 PF02615 Malate/L-lactate dehydrogenase SH02_RS07835 PF07338 Protein of unknown function (DUF1471) SH02_RS07840 PF01258 Prokaryotic dksA/traR C4-type zinc finger SH02_RS07845 PF18331 PKHD-type hydroxylase C-terminal domain SH02_RS07845 PF13640 2OG-Fe(II) oxygenase superfamily SH02_RS07850 PF00593 TonB dependent receptor SH02_RS07850 PF07715 TonB-dependent Receptor Plug Domain SH02_RS07855 PF07338 Protein of unknown function (DUF1471) SH02_RS07860 PF05971 RNA methyltransferase SH02_RS07865 PF00924 Mechanosensitive ion channel SH02_RS07870 PF00005 ABC transporter SH02_RS07875 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS07880 PF00497 Bacterial extracellular solute-binding proteins, family 3 SH02_RS07890 PF00210 Ferritin-like domain SH02_RS07895 PF00892 EamA-like transporter family SH02_RS07900 PF13505 Outer membrane protein beta-barrel domain SH02_RS07905 PF00884 Sulfatase SH02_RS07915 PF01325 Iron dependent repressor, N-terminal DNA binding domain SH02_RS07915 PF02742 Iron dependent repressor, metal binding and dimerisation domain SH02_RS07920 PF03600 Citrate transporter SH02_RS07925 PF03734 L,D-transpeptidase catalytic domain SH02_RS07925 PF17969 L,D-transpeptidase C-terminal domain SH02_RS07930 PF00005 ABC transporter SH02_RS07930 PF12848 ABC transporter SH02_RS07935 PF07350 Protein of unknown function (DUF1479) SH02_RS07945 PF02901 Pyruvate formate lyase-like SH02_RS07945 PF01228 Glycine radical SH02_RS07950 PF04055 Radical SAM superfamily SH02_RS07955 PF00923 Transaldolase/Fructose-6-phosphate aldolase SH02_RS07960 PF00899 ThiF family SH02_RS07965 PF03454 MoeA C-terminal region (domain IV) SH02_RS07965 PF03453 MoeA N-terminal region (domain I and II) SH02_RS07965 PF00994 Probable molybdopterin binding domain SH02_RS07970 PF01112 Asparaginase SH02_RS07975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SH02_RS07975 PF00005 ABC transporter SH02_RS07980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SH02_RS07985 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS07990 PF12911 N-terminal TM domain of oligopeptide transport permease C SH02_RS07990 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS08000 PF00990 Diguanylate cyclase, GGDEF domain SH02_RS08000 PF17156 Gammaproteobacterial periplasmic sensor domain SH02_RS08005 PF18693 TRAM domain SH02_RS08005 PF04055 Radical SAM superfamily SH02_RS08005 PF00919 Uncharacterized protein family UPF0004 SH02_RS08010 PF10799 Biofilm formation protein (YliH/bssR) SH02_RS08015 PF07995 Glucose / Sorbosone dehydrogenase SH02_RS08020 PF13417 Glutathione S-transferase, N-terminal domain SH02_RS08020 PF00043 Glutathione S-transferase, C-terminal domain SH02_RS08025 PF00768 D-alanyl-D-alanine carboxypeptidase SH02_RS08025 PF07943 Penicillin-binding protein 5, C-terminal domain SH02_RS08030 PF08220 DeoR-like helix-turn-helix domain SH02_RS08030 PF00455 DeoR C terminal sensor domain SH02_RS08035 PF01569 PAP2 superfamily SH02_RS08040 PF07690 Major Facilitator Superfamily SH02_RS08055 PF07690 Major Facilitator Superfamily SH02_RS08060 PF00440 Bacterial regulatory proteins, tetR family SH02_RS08065 PF02080 TrkA-C domain SH02_RS08065 PF06826 Predicted Permease Membrane Region SH02_RS08070 PF11045 Putative inner membrane protein of Enterobacteriaceae SH02_RS08075 PF00462 Glutaredoxin SH02_RS08080 PF07214 Protein of unknown function (DUF1418) SH02_RS08085 PF00881 Nitroreductase family SH02_RS08090 PF18030 RimK PreATP-grasp domain SH02_RS08090 PF08443 RimK-like ATP-grasp domain SH02_RS08095 PF10722 Putative bacterial sensory transduction regulator SH02_RS08105 PF13416 Bacterial extracellular solute-binding protein SH02_RS08110 PF08402 TOBE domain SH02_RS08110 PF00005 ABC transporter SH02_RS08115 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS08120 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS08125 PF10767 Protein of unknown function (DUF2593) SH02_RS08130 PF05958 tRNA (Uracil-5-)-methyltransferase SH02_RS08135 PF00497 Bacterial extracellular solute-binding proteins, family 3 SH02_RS08140 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS08145 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS08150 PF00497 Bacterial extracellular solute-binding proteins, family 3 SH02_RS08155 PF00005 ABC transporter SH02_RS08160 PF12883 Protein of unknown function (DUF3828) SH02_RS08165 PF01906 Putative heavy-metal-binding SH02_RS08170 PF01510 N-acetylmuramoyl-L-alanine amidase SH02_RS08175 PF01370 NAD dependent epimerase/dehydratase family SH02_RS08180 PF13460 NAD(P)H-binding SH02_RS08180 PF11066 Protein of unknown function (DUF2867) SH02_RS08185 PF01212 Beta-eliminating lyase SH02_RS08190 PF00205 Thiamine pyrophosphate enzyme, central domain SH02_RS08190 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SH02_RS08190 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SH02_RS08195 PF00111 2Fe-2S iron-sulfur cluster binding domain SH02_RS08195 PF00970 Oxidoreductase FAD-binding domain SH02_RS08195 PF00175 Oxidoreductase NAD-binding domain SH02_RS08200 PF03063 Prismane/CO dehydrogenase family SH02_RS08205 PF03956 Lysine exporter LysO SH02_RS08210 PF00230 Major intrinsic protein SH02_RS08220 PF11398 Protein of unknown function (DUF2813) SH02_RS08225 PF04393 Protein of unknown function (DUF535) SH02_RS08230 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SH02_RS08235 PF12704 MacB-like periplasmic core domain SH02_RS08235 PF02687 FtsX-like permease family SH02_RS08235 PF00005 ABC transporter SH02_RS08240 PF00313 'Cold-shock' DNA-binding domain SH02_RS08245 PF02617 ATP-dependent Clp protease adaptor protein ClpS SH02_RS08250 PF17871 AAA lid domain SH02_RS08250 PF07724 AAA domain (Cdc48 subfamily) SH02_RS08250 PF10431 C-terminal, D2-small domain, of ClpB protein SH02_RS08250 PF00004 ATPase family associated with various cellular activities (AAA) SH02_RS08250 PF02861 Clp amino terminal domain, pathogenicity island component SH02_RS08260 PF01176 Translation initiation factor 1A / IF-1 SH02_RS08265 PF03588 Leucyl/phenylalanyl-tRNA protein transferase SH02_RS08270 PF00664 ABC transporter transmembrane region SH02_RS08270 PF00005 ABC transporter SH02_RS08275 PF00005 ABC transporter SH02_RS08275 PF00664 ABC transporter transmembrane region SH02_RS08280 PF07992 Pyridine nucleotide-disulphide oxidoreductase SH02_RS08285 PF01037 Lrp/AsnC ligand binding domain SH02_RS08290 PF13491 4TM region of DNA translocase FtsK/SpoIIIE SH02_RS08290 PF01580 FtsK/SpoIIIE family SH02_RS08290 PF09397 Ftsk gamma domain SH02_RS08290 PF17854 FtsK alpha domain SH02_RS08295 PF03548 Outer membrane lipoprotein carrier protein LolA SH02_RS08300 PF16193 AAA C-terminal domain SH02_RS08300 PF12002 MgsA AAA+ ATPase C terminal SH02_RS08300 PF00004 ATPase family associated with various cellular activities (AAA) SH02_RS08305 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SH02_RS08305 PF02403 Seryl-tRNA synthetase N-terminal domain SH02_RS08310 PF00384 Molybdopterin oxidoreductase SH02_RS08310 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SH02_RS08310 PF01568 Molydopterin dinucleotide binding domain SH02_RS08315 PF12800 4Fe-4S binding domain SH02_RS08315 PF13247 4Fe-4S dicluster domain SH02_RS08320 PF04976 DMSO reductase anchor subunit (DmsC) SH02_RS08325 PF00857 Isochorismatase family SH02_RS08330 PF07690 Major Facilitator Superfamily SH02_RS08335 PF13520 Amino acid permease SH02_RS08340 PF03466 LysR substrate binding domain SH02_RS08340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS08345 PF02525 Flavodoxin-like fold SH02_RS08350 PF04055 Radical SAM superfamily SH02_RS08355 PF02901 Pyruvate formate lyase-like SH02_RS08355 PF01228 Glycine radical SH02_RS08360 PF01226 Formate/nitrite transporter SH02_RS08365 PF18381 YcaO cyclodehydratase C-terminal domain SH02_RS08365 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding SH02_RS08370 PF04239 Protein of unknown function (DUF421) SH02_RS08375 PF00266 Aminotransferase class-V SH02_RS08380 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SH02_RS08385 PF01435 Peptidase family M48 SH02_RS08390 PF02224 Cytidylate kinase SH02_RS08395 PF00575 S1 RNA binding domain SH02_RS08400 PF00216 Bacterial DNA-binding protein SH02_RS08405 PF00753 Metallo-beta-lactamase superfamily SH02_RS08405 PF03772 Competence protein SH02_RS08410 PF00664 ABC transporter transmembrane region SH02_RS08410 PF00005 ABC transporter SH02_RS08415 PF02606 Tetraacyldisaccharide-1-P 4'-kinase SH02_RS08420 PF06224 Winged helix DNA-binding domain SH02_RS08425 PF03966 Trm112p-like protein SH02_RS08430 PF02348 Cytidylyltransferase SH02_RS08435 PF01636 Phosphotransferase enzyme family SH02_RS08440 PF02698 DUF218 domain SH02_RS08445 PF13847 Methyltransferase domain SH02_RS08450 PF17192 MukF middle domain SH02_RS08450 PF17193 MukF C-terminal domain SH02_RS08450 PF03882 MukF winged-helix domain SH02_RS08455 PF04288 MukE-like family SH02_RS08460 PF16330 MukB hinge domain SH02_RS08460 PF04310 MukB N-terminal SH02_RS08465 PF01471 Putative peptidoglycan binding domain SH02_RS08465 PF03734 L,D-transpeptidase catalytic domain SH02_RS08470 PF05951 Bacterial protein of unknown function (DUF882) SH02_RS08475 PF00753 Metallo-beta-lactamase superfamily SH02_RS08480 PF00155 Aminotransferase class I and II SH02_RS08490 PF00267 Gram-negative porin SH02_RS08495 PF00152 tRNA synthetases class II (D, K and N) SH02_RS08495 PF01336 OB-fold nucleic acid binding domain SH02_RS08500 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain SH02_RS08500 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family SH02_RS08505 PF01433 Peptidase family M1 domain SH02_RS08505 PF11940 Domain of unknown function (DUF3458) Ig-like fold SH02_RS08505 PF17432 Domain of unknown function (DUF3458_C) ARM repeats SH02_RS08510 PF00005 ABC transporter SH02_RS08515 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS08520 PF00296 Luciferase-like monooxygenase SH02_RS08525 PF09084 NMT1/THI5 like SH02_RS08530 PF03358 NADPH-dependent FMN reductase SH02_RS08535 PF00419 Fimbrial protein SH02_RS08540 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SH02_RS08540 PF02753 Pili assembly chaperone PapD, C-terminal domain SH02_RS08545 PF13953 PapC C-terminal domain SH02_RS08545 PF13954 PapC N-terminal domain SH02_RS08545 PF00577 Outer membrane usher protein SH02_RS08550 PF00419 Fimbrial protein SH02_RS08555 PF00419 Fimbrial protein SH02_RS08560 PF00419 Fimbrial protein SH02_RS08565 PF02753 Pili assembly chaperone PapD, C-terminal domain SH02_RS08565 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SH02_RS08570 PF01180 Dihydroorotate dehydrogenase SH02_RS08575 PF07126 Cell-division protein ZapC SH02_RS08580 PF00111 2Fe-2S iron-sulfur cluster binding domain SH02_RS08580 PF03476 MOSC N-terminal beta barrel domain SH02_RS08580 PF03473 MOSC domain SH02_RS08585 PF02926 THUMP domain SH02_RS08585 PF01170 Putative RNA methylase family UPF0020 SH02_RS08585 PF10672 S-adenosylmethionine-dependent methyltransferase SH02_RS08590 PF00005 ABC transporter SH02_RS08590 PF12848 ABC transporter SH02_RS08590 PF16326 ABC transporter C-terminal domain SH02_RS08595 PF04403 Paraquat-inducible protein A SH02_RS08600 PF02470 MlaD protein SH02_RS08605 PF03886 ABC-type transport auxiliary lipoprotein component SH02_RS08610 PF04957 Ribosome modulation factor SH02_RS08615 PF07977 FabA-like domain SH02_RS08620 PF05362 Lon protease (S16) C-terminal proteolytic domain SH02_RS08620 PF13654 AAA domain SH02_RS08625 PF17414 MatP C-terminal ribbon-helix-helix domain SH02_RS08625 PF06303 MatP N-terminal domain SH02_RS08630 PF00691 OmpA family SH02_RS08630 PF01389 OmpA-like transmembrane domain SH02_RS08640 PF03846 Cell division inhibitor SulA SH02_RS08645 PF04993 TfoX N-terminal domain SH02_RS08645 PF04994 TfoX C-terminal domain SH02_RS08650 PF12805 FUSC-like inner membrane protein yccS SH02_RS08655 PF03733 Inner membrane component domain SH02_RS08660 PF00580 UvrD/REP helicase N-terminal domain SH02_RS08660 PF13361 UvrD-like helicase C-terminal domain SH02_RS08660 PF12462 DNA helicase IV / RNA helicase N terminal SH02_RS08665 PF02142 MGS-like domain SH02_RS08670 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) SH02_RS08680 PF13380 CoA binding domain SH02_RS08685 PF08755 Hemimethylated DNA-binding protein YccV like SH02_RS08690 PF17785 PUA-like domain SH02_RS08690 PF10672 S-adenosylmethionine-dependent methyltransferase SH02_RS08695 PF00708 Acylphosphatase SH02_RS08700 PF04358 DsrC like protein SH02_RS08705 PF01027 Inhibitor of apoptosis-promoting Bax1 SH02_RS08715 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SH02_RS08715 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal SH02_RS08720 PF00374 Nickel-dependent hydrogenase SH02_RS08725 PF01292 Prokaryotic cytochrome b561 SH02_RS08730 PF01750 Hydrogenase maturation protease SH02_RS08735 PF07449 Hydrogenase-1 expression protein HyaE SH02_RS08740 PF04809 HupH hydrogenase expression protein, C-terminal conserved region SH02_RS08745 PF01654 Cytochrome bd terminal oxidase subunit I SH02_RS08750 PF02322 Cytochrome bd terminal oxidase subunit II SH02_RS08755 PF08173 Membrane bound YbgT-like protein SH02_RS08760 PF00328 Histidine phosphatase superfamily (branch 2) SH02_RS08765 PF02706 Chain length determinant protein SH02_RS08765 PF13807 G-rich domain on putative tyrosine kinase SH02_RS08765 PF13614 AAA domain SH02_RS08770 PF01451 Low molecular weight phosphotyrosine protein phosphatase SH02_RS08775 PF10531 SLBB domain SH02_RS08775 PF02563 Polysaccharide biosynthesis/export protein SH02_RS08775 PF18412 Outer-membrane lipoprotein Wza C-terminal domain SH02_RS08780 PF06082 Exopolysaccharide biosynthesis protein YbjH SH02_RS08785 PF06251 Capsule biosynthesis GfcC SH02_RS08790 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF SH02_RS08805 PF03400 IS1 transposase SH02_RS08810 PF00313 'Cold-shock' DNA-binding domain SH02_RS08815 PF00313 'Cold-shock' DNA-binding domain SH02_RS08820 PF15939 Putative antitoxin of bacterial toxin-antitoxin system SH02_RS08825 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system SH02_RS08830 PF12801 4Fe-4S binding domain SH02_RS08835 PF00072 Response regulator receiver domain SH02_RS08835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SH02_RS08835 PF00512 His Kinase A (phospho-acceptor) domain SH02_RS08835 PF01627 Hpt domain SH02_RS08835 PF00672 HAMP domain SH02_RS08840 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SH02_RS08845 PF00486 Transcriptional regulatory protein, C terminal SH02_RS08845 PF00072 Response regulator receiver domain SH02_RS08850 PF03264 NapC/NirT cytochrome c family, N-terminal region SH02_RS08855 PF00384 Molybdopterin oxidoreductase SH02_RS08855 PF01568 Molydopterin dinucleotide binding domain SH02_RS08855 PF18364 Molybdopterin oxidoreductase N-terminal domain SH02_RS08860 PF02613 Nitrate reductase delta subunit SH02_RS08870 PF01556 DnaJ C terminal domain SH02_RS08870 PF00226 DnaJ domain SH02_RS08880 PF00328 Histidine phosphatase superfamily (branch 2) SH02_RS08885 PF13993 YccJ-like protein SH02_RS08890 PF03358 NADPH-dependent FMN reductase SH02_RS08900 PF10685 Stress-induced bacterial acidophilic repeat motif SH02_RS08905 PF00860 Permease family SH02_RS08910 PF01613 Flavin reductase like domain SH02_RS08915 PF00881 Nitroreductase family SH02_RS08920 PF12697 Alpha/beta hydrolase family SH02_RS08925 PF01042 Endoribonuclease L-PSP SH02_RS08930 PF00857 Isochorismatase family SH02_RS08935 PF00296 Luciferase-like monooxygenase SH02_RS08940 PF08362 YcdC-like protein, C-terminal region SH02_RS08940 PF00440 Bacterial regulatory proteins, tetR family SH02_RS08945 PF18327 Proline utilization A proline dehydrogenase N-terminal domain SH02_RS08945 PF01619 Proline dehydrogenase SH02_RS08945 PF14850 DNA-binding domain of Proline dehydrogenase SH02_RS08945 PF00171 Aldehyde dehydrogenase family SH02_RS08955 PF00474 Sodium:solute symporter family SH02_RS08970 PF13473 Cupredoxin-like domain SH02_RS08970 PF09375 Imelysin SH02_RS08975 PF04261 Dyp-type peroxidase family SH02_RS08985 PF02562 PhoH-like protein SH02_RS08990 PF13994 PgaD-like protein SH02_RS08995 PF00535 Glycosyl transferase family 2 SH02_RS09000 PF01522 Polysaccharide deacetylase SH02_RS09000 PF14883 Hypothetical glycosyl hydrolase family 13 SH02_RS09010 PF00990 Diguanylate cyclase, GGDEF domain SH02_RS09010 PF17158 Membrane-associated sensor, integral membrane domain SH02_RS09015 PF13276 HTH-like domain SH02_RS09015 PF13333 Integrase core domain SH02_RS09015 PF00665 Integrase core domain SH02_RS09020 PF01527 Transposase SH02_RS09045 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SH02_RS09050 PF02811 PHP domain SH02_RS09055 PF02613 Nitrate reductase delta subunit SH02_RS09060 PF06496 Protein of unknown function (DUF1097) SH02_RS09065 PF03783 Curli production assembly/transport component CsgG SH02_RS09070 PF10614 Type VIII secretion system (T8SS), CsgF protein SH02_RS09075 PF10627 Curli assembly protein CsgE SH02_RS09080 PF00196 Bacterial regulatory proteins, luxR family SH02_RS09090 PF07012 Curlin associated repeat SH02_RS09095 PF07012 Curlin associated repeat SH02_RS09100 PF10610 Thin aggregative fimbriae synthesis protein SH02_RS09110 PF01661 Macro domain SH02_RS09115 PF13091 PLD-like domain SH02_RS09120 PF01757 Acyltransferase family SH02_RS09135 PF04349 Periplasmic glucan biosynthesis protein, MdoG SH02_RS09140 PF00535 Glycosyl transferase family 2 SH02_RS09145 PF07119 Protein of unknown function (DUF1375) SH02_RS09150 PF13984 MsyB protein SH02_RS09160 PF07690 Major Facilitator Superfamily SH02_RS09165 PF03279 Bacterial lipid A biosynthesis acyltransferase SH02_RS09170 PF12368 Rhodanase C-terminal SH02_RS09170 PF00581 Rhodanese-like domain SH02_RS09170 PF17773 UPF0176 acylphosphatase like domain SH02_RS09175 PF04264 YceI-like domain SH02_RS09180 PF01292 Prokaryotic cytochrome b561 SH02_RS09185 PF10968 Protein of unknown function (DUF2770) SH02_RS09190 PF01266 FAD dependent oxidoreductase SH02_RS09195 PF13991 BssS protein family SH02_RS09200 PF06183 DinI-like family SH02_RS09205 PF01979 Amidohydrolase family SH02_RS09210 PF07273 Protein of unknown function (DUF1439) SH02_RS09215 PF04399 Glutaredoxin 2, C terminal domain SH02_RS09215 PF13417 Glutathione S-transferase, N-terminal domain SH02_RS09220 PF07690 Major Facilitator Superfamily SH02_RS09225 PF13302 Acetyltransferase (GNAT) domain SH02_RS09230 PF04337 Protein of unknown function, DUF480 SH02_RS09235 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SH02_RS09240 PF03023 Lipid II flippase MurJ SH02_RS09245 PF05130 FlgN protein SH02_RS09250 PF04316 Anti-sigma-28 factor, FlgM SH02_RS09255 PF13144 Chaperone for flagella basal body P-ring formation SH02_RS09260 PF00460 Flagella basal body rod protein SH02_RS09265 PF00460 Flagella basal body rod protein SH02_RS09265 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SH02_RS09270 PF13861 FlgD Tudor-like domain SH02_RS09270 PF03963 Flagellar hook capping protein - N-terminal region SH02_RS09270 PF13860 FlgD Ig-like domain SH02_RS09275 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SH02_RS09275 PF00460 Flagella basal body rod protein SH02_RS09275 PF07559 Flagellar basal body protein FlaE SH02_RS09280 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SH02_RS09280 PF00460 Flagella basal body rod protein SH02_RS09285 PF00460 Flagella basal body rod protein SH02_RS09285 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SH02_RS09290 PF02107 Flagellar L-ring protein SH02_RS09295 PF02119 Flagellar P-ring protein SH02_RS09300 PF10135 Rod binding protein SH02_RS09300 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SH02_RS09305 PF00460 Flagella basal body rod protein SH02_RS09305 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SH02_RS09310 PF00669 Bacterial flagellin N-terminal helical region SH02_RS09315 PF12111 Polyribonucleotide phosphorylase C terminal SH02_RS09315 PF00575 S1 RNA binding domain SH02_RS09315 PF10150 Ribonuclease E/G family SH02_RS09325 PF00849 RNA pseudouridylate synthase SH02_RS09325 PF01479 S4 domain SH02_RS09330 PF02545 Maf-like protein SH02_RS09335 PF02620 Large ribosomal RNA subunit accumulation protein YceD SH02_RS09340 PF01783 Ribosomal L32p protein family SH02_RS09345 PF02504 Fatty acid synthesis protein SH02_RS09350 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SH02_RS09350 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SH02_RS09355 PF00698 Acyl transferase domain SH02_RS09365 PF00550 Phosphopantetheine attachment site SH02_RS09370 PF00109 Beta-ketoacyl synthase, N-terminal domain SH02_RS09370 PF02801 Beta-ketoacyl synthase, C-terminal domain SH02_RS09375 PF01063 Amino-transferase class IV SH02_RS09380 PF02618 YceG-like family SH02_RS09385 PF02223 Thymidylate kinase SH02_RS09390 PF09115 DNA polymerase III, delta subunit, C terminal SH02_RS09395 PF01026 TatD related DNase SH02_RS09400 PF02378 Phosphotransferase system, EIIC SH02_RS09400 PF00367 phosphotransferase system, EIIB SH02_RS09405 PF07715 TonB-dependent Receptor Plug Domain SH02_RS09405 PF00593 TonB dependent receptor SH02_RS09410 PF01230 HIT domain SH02_RS09415 PF07233 Protein of unknown function (DUF1425) SH02_RS09420 PF13036 Peptidoglycan-synthase activator LpoB SH02_RS09425 PF01636 Phosphotransferase enzyme family SH02_RS09430 PF00933 Glycosyl hydrolase family 3 N terminal domain SH02_RS09435 PF05728 Uncharacterised protein family (UPF0227) SH02_RS09440 PF07992 Pyridine nucleotide-disulphide oxidoreductase SH02_RS09445 PF05433 Glycine zipper 2TM domain SH02_RS09450 PF00440 Bacterial regulatory proteins, tetR family SH02_RS09455 PF07338 Protein of unknown function (DUF1471) SH02_RS09460 PF03734 L,D-transpeptidase catalytic domain SH02_RS09460 PF01476 LysM domain SH02_RS09460 PF17969 L,D-transpeptidase C-terminal domain SH02_RS09465 PF00271 Helicase conserved C-terminal domain SH02_RS09465 PF03461 TRCF domain SH02_RS09465 PF17757 UvrB interaction domain SH02_RS09465 PF00270 DEAD/DEAH box helicase SH02_RS09465 PF02559 CarD-like/TRCF domain SH02_RS09470 PF01757 Acyltransferase family SH02_RS09475 PF02687 FtsX-like permease family SH02_RS09475 PF12704 MacB-like periplasmic core domain SH02_RS09480 PF00005 ABC transporter SH02_RS09485 PF02687 FtsX-like permease family SH02_RS09485 PF12704 MacB-like periplasmic core domain SH02_RS09490 PF00480 ROK family SH02_RS09495 PF02146 Sir2 family SH02_RS09500 PF04536 TPM domain SH02_RS09505 PF12158 Protein of unknown function (DUF3592) SH02_RS09510 PF13416 Bacterial extracellular solute-binding protein SH02_RS09515 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS09520 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS09525 PF00005 ABC transporter SH02_RS09525 PF08402 TOBE domain SH02_RS09535 PF07687 Peptidase dimerisation domain SH02_RS09535 PF01546 Peptidase family M20/M25/M40 SH02_RS09540 PF08007 Cupin superfamily protein SH02_RS09545 PF08918 PhoQ Sensor SH02_RS09545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SH02_RS09550 PF00072 Response regulator receiver domain SH02_RS09550 PF00486 Transcriptional regulatory protein, C terminal SH02_RS09555 PF00206 Lyase SH02_RS09555 PF08328 Adenylosuccinate lyase C-terminal SH02_RS09560 PF04356 Protein of unknown function (DUF489) SH02_RS09570 PF00293 NUDIX domain SH02_RS09575 PF00849 RNA pseudouridylate synthase SH02_RS09580 PF00180 Isocitrate/isopropylmalate dehydrogenase SH02_RS09585 PF08242 Methyltransferase domain SH02_RS09595 PF10463 Peptidase U49 SH02_RS09600 PF00589 Phage integrase family SH02_RS09600 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain SH02_RS09605 PF07825 Excisionase-like protein SH02_RS09615 PF00717 Peptidase S24-like SH02_RS09620 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT SH02_RS09635 PF03354 Phage Terminase SH02_RS09645 PF04860 Phage portal protein SH02_RS09650 PF04865 Baseplate J-like protein SH02_RS09655 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) SH02_RS09660 PF07484 Phage Tail Collar Domain SH02_RS09665 PF02413 Caudovirales tail fibre assembly protein, lambda gpK SH02_RS09670 PF02413 Caudovirales tail fibre assembly protein, lambda gpK SH02_RS09680 PF02796 Helix-turn-helix domain of resolvase SH02_RS09680 PF00239 Resolvase, N terminal domain SH02_RS09685 PF01844 HNH endonuclease SH02_RS09700 PF07166 Protein of unknown function (DUF1398) SH02_RS09705 PF13411 MerR HTH family regulatory protein SH02_RS09710 PF00563 EAL domain SH02_RS09710 PF04940 Sensors of blue-light using FAD SH02_RS09715 PF10798 Biofilm development protein YmgB/AriR SH02_RS09725 PF10798 Biofilm development protein YmgB/AriR SH02_RS09735 PF12792 CSS motif domain associated with EAL SH02_RS09735 PF00563 EAL domain SH02_RS09760 PF16456 YmgD protein SH02_RS09765 PF13436 Glycine-zipper domain SH02_RS09780 PF03776 Septum formation topological specificity factor MinE SH02_RS09785 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SH02_RS09790 PF05209 Septum formation inhibitor MinC, N-terminal domain SH02_RS09790 PF03775 Septum formation inhibitor MinC, C-terminal domain SH02_RS09795 PF05666 Fels-1 Prophage Protein-like SH02_RS09800 PF04151 Bacterial pre-peptidase C-terminal domain SH02_RS09810 PF05166 YcgL domain SH02_RS09815 PF01557 Fumarylacetoacetate (FAA) hydrolase family SH02_RS09820 PF03692 Putative zinc- or iron-chelating domain SH02_RS09825 PF06109 Haemolysin E (HlyE) SH02_RS09830 PF00717 Peptidase S24-like SH02_RS09835 PF11798 IMS family HHH motif SH02_RS09835 PF11799 impB/mucB/samB family C-terminal domain SH02_RS09835 PF13438 Domain of unknown function (DUF4113) SH02_RS09835 PF00817 impB/mucB/samB family SH02_RS09840 PF02600 Disulfide bond formation protein DsbB SH02_RS09845 PF06450 Bacterial Na+/H+ antiporter B (NhaB) SH02_RS09850 PF00392 Bacterial regulatory proteins, gntR family SH02_RS09850 PF07840 FadR C-terminal domain SH02_RS09855 PF04293 SpoVR like protein SH02_RS09860 PF01266 FAD dependent oxidoreductase SH02_RS09865 PF00842 Alanine racemase, C-terminal domain SH02_RS09865 PF01168 Alanine racemase, N-terminal domain SH02_RS09870 PF02080 TrkA-C domain SH02_RS09870 PF00999 Sodium/hydrogen exchanger family SH02_RS09870 PF03471 Transporter associated domain SH02_RS09875 PF17676 LD-carboxypeptidase C-terminal domain SH02_RS09875 PF02016 LD-carboxypeptidase N-terminal domain SH02_RS09880 PF01464 Transglycosylase SLT domain SH02_RS09885 PF07317 Flagellar regulator YcgR SH02_RS09885 PF07238 PilZ domain SH02_RS09890 PF04226 Transglycosylase associated protein SH02_RS09900 PF01204 Trehalase SH02_RS09905 PF05524 PEP-utilising enzyme, N-terminal SH02_RS09905 PF03610 PTS system fructose IIA component SH02_RS09905 PF00391 PEP-utilising enzyme, mobile domain SH02_RS09905 PF00381 PTS HPr component phosphorylation site SH02_RS09910 PF02734 DAK2 domain SH02_RS09915 PF02733 Dak1 domain SH02_RS09920 PF00989 PAS fold SH02_RS09920 PF02954 Bacterial regulatory protein, Fis family SH02_RS09920 PF00158 Sigma-54 interaction domain SH02_RS09925 PF03212 Pertactin SH02_RS09925 PF03797 Autotransporter beta-domain SH02_RS09935 PF06071 Protein of unknown function (DUF933) SH02_RS09935 PF01926 50S ribosome-binding GTPase SH02_RS09940 PF01195 Peptidyl-tRNA hydrolase SH02_RS09945 PF10762 Protein of unknown function (DUF2583) SH02_RS09950 PF00916 Sulfate permease family SH02_RS09950 PF01740 STAS domain SH02_RS09955 PF14572 Phosphoribosyl synthetase-associated domain SH02_RS09955 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SH02_RS09960 PF08544 GHMP kinases C terminal SH02_RS09960 PF00288 GHMP kinases N terminal domain SH02_RS09965 PF03550 Outer membrane lipoprotein LolB SH02_RS09970 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain SH02_RS09970 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain SH02_RS09970 PF01488 Shikimate / quinate 5-dehydrogenase SH02_RS09975 PF03462 PCRF domain SH02_RS09975 PF00472 RF-1 domain SH02_RS09980 PF17827 PrmC N-terminal domain SH02_RS09980 PF13847 Methyltransferase domain SH02_RS09985 PF04247 Invasion gene expression up-regulator, SirB SH02_RS09990 PF13369 Transglutaminase-like superfamily SH02_RS09995 PF00793 DAHP synthetase I family SH02_RS10000 PF13940 Toxin Ldr, type I toxin-antitoxin system SH02_RS10005 PF13940 Toxin Ldr, type I toxin-antitoxin system SH02_RS10010 PF13940 Toxin Ldr, type I toxin-antitoxin system SH02_RS10015 PF01699 Sodium/calcium exchanger protein SH02_RS10020 PF06150 ChaB SH02_RS10025 PF04752 ChaC-like protein SH02_RS10030 PF02635 DsrE/DsrF-like family SH02_RS10035 PF11924 Inverse autotransporter, beta-domain SH02_RS10040 PF00072 Response regulator receiver domain SH02_RS10040 PF00196 Bacterial regulatory proteins, luxR family SH02_RS10045 PF07730 Histidine kinase SH02_RS10045 PF00672 HAMP domain SH02_RS10045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SH02_RS10045 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term SH02_RS10055 PF07690 Major Facilitator Superfamily SH02_RS10060 PF01568 Molydopterin dinucleotide binding domain SH02_RS10060 PF00384 Molybdopterin oxidoreductase SH02_RS10060 PF14710 Respiratory nitrate reductase alpha N-terminal SH02_RS10065 PF13247 4Fe-4S dicluster domain SH02_RS10065 PF14711 Respiratory nitrate reductase beta C-terminal SH02_RS10070 PF02613 Nitrate reductase delta subunit SH02_RS10075 PF02665 Nitrate reductase gamma subunit SH02_RS10095 PF00551 Formyl transferase SH02_RS10095 PF01842 ACT domain SH02_RS10100 PF02810 SEC-C motif SH02_RS10105 PF01734 Patatin-like phospholipase SH02_RS10115 PF00483 Nucleotidyl transferase SH02_RS10120 PF00816 H-NS histone family SH02_RS10125 PF00265 Thymidine kinase SH02_RS10130 PF13006 Insertion element 4 transposase N-terminal SH02_RS10130 PF01609 Transposase DDE domain SH02_RS10140 PF00171 Aldehyde dehydrogenase family SH02_RS10140 PF00465 Iron-containing alcohol dehydrogenase SH02_RS10145 PF01914 MarC family integral membrane protein SH02_RS10150 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SH02_RS10155 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS10160 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS10160 PF12911 N-terminal TM domain of oligopeptide transport permease C SH02_RS10165 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SH02_RS10165 PF00005 ABC transporter SH02_RS10170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SH02_RS10170 PF00005 ABC transporter SH02_RS10175 PF04269 Protein of unknown function, DUF440 SH02_RS10180 PF13091 PLD-like domain SH02_RS10180 PF13396 Phospholipase_D-nuclease N-terminal SH02_RS10190 PF02254 TrkA-N domain SH02_RS10190 PF07885 Ion channel SH02_RS10195 PF03795 YCII-related domain SH02_RS10200 PF03544 Gram-negative bacterial TonB protein C-terminal SH02_RS10205 PF03061 Thioesterase superfamily SH02_RS10210 PF04279 Intracellular septation protein A SH02_RS10220 PF03922 OmpW family SH02_RS10225 PF05974 Domain of unknown function (DUF892) SH02_RS10230 PF05974 Domain of unknown function (DUF892) SH02_RS10235 PF10685 Stress-induced bacterial acidophilic repeat motif SH02_RS10240 PF00290 Tryptophan synthase alpha chain SH02_RS10245 PF00291 Pyridoxal-phosphate dependent enzyme SH02_RS10250 PF00218 Indole-3-glycerol phosphate synthase SH02_RS10250 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase SH02_RS10255 PF00591 Glycosyl transferase family, a/b domain SH02_RS10255 PF02885 Glycosyl transferase family, helical bundle domain SH02_RS10255 PF00117 Glutamine amidotransferase class-I SH02_RS10260 PF04715 Anthranilate synthase component I, N terminal region SH02_RS10260 PF00425 chorismate binding enzyme SH02_RS10265 PF02811 PHP domain SH02_RS10270 PF01300 Telomere recombination SH02_RS10275 PF09972 Predicted membrane protein (DUF2207) SH02_RS10280 PF01479 S4 domain SH02_RS10280 PF00849 RNA pseudouridylate synthase SH02_RS10285 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP SH02_RS10285 PF12557 Cob(I)alamin adenosyltransferase N terminal SH02_RS10290 PF00106 short chain dehydrogenase SH02_RS10300 PF01343 Peptidase family S49 SH02_RS10300 PF08496 Peptidase family S49 N-terminal SH02_RS10305 PF10692 Protein of unknown function (DUF2498) SH02_RS10315 PF08272 Topoisomerase I zinc-ribbon-like SH02_RS10315 PF01131 DNA topoisomerase SH02_RS10315 PF01751 Toprim domain SH02_RS10315 PF01396 Topoisomerase DNA binding C4 zinc finger SH02_RS10320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS10320 PF03466 LysR substrate binding domain SH02_RS10340 PF00330 Aconitase family (aconitate hydratase) SH02_RS10340 PF00694 Aconitase C-terminal domain SH02_RS10345 PF00925 GTP cyclohydrolase II SH02_RS10350 PF01569 PAP2 superfamily SH02_RS10355 PF06305 Lipopolysaccharide assembly protein A domain SH02_RS10360 PF18073 Rubredoxin metal binding domain SH02_RS10365 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SH02_RS10370 PF01253 Translation initiation factor SUI1 SH02_RS10375 PF05433 Glycine zipper 2TM domain SH02_RS10380 PF00455 DeoR C terminal sensor domain SH02_RS10380 PF08220 DeoR-like helix-turn-helix domain SH02_RS10390 PF00563 EAL domain SH02_RS10390 PF00990 Diguanylate cyclase, GGDEF domain SH02_RS10390 PF13426 PAS domain SH02_RS10400 PF17876 Cold shock domain SH02_RS10400 PF00773 RNB domain SH02_RS10400 PF00575 S1 RNA binding domain SH02_RS10400 PF08206 Ribonuclease B OB domain SH02_RS10415 PF04480 Protein of unknown function (DUF559) SH02_RS10420 PF00005 ABC transporter SH02_RS10425 PF00005 ABC transporter SH02_RS10425 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SH02_RS10430 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS10430 PF12911 N-terminal TM domain of oligopeptide transport permease C SH02_RS10435 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS10440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SH02_RS10450 PF10820 Protein of unknown function (DUF2543) SH02_RS10455 PF00324 Amino acid permease SH02_RS10460 PF00120 Glutamine synthetase, catalytic domain SH02_RS10465 PF07722 Peptidase C26 SH02_RS10470 PF01381 Helix-turn-helix SH02_RS10470 PF07883 Cupin domain SH02_RS10475 PF00171 Aldehyde dehydrogenase family SH02_RS10480 PF01266 FAD dependent oxidoreductase SH02_RS10485 PF00202 Aminotransferase class-III SH02_RS10490 PF02954 Bacterial regulatory protein, Fis family SH02_RS10490 PF00158 Sigma-54 interaction domain SH02_RS10495 PF04012 PspA/IM30 family SH02_RS10500 PF06667 Phage shock protein B SH02_RS10505 PF04024 PspC domain SH02_RS10510 PF09584 Phage shock protein PspD (Phageshock_PspD) SH02_RS10515 PF00581 Rhodanese-like domain SH02_RS10520 PF00128 Alpha amylase, catalytic domain SH02_RS10525 PF01547 Bacterial extracellular solute-binding protein SH02_RS10530 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS10535 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS10540 PF00107 Zinc-binding dehydrogenase SH02_RS10545 PF01261 Xylose isomerase-like TIM barrel SH02_RS10550 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SH02_RS10550 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SH02_RS10555 PF03632 Glycosyl hydrolase family 65 central catalytic domain SH02_RS10555 PF03633 Glycosyl hydrolase family 65, C-terminal domain SH02_RS10555 PF03636 Glycosyl hydrolase family 65, N-terminal domain SH02_RS10560 PF13419 Haloacid dehalogenase-like hydrolase SH02_RS10570 PF09381 Outer membrane protein G (OmpG) SH02_RS10575 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SH02_RS10575 PF00356 Bacterial regulatory proteins, lacI family SH02_RS10580 PF04317 YcjX-like family, DUF463 SH02_RS10585 PF05128 Domain of unknown function (DUF697) SH02_RS10590 PF13188 PAS domain SH02_RS10590 PF18024 Helix-turn-helix domain SH02_RS10590 PF00158 Sigma-54 interaction domain SH02_RS10595 PF08534 Redoxin SH02_RS10600 PF13378 Enolase C-terminal domain-like SH02_RS10600 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SH02_RS10605 PF00246 Zinc carboxypeptidase SH02_RS10615 PF12146 Serine aminopeptidase, S33 SH02_RS10620 PF03466 LysR substrate binding domain SH02_RS10620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS10630 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SH02_RS10635 PF00924 Mechanosensitive ion channel SH02_RS10640 PF01609 Transposase DDE domain SH02_RS10640 PF05598 Transposase domain (DUF772) SH02_RS10645 PF10749 Protein of unknown function (DUF2534) SH02_RS10650 PF00582 Universal stress protein family SH02_RS10655 PF00325 Bacterial regulatory proteins, crp family SH02_RS10655 PF00027 Cyclic nucleotide-binding domain SH02_RS10660 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SH02_RS10660 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SH02_RS10665 PF03806 AbgT putative transporter family SH02_RS10675 PF01546 Peptidase family M20/M25/M40 SH02_RS10680 PF01546 Peptidase family M20/M25/M40 SH02_RS10680 PF07687 Peptidase dimerisation domain SH02_RS10685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS10685 PF03466 LysR substrate binding domain SH02_RS10695 PF01713 Smr domain SH02_RS10700 PF00990 Diguanylate cyclase, GGDEF domain SH02_RS10700 PF08448 PAS fold SH02_RS10705 PF01544 CorA-like Mg2+ transporter protein SH02_RS10715 PF00271 Helicase conserved C-terminal domain SH02_RS10715 PF00270 DEAD/DEAH box helicase SH02_RS10715 PF03880 DbpA RNA binding domain SH02_RS10720 PF01171 PP-loop family SH02_RS10725 PF12167 Arm DNA-binding domain SH02_RS10725 PF00589 Phage integrase family SH02_RS10730 PF06806 Putative excisionase (DUF1233) SH02_RS10735 PF06688 Protein of unknown function (DUF1187) SH02_RS10745 PF03837 RecT family SH02_RS10750 PF12684 PDDEXK-like domain of unknown function (DUF3799) SH02_RS10750 PF06630 Enterobacterial exodeoxyribonuclease VIII SH02_RS10760 PF04181 Rtr1/RPAP2 family SH02_RS10770 PF14163 Super-infection exclusion protein B SH02_RS10780 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT SH02_RS10785 PF06254 Putative bacterial toxin ydaT SH02_RS10790 PF07120 Protein of unknown function (DUF1376) SH02_RS10795 PF01695 IstB-like ATP binding protein SH02_RS10800 PF07789 Protein of unknown function (DUF1627) SH02_RS10805 PF03245 Bacteriophage Rz lysis protein SH02_RS10810 PF02386 Cation transport protein SH02_RS10815 PF02195 ParB-like nuclease domain SH02_RS10830 PF06791 Prophage tail length tape measure protein SH02_RS10835 PF06316 Enterobacterial Ail/Lom protein SH02_RS10840 PF05598 Transposase domain (DUF772) SH02_RS10840 PF01609 Transposase DDE domain SH02_RS10845 PF13505 Outer membrane protein beta-barrel domain SH02_RS10860 PF08400 Prophage tail fibre N-terminal SH02_RS10860 PF03335 Phage tail fibre repeat SH02_RS10860 PF07484 Phage Tail Collar Domain SH02_RS10865 PF02413 Caudovirales tail fibre assembly protein, lambda gpK SH02_RS10870 PF02796 Helix-turn-helix domain of resolvase SH02_RS10870 PF00239 Resolvase, N terminal domain SH02_RS10880 PF00582 Universal stress protein family SH02_RS10885 PF00267 Gram-negative porin SH02_RS10890 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II SH02_RS10890 PF10371 Domain of unknown function SH02_RS10890 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase SH02_RS10890 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg SH02_RS10890 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SH02_RS10895 PF03891 Domain of unknown function (DUF333) SH02_RS10900 PF03724 META domain SH02_RS10905 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SH02_RS10905 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SH02_RS10910 PF11739 Dicarboxylate transport SH02_RS10915 PF13617 YnbE-like lipoprotein SH02_RS10920 PF07027 Protein of unknown function (DUF1318) SH02_RS10925 PF14525 AraC-binding-like domain SH02_RS10925 PF12833 Helix-turn-helix domain SH02_RS10930 PF00171 Aldehyde dehydrogenase family SH02_RS10935 PF02728 Copper amine oxidase, N3 domain SH02_RS10935 PF07833 Copper amine oxidase N-terminal domain SH02_RS10935 PF02727 Copper amine oxidase, N2 domain SH02_RS10935 PF01179 Copper amine oxidase, enzyme domain SH02_RS10940 PF01575 MaoC like domain SH02_RS10940 PF00171 Aldehyde dehydrogenase family SH02_RS10945 PF05138 Phenylacetic acid catabolic protein SH02_RS10950 PF06243 Phenylacetic acid degradation B SH02_RS10955 PF05138 Phenylacetic acid catabolic protein SH02_RS10960 PF01883 Iron-sulfur cluster assembly protein SH02_RS10965 PF00175 Oxidoreductase NAD-binding domain SH02_RS10965 PF00970 Oxidoreductase FAD-binding domain SH02_RS10965 PF00111 2Fe-2S iron-sulfur cluster binding domain SH02_RS10970 PF00378 Enoyl-CoA hydratase/isomerase SH02_RS10975 PF00378 Enoyl-CoA hydratase/isomerase SH02_RS10980 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain SH02_RS10980 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SH02_RS10980 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SH02_RS10985 PF03061 Thioesterase superfamily SH02_RS10990 PF02803 Thiolase, C-terminal domain SH02_RS10990 PF00108 Thiolase, N-terminal domain SH02_RS10995 PF00501 AMP-binding enzyme SH02_RS10995 PF14535 AMP-binding enzyme C-terminal domain SH02_RS11000 PF08223 PaaX-like protein C-terminal domain SH02_RS11000 PF07848 PaaX-like protein SH02_RS11005 PF00132 Bacterial transferase hexapeptide (six repeats) SH02_RS11015 PF00665 Integrase core domain SH02_RS11015 PF13276 HTH-like domain SH02_RS11020 PF01527 Transposase SH02_RS11025 PF00665 Integrase core domain SH02_RS11025 PF13936 Helix-turn-helix domain SH02_RS11035 PF00248 Aldo/keto reductase family SH02_RS11040 PF10971 Protein of unknown function (DUF2773) SH02_RS11045 PF01066 CDP-alcohol phosphatidyltransferase SH02_RS11055 PF12146 Serine aminopeptidase, S33 SH02_RS11055 PF12147 Putative methyltransferase SH02_RS11060 PF00782 Dual specificity phosphatase, catalytic domain SH02_RS11065 PF02525 Flavodoxin-like fold SH02_RS11070 PF11898 Domain of unknown function (DUF3418) SH02_RS11070 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold SH02_RS11070 PF04408 Helicase associated domain (HA2) SH02_RS11070 PF00271 Helicase conserved C-terminal domain SH02_RS11070 PF00270 DEAD/DEAH box helicase SH02_RS11075 PF02698 DUF218 domain SH02_RS11080 PF00171 Aldehyde dehydrogenase family SH02_RS11085 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SH02_RS11085 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SH02_RS11090 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SH02_RS11090 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SH02_RS11095 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SH02_RS11095 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SH02_RS11100 PF01292 Prokaryotic cytochrome b561 SH02_RS11110 PF01848 Hok/gef family SH02_RS11115 PF00672 HAMP domain SH02_RS11115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SH02_RS11115 PF02203 Tar ligand binding domain homologue SH02_RS11120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS11120 PF03466 LysR substrate binding domain SH02_RS11125 PF07063 Domain of unknown function (DUF1338) SH02_RS11130 PF04349 Periplasmic glucan biosynthesis protein, MdoG SH02_RS11140 PF04325 Protein of unknown function (DUF465) SH02_RS11145 PF13302 Acetyltransferase (GNAT) domain SH02_RS11150 PF18836 Beta solenoid repeat from YDCK SH02_RS11155 PF03595 Voltage-dependent anion channel SH02_RS11160 PF03848 Tellurite resistance protein TehB SH02_RS11165 PF11769 Protein of unknown function (DUF3313) SH02_RS11175 PF01797 Transposase IS200 like SH02_RS11180 PF12323 Helix-turn-helix domain SH02_RS11180 PF07282 Putative transposase DNA-binding domain SH02_RS11180 PF01385 Probable transposase SH02_RS11185 PF03594 Benzoate membrane transport protein SH02_RS11190 PF07883 Cupin domain SH02_RS11190 PF01381 Helix-turn-helix SH02_RS11195 PF01136 Peptidase family U32 SH02_RS11195 PF12392 Collagenase SH02_RS11200 PF10829 Protein of unknown function (DUF2554) SH02_RS11205 PF07927 HicA toxin of bacterial toxin-antitoxin, SH02_RS11210 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system SH02_RS11210 PF01381 Helix-turn-helix SH02_RS11215 PF00155 Aminotransferase class I and II SH02_RS11215 PF00392 Bacterial regulatory proteins, gntR family SH02_RS11220 PF13416 Bacterial extracellular solute-binding protein SH02_RS11225 PF00005 ABC transporter SH02_RS11225 PF08402 TOBE domain SH02_RS11230 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS11235 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS11240 PF00171 Aldehyde dehydrogenase family SH02_RS11250 PF10753 Toxin GhoT_OrtT SH02_RS11255 PF10735 Protein of unknown function (DUF2526) SH02_RS11260 PF04657 Putative inner membrane exporter, YdcZ SH02_RS11265 PF00583 Acetyltransferase (GNAT) family SH02_RS11270 PF16884 N-terminal domain of oxidoreductase SH02_RS11270 PF00107 Zinc-binding dehydrogenase SH02_RS11275 PF07729 FCD domain SH02_RS11275 PF00392 Bacterial regulatory proteins, gntR family SH02_RS11280 PF07715 TonB-dependent Receptor Plug Domain SH02_RS11280 PF00593 TonB dependent receptor SH02_RS11290 PF00324 Amino acid permease SH02_RS11295 PF13417 Glutathione S-transferase, N-terminal domain SH02_RS11300 PF17520 Family of unknown function (DUF5445) SH02_RS11305 PF03527 RHS protein SH02_RS11315 PF01609 Transposase DDE domain SH02_RS11315 PF13808 DDE_Tnp_1-associated SH02_RS11320 PF01609 Transposase DDE domain SH02_RS11320 PF13808 DDE_Tnp_1-associated SH02_RS11325 PF01361 Tautomerase enzyme SH02_RS11330 PF01613 Flavin reductase like domain SH02_RS11335 PF00797 N-acetyltransferase SH02_RS11340 PF02567 Phenazine biosynthesis-like protein SH02_RS11345 PF02665 Nitrate reductase gamma subunit SH02_RS11350 PF02613 Nitrate reductase delta subunit SH02_RS11355 PF14711 Respiratory nitrate reductase beta C-terminal SH02_RS11355 PF13247 4Fe-4S dicluster domain SH02_RS11360 PF14710 Respiratory nitrate reductase alpha N-terminal SH02_RS11360 PF00384 Molybdopterin oxidoreductase SH02_RS11360 PF01568 Molydopterin dinucleotide binding domain SH02_RS11365 PF07690 Major Facilitator Superfamily SH02_RS11375 PF00267 Gram-negative porin SH02_RS11380 PF00892 EamA-like transporter family SH02_RS11385 PF00384 Molybdopterin oxidoreductase SH02_RS11385 PF01568 Molydopterin dinucleotide binding domain SH02_RS11385 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SH02_RS11390 PF01568 Molydopterin dinucleotide binding domain SH02_RS11390 PF00384 Molybdopterin oxidoreductase SH02_RS11390 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SH02_RS11395 PF13247 4Fe-4S dicluster domain SH02_RS11395 PF12800 4Fe-4S binding domain SH02_RS11395 PF09163 Formate dehydrogenase N, transmembrane SH02_RS11400 PF01292 Prokaryotic cytochrome b561 SH02_RS11405 PF01381 Helix-turn-helix SH02_RS11410 PF08240 Alcohol dehydrogenase GroES-like domain SH02_RS11410 PF00107 Zinc-binding dehydrogenase SH02_RS11415 PF03949 Malic enzyme, NAD binding domain SH02_RS11415 PF00390 Malic enzyme, N-terminal domain SH02_RS11420 PF08136 30S ribosomal protein subunit S22 family SH02_RS11425 PF10684 Putative biofilm-dependent modulation protein SH02_RS11430 PF02566 OsmC-like protein SH02_RS11435 PF00005 ABC transporter SH02_RS11435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SH02_RS11440 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SH02_RS11440 PF00005 ABC transporter SH02_RS11445 PF12911 N-terminal TM domain of oligopeptide transport permease C SH02_RS11445 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS11450 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS11455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SH02_RS11460 PF01427 D-ala-D-ala dipeptidase SH02_RS11465 PF13426 PAS domain SH02_RS11465 PF00990 Diguanylate cyclase, GGDEF domain SH02_RS11465 PF00563 EAL domain SH02_RS11470 PF00990 Diguanylate cyclase, GGDEF domain SH02_RS11475 PF02638 Glycosyl hydrolase-like 10 SH02_RS11480 PF13520 Amino acid permease SH02_RS11485 PF00282 Pyridoxal-dependent decarboxylase conserved domain SH02_RS11495 PF00675 Insulinase (Peptidase family M16) SH02_RS11495 PF05193 Peptidase M16 inactive domain SH02_RS11500 PF07715 TonB-dependent Receptor Plug Domain SH02_RS11505 PF00005 ABC transporter SH02_RS11505 PF06472 ABC transporter transmembrane region 2 SH02_RS11510 PF13186 Iron-sulfur cluster-binding domain SH02_RS11510 PF04055 Radical SAM superfamily SH02_RS11515 PF00884 Sulfatase SH02_RS11520 PF12833 Helix-turn-helix domain SH02_RS11525 PF17073 Two-component-system connector protein SH02_RS11530 PF00384 Molybdopterin oxidoreductase SH02_RS11535 PF09160 FimH, mannose binding SH02_RS11540 PF00419 Fimbrial protein SH02_RS11545 PF00419 Fimbrial protein SH02_RS11550 PF00577 Outer membrane usher protein SH02_RS11550 PF13953 PapC C-terminal domain SH02_RS11560 PF13657 HipA N-terminal domain SH02_RS11560 PF07804 HipA-like C-terminal domain SH02_RS11565 PF01381 Helix-turn-helix SH02_RS11570 PF03797 Autotransporter beta-domain SH02_RS11575 PF13018 Extended Signal Peptide of Type V secretion system SH02_RS11580 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SH02_RS11580 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SH02_RS11585 PF04198 Putative sugar-binding domain SH02_RS11590 PF00005 ABC transporter SH02_RS11595 PF02653 Branched-chain amino acid transport system / permease component SH02_RS11600 PF02653 Branched-chain amino acid transport system / permease component SH02_RS11605 PF13407 Periplasmic binding protein domain SH02_RS11610 PF01791 DeoC/LacD family aldolase SH02_RS11615 PF03992 Antibiotic biosynthesis monooxygenase SH02_RS11620 PF13649 Methyltransferase domain SH02_RS11625 PF01062 Bestrophin, RFP-TM, chloride channel SH02_RS11635 PF01232 Mannitol dehydrogenase Rossmann domain SH02_RS11635 PF08125 Mannitol dehydrogenase C-terminal domain SH02_RS11640 PF00990 Diguanylate cyclase, GGDEF domain SH02_RS11645 PF13811 Domain of unknown function (DUF4186) SH02_RS11650 PF04960 Glutaminase SH02_RS11655 PF00171 Aldehyde dehydrogenase family SH02_RS11660 PF03466 LysR substrate binding domain SH02_RS11660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS11670 PF07690 Major Facilitator Superfamily SH02_RS11675 PF01914 MarC family integral membrane protein SH02_RS11680 PF01047 MarR family SH02_RS11685 PF12833 Helix-turn-helix domain SH02_RS11690 PF13999 MarB protein SH02_RS11695 PF00892 EamA-like transporter family SH02_RS11700 PF07690 Major Facilitator Superfamily SH02_RS11710 PF00990 Diguanylate cyclase, GGDEF domain SH02_RS11715 PF04076 Bacterial OB fold (BOF) protein SH02_RS11720 PF02464 Competence-damaged protein SH02_RS11725 PF01432 Peptidase family M3 SH02_RS11730 PF00106 short chain dehydrogenase SH02_RS11735 PF00392 Bacterial regulatory proteins, gntR family SH02_RS11735 PF07729 FCD domain SH02_RS11740 PF14001 YdfZ protein SH02_RS11745 PF08125 Mannitol dehydrogenase C-terminal domain SH02_RS11745 PF01232 Mannitol dehydrogenase Rossmann domain SH02_RS11750 PF07690 Major Facilitator Superfamily SH02_RS11750 PF00083 Sugar (and other) transporter SH02_RS11760 PF00239 Resolvase, N terminal domain SH02_RS11760 PF02796 Helix-turn-helix domain of resolvase SH02_RS11765 PF02413 Caudovirales tail fibre assembly protein, lambda gpK SH02_RS11770 PF07484 Phage Tail Collar Domain SH02_RS11770 PF03335 Phage tail fibre repeat SH02_RS11775 PF07471 Phage DNA packaging protein Nu1 SH02_RS11780 PF13132 Domain of unknown function (DUF3950) SH02_RS11785 PF07166 Protein of unknown function (DUF1398) SH02_RS11790 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system SH02_RS11800 PF00313 'Cold-shock' DNA-binding domain SH02_RS11805 PF10721 Protein of unknown function (DUF2514) SH02_RS11810 PF00959 Phage lysozyme SH02_RS11815 PF07041 Protein of unknown function (DUF1327) SH02_RS11820 PF04971 Bacteriophage P21 holin S SH02_RS11825 PF00313 'Cold-shock' DNA-binding domain SH02_RS11830 PF00313 'Cold-shock' DNA-binding domain SH02_RS11835 PF03589 Antitermination protein SH02_RS11840 PF06147 Protein of unknown function (DUF968) SH02_RS11855 PF01848 Hok/gef family SH02_RS11860 PF05016 ParE toxin of type II toxin-antitoxin system, parDE SH02_RS11865 PF04221 RelB antitoxin SH02_RS11870 PF14282 FlxA-like protein SH02_RS11885 PF01381 Helix-turn-helix SH02_RS11890 PF07151 Protein of unknown function (DUF1391) SH02_RS11905 PF05358 DicB protein SH02_RS11910 PF07358 Protein of unknown function (DUF1482) SH02_RS11925 PF12167 Arm DNA-binding domain SH02_RS11925 PF00589 Phage integrase family SH02_RS11930 PF08240 Alcohol dehydrogenase GroES-like domain SH02_RS11930 PF00107 Zinc-binding dehydrogenase SH02_RS11935 PF13378 Enolase C-terminal domain-like SH02_RS11935 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SH02_RS11940 PF02694 Uncharacterised BCR, YnfA/UPF0060 family SH02_RS11945 PF06932 Protein of unknown function (DUF1283) SH02_RS11950 PF13302 Acetyltransferase (GNAT) domain SH02_RS11955 PF06788 Uncharacterised protein family (UPF0257) SH02_RS11960 PF06649 Protein of unknown function (DUF1161) SH02_RS11965 PF01568 Molydopterin dinucleotide binding domain SH02_RS11965 PF00384 Molybdopterin oxidoreductase SH02_RS11965 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SH02_RS11970 PF00384 Molybdopterin oxidoreductase SH02_RS11970 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SH02_RS11970 PF01568 Molydopterin dinucleotide binding domain SH02_RS11975 PF13247 4Fe-4S dicluster domain SH02_RS11975 PF12800 4Fe-4S binding domain SH02_RS11980 PF04976 DMSO reductase anchor subunit (DmsC) SH02_RS11985 PF02613 Nitrate reductase delta subunit SH02_RS11990 PF00654 Voltage gated chloride channel SH02_RS12000 PF00480 ROK family SH02_RS12005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS12005 PF03466 LysR substrate binding domain SH02_RS12010 PF07690 Major Facilitator Superfamily SH02_RS12025 PF00089 Trypsin SH02_RS12030 PF00893 Small Multidrug Resistance protein SH02_RS12035 PF00893 Small Multidrug Resistance protein SH02_RS12040 PF01594 AI-2E family transporter SH02_RS12045 PF02233 NAD(P) transhydrogenase beta subunit SH02_RS12050 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SH02_RS12050 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch SH02_RS12050 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SH02_RS12055 PF07338 Protein of unknown function (DUF1471) SH02_RS12060 PF13520 Amino acid permease SH02_RS12070 PF06942 GlpM protein SH02_RS12075 PF00072 Response regulator receiver domain SH02_RS12075 PF00486 Transcriptional regulatory protein, C terminal SH02_RS12080 PF00512 His Kinase A (phospho-acceptor) domain SH02_RS12080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SH02_RS12080 PF00672 HAMP domain SH02_RS12085 PF05472 DNA replication terminus site-binding protein (Ter protein) SH02_RS12090 PF00206 Lyase SH02_RS12090 PF10415 Fumarase C C-terminus SH02_RS12095 PF05681 Fumarate hydratase (Fumerase) SH02_RS12095 PF05683 Fumarase C-terminus SH02_RS12100 PF01238 Phosphomannose isomerase type I SH02_RS12105 PF06097 Bacterial protein of unknown function (DUF945) SH02_RS12110 PF03573 outer membrane porin, OprD family SH02_RS12120 PF00703 Glycosyl hydrolases family 2 SH02_RS12120 PF02836 Glycosyl hydrolases family 2, TIM barrel domain SH02_RS12120 PF02837 Glycosyl hydrolases family 2, sugar binding domain SH02_RS12125 PF00440 Bacterial regulatory proteins, tetR family SH02_RS12135 PF00356 Bacterial regulatory proteins, lacI family SH02_RS12135 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SH02_RS12140 PF00367 phosphotransferase system, EIIB SH02_RS12140 PF02378 Phosphotransferase system, EIIC SH02_RS12145 PF00155 Aminotransferase class I and II SH02_RS12150 PF00962 Adenosine/AMP deaminase SH02_RS12155 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SH02_RS12155 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SH02_RS12165 PF05321 Haemolysin expression modulating protein SH02_RS12170 PF10754 Protein of unknown function (DUF2569) SH02_RS12175 PF02508 Rnf-Nqr subunit, membrane protein SH02_RS12180 PF04060 Putative Fe-S cluster SH02_RS12185 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit SH02_RS12185 PF10531 SLBB domain SH02_RS12185 PF13375 RnfC Barrel sandwich hybrid domain SH02_RS12185 PF12838 4Fe-4S dicluster domain SH02_RS12190 PF03116 NQR2, RnfD, RnfE family SH02_RS12195 PF04205 FMN-binding domain SH02_RS12200 PF02508 Rnf-Nqr subunit, membrane protein SH02_RS12205 PF00633 Helix-hairpin-helix motif SH02_RS12205 PF00730 HhH-GPD superfamily base excision DNA repair protein SH02_RS12205 PF10576 Iron-sulfur binding domain of endonuclease III SH02_RS12215 PF00854 POT family SH02_RS12220 PF00043 Glutathione S-transferase, C-terminal domain SH02_RS12220 PF02798 Glutathione S-transferase, N-terminal domain SH02_RS12225 PF08543 Phosphomethylpyrimidine kinase SH02_RS12230 PF01479 S4 domain SH02_RS12230 PF00579 tRNA synthetases class I (W and Y) SH02_RS12235 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region SH02_RS12235 PF01243 Pyridoxamine 5'-phosphate oxidase SH02_RS12240 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme SH02_RS12245 PF03702 Anhydro-N-acetylmuramic acid kinase SH02_RS12250 PF05433 Glycine zipper 2TM domain SH02_RS12255 PF01047 MarR family SH02_RS12260 PF07869 Protein of unknown function (DUF1656) SH02_RS12265 PF00529 HlyD membrane-fusion protein of T1SS SH02_RS12265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SH02_RS12270 PF04632 Fusaric acid resistance protein family SH02_RS12275 PF00080 Copper/zinc superoxide dismutase (SODC) SH02_RS12280 PF00248 Aldo/keto reductase family SH02_RS12285 PF06945 Protein of unknown function (DUF1289) SH02_RS12290 PF00440 Bacterial regulatory proteins, tetR family SH02_RS12290 PF16925 Tetracyclin repressor-like, C-terminal domain SH02_RS12295 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SH02_RS12300 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SH02_RS12305 PF00929 Exonuclease SH02_RS12310 PF00271 Helicase conserved C-terminal domain SH02_RS12310 PF00270 DEAD/DEAH box helicase SH02_RS12310 PF08494 DEAD/H associated SH02_RS12315 PF00462 Glutaredoxin SH02_RS12320 PF00877 NlpC/P60 family SH02_RS12325 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SH02_RS12325 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SH02_RS12330 PF07690 Major Facilitator Superfamily SH02_RS12340 PF00356 Bacterial regulatory proteins, lacI family SH02_RS12345 PF03466 LysR substrate binding domain SH02_RS12345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS12350 PF07690 Major Facilitator Superfamily SH02_RS12360 PF00677 Lumazine binding domain SH02_RS12365 PF01554 MatE SH02_RS12370 PF16168 Adhesin of bacterial autotransporter system, probable stalk SH02_RS12370 PF03212 Pertactin SH02_RS12385 PF08803 Putative mono-oxygenase ydhR SH02_RS12390 PF13454 FAD-NAD(P)-binding SH02_RS12400 PF01292 Prokaryotic cytochrome b561 SH02_RS12405 PF13247 4Fe-4S dicluster domain SH02_RS12415 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 SH02_RS12415 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain SH02_RS12420 PF13247 4Fe-4S dicluster domain SH02_RS12420 PF12800 4Fe-4S binding domain SH02_RS12425 PF10965 Protein of unknown function (DUF2767) SH02_RS12430 PF00224 Pyruvate kinase, barrel domain SH02_RS12430 PF02887 Pyruvate kinase, alpha/beta domain SH02_RS12435 PF04728 Lipoprotein leucine-zipper SH02_RS12440 PF03734 L,D-transpeptidase catalytic domain SH02_RS12440 PF01476 LysM domain SH02_RS12440 PF17969 L,D-transpeptidase C-terminal domain SH02_RS12445 PF02657 Fe-S metabolism associated domain SH02_RS12450 PF00266 Aminotransferase class-V SH02_RS12455 PF01458 Uncharacterized protein family (UPF0051) SH02_RS12460 PF00005 ABC transporter SH02_RS12465 PF01458 Uncharacterized protein family (UPF0051) SH02_RS12470 PF01521 Iron-sulphur cluster biosynthesis SH02_RS12475 PF15930 Domain of unknown function SH02_RS12480 PF03061 Thioesterase superfamily SH02_RS12485 PF02913 FAD linked oxidases, C-terminal domain SH02_RS12485 PF01565 FAD binding domain SH02_RS12485 PF13183 4Fe-4S dicluster domain SH02_RS12490 PF01594 AI-2E family transporter SH02_RS12495 PF08965 Domain of unknown function (DUF1870) SH02_RS12500 PF07690 Major Facilitator Superfamily SH02_RS12505 PF07690 Major Facilitator Superfamily SH02_RS12510 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SH02_RS12510 PF08501 Shikimate dehydrogenase substrate binding domain SH02_RS12515 PF01487 Type I 3-dehydroquinase SH02_RS12520 PF01144 Coenzyme A transferase SH02_RS12525 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SH02_RS12525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SH02_RS12525 PF02770 Acyl-CoA dehydrogenase, middle domain SH02_RS12530 PF02311 AraC-like ligand binding domain SH02_RS12530 PF12833 Helix-turn-helix domain SH02_RS12540 PF01012 Electron transfer flavoprotein domain SH02_RS12545 PF01012 Electron transfer flavoprotein domain SH02_RS12545 PF00766 Electron transfer flavoprotein FAD-binding domain SH02_RS12550 PF01494 FAD binding domain SH02_RS12560 PF00501 AMP-binding enzyme SH02_RS12560 PF13193 AMP-binding enzyme C-terminal domain SH02_RS12565 PF00391 PEP-utilising enzyme, mobile domain SH02_RS12565 PF02896 PEP-utilising enzyme, TIM barrel domain SH02_RS12565 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain SH02_RS12575 PF03618 Kinase/pyrophosphorylase SH02_RS12580 PF00793 DAHP synthetase I family SH02_RS12585 PF10636 Hemin uptake protein hemP SH02_RS12590 PF02696 Uncharacterized ACR, YdiU/UPF0061 family SH02_RS12595 PF00563 EAL domain SH02_RS12600 PF00877 NlpC/P60 family SH02_RS12610 PF00255 Glutathione peroxidase SH02_RS12615 PF01032 FecCD transport family SH02_RS12620 PF00216 Bacterial DNA-binding protein SH02_RS12625 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain SH02_RS12625 PF03484 tRNA synthetase B5 domain SH02_RS12625 PF03483 B3/4 domain SH02_RS12625 PF01588 Putative tRNA binding domain SH02_RS12625 PF03147 Ferredoxin-fold anticodon binding domain SH02_RS12630 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SH02_RS12630 PF01409 tRNA synthetases class II core domain (F) SH02_RS12640 PF00453 Ribosomal protein L20 SH02_RS12645 PF01632 Ribosomal protein L35 SH02_RS12650 PF00707 Translation initiation factor IF-3, C-terminal domain SH02_RS12650 PF05198 Translation initiation factor IF-3, N-terminal domain SH02_RS12655 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SH02_RS12655 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SH02_RS12655 PF03129 Anticodon binding domain SH02_RS12655 PF02824 TGS domain SH02_RS12670 PF04338 Protein of unknown function, DUF481 SH02_RS12675 PF00294 pfkB family carbohydrate kinase SH02_RS12680 PF11080 Endoribonuclease GhoS SH02_RS12685 PF03881 Fructosamine kinase SH02_RS12690 PF14002 YniB-like protein SH02_RS12695 PF13419 Haloacid dehalogenase-like hydrolase SH02_RS12700 PF04307 LexA-binding, inner membrane-associated putative hydrolase SH02_RS12705 PF00375 Sodium:dicarboxylate symporter family SH02_RS12715 PF10729 Cell division activator CedA SH02_RS12720 PF00199 Catalase SH02_RS12720 PF06628 Catalase-related immune-responsive SH02_RS12720 PF18011 C-terminal domain found in long catalases SH02_RS12725 PF04794 YdjC-like protein SH02_RS12730 PF02056 Family 4 glycosyl hydrolase SH02_RS12730 PF11975 Family 4 glycosyl hydrolase C-terminal domain SH02_RS12735 PF12833 Helix-turn-helix domain SH02_RS12735 PF07883 Cupin domain SH02_RS12740 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SH02_RS12745 PF02378 Phosphotransferase system, EIIC SH02_RS12750 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SH02_RS12755 PF04355 SmpA / OmlA family SH02_RS12760 PF02540 NAD synthase SH02_RS12775 PF05962 HutD SH02_RS12780 PF07813 LTXXQ motif family protein SH02_RS12785 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family SH02_RS12790 PF04996 Succinylarginine dihydrolase SH02_RS12795 PF00171 Aldehyde dehydrogenase family SH02_RS12800 PF04958 Arginine N-succinyltransferase beta subunit SH02_RS12805 PF00202 Aminotransferase class-III SH02_RS12810 PF03372 Endonuclease/Exonuclease/phosphatase family SH02_RS12815 PF09335 SNARE associated Golgi protein SH02_RS12825 PF09335 SNARE associated Golgi protein SH02_RS12830 PF02627 Carboxymuconolactone decarboxylase family SH02_RS12835 PF13416 Bacterial extracellular solute-binding protein SH02_RS12840 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS12845 PF00005 ABC transporter SH02_RS12850 PF00581 Rhodanese-like domain SH02_RS12855 PF01066 CDP-alcohol phosphatidyltransferase SH02_RS12860 PF00293 NUDIX domain SH02_RS12865 PF07383 Protein of unknown function (DUF1496) SH02_RS12870 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SH02_RS12870 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SH02_RS12875 PF06889 Protein of unknown function (DUF1266) SH02_RS12880 PF01131 DNA topoisomerase SH02_RS12880 PF01751 Toprim domain SH02_RS12885 PF00586 AIR synthase related protein, N-terminal domain SH02_RS12885 PF02769 AIR synthase related protein, C-terminal domain SH02_RS12895 PF00881 Nitroreductase family SH02_RS12905 PF01343 Peptidase family S49 SH02_RS12910 PF00710 Asparaginase, N-terminal SH02_RS12910 PF17763 Glutaminase/Asparaginase C-terminal domain SH02_RS12915 PF00857 Isochorismatase family SH02_RS12920 PF00083 Sugar (and other) transporter SH02_RS12925 PF00455 DeoR C terminal sensor domain SH02_RS12925 PF08220 DeoR-like helix-turn-helix domain SH02_RS12930 PF00248 Aldo/keto reductase family SH02_RS12935 PF00294 pfkB family carbohydrate kinase SH02_RS12940 PF01116 Fructose-bisphosphate aldolase class-II SH02_RS12945 PF08240 Alcohol dehydrogenase GroES-like domain SH02_RS12945 PF00107 Zinc-binding dehydrogenase SH02_RS12950 PF00083 Sugar (and other) transporter SH02_RS12955 PF00107 Zinc-binding dehydrogenase SH02_RS12955 PF08240 Alcohol dehydrogenase GroES-like domain SH02_RS12960 PF07023 Protein of unknown function (DUF1315) SH02_RS12965 PF01641 SelR domain SH02_RS12970 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SH02_RS12970 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SH02_RS12975 PF01263 Aldose 1-epimerase SH02_RS12980 PF00248 Aldo/keto reductase family SH02_RS12985 PF06629 MltA-interacting protein MipA SH02_RS12990 PF08298 PrkA AAA domain SH02_RS12990 PF06798 PrkA serine protein kinase C-terminal domain SH02_RS12995 PF04285 Protein of unknown function (DUF444) SH02_RS13000 PF17158 Membrane-associated sensor, integral membrane domain SH02_RS13000 PF00990 Diguanylate cyclase, GGDEF domain SH02_RS13005 PF17155 Gammaproteobacterial periplasmic sensor domain SH02_RS13005 PF00990 Diguanylate cyclase, GGDEF domain SH02_RS13010 PF04073 Aminoacyl-tRNA editing domain SH02_RS13020 PF04284 Protein of unknown function (DUF441) SH02_RS13025 PF02311 AraC-like ligand binding domain SH02_RS13025 PF12833 Helix-turn-helix domain SH02_RS13030 PF07690 Major Facilitator Superfamily SH02_RS13035 PF04343 Protein of unknown function, DUF488 SH02_RS13040 PF03891 Domain of unknown function (DUF333) SH02_RS13045 PF13185 GAF domain SH02_RS13045 PF00990 Diguanylate cyclase, GGDEF domain SH02_RS13055 PF04226 Transglycosylase associated protein SH02_RS13060 PF08956 Domain of unknown function (DUF1869) SH02_RS13065 PF09313 Domain of unknown function (DUF1971) SH02_RS13070 PF01810 LysE type translocator SH02_RS13075 PF03466 LysR substrate binding domain SH02_RS13075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS13080 PF00180 Isocitrate/isopropylmalate dehydrogenase SH02_RS13085 PF02028 BCCT, betaine/carnitine/choline family transporter SH02_RS13090 PF00355 Rieske [2Fe-2S] domain SH02_RS13090 PF00848 Ring hydroxylating alpha subunit (catalytic domain) SH02_RS13095 PF00111 2Fe-2S iron-sulfur cluster binding domain SH02_RS13095 PF00970 Oxidoreductase FAD-binding domain SH02_RS13095 PF00175 Oxidoreductase NAD-binding domain SH02_RS13100 PF00570 HRDC domain SH02_RS13100 PF01612 3'-5' exonuclease SH02_RS13105 PF00501 AMP-binding enzyme SH02_RS13105 PF13193 AMP-binding enzyme C-terminal domain SH02_RS13110 PF03843 Outer membrane lipoprotein Slp family SH02_RS13115 PF00814 Glycoprotease family SH02_RS13120 PF04851 Type III restriction enzyme, res subunit SH02_RS13120 PF13307 Helicase C-terminal domain SH02_RS13125 PF01042 Endoribonuclease L-PSP SH02_RS13130 PF08986 Domain of unknown function (DUF1889) SH02_RS13135 PF03701 Uncharacterised protein family (UPF0181) SH02_RS13140 PF00425 chorismate binding enzyme SH02_RS13140 PF04715 Anthranilate synthase component I, N terminal region SH02_RS13145 PF00293 NUDIX domain SH02_RS13150 PF03313 Serine dehydratase alpha chain SH02_RS13150 PF03315 Serine dehydratase beta chain SH02_RS13155 PF00563 EAL domain SH02_RS13155 PF12792 CSS motif domain associated with EAL SH02_RS13160 PF03471 Transporter associated domain SH02_RS13160 PF03741 Integral membrane protein TerC family SH02_RS13170 PF03610 PTS system fructose IIA component SH02_RS13170 PF03830 PTS system sorbose subfamily IIB component SH02_RS13175 PF03609 PTS system sorbose-specific iic component SH02_RS13180 PF03613 PTS system mannose/fructose/sorbose family IID component SH02_RS13185 PF06173 Protein of unknown function (DUF986) SH02_RS13195 PF02659 Putative manganese efflux pump SH02_RS13200 PF13847 Methyltransferase domain SH02_RS13205 PF00313 'Cold-shock' DNA-binding domain SH02_RS13210 PF10736 Protein of unknown function (DUF2627) SH02_RS13220 PF13974 YebO-like protein SH02_RS13225 PF13998 MgrB protein SH02_RS13230 PF13996 YobH-like protein SH02_RS13235 PF09339 IclR helix-turn-helix domain SH02_RS13235 PF01614 Bacterial transcriptional regulator SH02_RS13240 PF07690 Major Facilitator Superfamily SH02_RS13250 PF00595 PDZ domain SH02_RS13250 PF03572 Peptidase family S41 SH02_RS13250 PF17804 Tail specific protease N-terminal domain SH02_RS13250 PF11818 C-terminal domain of tail specific protease (DUF3340) SH02_RS13255 PF04352 ProQ/FINO family SH02_RS13255 PF17516 ProQ C-terminal domain SH02_RS13260 PF13185 GAF domain SH02_RS13265 PF04403 Paraquat-inducible protein A SH02_RS13270 PF02470 MlaD protein SH02_RS13280 PF07351 Protein of unknown function (DUF1480) SH02_RS13285 PF07358 Protein of unknown function (DUF1482) SH02_RS13290 PF00149 Calcineurin-like phosphoesterase SH02_RS13300 PF10709 Protein of unknown function (DUF2511) SH02_RS13305 PF05425 Copper resistance protein D SH02_RS13310 PF04234 CopC domain SH02_RS13315 PF06440 DNA polymerase III, theta subunit SH02_RS13320 PF00795 Carbon-nitrogen hydrolase SH02_RS13325 PF00929 Exonuclease SH02_RS13330 PF00326 Prolyl oligopeptidase family SH02_RS13330 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain SH02_RS13335 PF04391 Protein of unknown function (DUF533) SH02_RS13345 PF13995 YebF-like protein SH02_RS13350 PF07130 YebG protein SH02_RS13355 PF02222 ATP-grasp domain SH02_RS13360 PF01081 KDPG and KHG aldolase SH02_RS13365 PF00920 Dehydratase family SH02_RS13370 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain SH02_RS13370 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain SH02_RS13380 PF01380 SIS domain SH02_RS13380 PF01418 Helix-turn-helix domain, rpiR family SH02_RS13385 PF02887 Pyruvate kinase, alpha/beta domain SH02_RS13385 PF00224 Pyruvate kinase, barrel domain SH02_RS13390 PF03279 Bacterial lipid A biosynthesis acyltransferase SH02_RS13395 PF01476 LysM domain SH02_RS13395 PF08525 Opacity-associated protein A N-terminal motif SH02_RS13395 PF01551 Peptidase family M23 SH02_RS13400 PF01297 Zinc-uptake complex component A periplasmic SH02_RS13405 PF00005 ABC transporter SH02_RS13410 PF00950 ABC 3 transport family SH02_RS13415 PF17864 RuvB AAA lid domain SH02_RS13415 PF05491 RuvB C-terminal winged helix domain SH02_RS13415 PF05496 Holliday junction DNA helicase RuvB P-loop domain SH02_RS13420 PF07499 RuvA, C-terminal domain SH02_RS13420 PF01330 RuvA N terminal domain SH02_RS13425 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family SH02_RS13430 PF02075 Crossover junction endodeoxyribonuclease RuvC SH02_RS13435 PF01709 Transcriptional regulator SH02_RS13440 PF00293 NUDIX domain SH02_RS13445 PF01336 OB-fold nucleic acid binding domain SH02_RS13445 PF02938 GAD domain SH02_RS13445 PF00152 tRNA synthetases class II (D, K and N) SH02_RS13450 PF00857 Isochorismatase family SH02_RS13455 PF01904 Protein of unknown function DUF72 SH02_RS13460 PF01124 MAPEG family SH02_RS13465 PF13649 Methyltransferase domain SH02_RS13470 PF08003 Protein of unknown function (DUF1698) SH02_RS13475 PF00384 Molybdopterin oxidoreductase SH02_RS13475 PF18364 Molybdopterin oxidoreductase N-terminal domain SH02_RS13475 PF01568 Molydopterin dinucleotide binding domain SH02_RS13480 PF03264 NapC/NirT cytochrome c family, N-terminal region SH02_RS13485 PF03932 CutC family SH02_RS13490 PF06185 YecM protein SH02_RS13495 PF03485 Arginyl tRNA synthetase N terminal domain SH02_RS13495 PF00750 tRNA synthetases class I (R) SH02_RS13495 PF05746 DALR anticodon binding domain SH02_RS13500 PF07007 Lysozyme inhibitor LprI SH02_RS13505 PF06366 Flagellar protein FlhE SH02_RS13510 PF00771 FHIPEP family SH02_RS13515 PF01312 FlhB HrpN YscU SpaS Family SH02_RS13520 PF04344 Chemotaxis phosphatase, CheZ SH02_RS13525 PF00072 Response regulator receiver domain SH02_RS13530 PF00072 Response regulator receiver domain SH02_RS13530 PF01339 CheB methylesterase SH02_RS13535 PF03705 CheR methyltransferase, all-alpha domain SH02_RS13535 PF01739 CheR methyltransferase, SAM binding domain SH02_RS13540 PF02203 Tar ligand binding domain homologue SH02_RS13540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SH02_RS13540 PF00672 HAMP domain SH02_RS13545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SH02_RS13545 PF02203 Tar ligand binding domain homologue SH02_RS13545 PF00672 HAMP domain SH02_RS13550 PF01584 CheW-like domain SH02_RS13555 PF09078 CheY binding SH02_RS13555 PF01584 CheW-like domain SH02_RS13555 PF01627 Hpt domain SH02_RS13555 PF02895 Signal transducing histidine kinase, homodimeric domain SH02_RS13555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SH02_RS13560 PF00691 OmpA family SH02_RS13560 PF13677 Membrane MotB of proton-channel complex MotA/MotB SH02_RS13565 PF01618 MotA/TolQ/ExbB proton channel family SH02_RS13570 PF05280 Flagellar transcriptional activator (FlhC) SH02_RS13575 PF05247 Flagellar transcriptional activator (FlhD) SH02_RS13580 PF00582 Universal stress protein family SH02_RS13585 PF00982 Glycosyltransferase family 20 SH02_RS13590 PF02358 Trehalose-phosphatase SH02_RS13595 PF02653 Branched-chain amino acid transport system / permease component SH02_RS13600 PF00005 ABC transporter SH02_RS13605 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SH02_RS13610 PF00210 Ferritin-like domain SH02_RS13615 PF10964 Protein of unknown function (DUF2766) SH02_RS13625 PF13992 YecR-like lipoprotein SH02_RS13630 PF00210 Ferritin-like domain SH02_RS13635 PF10678 Protein of unknown function (DUF2492) SH02_RS13640 PF03222 Tryptophan/tyrosine permease family SH02_RS13645 PF02810 SEC-C motif SH02_RS13645 PF03695 Uncharacterised protein family (UPF0149) SH02_RS13665 PF01066 CDP-alcohol phosphatidyltransferase SH02_RS13670 PF01541 GIY-YIG catalytic domain SH02_RS13670 PF08459 UvrC Helix-hairpin-helix N-terminal SH02_RS13670 PF02151 UvrB/uvrC motif SH02_RS13675 PF00196 Bacterial regulatory proteins, luxR family SH02_RS13675 PF00072 Response regulator receiver domain SH02_RS13685 PF10769 Protein of unknown function (DUF2594) SH02_RS13690 PF03472 Autoinducer binding domain SH02_RS13690 PF00196 Bacterial regulatory proteins, luxR family SH02_RS13695 PF00005 ABC transporter SH02_RS13700 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS13705 PF00291 Pyridoxal-phosphate dependent enzyme SH02_RS13710 PF00497 Bacterial extracellular solute-binding proteins, family 3 SH02_RS13715 PF02899 Phage integrase, N-terminal SAM-like domain SH02_RS13720 PF04539 Sigma-70 region 3 SH02_RS13720 PF04542 Sigma-70 region 2 SH02_RS13720 PF04545 Sigma-70, region 4 SH02_RS13725 PF08884 Flagellin D3 domain SH02_RS13725 PF00700 Bacterial flagellin C-terminal helical region SH02_RS13725 PF00669 Bacterial flagellin N-terminal helical region SH02_RS13730 PF07195 Flagellar hook-associated protein 2 C-terminus SH02_RS13730 PF02465 Flagellar hook-associated protein 2 N-terminus SH02_RS13735 PF02561 Flagellar protein FliS SH02_RS13740 PF05400 Flagellar protein FliT SH02_RS13745 PF02806 Alpha amylase, C-terminal all-beta domain SH02_RS13745 PF00128 Alpha amylase, catalytic domain SH02_RS13750 PF13987 YedD-like protein SH02_RS13755 PF04143 Sulphur transport SH02_RS13760 PF01206 Sulfurtransferase TusA SH02_RS13765 PF02586 SOS response associated peptidase (SRAP) SH02_RS13770 PF00583 Acetyltransferase (GNAT) family SH02_RS13790 PF02049 Flagellar hook-basal body complex protein FliE SH02_RS13795 PF08345 Flagellar M-ring protein C-terminal SH02_RS13795 PF01514 Secretory protein of YscJ/FliF family SH02_RS13800 PF14841 FliG middle domain SH02_RS13800 PF14842 FliG N-terminal domain SH02_RS13800 PF01706 FliG C-terminal domain SH02_RS13805 PF02108 Flagellar assembly protein FliH SH02_RS13810 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SH02_RS13810 PF18269 T3SS EscN ATPase C-terminal domain SH02_RS13815 PF02050 Flagellar FliJ protein SH02_RS13820 PF02120 Flagellar hook-length control protein FliK SH02_RS13825 PF03748 Flagellar basal body-associated protein FliL SH02_RS13830 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SH02_RS13830 PF02154 Flagellar motor switch protein FliM SH02_RS13835 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SH02_RS13835 PF16973 Flagellar motor switch protein FliN N-terminal SH02_RS13840 PF04347 Flagellar biosynthesis protein, FliO SH02_RS13845 PF00813 FliP family SH02_RS13850 PF01313 Bacterial export proteins, family 3 SH02_RS13855 PF01311 Bacterial export proteins, family 1 SH02_RS13860 PF00196 Bacterial regulatory proteins, luxR family SH02_RS13865 PF10781 Dextransucrase DSRB SH02_RS13870 PF10733 Protein of unknown function (DUF2525) SH02_RS13880 PF00990 Diguanylate cyclase, GGDEF domain SH02_RS13880 PF17151 Periplasmic sensor domain SH02_RS13885 PF09926 Uncharacterized small protein (DUF2158) SH02_RS13890 PF05661 Protein of unknown function (DUF808) SH02_RS13895 PF00892 EamA-like transporter family SH02_RS13900 PF03852 DNA mismatch endonuclease Vsr SH02_RS13905 PF18284 DNA methylase N-terminal domain SH02_RS13905 PF00145 C-5 cytosine-specific DNA methylase SH02_RS13910 PF01966 HD domain SH02_RS13940 PF00512 His Kinase A (phospho-acceptor) domain SH02_RS13940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SH02_RS13945 PF00486 Transcriptional regulatory protein, C terminal SH02_RS13945 PF00072 Response regulator receiver domain SH02_RS13950 PF00576 HIUase/Transthyretin family SH02_RS13955 PF00174 Oxidoreductase molybdopterin binding domain SH02_RS13960 PF01794 Ferric reductase like transmembrane component SH02_RS13965 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment SH02_RS13970 PF01292 Prokaryotic cytochrome b561 SH02_RS13985 PF06167 Glucose-regulated metallo-peptidase M90 SH02_RS13995 PF09134 Invasin, domain 3 SH02_RS13995 PF11924 Inverse autotransporter, beta-domain SH02_RS13995 PF02369 Bacterial Ig-like domain (group 1) SH02_RS14005 PF00083 Sugar (and other) transporter SH02_RS14005 PF07690 Major Facilitator Superfamily SH02_RS14010 PF01048 Phosphorylase superfamily SH02_RS14010 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus SH02_RS14015 PF01709 Transcriptional regulator SH02_RS14025 PF01554 MatE SH02_RS14035 PF03466 LysR substrate binding domain SH02_RS14035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS14040 PF03466 LysR substrate binding domain SH02_RS14040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS14050 PF17969 L,D-transpeptidase C-terminal domain SH02_RS14050 PF03734 L,D-transpeptidase catalytic domain SH02_RS14055 PF02277 Phosphoribosyltransferase SH02_RS14060 PF02654 Cobalamin-5-phosphate synthase SH02_RS14065 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase SH02_RS14075 PF05598 Transposase domain (DUF772) SH02_RS14075 PF01609 Transposase DDE domain SH02_RS14085 PF13276 HTH-like domain SH02_RS14085 PF00665 Integrase core domain SH02_RS14090 PF01527 Transposase SH02_RS14095 PF07715 TonB-dependent Receptor Plug Domain SH02_RS14095 PF00593 TonB dependent receptor SH02_RS14105 PF16168 Adhesin of bacterial autotransporter system, probable stalk SH02_RS14105 PF13018 Extended Signal Peptide of Type V secretion system SH02_RS14105 PF03797 Autotransporter beta-domain SH02_RS14115 PF04002 RadC-like JAB domain SH02_RS14120 PF06174 Protein of unknown function (DUF987) SH02_RS14125 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A SH02_RS14130 PF06755 CbtA_toxin of type IV toxin-antitoxin system SH02_RS14145 PF10662 Ethanolamine utilisation - propanediol utilisation SH02_RS14150 PF04363 Protein of unknown function (DUF496) SH02_RS14155 PF04632 Fusaric acid resistance protein family SH02_RS14160 PF06445 GyrI-like small molecule binding domain SH02_RS14165 PF00768 D-alanyl-D-alanine carboxypeptidase SH02_RS14165 PF07943 Penicillin-binding protein 5, C-terminal domain SH02_RS14170 PF00929 Exonuclease SH02_RS14170 PF08411 Exonuclease C-terminal SH02_RS14175 PF01206 Sulfurtransferase TusA SH02_RS14180 PF04143 Sulphur transport SH02_RS14185 PF13520 Amino acid permease SH02_RS14190 PF03466 LysR substrate binding domain SH02_RS14190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS14195 PF01370 NAD dependent epimerase/dehydratase family SH02_RS14200 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system SH02_RS14205 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system SH02_RS14210 PF08029 HisG, C-terminal domain SH02_RS14210 PF01634 ATP phosphoribosyltransferase SH02_RS14215 PF00815 Histidinol dehydrogenase SH02_RS14220 PF00155 Aminotransferase class I and II SH02_RS14225 PF00475 Imidazoleglycerol-phosphate dehydratase SH02_RS14225 PF08645 Polynucleotide kinase 3 phosphatase SH02_RS14230 PF00117 Glutamine amidotransferase class-I SH02_RS14235 PF00977 Histidine biosynthesis protein SH02_RS14240 PF00977 Histidine biosynthesis protein SH02_RS14245 PF01502 Phosphoribosyl-AMP cyclohydrolase SH02_RS14245 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase SH02_RS14250 PF02706 Chain length determinant protein SH02_RS14255 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SH02_RS14255 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SH02_RS14255 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SH02_RS14260 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SH02_RS14260 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain SH02_RS14265 PF05598 Transposase domain (DUF772) SH02_RS14265 PF01609 Transposase DDE domain SH02_RS14275 PF00534 Glycosyl transferases group 1 SH02_RS14280 PF00132 Bacterial transferase hexapeptide (six repeats) SH02_RS14295 PF03275 UDP-galactopyranose mutase SH02_RS14300 PF01943 Polysaccharide biosynthesis protein SH02_RS14305 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SH02_RS14310 PF00483 Nucleotidyl transferase SH02_RS14320 PF16363 GDP-mannose 4,6 dehydratase SH02_RS14325 PF00483 Nucleotidyl transferase SH02_RS14335 PF00534 Glycosyl transferases group 1 SH02_RS14335 PF13439 Glycosyltransferase Family 4 SH02_RS14340 PF04230 Polysaccharide pyruvyl transferase SH02_RS14350 PF02397 Bacterial sugar transferase SH02_RS14355 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SH02_RS14355 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SH02_RS14355 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SH02_RS14355 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SH02_RS14360 PF01050 Mannose-6-phosphate isomerase SH02_RS14360 PF00483 Nucleotidyl transferase SH02_RS14365 PF00534 Glycosyl transferases group 1 SH02_RS14365 PF13579 Glycosyl transferase 4-like domain SH02_RS14370 PF00293 NUDIX domain SH02_RS14375 PF01370 NAD dependent epimerase/dehydratase family SH02_RS14380 PF16363 GDP-mannose 4,6 dehydratase SH02_RS14385 PF00132 Bacterial transferase hexapeptide (six repeats) SH02_RS14390 PF00535 Glycosyl transferase family 2 SH02_RS14400 PF13439 Glycosyltransferase Family 4 SH02_RS14400 PF00534 Glycosyl transferases group 1 SH02_RS14405 PF00132 Bacterial transferase hexapeptide (six repeats) SH02_RS14410 PF00535 Glycosyl transferase family 2 SH02_RS14415 PF02706 Chain length determinant protein SH02_RS14415 PF13807 G-rich domain on putative tyrosine kinase SH02_RS14415 PF13614 AAA domain SH02_RS14420 PF01451 Low molecular weight phosphotyrosine protein phosphatase SH02_RS14425 PF18412 Outer-membrane lipoprotein Wza C-terminal domain SH02_RS14425 PF10531 SLBB domain SH02_RS14425 PF02563 Polysaccharide biosynthesis/export protein SH02_RS14430 PF03471 Transporter associated domain SH02_RS14430 PF00571 CBS domain SH02_RS14430 PF03741 Integral membrane protein TerC family SH02_RS14435 PF05170 AsmA family SH02_RS14440 PF00692 dUTPase SH02_RS14445 PF00485 Phosphoribulokinase / Uridine kinase family SH02_RS14450 PF13426 PAS domain SH02_RS14450 PF08447 PAS fold SH02_RS14450 PF05231 MASE1 SH02_RS14450 PF00990 Diguanylate cyclase, GGDEF domain SH02_RS14450 PF00563 EAL domain SH02_RS14450 PF08448 PAS fold SH02_RS14455 PF00730 HhH-GPD superfamily base excision DNA repair protein SH02_RS14455 PF06029 AlkA N-terminal domain SH02_RS14465 PF00012 Hsp70 protein SH02_RS14475 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) SH02_RS14485 PF00092 von Willebrand factor type A domain SH02_RS14490 PF13533 Biotin-lipoyl like SH02_RS14495 PF00873 AcrB/AcrD/AcrF family SH02_RS14500 PF00873 AcrB/AcrD/AcrF family SH02_RS14505 PF07690 Major Facilitator Superfamily SH02_RS14510 PF00672 HAMP domain SH02_RS14510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SH02_RS14510 PF00512 His Kinase A (phospho-acceptor) domain SH02_RS14515 PF00072 Response regulator receiver domain SH02_RS14515 PF00486 Transcriptional regulatory protein, C terminal SH02_RS14520 PF07411 Domain of unknown function (DUF1508) SH02_RS14525 PF16325 Peptidase family U32 C-terminal domain SH02_RS14525 PF01136 Peptidase family U32 SH02_RS14545 PF00781 Diacylglycerol kinase catalytic domain SH02_RS14555 PF01527 Transposase SH02_RS14560 PF13276 HTH-like domain SH02_RS14560 PF13333 Integrase core domain SH02_RS14560 PF00665 Integrase core domain SH02_RS14565 PF08220 DeoR-like helix-turn-helix domain SH02_RS14570 PF08240 Alcohol dehydrogenase GroES-like domain SH02_RS14570 PF00107 Zinc-binding dehydrogenase SH02_RS14575 PF03611 PTS system sugar-specific permease component SH02_RS14580 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SH02_RS14585 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SH02_RS14590 PF08013 Tagatose 6 phosphate kinase SH02_RS14595 PF01116 Fructose-bisphosphate aldolase class-II SH02_RS14600 PF01791 DeoC/LacD family aldolase SH02_RS14605 PF03825 Nucleoside H+ symporter SH02_RS14610 PF03747 ADP-ribosylglycohydrolase SH02_RS14615 PF00294 pfkB family carbohydrate kinase SH02_RS14620 PF07702 UTRA domain SH02_RS14620 PF00392 Bacterial regulatory proteins, gntR family SH02_RS14625 PF01183 Glycosyl hydrolases family 25 SH02_RS14630 PF08543 Phosphomethylpyrimidine kinase SH02_RS14635 PF02110 Hydroxyethylthiazole kinase family SH02_RS14640 PF02583 Metal-sensitive transcriptional repressor SH02_RS14645 PF03824 High-affinity nickel-transport protein SH02_RS14650 PF11776 Nickel/cobalt transporter regulator SH02_RS14655 PF00419 Fimbrial protein SH02_RS14660 PF13953 PapC C-terminal domain SH02_RS14660 PF13954 PapC N-terminal domain SH02_RS14660 PF00577 Outer membrane usher protein SH02_RS14665 PF02753 Pili assembly chaperone PapD, C-terminal domain SH02_RS14665 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SH02_RS14670 PF00419 Fimbrial protein SH02_RS14680 PF10836 Protein of unknown function (DUF2574) SH02_RS14685 PF10609 NUBPL iron-transfer P-loop NTPase SH02_RS14690 PF09334 tRNA synthetases class I (M) SH02_RS14690 PF01588 Putative tRNA binding domain SH02_RS14695 PF05406 WGR domain SH02_RS14705 PF13569 Domain of unknown function (DUF4132) SH02_RS14715 PF07728 AAA domain (dynein-related subfamily) SH02_RS14725 PF05762 VWA domain containing CoxE-like protein SH02_RS14730 PF04434 SWIM zinc finger SH02_RS14735 PF06998 Protein of unknown function (DUF1307) SH02_RS14740 PF07308 Protein of unknown function (DUF1456) SH02_RS14745 PF04397 LytTr DNA-binding domain SH02_RS14745 PF00072 Response regulator receiver domain SH02_RS14750 PF06580 Histidine kinase SH02_RS14750 PF07694 5TMR of 5TMR-LYT SH02_RS14755 PF13411 MerR HTH family regulatory protein SH02_RS14765 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS14770 PF00005 ABC transporter SH02_RS14775 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS14780 PF04069 Substrate binding domain of ABC-type glycine betaine transport system SH02_RS14785 PF14310 Fibronectin type III-like domain SH02_RS14785 PF01915 Glycosyl hydrolase family 3 C-terminal domain SH02_RS14785 PF00933 Glycosyl hydrolase family 3 N terminal domain SH02_RS14790 PF09330 D-lactate dehydrogenase, membrane binding SH02_RS14790 PF01565 FAD binding domain SH02_RS14795 PF00768 D-alanyl-D-alanine carboxypeptidase SH02_RS14800 PF04893 Yip1 domain SH02_RS14805 PF09335 SNARE associated Golgi protein SH02_RS14825 PF01207 Dihydrouridine synthase (Dus) SH02_RS14830 PF03788 LrgA family SH02_RS14835 PF04172 LrgB-like family SH02_RS14840 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SH02_RS14840 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region SH02_RS14845 PF02698 DUF218 domain SH02_RS14850 PF10808 Protein of unknown function (DUF2542) SH02_RS14855 PF07992 Pyridine nucleotide-disulphide oxidoreductase SH02_RS14855 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SH02_RS14860 PF01180 Dihydroorotate dehydrogenase SH02_RS14865 PF02653 Branched-chain amino acid transport system / permease component SH02_RS14870 PF03400 IS1 transposase SH02_RS14880 PF13407 Periplasmic binding protein domain SH02_RS14885 PF00356 Bacterial regulatory proteins, lacI family SH02_RS14895 PF04235 Protein of unknown function (DUF418) SH02_RS14900 PF01227 GTP cyclohydrolase I SH02_RS14910 PF00756 Putative esterase SH02_RS14915 PF07715 TonB-dependent Receptor Plug Domain SH02_RS14915 PF00593 TonB dependent receptor SH02_RS14920 PF00324 Amino acid permease SH02_RS14925 PF03466 LysR substrate binding domain SH02_RS14925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS14930 PF03601 Conserved hypothetical protein 698 SH02_RS14935 PF01261 Xylose isomerase-like TIM barrel SH02_RS14940 PF00294 pfkB family carbohydrate kinase SH02_RS14945 PF07662 Na+ dependent nucleoside transporter C-terminus SH02_RS14945 PF01773 Na+ dependent nucleoside transporter N-terminus SH02_RS14950 PF01156 Inosine-uridine preferring nucleoside hydrolase SH02_RS14955 PF00027 Cyclic nucleotide-binding domain SH02_RS14960 PF07662 Na+ dependent nucleoside transporter C-terminus SH02_RS14960 PF01773 Na+ dependent nucleoside transporter N-terminus SH02_RS14965 PF04227 Indigoidine synthase A like protein SH02_RS14970 PF00294 pfkB family carbohydrate kinase SH02_RS14975 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SH02_RS14975 PF02378 Phosphotransferase system, EIIC SH02_RS14980 PF00294 pfkB family carbohydrate kinase SH02_RS14985 PF00381 PTS HPr component phosphorylation site SH02_RS14985 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SH02_RS14990 PF07690 Major Facilitator Superfamily SH02_RS14995 PF03692 Putative zinc- or iron-chelating domain SH02_RS15000 PF01132 Elongation factor P (EF-P) OB domain SH02_RS15000 PF08207 Elongation factor P (EF-P) KOW-like domain SH02_RS15000 PF09285 Elongation factor P, C-terminal SH02_RS15005 PF01232 Mannitol dehydrogenase Rossmann domain SH02_RS15005 PF08125 Mannitol dehydrogenase C-terminal domain SH02_RS15010 PF02492 CobW/HypB/UreG, nucleotide-binding domain SH02_RS15010 PF07683 Cobalamin synthesis protein cobW C-terminal domain SH02_RS15015 PF01569 PAP2 superfamily SH02_RS15020 PF00877 NlpC/P60 family SH02_RS15025 PF00563 EAL domain SH02_RS15025 PF12792 CSS motif domain associated with EAL SH02_RS15030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SH02_RS15035 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS15040 PF12911 N-terminal TM domain of oligopeptide transport permease C SH02_RS15040 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS15045 PF00005 ABC transporter SH02_RS15045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SH02_RS15050 PF13989 YejG-like protein SH02_RS15055 PF07690 Major Facilitator Superfamily SH02_RS15060 PF00849 RNA pseudouridylate synthase SH02_RS15060 PF01479 S4 domain SH02_RS15065 PF00271 Helicase conserved C-terminal domain SH02_RS15065 PF04851 Type III restriction enzyme, res subunit SH02_RS15070 PF01386 Ribosomal L25p family SH02_RS15075 PF04245 37-kD nucleoid-associated bacterial protein SH02_RS15080 PF07208 Protein of unknown function (DUF1414) SH02_RS15085 PF00884 Sulfatase SH02_RS15085 PF11893 Domain of unknown function (DUF3413) SH02_RS15095 PF16168 Adhesin of bacterial autotransporter system, probable stalk SH02_RS15095 PF03797 Autotransporter beta-domain SH02_RS15095 PF03212 Pertactin SH02_RS15100 PF05598 Transposase domain (DUF772) SH02_RS15100 PF01609 Transposase DDE domain SH02_RS15110 PF00196 Bacterial regulatory proteins, luxR family SH02_RS15110 PF00072 Response regulator receiver domain SH02_RS15115 PF03918 Cytochrome C biogenesis protein SH02_RS15120 PF08534 Redoxin SH02_RS15125 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal SH02_RS15125 PF01578 Cytochrome C assembly protein SH02_RS15130 PF03100 CcmE SH02_RS15135 PF04995 Heme exporter protein D (CcmD) SH02_RS15140 PF01578 Cytochrome C assembly protein SH02_RS15145 PF03379 CcmB protein SH02_RS15150 PF00005 ABC transporter SH02_RS15155 PF03264 NapC/NirT cytochrome c family, N-terminal region SH02_RS15160 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) SH02_RS15165 PF12801 4Fe-4S binding domain SH02_RS15165 PF13237 4Fe-4S dicluster domain SH02_RS15170 PF12800 4Fe-4S binding domain SH02_RS15170 PF12838 4Fe-4S dicluster domain SH02_RS15175 PF01568 Molydopterin dinucleotide binding domain SH02_RS15175 PF00384 Molybdopterin oxidoreductase SH02_RS15175 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SH02_RS15180 PF03927 NapD protein SH02_RS15185 PF12800 4Fe-4S binding domain SH02_RS15185 PF00037 4Fe-4S binding domain SH02_RS15185 PF13187 4Fe-4S dicluster domain SH02_RS15195 PF03974 Ecotin SH02_RS15200 PF06039 Malate:quinone oxidoreductase (Mqo) SH02_RS15205 PF00005 ABC transporter SH02_RS15210 PF13532 2OG-Fe(II) oxygenase superfamily SH02_RS15215 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SH02_RS15215 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SH02_RS15215 PF02805 Metal binding domain of Ada SH02_RS15215 PF12833 Helix-turn-helix domain SH02_RS15220 PF02424 ApbE family SH02_RS15225 PF00267 Gram-negative porin SH02_RS15240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SH02_RS15240 PF16359 RcsD-ABL domain SH02_RS15240 PF01627 Hpt domain SH02_RS15245 PF00072 Response regulator receiver domain SH02_RS15245 PF00196 Bacterial regulatory proteins, luxR family SH02_RS15250 PF09456 RcsC Alpha-Beta-Loop (ABL) SH02_RS15250 PF00512 His Kinase A (phospho-acceptor) domain SH02_RS15250 PF00072 Response regulator receiver domain SH02_RS15250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SH02_RS15255 PF00989 PAS fold SH02_RS15255 PF00512 His Kinase A (phospho-acceptor) domain SH02_RS15255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SH02_RS15260 PF00072 Response regulator receiver domain SH02_RS15260 PF00158 Sigma-54 interaction domain SH02_RS15260 PF02954 Bacterial regulatory protein, Fis family SH02_RS15265 PF01144 Coenzyme A transferase SH02_RS15270 PF01144 Coenzyme A transferase SH02_RS15275 PF02667 Short chain fatty acid transporter SH02_RS15280 PF00108 Thiolase, N-terminal domain SH02_RS15280 PF02803 Thiolase, C-terminal domain SH02_RS15285 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) SH02_RS15290 PF08486 Stage II sporulation protein SH02_RS15290 PF10062 Predicted secreted protein (DUF2300) SH02_RS15295 PF00207 Alpha-2-macroglobulin family SH02_RS15295 PF07703 Alpha-2-macroglobulin bait region domain SH02_RS15295 PF01835 MG2 domain SH02_RS15300 PF07703 Alpha-2-macroglobulin bait region domain SH02_RS15300 PF00207 Alpha-2-macroglobulin family SH02_RS15300 PF01835 MG2 domain SH02_RS15305 PF06672 Protein of unknown function (DUF1175) SH02_RS15310 PF09909 Uncharacterized protein conserved in bacteria (DUF2138) SH02_RS15315 PF03989 DNA gyrase C-terminal domain, beta-propeller SH02_RS15315 PF00521 DNA gyrase/topoisomerase IV, subunit A SH02_RS15325 PF12951 Passenger-associated-transport-repeat SH02_RS15325 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat SH02_RS15325 PF03797 Autotransporter beta-domain SH02_RS15335 PF03477 ATP cone domain SH02_RS15335 PF00317 Ribonucleotide reductase, all-alpha domain SH02_RS15335 PF02867 Ribonucleotide reductase, barrel domain SH02_RS15340 PF00268 Ribonucleotide reductase, small chain SH02_RS15345 PF00111 2Fe-2S iron-sulfur cluster binding domain SH02_RS15360 PF03009 Glycerophosphoryl diester phosphodiesterase family SH02_RS15365 PF07690 Major Facilitator Superfamily SH02_RS15370 PF01266 FAD dependent oxidoreductase SH02_RS15370 PF04324 BFD-like [2Fe-2S] binding domain SH02_RS15375 PF00890 FAD binding domain SH02_RS15380 PF13183 4Fe-4S dicluster domain SH02_RS15380 PF02754 Cysteine-rich domain SH02_RS15385 PF04754 Putative transposase, YhgA-like SH02_RS15395 PF03328 HpcH/HpaI aldolase/citrate lyase family SH02_RS15400 PF07690 Major Facilitator Superfamily SH02_RS15410 PF09339 IclR helix-turn-helix domain SH02_RS15410 PF01614 Bacterial transcriptional regulator SH02_RS15415 PF00994 Probable molybdopterin binding domain SH02_RS15420 PF07437 YfaZ precursor SH02_RS15425 PF00293 NUDIX domain SH02_RS15430 PF00300 Histidine phosphatase superfamily (branch 1) SH02_RS15435 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SH02_RS15440 PF00535 Glycosyl transferase family 2 SH02_RS15445 PF01370 NAD dependent epimerase/dehydratase family SH02_RS15445 PF02911 Formyl transferase, C-terminal domain SH02_RS15445 PF00551 Formyl transferase SH02_RS15450 PF01522 Polysaccharide deacetylase SH02_RS15455 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase SH02_RS15460 PF00892 EamA-like transporter family SH02_RS15475 PF13193 AMP-binding enzyme C-terminal domain SH02_RS15475 PF00501 AMP-binding enzyme SH02_RS15480 PF13378 Enolase C-terminal domain-like SH02_RS15485 PF00378 Enoyl-CoA hydratase/isomerase SH02_RS15490 PF12697 Alpha/beta hydrolase family SH02_RS15495 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SH02_RS15495 PF16582 Middle domain of thiamine pyrophosphate SH02_RS15495 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SH02_RS15500 PF00425 chorismate binding enzyme SH02_RS15505 PF05957 Bacterial protein of unknown function (DUF883) SH02_RS15510 PF13673 Acetyltransferase (GNAT) domain SH02_RS15515 PF12706 Beta-lactamase superfamily domain SH02_RS15520 PF02902 Ulp1 protease family, C-terminal catalytic domain SH02_RS15525 PF12034 Domain of unknown function (DUF3520) SH02_RS15525 PF12450 von Willebrand factor SH02_RS15525 PF00092 von Willebrand factor type A domain SH02_RS15530 PF04389 Peptidase family M28 SH02_RS15535 PF08974 Domain of unknown function (DUF1877) SH02_RS15555 PF00361 Proton-conducting membrane transporter SH02_RS15560 PF00361 Proton-conducting membrane transporter SH02_RS15565 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SH02_RS15565 PF00361 Proton-conducting membrane transporter SH02_RS15570 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L SH02_RS15575 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 SH02_RS15580 PF12838 4Fe-4S dicluster domain SH02_RS15585 PF00146 NADH dehydrogenase SH02_RS15590 PF00384 Molybdopterin oxidoreductase SH02_RS15590 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SH02_RS15590 PF01568 Molydopterin dinucleotide binding domain SH02_RS15590 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SH02_RS15595 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SH02_RS15595 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit SH02_RS15595 PF10531 SLBB domain SH02_RS15605 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit SH02_RS15605 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit SH02_RS15610 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SH02_RS15615 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 SH02_RS15620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS15620 PF03466 LysR substrate binding domain SH02_RS15625 PF00155 Aminotransferase class I and II SH02_RS15635 PF03600 Citrate transporter SH02_RS15635 PF02080 TrkA-C domain SH02_RS15640 PF13419 Haloacid dehalogenase-like hydrolase SH02_RS15645 PF03887 YfbU domain SH02_RS15650 PF04217 Protein of unknown function, DUF412 SH02_RS15660 PF00871 Acetokinase family SH02_RS15665 PF01515 Phosphate acetyl/butaryl transferase SH02_RS15665 PF07085 DRTGG domain SH02_RS15670 PF03606 C4-dicarboxylate anaerobic carrier SH02_RS15675 PF00293 NUDIX domain SH02_RS15680 PF12850 Calcineurin-like phosphoesterase superfamily domain SH02_RS15685 PF14834 Glutathione S-transferase, C-terminal domain SH02_RS15685 PF02798 Glutathione S-transferase, N-terminal domain SH02_RS15690 PF02798 Glutathione S-transferase, N-terminal domain SH02_RS15690 PF00043 Glutathione S-transferase, C-terminal domain SH02_RS15695 PF02152 Dihydroneopterin aldolase SH02_RS15700 PF08338 Domain of unknown function (DUF1731) SH02_RS15700 PF01370 NAD dependent epimerase/dehydratase family SH02_RS15705 PF04754 Putative transposase, YhgA-like SH02_RS15710 PF00005 ABC transporter SH02_RS15715 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS15720 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS15725 PF00497 Bacterial extracellular solute-binding proteins, family 3 SH02_RS15730 PF00497 Bacterial extracellular solute-binding proteins, family 3 SH02_RS15735 PF02441 Flavoprotein SH02_RS15740 PF00156 Phosphoribosyl transferase domain SH02_RS15745 PF02674 Colicin V production protein SH02_RS15750 PF05036 Sporulation related domain SH02_RS15755 PF02875 Mur ligase family, glutamate ligase domain SH02_RS15755 PF08245 Mur ligase middle domain SH02_RS15760 PF17848 Acetyl-coA carboxylase zinc finger domain SH02_RS15760 PF01039 Carboxyl transferase domain SH02_RS15765 PF09335 SNARE associated Golgi protein SH02_RS15770 PF01416 tRNA pseudouridine synthase SH02_RS15775 PF02774 Semialdehyde dehydrogenase, dimerisation domain SH02_RS15775 PF01118 Semialdehyde dehydrogenase, NAD binding domain SH02_RS15780 PF11890 Domain of unknown function (DUF3410) SH02_RS15780 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SH02_RS15780 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SH02_RS15790 PF07690 Major Facilitator Superfamily SH02_RS15795 PF02801 Beta-ketoacyl synthase, C-terminal domain SH02_RS15795 PF00109 Beta-ketoacyl synthase, N-terminal domain SH02_RS15800 PF01266 FAD dependent oxidoreductase SH02_RS15800 PF05430 S-adenosyl-L-methionine-dependent methyltransferase SH02_RS15805 PF08891 YfcL protein SH02_RS15810 PF04315 Elongation factor P hydroxylase SH02_RS15815 PF01925 Sulfite exporter TauE/SafE SH02_RS15820 PF03411 Penicillin-insensitive murein endopeptidase SH02_RS15825 PF01264 Chorismate synthase SH02_RS15830 PF05175 Methyltransferase small domain SH02_RS15835 PF01713 Smr domain SH02_RS15840 PF11245 Protein of unknown function (DUF2544) SH02_RS15845 PF00419 Fimbrial protein SH02_RS15850 PF00419 Fimbrial protein SH02_RS15855 PF00419 Fimbrial protein SH02_RS15860 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SH02_RS15860 PF02753 Pili assembly chaperone PapD, C-terminal domain SH02_RS15870 PF00419 Fimbrial protein SH02_RS15875 PF00300 Histidine phosphatase superfamily (branch 1) SH02_RS15880 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SH02_RS15880 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SH02_RS15880 PF00378 Enoyl-CoA hydratase/isomerase SH02_RS15885 PF02803 Thiolase, C-terminal domain SH02_RS15885 PF00108 Thiolase, N-terminal domain SH02_RS15890 PF04175 Protein of unknown function (DUF406) SH02_RS15895 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) SH02_RS15905 PF04333 MlaA lipoprotein SH02_RS15910 PF01226 Formate/nitrite transporter SH02_RS15920 PF14659 Phage integrase, N-terminal SAM-like domain SH02_RS15920 PF00589 Phage integrase family SH02_RS15920 PF13356 Arm DNA-binding domain SH02_RS15925 PF04138 GtrA-like protein SH02_RS15930 PF00535 Glycosyl transferase family 2 SH02_RS15940 PF02413 Caudovirales tail fibre assembly protein, lambda gpK SH02_RS15945 PF02413 Caudovirales tail fibre assembly protein, lambda gpK SH02_RS15955 PF05869 DNA N-6-adenine-methyltransferase (Dam) SH02_RS15960 PF06069 PerC transcriptional activator SH02_RS15980 PF10065 Uncharacterized conserved protein (DUF2303) SH02_RS16005 PF03466 LysR substrate binding domain SH02_RS16005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS16010 PF02447 GntP family permease SH02_RS16015 PF00291 Pyridoxal-phosphate dependent enzyme SH02_RS16020 PF07690 Major Facilitator Superfamily SH02_RS16025 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SH02_RS16025 PF00529 HlyD membrane-fusion protein of T1SS SH02_RS16030 PF00196 Bacterial regulatory proteins, luxR family SH02_RS16030 PF00072 Response regulator receiver domain SH02_RS16035 PF00072 Response regulator receiver domain SH02_RS16035 PF01627 Hpt domain SH02_RS16035 PF00512 His Kinase A (phospho-acceptor) domain SH02_RS16035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SH02_RS16035 PF00497 Bacterial extracellular solute-binding proteins, family 3 SH02_RS16040 PF02515 CoA-transferase family III SH02_RS16045 PF03547 Membrane transport protein SH02_RS16050 PF00205 Thiamine pyrophosphate enzyme, central domain SH02_RS16050 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SH02_RS16050 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SH02_RS16055 PF02515 CoA-transferase family III SH02_RS16060 PF10938 YfdX protein SH02_RS16075 PF10810 Protein of unknown function (DUF2545) SH02_RS16080 PF03279 Bacterial lipid A biosynthesis acyltransferase SH02_RS16085 PF00155 Aminotransferase class I and II SH02_RS16090 PF06580 Histidine kinase SH02_RS16090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SH02_RS16090 PF07694 5TMR of 5TMR-LYT SH02_RS16095 PF04397 LytTr DNA-binding domain SH02_RS16095 PF00072 Response regulator receiver domain SH02_RS16100 PF12833 Helix-turn-helix domain SH02_RS16105 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SH02_RS16105 PF00381 PTS HPr component phosphorylation site SH02_RS16105 PF02896 PEP-utilising enzyme, TIM barrel domain SH02_RS16105 PF05524 PEP-utilising enzyme, N-terminal SH02_RS16105 PF00391 PEP-utilising enzyme, mobile domain SH02_RS16110 PF05343 M42 glutamyl aminopeptidase SH02_RS16115 PF01321 Creatinase/Prolidase N-terminal domain SH02_RS16115 PF00557 Metallopeptidase family M24 SH02_RS16120 PF02378 Phosphotransferase system, EIIC SH02_RS16125 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SH02_RS16130 PF02685 Glucokinase SH02_RS16135 PF00654 Voltage gated chloride channel SH02_RS16140 PF10697 Protein of unknown function (DUF2502) SH02_RS16150 PF01566 Natural resistance-associated macrophage protein SH02_RS16155 PF07662 Na+ dependent nucleoside transporter C-terminus SH02_RS16155 PF07670 Nucleoside recognition SH02_RS16155 PF01773 Na+ dependent nucleoside transporter N-terminus SH02_RS16160 PF01609 Transposase DDE domain SH02_RS16165 PF05231 MASE1 SH02_RS16165 PF00563 EAL domain SH02_RS16180 PF07037 Putative transcription regulator (DUF1323) SH02_RS16185 PF07037 Putative transcription regulator (DUF1323) SH02_RS16190 PF00749 tRNA synthetases class I (E and Q), catalytic domain SH02_RS16215 PF03466 LysR substrate binding domain SH02_RS16215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS16225 PF03825 Nucleoside H+ symporter SH02_RS16230 PF01048 Phosphorylase superfamily SH02_RS16235 PF03502 Nucleoside-specific channel-forming protein, Tsx SH02_RS16240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS16240 PF03466 LysR substrate binding domain SH02_RS16245 PF13593 SBF-like CPA transporter family (DUF4137) SH02_RS16250 PF12843 Putative quorum-sensing-regulated virulence factor SH02_RS16255 PF01653 NAD-dependent DNA ligase adenylation domain SH02_RS16255 PF00533 BRCA1 C Terminus (BRCT) domain SH02_RS16255 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SH02_RS16255 PF03120 NAD-dependent DNA ligase OB-fold domain SH02_RS16255 PF12826 Helix-hairpin-helix motif SH02_RS16260 PF04354 ZipA, C-terminal FtsZ-binding domain SH02_RS16270 PF00291 Pyridoxal-phosphate dependent enzyme SH02_RS16275 PF00381 PTS HPr component phosphorylation site SH02_RS16280 PF05524 PEP-utilising enzyme, N-terminal SH02_RS16280 PF02896 PEP-utilising enzyme, TIM barrel domain SH02_RS16280 PF00391 PEP-utilising enzyme, mobile domain SH02_RS16285 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SH02_RS16290 PF08543 Phosphomethylpyrimidine kinase SH02_RS16295 PF17263 Family of unknown function (DUF5329) SH02_RS16300 PF05406 WGR domain SH02_RS16305 PF00291 Pyridoxal-phosphate dependent enzyme SH02_RS16310 PF00005 ABC transporter SH02_RS16315 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS16320 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS16335 PF01380 SIS domain SH02_RS16335 PF01418 Helix-turn-helix domain, rpiR family SH02_RS16340 PF01380 SIS domain SH02_RS16345 PF00367 phosphotransferase system, EIIB SH02_RS16345 PF02378 Phosphotransferase system, EIIC SH02_RS16350 PF00144 Beta-lactamase SH02_RS16355 PF04261 Dyp-type peroxidase family SH02_RS16360 PF06572 Protein of unknown function (DUF1131) SH02_RS16365 PF11143 Protein of unknown function (DUF2919) SH02_RS16370 PF00583 Acetyltransferase (GNAT) family SH02_RS16375 PF01520 N-acetylmuramoyl-L-alanine amidase SH02_RS16380 PF01218 Coproporphyrinogen III oxidase SH02_RS16385 PF12833 Helix-turn-helix domain SH02_RS16390 PF16365 Ethanolamine utilization protein EutK C-terminus SH02_RS16390 PF00936 BMC domain SH02_RS16395 PF00936 BMC domain SH02_RS16400 PF05985 Ethanolamine ammonia-lyase light chain (EutC) SH02_RS16405 PF06751 Ethanolamine ammonia lyase large subunit (EutB) SH02_RS16410 PF06277 Ethanolamine utilisation protein EutA SH02_RS16415 PF04346 Ethanolamine utilisation protein, EutH SH02_RS16420 PF00465 Iron-containing alcohol dehydrogenase SH02_RS16430 PF00171 Aldehyde dehydrogenase family SH02_RS16435 PF03319 Ethanolamine utilisation protein EutN/carboxysome SH02_RS16440 PF00936 BMC domain SH02_RS16445 PF01515 Phosphate acetyl/butaryl transferase SH02_RS16450 PF01923 Cobalamin adenosyltransferase SH02_RS16455 PF06249 Ethanolamine utilisation protein EutQ SH02_RS16460 PF10662 Ethanolamine utilisation - propanediol utilisation SH02_RS16465 PF00936 BMC domain SH02_RS16470 PF01515 Phosphate acetyl/butaryl transferase SH02_RS16470 PF03949 Malic enzyme, NAD binding domain SH02_RS16470 PF00390 Malic enzyme, N-terminal domain SH02_RS16475 PF00923 Transaldolase/Fructose-6-phosphate aldolase SH02_RS16480 PF02780 Transketolase, C-terminal domain SH02_RS16480 PF02779 Transketolase, pyrimidine binding domain SH02_RS16480 PF00456 Transketolase, thiamine diphosphate binding domain SH02_RS16485 PF06674 Protein of unknown function (DUF1176) SH02_RS16490 PF00293 NUDIX domain SH02_RS16495 PF13247 4Fe-4S dicluster domain SH02_RS16495 PF07992 Pyridine nucleotide-disulphide oxidoreductase SH02_RS16495 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SH02_RS16500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SH02_RS16500 PF00672 HAMP domain SH02_RS16500 PF07730 Histidine kinase SH02_RS16500 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term SH02_RS16505 PF00873 AcrB/AcrD/AcrF family SH02_RS16515 PF03960 ArsC family SH02_RS16520 PF01546 Peptidase family M20/M25/M40 SH02_RS16520 PF07687 Peptidase dimerisation domain SH02_RS16525 PF13980 Uncharacterised protein family (UPF0370) SH02_RS16530 PF02230 Phospholipase/Carboxylesterase SH02_RS16535 PF17176 tRNA-binding domain SH02_RS16535 PF05127 Helicase SH02_RS16535 PF13718 GNAT acetyltransferase 2 SH02_RS16535 PF08351 Domain of unknown function (DUF1726) SH02_RS16540 PF04228 Putative neutral zinc metallopeptidase SH02_RS16545 PF01259 SAICAR synthetase SH02_RS16555 PF06804 NlpB/DapX lipoprotein SH02_RS16560 PF00701 Dihydrodipicolinate synthetase family SH02_RS16565 PF01842 ACT domain SH02_RS16570 PF00578 AhpC/TSA family SH02_RS16575 PF00037 4Fe-4S binding domain SH02_RS16575 PF12798 4Fe-4S binding domain SH02_RS16580 PF00361 Proton-conducting membrane transporter SH02_RS16585 PF00146 NADH dehydrogenase SH02_RS16590 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SH02_RS16590 PF00361 Proton-conducting membrane transporter SH02_RS16595 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L SH02_RS16600 PF00361 Proton-conducting membrane transporter SH02_RS16600 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SH02_RS16605 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit SH02_RS16605 PF00374 Nickel-dependent hydrogenase SH02_RS16605 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit SH02_RS16610 PF12838 4Fe-4S dicluster domain SH02_RS16615 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SH02_RS16620 PF07450 Formate hydrogenlyase maturation protein HycH SH02_RS16625 PF00158 Sigma-54 interaction domain SH02_RS16625 PF01590 GAF domain SH02_RS16630 PF01226 Formate/nitrite transporter SH02_RS16635 PF01594 AI-2E family transporter SH02_RS16640 PF01435 Peptidase family M48 SH02_RS16645 PF03960 ArsC family SH02_RS16650 PF00308 Bacterial dnaA protein SH02_RS16655 PF00860 Permease family SH02_RS16665 PF02769 AIR synthase related protein, C-terminal domain SH02_RS16665 PF00586 AIR synthase related protein, N-terminal domain SH02_RS16670 PF00551 Formyl transferase SH02_RS16675 PF13090 Polyphosphate kinase C-terminal domain 2 SH02_RS16675 PF02503 Polyphosphate kinase middle domain SH02_RS16675 PF17941 Polyphosphate kinase C-terminal domain 1 SH02_RS16675 PF13089 Polyphosphate kinase N-terminal domain SH02_RS16680 PF02541 Ppx/GppA phosphatase family SH02_RS16685 PF05231 MASE1 SH02_RS16685 PF00563 EAL domain SH02_RS16695 PF11119 Protein of unknown function (DUF2633) SH02_RS16700 PF05433 Glycine zipper 2TM domain SH02_RS16705 PF17358 Family of unknown function (DUF5384) SH02_RS16710 PF02540 NAD synthase SH02_RS16710 PF00958 GMP synthase C terminal domain SH02_RS16710 PF00117 Glutamine amidotransferase class-I SH02_RS16715 PF00571 CBS domain SH02_RS16715 PF00478 IMP dehydrogenase / GMP reductase domain SH02_RS16720 PF02601 Exonuclease VII, large subunit SH02_RS16720 PF13742 OB-fold nucleic acid binding domain SH02_RS16725 PF07191 zinc-ribbons SH02_RS16730 PF01926 50S ribosome-binding GTPase SH02_RS16730 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SH02_RS16735 PF13360 PQQ-like domain SH02_RS16740 PF09976 Tetratricopeptide repeat-like domain SH02_RS16745 PF13393 Histidyl-tRNA synthetase SH02_RS16745 PF03129 Anticodon binding domain SH02_RS16750 PF04551 GcpE protein SH02_RS16755 PF13464 Domain of unknown function (DUF4115) SH02_RS16760 PF04055 Radical SAM superfamily SH02_RS16765 PF00334 Nucleoside diphosphate kinase SH02_RS16770 PF00912 Transglycosylase SH02_RS16770 PF06832 Penicillin-Binding Protein C-terminus Family SH02_RS16770 PF00905 Penicillin binding protein transpeptidase domain SH02_RS16775 PF00207 Alpha-2-macroglobulin family SH02_RS16775 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain SH02_RS16775 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain SH02_RS16775 PF11974 Bacterial alpha-2-macroglobulin MG3 domain SH02_RS16775 PF07678 A-macroglobulin TED domain SH02_RS16775 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain SH02_RS16775 PF17962 Bacterial macroglobulin domain 6 SH02_RS16775 PF01835 MG2 domain SH02_RS16775 PF07703 Alpha-2-macroglobulin bait region domain SH02_RS16780 PF00581 Rhodanese-like domain SH02_RS16785 PF07179 SseB protein N-terminal domain SH02_RS16785 PF14581 SseB protein C-terminal domain SH02_RS16790 PF12404 Peptidase SH02_RS16790 PF00883 Cytosol aminopeptidase family, catalytic domain SH02_RS16795 PF04384 Iron-sulphur cluster assembly SH02_RS16800 PF00111 2Fe-2S iron-sulfur cluster binding domain SH02_RS16805 PF00012 Hsp70 protein SH02_RS16810 PF07743 HSCB C-terminal oligomerisation domain SH02_RS16815 PF01521 Iron-sulphur cluster biosynthesis SH02_RS16820 PF01592 NifU-like N terminal domain SH02_RS16825 PF00266 Aminotransferase class-V SH02_RS16830 PF02082 Transcriptional regulator SH02_RS16835 PF00588 SpoU rRNA Methylase family SH02_RS16840 PF00459 Inositol monophosphatase family SH02_RS16845 PF12146 Serine aminopeptidase, S33 SH02_RS16850 PF00874 PRD domain SH02_RS16855 PF12832 MFS_1 like family SH02_RS16860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS16860 PF03466 LysR substrate binding domain SH02_RS16865 PF00848 Ring hydroxylating alpha subunit (catalytic domain) SH02_RS16865 PF00355 Rieske [2Fe-2S] domain SH02_RS16870 PF00866 Ring hydroxylating beta subunit SH02_RS16875 PF00355 Rieske [2Fe-2S] domain SH02_RS16880 PF00106 short chain dehydrogenase SH02_RS16885 PF07992 Pyridine nucleotide-disulphide oxidoreductase SH02_RS16885 PF14759 Reductase C-terminal SH02_RS16890 PF07681 DoxX SH02_RS16895 PF01263 Aldose 1-epimerase SH02_RS16900 PF08240 Alcohol dehydrogenase GroES-like domain SH02_RS16900 PF00107 Zinc-binding dehydrogenase SH02_RS16905 PF02653 Branched-chain amino acid transport system / permease component SH02_RS16910 PF00005 ABC transporter SH02_RS16915 PF13407 Periplasmic binding protein domain SH02_RS16920 PF13181 Tetratricopeptide repeat SH02_RS16920 PF17128 Domain of unknown function (DUF5107) SH02_RS16925 PF00480 ROK family SH02_RS16930 PF00464 Serine hydroxymethyltransferase SH02_RS16935 PF00175 Oxidoreductase NAD-binding domain SH02_RS16935 PF00970 Oxidoreductase FAD-binding domain SH02_RS16935 PF00042 Globin SH02_RS16940 PF00543 Nitrogen regulatory protein P-II SH02_RS16945 PF00158 Sigma-54 interaction domain SH02_RS16945 PF00072 Response regulator receiver domain SH02_RS16950 PF13942 YfhG lipoprotein SH02_RS16955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SH02_RS16955 PF00512 His Kinase A (phospho-acceptor) domain SH02_RS16960 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain SH02_RS16960 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal SH02_RS16960 PF02769 AIR synthase related protein, C-terminal domain SH02_RS16965 PF00497 Bacterial extracellular solute-binding proteins, family 3 SH02_RS16965 PF01464 Transglycosylase SLT domain SH02_RS16970 PF14437 MafB19-like deaminase SH02_RS16980 PF01418 Helix-turn-helix domain, rpiR family SH02_RS16980 PF01380 SIS domain SH02_RS16985 PF12838 4Fe-4S dicluster domain SH02_RS17005 PF01648 4'-phosphopantetheinyl transferase superfamily SH02_RS17010 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ SH02_RS17015 PF02565 Recombination protein O C terminal SH02_RS17015 PF11967 Recombination protein O N terminal SH02_RS17020 PF01926 50S ribosome-binding GTPase SH02_RS17020 PF07650 KH domain SH02_RS17025 PF14622 Ribonuclease-III-like SH02_RS17025 PF00035 Double-stranded RNA binding motif SH02_RS17030 PF10502 Signal peptidase, peptidase S26 SH02_RS17035 PF03144 Elongation factor Tu domain 2 SH02_RS17035 PF06421 GTP-binding protein LepA C-terminus SH02_RS17035 PF00009 Elongation factor Tu GTP binding domain SH02_RS17035 PF00679 Elongation factor G C-terminus SH02_RS17045 PF17188 MucB/RseB C-terminal domain SH02_RS17045 PF03888 MucB/RseB N-terminal domain SH02_RS17050 PF03873 Anti sigma-E protein RseA, C-terminal domain SH02_RS17050 PF03872 Anti sigma-E protein RseA, N-terminal domain SH02_RS17055 PF04542 Sigma-70 region 2 SH02_RS17055 PF08281 Sigma-70, region 4 SH02_RS17065 PF00890 FAD binding domain SH02_RS17065 PF02910 Fumarate reductase flavoprotein C-term SH02_RS17070 PF05175 Methyltransferase small domain SH02_RS17075 PF00270 DEAD/DEAH box helicase SH02_RS17075 PF00271 Helicase conserved C-terminal domain SH02_RS17085 PF03466 LysR substrate binding domain SH02_RS17085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS17090 PF01810 LysE type translocator SH02_RS17095 PF01228 Glycine radical SH02_RS17100 PF03167 Uracil DNA glycosylase superfamily SH02_RS17105 PF00588 SpoU rRNA Methylase family SH02_RS17105 PF08032 RNA 2'-O ribose methyltransferase substrate binding SH02_RS17115 PF00085 Thioredoxin SH02_RS17120 PF03942 DTW domain SH02_RS17125 PF13380 CoA binding domain SH02_RS17125 PF00583 Acetyltransferase (GNAT) family SH02_RS17125 PF13607 Succinyl-CoA ligase like flavodoxin domain SH02_RS17130 PF13091 PLD-like domain SH02_RS17135 PF10043 Predicted periplasmic lipoprotein (DUF2279) SH02_RS17140 PF00083 Sugar (and other) transporter SH02_RS17170 PF10431 C-terminal, D2-small domain, of ClpB protein SH02_RS17170 PF02861 Clp amino terminal domain, pathogenicity island component SH02_RS17170 PF07724 AAA domain (Cdc48 subfamily) SH02_RS17170 PF17871 AAA lid domain SH02_RS17170 PF00004 ATPase family associated with various cellular activities (AAA) SH02_RS17175 PF02578 Multi-copper polyphenol oxidoreductase laccase SH02_RS17180 PF01479 S4 domain SH02_RS17180 PF00849 RNA pseudouridylate synthase SH02_RS17185 PF13525 Outer membrane lipoprotein SH02_RS17195 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SH02_RS17200 PF01817 Chorismate mutase type II SH02_RS17200 PF00800 Prephenate dehydratase SH02_RS17205 PF02153 Prephenate dehydrogenase SH02_RS17205 PF01817 Chorismate mutase type II SH02_RS17210 PF00793 DAHP synthetase I family SH02_RS17215 PF10973 Protein of unknown function (DUF2799) SH02_RS17220 PF13689 YfiR/HmsC-like SH02_RS17225 PF00990 Diguanylate cyclase, GGDEF domain SH02_RS17225 PF17152 Periplasmic sensor domain SH02_RS17230 PF00691 OmpA family SH02_RS17235 PF01245 Ribosomal protein L19 SH02_RS17240 PF01746 tRNA (Guanine-1)-methyltransferase SH02_RS17245 PF05239 PRC-barrel domain SH02_RS17245 PF01782 RimM N-terminal domain SH02_RS17250 PF00886 Ribosomal protein S16 SH02_RS17255 PF02978 Signal peptide binding domain SH02_RS17255 PF00448 SRP54-type protein, GTPase domain SH02_RS17255 PF02881 SRP54-type protein, helical bundle domain SH02_RS17260 PF01578 Cytochrome C assembly protein SH02_RS17265 PF01595 Cyclin M transmembrane N-terminal domain SH02_RS17265 PF00571 CBS domain SH02_RS17265 PF03471 Transporter associated domain SH02_RS17270 PF01025 GrpE SH02_RS17280 PF01513 ATP-NAD kinase SH02_RS17285 PF02463 RecF/RecN/SMC N terminal domain SH02_RS17290 PF04355 SmpA / OmlA family SH02_RS17295 PF03658 RnfH family Ubiquitin SH02_RS17300 PF03364 Polyketide cyclase / dehydrase and lipid transport SH02_RS17305 PF01668 SmpB protein SH02_RS17310 PF00589 Phage integrase family SH02_RS17310 PF13356 Arm DNA-binding domain SH02_RS17320 PF05930 Prophage CP4-57 regulatory protein (AlpA) SH02_RS17325 PF13148 Protein of unknown function (DUF3987) SH02_RS17335 PF00271 Helicase conserved C-terminal domain SH02_RS17340 PF08878 Domain of unknown function (DUF1837) SH02_RS17340 PF14130 Domain of unknown function (DUF4297) SH02_RS17345 PF07510 Protein of unknown function (DUF1524) SH02_RS17350 PF15935 RNase LS, bacterial toxin SH02_RS17355 PF15933 Antitoxin to bacterial toxin RNase LS or RnlA SH02_RS17360 PF01926 50S ribosome-binding GTPase SH02_RS17365 PF06067 Domain of unknown function (DUF932) SH02_RS17370 PF13280 WYL domain SH02_RS17370 PF08220 DeoR-like helix-turn-helix domain SH02_RS17405 PF03230 Antirestriction protein SH02_RS17410 PF04002 RadC-like JAB domain SH02_RS17415 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A SH02_RS17420 PF06755 CbtA_toxin of type IV toxin-antitoxin system SH02_RS17425 PF16168 Adhesin of bacterial autotransporter system, probable stalk SH02_RS17425 PF03797 Autotransporter beta-domain SH02_RS17425 PF03212 Pertactin SH02_RS17440 PF17621 Family of unknown function (DUF5508) SH02_RS17445 PF17612 Family of unknown function (DUF5507) SH02_RS17460 PF00128 Alpha amylase, catalytic domain SH02_RS17465 PF00128 Alpha amylase, catalytic domain SH02_RS17470 PF00128 Alpha amylase, catalytic domain SH02_RS17475 PF08943 CsiD SH02_RS17480 PF01266 FAD dependent oxidoreductase SH02_RS17485 PF00171 Aldehyde dehydrogenase family SH02_RS17490 PF00202 Aminotransferase class-III SH02_RS17495 PF00324 Amino acid permease SH02_RS17500 PF00392 Bacterial regulatory proteins, gntR family SH02_RS17500 PF07729 FCD domain SH02_RS17505 PF01476 LysM domain SH02_RS17505 PF04972 BON domain SH02_RS17510 PF01679 Proteolipid membrane potential modulator SH02_RS17515 PF01022 Bacterial regulatory protein, arsR family SH02_RS17520 PF11127 Protein of unknown function (DUF2892) SH02_RS17520 PF00581 Rhodanese-like domain SH02_RS17525 PF00816 H-NS histone family SH02_RS17530 PF06610 L-alanine exporter SH02_RS17535 PF09400 Protein of unknown function (DUF2002) SH02_RS17540 PF05957 Bacterial protein of unknown function (DUF883) SH02_RS17545 PF00462 Glutaredoxin SH02_RS17550 PF07972 NrdI Flavodoxin like SH02_RS17555 PF00317 Ribonucleotide reductase, all-alpha domain SH02_RS17555 PF02867 Ribonucleotide reductase, barrel domain SH02_RS17555 PF08343 Ribonucleotide reductase N-terminal SH02_RS17560 PF00268 Ribonucleotide reductase, small chain SH02_RS17565 PF00005 ABC transporter SH02_RS17565 PF00571 CBS domain SH02_RS17570 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS17575 PF04069 Substrate binding domain of ABC-type glycine betaine transport system SH02_RS17585 PF03591 AzlC protein SH02_RS17590 PF05437 Branched-chain amino acid transport protein (AzlD) SH02_RS17595 PF01047 MarR family SH02_RS17600 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SH02_RS17600 PF00529 HlyD membrane-fusion protein of T1SS SH02_RS17605 PF07690 Major Facilitator Superfamily SH02_RS17610 PF02664 S-Ribosylhomocysteinase (LuxS) SH02_RS17615 PF04262 Glutamate-cysteine ligase SH02_RS17620 PF09335 SNARE associated Golgi protein SH02_RS17625 PF13419 Haloacid dehalogenase-like hydrolase SH02_RS17660 PF02599 Global regulator protein family SH02_RS17665 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SH02_RS17665 PF02272 DHHA1 domain SH02_RS17665 PF01411 tRNA synthetases class II (A) SH02_RS17675 PF02631 RecX family SH02_RS17690 PF00302 Chloramphenicol acetyltransferase SH02_RS17695 PF02464 Competence-damaged protein SH02_RS17700 PF13406 Transglycosylase SLT domain SH02_RS17705 PF03608 PTS system enzyme II sorbitol-specific factor SH02_RS17710 PF07663 Sorbitol phosphotransferase enzyme II C-terminus SH02_RS17710 PF03612 Sorbitol phosphotransferase enzyme II N-terminus SH02_RS17715 PF03829 PTS system glucitol/sorbitol-specific IIA component SH02_RS17720 PF00106 short chain dehydrogenase SH02_RS17725 PF06923 Glucitol operon activator protein (GutM) SH02_RS17730 PF08220 DeoR-like helix-turn-helix domain SH02_RS17730 PF00455 DeoR C terminal sensor domain SH02_RS17735 PF00571 CBS domain SH02_RS17735 PF01380 SIS domain SH02_RS17740 PF01590 GAF domain SH02_RS17740 PF00158 Sigma-54 interaction domain SH02_RS17745 PF00753 Metallo-beta-lactamase superfamily SH02_RS17745 PF00258 Flavodoxin SH02_RS17745 PF00301 Rubredoxin SH02_RS17750 PF18113 Rubredoxin binding C-terminal domain SH02_RS17750 PF07992 Pyridine nucleotide-disulphide oxidoreductase SH02_RS17755 PF00708 Acylphosphatase SH02_RS17755 PF17788 HypF Kae1-like domain SH02_RS17755 PF01300 Telomere recombination SH02_RS17755 PF07503 HypF finger SH02_RS17760 PF13247 4Fe-4S dicluster domain SH02_RS17760 PF12800 4Fe-4S binding domain SH02_RS17765 PF00356 Bacterial regulatory proteins, lacI family SH02_RS17770 PF00367 phosphotransferase system, EIIB SH02_RS17770 PF02378 Phosphotransferase system, EIIC SH02_RS17775 PF00232 Glycosyl hydrolase family 1 SH02_RS17780 PF01750 Hydrogenase maturation protease SH02_RS17785 PF07450 Formate hydrogenlyase maturation protein HycH SH02_RS17790 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SH02_RS17795 PF12838 4Fe-4S dicluster domain SH02_RS17800 PF00374 Nickel-dependent hydrogenase SH02_RS17800 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit SH02_RS17800 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit SH02_RS17805 PF00146 NADH dehydrogenase SH02_RS17810 PF00361 Proton-conducting membrane transporter SH02_RS17815 PF13247 4Fe-4S dicluster domain SH02_RS17825 PF11046 Transcriptional repressor of hyc and hyp operons SH02_RS17830 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA SH02_RS17835 PF02492 CobW/HypB/UreG, nucleotide-binding domain SH02_RS17840 PF01455 HupF/HypC family SH02_RS17845 PF01924 Hydrogenase formation hypA family SH02_RS17850 PF02769 AIR synthase related protein, C-terminal domain SH02_RS17850 PF00586 AIR synthase related protein, N-terminal domain SH02_RS17855 PF01590 GAF domain SH02_RS17855 PF00158 Sigma-54 interaction domain SH02_RS17860 PF11756 Nitrous oxide-stimulated promoter SH02_RS17865 PF05192 MutS domain III SH02_RS17865 PF05188 MutS domain II SH02_RS17865 PF05190 MutS family domain IV SH02_RS17865 PF00488 MutS domain V SH02_RS17865 PF01624 MutS domain I SH02_RS17870 PF00149 Calcineurin-like phosphoesterase SH02_RS17875 PF00455 DeoR C terminal sensor domain SH02_RS17875 PF08220 DeoR-like helix-turn-helix domain SH02_RS17880 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SH02_RS17880 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SH02_RS17885 PF07005 Sugar-binding N-terminal domain SH02_RS17885 PF17042 Nucleotide-binding C-terminal domain SH02_RS17890 PF00596 Class II Aldolase and Adducin N-terminal domain SH02_RS17895 PF01261 Xylose isomerase-like TIM barrel SH02_RS17900 PF02447 GntP family permease SH02_RS17905 PF00140 Sigma-70 factor, region 1.2 SH02_RS17905 PF04545 Sigma-70, region 4 SH02_RS17905 PF04539 Sigma-70 region 3 SH02_RS17905 PF04542 Sigma-70 region 2 SH02_RS17910 PF01551 Peptidase family M23 SH02_RS17910 PF01476 LysM domain SH02_RS17920 PF01975 Survival protein SurE SH02_RS17925 PF01142 tRNA pseudouridine synthase D (TruD) SH02_RS17930 PF02542 YgbB family SH02_RS17935 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SH02_RS17940 PF04977 Septum formation initiator SH02_RS17945 PF12084 Protein of unknown function (DUF3561) SH02_RS17955 PF00009 Elongation factor Tu GTP binding domain SH02_RS17960 PF01507 Phosphoadenosine phosphosulfate reductase family SH02_RS17965 PF04389 Peptidase family M28 SH02_RS17970 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) SH02_RS17975 PF01867 CRISPR associated protein Cas1 SH02_RS17980 PF08798 CRISPR associated protein SH02_RS17985 PF09704 CRISPR-associated protein (Cas_Cas5) SH02_RS17990 PF09344 CT1975-like protein SH02_RS17995 PF09485 CRISPR-associated protein Cse2 (CRISPR_cse2) SH02_RS18000 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) SH02_RS18005 PF00270 DEAD/DEAH box helicase SH02_RS18005 PF18019 HD domain SH02_RS18005 PF00271 Helicase conserved C-terminal domain SH02_RS18010 PF01507 Phosphoadenosine phosphosulfate reductase family SH02_RS18015 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SH02_RS18015 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SH02_RS18020 PF00175 Oxidoreductase NAD-binding domain SH02_RS18020 PF00258 Flavodoxin SH02_RS18020 PF00667 FAD binding domain SH02_RS18025 PF01242 6-pyruvoyl tetrahydropterin synthase SH02_RS18030 PF01266 FAD dependent oxidoreductase SH02_RS18040 PF04309 Glycerol-3-phosphate responsive antiterminator SH02_RS18045 PF01012 Electron transfer flavoprotein domain SH02_RS18045 PF00766 Electron transfer flavoprotein FAD-binding domain SH02_RS18050 PF01012 Electron transfer flavoprotein domain SH02_RS18055 PF00083 Sugar (and other) transporter SH02_RS18060 PF01565 FAD binding domain SH02_RS18060 PF02913 FAD linked oxidases, C-terminal domain SH02_RS18070 PF07690 Major Facilitator Superfamily SH02_RS18075 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SH02_RS18075 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SH02_RS18080 PF04055 Radical SAM superfamily SH02_RS18090 PF04536 TPM domain SH02_RS18095 PF00113 Enolase, C-terminal TIM barrel domain SH02_RS18095 PF03952 Enolase, N-terminal domain SH02_RS18100 PF00117 Glutamine amidotransferase class-I SH02_RS18100 PF06418 CTP synthase N-terminus SH02_RS18105 PF03819 MazG nucleotide pyrophosphohydrolase domain SH02_RS18110 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system SH02_RS18115 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin SH02_RS18120 PF13291 ACT domain SH02_RS18120 PF04607 Region found in RelA / SpoT proteins SH02_RS18120 PF02824 TGS domain SH02_RS18125 PF05958 tRNA (Uracil-5-)-methyltransferase SH02_RS18125 PF01938 TRAM domain SH02_RS18130 PF00672 HAMP domain SH02_RS18130 PF00072 Response regulator receiver domain SH02_RS18130 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SH02_RS18130 PF01627 Hpt domain SH02_RS18130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SH02_RS18130 PF00512 His Kinase A (phospho-acceptor) domain SH02_RS18135 PF13378 Enolase C-terminal domain-like SH02_RS18140 PF13378 Enolase C-terminal domain-like SH02_RS18140 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SH02_RS18145 PF07690 Major Facilitator Superfamily SH02_RS18150 PF00258 Flavodoxin SH02_RS18155 PF00849 RNA pseudouridylate synthase SH02_RS18160 PF04287 tRNA pseudouridine synthase C SH02_RS18170 PF07348 Syd protein (SUKH-2) SH02_RS18175 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term SH02_RS18175 PF14489 QueF-like protein SH02_RS18180 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases SH02_RS18180 PF11892 Domain of unknown function (DUF3412) SH02_RS18180 PF03641 Possible lysine decarboxylase SH02_RS18190 PF03313 Serine dehydratase alpha chain SH02_RS18190 PF03315 Serine dehydratase beta chain SH02_RS18195 PF01367 5'-3' exonuclease, C-terminal SAM fold SH02_RS18195 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SH02_RS18200 PF00465 Iron-containing alcohol dehydrogenase SH02_RS18205 PF00596 Class II Aldolase and Adducin N-terminal domain SH02_RS18210 PF07690 Major Facilitator Superfamily SH02_RS18215 PF07881 L-fucose isomerase, first N-terminal domain SH02_RS18215 PF02952 L-fucose isomerase, C-terminal domain SH02_RS18215 PF07882 L-fucose isomerase, second N-terminal domain SH02_RS18220 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SH02_RS18220 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SH02_RS18225 PF05025 RbsD / FucU transport protein family SH02_RS18230 PF00455 DeoR C terminal sensor domain SH02_RS18230 PF08220 DeoR-like helix-turn-helix domain SH02_RS18235 PF01728 FtsJ-like methyltransferase SH02_RS18235 PF18125 RlmM ferredoxin-like domain SH02_RS18240 PF04241 Protein of unknown function (DUF423) SH02_RS18245 PF03466 LysR substrate binding domain SH02_RS18245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS18250 PF06004 Bacterial protein of unknown function (DUF903) SH02_RS18255 PF00266 Aminotransferase class-V SH02_RS18260 PF02657 Fe-S metabolism associated domain SH02_RS18265 PF00899 ThiF family SH02_RS18270 PF06725 3D domain SH02_RS18270 PF03562 MltA specific insert domain SH02_RS18290 PF11741 AMIN domain SH02_RS18290 PF01520 N-acetylmuramoyl-L-alanine amidase SH02_RS18295 PF00583 Acetyltransferase (GNAT) family SH02_RS18295 PF00696 Amino acid kinase family SH02_RS18305 PF00580 UvrD/REP helicase N-terminal domain SH02_RS18305 PF12705 PD-(D/E)XK nuclease superfamily SH02_RS18305 PF13361 UvrD-like helicase C-terminal domain SH02_RS18310 PF05193 Peptidase M16 inactive domain SH02_RS18310 PF16187 Middle or third domain of peptidase_M16 SH02_RS18310 PF00675 Insulinase (Peptidase family M16) SH02_RS18315 PF17946 RecC C-terminal domain SH02_RS18320 PF07963 Prokaryotic N-terminal methylation motif SH02_RS18320 PF12528 Type II secretion prepilin peptidase dependent protein C SH02_RS18325 PF10713 Protein of unknown function (DUF2509) SH02_RS18330 PF07963 Prokaryotic N-terminal methylation motif SH02_RS18335 PF07963 Prokaryotic N-terminal methylation motif SH02_RS18340 PF00303 Thymidylate synthase SH02_RS18345 PF01790 Prolipoprotein diacylglyceryl transferase SH02_RS18350 PF00391 PEP-utilising enzyme, mobile domain SH02_RS18350 PF02896 PEP-utilising enzyme, TIM barrel domain SH02_RS18350 PF01590 GAF domain SH02_RS18350 PF05524 PEP-utilising enzyme, N-terminal SH02_RS18355 PF00293 NUDIX domain SH02_RS18370 PF02976 DNA mismatch repair enzyme MutH SH02_RS18375 PF03741 Integral membrane protein TerC family SH02_RS18380 PF06004 Bacterial protein of unknown function (DUF903) SH02_RS18385 PF00248 Aldo/keto reductase family SH02_RS18390 PF07690 Major Facilitator Superfamily SH02_RS18395 PF00501 AMP-binding enzyme SH02_RS18395 PF01553 Acyltransferase SH02_RS18400 PF00356 Bacterial regulatory proteins, lacI family SH02_RS18405 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SH02_RS18405 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SH02_RS18410 PF03466 LysR substrate binding domain SH02_RS18410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS18415 PF01177 Asp/Glu/Hydantoin racemase SH02_RS18420 PF00083 Sugar (and other) transporter SH02_RS18430 PF04962 KduI/IolB family SH02_RS18435 PF02803 Thiolase, C-terminal domain SH02_RS18435 PF00108 Thiolase, N-terminal domain SH02_RS18440 PF03222 Tryptophan/tyrosine permease family SH02_RS18445 PF00196 Bacterial regulatory proteins, luxR family SH02_RS18450 PF00486 Transcriptional regulatory protein, C terminal SH02_RS18470 PF07720 Tetratricopeptide repeat SH02_RS18475 PF00486 Transcriptional regulatory protein, C terminal SH02_RS18485 PF01464 Transglycosylase SLT domain SH02_RS18490 PF00072 Response regulator receiver domain SH02_RS18490 PF00196 Bacterial regulatory proteins, luxR family SH02_RS18495 PF00072 Response regulator receiver domain SH02_RS18495 PF00196 Bacterial regulatory proteins, luxR family SH02_RS18510 PF09482 Bacterial type III secretion apparatus protein (OrgA_MxiK) SH02_RS18515 PF00665 Integrase core domain SH02_RS18515 PF13276 HTH-like domain SH02_RS18520 PF01527 Transposase SH02_RS18540 PF01551 Peptidase family M23 SH02_RS18540 PF01476 LysM domain SH02_RS18545 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase SH02_RS18545 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain SH02_RS18550 PF00941 FAD binding domain in molybdopterin dehydrogenase SH02_RS18550 PF03450 CO dehydrogenase flavoprotein C-terminal domain SH02_RS18555 PF01799 [2Fe-2S] binding domain SH02_RS18555 PF00111 2Fe-2S iron-sulfur cluster binding domain SH02_RS18560 PF02954 Bacterial regulatory protein, Fis family SH02_RS18560 PF00158 Sigma-54 interaction domain SH02_RS18560 PF13188 PAS domain SH02_RS18565 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SH02_RS18565 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SH02_RS18570 PF00291 Pyridoxal-phosphate dependent enzyme SH02_RS18575 PF07687 Peptidase dimerisation domain SH02_RS18575 PF01546 Peptidase family M20/M25/M40 SH02_RS18580 PF01979 Amidohydrolase family SH02_RS18585 PF00696 Amino acid kinase family SH02_RS18590 PF02625 XdhC and CoxI family SH02_RS18590 PF13478 XdhC Rossmann domain SH02_RS18600 PF12804 MobA-like NTP transferase domain SH02_RS18605 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SH02_RS18605 PF07992 Pyridine nucleotide-disulphide oxidoreductase SH02_RS18610 PF01979 Amidohydrolase family SH02_RS18615 PF00941 FAD binding domain in molybdopterin dehydrogenase SH02_RS18620 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase SH02_RS18620 PF01799 [2Fe-2S] binding domain SH02_RS18620 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain SH02_RS18625 PF00860 Permease family SH02_RS18630 PF01979 Amidohydrolase family SH02_RS18635 PF00860 Permease family SH02_RS18640 PF13247 4Fe-4S dicluster domain SH02_RS18645 PF07992 Pyridine nucleotide-disulphide oxidoreductase SH02_RS18645 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SH02_RS18645 PF13247 4Fe-4S dicluster domain SH02_RS18655 PF00860 Permease family SH02_RS18665 PF00293 NUDIX domain SH02_RS18670 PF00152 tRNA synthetases class II (D, K and N) SH02_RS18670 PF01336 OB-fold nucleic acid binding domain SH02_RS18675 PF03462 PCRF domain SH02_RS18675 PF00472 RF-1 domain SH02_RS18680 PF17768 RecJ OB domain SH02_RS18680 PF01368 DHH family SH02_RS18680 PF02272 DHHA1 domain SH02_RS18685 PF10411 Disulfide bond isomerase protein N-terminus SH02_RS18685 PF13098 Thioredoxin-like domain SH02_RS18690 PF00589 Phage integrase family SH02_RS18690 PF02899 Phage integrase, N-terminal SAM-like domain SH02_RS18695 PF00258 Flavodoxin SH02_RS18700 PF07254 Membrane-bound toxin component of toxin-antitoxin system SH02_RS18705 PF03937 Flavinator of succinate dehydrogenase SH02_RS18710 PF01571 Aminomethyltransferase folate-binding domain SH02_RS18715 PF03006 Haemolysin-III related SH02_RS18720 PF04266 ASCH domain SH02_RS18725 PF00232 Glycosyl hydrolase family 1 SH02_RS18735 PF02347 Glycine cleavage system P-protein SH02_RS18740 PF01597 Glycine cleavage H-protein SH02_RS18745 PF08669 Glycine cleavage T-protein C-terminal barrel domain SH02_RS18745 PF01571 Aminomethyltransferase folate-binding domain SH02_RS18750 PF01494 FAD binding domain SH02_RS18755 PF01494 FAD binding domain SH02_RS18760 PF05195 Aminopeptidase P, N-terminal domain SH02_RS18760 PF00557 Metallopeptidase family M24 SH02_RS18765 PF03695 Uncharacterised protein family (UPF0149) SH02_RS18770 PF05164 Cell division protein ZapA SH02_RS18775 PF01812 5-formyltetrahydrofolate cyclo-ligase family SH02_RS18780 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SH02_RS18780 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SH02_RS18780 PF01842 ACT domain SH02_RS18785 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) SH02_RS18790 PF03466 LysR substrate binding domain SH02_RS18795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS18795 PF03466 LysR substrate binding domain SH02_RS18800 PF01642 Methylmalonyl-CoA mutase SH02_RS18800 PF02310 B12 binding domain SH02_RS18810 PF00378 Enoyl-CoA hydratase/isomerase SH02_RS18815 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain SH02_RS18815 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain SH02_RS18820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS18820 PF03466 LysR substrate binding domain SH02_RS18825 PF04402 Protein of unknown function (DUF541) SH02_RS18830 PF01810 LysE type translocator SH02_RS18835 PF05552 Conserved TM helix SH02_RS18835 PF00924 Mechanosensitive ion channel SH02_RS18840 PF01116 Fructose-bisphosphate aldolase class-II SH02_RS18845 PF00162 Phosphoglycerate kinase SH02_RS18850 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SH02_RS18850 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SH02_RS18860 PF05068 Mannitol repressor SH02_RS18865 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded SH02_RS18870 PF00107 Zinc-binding dehydrogenase SH02_RS18870 PF08240 Alcohol dehydrogenase GroES-like domain SH02_RS18875 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SH02_RS18875 PF02378 Phosphotransferase system, EIIC SH02_RS18880 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SH02_RS18885 PF00456 Transketolase, thiamine diphosphate binding domain SH02_RS18885 PF02779 Transketolase, pyrimidine binding domain SH02_RS18885 PF02780 Transketolase, C-terminal domain SH02_RS18890 PF01435 Peptidase family M48 SH02_RS18895 PF00491 Arginase family SH02_RS18900 PF17944 Arginine decarboxylase C-terminal helical extension SH02_RS18900 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SH02_RS18900 PF17810 Arginine decarboxylase helical bundle domain SH02_RS18905 PF11036 Virulence promoting factor SH02_RS18910 PF17430 Uncharacterized YqgC-like SH02_RS18920 PF02772 S-adenosylmethionine synthetase, central domain SH02_RS18920 PF02773 S-adenosylmethionine synthetase, C-terminal domain SH02_RS18920 PF00438 S-adenosylmethionine synthetase, N-terminal domain SH02_RS18930 PF10263 SprT-like family SH02_RS18930 PF17283 SprT-like zinc ribbon domain SH02_RS18935 PF04231 Endonuclease I SH02_RS18940 PF04452 RNA methyltransferase SH02_RS18945 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain SH02_RS18945 PF02951 Prokaryotic glutathione synthetase, N-terminal domain SH02_RS18950 PF02622 Uncharacterized ACR, COG1678 SH02_RS18955 PF03652 Holliday junction resolvase SH02_RS18960 PF00437 Type II/IV secretion system protein SH02_RS18965 PF01168 Alanine racemase, N-terminal domain SH02_RS18970 PF02325 YGGT family SH02_RS18975 PF02594 Uncharacterised ACR, YggU family COG1872 SH02_RS18980 PF01725 Ham1 family SH02_RS18985 PF06969 HemN C-terminal domain SH02_RS18985 PF04055 Radical SAM superfamily SH02_RS18990 PF06717 Protein of unknown function (DUF1202) SH02_RS18995 PF17763 Glutaminase/Asparaginase C-terminal domain SH02_RS18995 PF00710 Asparaginase, N-terminal SH02_RS19000 PF11101 Protein of unknown function (DUF2884) SH02_RS19010 PF04320 Protein with unknown function (DUF469) SH02_RS19015 PF02390 Putative methyltransferase SH02_RS19020 PF14815 NUDIX domain SH02_RS19020 PF00730 HhH-GPD superfamily base excision DNA repair protein SH02_RS19020 PF00633 Helix-hairpin-helix motif SH02_RS19020 PF10576 Iron-sulfur binding domain of endonuclease III SH02_RS19025 PF04362 Bacterial Fe(2+) trafficking SH02_RS19030 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain SH02_RS19030 PF01464 Transglycosylase SLT domain SH02_RS19035 PF03825 Nucleoside H+ symporter SH02_RS19040 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SH02_RS19040 PF01276 Orn/Lys/Arg decarboxylase, major domain SH02_RS19040 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain SH02_RS19045 PF04474 Protein of unknown function (DUF554) SH02_RS19055 PF04612 Type II secretion system (T2SS), protein M SH02_RS19060 PF12693 GspL periplasmic domain SH02_RS19065 PF11356 Type II secretion system protein C SH02_RS19070 PF16549 Type II secretion system (T2SS) pilotin, S protein SH02_RS19075 PF06750 Bacterial Peptidase A24 N-terminal domain SH02_RS19075 PF01478 Type IV leader peptidase family SH02_RS19080 PF13402 Peptidase M60, enhancin and enhancin-like SH02_RS19080 PF13322 Domain of unknown function (DUF4092) SH02_RS19080 PF17291 N-terminal domain of M60-like peptidases SH02_RS19090 PF02652 L-lactate permease SH02_RS19095 PF01274 Malate synthase SH02_RS19100 PF03928 Haem-degrading SH02_RS19105 PF02754 Cysteine-rich domain SH02_RS19105 PF13183 4Fe-4S dicluster domain SH02_RS19110 PF01565 FAD binding domain SH02_RS19115 PF02913 FAD linked oxidases, C-terminal domain SH02_RS19115 PF01565 FAD binding domain SH02_RS19120 PF00392 Bacterial regulatory proteins, gntR family SH02_RS19120 PF07729 FCD domain SH02_RS19130 PF01609 Transposase DDE domain SH02_RS19130 PF05598 Transposase domain (DUF772) SH02_RS19135 PF01943 Polysaccharide biosynthesis protein SH02_RS19155 PF01384 Phosphate transporter family SH02_RS19160 PF03738 Glutathionylspermidine synthase preATP-grasp SH02_RS19160 PF05257 CHAP domain SH02_RS19165 PF02798 Glutathione S-transferase, N-terminal domain SH02_RS19170 PF01455 HupF/HypC family SH02_RS19175 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA SH02_RS19180 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE SH02_RS19185 PF01750 Hydrogenase maturation protease SH02_RS19190 PF00374 Nickel-dependent hydrogenase SH02_RS19195 PF03916 Polysulphide reductase, NrfD SH02_RS19200 PF13247 4Fe-4S dicluster domain SH02_RS19205 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SH02_RS19205 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal SH02_RS19215 PF11115 Protein of unknown function (DUF2623) SH02_RS19225 PF00248 Aldo/keto reductase family SH02_RS19230 PF03350 Uncharacterized protein family, UPF0114 SH02_RS19240 PF02472 Biopolymer transport protein ExbD/TolR SH02_RS19245 PF01618 MotA/TolQ/ExbB proton channel family SH02_RS19255 PF01053 Cys/Met metabolism PLP-dependent enzyme SH02_RS19260 PF09335 SNARE associated Golgi protein SH02_RS19265 PF12833 Helix-turn-helix domain SH02_RS19265 PF06719 AraC-type transcriptional regulator N-terminus SH02_RS19275 PF00465 Iron-containing alcohol dehydrogenase SH02_RS19280 PF00248 Aldo/keto reductase family SH02_RS19285 PF12883 Protein of unknown function (DUF3828) SH02_RS19290 PF04728 Lipoprotein leucine-zipper SH02_RS19295 PF04055 Radical SAM superfamily SH02_RS19295 PF11842 Domain of unknown function (DUF3362) SH02_RS19295 PF08497 Radical SAM N-terminal SH02_RS19300 PF00394 Multicopper oxidase SH02_RS19300 PF07731 Multicopper oxidase SH02_RS19300 PF07732 Multicopper oxidase SH02_RS19305 PF01553 Acyltransferase SH02_RS19310 PF03989 DNA gyrase C-terminal domain, beta-propeller SH02_RS19310 PF00521 DNA gyrase/topoisomerase IV, subunit A SH02_RS19315 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SH02_RS19320 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA SH02_RS19325 PF15723 Motility quorum-sensing regulator, toxin of MqsA SH02_RS19330 PF06445 GyrI-like small molecule binding domain SH02_RS19335 PF04076 Bacterial OB fold (BOF) protein SH02_RS19340 PF00486 Transcriptional regulatory protein, C terminal SH02_RS19340 PF00072 Response regulator receiver domain SH02_RS19345 PF08521 Two-component sensor kinase N-terminal SH02_RS19345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SH02_RS19345 PF00512 His Kinase A (phospho-acceptor) domain SH02_RS19350 PF10840 Protein of unknown function (DUF2645) SH02_RS19355 PF02525 Flavodoxin-like fold SH02_RS19360 PF03992 Antibiotic biosynthesis monooxygenase SH02_RS19365 PF01751 Toprim domain SH02_RS19365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SH02_RS19365 PF00986 DNA gyrase B subunit, carboxyl terminus SH02_RS19365 PF00204 DNA gyrase B SH02_RS19370 PF05728 Uncharacterised protein family (UPF0227) SH02_RS19375 PF00149 Calcineurin-like phosphoesterase SH02_RS19380 PF06853 Protein of unknown function (DUF1249) SH02_RS19385 PF00293 NUDIX domain SH02_RS19390 PF02321 Outer membrane efflux protein SH02_RS19400 PF06693 Protein of unknown function (DUF1190) SH02_RS19405 PF03738 Glutathionylspermidine synthase preATP-grasp SH02_RS19410 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase SH02_RS19415 PF02535 ZIP Zinc transporter SH02_RS19425 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase SH02_RS19430 PF04380 Membrane fusogenic activity SH02_RS19435 PF00419 Fimbrial protein SH02_RS19440 PF01527 Transposase SH02_RS19445 PF13276 HTH-like domain SH02_RS19445 PF00665 Integrase core domain SH02_RS19450 PF13953 PapC C-terminal domain SH02_RS19450 PF00577 Outer membrane usher protein SH02_RS19450 PF13954 PapC N-terminal domain SH02_RS19455 PF02753 Pili assembly chaperone PapD, C-terminal domain SH02_RS19455 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SH02_RS19465 PF08971 Glycogen synthesis protein SH02_RS19470 PF07290 Protein of unknown function (DUF1449) SH02_RS19475 PF01145 SPFH domain / Band 7 family SH02_RS19475 PF15975 Flotillin SH02_RS19490 PF01467 Cytidylyltransferase-like SH02_RS19490 PF00294 pfkB family carbohydrate kinase SH02_RS19495 PF08335 GlnD PII-uridylyltransferase SH02_RS19495 PF03710 Glutamate-ammonia ligase adenylyltransferase SH02_RS19500 PF01928 CYTH domain SH02_RS19510 PF08239 Bacterial SH3 domain SH02_RS19515 PF01743 Poly A polymerase head domain SH02_RS19515 PF12627 Probable RNA and SrmB- binding site of polymerase A SH02_RS19515 PF01966 HD domain SH02_RS19520 PF02673 Bacitracin resistance protein BacA SH02_RS19525 PF02152 Dihydroneopterin aldolase SH02_RS19530 PF02660 Glycerol-3-phosphate acyltransferase SH02_RS19535 PF03466 LysR substrate binding domain SH02_RS19535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS19540 PF05681 Fumarate hydratase (Fumerase) SH02_RS19550 PF00939 Sodium:sulfate symporter transmembrane region SH02_RS19555 PF00814 Glycoprotease family SH02_RS19560 PF01165 Ribosomal protein S21 SH02_RS19565 PF08275 DNA primase catalytic core, N-terminal domain SH02_RS19565 PF08278 DNA primase DnaG DnaB-binding SH02_RS19565 PF01807 CHC2 zinc finger SH02_RS19565 PF10410 DnaB-helicase binding domain of primase SH02_RS19570 PF04546 Sigma-70, non-essential region SH02_RS19570 PF04542 Sigma-70 region 2 SH02_RS19570 PF04545 Sigma-70, region 4 SH02_RS19570 PF04539 Sigma-70 region 3 SH02_RS19570 PF03979 Sigma-70 factor, region 1.1 SH02_RS19570 PF00140 Sigma-70 factor, region 1.2 SH02_RS19575 PF03167 Uracil DNA glycosylase superfamily SH02_RS19585 PF08021 Siderophore-interacting FAD-binding domain SH02_RS19585 PF04954 Siderophore-interacting protein SH02_RS19590 PF03551 Transcriptional regulator PadR-like family SH02_RS19595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SH02_RS19595 PF08447 PAS fold SH02_RS19600 PF00202 Aminotransferase class-III SH02_RS19605 PF01588 Putative tRNA binding domain SH02_RS19610 PF00356 Bacterial regulatory proteins, lacI family SH02_RS19615 PF00703 Glycosyl hydrolases family 2 SH02_RS19615 PF02837 Glycosyl hydrolases family 2, sugar binding domain SH02_RS19615 PF02836 Glycosyl hydrolases family 2, TIM barrel domain SH02_RS19615 PF02929 Beta galactosidase small chain SH02_RS19615 PF16353 Domain of unknown function(DUF4981) SH02_RS19620 PF04074 YhcH/YjgK/YiaL SH02_RS19625 PF13520 Amino acid permease SH02_RS19635 PF01204 Trehalase SH02_RS19640 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SH02_RS19640 PF07992 Pyridine nucleotide-disulphide oxidoreductase SH02_RS19645 PF01381 Helix-turn-helix SH02_RS19650 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system SH02_RS19660 PF05175 Methyltransferase small domain SH02_RS19665 PF01863 Protein of unknown function DUF45 SH02_RS19670 PF02698 DUF218 domain SH02_RS19675 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SH02_RS19680 PF03741 Integral membrane protein TerC family SH02_RS19685 PF00375 Sodium:dicarboxylate symporter family SH02_RS19690 PF10688 Bacterial inner membrane protein SH02_RS19695 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus SH02_RS19695 PF08666 SAF domain SH02_RS19700 PF02614 Glucuronate isomerase SH02_RS19705 PF07690 Major Facilitator Superfamily SH02_RS19710 PF07729 FCD domain SH02_RS19710 PF00392 Bacterial regulatory proteins, gntR family SH02_RS19715 PF09335 SNARE associated Golgi protein SH02_RS19720 PF13721 SecD export protein N-terminal TM region SH02_RS19725 PF06476 Protein of unknown function (DUF1090) SH02_RS19730 PF05957 Bacterial protein of unknown function (DUF883) SH02_RS19735 PF07332 Putative Actinobacterial Holin-X, holin superfamily III SH02_RS19740 PF13997 YqjK-like protein SH02_RS19745 PF07681 DoxX SH02_RS19750 PF13409 Glutathione S-transferase, N-terminal domain SH02_RS19755 PF05656 Protein of unknown function (DUF805) SH02_RS19760 PF05656 Protein of unknown function (DUF805) SH02_RS19765 PF03466 LysR substrate binding domain SH02_RS19765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS19770 PF17954 Quercetinase C-terminal cupin domain SH02_RS19770 PF02678 Pirin SH02_RS19780 PF03313 Serine dehydratase alpha chain SH02_RS19790 PF03315 Serine dehydratase beta chain SH02_RS19790 PF03313 Serine dehydratase alpha chain SH02_RS19795 PF01042 Endoribonuclease L-PSP SH02_RS19800 PF02901 Pyruvate formate lyase-like SH02_RS19800 PF01228 Glycine radical SH02_RS19810 PF05598 Transposase domain (DUF772) SH02_RS19810 PF01609 Transposase DDE domain SH02_RS19815 PF00871 Acetokinase family SH02_RS19820 PF03222 Tryptophan/tyrosine permease family SH02_RS19825 PF00291 Pyridoxal-phosphate dependent enzyme SH02_RS19830 PF03466 LysR substrate binding domain SH02_RS19830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS19850 PF02595 Glycerate kinase family SH02_RS19855 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SH02_RS19855 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SH02_RS19860 PF03328 HpcH/HpaI aldolase/citrate lyase family SH02_RS19865 PF07690 Major Facilitator Superfamily SH02_RS19870 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus SH02_RS19870 PF08666 SAF domain SH02_RS19875 PF15937 prlF antitoxin for toxin YhaV_toxin SH02_RS19880 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system SH02_RS19885 PF00455 DeoR C terminal sensor domain SH02_RS19885 PF08220 DeoR-like helix-turn-helix domain SH02_RS19890 PF08013 Tagatose 6 phosphate kinase SH02_RS19895 PF03830 PTS system sorbose subfamily IIB component SH02_RS19900 PF03609 PTS system sorbose-specific iic component SH02_RS19905 PF01979 Amidohydrolase family SH02_RS19910 PF01380 SIS domain SH02_RS19915 PF01116 Fructose-bisphosphate aldolase class-II SH02_RS19920 PF03830 PTS system sorbose subfamily IIB component SH02_RS19925 PF03609 PTS system sorbose-specific iic component SH02_RS19930 PF03613 PTS system mannose/fructose/sorbose family IID component SH02_RS19935 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SH02_RS19940 PF00419 Fimbrial protein SH02_RS19945 PF02753 Pili assembly chaperone PapD, C-terminal domain SH02_RS19945 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SH02_RS19950 PF00577 Outer membrane usher protein SH02_RS19950 PF13953 PapC C-terminal domain SH02_RS19950 PF13954 PapC N-terminal domain SH02_RS19955 PF00419 Fimbrial protein SH02_RS19960 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SH02_RS19965 PF04348 LppC putative lipoprotein SH02_RS19970 PF02021 Uncharacterised protein family UPF0102 SH02_RS19975 PF13580 SIS domain SH02_RS19980 PF04972 BON domain SH02_RS19985 PF03773 Predicted permease SH02_RS19990 PF13460 NAD(P)H-binding SH02_RS19995 PF01965 DJ-1/PfpI family SH02_RS20005 PF01541 GIY-YIG catalytic domain SH02_RS20010 PF13508 Acetyltransferase (GNAT) domain SH02_RS20015 PF02036 SCP-2 sterol transfer family SH02_RS20020 PF01136 Peptidase family U32 SH02_RS20025 PF01136 Peptidase family U32 SH02_RS20030 PF00296 Luciferase-like monooxygenase SH02_RS20035 PF03222 Tryptophan/tyrosine permease family SH02_RS20045 PF00271 Helicase conserved C-terminal domain SH02_RS20045 PF12343 Cold shock protein DEAD box A SH02_RS20045 PF00270 DEAD/DEAH box helicase SH02_RS20045 PF03880 DbpA RNA binding domain SH02_RS20050 PF07719 Tetratricopeptide repeat SH02_RS20050 PF13181 Tetratricopeptide repeat SH02_RS20055 PF03725 3' exoribonuclease family, domain 2 SH02_RS20055 PF01138 3' exoribonuclease family, domain 1 SH02_RS20055 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SH02_RS20055 PF00013 KH domain SH02_RS20055 PF00575 S1 RNA binding domain SH02_RS20060 PF00312 Ribosomal protein S15 SH02_RS20065 PF01509 TruB family pseudouridylate synthase (N terminal domain) SH02_RS20065 PF16198 tRNA pseudouridylate synthase B C-terminal domain SH02_RS20065 PF09157 Pseudouridine synthase II TruB, C-terminal SH02_RS20070 PF02033 Ribosome-binding factor A SH02_RS20075 PF04760 Translation initiation factor IF-2, N-terminal region SH02_RS20075 PF11987 Translation-initiation factor 2 SH02_RS20075 PF08364 Bacterial translation initiation factor IF-2 associated region SH02_RS20075 PF00009 Elongation factor Tu GTP binding domain SH02_RS20080 PF13184 NusA-like KH domain SH02_RS20080 PF00575 S1 RNA binding domain SH02_RS20080 PF08529 NusA N-terminal domain SH02_RS20085 PF02576 RimP N-terminal domain SH02_RS20085 PF17384 RimP C-terminal SH3 domain SH02_RS20095 PF00764 Arginosuccinate synthase SH02_RS20100 PF00884 Sulfatase SH02_RS20110 PF03840 Preprotein translocase SecG subunit SH02_RS20115 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SH02_RS20115 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SH02_RS20115 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SH02_RS20115 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SH02_RS20120 PF00809 Pterin binding enzyme SH02_RS20125 PF00004 ATPase family associated with various cellular activities (AAA) SH02_RS20125 PF17862 AAA+ lid domain SH02_RS20125 PF06480 FtsH Extracellular SH02_RS20125 PF01434 Peptidase family M41 SH02_RS20130 PF01728 FtsJ-like methyltransferase SH02_RS20135 PF01985 CRS1 / YhbY (CRM) domain SH02_RS20140 PF03449 Transcription elongation factor, N-terminal SH02_RS20140 PF01272 Transcription elongation factor, GreA/GreB, C-term SH02_RS20145 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family SH02_RS20150 PF01926 50S ribosome-binding GTPase SH02_RS20150 PF01018 GTP1/OBG SH02_RS20155 PF00892 EamA-like transporter family SH02_RS20160 PF01016 Ribosomal L27 protein SH02_RS20165 PF00829 Ribosomal prokaryotic L21 protein SH02_RS20170 PF00348 Polyprenyl synthetase SH02_RS20175 PF13693 Winged helix-turn-helix DNA-binding SH02_RS20180 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SH02_RS20185 PF01722 BolA-like protein SH02_RS20190 PF13466 STAS domain SH02_RS20195 PF05494 MlaC protein SH02_RS20200 PF02470 MlaD protein SH02_RS20205 PF02405 Permease MlaE SH02_RS20210 PF00005 ABC transporter SH02_RS20215 PF01699 Sodium/calcium exchanger protein SH02_RS20220 PF00571 CBS domain SH02_RS20220 PF01380 SIS domain SH02_RS20230 PF06835 Lipopolysaccharide-assembly, LptC-related SH02_RS20235 PF03968 OstA-like protein SH02_RS20240 PF12399 Branched-chain amino acid ATP-binding cassette transporter SH02_RS20240 PF00005 ABC transporter SH02_RS20245 PF00309 Sigma-54 factor, Activator interacting domain (AID) SH02_RS20245 PF04963 Sigma-54 factor, core binding domain SH02_RS20245 PF04552 Sigma-54, DNA binding domain SH02_RS20250 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SH02_RS20255 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SH02_RS20260 PF03668 P-loop ATPase protein family SH02_RS20265 PF00381 PTS HPr component phosphorylation site SH02_RS20270 PF10707 PhoP regulatory network protein YrbL SH02_RS20275 PF01609 Transposase DDE domain SH02_RS20275 PF05598 Transposase domain (DUF772) SH02_RS20285 PF06551 Protein of unknown function (DUF1120) SH02_RS20290 PF17761 DUF1016 N-terminal domain SH02_RS20290 PF06250 YhcG PDDEXK nuclease domain SH02_RS20295 PF04074 YhcH/YjgK/YiaL SH02_RS20300 PF00480 ROK family SH02_RS20305 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase SH02_RS20310 PF07690 Major Facilitator Superfamily SH02_RS20315 PF00701 Dihydrodipicolinate synthetase family SH02_RS20320 PF00392 Bacterial regulatory proteins, gntR family SH02_RS20320 PF07729 FCD domain SH02_RS20325 PF03606 C4-dicarboxylate anaerobic carrier SH02_RS20330 PF04386 Stringent starvation protein B SH02_RS20335 PF00043 Glutathione S-transferase, C-terminal domain SH02_RS20335 PF02798 Glutathione S-transferase, N-terminal domain SH02_RS20340 PF00380 Ribosomal protein S9/S16 SH02_RS20345 PF00572 Ribosomal protein L13 SH02_RS20350 PF03969 AFG1-like ATPase SH02_RS20355 PF06295 Protein of unknown function (DUF1043) SH02_RS20360 PF00595 PDZ domain SH02_RS20360 PF13180 PDZ domain SH02_RS20365 PF13180 PDZ domain SH02_RS20370 PF00056 lactate/malate dehydrogenase, NAD binding domain SH02_RS20370 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SH02_RS20375 PF02863 Arginine repressor, C-terminal domain SH02_RS20375 PF01316 Arginine repressor, DNA binding domain SH02_RS20380 PF07338 Protein of unknown function (DUF1471) SH02_RS20385 PF01337 Barstar (barnase inhibitor) SH02_RS20390 PF04632 Fusaric acid resistance protein family SH02_RS20395 PF13533 Biotin-lipoyl like SH02_RS20400 PF07869 Protein of unknown function (DUF1656) SH02_RS20405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS20405 PF03466 LysR substrate binding domain SH02_RS20410 PF01523 Putative modulator of DNA gyrase SH02_RS20415 PF13502 AsmA-like C-terminal region SH02_RS20415 PF13116 Protein of unknown function SH02_RS20420 PF00575 S1 RNA binding domain SH02_RS20420 PF10150 Ribonuclease E/G family SH02_RS20425 PF02545 Maf-like protein SH02_RS20430 PF04093 rod shape-determining protein MreD SH02_RS20435 PF04085 rod shape-determining protein MreC SH02_RS20450 PF00563 EAL domain SH02_RS20450 PF00990 Diguanylate cyclase, GGDEF domain SH02_RS20450 PF17157 Gammaproteobacterial periplasmic sensor domain SH02_RS20455 PF00107 Zinc-binding dehydrogenase SH02_RS20455 PF08240 Alcohol dehydrogenase GroES-like domain SH02_RS20470 PF01794 Ferric reductase like transmembrane component SH02_RS20475 PF00364 Biotin-requiring enzyme SH02_RS20480 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SH02_RS20480 PF00289 Biotin carboxylase, N-terminal domain SH02_RS20480 PF02785 Biotin carboxylase C-terminal domain SH02_RS20485 PF06196 Protein of unknown function (DUF997) SH02_RS20490 PF00474 Sodium:solute symporter family SH02_RS20500 PF01207 Dihydrouridine synthase (Dus) SH02_RS20505 PF02954 Bacterial regulatory protein, Fis family SH02_RS20510 PF01555 DNA methylase SH02_RS20515 PF10831 Protein of unknown function (DUF2556) SH02_RS20520 PF00440 Bacterial regulatory proteins, tetR family SH02_RS20520 PF08361 MAATS-type transcriptional repressor, C-terminal region SH02_RS20525 PF00529 HlyD membrane-fusion protein of T1SS SH02_RS20525 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SH02_RS20530 PF00873 AcrB/AcrD/AcrF family SH02_RS20545 PF00497 Bacterial extracellular solute-binding proteins, family 3 SH02_RS20550 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS20555 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS20560 PF00005 ABC transporter SH02_RS20600 PF00132 Bacterial transferase hexapeptide (six repeats) SH02_RS20605 PF07369 Protein of unknown function (DUF1488) SH02_RS20610 PF01488 Shikimate / quinate 5-dehydrogenase SH02_RS20610 PF08501 Shikimate dehydrogenase substrate binding domain SH02_RS20610 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SH02_RS20615 PF01300 Telomere recombination SH02_RS20620 PF01396 Topoisomerase DNA binding C4 zinc finger SH02_RS20625 PF04361 Protein of unknown function (DUF494) SH02_RS20630 PF02481 DNA recombination-mediator protein A SH02_RS20630 PF17782 DprA winged helix domain SH02_RS20635 PF01327 Polypeptide deformylase SH02_RS20640 PF00551 Formyl transferase SH02_RS20640 PF02911 Formyl transferase, C-terminal domain SH02_RS20645 PF01029 NusB family SH02_RS20645 PF01189 16S rRNA methyltransferase RsmB/F SH02_RS20650 PF02080 TrkA-C domain SH02_RS20650 PF02254 TrkA-N domain SH02_RS20655 PF01741 Large-conductance mechanosensitive channel, MscL SH02_RS20660 PF03889 Alternative ribosome-rescue factor A SH02_RS20665 PF13411 MerR HTH family regulatory protein SH02_RS20670 PF09350 Domain of unknown function (DUF1992) SH02_RS20675 PF01196 Ribosomal protein L17 SH02_RS20680 PF01000 RNA polymerase Rpb3/RpoA insert domain SH02_RS20680 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SH02_RS20680 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SH02_RS20685 PF01479 S4 domain SH02_RS20685 PF00163 Ribosomal protein S4/S9 N-terminal domain SH02_RS20690 PF00411 Ribosomal protein S11 SH02_RS20695 PF00416 Ribosomal protein S13/S18 SH02_RS20700 PF00444 Ribosomal protein L36 SH02_RS20705 PF00344 SecY translocase SH02_RS20710 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SH02_RS20715 PF00327 Ribosomal protein L30p/L7e SH02_RS20720 PF03719 Ribosomal protein S5, C-terminal domain SH02_RS20720 PF00333 Ribosomal protein S5, N-terminal domain SH02_RS20725 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast SH02_RS20730 PF00347 Ribosomal protein L6 SH02_RS20735 PF00410 Ribosomal protein S8 SH02_RS20740 PF00253 Ribosomal protein S14p/S29e SH02_RS20745 PF00673 ribosomal L5P family C-terminus SH02_RS20745 PF00281 Ribosomal protein L5 SH02_RS20750 PF00467 KOW motif SH02_RS20750 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 SH02_RS20755 PF00238 Ribosomal protein L14p/L23e SH02_RS20760 PF00366 Ribosomal protein S17 SH02_RS20765 PF00831 Ribosomal L29 protein SH02_RS20770 PF00252 Ribosomal protein L16p/L10e SH02_RS20775 PF07650 KH domain SH02_RS20775 PF00189 Ribosomal protein S3, C-terminal domain SH02_RS20780 PF00237 Ribosomal protein L22p/L17e SH02_RS20785 PF00203 Ribosomal protein S19 SH02_RS20790 PF00181 Ribosomal Proteins L2, RNA binding domain SH02_RS20790 PF03947 Ribosomal Proteins L2, C-terminal domain SH02_RS20795 PF00276 Ribosomal protein L23 SH02_RS20800 PF00573 Ribosomal protein L4/L1 family SH02_RS20805 PF00297 Ribosomal protein L3 SH02_RS20810 PF00338 Ribosomal protein S10p/S20e SH02_RS20820 PF13401 AAA domain SH02_RS20820 PF01471 Putative peptidoglycan binding domain SH02_RS20825 PF11356 Type II secretion system protein C SH02_RS20830 PF00263 Bacterial type II and III secretion system protein SH02_RS20830 PF03958 Bacterial type II/III secretion system short domain SH02_RS20835 PF00437 Type II/IV secretion system protein SH02_RS20840 PF00482 Type II secretion system (T2SS), protein F SH02_RS20845 PF07963 Prokaryotic N-terminal methylation motif SH02_RS20845 PF08334 Type II secretion system (T2SS), protein G SH02_RS20850 PF12019 Type II transport protein GspH SH02_RS20850 PF07963 Prokaryotic N-terminal methylation motif SH02_RS20855 PF02501 Type II secretion system (T2SS), protein I SH02_RS20855 PF07963 Prokaryotic N-terminal methylation motif SH02_RS20860 PF11612 Type II secretion system (T2SS), protein J SH02_RS20860 PF07963 Prokaryotic N-terminal methylation motif SH02_RS20865 PF03934 Type II secretion system (T2SS), protein K SH02_RS20870 PF05134 Type II secretion system (T2SS), protein L SH02_RS20870 PF12693 GspL periplasmic domain SH02_RS20875 PF04612 Type II secretion system (T2SS), protein M SH02_RS20880 PF01478 Type IV leader peptidase family SH02_RS20885 PF00210 Ferritin-like domain SH02_RS20890 PF04324 BFD-like [2Fe-2S] binding domain SH02_RS20895 PF02839 Carbohydrate binding domain SH02_RS20900 PF03144 Elongation factor Tu domain 2 SH02_RS20900 PF03143 Elongation factor Tu C-terminal domain SH02_RS20900 PF00009 Elongation factor Tu GTP binding domain SH02_RS20905 PF03144 Elongation factor Tu domain 2 SH02_RS20905 PF00009 Elongation factor Tu GTP binding domain SH02_RS20905 PF00679 Elongation factor G C-terminus SH02_RS20905 PF14492 Elongation Factor G, domain II SH02_RS20905 PF03764 Elongation factor G, domain IV SH02_RS20910 PF00177 Ribosomal protein S7p/S5e SH02_RS20915 PF00164 Ribosomal protein S12/S23 SH02_RS20920 PF04077 DsrH like protein SH02_RS20925 PF02635 DsrE/DsrF-like family SH02_RS20930 PF02635 DsrE/DsrF-like family SH02_RS20935 PF13309 HTH domain SH02_RS20935 PF08348 YheO-like PAS domain SH02_RS20940 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SH02_RS20940 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase SH02_RS20945 PF04102 SlyX SH02_RS20950 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SH02_RS20955 PF09526 Probable metal-binding protein (DUF2387) SH02_RS20960 PF00999 Sodium/hydrogen exchanger family SH02_RS20960 PF02254 TrkA-N domain SH02_RS20965 PF02525 Flavodoxin-like fold SH02_RS20970 PF12848 ABC transporter SH02_RS20970 PF00005 ABC transporter SH02_RS20975 PF00561 alpha/beta hydrolase fold SH02_RS20980 PF06794 Uncharacterised protein family (UPF0270) SH02_RS20985 PF00485 Phosphoribulokinase / Uridine kinase family SH02_RS20990 PF02566 OsmC-like protein SH02_RS21000 PF13545 Crp-like helix-turn-helix domain SH02_RS21000 PF00027 Cyclic nucleotide-binding domain SH02_RS21005 PF12805 FUSC-like inner membrane protein yccS SH02_RS21010 PF00202 Aminotransferase class-III SH02_RS21015 PF00117 Glutamine amidotransferase class-I SH02_RS21020 PF02661 Fic/DOC family SH02_RS21025 PF10832 Protein of unknown function (DUF2559) SH02_RS21030 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SH02_RS21035 PF07690 Major Facilitator Superfamily SH02_RS21040 PF18267 Rubredoxin NAD+ reductase C-terminal domain SH02_RS21040 PF07992 Pyridine nucleotide-disulphide oxidoreductase SH02_RS21040 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SH02_RS21040 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SH02_RS21040 PF04324 BFD-like [2Fe-2S] binding domain SH02_RS21045 PF13806 Rieske-like [2Fe-2S] domain SH02_RS21050 PF01226 Formate/nitrite transporter SH02_RS21055 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SH02_RS21055 PF10414 Sirohaem synthase dimerisation region SH02_RS21055 PF14824 Sirohaem biosynthesis protein central SH02_RS21060 PF13978 Protein of unknown function (DUF4223) SH02_RS21065 PF13520 Amino acid permease SH02_RS21070 PF01380 SIS domain SH02_RS21075 PF01261 Xylose isomerase-like TIM barrel SH02_RS21080 PF00294 pfkB family carbohydrate kinase SH02_RS21085 PF00392 Bacterial regulatory proteins, gntR family SH02_RS21085 PF07702 UTRA domain SH02_RS21090 PF00155 Aminotransferase class I and II SH02_RS21095 PF10797 Protein of unknown function SH02_RS21100 PF10941 Protein of unknown function DUF2620 SH02_RS21105 PF02126 Phosphotriesterase family SH02_RS21110 PF01676 Metalloenzyme superfamily SH02_RS21115 PF01168 Alanine racemase, N-terminal domain SH02_RS21125 PF14503 YhfZ C-terminal domain SH02_RS21125 PF14502 Helix-turn-helix domain SH02_RS21130 PF00579 tRNA synthetases class I (W and Y) SH02_RS21135 PF13419 Haloacid dehalogenase-like hydrolase SH02_RS21140 PF00834 Ribulose-phosphate 3 epimerase family SH02_RS21145 PF02086 D12 class N6 adenine-specific DNA methyltransferase SH02_RS21150 PF05036 Sporulation related domain SH02_RS21155 PF01761 3-dehydroquinate synthase SH02_RS21160 PF01202 Shikimate kinase SH02_RS21165 PF03958 Bacterial type II/III secretion system short domain SH02_RS21165 PF00263 Bacterial type II and III secretion system protein SH02_RS21170 PF10748 DNA utilization proteins HofP SH02_RS21180 PF05137 Fimbrial assembly protein (PilN) SH02_RS21190 PF17092 Penicillin-binding protein OB-like domain SH02_RS21190 PF00912 Transglycosylase SH02_RS21190 PF00905 Penicillin binding protein transpeptidase domain SH02_RS21195 PF00293 NUDIX domain SH02_RS21200 PF07095 Intracellular growth attenuator protein IgaA SH02_RS21205 PF13419 Haloacid dehalogenase-like hydrolase SH02_RS21210 PF01479 S4 domain SH02_RS21215 PF01430 Hsp33 protein SH02_RS21220 PF13687 Domain of unknown function (DUF4153) SH02_RS21230 PF01293 Phosphoenolpyruvate carboxykinase SH02_RS21235 PF00672 HAMP domain SH02_RS21235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SH02_RS21235 PF00512 His Kinase A (phospho-acceptor) domain SH02_RS21240 PF00072 Response regulator receiver domain SH02_RS21240 PF00486 Transcriptional regulatory protein, C terminal SH02_RS21245 PF01272 Transcription elongation factor, GreA/GreB, C-term SH02_RS21245 PF03449 Transcription elongation factor, N-terminal SH02_RS21250 PF09371 Tex-like protein N-terminal domain SH02_RS21250 PF00575 S1 RNA binding domain SH02_RS21250 PF17674 HHH domain SH02_RS21250 PF16921 Tex protein YqgF-like domain SH02_RS21255 PF04023 FeoA domain SH02_RS21260 PF17910 FeoB cytosolic helical domain SH02_RS21260 PF02421 Ferrous iron transport protein B SH02_RS21260 PF07670 Nucleoside recognition SH02_RS21260 PF07664 Ferrous iron transport protein B C terminus SH02_RS21265 PF09012 FeoC like transcriptional regulator SH02_RS21270 PF04754 Putative transposase, YhgA-like SH02_RS21275 PF00561 alpha/beta hydrolase fold SH02_RS21280 PF00156 Phosphoribosyl transferase domain SH02_RS21285 PF01521 Iron-sulphur cluster biosynthesis SH02_RS21285 PF01106 NifU-like domain SH02_RS21290 PF02447 GntP family permease SH02_RS21295 PF02446 4-alpha-glucanotransferase SH02_RS21300 PF00343 Carbohydrate phosphorylase SH02_RS21305 PF00196 Bacterial regulatory proteins, luxR family SH02_RS21305 PF17874 MalT-like TPR region SH02_RS21310 PF01137 RNA 3'-terminal phosphate cyclase SH02_RS21310 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain SH02_RS21315 PF01139 tRNA-splicing ligase RtcB SH02_RS21320 PF00158 Sigma-54 interaction domain SH02_RS21320 PF06956 Regulator of RNA terminal phosphate cyclase SH02_RS21325 PF08220 DeoR-like helix-turn-helix domain SH02_RS21325 PF00455 DeoR C terminal sensor domain SH02_RS21330 PF01694 Rhomboid family SH02_RS21330 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease SH02_RS21335 PF00581 Rhodanese-like domain SH02_RS21340 PF16901 C-terminal domain of alpha-glycerophosphate oxidase SH02_RS21340 PF01266 FAD dependent oxidoreductase SH02_RS21350 PF00343 Carbohydrate phosphorylase SH02_RS21355 PF08323 Starch synthase catalytic domain SH02_RS21355 PF00534 Glycosyl transferases group 1 SH02_RS21360 PF00483 Nucleotidyl transferase SH02_RS21365 PF18390 Glycogen debranching enzyme C-terminal domain SH02_RS21365 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SH02_RS21365 PF00128 Alpha amylase, catalytic domain SH02_RS21370 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SH02_RS21370 PF02806 Alpha amylase, C-terminal all-beta domain SH02_RS21370 PF00128 Alpha amylase, catalytic domain SH02_RS21375 PF01118 Semialdehyde dehydrogenase, NAD binding domain SH02_RS21375 PF02774 Semialdehyde dehydrogenase, dimerisation domain SH02_RS21380 PF01914 MarC family integral membrane protein SH02_RS21385 PF02447 GntP family permease SH02_RS21390 PF01202 Shikimate kinase SH02_RS21395 PF00356 Bacterial regulatory proteins, lacI family SH02_RS21395 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SH02_RS21400 PF17954 Quercetinase C-terminal cupin domain SH02_RS21400 PF02678 Pirin SH02_RS21405 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SH02_RS21405 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SH02_RS21410 PF00583 Acetyltransferase (GNAT) family SH02_RS21415 PF05638 Type VI secretion system effector, Hcp SH02_RS21425 PF03400 IS1 transposase SH02_RS21430 PF15567 Immunity protein 35 SH02_RS21440 PF10956 Protein of unknown function (DUF2756) SH02_RS21445 PF03009 Glycerophosphoryl diester phosphodiesterase family SH02_RS21450 PF17912 MalK OB fold domain SH02_RS21450 PF00005 ABC transporter SH02_RS21455 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS21460 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS21465 PF13416 Bacterial extracellular solute-binding protein SH02_RS21475 PF00005 ABC transporter SH02_RS21480 PF00005 ABC transporter SH02_RS21480 PF12399 Branched-chain amino acid ATP-binding cassette transporter SH02_RS21485 PF02653 Branched-chain amino acid transport system / permease component SH02_RS21485 PF11862 Domain of unknown function (DUF3382) SH02_RS21490 PF02653 Branched-chain amino acid transport system / permease component SH02_RS21495 PF13458 Periplasmic binding protein SH02_RS21500 PF12568 Acetyltransferase (GNAT) domain, PanZ SH02_RS21510 PF13458 Periplasmic binding protein SH02_RS21515 PF04542 Sigma-70 region 2 SH02_RS21515 PF04545 Sigma-70, region 4 SH02_RS21520 PF02687 FtsX-like permease family SH02_RS21520 PF18075 FtsX extracellular domain SH02_RS21525 PF00005 ABC transporter SH02_RS21530 PF00448 SRP54-type protein, GTPase domain SH02_RS21530 PF02881 SRP54-type protein, helical bundle domain SH02_RS21540 PF06611 Protein of unknown function (DUF1145) SH02_RS21545 PF10694 Protein of unknown function (DUF2500) SH02_RS21550 PF07947 YhhN family SH02_RS21555 PF00403 Heavy-metal-associated domain SH02_RS21560 PF01206 Sulfurtransferase TusA SH02_RS21565 PF02592 Putative vitamin uptake transporter SH02_RS21570 PF08786 DcrB SH02_RS21575 PF07690 Major Facilitator Superfamily SH02_RS21580 PF01594 AI-2E family transporter SH02_RS21585 PF01648 4'-phosphopantetheinyl transferase superfamily SH02_RS21590 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SH02_RS21595 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS21600 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS21605 PF00005 ABC transporter SH02_RS21610 PF00005 ABC transporter SH02_RS21615 PF01402 Ribbon-helix-helix protein, copG family SH02_RS21615 PF08753 NikR C terminal nickel binding domain SH02_RS21620 PF05593 RHS Repeat SH02_RS21620 PF03527 RHS protein SH02_RS21620 PF14220 Domain of unknown function (DUF4329) SH02_RS21625 PF15631 NTF2 fold immunity protein SH02_RS21635 PF01609 Transposase DDE domain SH02_RS21635 PF13808 DDE_Tnp_1-associated SH02_RS21645 PF00005 ABC transporter SH02_RS21650 PF13533 Biotin-lipoyl like SH02_RS21655 PF13258 Domain of unknown function (DUF4049) SH02_RS21675 PF10951 Protein of unknown function (DUF2776) SH02_RS21685 PF01384 Phosphate transporter family SH02_RS21690 PF10625 Universal stress protein B (UspB) SH02_RS21695 PF00582 Universal stress protein family SH02_RS21700 PF00854 POT family SH02_RS21705 PF04445 Putative SAM-dependent methyltransferase SH02_RS21710 PF01432 Peptidase family M3 SH02_RS21715 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ SH02_RS21720 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SH02_RS21720 PF07992 Pyridine nucleotide-disulphide oxidoreductase SH02_RS21735 PF01022 Bacterial regulatory protein, arsR family SH02_RS21740 PF02040 Arsenical pump membrane protein SH02_RS21745 PF03960 ArsC family SH02_RS21755 PF05598 Transposase domain (DUF772) SH02_RS21755 PF01609 Transposase DDE domain SH02_RS21765 PF03843 Outer membrane lipoprotein Slp family SH02_RS21770 PF00196 Bacterial regulatory proteins, luxR family SH02_RS21775 PF02308 MgtC family SH02_RS21780 PF06411 HdeA/HdeB family SH02_RS21785 PF06411 HdeA/HdeB family SH02_RS21790 PF03729 Short repeat of unknown function (DUF308) SH02_RS21795 PF00196 Bacterial regulatory proteins, luxR family SH02_RS21805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SH02_RS21805 PF00529 HlyD membrane-fusion protein of T1SS SH02_RS21810 PF00873 AcrB/AcrD/AcrF family SH02_RS21815 PF12833 Helix-turn-helix domain SH02_RS21820 PF12833 Helix-turn-helix domain SH02_RS21825 PF00282 Pyridoxal-dependent decarboxylase conserved domain SH02_RS21830 PF00034 Cytochrome c SH02_RS21830 PF14376 Haem-binding domain SH02_RS21830 PF03150 Di-haem cytochrome c peroxidase SH02_RS21835 PF01204 Trehalase SH02_RS21840 PF00196 Bacterial regulatory proteins, luxR family SH02_RS21845 PF03466 LysR substrate binding domain SH02_RS21845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS21850 PF03631 Virulence factor BrkB SH02_RS21855 PF07690 Major Facilitator Superfamily SH02_RS21855 PF00083 Sugar (and other) transporter SH02_RS21860 PF05170 AsmA family SH02_RS21865 PF00563 EAL domain SH02_RS21875 PF00294 pfkB family carbohydrate kinase SH02_RS21880 PF00675 Insulinase (Peptidase family M16) SH02_RS21880 PF05193 Peptidase M16 inactive domain SH02_RS21885 PF00375 Sodium:dicarboxylate symporter family SH02_RS21890 PF00672 HAMP domain SH02_RS21890 PF17154 Gammaproteobacterial periplasmic sensor domain SH02_RS21890 PF00990 Diguanylate cyclase, GGDEF domain SH02_RS21890 PF00563 EAL domain SH02_RS21895 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) SH02_RS21900 PF01270 Glycosyl hydrolases family 8 SH02_RS21905 PF03170 Bacterial cellulose synthase subunit SH02_RS21910 PF03552 Cellulose synthase SH02_RS21910 PF00535 Glycosyl transferase family 2 SH02_RS21910 PF07238 PilZ domain SH02_RS21915 PF06564 Cellulose biosynthesis protein BcsQ SH02_RS21920 PF10945 Cellulose biosynthesis protein BcsR SH02_RS21925 PF01609 Transposase DDE domain SH02_RS21925 PF05598 Transposase domain (DUF772) SH02_RS21930 PF10995 Cellulose biosynthesis GIL SH02_RS21935 PF11120 Cellulose biosynthesis protein BcsF SH02_RS21940 PF11658 Cellulose biosynthesis protein BcsG SH02_RS21945 PF13940 Toxin Ldr, type I toxin-antitoxin system SH02_RS21955 PF03222 Tryptophan/tyrosine permease family SH02_RS21960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SH02_RS21960 PF00005 ABC transporter SH02_RS21965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SH02_RS21965 PF00005 ABC transporter SH02_RS21970 PF12911 N-terminal TM domain of oligopeptide transport permease C SH02_RS21970 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS21975 PF00528 Binding-protein-dependent transport system inner membrane component SH02_RS21985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SH02_RS22000 PF00884 Sulfatase SH02_RS22000 PF08019 Phosphoethanolamine transferase EptA/EptB SH02_RS22005 PF07690 Major Facilitator Superfamily SH02_RS22010 PF03797 Autotransporter beta-domain SH02_RS22015 PF03352 Methyladenine glycosylase SH02_RS22020 PF00583 Acetyltransferase (GNAT) family SH02_RS22025 PF00384 Molybdopterin oxidoreductase SH02_RS22025 PF18364 Molybdopterin oxidoreductase N-terminal domain SH02_RS22025 PF01568 Molydopterin dinucleotide binding domain SH02_RS22030 PF00691 OmpA family SH02_RS22030 PF13488 Glycine zipper SH02_RS22035 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SH02_RS22035 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SH02_RS22040 PF11254 Protein of unknown function (DUF3053) SH02_RS22045 PF01381 Helix-turn-helix SH02_RS22050 PF00313 'Cold-shock' DNA-binding domain SH02_RS22055 PF01848 Hok/gef family SH02_RS22065 PF00665 Integrase core domain SH02_RS22065 PF13276 HTH-like domain SH02_RS22065 PF13333 Integrase core domain SH02_RS22070 PF05746 DALR anticodon binding domain SH02_RS22070 PF02092 Glycyl-tRNA synthetase beta subunit SH02_RS22075 PF02091 Glycyl-tRNA synthetase alpha subunit SH02_RS22080 PF13983 YsaB-like lipoprotein SH02_RS22085 PF01757 Acyltransferase family SH02_RS22090 PF05360 yiaA/B two helix domain SH02_RS22095 PF05360 yiaA/B two helix domain SH02_RS22100 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SH02_RS22100 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SH02_RS22110 PF13407 Periplasmic binding protein domain SH02_RS22115 PF03400 IS1 transposase SH02_RS22120 PF13407 Periplasmic binding protein domain SH02_RS22125 PF00005 ABC transporter SH02_RS22130 PF02653 Branched-chain amino acid transport system / permease component SH02_RS22135 PF12833 Helix-turn-helix domain SH02_RS22140 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SH02_RS22145 PF00128 Alpha amylase, catalytic domain SH02_RS22150 PF00155 Aminotransferase class I and II SH02_RS22160 PF13247 4Fe-4S dicluster domain SH02_RS22165 PF01614 Bacterial transcriptional regulator SH02_RS22165 PF09339 IclR helix-turn-helix domain SH02_RS22170 PF02615 Malate/L-lactate dehydrogenase SH02_RS22175 PF04074 YhcH/YjgK/YiaL SH02_RS22180 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component SH02_RS22185 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component SH02_RS22190 PF03480 Bacterial extracellular solute-binding protein, family 7 SH02_RS22195 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SH02_RS22195 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SH02_RS22200 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SH02_RS22205 PF01261 Xylose isomerase-like TIM barrel SH02_RS22210 PF00596 Class II Aldolase and Adducin N-terminal domain SH02_RS22215 PF06629 MltA-interacting protein MipA SH02_RS22220 PF03466 LysR substrate binding domain SH02_RS22220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SH02_RS22225 PF00529 HlyD membrane-fusion protein of T1SS SH02_RS22225 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SH02_RS22230 PF11742 Protein of unknown function (DUF3302) SH02_RS22240 PF00171 Aldehyde dehydrogenase family SH02_RS22245 PF00465 Iron-containing alcohol dehydrogenase SH02_RS22250 PF00009 Elongation factor Tu GTP binding domain SH02_RS22250 PF03144 Elongation factor Tu domain 2 SH02_RS22250 PF09107 Elongation factor SelB, winged helix SH02_RS22250 PF09106 Elongation factor SelB, winged helix SH02_RS22255 PF12390 Selenocysteine synthase N terminal SH02_RS22255 PF03841 L-seryl-tRNA selenium transferase SH02_RS22260 PF13417 Glutathione S-transferase, N-terminal domain SH02_RS22260 PF00043 Glutathione S-transferase, C-terminal domain SH02_RS22265 PF15606 Bacterial toxin 34 SH02_RS22265 PF03527 RHS protein SH02_RS22265 PF05593 RHS Repeat SH02_RS22270 PF03130 PBS lyase HEAT-like repeat SH02_RS22275 PF03527 RHS protein SH02_RS22290 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SH02_RS22290 PF00529 HlyD membrane-fusion protein of T1SS SH02_RS22295 PF11742 Protein of unknown function (DUF3302) SH02_RS22305 PF01232 Mannitol dehydrogenase Rossmann domain SH02_RS22305 PF08125 Mannitol dehydrogenase C-terminal domain SH02_RS22310 PF05068 Mannitol repressor SH02_RS22320 PF10928 Protein of unknown function (DUF2810) SH02_RS22325 PF02652 L-lactate permease SH02_RS22330 PF00392 Bacterial regulatory proteins, gntR family SH02_RS22330 PF07729 FCD domain SH02_RS22335 PF01070 FMN-dependent dehydrogenase SH02_RS22340 PF00588 SpoU rRNA Methylase family SH02_RS22345 PF00132 Bacterial transferase hexapeptide (six repeats) SH02_RS22345 PF06426 Serine acetyltransferase, N-terminal SH02_RS22350 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SH02_RS22350 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SH02_RS22355 PF02556 Preprotein translocase subunit SecB SH02_RS22360 PF00462 Glutaredoxin SH02_RS22365 PF00581 Rhodanese-like domain SH02_RS22370 PF06415 BPG-independent PGAM N-terminus (iPGM_N) SH02_RS22370 PF01676 Metalloenzyme superfamily SH02_RS22375 PF01551 Peptidase family M23 SH02_RS22380 PF04748 Divergent polysaccharide deacetylase SH02_RS22385 PF00535 Glycosyl transferase family 2 SH02_RS22390 PF00107 Zinc-binding dehydrogenase SH02_RS22390 PF08240 Alcohol dehydrogenase GroES-like domain SH02_RS22395 PF00155 Aminotransferase class I and II SH02_RS22400 PF09612 Bacterial protein of unknown function (HtrL_YibB) SH02_RS22405 PF01370 NAD dependent epimerase/dehydratase family SH02_RS22410 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SH02_RS22415 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SH02_RS22420 PF04932 O-Antigen ligase SH02_RS22425 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SH02_RS22435 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) SH02_RS22440 PF08437 Glycosyl transferase family 8 C-terminal SH02_RS22440 PF01501 Glycosyl transferase family 8 SH02_RS22445 PF01501 Glycosyl transferase family 8 SH02_RS22445 PF08437 Glycosyl transferase family 8 C-terminal SH02_RS22450 PF00534 Glycosyl transferases group 1 SH02_RS22450 PF13439 Glycosyltransferase Family 4 SH02_RS22465 PF13439 Glycosyltransferase Family 4 SH02_RS22465 PF00534 Glycosyl transferases group 1 SH02_RS22470 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SH02_RS22475 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) SH02_RS22480 PF01467 Cytidylyltransferase-like SH02_RS22485 PF06827 Zinc finger found in FPG and IleRS SH02_RS22485 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SH02_RS22485 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SH02_RS22490 PF00471 Ribosomal protein L33 SH02_RS22495 PF00830 Ribosomal L28 family SH02_RS22500 PF04002 RadC-like JAB domain SH02_RS22505 PF02441 Flavoprotein SH02_RS22505 PF04127 DNA / pantothenate metabolism flavoprotein SH02_RS22510 PF00692 dUTPase SH02_RS22515 PF00440 Bacterial regulatory proteins, tetR family SH02_RS22520 PF00156 Phosphoribosyl transferase domain SH02_RS22525 PF03725 3' exoribonuclease family, domain 2 SH02_RS22525 PF01138 3' exoribonuclease family, domain 1 SH02_RS22530 PF08340 Domain of unknown function (DUF1732) SH02_RS22530 PF03755 YicC-like family, N-terminal region SH02_RS22540 PF03458 UPF0126 domain SH02_RS22545 PF03120 NAD-dependent DNA ligase OB-fold domain SH02_RS22545 PF01653 NAD-dependent DNA ligase adenylation domain SH02_RS22550 PF00625 Guanylate kinase SH02_RS22555 PF01192 RNA polymerase Rpb6 SH02_RS22560 PF04607 Region found in RelA / SpoT proteins SH02_RS22560 PF13291 ACT domain SH02_RS22560 PF02824 TGS domain SH02_RS22565 PF12105 SpoU, rRNA methylase, C-terminal SH02_RS22565 PF00588 SpoU rRNA Methylase family SH02_RS22570 PF00270 DEAD/DEAH box helicase SH02_RS22570 PF00271 Helicase conserved C-terminal domain SH02_RS22570 PF17191 RecG wedge domain SH02_RS22575 PF03616 Sodium/glutamate symporter SH02_RS22580 PF00860 Permease family SH02_RS22585 PF05170 AsmA family SH02_RS22590 PF01055 Glycosyl hydrolases family 31 SH02_RS22590 PF13802 Galactose mutarotase-like SH02_RS22610 PF07690 Major Facilitator Superfamily SH02_RS22615 PF00892 EamA-like transporter family SH02_RS22620 PF03180 NLPA lipoprotein SH02_RS22635 PF07690 Major Facilitator Superfamily SH02_RS22640 PF06711 Protein of unknown function (DUF1198) SH02_RS22645 PF00860 Permease family SH02_RS22650 PF13382 Adenine deaminase C-terminal domain SH02_RS22650 PF01979 Amidohydrolase family SH02_RS22655 PF07690 Major Facilitator Superfamily SH02_RS22660 PF07690 Major Facilitator Superfamily SH02_RS22665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SH02_RS22665 PF05231 MASE1 SH02_RS22665 PF07730 Histidine kinase SH02_RS22670 PF00196 Bacterial regulatory proteins, luxR family SH02_RS22670 PF00072 Response regulator receiver domain SH02_RS22675 PF01842 ACT domain SH02_RS22680 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SH02_RS22680 PF00205 Thiamine pyrophosphate enzyme, central domain SH02_RS22680 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SH02_RS22685 PF08049 IlvB leader peptide SH02_RS22700 PF13939 Toxin TisB, type I toxin-antitoxin system SH02_RS22705 PF07690 Major Facilitator Superfamily SH02_RS22715 PF02656 Domain of unknown function (DUF202) SH02_RS22720 PF02656 Domain of unknown function (DUF202) SH02_RS22730 PF16347 Domain of unknown function (DUF4976) SH02_RS22730 PF00884 Sulfatase SH02_RS22735 PF00474 Sodium:solute symporter family SH02_RS22740 PF02311 AraC-like ligand binding domain SH02_RS22740 PF12833 Helix-turn-helix domain SH02_RS22745 PF02056 Family 4 glycosyl hydrolase SH02_RS22750 PF00367 phosphotransferase system, EIIB SH02_RS22755 PF02378 Phosphotransferase system, EIIC SH02_RS22760 PF07702 UTRA domain SH02_RS22760 PF00392 Bacterial regulatory proteins, gntR family SH02_RS22765 PF06826 Predicted Permease Membrane Region SH02_RS22765 PF02080 TrkA-C domain SH02_RS22770 PF00011 Hsp20/alpha crystallin family SH02_RS22775 PF00011 Hsp20/alpha crystallin family SH02_RS22780 PF07119 Protein of unknown function (DUF1375) SH02_RS22785 PF07676 WD40-like Beta Propeller Repeat SH02_RS22785 PF12566 Protein of unknown function (DUF3748) SH02_RS22790 PF01494 FAD binding domain SH02_RS22795 PF07690 Major Facilitator Superfamily SH02_RS22800 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SH02_RS22800 PF13378 Enolase C-terminal domain-like SH02_RS22805 PF01081 KDPG and KHG aldolase SH02_RS22810 PF05035 2-keto-3-deoxy-galactonokinase SH02_RS22815 PF00392 Bacterial regulatory proteins, gntR family SH02_RS22815 PF07729 FCD domain SH02_RS22830 PF06078 Bacterial protein of unknown function (DUF937) SH02_RS22840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SH02_RS22840 PF18053 DNA gyrase B subunit insert domain SH02_RS22840 PF00986 DNA gyrase B subunit, carboxyl terminus SH02_RS22840 PF00204 DNA gyrase B SH02_RS22840 PF01751 Toprim domain SH02_RS22845 PF02463 RecF/RecN/SMC N terminal domain SH02_RS22850 PF02767 DNA polymerase III beta subunit, central domain SH02_RS22850 PF02768 DNA polymerase III beta subunit, C-terminal domain SH02_RS22850 PF00712 DNA polymerase III beta subunit, N-terminal domain SH02_RS22855 PF11638 DnaA N-terminal domain SH02_RS22855 PF08299 Bacterial dnaA protein helix-turn-helix SH02_RS22855 PF00308 Bacterial dnaA protein SH02_RS22915 PF03400 IS1 transposase SH02_RS22925 PF07151 Protein of unknown function (DUF1391) SH02_RS22935 PF00871 Acetokinase family