SH08_RS00005	PF00468	Ribosomal protein L34
SH08_RS00010	PF00825	Ribonuclease P
SH08_RS00015	PF01809	SH08_RS00015
SH08_RS00020	PF02096	60Kd inner membrane protein
SH08_RS00020	PF14849	YidC periplasmic domain
SH08_RS00025	PF01926	50S ribosome-binding GTPase
SH08_RS00025	PF10396	GTP-binding protein TrmE N-terminus
SH08_RS00025	PF12631	Catalytic cysteine-containing C-terminus of GTPase, MnmE
SH08_RS00030	PF08053	SH08_RS00030
SH08_RS00035	PF01212	Beta-eliminating lyase
SH08_RS00040	PF03222	Tryptophan/tyrosine permease family
SH08_RS00045	PF07690	Major Facilitator Superfamily
SH08_RS00050	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS00050	PF03466	LysR substrate binding domain
SH08_RS00060	PF03358	NADPH-dependent FMN reductase
SH08_RS00065	PF00860	Permease family
SH08_RS00070	PF13419	Haloacid dehalogenase-like hydrolase
SH08_RS00080	PF03691	SH08_RS00080
SH08_RS00085	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
SH08_RS00090	PF00756	Putative esterase
SH08_RS00090	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
SH08_RS00095	PF02264	LamB porin
SH08_RS00095	PF11471	SH08_RS00095
SH08_RS00100	PF00232	Glycosyl hydrolase family 1
SH08_RS00105	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
SH08_RS00105	PF00367	phosphotransferase system, EIIB
SH08_RS00105	PF02378	Phosphotransferase system, EIIC
SH08_RS00110	PF00874	PRD domain
SH08_RS00110	PF03123	CAT RNA binding domain
SH08_RS00115	PF01895	PhoU domain
SH08_RS00120	PF00005	ABC transporter
SH08_RS00125	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS00130	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS00135	PF12849	PBP superfamily domain
SH08_RS00140	PF04754	SH08_RS00140
SH08_RS00145	PF01380	SIS domain
SH08_RS00145	PF13522	Glutamine amidotransferase domain
SH08_RS00150	PF00132	Bacterial transferase hexapeptide (six repeats)
SH08_RS00150	PF12804	MobA-like NTP transferase domain
SH08_RS00155	PF00401	ATP synthase, Delta/Epsilon chain, long alpha-helix domain
SH08_RS00155	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
SH08_RS00160	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
SH08_RS00160	PF02874	ATP synthase alpha/beta family, beta-barrel domain
SH08_RS00165	PF00231	ATP synthase
SH08_RS00170	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
SH08_RS00170	PF00306	ATP synthase alpha/beta chain, C terminal domain
SH08_RS00170	PF02874	ATP synthase alpha/beta family, beta-barrel domain
SH08_RS00175	PF00213	ATP synthase delta (OSCP) subunit
SH08_RS00180	PF00430	ATP synthase B/B' CF(0)
SH08_RS00185	PF00137	ATP synthase subunit C
SH08_RS00190	PF00119	ATP synthase A chain
SH08_RS00195	PF03899	SH08_RS00195
SH08_RS00200	PF02527	rRNA small subunit methyltransferase G
SH08_RS00205	PF01134	Glucose inhibited division protein A
SH08_RS00205	PF13932	GidA associated domain 3
SH08_RS00210	PF00258	Flavodoxin
SH08_RS00215	PF01037	AsnC family
SH08_RS00215	PF13412	Winged helix-turn-helix DNA-binding
SH08_RS00220	PF03590	Aspartate-ammonia ligase
SH08_RS00225	PF05762	VWA domain containing CoxE-like protein
SH08_RS00230	PF07728	AAA domain (dynein-related subfamily)
SH08_RS00230	PF12592	Protein of unknown function (DUF3763)
SH08_RS00235	PF02705	SH08_RS00235
SH08_RS00240	PF05025	RbsD / FucU transport protein family
SH08_RS00245	PF00005	ABC transporter
SH08_RS00250	PF02653	SH08_RS00250
SH08_RS00255	PF13407	Periplasmic binding protein domain
SH08_RS00260	PF00294	pfkB family carbohydrate kinase
SH08_RS00265	PF00356	Bacterial regulatory proteins, lacI family
SH08_RS00265	PF13377	Periplasmic binding protein-like domain
SH08_RS00270	PF07690	Major Facilitator Superfamily
SH08_RS00275	PF00392	Bacterial regulatory proteins, gntR family
SH08_RS00275	PF07729	FCD domain
SH08_RS00310	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS00310	PF03466	LysR substrate binding domain
SH08_RS00315	PF04219	SH08_RS00315
SH08_RS00320	PF01078	Magnesium chelatase, subunit ChlI
SH08_RS00320	PF13335	SH08_RS00320
SH08_RS00320	PF13541	Subunit ChlI of Mg-chelatase
SH08_RS00325	PF08046	SH08_RS00325
SH08_RS00335	PF13710	ACT domain
SH08_RS00340	PF01063	Aminotransferase class IV
SH08_RS00345	PF00920	Dehydratase family
SH08_RS00350	PF00291	Pyridoxal-phosphate dependent enzyme
SH08_RS00350	PF00585	C-terminal regulatory domain of Threonine dehydratase
SH08_RS00355	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS00355	PF03466	LysR substrate binding domain
SH08_RS00360	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
SH08_RS00360	PF07991	Acetohydroxy acid isomeroreductase, catalytic domain
SH08_RS00365	PF13616	PPIC-type PPIASE domain
SH08_RS00375	PF00580	UvrD/REP helicase N-terminal domain
SH08_RS00375	PF13361	UvrD-like helicase C-terminal domain
SH08_RS00380	PF02541	Ppx/GppA phosphatase family
SH08_RS00385	PF00270	DEAD/DEAH box helicase
SH08_RS00385	PF00271	Helicase conserved C-terminal domain
SH08_RS00390	PF00085	Thioredoxin
SH08_RS00400	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
SH08_RS00400	PF07497	Rho termination factor, RNA-binding domain
SH08_RS00400	PF07498	Rho termination factor, N-terminal domain
SH08_RS00410	PF00953	Glycosyl transferase family 4
SH08_RS00415	PF02706	Chain length determinant protein
SH08_RS00420	PF02350	UDP-N-acetylglucosamine 2-epimerase
SH08_RS00425	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
SH08_RS00425	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
SH08_RS00425	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
SH08_RS00430	PF16363	SH08_RS00430
SH08_RS00435	PF00483	Nucleotidyl transferase
SH08_RS00445	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
SH08_RS00450	PF01943	SH08_RS00450
SH08_RS00455	PF07429	SH08_RS00455
SH08_RS00460	PF06899	SH08_RS00460
SH08_RS00465	PF03808	SH08_RS00465
SH08_RS00470	PF00324	Amino acid permease
SH08_RS00495	PF04055	Radical SAM superfamily
SH08_RS00495	PF13186	Iron-sulfur cluster-binding domain
SH08_RS00495	PF13353	4Fe-4S single cluster domain
SH08_RS00500	PF00884	Sulfatase
SH08_RS00505	PF07219	SH08_RS00505
SH08_RS00505	PF07719	Tetratricopeptide repeat
SH08_RS00510	PF04375	SH08_RS00510
SH08_RS00515	PF02602	Uroporphyrinogen-III synthase HemD
SH08_RS00520	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
SH08_RS00520	PF03900	Porphobilinogen deaminase, C-terminal domain
SH08_RS00525	PF01295	SH08_RS00525
SH08_RS00525	PF12633	SH08_RS00525
SH08_RS00530	PF01491	Frataxin-like domain
SH08_RS00535	PF13627	SH08_RS00535
SH08_RS00540	PF01678	Diaminopimelate epimerase
SH08_RS00545	PF04340	Protein of unknown function, DUF484
SH08_RS00550	PF00589	Phage integrase family
SH08_RS00550	PF02899	Phage integrase, N-terminal SAM-like domain
SH08_RS00555	PF13419	Haloacid dehalogenase-like hydrolase
SH08_RS00560	PF00580	UvrD/REP helicase N-terminal domain
SH08_RS00560	PF13361	UvrD-like helicase C-terminal domain
SH08_RS00565	PF09992	Predicted periplasmic protein (DUF2233)
SH08_RS00575	PF01544	CorA-like Mg2+ transporter protein
SH08_RS00580	PF10947	SH08_RS00580
SH08_RS00590	PF00892	EamA-like transporter family
SH08_RS00595	PF03061	Thioesterase superfamily
SH08_RS00600	PF02253	Phospholipase A1
SH08_RS00605	PF00270	DEAD/DEAH box helicase
SH08_RS00605	PF00271	Helicase conserved C-terminal domain
SH08_RS00605	PF00570	HRDC domain
SH08_RS00605	PF09382	RQC domain
SH08_RS00605	PF16124	SH08_RS00605
SH08_RS00610	PF01810	SH08_RS00610
SH08_RS00615	PF01810	SH08_RS00615
SH08_RS00620	PF12146	Putative lysophospholipase
SH08_RS00625	PF08282	haloacid dehalogenase-like hydrolase
SH08_RS00630	PF00892	EamA-like transporter family
SH08_RS00635	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS00635	PF03466	LysR substrate binding domain
SH08_RS00640	PF01717	Cobalamin-independent synthase, Catalytic domain
SH08_RS00640	PF08267	Cobalamin-independent synthase, N-terminal domain
SH08_RS00645	PF01738	Dienelactone hydrolase family
SH08_RS00650	PF01048	Phosphorylase superfamily
SH08_RS00655	PF02646	SH08_RS00655
SH08_RS00660	PF01209	ubiE/COQ5 methyltransferase family
SH08_RS00665	PF02036	SCP-2 sterol transfer family
SH08_RS00670	PF03109	SH08_RS00670
SH08_RS00675	PF02416	mttA/Hcf106 family
SH08_RS00685	PF00902	Sec-independent protein translocase protein (TatC)
SH08_RS00690	PF01026	TatD related DNase
SH08_RS00695	PF02357	Transcription termination factor nusG
SH08_RS00700	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
SH08_RS00705	PF00175	Oxidoreductase NAD-binding domain
SH08_RS00705	PF00970	Oxidoreductase FAD-binding domain
SH08_RS00710	PF00108	Thiolase, N-terminal domain
SH08_RS00710	PF02803	Thiolase, C-terminal domain
SH08_RS00715	PF00378	Enoyl-CoA hydratase/isomerase family
SH08_RS00715	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
SH08_RS00715	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
SH08_RS00720	PF00557	Metallopeptidase family M24
SH08_RS00725	PF01205	Uncharacterized protein family UPF0029
SH08_RS00725	PF09186	Domain of unknown function (DUF1949)
SH08_RS00730	PF02386	Cation transport protein
SH08_RS00735	PF12724	Flavodoxin domain
SH08_RS00765	PF03205	Molybdopterin guanine dinucleotide synthesis protein B
SH08_RS00770	PF12804	MobA-like NTP transferase domain
SH08_RS00775	PF06288	Protein of unknown function (DUF1040)
SH08_RS00780	PF01636	Phosphotransferase enzyme family
SH08_RS00785	PF01323	DSBA-like thioredoxin domain
SH08_RS00790	PF06097	SH08_RS00790
SH08_RS00795	PF01553	Acyltransferase
SH08_RS00805	PF00476	DNA polymerase family A
SH08_RS00805	PF01367	5'-3' exonuclease, C-terminal SAM fold
SH08_RS00805	PF01612	3'-5' exonuclease
SH08_RS00805	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
SH08_RS00810	PF01926	50S ribosome-binding GTPase
SH08_RS00815	PF04220	SH08_RS00815
SH08_RS00820	PF04055	Radical SAM superfamily
SH08_RS00820	PF06969	HemN C-terminal domain
SH08_RS00830	PF00072	Response regulator receiver domain
SH08_RS00830	PF00158	Sigma-54 interaction domain
SH08_RS00830	PF02954	Bacterial regulatory protein, Fis family
SH08_RS00835	PF00512	His Kinase A (phospho-acceptor) domain
SH08_RS00835	PF00989	PAS fold
SH08_RS00835	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH08_RS00840	PF00120	Glutamine synthetase, catalytic domain
SH08_RS00840	PF03951	Glutamine synthetase, beta-Grasp domain
SH08_RS00850	PF00009	Elongation factor Tu GTP binding domain
SH08_RS00850	PF00679	Elongation factor G C-terminus
SH08_RS00850	PF03144	Elongation factor Tu domain 2
SH08_RS00855	PF00392	Bacterial regulatory proteins, gntR family
SH08_RS00855	PF07702	UTRA domain
SH08_RS00860	PF01261	Xylose isomerase-like TIM barrel
SH08_RS00865	PF07690	Major Facilitator Superfamily
SH08_RS00870	PF06178	Oligogalacturonate-specific porin protein (KdgM)
SH08_RS00875	PF13347	MFS/sugar transport protein
SH08_RS00880	PF13347	MFS/sugar transport protein
SH08_RS00885	PF01055	Glycosyl hydrolases family 31
SH08_RS00890	PF01263	Aldose 1-epimerase
SH08_RS00895	PF07221	N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
SH08_RS00900	PF01791	DeoC/LacD family aldolase
SH08_RS00905	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
SH08_RS00905	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
SH08_RS00910	PF00294	pfkB family carbohydrate kinase
SH08_RS00915	PF00455	SH08_RS00915
SH08_RS00915	PF08220	DeoR-like helix-turn-helix domain
SH08_RS00920	PF13419	Haloacid dehalogenase-like hydrolase
SH08_RS00925	PF03631	SH08_RS00925
SH08_RS00930	PF02580	D-Tyr-tRNA(Tyr) deacylase
SH08_RS00935	PF09500	Putative thioesterase (yiiD_Cterm)
SH08_RS00935	PF13673	Acetyltransferase (GNAT) domain
SH08_RS00940	PF01402	Ribbon-helix-helix protein, copG family
SH08_RS00950	PF12035	SH08_RS00950
SH08_RS00955	PF04216	Protein involved in formate dehydrogenase formation
SH08_RS00960	PF01292	Prokaryotic cytochrome b561
SH08_RS00965	PF09163	Formate dehydrogenase N, transmembrane
SH08_RS00965	PF13247	4Fe-4S dicluster domain
SH08_RS00970	PF00384	Molybdopterin oxidoreductase
SH08_RS00970	PF01568	Molydopterin dinucleotide binding domain
SH08_RS00975	PF00384	Molybdopterin oxidoreductase
SH08_RS00975	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
SH08_RS00980	PF02634	FdhD/NarQ family
SH08_RS00985	PF12889	Protein of unknown function (DUF3829)
SH08_RS00990	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
SH08_RS00990	PF08279	HTH domain
SH08_RS00995	PF05343	M42 glutamyl aminopeptidase
SH08_RS01000	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
SH08_RS01000	PF02378	Phosphotransferase system, EIIC
SH08_RS01005	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
SH08_RS01010	PF05336	Domain of unknown function (DUF718)
SH08_RS01015	PF00596	Class II Aldolase and Adducin N-terminal domain
SH08_RS01020	PF06134	L-rhamnose isomerase (RhaA)
SH08_RS01025	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
SH08_RS01025	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
SH08_RS01035	PF02311	AraC-like ligand binding domain
SH08_RS01035	PF12833	Helix-turn-helix domain
SH08_RS01040	PF02311	AraC-like ligand binding domain
SH08_RS01040	PF12833	Helix-turn-helix domain
SH08_RS01045	PF06379	SH08_RS01045
SH08_RS01050	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
SH08_RS01050	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
SH08_RS01060	PF03812	SH08_RS01060
SH08_RS01065	PF03473	MOSC domain
SH08_RS01065	PF03475	3-alpha domain
SH08_RS01070	PF00512	His Kinase A (phospho-acceptor) domain
SH08_RS01070	PF00672	HAMP domain
SH08_RS01070	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH08_RS01070	PF16527	SH08_RS01070
SH08_RS01075	PF00072	Response regulator receiver domain
SH08_RS01075	PF00486	Transcriptional regulatory protein, C terminal
SH08_RS01080	PF07813	LTXXQ motif family protein
SH08_RS01085	PF01545	Cation efflux family
SH08_RS01085	PF16916	SH08_RS01085
SH08_RS01090	PF00365	Phosphofructokinase
SH08_RS01095	PF13531	Bacterial extracellular solute-binding protein
SH08_RS01100	PF02611	CDP-diacylglycerol pyrophosphatase
SH08_RS01105	PF00121	Triosephosphate isomerase
SH08_RS01110	PF07305	SH08_RS01110
SH08_RS01115	PF05656	SH08_RS01115
SH08_RS01120	PF04175	Protein of unknown function (DUF406)
SH08_RS01125	PF00582	Universal stress protein family
SH08_RS01130	PF00175	Oxidoreductase NAD-binding domain
SH08_RS01130	PF00970	Oxidoreductase FAD-binding domain
SH08_RS01135	PF03320	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
SH08_RS01140	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
SH08_RS01140	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
SH08_RS01145	PF00230	Major intrinsic protein
SH08_RS01150	PF06005	Protein of unknown function (DUF904)
SH08_RS01155	PF03737	Demethylmenaquinone methyltransferase
SH08_RS01160	PF01040	UbiA prenyltransferase family
SH08_RS01165	PF00004	ATPase family associated with various cellular activities (AAA)
SH08_RS01165	PF07724	AAA domain (Cdc48 subfamily)
SH08_RS01165	PF10431	C-terminal, D2-small domain, of ClpB protein
SH08_RS01170	PF00227	Proteasome subunit
SH08_RS01175	PF05036	Sporulation related domain
SH08_RS01180	PF00356	Bacterial regulatory proteins, lacI family
SH08_RS01180	PF13377	Periplasmic binding protein-like domain
SH08_RS01185	PF00270	DEAD/DEAH box helicase
SH08_RS01185	PF00271	Helicase conserved C-terminal domain
SH08_RS01190	PF01197	Ribosomal protein L31
SH08_RS01195	PF05708	Orthopoxvirus protein of unknown function (DUF830)
SH08_RS01200	PF01340	Met Apo-repressor, MetJ
SH08_RS01210	PF00696	Amino acid kinase family
SH08_RS01210	PF00742	Homoserine dehydrogenase
SH08_RS01210	PF03447	Homoserine dehydrogenase, NAD binding domain
SH08_RS01220	PF02219	Methylenetetrahydrofolate reductase
SH08_RS01225	PF00141	Peroxidase
SH08_RS01230	PF00892	EamA-like transporter family
SH08_RS01235	PF06940	SH08_RS01235
SH08_RS01240	PF12035	SH08_RS01240
SH08_RS01245	PF00465	Iron-containing alcohol dehydrogenase
SH08_RS01250	PF00923	Transaldolase
SH08_RS01255	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
SH08_RS01255	PF00381	PTS HPr component phosphorylation site
SH08_RS01255	PF00391	PEP-utilising enzyme, mobile domain
SH08_RS01255	PF02896	PEP-utilising enzyme, TIM barrel domain
SH08_RS01255	PF05524	PEP-utilising enzyme, N-terminal
SH08_RS01265	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
SH08_RS01270	PF01228	Glycine radical
SH08_RS01270	PF02901	Pyruvate formate lyase
SH08_RS01275	PF04055	Radical SAM superfamily
SH08_RS01275	PF13353	4Fe-4S single cluster domain
SH08_RS01280	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
SH08_RS01285	PF12833	Helix-turn-helix domain
SH08_RS01290	PF00884	Sulfatase
SH08_RS01290	PF08019	SH08_RS01290
SH08_RS01295	PF00311	Phosphoenolpyruvate carboxylase
SH08_RS01305	PF01546	Peptidase family M20/M25/M40
SH08_RS01305	PF07687	Peptidase dimerisation domain
SH08_RS01310	PF01118	Semialdehyde dehydrogenase, NAD binding domain
SH08_RS01310	PF02774	Semialdehyde dehydrogenase, dimerisation domain
SH08_RS01315	PF00696	Amino acid kinase family
SH08_RS01320	PF00206	Lyase
SH08_RS01320	PF14698	Argininosuccinate lyase C-terminal
SH08_RS01325	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS01325	PF03466	LysR substrate binding domain
SH08_RS01330	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
SH08_RS01330	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SH08_RS01335	PF00440	Bacterial regulatory proteins, tetR family
SH08_RS01340	PF07226	SH08_RS01340
SH08_RS01345	PF05958	tRNA (Uracil-5-)-methyltransferase
SH08_RS01350	PF00593	TonB dependent receptor
SH08_RS01350	PF07715	TonB-dependent Receptor Plug Domain
SH08_RS01355	PF01177	Asp/Glu/Hydantoin racemase
SH08_RS01380	PF01565	FAD binding domain
SH08_RS01380	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
SH08_RS01385	PF02237	Biotin protein ligase C terminal domain
SH08_RS01385	PF03099	Biotin/lipoate A/B protein ligase family
SH08_RS01385	PF08279	HTH domain
SH08_RS01390	PF00485	Phosphoribulokinase / Uridine kinase family
SH08_RS01420	PF00009	Elongation factor Tu GTP binding domain
SH08_RS01420	PF03143	Elongation factor Tu C-terminal domain
SH08_RS01420	PF03144	Elongation factor Tu domain 2
SH08_RS01425	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
SH08_RS01430	PF00467	KOW motif
SH08_RS01430	PF02357	Transcription termination factor nusG
SH08_RS01435	PF00298	Ribosomal protein L11, RNA binding domain
SH08_RS01435	PF03946	Ribosomal protein L11, N-terminal domain
SH08_RS01440	PF00687	Ribosomal protein L1p/L10e family
SH08_RS01445	PF00466	Ribosomal protein L10
SH08_RS01450	PF00542	Ribosomal protein L7/L12 C-terminal domain
SH08_RS01450	PF16320	SH08_RS01450
SH08_RS01455	PF00562	RNA polymerase Rpb2, domain 6
SH08_RS01455	PF04560	RNA polymerase Rpb2, domain 7
SH08_RS01455	PF04561	RNA polymerase Rpb2, domain 2
SH08_RS01455	PF04563	RNA polymerase beta subunit
SH08_RS01455	PF04565	RNA polymerase Rpb2, domain 3
SH08_RS01455	PF10385	RNA polymerase beta subunit external 1 domain
SH08_RS01460	PF00623	RNA polymerase Rpb1, domain 2
SH08_RS01460	PF04983	RNA polymerase Rpb1, domain 3
SH08_RS01460	PF04997	RNA polymerase Rpb1, domain 1
SH08_RS01460	PF04998	RNA polymerase Rpb1, domain 5
SH08_RS01460	PF05000	RNA polymerase Rpb1, domain 4
SH08_RS01470	PF04055	Radical SAM superfamily
SH08_RS01470	PF06968	Biotin and Thiamin Synthesis associated domain
SH08_RS01475	PF05690	Thiazole biosynthesis protein ThiG
SH08_RS01480	PF02597	ThiS family
SH08_RS01485	PF00899	ThiF family
SH08_RS01490	PF02581	Thiamine monophosphate synthase/TENI
SH08_RS01495	PF01964	ThiC family
SH08_RS01495	PF13667	ThiC-associated domain
SH08_RS01500	PF04353	Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ
SH08_RS01505	PF00293	NUDIX domain
SH08_RS01505	PF09297	NADH pyrophosphatase zinc ribbon domain
SH08_RS01510	PF01208	Uroporphyrinogen decarboxylase (URO-D)
SH08_RS01515	PF04493	Endonuclease V
SH08_RS01520	PF04222	Protein of unknown function (DUF416)
SH08_RS01525	PF00216	Bacterial DNA-binding protein
SH08_RS01530	PF07356	SH08_RS01530
SH08_RS01530	PF08139	SH08_RS01530
SH08_RS01535	PF13801	Heavy-metal resistance
SH08_RS01540	PF00512	His Kinase A (phospho-acceptor) domain
SH08_RS01540	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH08_RS01545	PF00072	Response regulator receiver domain
SH08_RS01545	PF00158	Sigma-54 interaction domain
SH08_RS01545	PF02954	Bacterial regulatory protein, Fis family
SH08_RS01550	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
SH08_RS01550	PF02843	Phosphoribosylglycinamide synthetase, C domain
SH08_RS01550	PF02844	Phosphoribosylglycinamide synthetase, N domain
SH08_RS01555	PF01808	AICARFT/IMPCHase bienzyme
SH08_RS01555	PF02142	MGS-like domain
SH08_RS01595	PF13673	Acetyltransferase (GNAT) domain
SH08_RS01600	PF04204	Homoserine O-succinyltransferase
SH08_RS01605	PF01274	Malate synthase
SH08_RS01610	PF00463	Isocitrate lyase family
SH08_RS01615	PF06315	Isocitrate dehydrogenase kinase/phosphatase (AceK)
SH08_RS01620	PF07906	SH08_RS01620
SH08_RS01625	PF01614	Bacterial transcriptional regulator
SH08_RS01625	PF09339	IclR helix-turn-helix domain
SH08_RS01630	PF00809	Pterin binding enzyme
SH08_RS01630	PF02310	B12 binding domain
SH08_RS01630	PF02574	Homocysteine S-methyltransferase
SH08_RS01630	PF02607	B12 binding domain
SH08_RS01630	PF02965	Vitamin B12 dependent methionine synthase, activation domain
SH08_RS01635	PF02690	SH08_RS01635
SH08_RS01640	PF03575	Peptidase family S51
SH08_RS01645	PF00849	RNA pseudouridylate synthase
SH08_RS01645	PF01479	S4 domain
SH08_RS01650	PF11656	SH08_RS01650
SH08_RS01655	PF00696	Amino acid kinase family
SH08_RS01655	PF01842	ACT domain
SH08_RS01660	PF00342	Phosphoglucose isomerase
SH08_RS01665	PF03400	SH08_RS01665
SH08_RS01670	PF03811	SH08_RS01670
SH08_RS01670	PF12759	SH08_RS01670
SH08_RS01675	PF11106	SH08_RS01675
SH08_RS01680	PF11102	Group 4 capsule polysaccharide formation lipoprotein gfcB
SH08_RS01685	PF06251	Capsule biosynthesis GfcC
SH08_RS01690	PF06082	SH08_RS01690
SH08_RS01695	PF17089	SH08_RS01695
SH08_RS01705	PF06146	SH08_RS01705
SH08_RS01710	PF00083	Sugar (and other) transporter
SH08_RS01715	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS01720	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS01720	PF14785	Maltose transport system permease protein MalF P2 domain
SH08_RS01725	PF13416	Bacterial extracellular solute-binding protein
SH08_RS01735	PF00005	ABC transporter
SH08_RS01735	PF08402	TOBE domain
SH08_RS01740	PF02264	LamB porin
SH08_RS01745	PF07148	SH08_RS01745
SH08_RS01755	PF13599	Pentapeptide repeats (9 copies)
SH08_RS01755	PF13981	SopA-like central domain
SH08_RS01760	PF04345	Chorismate lyase
SH08_RS01765	PF01040	UbiA prenyltransferase family
SH08_RS01770	PF01553	Acyltransferase
SH08_RS01775	PF01219	Prokaryotic diacylglycerol kinase
SH08_RS01780	PF00717	Peptidase S24-like
SH08_RS01780	PF01726	LexA DNA binding domain
SH08_RS01785	PF01554	MatE
SH08_RS01790	PF05532	CsbD-like
SH08_RS01795	PF01475	Ferric uptake regulator family
SH08_RS01805	PF10897	SH08_RS01805
SH08_RS01810	PF01207	Dihydrouridine synthase (Dus)
SH08_RS01815	PF09583	SH08_RS01815
SH08_RS01820	PF00107	Zinc-binding dehydrogenase
SH08_RS01820	PF08240	Alcohol dehydrogenase GroES-like domain
SH08_RS01825	PF00772	DnaB-like helicase N terminal domain
SH08_RS01825	PF03796	DnaB-like helicase C terminal domain
SH08_RS01830	PF00842	Alanine racemase, C-terminal domain
SH08_RS01830	PF01168	Alanine racemase, N-terminal domain
SH08_RS01835	PF00155	Aminotransferase class I and II
SH08_RS01845	PF03767	HAD superfamily, subfamily IIIB (Acid phosphatase)
SH08_RS01850	PF01894	Uncharacterised protein family UPF0047
SH08_RS01855	PF04237	YjbR
SH08_RS01860	PF00005	ABC transporter
SH08_RS01865	PF00436	Single-strand binding protein family
SH08_RS01870	PF15940	SH08_RS01870
SH08_RS01875	PF00563	EAL domain
SH08_RS01875	PF12792	SH08_RS01875
SH08_RS01880	PF12833	Helix-turn-helix domain
SH08_RS01885	PF00376	MerR family regulatory protein
SH08_RS01885	PF09278	MerR, DNA binding
SH08_RS01890	PF00860	Permease family
SH08_RS01895	PF00999	Sodium/hydrogen exchanger family
SH08_RS01900	PF00805	Pentapeptide repeats (8 copies)
SH08_RS01900	PF13599	Pentapeptide repeats (9 copies)
SH08_RS01905	PF00474	Sodium:solute symporter family
SH08_RS01910	PF04341	SH08_RS01910
SH08_RS01915	PF00501	AMP-binding enzyme
SH08_RS01915	PF13193	AMP-binding enzyme C-terminal domain
SH08_RS01915	PF16177	SH08_RS01915
SH08_RS01920	PF02335	Cytochrome c552
SH08_RS01925	PF09699	Doubled CXXCH motif (Paired_CXXCH_1)
SH08_RS01925	PF13435	Cytochrome c554 and c-prime
SH08_RS01930	PF00037	4Fe-4S binding domain
SH08_RS01930	PF13247	4Fe-4S dicluster domain
SH08_RS01935	PF03916	SH08_RS01935
SH08_RS01940	PF01578	SH08_RS01940
SH08_RS01940	PF16327	SH08_RS01940
SH08_RS01945	PF03918	Cytochrome C biogenesis protein
SH08_RS01955	PF00375	Sodium:dicarboxylate symporter family
SH08_RS01960	PF08238	Sel1 repeat
SH08_RS01965	PF00384	Molybdopterin oxidoreductase
SH08_RS01965	PF01568	Molydopterin dinucleotide binding domain
SH08_RS01970	PF00384	Molybdopterin oxidoreductase
SH08_RS01970	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
SH08_RS01975	PF02321	Outer membrane efflux protein
SH08_RS01980	PF04632	SH08_RS01980
SH08_RS01985	PF13437	HlyD family secretion protein
SH08_RS01985	PF13533	Biotin-lipoyl like
SH08_RS01990	PF17090	SH08_RS01990
SH08_RS01995	PF00753	Metallo-beta-lactamase superfamily
SH08_RS01995	PF14863	Alkyl sulfatase dimerisation
SH08_RS01995	PF14864	Alkyl sulfatase C-terminal
SH08_RS02000	PF00480	ROK family
SH08_RS02005	PF00834	Ribulose-phosphate 3 epimerase family
SH08_RS02010	PF02653	SH08_RS02010
SH08_RS02015	PF00005	ABC transporter
SH08_RS02020	PF13407	Periplasmic binding protein domain
SH08_RS02025	PF01380	SIS domain
SH08_RS02025	PF01418	Helix-turn-helix domain, rpiR family
SH08_RS02030	PF02502	Ribose/Galactose Isomerase
SH08_RS02040	PF12706	Beta-lactamase superfamily domain
SH08_RS02045	PF00583	Acetyltransferase (GNAT) family
SH08_RS02050	PF13238	AAA domain
SH08_RS02055	PF07969	Amidohydrolase family
SH08_RS02060	PF00005	ABC transporter
SH08_RS02065	PF00005	ABC transporter
SH08_RS02070	PF06007	SH08_RS02070
SH08_RS02075	PF05861	SH08_RS02075
SH08_RS02080	PF05845	Bacterial phosphonate metabolism protein (PhnH)
SH08_RS02085	PF06754	SH08_RS02085
SH08_RS02090	PF00392	Bacterial regulatory proteins, gntR family
SH08_RS02090	PF07702	UTRA domain
SH08_RS02100	PF12974	ABC transporter, phosphonate, periplasmic substrate-binding protein
SH08_RS02105	PF00005	ABC transporter
SH08_RS02110	PF06983	3-demethylubiquinone-9 3-methyltransferase
SH08_RS02115	PF03831	PhnA protein
SH08_RS02115	PF08274	PhnA Zinc-Ribbon
SH08_RS02120	PF00350	Dynamin family
SH08_RS02125	PF13990	SH08_RS02125
SH08_RS02130	PF00083	Sugar (and other) transporter
SH08_RS02130	PF08946	Osmosensory transporter coiled coil
SH08_RS02140	PF00512	His Kinase A (phospho-acceptor) domain
SH08_RS02140	PF00672	HAMP domain
SH08_RS02140	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH08_RS02145	PF00072	Response regulator receiver domain
SH08_RS02145	PF00486	Transcriptional regulatory protein, C terminal
SH08_RS02150	PF00884	Sulfatase
SH08_RS02150	PF08019	SH08_RS02150
SH08_RS02155	PF13520	Amino acid permease
SH08_RS02160	PF12833	Helix-turn-helix domain
SH08_RS02165	PF01276	Orn/Lys/Arg decarboxylase, major domain
SH08_RS02165	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
SH08_RS02165	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
SH08_RS02170	PF12833	Helix-turn-helix domain
SH08_RS02180	PF02056	Family 4 glycosyl hydrolase
SH08_RS02180	PF11975	Family 4 glycosyl hydrolase C-terminal domain
SH08_RS02185	PF13347	MFS/sugar transport protein
SH08_RS02190	PF09997	SH08_RS02190
SH08_RS02195	PF05681	SH08_RS02195
SH08_RS02195	PF05683	Fumarase C-terminus
SH08_RS02200	PF03605	SH08_RS02200
SH08_RS02210	PF00072	Response regulator receiver domain
SH08_RS02215	PF00989	PAS fold
SH08_RS02215	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH08_RS02215	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
SH08_RS02215	PF17203	SH08_RS02215
SH08_RS02220	PF06902	Divergent 4Fe-4S mono-cluster
SH08_RS02225	PF14542	GCN5-related N-acetyl-transferase
SH08_RS02230	PF11080	Protein of unknown function (DUF2622)
SH08_RS02235	PF10753	SH08_RS02235
SH08_RS02240	PF00152	tRNA synthetases class II (D, K and N)
SH08_RS02240	PF01336	OB-fold nucleic acid binding domain
SH08_RS02245	PF00854	POT family
SH08_RS02250	PF01276	Orn/Lys/Arg decarboxylase, major domain
SH08_RS02250	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
SH08_RS02250	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
SH08_RS02255	PF13520	Amino acid permease
SH08_RS02260	PF00486	Transcriptional regulatory protein, C terminal
SH08_RS02275	PF02683	SH08_RS02275
SH08_RS02275	PF11412	Disulphide bond corrector protein DsbC
SH08_RS02275	PF13899	Thioredoxin-like
SH08_RS02280	PF03091	CutA1 divalent ion tolerance protein
SH08_RS02285	PF03605	SH08_RS02285
SH08_RS02290	PF00206	Lyase
SH08_RS02290	PF10415	Fumarase C C-terminus
SH08_RS02295	PF04186	SH08_RS02295
SH08_RS02300	PF13520	Amino acid permease
SH08_RS02305	PF00166	Chaperonin 10 Kd subunit
SH08_RS02310	PF00118	TCP-1/cpn60 chaperonin family
SH08_RS02315	PF13698	SH08_RS02315
SH08_RS02320	PF15922	SH08_RS02320
SH08_RS02325	PF04055	Radical SAM superfamily
SH08_RS02325	PF13353	4Fe-4S single cluster domain
SH08_RS02330	PF01132	Elongation factor P (EF-P) OB domain
SH08_RS02330	PF08207	Elongation factor P (EF-P) KOW-like domain
SH08_RS02330	PF09285	Elongation factor P, C-terminal
SH08_RS02335	PF08085	SH08_RS02335
SH08_RS02340	PF08085	SH08_RS02340
SH08_RS02345	PF00893	Small Multidrug Resistance protein
SH08_RS02350	PF08212	Lipocalin-like domain
SH08_RS02355	PF00144	Beta-lactamase
SH08_RS02360	PF02313	Fumarate reductase subunit D
SH08_RS02365	PF02300	Fumarate reductase subunit C
SH08_RS02370	PF13085	2Fe-2S iron-sulfur cluster binding domain
SH08_RS02370	PF13183	4Fe-4S dicluster domain
SH08_RS02375	PF00890	FAD binding domain
SH08_RS02375	PF02910	Fumarate reductase flavoprotein C-term
SH08_RS02380	PF00152	tRNA synthetases class II (D, K and N)
SH08_RS02385	PF13520	Amino acid permease
SH08_RS02395	PF10840	SH08_RS02395
SH08_RS02400	PF00924	Mechanosensitive ion channel
SH08_RS02400	PF12794	SH08_RS02400
SH08_RS02400	PF12795	SH08_RS02400
SH08_RS02405	PF02666	SH08_RS02405
SH08_RS02410	PF03193	Protein of unknown function, DUF258
SH08_RS02415	PF00929	Exonuclease
SH08_RS02435	PF08331	SH08_RS02435
SH08_RS02435	PF13484	SH08_RS02435
SH08_RS02440	PF01256	Carbohydrate kinase
SH08_RS02440	PF03853	YjeF-related protein N-terminus
SH08_RS02445	PF02367	Uncharacterised P-loop hydrolase UPF0079
SH08_RS02450	PF01520	N-acetylmuramoyl-L-alanine amidase
SH08_RS02455	PF01119	DNA mismatch repair protein, C-terminal domain
SH08_RS02455	PF08676	MutL C terminal dimerisation domain
SH08_RS02455	PF13589	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH08_RS02460	PF01715	IPP transferase
SH08_RS02470	PF01926	50S ribosome-binding GTPase
SH08_RS02470	PF13167	SH08_RS02470
SH08_RS02470	PF16360	SH08_RS02470
SH08_RS02475	PF01145	SPFH domain / Band 7 family
SH08_RS02475	PF12221	SH08_RS02475
SH08_RS02480	PF01145	SPFH domain / Band 7 family
SH08_RS02485	PF09838	SH08_RS02485
SH08_RS02490	PF00709	Adenylosuccinate synthetase
SH08_RS02495	PF02082	Transcriptional regulator
SH08_RS02500	PF00575	S1 RNA binding domain
SH08_RS02500	PF00773	RNB domain
SH08_RS02500	PF08206	Ribonuclease B OB domain
SH08_RS02500	PF08461	Ribonuclease R winged-helix domain
SH08_RS02505	PF00588	SpoU rRNA Methylase family
SH08_RS02505	PF08032	RNA 2'-O ribose methyltransferase substrate binding
SH08_RS02510	PF09938	SH08_RS02510
SH08_RS02515	PF04012	SH08_RS02515
SH08_RS02520	PF10679	SH08_RS02520
SH08_RS02525	PF03994	SH08_RS02525
SH08_RS02530	PF06693	SH08_RS02530
SH08_RS02535	PF03738	Glutathionylspermidine synthase preATP-grasp
SH08_RS02540	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
SH08_RS02540	PF02770	Acyl-CoA dehydrogenase, middle domain
SH08_RS02545	PF07338	Protein of unknown function (DUF1471)
SH08_RS02550	PF07338	Protein of unknown function (DUF1471)
SH08_RS02555	PF00326	Prolyl oligopeptidase family
SH08_RS02560	PF00455	SH08_RS02560
SH08_RS02560	PF08220	DeoR-like helix-turn-helix domain
SH08_RS02565	PF13483	Beta-lactamase superfamily domain
SH08_RS02570	PF03611	SH08_RS02570
SH08_RS02575	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
SH08_RS02580	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
SH08_RS02585	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
SH08_RS02590	PF01261	Xylose isomerase-like TIM barrel
SH08_RS02595	PF00596	Class II Aldolase and Adducin N-terminal domain
SH08_RS02600	PF07338	Protein of unknown function (DUF1471)
SH08_RS02610	PF01250	Ribosomal protein S6
SH08_RS02615	PF00436	Single-strand binding protein family
SH08_RS02620	PF01084	Ribosomal protein S18
SH08_RS02625	PF01281	Ribosomal protein L9, N-terminal domain
SH08_RS02625	PF03948	Ribosomal protein L9, C-terminal domain
SH08_RS02630	PF10887	SH08_RS02630
SH08_RS02640	PF04225	Opacity-associated protein A LysM-like domain
SH08_RS02640	PF08525	SH08_RS02640
SH08_RS02645	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
SH08_RS02645	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
SH08_RS02650	PF00324	Amino acid permease
SH08_RS02655	PF01814	Hemerythrin HHE cation binding domain
SH08_RS02655	PF04405	SH08_RS02655
SH08_RS02660	PF00892	EamA-like transporter family
SH08_RS02665	PF05368	NmrA-like family
SH08_RS02670	PF01638	HxlR-like helix-turn-helix
SH08_RS02675	PF00149	Calcineurin-like phosphoesterase
SH08_RS02675	PF02872	5'-nucleotidase, C-terminal domain
SH08_RS02680	PF00459	Inositol monophosphatase family
SH08_RS02690	PF09695	SH08_RS02690
SH08_RS02695	PF06526	Protein of unknown function (DUF1107)
SH08_RS02700	PF00571	CBS domain
SH08_RS02700	PF01595	SH08_RS02700
SH08_RS02700	PF03471	Transporter associated domain
SH08_RS02705	PF01625	Peptide methionine sulfoxide reductase
SH08_RS02715	PF01103	Surface antigen
SH08_RS02715	PF07244	Surface antigen variable number repeat
SH08_RS02720	PF04357	SH08_RS02720
SH08_RS02725	PF06094	AIG2-like family
SH08_RS02730	PF04014	Antidote-toxin recognition MazE
SH08_RS02735	PF02452	PemK-like protein
SH08_RS02740	PF00719	Inorganic pyrophosphatase
SH08_RS02745	PF13407	Periplasmic binding protein domain
SH08_RS02750	PF00005	ABC transporter
SH08_RS02755	PF02653	SH08_RS02755
SH08_RS02760	PF02653	SH08_RS02760
SH08_RS02765	PF00316	Fructose-1-6-bisphosphatase
SH08_RS02770	PF01225	Mur ligase family, catalytic domain
SH08_RS02770	PF02875	Mur ligase family, glutamate ligase domain
SH08_RS02770	PF08245	Mur ligase middle domain
SH08_RS02775	PF04751	Protein of unknown function (DUF615)
SH08_RS02780	PF01523	Putative modulator of DNA gyrase
SH08_RS02785	PF07361	Cytochrome b562
SH08_RS02790	PF13353	4Fe-4S single cluster domain
SH08_RS02795	PF03477	ATP cone domain
SH08_RS02795	PF13597	Anaerobic ribonucleoside-triphosphate reductase
SH08_RS02800	PF00128	Alpha amylase, catalytic domain
SH08_RS02800	PF11941	Domain of unknown function (DUF3459)
SH08_RS02805	PF00367	phosphotransferase system, EIIB
SH08_RS02805	PF02378	Phosphotransferase system, EIIC
SH08_RS02810	PF00356	Bacterial regulatory proteins, lacI family
SH08_RS02810	PF13377	Periplasmic binding protein-like domain
SH08_RS02815	PF00122	E1-E2 ATPase
SH08_RS02815	PF00689	Cation transporting ATPase, C-terminus
SH08_RS02815	PF00690	Cation transporter/ATPase, N-terminus
SH08_RS02815	PF00702	haloacid dehalogenase-like hydrolase
SH08_RS02820	PF01042	Endoribonuclease L-PSP
SH08_RS02825	PF01948	Aspartate carbamoyltransferase regulatory chain, allosteric domain
SH08_RS02825	PF02748	Aspartate carbamoyltransferase regulatory chain, metal binding domain
SH08_RS02830	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
SH08_RS02830	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
SH08_RS02835	PF08052	SH08_RS02835
SH08_RS02845	PF01042	Endoribonuclease L-PSP
SH08_RS02850	PF13561	Enoyl-(Acyl carrier protein) reductase
SH08_RS02855	PF00440	Bacterial regulatory proteins, tetR family
SH08_RS02860	PF04074	Domain of unknown function (DUF386)
SH08_RS02870	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
SH08_RS02870	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
SH08_RS02875	PF06877	Regulator of ribonuclease activity B
SH08_RS02880	PF00583	Acetyltransferase (GNAT) family
SH08_RS02885	PF05987	SH08_RS02885
SH08_RS02890	PF00133	tRNA synthetases class I (I, L, M and V)
SH08_RS02890	PF08264	Anticodon-binding domain of tRNA
SH08_RS02890	PF10458	Valyl tRNA synthetase tRNA binding arm
SH08_RS02895	PF04364	DNA polymerase III chi subunit, HolC
SH08_RS02900	PF00883	Cytosol aminopeptidase family, catalytic domain
SH08_RS02900	PF02789	Cytosol aminopeptidase family, N-terminal domain
SH08_RS02905	PF03739	SH08_RS02905
SH08_RS02910	PF03739	SH08_RS02910
SH08_RS02915	PF05872	SH08_RS02915
SH08_RS02920	PF00356	Bacterial regulatory proteins, lacI family
SH08_RS02920	PF13377	Periplasmic binding protein-like domain
SH08_RS02925	PF02447	SH08_RS02925
SH08_RS02930	PF00106	short chain dehydrogenase
SH08_RS02935	PF00107	Zinc-binding dehydrogenase
SH08_RS02935	PF08240	Alcohol dehydrogenase GroES-like domain
SH08_RS02940	PF01202	Shikimate kinase
SH08_RS02945	PF00107	Zinc-binding dehydrogenase
SH08_RS02945	PF08240	Alcohol dehydrogenase GroES-like domain
SH08_RS02955	PF00589	Phage integrase family
SH08_RS02955	PF13356	Domain of unknown function (DUF4102)
SH08_RS02965	PF01527	Transposase
SH08_RS02970	PF00665	Integrase core domain
SH08_RS02970	PF13276	SH08_RS02970
SH08_RS02990	PF03050	SH08_RS02990
SH08_RS03000	PF01609	Transposase DDE domain
SH08_RS03000	PF13006	SH08_RS03000
SH08_RS03005	PF07690	Major Facilitator Superfamily
SH08_RS03010	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
SH08_RS03010	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
SH08_RS03015	PF16747	SH08_RS03015
SH08_RS03020	PF11700	SH08_RS03020
SH08_RS03025	PF01527	Transposase
SH08_RS03030	PF00665	Integrase core domain
SH08_RS03030	PF13936	Helix-turn-helix domain
SH08_RS03035	PF01527	Transposase
SH08_RS03050	PF00005	ABC transporter
SH08_RS03055	PF01032	FecCD transport family
SH08_RS03060	PF01032	FecCD transport family
SH08_RS03065	PF01497	Periplasmic binding protein
SH08_RS03070	PF00593	TonB dependent receptor
SH08_RS03070	PF07660	Secretin and TonB N terminus short domain
SH08_RS03070	PF07715	TonB-dependent Receptor Plug Domain
SH08_RS03075	PF04773	FecR protein
SH08_RS03075	PF16220	SH08_RS03075
SH08_RS03075	PF16344	SH08_RS03075
SH08_RS03080	PF04542	Sigma-70 region 2
SH08_RS03080	PF08281	Sigma-70, region 4
SH08_RS03095	PF03400	SH08_RS03095
SH08_RS03100	PF04198	Putative sugar-binding domain
SH08_RS03110	PF02447	SH08_RS03110
SH08_RS03115	PF00920	Dehydratase family
SH08_RS03120	PF00701	Dihydrodipicolinate synthetase family
SH08_RS03125	PF01614	Bacterial transcriptional regulator
SH08_RS03130	PF00455	SH08_RS03130
SH08_RS03130	PF08220	DeoR-like helix-turn-helix domain
SH08_RS03135	PF00834	Ribulose-phosphate 3 epimerase family
SH08_RS03140	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
SH08_RS03145	PF03437	BtpA family
SH08_RS03150	PF03611	SH08_RS03150
SH08_RS03155	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
SH08_RS03160	PF05343	M42 glutamyl aminopeptidase
SH08_RS03165	PF13847	Methyltransferase domain
SH08_RS03170	PF00583	Acetyltransferase (GNAT) family
SH08_RS03175	PF09857	SH08_RS03175
SH08_RS03190	PF13087	AAA domain
SH08_RS03190	PF13091	PLD-like domain
SH08_RS03200	PF01344	Kelch motif
SH08_RS03205	PF06178	Oligogalacturonate-specific porin protein (KdgM)
SH08_RS03220	PF00589	Phage integrase family
SH08_RS03225	PF00589	Phage integrase family
SH08_RS03235	PF00419	Fimbrial protein
SH08_RS03240	PF00419	Fimbrial protein
SH08_RS03245	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
SH08_RS03245	PF02753	Pili assembly chaperone PapD, C-terminal domain
SH08_RS03250	PF00577	Outer membrane usher protein
SH08_RS03250	PF13953	PapC C-terminal domain
SH08_RS03250	PF13954	PapC N-terminal domain
SH08_RS03255	PF00419	Fimbrial protein
SH08_RS03265	PF00419	Fimbrial protein
SH08_RS03265	PF09160	FimH, mannose binding
SH08_RS03270	PF02447	SH08_RS03270
SH08_RS03280	PF03786	D-mannonate dehydratase (UxuA)
SH08_RS03285	PF01232	Mannitol dehydrogenase Rossmann domain
SH08_RS03285	PF08125	Mannitol dehydrogenase C-terminal domain
SH08_RS03290	PF15954	SH08_RS03290
SH08_RS03295	PF00392	Bacterial regulatory proteins, gntR family
SH08_RS03295	PF07729	FCD domain
SH08_RS03300	PF10887	SH08_RS03300
SH08_RS03320	PF04965	Gene 25-like lysozyme
SH08_RS03325	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS03325	PF03466	LysR substrate binding domain
SH08_RS03330	PF01979	Amidohydrolase family
SH08_RS03335	PF07670	Nucleoside recognition
SH08_RS03340	PF07670	Nucleoside recognition
SH08_RS03345	PF01885	RNA 2'-phosphotransferase, Tpt1 / KptA family
SH08_RS03350	PF06779	SH08_RS03350
SH08_RS03355	PF06977	SdiA-regulated
SH08_RS03360	PF11823	SH08_RS03360
SH08_RS03365	PF01869	BadF/BadG/BcrA/BcrD ATPase family
SH08_RS03370	PF06050	2-hydroxyglutaryl-CoA dehydratase, D-component
SH08_RS03375	PF04286	SH08_RS03375
SH08_RS03380	PF07690	Major Facilitator Superfamily
SH08_RS03390	PF00155	Aminotransferase class I and II
SH08_RS03390	PF00392	Bacterial regulatory proteins, gntR family
SH08_RS03395	PF06568	SH08_RS03395
SH08_RS03410	PF10117	SH08_RS03410
SH08_RS03415	PF07728	AAA domain (dynein-related subfamily)
SH08_RS03415	PF12102	Domain of unknown function (DUF3578)
SH08_RS03420	PF08845	SH08_RS03420
SH08_RS03425	PF01420	Type I restriction modification DNA specificity domain
SH08_RS03430	PF02384	N-6 DNA Methylase
SH08_RS03430	PF12161	HsdM N-terminal domain
SH08_RS03435	PF00271	Helicase conserved C-terminal domain
SH08_RS03435	PF04313	Type I restriction enzyme R protein N terminus (HSDR_N)
SH08_RS03435	PF04851	Type III restriction enzyme, res subunit
SH08_RS03435	PF08463	SH08_RS03435
SH08_RS03440	PF07690	Major Facilitator Superfamily
SH08_RS03445	PF00440	Bacterial regulatory proteins, tetR family
SH08_RS03445	PF02909	Tetracyclin repressor, C-terminal all-alpha domain
SH08_RS03450	PF04471	Restriction endonuclease
SH08_RS03455	PF02492	CobW/HypB/UreG, nucleotide-binding domain
SH08_RS03455	PF07683	Cobalamin synthesis protein cobW C-terminal domain
SH08_RS03460	PF04328	SH08_RS03460
SH08_RS03465	PF02554	SH08_RS03465
SH08_RS03465	PF13722	SH08_RS03465
SH08_RS03475	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SH08_RS03475	PF00672	HAMP domain
SH08_RS03475	PF02203	Tar ligand binding domain homologue
SH08_RS03480	PF07690	Major Facilitator Superfamily
SH08_RS03485	PF00392	Bacterial regulatory proteins, gntR family
SH08_RS03485	PF07729	FCD domain
SH08_RS03490	PF00107	Zinc-binding dehydrogenase
SH08_RS03490	PF08240	Alcohol dehydrogenase GroES-like domain
SH08_RS03495	PF00884	Sulfatase
SH08_RS03500	PF10696	SH08_RS03500
SH08_RS03505	PF01695	IstB-like ATP binding protein
SH08_RS03515	PF12821	SH08_RS03515
SH08_RS03520	PF06738	SH08_RS03520
SH08_RS03525	PF00196	Bacterial regulatory proteins, luxR family
SH08_RS03530	PF00196	Bacterial regulatory proteins, luxR family
SH08_RS03535	PF06276	Ferric iron reductase FhuF-like transporter
SH08_RS03535	PF11575	SH08_RS03535
SH08_RS03540	PF07256	SH08_RS03540
SH08_RS03560	PF05175	Methyltransferase small domain
SH08_RS03560	PF08468	Methyltransferase small domain N-terminal
SH08_RS03565	PF03603	DNA polymerase III psi subunit
SH08_RS03570	PF00583	Acetyltransferase (GNAT) family
SH08_RS03575	PF13419	Haloacid dehalogenase-like hydrolase
SH08_RS03580	PF00009	Elongation factor Tu GTP binding domain
SH08_RS03580	PF03144	Elongation factor Tu domain 2
SH08_RS03580	PF16658	SH08_RS03580
SH08_RS03585	PF04972	BON domain
SH08_RS03590	PF07043	SH08_RS03590
SH08_RS03595	PF01734	Patatin-like phospholipase
SH08_RS03600	PF01026	TatD related DNase
SH08_RS03605	PF04055	Radical SAM superfamily
SH08_RS03605	PF13353	4Fe-4S single cluster domain
SH08_RS03610	PF11230	SH08_RS03610
SH08_RS03620	PF01791	DeoC/LacD family aldolase
SH08_RS03625	PF00591	Glycosyl transferase family, a/b domain
SH08_RS03625	PF02885	Glycosyl transferase family, helical bundle domain
SH08_RS03625	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
SH08_RS03630	PF01676	Metalloenzyme superfamily
SH08_RS03635	PF01048	Phosphorylase superfamily
SH08_RS03640	PF07804	HipA-like C-terminal domain
SH08_RS03640	PF07805	HipA-like N-terminal domain
SH08_RS03645	PF03099	Biotin/lipoate A/B protein ligase family
SH08_RS03645	PF10437	Bacterial lipoate protein ligase C-terminus
SH08_RS03650	PF10144	SH08_RS03650
SH08_RS03655	PF12710	haloacid dehalogenase-like hydrolase
SH08_RS03660	PF13481	AAA domain
SH08_RS03660	PF13541	Subunit ChlI of Mg-chelatase
SH08_RS03665	PF01381	Helix-turn-helix
SH08_RS03665	PF13521	AAA domain
SH08_RS03675	PF00005	ABC transporter
SH08_RS03675	PF12848	ABC transporter
SH08_RS03680	PF01464	Transglycosylase SLT domain
SH08_RS03680	PF14718	Soluble lytic murein transglycosylase L domain
SH08_RS03685	PF01371	Trp repressor protein
SH08_RS03690	PF01931	Protein of unknown function DUF84
SH08_RS03695	PF00300	Histidine phosphatase superfamily (branch 1)
SH08_RS03700	PF06445	GyrI-like small molecule binding domain
SH08_RS03700	PF12833	Helix-turn-helix domain
SH08_RS03705	PF05981	SH08_RS03705
SH08_RS03710	PF00072	Response regulator receiver domain
SH08_RS03710	PF00486	Transcriptional regulatory protein, C terminal
SH08_RS03715	PF00512	His Kinase A (phospho-acceptor) domain
SH08_RS03715	PF00672	HAMP domain
SH08_RS03715	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH08_RS03720	PF06123	SH08_RS03720
SH08_RS03725	PF00072	Response regulator receiver domain
SH08_RS03725	PF00486	Transcriptional regulatory protein, C terminal
SH08_RS03735	PF00588	SpoU rRNA Methylase family
SH08_RS03740	PF08254	SH08_RS03740
SH08_RS03745	PF00696	Amino acid kinase family
SH08_RS03745	PF00742	Homoserine dehydrogenase
SH08_RS03745	PF01842	ACT domain
SH08_RS03745	PF03447	Homoserine dehydrogenase, NAD binding domain
SH08_RS03745	PF13840	ACT domain
SH08_RS03750	PF00288	GHMP kinases N terminal domain
SH08_RS03750	PF08544	GHMP kinases C terminal
SH08_RS03755	PF00291	Pyridoxal-phosphate dependent enzyme
SH08_RS03755	PF14821	Threonine synthase N terminus
SH08_RS03765	PF10697	SH08_RS03765
SH08_RS03770	PF03883	SH08_RS03770
SH08_RS03775	PF01235	SH08_RS03775
SH08_RS03780	PF00923	Transaldolase
SH08_RS03785	PF00994	Probable molybdopterin binding domain
SH08_RS03790	PF01184	SH08_RS03790
SH08_RS03795	PF03981	SH08_RS03795
SH08_RS03795	PF13099	SH08_RS03795
SH08_RS03800	PF10807	SH08_RS03800
SH08_RS03805	PF00012	Hsp70 protein
SH08_RS03810	PF00226	DnaJ domain
SH08_RS03810	PF00684	DnaJ central domain
SH08_RS03810	PF01556	DnaJ C terminal domain
SH08_RS03815	PF01609	Transposase DDE domain
SH08_RS03820	PF01848	SH08_RS03820
SH08_RS03825	PF06965	Na+/H+ antiporter 1
SH08_RS03830	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS03830	PF03466	LysR substrate binding domain
SH08_RS03835	PF03400	SH08_RS03835
SH08_RS03840	PF01649	Ribosomal protein S20
SH08_RS03845	PF10837	SH08_RS03845
SH08_RS03850	PF01687	Riboflavin kinase
SH08_RS03850	PF06574	FAD synthetase
SH08_RS03855	PF00133	tRNA synthetases class I (I, L, M and V)
SH08_RS03855	PF06827	Zinc finger found in FPG and IleRS
SH08_RS03855	PF08264	Anticodon-binding domain of tRNA
SH08_RS03860	PF01252	SH08_RS03860
SH08_RS03865	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
SH08_RS03870	PF02401	LytB protein
SH08_RS03875	PF01156	Inosine-uridine preferring nucleoside hydrolase
SH08_RS03880	PF01113	Dihydrodipicolinate reductase, N-terminus
SH08_RS03880	PF05173	Dihydrodipicolinate reductase, C-terminus
SH08_RS03895	PF00117	Glutamine amidotransferase class-I
SH08_RS03895	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
SH08_RS03900	PF02142	MGS-like domain
SH08_RS03900	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
SH08_RS03900	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
SH08_RS03910	PF07180	Protein of unknown function (DUF1401)
SH08_RS03915	PF00132	Bacterial transferase hexapeptide (six repeats)
SH08_RS03920	PF00378	Enoyl-CoA hydratase/isomerase family
SH08_RS03925	PF00501	AMP-binding enzyme
SH08_RS03925	PF13193	AMP-binding enzyme C-terminal domain
SH08_RS03930	PF02515	CoA-transferase family III
SH08_RS03935	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
SH08_RS03935	PF02770	Acyl-CoA dehydrogenase, middle domain
SH08_RS03935	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
SH08_RS03940	PF02028	BCCT family transporter
SH08_RS03945	PF01012	Electron transfer flavoprotein domain
SH08_RS03950	PF00766	Electron transfer flavoprotein FAD-binding domain
SH08_RS03950	PF01012	Electron transfer flavoprotein domain
SH08_RS03955	PF01494	FAD binding domain
SH08_RS03965	PF00083	Sugar (and other) transporter
SH08_RS03970	PF02525	Flavodoxin-like fold
SH08_RS03975	PF00999	Sodium/hydrogen exchanger family
SH08_RS03975	PF02254	TrkA-N domain
SH08_RS03980	PF00186	Dihydrofolate reductase
SH08_RS03985	PF00149	Calcineurin-like phosphoesterase
SH08_RS03990	PF04379	Protein of unknown function (DUF525)
SH08_RS03995	PF00398	Ribosomal RNA adenine dimethylase
SH08_RS04000	PF04166	Pyridoxal phosphate biosynthetic protein PdxA
SH08_RS04005	PF00639	PPIC-type PPIASE domain
SH08_RS04005	PF09312	SurA N-terminal domain
SH08_RS04005	PF13616	PPIC-type PPIASE domain
SH08_RS04010	PF03968	OstA-like protein
SH08_RS04010	PF04453	Organic solvent tolerance protein
SH08_RS04015	PF00226	DnaJ domain
SH08_RS04015	PF05099	Tellurite resistance protein TerB
SH08_RS04025	PF00849	RNA pseudouridylate synthase
SH08_RS04030	PF00176	SNF2 family N-terminal domain
SH08_RS04030	PF00271	Helicase conserved C-terminal domain
SH08_RS04030	PF12137	RNA polymerase recycling family C-terminal
SH08_RS04035	PF00136	DNA polymerase family B
SH08_RS04035	PF03104	DNA polymerase family B, exonuclease domain
SH08_RS04040	PF00596	Class II Aldolase and Adducin N-terminal domain
SH08_RS04045	PF02610	L-arabinose isomerase
SH08_RS04045	PF11762	L-arabinose isomerase C-terminal domain
SH08_RS04050	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
SH08_RS04055	PF02311	AraC-like ligand binding domain
SH08_RS04055	PF12833	Helix-turn-helix domain
SH08_RS04060	PF09335	SH08_RS04060
SH08_RS04065	PF00005	ABC transporter
SH08_RS04070	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS04075	PF13343	Bacterial extracellular solute-binding protein
SH08_RS04080	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
SH08_RS04080	PF12793	SH08_RS04080
SH08_RS04085	PF15894	SH08_RS04085
SH08_RS04090	PF07690	Major Facilitator Superfamily
SH08_RS04095	PF00694	Aconitase C-terminal domain
SH08_RS04100	PF00330	Aconitase family (aconitate hydratase)
SH08_RS04105	PF00180	Isocitrate/isopropylmalate dehydrogenase
SH08_RS04110	PF00682	HMGL-like
SH08_RS04110	PF08502	LeuA allosteric (dimerisation) domain
SH08_RS04115	PF08054	SH08_RS04115
SH08_RS04120	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS04120	PF03466	LysR substrate binding domain
SH08_RS04125	PF00205	Thiamine pyrophosphate enzyme, central domain
SH08_RS04125	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
SH08_RS04125	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
SH08_RS04130	PF10369	Small subunit of acetolactate synthase
SH08_RS04130	PF13710	ACT domain
SH08_RS04140	PF00356	Bacterial regulatory proteins, lacI family
SH08_RS04140	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
SH08_RS04145	PF02381	MraZ protein
SH08_RS04150	PF01795	MraW methylase family
SH08_RS04155	PF04999	SH08_RS04155
SH08_RS04160	PF00905	Penicillin binding protein transpeptidase domain
SH08_RS04160	PF03717	Penicillin-binding Protein dimerisation domain
SH08_RS04165	PF01225	Mur ligase family, catalytic domain
SH08_RS04165	PF02875	Mur ligase family, glutamate ligase domain
SH08_RS04165	PF08245	Mur ligase middle domain
SH08_RS04170	PF01225	Mur ligase family, catalytic domain
SH08_RS04170	PF02875	Mur ligase family, glutamate ligase domain
SH08_RS04170	PF08245	Mur ligase middle domain
SH08_RS04175	PF00953	Glycosyl transferase family 4
SH08_RS04175	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1
SH08_RS04180	PF02875	Mur ligase family, glutamate ligase domain
SH08_RS04180	PF08245	Mur ligase middle domain
SH08_RS04185	PF01098	SH08_RS04185
SH08_RS04190	PF03033	Glycosyltransferase family 28 N-terminal domain
SH08_RS04190	PF04101	Glycosyltransferase family 28 C-terminal domain
SH08_RS04195	PF01225	Mur ligase family, catalytic domain
SH08_RS04195	PF02875	Mur ligase family, glutamate ligase domain
SH08_RS04195	PF08245	Mur ligase middle domain
SH08_RS04200	PF01820	D-ala D-ala ligase N-terminus
SH08_RS04200	PF07478	D-ala D-ala ligase C-terminus
SH08_RS04205	PF03799	Cell division protein FtsQ
SH08_RS04205	PF08478	POTRA domain, FtsQ-type
SH08_RS04210	PF02491	SHS2 domain inserted in FTSA
SH08_RS04210	PF14450	Cell division protein FtsA
SH08_RS04215	PF00091	Tubulin/FtsZ family, GTPase domain
SH08_RS04215	PF12327	FtsZ family, C-terminal domain
SH08_RS04220	PF03331	UDP-3-O-acyl N-acetylglycosamine deacetylase
SH08_RS04225	PF06558	SH08_RS04225
SH08_RS04230	PF01043	SecA preprotein cross-linking domain
SH08_RS04230	PF02810	SEC-C motif
SH08_RS04230	PF07516	SecA Wing and Scaffold domain
SH08_RS04230	PF07517	SecA DEAD-like domain
SH08_RS04235	PF00293	NUDIX domain
SH08_RS04245	PF03884	Domain of unknown function (DUF329)
SH08_RS04250	PF07072	Protein of unknown function (DUF1342)
SH08_RS04255	PF01121	Dephospho-CoA kinase
SH08_RS04260	PF00478	IMP dehydrogenase / GMP reductase domain
SH08_RS04265	PF00482	Type II secretion system (T2SS), protein F
SH08_RS04270	PF00437	Type II/IV secretion system protein
SH08_RS04270	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
SH08_RS04275	PF13633	Prokaryotic N-terminal methylation site
SH08_RS04285	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
SH08_RS04285	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
SH08_RS04290	PF01510	N-acetylmuramoyl-L-alanine amidase
SH08_RS04295	PF17113	SH08_RS04295
SH08_RS04300	PF00324	Amino acid permease
SH08_RS04305	PF00392	Bacterial regulatory proteins, gntR family
SH08_RS04305	PF07729	FCD domain
SH08_RS04310	PF00456	Transketolase, thiamine diphosphate binding domain
SH08_RS04315	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
SH08_RS04315	PF00364	Biotin-requiring enzyme
SH08_RS04315	PF02817	e3 binding domain
SH08_RS04320	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
SH08_RS04320	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SH08_RS04325	PF11737	SH08_RS04325
SH08_RS04330	PF00330	Aconitase family (aconitate hydratase)
SH08_RS04330	PF06434	Aconitate hydratase 2 N-terminus
SH08_RS04330	PF11791	Aconitate B N-terminal domain
SH08_RS04335	PF06062	SH08_RS04335
SH08_RS04340	PF02675	S-adenosylmethionine decarboxylase
SH08_RS04345	PF01564	Spermine/spermidine synthase
SH08_RS04350	PF09691	Bacterial chaperone lipoprotein (PulS_OutS)
SH08_RS04355	PF00394	Multicopper oxidase
SH08_RS04355	PF07731	Multicopper oxidase
SH08_RS04355	PF07732	Multicopper oxidase
SH08_RS04360	PF01011	PQQ enzyme repeat
SH08_RS04365	PF00156	Phosphoribosyl transferase domain
SH08_RS04370	PF00484	Carbonic anhydrase
SH08_RS04375	PF00005	ABC transporter
SH08_RS04380	PF01061	SH08_RS04380
SH08_RS04385	PF03610	PTS system fructose IIA component
SH08_RS04390	PF01522	Polysaccharide deacetylase
SH08_RS04395	PF02261	Aspartate decarboxylase
SH08_RS04400	PF04754	SH08_RS04400
SH08_RS04405	PF02569	Pantoate-beta-alanine ligase
SH08_RS04410	PF02548	Ketopantoate hydroxymethyltransferase
SH08_RS04415	PF00419	Fimbrial protein
SH08_RS04420	PF00419	Fimbrial protein
SH08_RS04425	PF00419	Fimbrial protein
SH08_RS04430	PF00419	Fimbrial protein
SH08_RS04435	PF00577	Outer membrane usher protein
SH08_RS04435	PF13953	PapC C-terminal domain
SH08_RS04435	PF13954	PapC N-terminal domain
SH08_RS04440	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
SH08_RS04440	PF02753	Pili assembly chaperone PapD, C-terminal domain
SH08_RS04445	PF00419	Fimbrial protein
SH08_RS04450	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
SH08_RS04455	PF01743	Poly A polymerase head domain
SH08_RS04455	PF12626	Polymerase A arginine-rich C-terminus
SH08_RS04455	PF12627	Probable RNA and SrmB- binding site of polymerase A
SH08_RS04460	PF00749	tRNA synthetases class I (E and Q), catalytic domain
SH08_RS04465	PF01258	Prokaryotic dksA/traR C4-type zinc finger
SH08_RS04470	PF03749	Sugar fermentation stimulation protein
SH08_RS04475	PF02834	LigT like Phosphoesterase
SH08_RS04480	PF00270	DEAD/DEAH box helicase
SH08_RS04480	PF00271	Helicase conserved C-terminal domain
SH08_RS04480	PF04408	Helicase associated domain (HA2)
SH08_RS04480	PF08482	SH08_RS04480
SH08_RS04490	PF00905	Penicillin binding protein transpeptidase domain
SH08_RS04490	PF00912	Transglycosylase
SH08_RS04490	PF14812	SH08_RS04490
SH08_RS04490	PF14814	Bifunctional transglycosylase second domain
SH08_RS04495	PF07715	TonB-dependent Receptor Plug Domain
SH08_RS04500	PF00665	Integrase core domain
SH08_RS04500	PF13276	SH08_RS04500
SH08_RS04505	PF01527	Transposase
SH08_RS04510	PF00593	TonB dependent receptor
SH08_RS04510	PF07715	TonB-dependent Receptor Plug Domain
SH08_RS04515	PF00005	ABC transporter
SH08_RS04520	PF01497	Periplasmic binding protein
SH08_RS04525	PF01032	FecCD transport family
SH08_RS04530	PF00202	Aminotransferase class-III
SH08_RS04535	PF00654	Voltage gated chloride channel
SH08_RS04540	PF01521	Iron-sulphur cluster biosynthesis
SH08_RS04545	PF03458	SH08_RS04545
SH08_RS04550	PF01497	Periplasmic binding protein
SH08_RS04555	PF01048	Phosphorylase superfamily
SH08_RS04560	PF01966	HD domain
SH08_RS04565	PF00595	PDZ domain (Also known as DHR or GLGF)
SH08_RS04565	PF13365	Trypsin-like peptidase domain
SH08_RS04570	PF05651	SH08_RS04570
SH08_RS04570	PF13556	PucR C-terminal helix-turn-helix domain
SH08_RS04575	PF11944	SH08_RS04575
SH08_RS04580	PF00149	Calcineurin-like phosphoesterase
SH08_RS04585	PF00132	Bacterial transferase hexapeptide (six repeats)
SH08_RS04585	PF14602	Hexapeptide repeat of succinyl-transferase
SH08_RS04585	PF14805	Tetrahydrodipicolinate N-succinyltransferase N-terminal
SH08_RS04590	PF01842	ACT domain
SH08_RS04590	PF01909	Nucleotidyltransferase domain
SH08_RS04590	PF01966	HD domain
SH08_RS04590	PF08335	GlnD PII-uridylyltransferase
SH08_RS04595	PF00557	Metallopeptidase family M24
SH08_RS04600	PF00318	Ribosomal protein S2
SH08_RS04605	PF00889	Elongation factor TS
SH08_RS04610	PF00696	Amino acid kinase family
SH08_RS04615	PF01765	Ribosome recycling factor
SH08_RS04620	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
SH08_RS04620	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal
SH08_RS04620	PF13288	DXP reductoisomerase C-terminal domain
SH08_RS04625	PF01255	Putative undecaprenyl diphosphate synthase
SH08_RS04630	PF01148	Cytidylyltransferase family
SH08_RS04635	PF00595	PDZ domain (Also known as DHR or GLGF)
SH08_RS04635	PF02163	Peptidase family M50
SH08_RS04640	PF01103	Surface antigen
SH08_RS04640	PF07244	Surface antigen variable number repeat
SH08_RS04645	PF03938	Outer membrane protein (OmpH-like)
SH08_RS04650	PF00132	Bacterial transferase hexapeptide (six repeats)
SH08_RS04650	PF04613	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD
SH08_RS04650	PF14602	Hexapeptide repeat of succinyl-transferase
SH08_RS04655	PF07977	FabA-like domain
SH08_RS04660	PF00132	Bacterial transferase hexapeptide (six repeats)
SH08_RS04660	PF13720	Udp N-acetylglucosamine O-acyltransferase; Domain 2
SH08_RS04665	PF02684	SH08_RS04665
SH08_RS04670	PF01351	Ribonuclease HII
SH08_RS04675	PF01336	OB-fold nucleic acid binding domain
SH08_RS04675	PF02811	PHP domain
SH08_RS04675	PF07733	Bacterial DNA polymerase III alpha subunit
SH08_RS04675	PF14579	Helix-hairpin-helix motif
SH08_RS04680	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
SH08_RS04685	PF01276	Orn/Lys/Arg decarboxylase, major domain
SH08_RS04685	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
SH08_RS04685	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
SH08_RS04690	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
SH08_RS04695	PF01171	PP-loop family
SH08_RS04695	PF09179	TilS substrate binding domain
SH08_RS04695	PF11734	TilS substrate C-terminal domain
SH08_RS04700	PF07073	Modulator of Rho-dependent transcription termination (ROF)
SH08_RS04705	PF06786	SH08_RS04705
SH08_RS04710	PF07152	YaeQ protein
SH08_RS04715	PF00472	RF-1 domain
SH08_RS04720	PF04170	NlpE N-terminal domain
SH08_RS04720	PF17185	SH08_RS04720
SH08_RS04725	PF05708	Orthopoxvirus protein of unknown function (DUF830)
SH08_RS04730	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
SH08_RS04730	PF03129	Anticodon binding domain
SH08_RS04730	PF04073	Aminoacyl-tRNA editing domain
SH08_RS04735	PF01980	Uncharacterised protein family UPF0066
SH08_RS04740	PF16358	SH08_RS04740
SH08_RS04745	PF03180	NLPA lipoprotein
SH08_RS04750	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS04755	PF00005	ABC transporter
SH08_RS04755	PF09383	NIL domain
SH08_RS04760	PF13242	HAD-hyrolase-like
SH08_RS04795	PF00248	Aldo/keto reductase family
SH08_RS04800	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS04800	PF03466	LysR substrate binding domain
SH08_RS04805	PF03372	Endonuclease/Exonuclease/phosphatase family
SH08_RS04810	PF08241	Methyltransferase domain
SH08_RS04815	PF01464	Transglycosylase SLT domain
SH08_RS04815	PF01476	LysM domain
SH08_RS04820	PF00753	Metallo-beta-lactamase superfamily
SH08_RS04820	PF16123	SH08_RS04820
SH08_RS04825	PF08241	Methyltransferase domain
SH08_RS04830	PF00075	RNase H
SH08_RS04835	PF00929	Exonuclease
SH08_RS04865	PF00795	Carbon-nitrogen hydrolase
SH08_RS04870	PF08816	Inhibitor of vertebrate lysozyme (Ivy)
SH08_RS04875	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
SH08_RS04875	PF02770	Acyl-CoA dehydrogenase, middle domain
SH08_RS04875	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
SH08_RS04875	PF09317	SH08_RS04875
SH08_RS04880	PF13580	SIS domain
SH08_RS04885	PF13230	Glutamine amidotransferases class-II
SH08_RS04890	PF03734	L,D-transpeptidase catalytic domain
SH08_RS04895	PF15738	SH08_RS04895
SH08_RS04900	PF04221	RelB antitoxin
SH08_RS04905	PF00877	NlpC/P60 family
SH08_RS04915	PF00771	FHIPEP family
SH08_RS04920	PF00691	OmpA family
SH08_RS04925	PF00817	impB/mucB/samB family
SH08_RS04925	PF11798	IMS family HHH motif
SH08_RS04925	PF11799	impB/mucB/samB family C-terminal domain
SH08_RS04930	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
SH08_RS04935	PF13957	SH08_RS04935
SH08_RS04940	PF13673	Acetyltransferase (GNAT) domain
SH08_RS04950	PF00472	RF-1 domain
SH08_RS04955	PF01546	Peptidase family M20/M25/M40
SH08_RS04955	PF07687	Peptidase dimerisation domain
SH08_RS04960	PF00156	Phosphoribosyl transferase domain
SH08_RS04965	PF06500	Alpha/beta hydrolase of unknown function (DUF1100)
SH08_RS04970	PF07417	Transcriptional regulator Crl
SH08_RS04975	PF00267	Gram-negative porin
SH08_RS04980	PF00696	Amino acid kinase family
SH08_RS04980	PF01472	PUA domain
SH08_RS04985	PF00171	Aldehyde dehydrogenase family
SH08_RS04995	PF06755	SH08_RS04995
SH08_RS05000	PF06154	YagB/YeeU/YfjZ family
SH08_RS05005	PF04002	RadC-like JAB domain
SH08_RS05010	PF03230	Antirestriction protein
SH08_RS05015	PF06006	Bacterial protein of unknown function (DUF905)
SH08_RS05035	PF06067	SH08_RS05035
SH08_RS05040	PF01926	50S ribosome-binding GTPase
SH08_RS05045	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS05045	PF03466	LysR substrate binding domain
SH08_RS05050	PF01527	Transposase
SH08_RS05055	PF00665	Integrase core domain
SH08_RS05055	PF13936	Helix-turn-helix domain
SH08_RS05075	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)
SH08_RS05080	PF01609	Transposase DDE domain
SH08_RS05080	PF05598	SH08_RS05080
SH08_RS05085	PF00324	Amino acid permease
SH08_RS05090	PF02574	Homocysteine S-methyltransferase
SH08_RS05095	PF00005	ABC transporter
SH08_RS05095	PF08402	TOBE domain
SH08_RS05100	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS05105	PF03400	SH08_RS05105
SH08_RS05110	PF03811	SH08_RS05110
SH08_RS05110	PF12759	SH08_RS05110
SH08_RS05115	PF01527	Transposase
SH08_RS05120	PF06154	YagB/YeeU/YfjZ family
SH08_RS05125	PF00665	Integrase core domain
SH08_RS05125	PF13565	SH08_RS05125
SH08_RS05130	PF00701	Dihydrodipicolinate synthetase family
SH08_RS05135	PF00920	Dehydratase family
SH08_RS05145	PF04616	Glycosyl hydrolases family 43
SH08_RS05145	PF07081	Protein of unknown function (DUF1349)
SH08_RS05150	PF01614	Bacterial transcriptional regulator
SH08_RS05150	PF09339	IclR helix-turn-helix domain
SH08_RS05155	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
SH08_RS05155	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
SH08_RS05160	PF03400	SH08_RS05160
SH08_RS05170	PF11726	SH08_RS05170
SH08_RS05175	PF07638	ECF sigma factor
SH08_RS05195	PF00589	Phage integrase family
SH08_RS05195	PF13356	Domain of unknown function (DUF4102)
SH08_RS05205	PF03466	LysR substrate binding domain
SH08_RS05210	PF02625	XdhC and CoxI family
SH08_RS05210	PF13478	XdhC Rossmann domain
SH08_RS05215	PF01315	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
SH08_RS05215	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
SH08_RS05220	PF00941	FAD binding domain in molybdopterin dehydrogenase
SH08_RS05220	PF03450	CO dehydrogenase flavoprotein C-terminal domain
SH08_RS05225	PF00111	2Fe-2S iron-sulfur cluster binding domain
SH08_RS05225	PF01799	[2Fe-2S] binding domain
SH08_RS05230	PF07274	SH08_RS05230
SH08_RS05235	PF03692	SH08_RS05235
SH08_RS05250	PF15976	SH08_RS05250
SH08_RS05250	PF16967	SH08_RS05250
SH08_RS05260	PF16449	SH08_RS05260
SH08_RS05265	PF00196	Bacterial regulatory proteins, luxR family
SH08_RS05275	PF00444	Ribosomal protein L36
SH08_RS05280	PF01197	Ribosomal protein L31
SH08_RS05290	PF11924	Protein of unknown function (DUF3442)
SH08_RS05295	PF01527	Transposase
SH08_RS05300	PF00665	Integrase core domain
SH08_RS05300	PF13276	SH08_RS05300
SH08_RS05305	PF12833	Helix-turn-helix domain
SH08_RS05310	PF04224	SH08_RS05310
SH08_RS05315	PF07338	Protein of unknown function (DUF1471)
SH08_RS05320	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
SH08_RS05320	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SH08_RS05325	PF12833	Helix-turn-helix domain
SH08_RS05325	PF12852	Cupin
SH08_RS05330	PF02754	SH08_RS05330
SH08_RS05335	PF02589	Uncharacterised ACR, YkgG family COG1556
SH08_RS05335	PF11870	SH08_RS05335
SH08_RS05335	PF13183	4Fe-4S dicluster domain
SH08_RS05340	PF02589	Uncharacterised ACR, YkgG family COG1556
SH08_RS05355	PF00732	GMC oxidoreductase
SH08_RS05355	PF05199	GMC oxidoreductase
SH08_RS05360	PF00171	Aldehyde dehydrogenase family
SH08_RS05365	PF00440	Bacterial regulatory proteins, tetR family
SH08_RS05365	PF13977	Bacterial transcriptional repressor
SH08_RS05370	PF02028	BCCT family transporter
SH08_RS05380	PF00196	Bacterial regulatory proteins, luxR family
SH08_RS05380	PF00563	EAL domain
SH08_RS05385	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS05385	PF03466	LysR substrate binding domain
SH08_RS05390	PF06496	SH08_RS05390
SH08_RS05395	PF12796	Ankyrin repeats (3 copies)
SH08_RS05395	PF13637	Ankyrin repeats (many copies)
SH08_RS05400	PF11392	SH08_RS05400
SH08_RS05405	PF00549	CoA-ligase
SH08_RS05405	PF02629	CoA binding domain
SH08_RS05410	PF06545	Protein of unknown function (DUF1116)
SH08_RS05415	PF15954	SH08_RS05415
SH08_RS05420	PF00696	Amino acid kinase family
SH08_RS05425	PF07969	Amidohydrolase family
SH08_RS05430	PF00107	Zinc-binding dehydrogenase
SH08_RS05430	PF08240	Alcohol dehydrogenase GroES-like domain
SH08_RS05445	PF01810	SH08_RS05445
SH08_RS05450	PF07338	Protein of unknown function (DUF1471)
SH08_RS05455	PF00158	Sigma-54 interaction domain
SH08_RS05455	PF02954	Bacterial regulatory protein, Fis family
SH08_RS05455	PF06506	Propionate catabolism activator
SH08_RS05460	PF13714	Phosphoenolpyruvate phosphomutase
SH08_RS05465	PF00285	Citrate synthase
SH08_RS05470	PF03972	MmgE/PrpD family
SH08_RS05475	PF00501	AMP-binding enzyme
SH08_RS05475	PF13193	AMP-binding enzyme C-terminal domain
SH08_RS05475	PF16177	SH08_RS05475
SH08_RS05480	PF02133	Permease for cytosine/purines, uracil, thiamine, allantoin
SH08_RS05485	PF07969	Amidohydrolase family
SH08_RS05490	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS05490	PF03466	LysR substrate binding domain
SH08_RS05495	PF00484	Carbonic anhydrase
SH08_RS05500	PF02560	Cyanate lyase C-terminal domain
SH08_RS05505	PF07690	Major Facilitator Superfamily
SH08_RS05510	PF00132	Bacterial transferase hexapeptide (six repeats)
SH08_RS05510	PF12464	Maltose acetyltransferase
SH08_RS05510	PF14602	Hexapeptide repeat of succinyl-transferase
SH08_RS05515	PF01306	LacY proton/sugar symporter
SH08_RS05520	PF02837	Glycosyl hydrolases family 2, sugar binding domain
SH08_RS05525	PF13377	Periplasmic binding protein-like domain
SH08_RS05530	PF01614	Bacterial transcriptional regulator
SH08_RS05530	PF09339	IclR helix-turn-helix domain
SH08_RS05535	PF01494	FAD binding domain
SH08_RS05540	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
SH08_RS05545	PF12697	Alpha/beta hydrolase family
SH08_RS05550	PF01557	Fumarylacetoacetate (FAA) hydrolase family
SH08_RS05555	PF01118	Semialdehyde dehydrogenase, NAD binding domain
SH08_RS05555	PF09290	Prokaryotic acetaldehyde dehydrogenase, dimerisation
SH08_RS05560	PF00682	HMGL-like
SH08_RS05560	PF07836	DmpG-like communication domain
SH08_RS05565	PF07690	Major Facilitator Superfamily
SH08_RS05570	PF09831	SH08_RS05570
SH08_RS05575	PF00756	Putative esterase
SH08_RS05580	PF00107	Zinc-binding dehydrogenase
SH08_RS05580	PF08240	Alcohol dehydrogenase GroES-like domain
SH08_RS05585	PF02583	Metal-sensitive transcriptional repressor
SH08_RS05595	PF00132	Bacterial transferase hexapeptide (six repeats)
SH08_RS05600	PF01527	Transposase
SH08_RS05605	PF00665	Integrase core domain
SH08_RS05605	PF13276	SH08_RS05605
SH08_RS05610	PF00535	Glycosyl transferase family 2
SH08_RS05615	PF02585	GlcNAc-PI de-N-acetylase
SH08_RS05620	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
SH08_RS05625	PF00005	ABC transporter
SH08_RS05630	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS05635	PF02668	Taurine catabolism dioxygenase TauD, TfdA family
SH08_RS05640	PF00490	Delta-aminolevulinic acid dehydratase
SH08_RS05655	PF00665	Integrase core domain
SH08_RS05655	PF13276	SH08_RS05655
SH08_RS05660	PF01527	Transposase
SH08_RS05665	PF03212	Pertactin
SH08_RS05665	PF03797	Autotransporter beta-domain
SH08_RS05670	PF15977	SH08_RS05670
SH08_RS05675	PF00144	Beta-lactamase
SH08_RS05685	PF05992	SH08_RS05685
SH08_RS05690	PF07759	SH08_RS05690
SH08_RS05695	PF10954	SH08_RS05695
SH08_RS05700	PF10953	SH08_RS05700
SH08_RS05705	PF01820	D-ala D-ala ligase N-terminus
SH08_RS05705	PF07478	D-ala D-ala ligase C-terminus
SH08_RS05715	PF10796	SH08_RS05715
SH08_RS05720	PF00245	Alkaline phosphatase
SH08_RS05725	PF07769	SH08_RS05725
SH08_RS05730	PF00990	GGDEF domain
SH08_RS05730	PF05230	SH08_RS05730
SH08_RS05735	PF03807	NADP oxidoreductase coenzyme F420-dependent
SH08_RS05735	PF14748	Pyrroline-5-carboxylate reductase dimerisation
SH08_RS05740	PF02639	SH08_RS05740
SH08_RS05745	PF01202	Shikimate kinase
SH08_RS05750	PF16362	SH08_RS05750
SH08_RS05760	PF07302	SH08_RS05760
SH08_RS05765	PF06865	Protein of unknown function (DUF1255)
SH08_RS05770	PF10971	SH08_RS05770
SH08_RS05775	PF04381	Putative exonuclease, RdgC
SH08_RS05780	PF00480	ROK family
SH08_RS05785	PF07690	Major Facilitator Superfamily
SH08_RS05790	PF13476	AAA domain
SH08_RS05790	PF13558	Putative exonuclease SbcCD, C subunit
SH08_RS05795	PF00149	Calcineurin-like phosphoesterase
SH08_RS05795	PF12320	Type 5 capsule protein repressor C-terminal domain
SH08_RS05800	PF00072	Response regulator receiver domain
SH08_RS05800	PF00486	Transcriptional regulatory protein, C terminal
SH08_RS05805	PF00512	His Kinase A (phospho-acceptor) domain
SH08_RS05805	PF00989	PAS fold
SH08_RS05805	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH08_RS05805	PF11808	SH08_RS05805
SH08_RS05810	PF05525	SH08_RS05810
SH08_RS05815	PF00324	Amino acid permease
SH08_RS05820	PF00128	Alpha amylase, catalytic domain
SH08_RS05820	PF02903	Alpha amylase, N-terminal ig-like domain
SH08_RS05825	PF04336	SH08_RS05825
SH08_RS05830	PF02547	Queuosine biosynthesis protein
SH08_RS05835	PF01702	Queuine tRNA-ribosyltransferase
SH08_RS05840	PF02699	Preprotein translocase subunit
SH08_RS05845	PF02355	Protein export membrane protein
SH08_RS05845	PF07549	SecD/SecF GG Motif
SH08_RS05845	PF13721	SecD export protein N-terminal TM region
SH08_RS05850	PF02355	Protein export membrane protein
SH08_RS05850	PF07549	SecD/SecF GG Motif
SH08_RS05855	PF01844	HNH endonuclease
SH08_RS05860	PF12035	SH08_RS05860
SH08_RS05865	PF03502	Nucleoside-specific channel-forming protein, Tsx
SH08_RS05870	PF11622	Protein of unknown function (DUF3251)
SH08_RS05875	PF03477	ATP cone domain
SH08_RS05880	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
SH08_RS05880	PF01872	RibD C-terminal domain
SH08_RS05885	PF00885	6,7-dimethyl-8-ribityllumazine synthase
SH08_RS05890	PF01029	NusB family
SH08_RS05895	PF00586	AIR synthase related protein, N-terminal domain
SH08_RS05895	PF02769	AIR synthase related protein, C-terminal domain
SH08_RS05900	PF04608	Phosphatidylglycerophosphatase A
SH08_RS05905	PF00248	Aldo/keto reductase family
SH08_RS05910	PF02779	Transketolase, pyrimidine binding domain
SH08_RS05910	PF02780	Transketolase, C-terminal domain
SH08_RS05910	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
SH08_RS05915	PF00348	Polyprenyl synthetase
SH08_RS05920	PF02609	Exonuclease VII small subunit
SH08_RS05925	PF02568	Thiamine biosynthesis protein (ThiI)
SH08_RS05925	PF02926	THUMP domain
SH08_RS05930	PF01965	DJ-1/PfpI family
SH08_RS05935	PF02558	Ketopantoate reductase PanE/ApbA
SH08_RS05935	PF08546	Ketopantoate reductase PanE/ApbA C terminal
SH08_RS05940	PF04461	Protein of unknown function (DUF520)
SH08_RS05945	PF07690	Major Facilitator Superfamily
SH08_RS05950	PF01040	UbiA prenyltransferase family
SH08_RS05955	PF03626	SH08_RS05955
SH08_RS05960	PF00510	Cytochrome c oxidase subunit III
SH08_RS05965	PF00115	Cytochrome C and Quinol oxidase polypeptide I
SH08_RS05970	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
SH08_RS05970	PF06481	COX Aromatic Rich Motif
SH08_RS05975	PF07690	Major Facilitator Superfamily
SH08_RS05980	PF03923	SH08_RS05980
SH08_RS05980	PF08139	SH08_RS05980
SH08_RS05985	PF01722	BolA-like protein
SH08_RS05995	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
SH08_RS05995	PF05697	Bacterial trigger factor protein (TF)
SH08_RS05995	PF05698	Bacterial trigger factor protein (TF) C-terminus
SH08_RS06000	PF00574	Clp protease
SH08_RS06005	PF06689	ClpX C4-type zinc finger
SH08_RS06005	PF07724	AAA domain (Cdc48 subfamily)
SH08_RS06005	PF10431	C-terminal, D2-small domain, of ClpB protein
SH08_RS06010	PF00004	ATPase family associated with various cellular activities (AAA)
SH08_RS06010	PF02190	ATP-dependent protease La (LON) domain
SH08_RS06010	PF05362	Lon protease (S16) C-terminal proteolytic domain
SH08_RS06015	PF00216	Bacterial DNA-binding protein
SH08_RS06020	PF13145	PPIC-type PPIASE domain
SH08_RS06020	PF13624	SurA N-terminal domain
SH08_RS06025	PF12836	Helix-hairpin-helix motif
SH08_RS06030	PF13279	Thioesterase-like superfamily
SH08_RS06035	PF06508	Queuosine biosynthesis protein QueC
SH08_RS06040	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
SH08_RS06040	PF12793	SH08_RS06040
SH08_RS06045	PF08282	haloacid dehalogenase-like hydrolase
SH08_RS06050	PF01037	AsnC family
SH08_RS06050	PF13404	AsnC-type helix-turn-helix domain
SH08_RS06055	PF00005	ABC transporter
SH08_RS06055	PF00664	ABC transporter transmembrane region
SH08_RS06060	PF00005	ABC transporter
SH08_RS06060	PF00664	ABC transporter transmembrane region
SH08_RS06065	PF00543	Nitrogen regulatory protein P-II
SH08_RS06070	PF00909	Ammonium Transporter Family
SH08_RS06075	PF13622	Thioesterase-like superfamily
SH08_RS06080	PF09619	Type III secretion system lipoprotein chaperone (YscW)
SH08_RS06085	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
SH08_RS06090	PF07237	Protein of unknown function (DUF1428)
SH08_RS06095	PF00563	EAL domain
SH08_RS06095	PF12792	SH08_RS06095
SH08_RS06100	PF10777	SH08_RS06100
SH08_RS06105	PF12464	Maltose acetyltransferase
SH08_RS06105	PF14602	Hexapeptide repeat of succinyl-transferase
SH08_RS06110	PF05321	Haemolysin expression modulating protein
SH08_RS06115	PF10757	SH08_RS06115
SH08_RS06120	PF00873	AcrB/AcrD/AcrF family
SH08_RS06125	PF00529	HlyD family secretion protein
SH08_RS06125	PF16576	SH08_RS06125
SH08_RS06130	PF00440	Bacterial regulatory proteins, tetR family
SH08_RS06130	PF08361	MAATS-type transcriptional repressor, C-terminal region
SH08_RS06135	PF00924	Mechanosensitive ion channel
SH08_RS06135	PF12794	SH08_RS06135
SH08_RS06135	PF12795	SH08_RS06135
SH08_RS06140	PF12035	SH08_RS06140
SH08_RS06145	PF10689	SH08_RS06145
SH08_RS06150	PF07445	Primosomal replication protein priB and priC
SH08_RS06155	PF04304	SH08_RS06155
SH08_RS06160	PF00156	Phosphoribosyl transferase domain
SH08_RS06165	PF12168	SH08_RS06165
SH08_RS06165	PF12169	DNA polymerase III subunits gamma and tau domain III
SH08_RS06165	PF12170	DNA polymerase III tau subunit V interacting with alpha
SH08_RS06165	PF13177	DNA polymerase III, delta subunit
SH08_RS06170	PF02575	YbaB/EbfC DNA-binding family
SH08_RS06175	PF02132	RecR protein
SH08_RS06175	PF13662	Toprim domain
SH08_RS06180	PF00183	Hsp90 protein
SH08_RS06180	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH08_RS06185	PF00406	Adenylate kinase
SH08_RS06185	PF05191	Adenylate kinase, active site lid
SH08_RS06190	PF00762	Ferrochelatase
SH08_RS06195	PF07859	alpha/beta hydrolase fold
SH08_RS06200	PF00294	pfkB family carbohydrate kinase
SH08_RS06205	PF00999	Sodium/hydrogen exchanger family
SH08_RS06205	PF02254	TrkA-N domain
SH08_RS06210	PF07690	Major Facilitator Superfamily
SH08_RS06215	PF00149	Calcineurin-like phosphoesterase
SH08_RS06215	PF02872	5'-nucleotidase, C-terminal domain
SH08_RS06220	PF04073	Aminoacyl-tRNA editing domain
SH08_RS06225	PF01963	SH08_RS06225
SH08_RS06230	PF01381	Helix-turn-helix
SH08_RS06235	PF00122	E1-E2 ATPase
SH08_RS06235	PF00403	Heavy-metal-associated domain
SH08_RS06235	PF00702	haloacid dehalogenase-like hydrolase
SH08_RS06240	PF04960	Glutaminase
SH08_RS06245	PF13520	Amino acid permease
SH08_RS06250	PF13411	MerR HTH family regulatory protein
SH08_RS06255	PF01957	NfeD-like C-terminal, partner-binding
SH08_RS06260	PF01145	SPFH domain / Band 7 family
SH08_RS06260	PF16200	SH08_RS06260
SH08_RS06265	PF00005	ABC transporter
SH08_RS06270	PF03649	SH08_RS06270
SH08_RS06275	PF00085	Thioredoxin
SH08_RS06275	PF14559	Tetratricopeptide repeat
SH08_RS06275	PF14561	Tetratricopeptide repeat
SH08_RS06280	PF00106	short chain dehydrogenase
SH08_RS06285	PF13472	GDSL-like Lipase/Acylhydrolase family
SH08_RS06290	PF00005	ABC transporter
SH08_RS06295	PF02687	SH08_RS06295
SH08_RS06300	PF03527	SH08_RS06300
SH08_RS06300	PF05593	SH08_RS06300
SH08_RS06300	PF14220	SH08_RS06300
SH08_RS06305	PF15631	SH08_RS06305
SH08_RS06310	PF03527	SH08_RS06310
SH08_RS06320	PF13551	Winged helix-turn helix
SH08_RS06330	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS06330	PF03466	LysR substrate binding domain
SH08_RS06335	PF04115	Ureidoglycolate hydrolase
SH08_RS06340	PF01614	Bacterial transcriptional regulator
SH08_RS06340	PF09339	IclR helix-turn-helix domain
SH08_RS06345	PF00205	Thiamine pyrophosphate enzyme, central domain
SH08_RS06345	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
SH08_RS06345	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
SH08_RS06350	PF01261	Xylose isomerase-like TIM barrel
SH08_RS06355	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
SH08_RS06355	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
SH08_RS06360	PF02133	Permease for cytosine/purines, uracil, thiamine, allantoin
SH08_RS06365	PF01979	Amidohydrolase family
SH08_RS06370	PF00860	Permease family
SH08_RS06375	PF02595	Glycerate kinase family
SH08_RS06380	PF05899	Protein of unknown function (DUF861)
SH08_RS06380	PF07883	Cupin domain
SH08_RS06385	PF01546	Peptidase family M20/M25/M40
SH08_RS06390	PF02615	Malate/L-lactate dehydrogenase
SH08_RS06395	PF00549	CoA-ligase
SH08_RS06395	PF02629	CoA binding domain
SH08_RS06400	PF06545	Protein of unknown function (DUF1116)
SH08_RS06405	PF11392	SH08_RS06405
SH08_RS06410	PF00696	Amino acid kinase family
SH08_RS06415	PF02222	ATP-grasp domain
SH08_RS06420	PF00731	AIR carboxylase
SH08_RS06425	PF12850	Calcineurin-like phosphoesterase superfamily domain
SH08_RS06430	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
SH08_RS06435	PF01406	tRNA synthetases class I (C) catalytic domain
SH08_RS06435	PF09190	DALR domain
SH08_RS06440	PF04307	SH08_RS06440
SH08_RS06445	PF13275	S4 domain
SH08_RS06450	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
SH08_RS06450	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
SH08_RS06455	PF00419	Fimbrial protein
SH08_RS06460	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
SH08_RS06460	PF02753	Pili assembly chaperone PapD, C-terminal domain
SH08_RS06465	PF00577	Outer membrane usher protein
SH08_RS06465	PF13953	PapC C-terminal domain
SH08_RS06465	PF13954	PapC N-terminal domain
SH08_RS06470	PF00419	Fimbrial protein
SH08_RS06475	PF00419	Fimbrial protein
SH08_RS06480	PF00072	Response regulator receiver domain
SH08_RS06480	PF00196	Bacterial regulatory proteins, luxR family
SH08_RS06490	PF00589	Phage integrase family
SH08_RS06500	PF06992	SH08_RS06500
SH08_RS06510	PF01527	Transposase
SH08_RS06515	PF00665	Integrase core domain
SH08_RS06515	PF13276	SH08_RS06515
SH08_RS06525	PF00893	Small Multidrug Resistance protein
SH08_RS06535	PF00239	Resolvase, N terminal domain
SH08_RS06535	PF07508	Recombinase
SH08_RS06535	PF13408	Recombinase zinc beta ribbon domain
SH08_RS06540	PF01161	Phosphatidylethanolamine-binding protein
SH08_RS06545	PF12833	Helix-turn-helix domain
SH08_RS06560	PF07102	Protein of unknown function (DUF1364)
SH08_RS06565	PF05866	Endodeoxyribonuclease RusA
SH08_RS06575	PF06530	SH08_RS06575
SH08_RS06585	PF01609	Transposase DDE domain
SH08_RS06585	PF05598	SH08_RS06585
SH08_RS06590	PF07166	Protein of unknown function (DUF1398)
SH08_RS06600	PF13132	SH08_RS06600
SH08_RS06615	PF03400	SH08_RS06615
SH08_RS06620	PF07471	Phage DNA packaging protein Nu1
SH08_RS06625	PF02413	SH08_RS06625
SH08_RS06625	PF05876	SH08_RS06625
SH08_RS06640	PF12833	Helix-turn-helix domain
SH08_RS06645	PF01278	Omptin family
SH08_RS06655	PF12833	Helix-turn-helix domain
SH08_RS06660	PF14488	Domain of unknown function (DUF4434)
SH08_RS06665	PF13283	SH08_RS06665
SH08_RS06665	PF13429	Tetratricopeptide repeat
SH08_RS06670	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
SH08_RS06670	PF13632	Glycosyl transferase family group 2
SH08_RS06675	PF00512	His Kinase A (phospho-acceptor) domain
SH08_RS06675	PF00672	HAMP domain
SH08_RS06675	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH08_RS06680	PF00072	Response regulator receiver domain
SH08_RS06680	PF00486	Transcriptional regulatory protein, C terminal
SH08_RS06685	PF02321	Outer membrane efflux protein
SH08_RS06690	PF11604	Copper binding periplasmic protein CusF
SH08_RS06695	PF00529	HlyD family secretion protein
SH08_RS06695	PF16576	SH08_RS06695
SH08_RS06700	PF00873	AcrB/AcrD/AcrF family
SH08_RS06705	PF00324	Amino acid permease
SH08_RS06710	PF00924	Mechanosensitive ion channel
SH08_RS06715	PF00881	Nitroreductase family
SH08_RS06720	PF04237	YjbR
SH08_RS06725	PF06643	SH08_RS06725
SH08_RS06730	PF04107	Glutamate-cysteine ligase family 2(GCS2)
SH08_RS06740	PF01848	SH08_RS06740
SH08_RS06745	PF01609	Transposase DDE domain
SH08_RS06750	PF01648	4'-phosphopantetheinyl transferase superfamily
SH08_RS06755	PF00593	TonB dependent receptor
SH08_RS06755	PF07715	TonB-dependent Receptor Plug Domain
SH08_RS06760	PF00756	Putative esterase
SH08_RS06760	PF11806	Domain of unknown function (DUF3327)
SH08_RS06765	PF03621	MbtH-like protein
SH08_RS06770	PF00501	AMP-binding enzyme
SH08_RS06770	PF00550	Phosphopantetheine attachment site
SH08_RS06770	PF00668	Condensation domain
SH08_RS06770	PF00975	Thioesterase domain
SH08_RS06775	PF02706	Chain length determinant protein
SH08_RS06780	PF00005	ABC transporter
SH08_RS06785	PF01032	FecCD transport family
SH08_RS06795	PF05977	Transmembrane secretion effector
SH08_RS06800	PF01497	Periplasmic binding protein
SH08_RS06805	PF00425	chorismate binding enzyme
SH08_RS06810	PF00501	AMP-binding enzyme
SH08_RS06810	PF13193	AMP-binding enzyme C-terminal domain
SH08_RS06815	PF00550	Phosphopantetheine attachment site
SH08_RS06815	PF00857	Isochorismatase family
SH08_RS06820	PF13561	Enoyl-(Acyl carrier protein) reductase
SH08_RS06825	PF03061	Thioesterase superfamily
SH08_RS06830	PF02554	SH08_RS06830
SH08_RS06830	PF13722	SH08_RS06830
SH08_RS06835	PF04328	SH08_RS06835
SH08_RS06840	PF00465	Iron-containing alcohol dehydrogenase
SH08_RS06845	PF00155	Aminotransferase class I and II
SH08_RS06850	PF02195	ParB-like nuclease domain
SH08_RS06855	PF01507	Phosphoadenosine phosphosulfate reductase family
SH08_RS06855	PF11922	SH08_RS06855
SH08_RS06860	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS06860	PF03466	LysR substrate binding domain
SH08_RS06865	PF13098	Thioredoxin-like domain
SH08_RS06870	PF00578	AhpC/TSA family
SH08_RS06870	PF10417	C-terminal domain of 1-Cys peroxiredoxin
SH08_RS06875	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SH08_RS06875	PF13192	Thioredoxin domain
SH08_RS06880	PF00582	Universal stress protein family
SH08_RS06885	PF00107	Zinc-binding dehydrogenase
SH08_RS06885	PF08240	Alcohol dehydrogenase GroES-like domain
SH08_RS06885	PF13823	Alcohol dehydrogenase GroES-associated
SH08_RS06895	PF01272	Transcription elongation factor, GreA/GreB, C-term
SH08_RS06895	PF14760	Rnk N-terminus
SH08_RS06900	PF00445	Ribonuclease T2 family
SH08_RS06905	PF00939	Sodium:sulfate symporter transmembrane region
SH08_RS06910	PF01874	ATP:dephospho-CoA triphosphoribosyl transferase
SH08_RS06915	PF03802	SH08_RS06915
SH08_RS06920	PF04223	Citrate lyase, alpha subunit (CitF)
SH08_RS06925	PF03328	HpcH/HpaI aldolase/citrate lyase family
SH08_RS06930	PF06857	SH08_RS06930
SH08_RS06935	PF08218	Citrate lyase ligase C-terminal domain
SH08_RS06940	PF00989	PAS fold
SH08_RS06940	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH08_RS06940	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
SH08_RS06940	PF17203	SH08_RS06940
SH08_RS06945	PF00072	Response regulator receiver domain
SH08_RS06945	PF12431	SH08_RS06945
SH08_RS06950	PF03606	SH08_RS06950
SH08_RS06955	PF07017	Antimicrobial peptide resistance and lipid A acylation protein PagP
SH08_RS06960	PF00313	'Cold-shock' DNA-binding domain
SH08_RS06965	PF02537	SH08_RS06965
SH08_RS06975	PF02416	mttA/Hcf106 family
SH08_RS06980	PF04055	Radical SAM superfamily
SH08_RS06980	PF16881	SH08_RS06980
SH08_RS06985	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS06985	PF03466	LysR substrate binding domain
SH08_RS06995	PF03099	Biotin/lipoate A/B protein ligase family
SH08_RS07000	PF04359	Protein of unknown function (DUF493)
SH08_RS07005	PF00768	D-alanyl-D-alanine carboxypeptidase
SH08_RS07005	PF07943	Penicillin-binding protein 5, C-terminal domain
SH08_RS07010	PF03330	Rare lipoprotein A (RlpA)-like double-psi beta-barrel
SH08_RS07010	PF05036	Sporulation related domain
SH08_RS07015	PF01098	SH08_RS07015
SH08_RS07020	PF00905	Penicillin binding protein transpeptidase domain
SH08_RS07020	PF03717	Penicillin-binding Protein dimerisation domain
SH08_RS07025	PF02590	Predicted SPOUT methyltransferase
SH08_RS07030	PF02410	Oligomerisation domain
SH08_RS07035	PF00300	Histidine phosphatase superfamily (branch 1)
SH08_RS07040	PF01467	Cytidylyltransferase
SH08_RS07045	PF06144	DNA polymerase III, delta subunit
SH08_RS07045	PF14840	Processivity clamp loader gamma complex DNA pol III C-term
SH08_RS07050	PF04390	Lipopolysaccharide-assembly
SH08_RS07055	PF00133	tRNA synthetases class I (I, L, M and V)
SH08_RS07055	PF08264	Anticodon-binding domain of tRNA
SH08_RS07055	PF13603	Leucyl-tRNA synthetase, Domain 2
SH08_RS07060	PF07295	SH08_RS07060
SH08_RS07065	PF08238	Sel1 repeat
SH08_RS07070	PF06889	SH08_RS07070
SH08_RS07080	PF08238	Sel1 repeat
SH08_RS07085	PF06889	SH08_RS07085
SH08_RS07095	PF00012	Hsp70 protein
SH08_RS07100	PF01156	Inosine-uridine preferring nucleoside hydrolase
SH08_RS07105	PF00005	ABC transporter
SH08_RS07110	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS07115	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS07120	PF00497	Bacterial extracellular solute-binding proteins, family 3
SH08_RS07125	PF01609	Transposase DDE domain
SH08_RS07125	PF05598	SH08_RS07125
SH08_RS07130	PF00795	Carbon-nitrogen hydrolase
SH08_RS07135	PF00571	CBS domain
SH08_RS07135	PF03471	Transporter associated domain
SH08_RS07140	PF02130	Uncharacterized protein family UPF0054
SH08_RS07145	PF02562	PhoH-like protein
SH08_RS07150	PF00919	Uncharacterized protein family UPF0004
SH08_RS07150	PF01938	TRAM domain
SH08_RS07150	PF04055	Radical SAM superfamily
SH08_RS07155	PF01494	FAD binding domain
SH08_RS07195	PF00733	Asparagine synthase
SH08_RS07195	PF13537	Glutamine amidotransferase domain
SH08_RS07200	PF13242	HAD-hyrolase-like
SH08_RS07200	PF13344	Haloacid dehalogenase-like hydrolase
SH08_RS07205	PF00480	ROK family
SH08_RS07205	PF01047	MarR family
SH08_RS07210	PF01979	Amidohydrolase family
SH08_RS07215	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
SH08_RS07220	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
SH08_RS07220	PF00367	phosphotransferase system, EIIB
SH08_RS07220	PF02378	Phosphotransferase system, EIIC
SH08_RS07225	PF00749	tRNA synthetases class I (E and Q), catalytic domain
SH08_RS07225	PF03950	tRNA synthetases class I (E and Q), anti-codon binding domain
SH08_RS07230	PF03573	outer membrane porin, OprD family
SH08_RS07235	PF13982	SH08_RS07235
SH08_RS07240	PF01475	Ferric uptake regulator family
SH08_RS07255	PF00258	Flavodoxin
SH08_RS07260	PF01402	Ribbon-helix-helix protein, copG family
SH08_RS07265	PF12697	Alpha/beta hydrolase family
SH08_RS07270	PF03925	SeqA protein
SH08_RS07275	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
SH08_RS07275	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
SH08_RS07275	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
SH08_RS07275	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
SH08_RS07290	PF03400	SH08_RS07290
SH08_RS07300	PF13520	Amino acid permease
SH08_RS07305	PF01276	Orn/Lys/Arg decarboxylase, major domain
SH08_RS07305	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
SH08_RS07305	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
SH08_RS07315	PF00072	Response regulator receiver domain
SH08_RS07315	PF00486	Transcriptional regulatory protein, C terminal
SH08_RS07320	PF00512	His Kinase A (phospho-acceptor) domain
SH08_RS07320	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH08_RS07320	PF02702	Osmosensitive K+ channel His kinase sensor domain
SH08_RS07320	PF13492	GAF domain
SH08_RS07320	PF13493	Domain of unknown function (DUF4118)
SH08_RS07325	PF02669	SH08_RS07325
SH08_RS07330	PF00122	E1-E2 ATPase
SH08_RS07330	PF00702	haloacid dehalogenase-like hydrolase
SH08_RS07335	PF03814	SH08_RS07335
SH08_RS07340	PF09604	SH08_RS07340
SH08_RS07345	PF10725	SH08_RS07345
SH08_RS07350	PF03527	SH08_RS07350
SH08_RS07350	PF05593	SH08_RS07350
SH08_RS07360	PF03527	SH08_RS07360
SH08_RS07360	PF05593	SH08_RS07360
SH08_RS07370	PF13808	SH08_RS07370
SH08_RS07375	PF01609	Transposase DDE domain
SH08_RS07375	PF13808	SH08_RS07375
SH08_RS07380	PF01609	Transposase DDE domain
SH08_RS07380	PF13808	SH08_RS07380
SH08_RS07385	PF08349	SH08_RS07385
SH08_RS07390	PF00875	DNA photolyase
SH08_RS07390	PF03441	FAD binding domain of DNA photolyase
SH08_RS07395	PF00854	POT family
SH08_RS07400	PF01784	NIF3 (NGG1p interacting factor 3)
SH08_RS07405	PF02682	Allophanate hydrolase subunit 1
SH08_RS07410	PF02626	Allophanate hydrolase subunit 2
SH08_RS07415	PF03746	LamB/YcsF family
SH08_RS07420	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
SH08_RS07420	PF06827	Zinc finger found in FPG and IleRS
SH08_RS07420	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
SH08_RS07425	PF05145	SH08_RS07425
SH08_RS07430	PF00419	Fimbrial protein
SH08_RS07435	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
SH08_RS07435	PF02753	Pili assembly chaperone PapD, C-terminal domain
SH08_RS07440	PF00577	Outer membrane usher protein
SH08_RS07440	PF13953	PapC C-terminal domain
SH08_RS07440	PF13954	PapC N-terminal domain
SH08_RS07445	PF00419	Fimbrial protein
SH08_RS07450	PF00285	Citrate synthase
SH08_RS07460	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
SH08_RS07465	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
SH08_RS07470	PF00890	FAD binding domain
SH08_RS07470	PF02910	Fumarate reductase flavoprotein C-term
SH08_RS07475	PF13085	2Fe-2S iron-sulfur cluster binding domain
SH08_RS07475	PF13534	4Fe-4S dicluster domain
SH08_RS07485	PF00676	Dehydrogenase E1 component
SH08_RS07485	PF02779	Transketolase, pyrimidine binding domain
SH08_RS07485	PF16078	SH08_RS07485
SH08_RS07485	PF16870	SH08_RS07485
SH08_RS07490	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
SH08_RS07490	PF00364	Biotin-requiring enzyme
SH08_RS07490	PF02817	e3 binding domain
SH08_RS07495	PF00549	CoA-ligase
SH08_RS07495	PF08442	ATP-grasp domain
SH08_RS07500	PF00549	CoA-ligase
SH08_RS07500	PF02629	CoA binding domain
SH08_RS07505	PF00392	Bacterial regulatory proteins, gntR family
SH08_RS07505	PF07702	UTRA domain
SH08_RS07510	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
SH08_RS07510	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
SH08_RS07510	PF02378	Phosphotransferase system, EIIC
SH08_RS07515	PF01074	Glycosyl hydrolases family 38 N-terminal domain
SH08_RS07515	PF07748	Glycosyl hydrolases family 38 C-terminal domain
SH08_RS07515	PF09261	Alpha mannosidase, middle domain
SH08_RS07525	PF01654	SH08_RS07525
SH08_RS07530	PF02322	SH08_RS07530
SH08_RS07535	PF08173	SH08_RS07535
SH08_RS07540	PF09600	SH08_RS07540
SH08_RS07545	PF03061	Thioesterase superfamily
SH08_RS07550	PF01618	SH08_RS07550
SH08_RS07555	PF02472	Biopolymer transport protein ExbD/TolR
SH08_RS07560	PF06519	TolA C-terminal
SH08_RS07565	PF04052	TolB amino-terminal domain
SH08_RS07565	PF07676	WD40-like Beta Propeller Repeat
SH08_RS07570	PF00691	OmpA family
SH08_RS07575	PF13174	Tetratricopeptide repeat
SH08_RS07575	PF13432	Tetratricopeptide repeat
SH08_RS07575	PF16331	SH08_RS07575
SH08_RS07615	PF02445	Quinolinate synthetase A protein
SH08_RS07620	PF04973	SH08_RS07620
SH08_RS07625	PF01545	Cation efflux family
SH08_RS07630	PF13985	SH08_RS07630
SH08_RS07640	PF00793	DAHP synthetase I family
SH08_RS07645	PF00300	Histidine phosphatase superfamily (branch 1)
SH08_RS07650	PF01263	Aldose 1-epimerase
SH08_RS07655	PF00288	GHMP kinases N terminal domain
SH08_RS07655	PF08544	GHMP kinases C terminal
SH08_RS07655	PF10509	Galactokinase galactose-binding signature
SH08_RS07660	PF01087	Galactose-1-phosphate uridyl transferase, N-terminal domain
SH08_RS07660	PF02744	Galactose-1-phosphate uridyl transferase, C-terminal domain
SH08_RS07665	PF16363	SH08_RS07665
SH08_RS07670	PF00005	ABC transporter
SH08_RS07675	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS07675	PF03459	TOBE domain
SH08_RS07680	PF10766	Protein of unknown function (DUF2592)
SH08_RS07685	PF13531	Bacterial extracellular solute-binding protein
SH08_RS07690	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS07695	PF00005	ABC transporter
SH08_RS07695	PF03459	TOBE domain
SH08_RS07700	PF08282	haloacid dehalogenase-like hydrolase
SH08_RS07705	PF10282	Lactonase, 7-bladed beta-propeller
SH08_RS07710	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS07710	PF03466	LysR substrate binding domain
SH08_RS07715	PF04303	PrpF protein
SH08_RS07720	PF00939	Sodium:sulfate symporter transmembrane region
SH08_RS07725	PF00330	Aconitase family (aconitate hydratase)
SH08_RS07725	PF00694	Aconitase C-terminal domain
SH08_RS07730	PF01095	Pectinesterase
SH08_RS07735	PF01161	Phosphatidylethanolamine-binding protein
SH08_RS07740	PF00202	Aminotransferase class-III
SH08_RS07745	PF04055	Radical SAM superfamily
SH08_RS07745	PF06968	Biotin and Thiamin Synthesis associated domain
SH08_RS07750	PF00155	Aminotransferase class I and II
SH08_RS07755	PF08241	Methyltransferase domain
SH08_RS07760	PF13500	AAA domain
SH08_RS07765	PF00271	Helicase conserved C-terminal domain
SH08_RS07765	PF02151	UvrB/uvrC motif
SH08_RS07765	PF04851	Type III restriction enzyme, res subunit
SH08_RS07765	PF12344	Ultra-violet resistance protein B
SH08_RS07770	PF01933	Uncharacterised protein family UPF0052
SH08_RS07780	PF04055	Radical SAM superfamily
SH08_RS07780	PF06463	Molybdenum Cofactor Synthesis C
SH08_RS07780	PF13353	4Fe-4S single cluster domain
SH08_RS07785	PF00994	Probable molybdopterin binding domain
SH08_RS07790	PF01967	MoaC family
SH08_RS07795	PF02597	ThiS family
SH08_RS07800	PF02391	MoaE protein
SH08_RS07805	PF01027	Inhibitor of apoptosis-promoting Bax1
SH08_RS07810	PF01027	Inhibitor of apoptosis-promoting Bax1
SH08_RS07815	PF03706	SH08_RS07815
SH08_RS07820	PF13091	PLD-like domain
SH08_RS07825	PF03372	Endonuclease/Exonuclease/phosphatase family
SH08_RS07830	PF11076	SH08_RS07830
SH08_RS07835	PF12698	ABC-2 family transporter protein
SH08_RS07840	PF12698	ABC-2 family transporter protein
SH08_RS07845	PF00005	ABC transporter
SH08_RS07850	PF16576	SH08_RS07850
SH08_RS07855	PF00440	Bacterial regulatory proteins, tetR family
SH08_RS07855	PF09209	Domain of unknown function (DUF1956)
SH08_RS07860	PF00270	DEAD/DEAH box helicase
SH08_RS07860	PF00271	Helicase conserved C-terminal domain
SH08_RS07865	PF08719	Domain of unknown function (DUF1768)
SH08_RS07870	PF00270	DEAD/DEAH box helicase
SH08_RS07870	PF06733	DEAD_2
SH08_RS07870	PF13307	Helicase C-terminal domain
SH08_RS07875	PF02885	Glycosyl transferase family, helical bundle domain
SH08_RS07880	PF02615	Malate/L-lactate dehydrogenase
SH08_RS07885	PF07338	Protein of unknown function (DUF1471)
SH08_RS07890	PF01258	Prokaryotic dksA/traR C4-type zinc finger
SH08_RS07895	PF13640	2OG-Fe(II) oxygenase superfamily
SH08_RS07900	PF00593	TonB dependent receptor
SH08_RS07900	PF07715	TonB-dependent Receptor Plug Domain
SH08_RS07905	PF07338	Protein of unknown function (DUF1471)
SH08_RS07910	PF05971	Protein of unknown function (DUF890)
SH08_RS07915	PF00924	Mechanosensitive ion channel
SH08_RS07920	PF00005	ABC transporter
SH08_RS07925	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS07930	PF00497	Bacterial extracellular solute-binding proteins, family 3
SH08_RS07940	PF00210	Ferritin-like domain
SH08_RS07950	PF13505	Outer membrane protein beta-barrel domain
SH08_RS07955	PF00884	Sulfatase
SH08_RS07965	PF01325	Iron dependent repressor, N-terminal DNA binding domain
SH08_RS07965	PF02742	Iron dependent repressor, metal binding and dimerisation domain
SH08_RS07970	PF03600	Citrate transporter
SH08_RS07975	PF03734	L,D-transpeptidase catalytic domain
SH08_RS07980	PF00005	ABC transporter
SH08_RS07980	PF12848	ABC transporter
SH08_RS07985	PF07350	Protein of unknown function (DUF1479)
SH08_RS07990	PF08282	haloacid dehalogenase-like hydrolase
SH08_RS07995	PF01228	Glycine radical
SH08_RS07995	PF02901	Pyruvate formate lyase
SH08_RS08000	PF04055	Radical SAM superfamily
SH08_RS08000	PF13353	4Fe-4S single cluster domain
SH08_RS08005	PF00923	Transaldolase
SH08_RS08010	PF00899	ThiF family
SH08_RS08015	PF00994	Probable molybdopterin binding domain
SH08_RS08015	PF03453	MoeA N-terminal region (domain I and II)
SH08_RS08015	PF03454	MoeA C-terminal region (domain IV)
SH08_RS08020	PF01112	Asparaginase
SH08_RS08025	PF00005	ABC transporter
SH08_RS08025	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
SH08_RS08030	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
SH08_RS08035	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS08040	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS08040	PF12911	SH08_RS08040
SH08_RS08050	PF00990	GGDEF domain
SH08_RS08050	PF17156	SH08_RS08050
SH08_RS08055	PF00919	Uncharacterized protein family UPF0004
SH08_RS08055	PF04055	Radical SAM superfamily
SH08_RS08060	PF10799	SH08_RS08060
SH08_RS08065	PF07995	Glucose / Sorbosone dehydrogenase
SH08_RS08070	PF00043	Glutathione S-transferase, C-terminal domain
SH08_RS08070	PF02798	Glutathione S-transferase, N-terminal domain
SH08_RS08075	PF00768	D-alanyl-D-alanine carboxypeptidase
SH08_RS08075	PF07943	Penicillin-binding protein 5, C-terminal domain
SH08_RS08080	PF00455	SH08_RS08080
SH08_RS08080	PF08220	DeoR-like helix-turn-helix domain
SH08_RS08085	PF01569	PAP2 superfamily
SH08_RS08090	PF07690	Major Facilitator Superfamily
SH08_RS08100	PF08282	haloacid dehalogenase-like hydrolase
SH08_RS08105	PF07690	Major Facilitator Superfamily
SH08_RS08110	PF00440	Bacterial regulatory proteins, tetR family
SH08_RS08115	PF02080	TrkA-C domain
SH08_RS08115	PF06826	SH08_RS08115
SH08_RS08120	PF11045	SH08_RS08120
SH08_RS08125	PF00462	Glutaredoxin
SH08_RS08130	PF07214	SH08_RS08130
SH08_RS08135	PF00881	Nitroreductase family
SH08_RS08140	PF08443	RimK-like ATP-grasp domain
SH08_RS08145	PF10722	Putative bacterial sensory transduction regulator
SH08_RS08155	PF13416	Bacterial extracellular solute-binding protein
SH08_RS08160	PF00005	ABC transporter
SH08_RS08160	PF08402	TOBE domain
SH08_RS08165	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS08170	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS08175	PF10767	SH08_RS08175
SH08_RS08180	PF05958	tRNA (Uracil-5-)-methyltransferase
SH08_RS08185	PF00497	Bacterial extracellular solute-binding proteins, family 3
SH08_RS08190	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS08195	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS08200	PF00497	Bacterial extracellular solute-binding proteins, family 3
SH08_RS08205	PF00005	ABC transporter
SH08_RS08210	PF12883	Protein of unknown function (DUF3828)
SH08_RS08215	PF01906	Putative heavy-metal-binding
SH08_RS08220	PF01510	N-acetylmuramoyl-L-alanine amidase
SH08_RS08225	PF01370	NAD dependent epimerase/dehydratase family
SH08_RS08230	PF11066	SH08_RS08230
SH08_RS08230	PF13460	NADH(P)-binding
SH08_RS08235	PF01212	Beta-eliminating lyase
SH08_RS08240	PF00205	Thiamine pyrophosphate enzyme, central domain
SH08_RS08240	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
SH08_RS08240	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
SH08_RS08245	PF00111	2Fe-2S iron-sulfur cluster binding domain
SH08_RS08245	PF00175	Oxidoreductase NAD-binding domain
SH08_RS08245	PF00970	Oxidoreductase FAD-binding domain
SH08_RS08250	PF03063	Prismane/CO dehydrogenase family
SH08_RS08255	PF03956	SH08_RS08255
SH08_RS08260	PF00230	Major intrinsic protein
SH08_RS08270	PF11398	Protein of unknown function (DUF2813)
SH08_RS08275	PF04393	SH08_RS08275
SH08_RS08280	PF16576	SH08_RS08280
SH08_RS08285	PF00005	ABC transporter
SH08_RS08285	PF02687	SH08_RS08285
SH08_RS08285	PF12704	MacB-like periplasmic core domain
SH08_RS08290	PF00313	'Cold-shock' DNA-binding domain
SH08_RS08295	PF02617	ATP-dependent Clp protease adaptor protein ClpS
SH08_RS08300	PF00004	ATPase family associated with various cellular activities (AAA)
SH08_RS08300	PF02861	Clp amino terminal domain
SH08_RS08300	PF07724	AAA domain (Cdc48 subfamily)
SH08_RS08300	PF10431	C-terminal, D2-small domain, of ClpB protein
SH08_RS08310	PF01176	Translation initiation factor 1A / IF-1
SH08_RS08315	PF03588	Leucyl/phenylalanyl-tRNA protein transferase
SH08_RS08320	PF00005	ABC transporter
SH08_RS08320	PF00664	ABC transporter transmembrane region
SH08_RS08325	PF00005	ABC transporter
SH08_RS08325	PF00664	ABC transporter transmembrane region
SH08_RS08330	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SH08_RS08335	PF01037	AsnC family
SH08_RS08335	PF13412	Winged helix-turn-helix DNA-binding
SH08_RS08340	PF01580	FtsK/SpoIIIE family
SH08_RS08340	PF09397	Ftsk gamma domain
SH08_RS08340	PF13491	SH08_RS08340
SH08_RS08345	PF03548	Outer membrane lipoprotein carrier protein LolA
SH08_RS08350	PF00004	ATPase family associated with various cellular activities (AAA)
SH08_RS08350	PF12002	MgsA AAA+ ATPase C terminal
SH08_RS08350	PF16193	SH08_RS08350
SH08_RS08355	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
SH08_RS08355	PF02403	Seryl-tRNA synthetase N-terminal domain
SH08_RS08360	PF00384	Molybdopterin oxidoreductase
SH08_RS08360	PF01568	Molydopterin dinucleotide binding domain
SH08_RS08360	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
SH08_RS08365	PF12800	4Fe-4S binding domain
SH08_RS08365	PF13247	4Fe-4S dicluster domain
SH08_RS08370	PF04976	SH08_RS08370
SH08_RS08375	PF00857	Isochorismatase family
SH08_RS08380	PF07690	Major Facilitator Superfamily
SH08_RS08385	PF13520	Amino acid permease
SH08_RS08390	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS08390	PF03466	LysR substrate binding domain
SH08_RS08395	PF02525	Flavodoxin-like fold
SH08_RS08400	PF04055	Radical SAM superfamily
SH08_RS08400	PF13353	4Fe-4S single cluster domain
SH08_RS08405	PF01228	Glycine radical
SH08_RS08405	PF02901	Pyruvate formate lyase
SH08_RS08410	PF01226	Formate/nitrite transporter
SH08_RS08415	PF02624	YcaO-like family
SH08_RS08420	PF04239	Protein of unknown function (DUF421)
SH08_RS08425	PF00266	Aminotransferase class-V
SH08_RS08430	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
SH08_RS08435	PF01435	Peptidase family M48
SH08_RS08440	PF02224	Cytidylate kinase
SH08_RS08445	PF00575	S1 RNA binding domain
SH08_RS08450	PF00216	Bacterial DNA-binding protein
SH08_RS08455	PF00753	Metallo-beta-lactamase superfamily
SH08_RS08455	PF03772	SH08_RS08455
SH08_RS08460	PF00005	ABC transporter
SH08_RS08460	PF00664	ABC transporter transmembrane region
SH08_RS08465	PF02606	Tetraacyldisaccharide-1-P 4'-kinase
SH08_RS08470	PF06224	SH08_RS08470
SH08_RS08475	PF03966	Trm112p-like protein
SH08_RS08480	PF02348	Cytidylyltransferase
SH08_RS08485	PF01636	Phosphotransferase enzyme family
SH08_RS08490	PF02698	DUF218 domain
SH08_RS08495	PF13847	Methyltransferase domain
SH08_RS08500	PF03882	KicB killing factor
SH08_RS08500	PF17192	SH08_RS08500
SH08_RS08500	PF17193	SH08_RS08500
SH08_RS08505	PF04288	MukE-like family
SH08_RS08510	PF04310	MukB N-terminal
SH08_RS08510	PF13558	Putative exonuclease SbcCD, C subunit
SH08_RS08510	PF16330	SH08_RS08510
SH08_RS08515	PF01471	Putative peptidoglycan binding domain
SH08_RS08515	PF03734	L,D-transpeptidase catalytic domain
SH08_RS08520	PF05951	SH08_RS08520
SH08_RS08525	PF00753	Metallo-beta-lactamase superfamily
SH08_RS08530	PF00155	Aminotransferase class I and II
SH08_RS08540	PF00267	Gram-negative porin
SH08_RS08545	PF00152	tRNA synthetases class II (D, K and N)
SH08_RS08545	PF01336	OB-fold nucleic acid binding domain
SH08_RS08550	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
SH08_RS08555	PF01433	Peptidase family M1
SH08_RS08555	PF11940	Domain of unknown function (DUF3458)
SH08_RS08560	PF00005	ABC transporter
SH08_RS08565	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS08570	PF00296	Luciferase-like monooxygenase
SH08_RS08575	PF09084	NMT1/THI5 like
SH08_RS08580	PF03358	NADPH-dependent FMN reductase
SH08_RS08585	PF00419	Fimbrial protein
SH08_RS08590	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
SH08_RS08590	PF02753	Pili assembly chaperone PapD, C-terminal domain
SH08_RS08595	PF00577	Outer membrane usher protein
SH08_RS08595	PF13953	PapC C-terminal domain
SH08_RS08595	PF13954	PapC N-terminal domain
SH08_RS08600	PF00419	Fimbrial protein
SH08_RS08605	PF00419	Fimbrial protein
SH08_RS08610	PF00419	Fimbrial protein
SH08_RS08615	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
SH08_RS08615	PF02753	Pili assembly chaperone PapD, C-terminal domain
SH08_RS08620	PF01180	Dihydroorotate dehydrogenase
SH08_RS08625	PF07126	SH08_RS08625
SH08_RS08630	PF00111	2Fe-2S iron-sulfur cluster binding domain
SH08_RS08630	PF03473	MOSC domain
SH08_RS08630	PF03476	MOSC N-terminal beta barrel domain
SH08_RS08635	PF01170	Putative RNA methylase family UPF0020
SH08_RS08635	PF02926	THUMP domain
SH08_RS08635	PF10672	S-adenosylmethionine-dependent methyltransferase
SH08_RS08640	PF00005	ABC transporter
SH08_RS08640	PF12848	ABC transporter
SH08_RS08640	PF16326	SH08_RS08640
SH08_RS08645	PF04403	SH08_RS08645
SH08_RS08650	PF02470	SH08_RS08650
SH08_RS08655	PF03886	Protein of unknown function (DUF330)
SH08_RS08660	PF04957	Ribosome modulation factor
SH08_RS08665	PF07977	FabA-like domain
SH08_RS08670	PF05362	Lon protease (S16) C-terminal proteolytic domain
SH08_RS08670	PF13654	AAA domain
SH08_RS08675	PF06303	Organiser of macrodomain of Terminus of chromosome
SH08_RS08680	PF00691	OmpA family
SH08_RS08680	PF01389	OmpA-like transmembrane domain
SH08_RS08690	PF03846	Cell division inhibitor SulA
SH08_RS08695	PF04993	TfoX N-terminal domain
SH08_RS08695	PF04994	TfoX C-terminal domain
SH08_RS08700	PF12805	SH08_RS08700
SH08_RS08700	PF13515	SH08_RS08700
SH08_RS08705	PF03733	SH08_RS08705
SH08_RS08710	PF00580	UvrD/REP helicase N-terminal domain
SH08_RS08710	PF12462	SH08_RS08710
SH08_RS08710	PF13361	UvrD-like helicase C-terminal domain
SH08_RS08715	PF02142	MGS-like domain
SH08_RS08720	PF09829	SH08_RS08720
SH08_RS08730	PF13380	CoA binding domain
SH08_RS08735	PF08755	Hemimethylated DNA-binding protein YccV like
SH08_RS08740	PF10672	S-adenosylmethionine-dependent methyltransferase
SH08_RS08745	PF00708	Acylphosphatase
SH08_RS08750	PF04358	DsrC like protein
SH08_RS08755	PF01027	Inhibitor of apoptosis-promoting Bax1
SH08_RS08765	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
SH08_RS08765	PF14720	NiFe/NiFeSe hydrogenase small subunit C-terminal
SH08_RS08770	PF00374	Nickel-dependent hydrogenase
SH08_RS08775	PF01292	Prokaryotic cytochrome b561
SH08_RS08780	PF01750	Hydrogenase maturation protease
SH08_RS08785	PF07449	Hydrogenase-1 expression protein HyaE
SH08_RS08790	PF04809	HupH hydrogenase expression protein, C-terminal conserved region
SH08_RS08795	PF01654	SH08_RS08795
SH08_RS08800	PF02322	SH08_RS08800
SH08_RS08805	PF08173	SH08_RS08805
SH08_RS08810	PF00328	Histidine phosphatase superfamily (branch 2)
SH08_RS08815	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
SH08_RS08815	PF02706	Chain length determinant protein
SH08_RS08815	PF13807	SH08_RS08815
SH08_RS08820	PF01451	Low molecular weight phosphotyrosine protein phosphatase
SH08_RS08825	PF02563	Polysaccharide biosynthesis/export protein
SH08_RS08825	PF10531	SLBB domain
SH08_RS08830	PF06082	SH08_RS08830
SH08_RS08835	PF06251	Capsule biosynthesis GfcC
SH08_RS08840	PF11102	Group 4 capsule polysaccharide formation lipoprotein gfcB
SH08_RS08855	PF03400	SH08_RS08855
SH08_RS08860	PF00313	'Cold-shock' DNA-binding domain
SH08_RS08865	PF00313	'Cold-shock' DNA-binding domain
SH08_RS08870	PF15939	SH08_RS08870
SH08_RS08875	PF08178	SH08_RS08875
SH08_RS08880	PF12801	SH08_RS08880
SH08_RS08885	PF00072	Response regulator receiver domain
SH08_RS08885	PF00512	His Kinase A (phospho-acceptor) domain
SH08_RS08885	PF00672	HAMP domain
SH08_RS08885	PF01627	Hpt domain
SH08_RS08885	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH08_RS08890	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
SH08_RS08895	PF00072	Response regulator receiver domain
SH08_RS08895	PF00486	Transcriptional regulatory protein, C terminal
SH08_RS08900	PF03264	NapC/NirT cytochrome c family, N-terminal region
SH08_RS08905	PF00384	Molybdopterin oxidoreductase
SH08_RS08905	PF01568	Molydopterin dinucleotide binding domain
SH08_RS08910	PF02613	Nitrate reductase delta subunit
SH08_RS08915	PF13591	MerR HTH family regulatory protein
SH08_RS08920	PF00226	DnaJ domain
SH08_RS08920	PF01556	DnaJ C terminal domain
SH08_RS08930	PF00328	Histidine phosphatase superfamily (branch 2)
SH08_RS08935	PF13993	SH08_RS08935
SH08_RS08940	PF03358	NADPH-dependent FMN reductase
SH08_RS08950	PF10685	SH08_RS08950
SH08_RS08955	PF00860	Permease family
SH08_RS08960	PF01613	Flavin reductase like domain
SH08_RS08965	PF00881	Nitroreductase family
SH08_RS08970	PF00561	alpha/beta hydrolase fold
SH08_RS08975	PF01042	Endoribonuclease L-PSP
SH08_RS08980	PF00857	Isochorismatase family
SH08_RS08985	PF00296	Luciferase-like monooxygenase
SH08_RS08990	PF00440	Bacterial regulatory proteins, tetR family
SH08_RS08990	PF08362	YcdC-like protein, C-terminal region
SH08_RS08995	PF00171	Aldehyde dehydrogenase family
SH08_RS08995	PF01619	Proline dehydrogenase
SH08_RS08995	PF14850	DNA-binding domain of Proline dehydrogenase
SH08_RS09005	PF00474	Sodium:solute symporter family
SH08_RS09020	PF09375	Imelysin
SH08_RS09020	PF13473	Cupredoxin-like domain
SH08_RS09025	PF04261	Dyp-type peroxidase family
SH08_RS09035	PF02562	PhoH-like protein
SH08_RS09040	PF13994	SH08_RS09040
SH08_RS09045	PF00535	Glycosyl transferase family 2
SH08_RS09050	PF01522	Polysaccharide deacetylase
SH08_RS09050	PF14883	Hypothetical glycosyl hydrolase family 13
SH08_RS09060	PF00990	GGDEF domain
SH08_RS09060	PF17158	SH08_RS09060
SH08_RS09065	PF00665	Integrase core domain
SH08_RS09065	PF13276	SH08_RS09065
SH08_RS09070	PF01527	Transposase
SH08_RS09100	PF02811	PHP domain
SH08_RS09105	PF02613	Nitrate reductase delta subunit
SH08_RS09110	PF06496	SH08_RS09110
SH08_RS09115	PF03783	Curli production assembly/transport component CsgG
SH08_RS09120	PF10614	SH08_RS09120
SH08_RS09125	PF10627	SH08_RS09125
SH08_RS09130	PF00196	Bacterial regulatory proteins, luxR family
SH08_RS09140	PF07012	SH08_RS09140
SH08_RS09145	PF07012	SH08_RS09145
SH08_RS09150	PF10610	Thin aggregative fimbriae synthesis protein
SH08_RS09160	PF01661	Macro domain
SH08_RS09165	PF13091	PLD-like domain
SH08_RS09170	PF01757	SH08_RS09170
SH08_RS09185	PF04349	Periplasmic glucan biosynthesis protein, MdoG
SH08_RS09190	PF00535	Glycosyl transferase family 2
SH08_RS09195	PF07119	SH08_RS09195
SH08_RS09200	PF13984	SH08_RS09200
SH08_RS09210	PF07690	Major Facilitator Superfamily
SH08_RS09215	PF03279	SH08_RS09215
SH08_RS09220	PF00581	Rhodanese-like domain
SH08_RS09220	PF12368	SH08_RS09220
SH08_RS09225	PF04264	YceI-like domain
SH08_RS09230	PF01292	Prokaryotic cytochrome b561
SH08_RS09235	PF10968	SH08_RS09235
SH08_RS09240	PF01266	FAD dependent oxidoreductase
SH08_RS09245	PF13991	SH08_RS09245
SH08_RS09250	PF06183	DinI-like family
SH08_RS09255	PF01979	Amidohydrolase family
SH08_RS09260	PF07273	Protein of unknown function (DUF1439)
SH08_RS09265	PF04399	Glutaredoxin 2, C terminal domain
SH08_RS09265	PF13417	Glutathione S-transferase, N-terminal domain
SH08_RS09270	PF07690	Major Facilitator Superfamily
SH08_RS09275	PF13302	Acetyltransferase (GNAT) domain
SH08_RS09280	PF04337	Protein of unknown function, DUF480
SH08_RS09285	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
SH08_RS09290	PF03023	SH08_RS09290
SH08_RS09295	PF05130	FlgN protein
SH08_RS09300	PF04316	Anti-sigma-28 factor, FlgM
SH08_RS09305	PF13144	SAF-like
SH08_RS09310	PF00460	Flagella basal body rod protein
SH08_RS09315	PF00460	Flagella basal body rod protein
SH08_RS09315	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
SH08_RS09320	PF03963	SH08_RS09320
SH08_RS09320	PF13860	FlgD Ig-like domain
SH08_RS09320	PF13861	FlgD Tudor-like domain
SH08_RS09325	PF00460	Flagella basal body rod protein
SH08_RS09325	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
SH08_RS09325	PF07559	Flagellar basal body protein FlaE
SH08_RS09330	PF00460	Flagella basal body rod protein
SH08_RS09330	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
SH08_RS09335	PF00460	Flagella basal body rod protein
SH08_RS09335	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
SH08_RS09340	PF02107	SH08_RS09340
SH08_RS09345	PF02119	SH08_RS09345
SH08_RS09350	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
SH08_RS09350	PF10135	SH08_RS09350
SH08_RS09355	PF00460	Flagella basal body rod protein
SH08_RS09355	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
SH08_RS09360	PF00669	Bacterial flagellin N-terminal helical region
SH08_RS09365	PF00575	S1 RNA binding domain
SH08_RS09365	PF10150	Ribonuclease E/G family
SH08_RS09365	PF12111	Polyribonucleotide phosphorylase C terminal
SH08_RS09370	PF10848	SH08_RS09370
SH08_RS09375	PF00849	RNA pseudouridylate synthase
SH08_RS09375	PF01479	S4 domain
SH08_RS09380	PF02545	Maf-like protein
SH08_RS09385	PF02620	SH08_RS09385
SH08_RS09390	PF01783	Ribosomal L32p protein family
SH08_RS09395	PF02504	Fatty acid synthesis protein
SH08_RS09400	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
SH08_RS09400	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
SH08_RS09410	PF13561	Enoyl-(Acyl carrier protein) reductase
SH08_RS09415	PF00550	Phosphopantetheine attachment site
SH08_RS09420	PF00109	Beta-ketoacyl synthase, N-terminal domain
SH08_RS09420	PF02801	Beta-ketoacyl synthase, C-terminal domain
SH08_RS09425	PF01063	Aminotransferase class IV
SH08_RS09430	PF02618	YceG-like family
SH08_RS09435	PF02223	Thymidylate kinase
SH08_RS09440	PF09115	DNA polymerase III, delta subunit, C terminal
SH08_RS09440	PF13177	DNA polymerase III, delta subunit
SH08_RS09445	PF01026	TatD related DNase
SH08_RS09450	PF00367	phosphotransferase system, EIIB
SH08_RS09450	PF02378	Phosphotransferase system, EIIC
SH08_RS09455	PF00593	TonB dependent receptor
SH08_RS09455	PF07715	TonB-dependent Receptor Plug Domain
SH08_RS09460	PF01230	HIT domain
SH08_RS09465	PF07233	Protein of unknown function (DUF1425)
SH08_RS09470	PF13036	Protein of unknown function (DUF3897)
SH08_RS09475	PF01636	Phosphotransferase enzyme family
SH08_RS09480	PF00933	Glycosyl hydrolase family 3 N terminal domain
SH08_RS09485	PF05728	Uncharacterised protein family (UPF0227)
SH08_RS09490	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SH08_RS09495	PF05433	SH08_RS09495
SH08_RS09505	PF07338	Protein of unknown function (DUF1471)
SH08_RS09510	PF01476	LysM domain
SH08_RS09510	PF03734	L,D-transpeptidase catalytic domain
SH08_RS09515	PF00270	DEAD/DEAH box helicase
SH08_RS09515	PF00271	Helicase conserved C-terminal domain
SH08_RS09515	PF02559	CarD-like/TRCF domain
SH08_RS09515	PF03461	TRCF domain
SH08_RS09520	PF01757	SH08_RS09520
SH08_RS09525	PF02687	SH08_RS09525
SH08_RS09525	PF12704	MacB-like periplasmic core domain
SH08_RS09530	PF00005	ABC transporter
SH08_RS09535	PF02687	SH08_RS09535
SH08_RS09535	PF12704	MacB-like periplasmic core domain
SH08_RS09540	PF00480	ROK family
SH08_RS09545	PF02146	Sir2 family
SH08_RS09550	PF04536	TLP18
SH08_RS09555	PF12158	SH08_RS09555
SH08_RS09560	PF13343	Bacterial extracellular solute-binding protein
SH08_RS09565	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS09570	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS09575	PF00005	ABC transporter
SH08_RS09575	PF08402	TOBE domain
SH08_RS09585	PF01546	Peptidase family M20/M25/M40
SH08_RS09585	PF07687	Peptidase dimerisation domain
SH08_RS09590	PF08007	Cupin superfamily protein
SH08_RS09595	PF00672	HAMP domain
SH08_RS09595	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH08_RS09595	PF08918	PhoQ Sensor
SH08_RS09600	PF00072	Response regulator receiver domain
SH08_RS09600	PF00486	Transcriptional regulatory protein, C terminal
SH08_RS09605	PF00206	Lyase
SH08_RS09605	PF08328	Adenylosuccinate lyase C-terminal
SH08_RS09610	PF04356	Protein of unknown function (DUF489)
SH08_RS09615	PF03054	tRNA methyl transferase
SH08_RS09620	PF00293	NUDIX domain
SH08_RS09625	PF00849	RNA pseudouridylate synthase
SH08_RS09630	PF00180	Isocitrate/isopropylmalate dehydrogenase
SH08_RS09635	PF13489	Methyltransferase domain
SH08_RS09645	PF10463	SH08_RS09645
SH08_RS09650	PF00589	Phage integrase family
SH08_RS09650	PF09003	Bacteriophage lambda integrase, N-terminal domain
SH08_RS09660	PF00717	Peptidase S24-like
SH08_RS09665	PF15943	SH08_RS09665
SH08_RS09680	PF03354	SH08_RS09680
SH08_RS09680	PF13730	SH08_RS09680
SH08_RS09690	PF04860	Phage portal protein
SH08_RS09695	PF04865	SH08_RS09695
SH08_RS09700	PF10076	SH08_RS09700
SH08_RS09710	PF02413	SH08_RS09710
SH08_RS09715	PF02413	SH08_RS09715
SH08_RS09725	PF00239	Resolvase, N terminal domain
SH08_RS09725	PF02796	Helix-turn-helix domain of resolvase
SH08_RS09730	PF01844	HNH endonuclease
SH08_RS09745	PF07166	Protein of unknown function (DUF1398)
SH08_RS09750	PF13411	MerR HTH family regulatory protein
SH08_RS09755	PF00563	EAL domain
SH08_RS09755	PF04940	Sensors of blue-light using FAD
SH08_RS09760	PF10798	Biofilm development protein YmgB/AriR
SH08_RS09770	PF10798	Biofilm development protein YmgB/AriR
SH08_RS09780	PF00563	EAL domain
SH08_RS09780	PF12792	SH08_RS09780
SH08_RS09805	PF16456	SH08_RS09805
SH08_RS09810	PF13436	SH08_RS09810
SH08_RS09810	PF13488	SH08_RS09810
SH08_RS09825	PF03776	Septum formation topological specificity factor MinE
SH08_RS09830	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
SH08_RS09835	PF03775	Septum formation inhibitor MinC, C-terminal domain
SH08_RS09835	PF05209	Septum formation inhibitor MinC, N-terminal domain
SH08_RS09840	PF05666	SH08_RS09840
SH08_RS09845	PF04151	Bacterial pre-peptidase C-terminal domain
SH08_RS09855	PF05166	YcgL domain
SH08_RS09860	PF01557	Fumarylacetoacetate (FAA) hydrolase family
SH08_RS09865	PF03692	SH08_RS09865
SH08_RS09870	PF06109	Haemolysin E (HlyE)
SH08_RS09875	PF00717	Peptidase S24-like
SH08_RS09880	PF00817	impB/mucB/samB family
SH08_RS09880	PF11798	IMS family HHH motif
SH08_RS09880	PF11799	impB/mucB/samB family C-terminal domain
SH08_RS09880	PF13438	SH08_RS09880
SH08_RS09885	PF02600	Disulfide bond formation protein DsbB
SH08_RS09890	PF06450	SH08_RS09890
SH08_RS09895	PF00392	Bacterial regulatory proteins, gntR family
SH08_RS09895	PF07840	FadR C-terminal domain
SH08_RS09900	PF04293	SH08_RS09900
SH08_RS09905	PF01266	FAD dependent oxidoreductase
SH08_RS09910	PF00842	Alanine racemase, C-terminal domain
SH08_RS09910	PF01168	Alanine racemase, N-terminal domain
SH08_RS09915	PF00999	Sodium/hydrogen exchanger family
SH08_RS09915	PF02080	TrkA-C domain
SH08_RS09915	PF03471	Transporter associated domain
SH08_RS09920	PF02016	LD-carboxypeptidase
SH08_RS09925	PF01464	Transglycosylase SLT domain
SH08_RS09930	PF07238	PilZ domain
SH08_RS09930	PF07317	Flagellar regulator YcgR
SH08_RS09935	PF04226	SH08_RS09935
SH08_RS09945	PF01204	Trehalase
SH08_RS09950	PF00381	PTS HPr component phosphorylation site
SH08_RS09950	PF00391	PEP-utilising enzyme, mobile domain
SH08_RS09950	PF03610	PTS system fructose IIA component
SH08_RS09950	PF05524	PEP-utilising enzyme, N-terminal
SH08_RS09955	PF02734	DAK2 domain
SH08_RS09960	PF02733	Dak1 domain
SH08_RS09965	PF00158	Sigma-54 interaction domain
SH08_RS09965	PF00989	PAS fold
SH08_RS09965	PF02954	Bacterial regulatory protein, Fis family
SH08_RS09970	PF03212	Pertactin
SH08_RS09970	PF03797	Autotransporter beta-domain
SH08_RS09980	PF01926	50S ribosome-binding GTPase
SH08_RS09980	PF06071	Protein of unknown function (DUF933)
SH08_RS09985	PF01195	Peptidyl-tRNA hydrolase
SH08_RS09990	PF10762	SH08_RS09990
SH08_RS09995	PF00916	SH08_RS09995
SH08_RS09995	PF01740	STAS domain
SH08_RS10000	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
SH08_RS10000	PF14572	Phosphoribosyl synthetase-associated domain
SH08_RS10005	PF00288	GHMP kinases N terminal domain
SH08_RS10005	PF08544	GHMP kinases C terminal
SH08_RS10010	PF03550	Outer membrane lipoprotein LolB
SH08_RS10015	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
SH08_RS10015	PF01488	Shikimate / quinate 5-dehydrogenase
SH08_RS10015	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
SH08_RS10020	PF00472	RF-1 domain
SH08_RS10020	PF03462	PCRF domain
SH08_RS10025	PF13847	Methyltransferase domain
SH08_RS10030	PF04247	SH08_RS10030
SH08_RS10035	PF13369	SH08_RS10035
SH08_RS10035	PF13371	Tetratricopeptide repeat
SH08_RS10040	PF00793	DAHP synthetase I family
SH08_RS10045	PF13940	SH08_RS10045
SH08_RS10050	PF13940	SH08_RS10050
SH08_RS10055	PF01699	Sodium/calcium exchanger protein
SH08_RS10060	PF06150	ChaB
SH08_RS10065	PF04752	SH08_RS10065
SH08_RS10070	PF02635	DsrE/DsrF-like family
SH08_RS10075	PF11924	Protein of unknown function (DUF3442)
SH08_RS10080	PF00072	Response regulator receiver domain
SH08_RS10080	PF00196	Bacterial regulatory proteins, luxR family
SH08_RS10085	PF00672	HAMP domain
SH08_RS10085	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH08_RS10085	PF07730	Histidine kinase
SH08_RS10085	PF13675	Type IV pili methyl-accepting chemotaxis transducer N-term
SH08_RS10095	PF07690	Major Facilitator Superfamily
SH08_RS10100	PF00384	Molybdopterin oxidoreductase
SH08_RS10100	PF01568	Molydopterin dinucleotide binding domain
SH08_RS10100	PF14710	Respiratory nitrate reductase alpha N-terminal
SH08_RS10105	PF13247	4Fe-4S dicluster domain
SH08_RS10105	PF14711	Respiratory nitrate reductase beta C-terminal
SH08_RS10110	PF02613	Nitrate reductase delta subunit
SH08_RS10115	PF02665	Nitrate reductase gamma subunit
SH08_RS10135	PF00551	Formyl transferase
SH08_RS10135	PF01842	ACT domain
SH08_RS10140	PF02810	SEC-C motif
SH08_RS10145	PF01734	Patatin-like phospholipase
SH08_RS10155	PF00483	Nucleotidyl transferase
SH08_RS10160	PF00816	H-NS histone family
SH08_RS10165	PF00265	Thymidine kinase
SH08_RS10170	PF01609	Transposase DDE domain
SH08_RS10180	PF00171	Aldehyde dehydrogenase family
SH08_RS10180	PF00465	Iron-containing alcohol dehydrogenase
SH08_RS10185	PF01914	SH08_RS10185
SH08_RS10190	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
SH08_RS10195	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS10200	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS10200	PF12911	SH08_RS10200
SH08_RS10205	PF00005	ABC transporter
SH08_RS10205	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
SH08_RS10210	PF00005	ABC transporter
SH08_RS10210	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
SH08_RS10215	PF04269	Protein of unknown function, DUF440
SH08_RS10220	PF13091	PLD-like domain
SH08_RS10220	PF13396	SH08_RS10220
SH08_RS10230	PF02254	TrkA-N domain
SH08_RS10230	PF07885	Ion channel
SH08_RS10235	PF03795	YCII-related domain
SH08_RS10240	PF03544	Gram-negative bacterial TonB protein C-terminal
SH08_RS10240	PF16031	SH08_RS10240
SH08_RS10245	PF03061	Thioesterase superfamily
SH08_RS10250	PF04279	SH08_RS10250
SH08_RS10255	PF06790	SH08_RS10255
SH08_RS10260	PF03922	OmpW family
SH08_RS10265	PF05974	Domain of unknown function (DUF892)
SH08_RS10270	PF05974	Domain of unknown function (DUF892)
SH08_RS10275	PF10685	SH08_RS10275
SH08_RS10280	PF00290	Tryptophan synthase alpha chain
SH08_RS10285	PF00291	Pyridoxal-phosphate dependent enzyme
SH08_RS10290	PF00218	Indole-3-glycerol phosphate synthase
SH08_RS10290	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
SH08_RS10295	PF00117	Glutamine amidotransferase class-I
SH08_RS10295	PF00591	Glycosyl transferase family, a/b domain
SH08_RS10295	PF02885	Glycosyl transferase family, helical bundle domain
SH08_RS10300	PF00425	chorismate binding enzyme
SH08_RS10300	PF04715	Anthranilate synthase component I, N terminal region
SH08_RS10305	PF02811	PHP domain
SH08_RS10310	PF01300	Telomere recombination
SH08_RS10315	PF09972	SH08_RS10315
SH08_RS10320	PF00849	RNA pseudouridylate synthase
SH08_RS10320	PF01479	S4 domain
SH08_RS10325	PF02572	ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
SH08_RS10325	PF12557	Cob(I)alamin adenosyltransferase N terminal
SH08_RS10330	PF00106	short chain dehydrogenase
SH08_RS10340	PF01343	Peptidase family S49
SH08_RS10340	PF08496	SH08_RS10340
SH08_RS10345	PF10692	Protein of unknown function (DUF2498)
SH08_RS10355	PF01131	DNA topoisomerase
SH08_RS10355	PF01396	SH08_RS10355
SH08_RS10355	PF01751	Toprim domain
SH08_RS10355	PF08272	Topoisomerase I zinc-ribbon-like
SH08_RS10360	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS10360	PF03466	LysR substrate binding domain
SH08_RS10380	PF00330	Aconitase family (aconitate hydratase)
SH08_RS10380	PF00694	Aconitase C-terminal domain
SH08_RS10385	PF00925	GTP cyclohydrolase II
SH08_RS10390	PF01569	PAP2 superfamily
SH08_RS10395	PF06305	SH08_RS10395
SH08_RS10400	PF14559	Tetratricopeptide repeat
SH08_RS10405	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
SH08_RS10410	PF01253	Translation initiation factor SUI1
SH08_RS10415	PF05433	SH08_RS10415
SH08_RS10420	PF00455	SH08_RS10420
SH08_RS10420	PF08220	DeoR-like helix-turn-helix domain
SH08_RS10430	PF00563	EAL domain
SH08_RS10430	PF00990	GGDEF domain
SH08_RS10430	PF13426	PAS domain
SH08_RS10440	PF00575	S1 RNA binding domain
SH08_RS10440	PF00773	RNB domain
SH08_RS10440	PF08206	Ribonuclease B OB domain
SH08_RS10450	PF13561	Enoyl-(Acyl carrier protein) reductase
SH08_RS10455	PF04480	Protein of unknown function (DUF559)
SH08_RS10460	PF00005	ABC transporter
SH08_RS10465	PF00005	ABC transporter
SH08_RS10465	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
SH08_RS10470	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS10470	PF12911	SH08_RS10470
SH08_RS10475	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS10480	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
SH08_RS10490	PF10820	SH08_RS10490
SH08_RS10495	PF00324	Amino acid permease
SH08_RS10500	PF00120	Glutamine synthetase, catalytic domain
SH08_RS10505	PF07722	Peptidase C26
SH08_RS10510	PF01381	Helix-turn-helix
SH08_RS10510	PF07883	Cupin domain
SH08_RS10515	PF00171	Aldehyde dehydrogenase family
SH08_RS10520	PF01266	FAD dependent oxidoreductase
SH08_RS10525	PF00202	Aminotransferase class-III
SH08_RS10530	PF00158	Sigma-54 interaction domain
SH08_RS10530	PF02954	Bacterial regulatory protein, Fis family
SH08_RS10535	PF04012	SH08_RS10535
SH08_RS10540	PF06667	SH08_RS10540
SH08_RS10545	PF04024	SH08_RS10545
SH08_RS10550	PF09584	SH08_RS10550
SH08_RS10555	PF00581	Rhodanese-like domain
SH08_RS10560	PF00128	Alpha amylase, catalytic domain
SH08_RS10565	PF01547	Bacterial extracellular solute-binding protein
SH08_RS10570	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS10575	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS10580	PF00107	Zinc-binding dehydrogenase
SH08_RS10585	PF01261	Xylose isomerase-like TIM barrel
SH08_RS10590	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
SH08_RS10590	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
SH08_RS10595	PF03632	Glycosyl hydrolase family 65 central catalytic domain
SH08_RS10595	PF03633	Glycosyl hydrolase family 65, C-terminal domain
SH08_RS10595	PF03636	Glycosyl hydrolase family 65, N-terminal domain
SH08_RS10600	PF13419	Haloacid dehalogenase-like hydrolase
SH08_RS10610	PF09381	Outer membrane protein G (OmpG)
SH08_RS10615	PF00356	Bacterial regulatory proteins, lacI family
SH08_RS10615	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
SH08_RS10620	PF04317	SH08_RS10620
SH08_RS10625	PF05128	SH08_RS10625
SH08_RS10630	PF00158	Sigma-54 interaction domain
SH08_RS10630	PF13188	PAS domain
SH08_RS10635	PF08534	Redoxin
SH08_RS10640	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
SH08_RS10640	PF13378	Enolase C-terminal domain-like
SH08_RS10645	PF00246	Zinc carboxypeptidase
SH08_RS10655	PF12146	Putative lysophospholipase
SH08_RS10660	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS10660	PF03466	LysR substrate binding domain
SH08_RS10670	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
SH08_RS10675	PF00924	Mechanosensitive ion channel
SH08_RS10680	PF01609	Transposase DDE domain
SH08_RS10680	PF05598	SH08_RS10680
SH08_RS10685	PF10749	SH08_RS10685
SH08_RS10690	PF00582	Universal stress protein family
SH08_RS10695	PF00027	Cyclic nucleotide-binding domain
SH08_RS10695	PF13545	Crp-like helix-turn-helix domain
SH08_RS10700	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
SH08_RS10700	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
SH08_RS10705	PF03806	SH08_RS10705
SH08_RS10715	PF01546	Peptidase family M20/M25/M40
SH08_RS10720	PF01546	Peptidase family M20/M25/M40
SH08_RS10720	PF07687	Peptidase dimerisation domain
SH08_RS10725	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS10725	PF03466	LysR substrate binding domain
SH08_RS10735	PF01713	Smr domain
SH08_RS10740	PF00990	GGDEF domain
SH08_RS10740	PF08448	PAS fold
SH08_RS10745	PF01544	CorA-like Mg2+ transporter protein
SH08_RS10755	PF00270	DEAD/DEAH box helicase
SH08_RS10755	PF00271	Helicase conserved C-terminal domain
SH08_RS10755	PF03880	DbpA RNA binding domain
SH08_RS10760	PF01171	PP-loop family
SH08_RS10770	PF06806	Putative excisionase (DUF1233)
SH08_RS10775	PF06688	SH08_RS10775
SH08_RS10780	PF14354	SH08_RS10780
SH08_RS10785	PF03837	SH08_RS10785
SH08_RS10790	PF06630	SH08_RS10790
SH08_RS10790	PF12684	PDDEXK-like domain of unknown function (DUF3799)
SH08_RS10800	PF04181	Rtr1/RPAP2 family
SH08_RS10810	PF14163	SH08_RS10810
SH08_RS10820	PF15943	SH08_RS10820
SH08_RS10825	PF06254	Protein of unknown function (DUF1019)
SH08_RS10830	PF07120	SH08_RS10830
SH08_RS10835	PF01695	IstB-like ATP binding protein
SH08_RS10840	PF07789	SH08_RS10840
SH08_RS10845	PF03245	SH08_RS10845
SH08_RS10850	PF02386	Cation transport protein
SH08_RS10855	PF02195	ParB-like nuclease domain
SH08_RS10870	PF06791	SH08_RS10870
SH08_RS10875	PF06316	Enterobacterial Ail/Lom protein
SH08_RS10880	PF01609	Transposase DDE domain
SH08_RS10880	PF05598	SH08_RS10880
SH08_RS10885	PF06316	Enterobacterial Ail/Lom protein
SH08_RS10900	PF03335	Phage tail fibre repeat
SH08_RS10900	PF03406	SH08_RS10900
SH08_RS10900	PF07484	Phage Tail Collar Domain
SH08_RS10905	PF02413	SH08_RS10905
SH08_RS10910	PF00239	Resolvase, N terminal domain
SH08_RS10910	PF02796	Helix-turn-helix domain of resolvase
SH08_RS10920	PF00582	Universal stress protein family
SH08_RS10925	PF00267	Gram-negative porin
SH08_RS10930	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
SH08_RS10930	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
SH08_RS10930	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
SH08_RS10930	PF10371	Domain of unknown function
SH08_RS10930	PF13484	SH08_RS10930
SH08_RS10930	PF17147	SH08_RS10930
SH08_RS10935	PF03891	SH08_RS10935
SH08_RS10940	PF03724	META domain
SH08_RS10945	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
SH08_RS10945	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
SH08_RS10950	PF11739	SH08_RS10950
SH08_RS10955	PF13617	SH08_RS10955
SH08_RS10960	PF07027	SH08_RS10960
SH08_RS10965	PF12833	Helix-turn-helix domain
SH08_RS10965	PF14525	SH08_RS10965
SH08_RS10970	PF00171	Aldehyde dehydrogenase family
SH08_RS10975	PF01179	Copper amine oxidase, enzyme domain
SH08_RS10975	PF02727	Copper amine oxidase, N2 domain
SH08_RS10975	PF02728	Copper amine oxidase, N3 domain
SH08_RS10975	PF07833	Copper amine oxidase N-terminal domain
SH08_RS10980	PF00171	Aldehyde dehydrogenase family
SH08_RS10980	PF01575	MaoC like domain
SH08_RS10985	PF05138	Phenylacetic acid catabolic protein
SH08_RS10990	PF06243	Phenylacetic acid degradation B
SH08_RS10995	PF05138	Phenylacetic acid catabolic protein
SH08_RS11000	PF01883	Domain of unknown function DUF59
SH08_RS11005	PF00111	2Fe-2S iron-sulfur cluster binding domain
SH08_RS11005	PF00175	Oxidoreductase NAD-binding domain
SH08_RS11005	PF00970	Oxidoreductase FAD-binding domain
SH08_RS11010	PF00378	Enoyl-CoA hydratase/isomerase family
SH08_RS11015	PF00378	Enoyl-CoA hydratase/isomerase family
SH08_RS11020	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
SH08_RS11020	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
SH08_RS11025	PF03061	Thioesterase superfamily
SH08_RS11030	PF00108	Thiolase, N-terminal domain
SH08_RS11030	PF02803	Thiolase, C-terminal domain
SH08_RS11035	PF00501	AMP-binding enzyme
SH08_RS11035	PF14535	AMP-binding enzyme C-terminal domain
SH08_RS11040	PF07848	PaaX-like protein
SH08_RS11040	PF08223	PaaX-like protein C-terminal domain
SH08_RS11045	PF00132	Bacterial transferase hexapeptide (six repeats)
SH08_RS11055	PF00665	Integrase core domain
SH08_RS11055	PF13276	SH08_RS11055
SH08_RS11060	PF01527	Transposase
SH08_RS11065	PF00665	Integrase core domain
SH08_RS11065	PF13936	Helix-turn-helix domain
SH08_RS11070	PF03797	Autotransporter beta-domain
SH08_RS11075	PF00248	Aldo/keto reductase family
SH08_RS11080	PF10971	SH08_RS11080
SH08_RS11085	PF01066	CDP-alcohol phosphatidyltransferase
SH08_RS11090	PF01148	Cytidylyltransferase family
SH08_RS11095	PF12146	Putative lysophospholipase
SH08_RS11095	PF12147	SH08_RS11095
SH08_RS11100	PF00782	Dual specificity phosphatase, catalytic domain
SH08_RS11105	PF02525	Flavodoxin-like fold
SH08_RS11110	PF00270	DEAD/DEAH box helicase
SH08_RS11110	PF00271	Helicase conserved C-terminal domain
SH08_RS11110	PF04408	Helicase associated domain (HA2)
SH08_RS11110	PF07717	Oligonucleotide/oligosaccharide-binding (OB)-fold
SH08_RS11110	PF11898	SH08_RS11110
SH08_RS11115	PF02698	DUF218 domain
SH08_RS11120	PF00171	Aldehyde dehydrogenase family
SH08_RS11125	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
SH08_RS11130	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
SH08_RS11135	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SH08_RS11140	PF01292	Prokaryotic cytochrome b561
SH08_RS11150	PF01848	SH08_RS11150
SH08_RS11155	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SH08_RS11155	PF00672	HAMP domain
SH08_RS11155	PF02203	Tar ligand binding domain homologue
SH08_RS11160	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS11160	PF03466	LysR substrate binding domain
SH08_RS11165	PF07063	Domain of unknown function (DUF1338)
SH08_RS11170	PF04349	Periplasmic glucan biosynthesis protein, MdoG
SH08_RS11180	PF04325	Protein of unknown function (DUF465)
SH08_RS11185	PF13302	Acetyltransferase (GNAT) domain
SH08_RS11195	PF03595	Voltage-dependent anion channel
SH08_RS11200	PF03848	Tellurite resistance protein TehB
SH08_RS11205	PF11769	SH08_RS11205
SH08_RS11215	PF01797	Transposase IS200 like
SH08_RS11220	PF01385	SH08_RS11220
SH08_RS11220	PF07282	SH08_RS11220
SH08_RS11220	PF12323	SH08_RS11220
SH08_RS11225	PF03594	SH08_RS11225
SH08_RS11230	PF01381	Helix-turn-helix
SH08_RS11230	PF07883	Cupin domain
SH08_RS11235	PF01136	SH08_RS11235
SH08_RS11235	PF12392	SH08_RS11235
SH08_RS11240	PF10829	SH08_RS11240
SH08_RS11245	PF07927	YcfA-like protein
SH08_RS11250	PF01381	Helix-turn-helix
SH08_RS11250	PF15919	SH08_RS11250
SH08_RS11255	PF00155	Aminotransferase class I and II
SH08_RS11255	PF00392	Bacterial regulatory proteins, gntR family
SH08_RS11260	PF13416	Bacterial extracellular solute-binding protein
SH08_RS11265	PF00005	ABC transporter
SH08_RS11265	PF08402	TOBE domain
SH08_RS11270	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS11275	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS11280	PF00171	Aldehyde dehydrogenase family
SH08_RS11290	PF10753	SH08_RS11290
SH08_RS11295	PF10735	SH08_RS11295
SH08_RS11300	PF04657	SH08_RS11300
SH08_RS11305	PF13420	Acetyltransferase (GNAT) domain
SH08_RS11310	PF00107	Zinc-binding dehydrogenase
SH08_RS11310	PF16884	SH08_RS11310
SH08_RS11315	PF00392	Bacterial regulatory proteins, gntR family
SH08_RS11315	PF07729	FCD domain
SH08_RS11320	PF00593	TonB dependent receptor
SH08_RS11320	PF07715	TonB-dependent Receptor Plug Domain
SH08_RS11330	PF00324	Amino acid permease
SH08_RS11335	PF13417	Glutathione S-transferase, N-terminal domain
SH08_RS11345	PF03527	SH08_RS11345
SH08_RS11355	PF01609	Transposase DDE domain
SH08_RS11355	PF13808	SH08_RS11355
SH08_RS11360	PF01609	Transposase DDE domain
SH08_RS11360	PF13808	SH08_RS11360
SH08_RS11365	PF01361	Tautomerase enzyme
SH08_RS11370	PF01613	Flavin reductase like domain
SH08_RS11375	PF00797	N-acetyltransferase
SH08_RS11380	PF02567	Phenazine biosynthesis-like protein
SH08_RS11385	PF02665	Nitrate reductase gamma subunit
SH08_RS11390	PF02613	Nitrate reductase delta subunit
SH08_RS11395	PF13247	4Fe-4S dicluster domain
SH08_RS11395	PF14711	Respiratory nitrate reductase beta C-terminal
SH08_RS11400	PF00384	Molybdopterin oxidoreductase
SH08_RS11400	PF01568	Molydopterin dinucleotide binding domain
SH08_RS11400	PF14710	Respiratory nitrate reductase alpha N-terminal
SH08_RS11405	PF07690	Major Facilitator Superfamily
SH08_RS11415	PF00267	Gram-negative porin
SH08_RS11420	PF00892	EamA-like transporter family
SH08_RS11425	PF00384	Molybdopterin oxidoreductase
SH08_RS11425	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
SH08_RS11430	PF00384	Molybdopterin oxidoreductase
SH08_RS11430	PF01568	Molydopterin dinucleotide binding domain
SH08_RS11435	PF09163	Formate dehydrogenase N, transmembrane
SH08_RS11435	PF12800	4Fe-4S binding domain
SH08_RS11435	PF13247	4Fe-4S dicluster domain
SH08_RS11440	PF01292	Prokaryotic cytochrome b561
SH08_RS11445	PF01381	Helix-turn-helix
SH08_RS11450	PF00107	Zinc-binding dehydrogenase
SH08_RS11450	PF08240	Alcohol dehydrogenase GroES-like domain
SH08_RS11455	PF00390	Malic enzyme, N-terminal domain
SH08_RS11455	PF03949	Malic enzyme, NAD binding domain
SH08_RS11460	PF08136	SH08_RS11460
SH08_RS11465	PF10684	SH08_RS11465
SH08_RS11470	PF02566	OsmC-like protein
SH08_RS11475	PF00005	ABC transporter
SH08_RS11475	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
SH08_RS11480	PF00005	ABC transporter
SH08_RS11480	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
SH08_RS11485	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS11485	PF12911	SH08_RS11485
SH08_RS11490	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS11495	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
SH08_RS11500	PF01427	D-ala-D-ala dipeptidase
SH08_RS11510	PF00990	GGDEF domain
SH08_RS11510	PF11563	Protoglobin
SH08_RS11515	PF02638	SH08_RS11515
SH08_RS11520	PF13520	Amino acid permease
SH08_RS11525	PF00282	Pyridoxal-dependent decarboxylase conserved domain
SH08_RS11535	PF00675	Insulinase (Peptidase family M16)
SH08_RS11535	PF05193	Peptidase M16 inactive domain
SH08_RS11540	PF07715	TonB-dependent Receptor Plug Domain
SH08_RS11545	PF00005	ABC transporter
SH08_RS11545	PF06472	SH08_RS11545
SH08_RS11550	PF04055	Radical SAM superfamily
SH08_RS11550	PF13186	Iron-sulfur cluster-binding domain
SH08_RS11550	PF13353	4Fe-4S single cluster domain
SH08_RS11555	PF00884	Sulfatase
SH08_RS11560	PF12833	Helix-turn-helix domain
SH08_RS11565	PF17073	SH08_RS11565
SH08_RS11570	PF00384	Molybdopterin oxidoreductase
SH08_RS11570	PF01568	Molydopterin dinucleotide binding domain
SH08_RS11575	PF09160	FimH, mannose binding
SH08_RS11585	PF00419	Fimbrial protein
SH08_RS11590	PF00577	Outer membrane usher protein
SH08_RS11590	PF13953	PapC C-terminal domain
SH08_RS11600	PF07804	HipA-like C-terminal domain
SH08_RS11600	PF07805	HipA-like N-terminal domain
SH08_RS11600	PF13657	HipA N-terminal domain
SH08_RS11610	PF03212	Pertactin
SH08_RS11610	PF03797	Autotransporter beta-domain
SH08_RS11615	PF13018	SH08_RS11615
SH08_RS11620	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
SH08_RS11620	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
SH08_RS11625	PF04198	Putative sugar-binding domain
SH08_RS11635	PF02653	SH08_RS11635
SH08_RS11640	PF02653	SH08_RS11640
SH08_RS11645	PF13407	Periplasmic binding protein domain
SH08_RS11650	PF01791	DeoC/LacD family aldolase
SH08_RS11655	PF03992	Antibiotic biosynthesis monooxygenase
SH08_RS11660	PF13489	Methyltransferase domain
SH08_RS11665	PF01062	SH08_RS11665
SH08_RS11675	PF01232	Mannitol dehydrogenase Rossmann domain
SH08_RS11675	PF08125	Mannitol dehydrogenase C-terminal domain
SH08_RS11680	PF00990	GGDEF domain
SH08_RS11685	PF13811	SH08_RS11685
SH08_RS11690	PF04960	Glutaminase
SH08_RS11695	PF00171	Aldehyde dehydrogenase family
SH08_RS11700	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS11700	PF03466	LysR substrate binding domain
SH08_RS11710	PF07690	Major Facilitator Superfamily
SH08_RS11715	PF01914	SH08_RS11715
SH08_RS11720	PF01047	MarR family
SH08_RS11730	PF13999	SH08_RS11730
SH08_RS11735	PF00892	EamA-like transporter family
SH08_RS11740	PF07690	Major Facilitator Superfamily
SH08_RS11750	PF00990	GGDEF domain
SH08_RS11750	PF13682	Chemoreceptor zinc-binding domain
SH08_RS11755	PF04076	Bacterial OB fold (BOF) protein
SH08_RS11760	PF02464	Competence-damaged protein
SH08_RS11770	PF00106	short chain dehydrogenase
SH08_RS11775	PF00392	Bacterial regulatory proteins, gntR family
SH08_RS11775	PF07729	FCD domain
SH08_RS11780	PF14001	SH08_RS11780
SH08_RS11785	PF01232	Mannitol dehydrogenase Rossmann domain
SH08_RS11785	PF08125	Mannitol dehydrogenase C-terminal domain
SH08_RS11790	PF00083	Sugar (and other) transporter
SH08_RS11790	PF07690	Major Facilitator Superfamily
SH08_RS11800	PF00239	Resolvase, N terminal domain
SH08_RS11800	PF02796	Helix-turn-helix domain of resolvase
SH08_RS11805	PF02413	SH08_RS11805
SH08_RS11810	PF03335	Phage tail fibre repeat
SH08_RS11810	PF07484	Phage Tail Collar Domain
SH08_RS11815	PF07471	Phage DNA packaging protein Nu1
SH08_RS11820	PF13132	SH08_RS11820
SH08_RS11825	PF07166	Protein of unknown function (DUF1398)
SH08_RS11830	PF08178	SH08_RS11830
SH08_RS11840	PF00313	'Cold-shock' DNA-binding domain
SH08_RS11845	PF10721	SH08_RS11845
SH08_RS11850	PF00959	Phage lysozyme
SH08_RS11855	PF07041	SH08_RS11855
SH08_RS11860	PF04971	SH08_RS11860
SH08_RS11865	PF00313	'Cold-shock' DNA-binding domain
SH08_RS11870	PF00313	'Cold-shock' DNA-binding domain
SH08_RS11875	PF03589	Antitermination protein
SH08_RS11880	PF06147	SH08_RS11880
SH08_RS11895	PF01848	SH08_RS11895
SH08_RS11900	PF05016	Plasmid stabilisation system protein
SH08_RS11905	PF04221	RelB antitoxin
SH08_RS11910	PF14282	SH08_RS11910
SH08_RS11920	PF14549	DNA-binding transcriptional regulator Cro
SH08_RS11925	PF01381	Helix-turn-helix
SH08_RS11930	PF07151	SH08_RS11930
SH08_RS11945	PF05358	SH08_RS11945
SH08_RS11950	PF07358	SH08_RS11950
SH08_RS11965	PF00589	Phage integrase family
SH08_RS11965	PF12167	SH08_RS11965
SH08_RS11970	PF00107	Zinc-binding dehydrogenase
SH08_RS11970	PF08240	Alcohol dehydrogenase GroES-like domain
SH08_RS11975	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
SH08_RS11975	PF13378	Enolase C-terminal domain-like
SH08_RS11980	PF02694	SH08_RS11980
SH08_RS11985	PF06932	SH08_RS11985
SH08_RS11990	PF13302	Acetyltransferase (GNAT) domain
SH08_RS11995	PF06788	SH08_RS11995
SH08_RS12000	PF06649	SH08_RS12000
SH08_RS12005	PF00384	Molybdopterin oxidoreductase
SH08_RS12005	PF01568	Molydopterin dinucleotide binding domain
SH08_RS12005	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
SH08_RS12010	PF00384	Molybdopterin oxidoreductase
SH08_RS12010	PF01568	Molydopterin dinucleotide binding domain
SH08_RS12010	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
SH08_RS12015	PF12800	4Fe-4S binding domain
SH08_RS12015	PF13247	4Fe-4S dicluster domain
SH08_RS12020	PF04976	SH08_RS12020
SH08_RS12025	PF02613	Nitrate reductase delta subunit
SH08_RS12030	PF00654	Voltage gated chloride channel
SH08_RS12035	PF13500	AAA domain
SH08_RS12040	PF00480	ROK family
SH08_RS12045	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS12045	PF03466	LysR substrate binding domain
SH08_RS12050	PF07690	Major Facilitator Superfamily
SH08_RS12065	PF00089	Trypsin
SH08_RS12070	PF00893	Small Multidrug Resistance protein
SH08_RS12075	PF00893	Small Multidrug Resistance protein
SH08_RS12080	PF01594	SH08_RS12080
SH08_RS12085	PF02233	NAD(P) transhydrogenase beta subunit
SH08_RS12090	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
SH08_RS12090	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
SH08_RS12090	PF12769	Domain of unknown function (DUF3814)
SH08_RS12095	PF07338	Protein of unknown function (DUF1471)
SH08_RS12100	PF13520	Amino acid permease
SH08_RS12105	PF13561	Enoyl-(Acyl carrier protein) reductase
SH08_RS12110	PF06942	SH08_RS12110
SH08_RS12115	PF00072	Response regulator receiver domain
SH08_RS12115	PF00486	Transcriptional regulatory protein, C terminal
SH08_RS12120	PF00512	His Kinase A (phospho-acceptor) domain
SH08_RS12120	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH08_RS12125	PF05472	DNA replication terminus site-binding protein (Ter protein)
SH08_RS12130	PF00206	Lyase
SH08_RS12130	PF10415	Fumarase C C-terminus
SH08_RS12135	PF05681	SH08_RS12135
SH08_RS12135	PF05683	Fumarase C-terminus
SH08_RS12140	PF01238	Phosphomannose isomerase type I
SH08_RS12145	PF06097	SH08_RS12145
SH08_RS12150	PF03573	outer membrane porin, OprD family
SH08_RS12155	PF13347	MFS/sugar transport protein
SH08_RS12160	PF00703	Glycosyl hydrolases family 2
SH08_RS12160	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
SH08_RS12160	PF02837	Glycosyl hydrolases family 2, sugar binding domain
SH08_RS12165	PF00440	Bacterial regulatory proteins, tetR family
SH08_RS12170	PF13561	Enoyl-(Acyl carrier protein) reductase
SH08_RS12175	PF00356	Bacterial regulatory proteins, lacI family
SH08_RS12175	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
SH08_RS12180	PF00367	phosphotransferase system, EIIB
SH08_RS12180	PF02378	Phosphotransferase system, EIIC
SH08_RS12185	PF00155	Aminotransferase class I and II
SH08_RS12190	PF00962	Adenosine/AMP deaminase
SH08_RS12195	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
SH08_RS12195	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
SH08_RS12205	PF05321	Haemolysin expression modulating protein
SH08_RS12210	PF10754	SH08_RS12210
SH08_RS12215	PF02508	SH08_RS12215
SH08_RS12220	PF04060	Putative Fe-S cluster
SH08_RS12220	PF14697	4Fe-4S dicluster domain
SH08_RS12225	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
SH08_RS12225	PF10531	SLBB domain
SH08_RS12225	PF12838	4Fe-4S dicluster domain
SH08_RS12225	PF13375	RnfC Barrel sandwich hybrid domain
SH08_RS12230	PF03116	SH08_RS12230
SH08_RS12235	PF04205	FMN-binding domain
SH08_RS12240	PF02508	SH08_RS12240
SH08_RS12245	PF00633	Helix-hairpin-helix motif
SH08_RS12245	PF00730	HhH-GPD superfamily base excision DNA repair protein
SH08_RS12245	PF10576	Iron-sulfur binding domain of endonuclease III
SH08_RS12255	PF00854	POT family
SH08_RS12260	PF00043	Glutathione S-transferase, C-terminal domain
SH08_RS12260	PF13409	Glutathione S-transferase, N-terminal domain
SH08_RS12265	PF08543	Phosphomethylpyrimidine kinase
SH08_RS12270	PF00579	tRNA synthetases class I (W and Y)
SH08_RS12270	PF01479	S4 domain
SH08_RS12275	PF01243	Pyridoxamine 5'-phosphate oxidase
SH08_RS12275	PF10590	Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
SH08_RS12280	PF09864	Membrane-bound lysozyme-inhibitor of c-type lysozyme
SH08_RS12285	PF03702	Uncharacterised protein family (UPF0075)
SH08_RS12290	PF05433	SH08_RS12290
SH08_RS12295	PF01047	MarR family
SH08_RS12300	PF07869	SH08_RS12300
SH08_RS12305	PF00529	HlyD family secretion protein
SH08_RS12305	PF16576	SH08_RS12305
SH08_RS12310	PF04632	SH08_RS12310
SH08_RS12315	PF00080	Copper/zinc superoxide dismutase (SODC)
SH08_RS12320	PF00248	Aldo/keto reductase family
SH08_RS12325	PF06945	SH08_RS12325
SH08_RS12330	PF00440	Bacterial regulatory proteins, tetR family
SH08_RS12330	PF16925	SH08_RS12330
SH08_RS12335	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
SH08_RS12340	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
SH08_RS12345	PF00929	Exonuclease
SH08_RS12350	PF00270	DEAD/DEAH box helicase
SH08_RS12350	PF00271	Helicase conserved C-terminal domain
SH08_RS12350	PF08494	SH08_RS12350
SH08_RS12355	PF00462	Glutaredoxin
SH08_RS12360	PF00877	NlpC/P60 family
SH08_RS12365	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
SH08_RS12365	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
SH08_RS12370	PF07690	Major Facilitator Superfamily
SH08_RS12380	PF00356	Bacterial regulatory proteins, lacI family
SH08_RS12380	PF13377	Periplasmic binding protein-like domain
SH08_RS12385	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS12385	PF03466	LysR substrate binding domain
SH08_RS12390	PF07690	Major Facilitator Superfamily
SH08_RS12395	PF02353	Mycolic acid cyclopropane synthetase
SH08_RS12400	PF00677	Lumazine binding domain
SH08_RS12405	PF01554	MatE
SH08_RS12410	PF03212	Pertactin
SH08_RS12410	PF16168	SH08_RS12410
SH08_RS12425	PF08803	Putative mono-oxygenase ydhR
SH08_RS12430	PF13454	FAD-NAD(P)-binding
SH08_RS12440	PF01292	Prokaryotic cytochrome b561
SH08_RS12445	PF13247	4Fe-4S dicluster domain
SH08_RS12455	PF01314	Aldehyde ferredoxin oxidoreductase, domains 2 & 3
SH08_RS12455	PF02730	Aldehyde ferredoxin oxidoreductase, N-terminal domain
SH08_RS12460	PF12800	4Fe-4S binding domain
SH08_RS12460	PF13247	4Fe-4S dicluster domain
SH08_RS12465	PF10965	SH08_RS12465
SH08_RS12470	PF00224	Pyruvate kinase, barrel domain
SH08_RS12470	PF02887	Pyruvate kinase, alpha/beta domain
SH08_RS12475	PF04728	Lipoprotein leucine-zipper
SH08_RS12480	PF01476	LysM domain
SH08_RS12480	PF03734	L,D-transpeptidase catalytic domain
SH08_RS12485	PF02657	Fe-S metabolism associated domain
SH08_RS12490	PF00266	Aminotransferase class-V
SH08_RS12495	PF01458	Uncharacterized protein family (UPF0051)
SH08_RS12500	PF00005	ABC transporter
SH08_RS12505	PF01458	Uncharacterized protein family (UPF0051)
SH08_RS12510	PF01521	Iron-sulphur cluster biosynthesis
SH08_RS12515	PF15930	SH08_RS12515
SH08_RS12520	PF03061	Thioesterase superfamily
SH08_RS12525	PF01565	FAD binding domain
SH08_RS12525	PF02913	FAD linked oxidases, C-terminal domain
SH08_RS12525	PF13183	4Fe-4S dicluster domain
SH08_RS12530	PF01594	SH08_RS12530
SH08_RS12535	PF08965	Domain of unknown function (DUF1870)
SH08_RS12540	PF07690	Major Facilitator Superfamily
SH08_RS12545	PF07690	Major Facilitator Superfamily
SH08_RS12550	PF08501	Shikimate dehydrogenase substrate binding domain
SH08_RS12555	PF01487	Type I 3-dehydroquinase
SH08_RS12560	PF01144	Coenzyme A transferase
SH08_RS12565	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
SH08_RS12565	PF02770	Acyl-CoA dehydrogenase, middle domain
SH08_RS12565	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
SH08_RS12570	PF02311	AraC-like ligand binding domain
SH08_RS12570	PF12833	Helix-turn-helix domain
SH08_RS12580	PF01012	Electron transfer flavoprotein domain
SH08_RS12585	PF00766	Electron transfer flavoprotein FAD-binding domain
SH08_RS12585	PF01012	Electron transfer flavoprotein domain
SH08_RS12590	PF01494	FAD binding domain
SH08_RS12605	PF00391	PEP-utilising enzyme, mobile domain
SH08_RS12605	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
SH08_RS12605	PF02896	PEP-utilising enzyme, TIM barrel domain
SH08_RS12615	PF03618	SH08_RS12615
SH08_RS12620	PF00793	DAHP synthetase I family
SH08_RS12625	PF10636	Hemin uptake protein hemP
SH08_RS12630	PF02696	SH08_RS12630
SH08_RS12635	PF00563	EAL domain
SH08_RS12640	PF00877	NlpC/P60 family
SH08_RS12650	PF00255	Glutathione peroxidase
SH08_RS12655	PF01032	FecCD transport family
SH08_RS12660	PF00216	Bacterial DNA-binding protein
SH08_RS12665	PF01588	Putative tRNA binding domain
SH08_RS12665	PF03147	Ferredoxin-fold anticodon binding domain
SH08_RS12665	PF03483	B3/4 domain
SH08_RS12665	PF03484	tRNA synthetase B5 domain
SH08_RS12670	PF01409	tRNA synthetases class II core domain (F)
SH08_RS12670	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
SH08_RS12680	PF00453	Ribosomal protein L20
SH08_RS12685	PF01632	Ribosomal protein L35
SH08_RS12690	PF00707	Translation initiation factor IF-3, C-terminal domain
SH08_RS12690	PF05198	Translation initiation factor IF-3, N-terminal domain
SH08_RS12695	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
SH08_RS12695	PF02824	TGS domain
SH08_RS12695	PF03129	Anticodon binding domain
SH08_RS12695	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
SH08_RS12710	PF04338	Protein of unknown function, DUF481
SH08_RS12715	PF00294	pfkB family carbohydrate kinase
SH08_RS12720	PF11080	Protein of unknown function (DUF2622)
SH08_RS12725	PF03881	Fructosamine kinase
SH08_RS12730	PF14002	SH08_RS12730
SH08_RS12735	PF13419	Haloacid dehalogenase-like hydrolase
SH08_RS12740	PF04307	SH08_RS12740
SH08_RS12745	PF00375	Sodium:dicarboxylate symporter family
SH08_RS12755	PF10729	Cell division activator CedA
SH08_RS12760	PF00199	Catalase
SH08_RS12760	PF06628	Catalase-related immune-responsive
SH08_RS12765	PF04794	YdjC-like protein
SH08_RS12770	PF02056	Family 4 glycosyl hydrolase
SH08_RS12770	PF11975	Family 4 glycosyl hydrolase C-terminal domain
SH08_RS12775	PF07883	Cupin domain
SH08_RS12775	PF12833	Helix-turn-helix domain
SH08_RS12780	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
SH08_RS12785	PF02378	Phosphotransferase system, EIIC
SH08_RS12790	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
SH08_RS12795	PF04355	SmpA / OmlA family
SH08_RS12800	PF02540	NAD synthase
SH08_RS12805	PF12035	SH08_RS12805
SH08_RS12815	PF05962	HutD
SH08_RS12820	PF07813	LTXXQ motif family protein
SH08_RS12825	PF04952	Succinylglutamate desuccinylase / Aspartoacylase family
SH08_RS12830	PF04996	Succinylarginine dihydrolase
SH08_RS12835	PF00171	Aldehyde dehydrogenase family
SH08_RS12840	PF04958	Arginine N-succinyltransferase beta subunit
SH08_RS12845	PF00202	Aminotransferase class-III
SH08_RS12850	PF03372	Endonuclease/Exonuclease/phosphatase family
SH08_RS12855	PF09335	SH08_RS12855
SH08_RS12865	PF09335	SH08_RS12865
SH08_RS12870	PF02627	Carboxymuconolactone decarboxylase family
SH08_RS12875	PF13416	Bacterial extracellular solute-binding protein
SH08_RS12880	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS12885	PF00005	ABC transporter
SH08_RS12890	PF00581	Rhodanese-like domain
SH08_RS12895	PF01066	CDP-alcohol phosphatidyltransferase
SH08_RS12900	PF00293	NUDIX domain
SH08_RS12905	PF07383	SH08_RS12905
SH08_RS12910	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
SH08_RS12910	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
SH08_RS12915	PF06889	SH08_RS12915
SH08_RS12920	PF01131	DNA topoisomerase
SH08_RS12920	PF01751	Toprim domain
SH08_RS12925	PF00586	AIR synthase related protein, N-terminal domain
SH08_RS12925	PF02769	AIR synthase related protein, C-terminal domain
SH08_RS12935	PF00881	Nitroreductase family
SH08_RS12945	PF01343	Peptidase family S49
SH08_RS12950	PF00710	Asparaginase
SH08_RS12955	PF00857	Isochorismatase family
SH08_RS12960	PF00083	Sugar (and other) transporter
SH08_RS12965	PF00455	SH08_RS12965
SH08_RS12965	PF08220	DeoR-like helix-turn-helix domain
SH08_RS12970	PF00248	Aldo/keto reductase family
SH08_RS12975	PF00294	pfkB family carbohydrate kinase
SH08_RS12980	PF01116	Fructose-bisphosphate aldolase class-II
SH08_RS12985	PF00107	Zinc-binding dehydrogenase
SH08_RS12985	PF08240	Alcohol dehydrogenase GroES-like domain
SH08_RS12990	PF00083	Sugar (and other) transporter
SH08_RS12995	PF00107	Zinc-binding dehydrogenase
SH08_RS12995	PF08240	Alcohol dehydrogenase GroES-like domain
SH08_RS13000	PF07023	SH08_RS13000
SH08_RS13005	PF01641	SelR domain
SH08_RS13010	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SH08_RS13010	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
SH08_RS13015	PF01263	Aldose 1-epimerase
SH08_RS13020	PF00248	Aldo/keto reductase family
SH08_RS13025	PF06629	SH08_RS13025
SH08_RS13030	PF06798	SH08_RS13030
SH08_RS13030	PF08298	PrkA AAA domain
SH08_RS13035	PF04285	SH08_RS13035
SH08_RS13040	PF00990	GGDEF domain
SH08_RS13040	PF17158	SH08_RS13040
SH08_RS13045	PF00990	GGDEF domain
SH08_RS13045	PF17155	SH08_RS13045
SH08_RS13050	PF04073	Aminoacyl-tRNA editing domain
SH08_RS13060	PF04284	SH08_RS13060
SH08_RS13065	PF02311	AraC-like ligand binding domain
SH08_RS13065	PF12833	Helix-turn-helix domain
SH08_RS13070	PF07690	Major Facilitator Superfamily
SH08_RS13075	PF04343	SH08_RS13075
SH08_RS13080	PF03891	SH08_RS13080
SH08_RS13085	PF00990	GGDEF domain
SH08_RS13085	PF13185	GAF domain
SH08_RS13095	PF04226	SH08_RS13095
SH08_RS13100	PF08956	Domain of unknown function (DUF1869)
SH08_RS13105	PF09313	Domain of unknown function (DUF1971)
SH08_RS13110	PF01810	SH08_RS13110
SH08_RS13115	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS13115	PF03466	LysR substrate binding domain
SH08_RS13125	PF02028	BCCT family transporter
SH08_RS13130	PF00355	Rieske [2Fe-2S] domain
SH08_RS13130	PF00848	Ring hydroxylating alpha subunit (catalytic domain)
SH08_RS13135	PF00111	2Fe-2S iron-sulfur cluster binding domain
SH08_RS13135	PF00175	Oxidoreductase NAD-binding domain
SH08_RS13135	PF00970	Oxidoreductase FAD-binding domain
SH08_RS13140	PF00570	HRDC domain
SH08_RS13140	PF01612	3'-5' exonuclease
SH08_RS13145	PF00501	AMP-binding enzyme
SH08_RS13145	PF13193	AMP-binding enzyme C-terminal domain
SH08_RS13150	PF03843	SH08_RS13150
SH08_RS13155	PF00814	Glycoprotease family
SH08_RS13160	PF04851	Type III restriction enzyme, res subunit
SH08_RS13160	PF13307	Helicase C-terminal domain
SH08_RS13165	PF01042	Endoribonuclease L-PSP
SH08_RS13170	PF08986	Domain of unknown function (DUF1889)
SH08_RS13175	PF03701	SH08_RS13175
SH08_RS13180	PF00425	chorismate binding enzyme
SH08_RS13180	PF04715	Anthranilate synthase component I, N terminal region
SH08_RS13185	PF00293	NUDIX domain
SH08_RS13190	PF03313	SH08_RS13190
SH08_RS13190	PF03315	Serine dehydratase beta chain
SH08_RS13195	PF00563	EAL domain
SH08_RS13195	PF12792	SH08_RS13195
SH08_RS13200	PF03471	Transporter associated domain
SH08_RS13200	PF03741	SH08_RS13200
SH08_RS13210	PF03610	PTS system fructose IIA component
SH08_RS13210	PF03830	PTS system sorbose subfamily IIB component
SH08_RS13215	PF03609	SH08_RS13215
SH08_RS13220	PF03613	SH08_RS13220
SH08_RS13225	PF06173	SH08_RS13225
SH08_RS13235	PF02659	SH08_RS13235
SH08_RS13240	PF13847	Methyltransferase domain
SH08_RS13245	PF00313	'Cold-shock' DNA-binding domain
SH08_RS13250	PF10736	SH08_RS13250
SH08_RS13260	PF13974	SH08_RS13260
SH08_RS13265	PF13998	SH08_RS13265
SH08_RS13270	PF13996	SH08_RS13270
SH08_RS13275	PF01614	Bacterial transcriptional regulator
SH08_RS13275	PF09339	IclR helix-turn-helix domain
SH08_RS13280	PF07690	Major Facilitator Superfamily
SH08_RS13290	PF00595	PDZ domain (Also known as DHR or GLGF)
SH08_RS13290	PF03572	Peptidase family S41
SH08_RS13290	PF11818	SH08_RS13290
SH08_RS13295	PF04352	ProQ/FINO family
SH08_RS13300	PF13185	GAF domain
SH08_RS13305	PF04403	SH08_RS13305
SH08_RS13310	PF02470	SH08_RS13310
SH08_RS13320	PF07351	SH08_RS13320
SH08_RS13325	PF07358	SH08_RS13325
SH08_RS13330	PF00149	Calcineurin-like phosphoesterase
SH08_RS13340	PF10709	SH08_RS13340
SH08_RS13345	PF05425	SH08_RS13345
SH08_RS13350	PF04234	CopC domain
SH08_RS13355	PF06440	DNA polymerase III, theta subunit
SH08_RS13360	PF00795	Carbon-nitrogen hydrolase
SH08_RS13365	PF00929	Exonuclease
SH08_RS13370	PF00326	Prolyl oligopeptidase family
SH08_RS13370	PF02897	Prolyl oligopeptidase, N-terminal beta-propeller domain
SH08_RS13375	PF04391	SH08_RS13375
SH08_RS13385	PF13995	YebF-like protein
SH08_RS13390	PF07130	YebG protein
SH08_RS13395	PF02222	ATP-grasp domain
SH08_RS13400	PF01081	KDPG and KHG aldolase
SH08_RS13405	PF00920	Dehydratase family
SH08_RS13410	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
SH08_RS13410	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
SH08_RS13420	PF01380	SIS domain
SH08_RS13420	PF01418	Helix-turn-helix domain, rpiR family
SH08_RS13425	PF00224	Pyruvate kinase, barrel domain
SH08_RS13425	PF02887	Pyruvate kinase, alpha/beta domain
SH08_RS13430	PF03279	SH08_RS13430
SH08_RS13435	PF01476	LysM domain
SH08_RS13435	PF01551	Peptidase family M23
SH08_RS13435	PF08525	SH08_RS13435
SH08_RS13440	PF01297	Periplasmic solute binding protein family
SH08_RS13445	PF00005	ABC transporter
SH08_RS13450	PF00950	SH08_RS13450
SH08_RS13455	PF05491	Holliday junction DNA helicase ruvB C-terminus
SH08_RS13455	PF05496	Holliday junction DNA helicase ruvB N-terminus
SH08_RS13460	PF01330	RuvA N terminal domain
SH08_RS13460	PF07499	RuvA, C-terminal domain
SH08_RS13460	PF14520	Helix-hairpin-helix domain
SH08_RS13465	PF05708	Orthopoxvirus protein of unknown function (DUF830)
SH08_RS13470	PF02075	Crossover junction endodeoxyribonuclease RuvC
SH08_RS13475	PF01709	Transcriptional regulator
SH08_RS13480	PF00293	NUDIX domain
SH08_RS13485	PF00152	tRNA synthetases class II (D, K and N)
SH08_RS13485	PF01336	OB-fold nucleic acid binding domain
SH08_RS13485	PF02938	GAD domain
SH08_RS13490	PF00857	Isochorismatase family
SH08_RS13495	PF01904	Protein of unknown function DUF72
SH08_RS13500	PF01124	MAPEG family
SH08_RS13505	PF13649	Methyltransferase domain
SH08_RS13510	PF08003	Protein of unknown function (DUF1698)
SH08_RS13515	PF00384	Molybdopterin oxidoreductase
SH08_RS13515	PF01568	Molydopterin dinucleotide binding domain
SH08_RS13520	PF03264	NapC/NirT cytochrome c family, N-terminal region
SH08_RS13525	PF03932	CutC family
SH08_RS13530	PF06185	YecM protein
SH08_RS13535	PF00750	tRNA synthetases class I (R)
SH08_RS13535	PF03485	Arginyl tRNA synthetase N terminal domain
SH08_RS13535	PF05746	DALR anticodon binding domain
SH08_RS13540	PF07007	Protein of unknown function (DUF1311)
SH08_RS13545	PF06366	SH08_RS13545
SH08_RS13550	PF00771	FHIPEP family
SH08_RS13555	PF01312	FlhB HrpN YscU SpaS Family
SH08_RS13560	PF04344	Chemotaxis phosphatase, CheZ
SH08_RS13565	PF00072	Response regulator receiver domain
SH08_RS13570	PF00072	Response regulator receiver domain
SH08_RS13570	PF01339	CheB methylesterase
SH08_RS13575	PF01739	CheR methyltransferase, SAM binding domain
SH08_RS13575	PF03705	CheR methyltransferase, all-alpha domain
SH08_RS13580	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SH08_RS13580	PF00672	HAMP domain
SH08_RS13580	PF02203	Tar ligand binding domain homologue
SH08_RS13585	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SH08_RS13585	PF00672	HAMP domain
SH08_RS13585	PF02203	Tar ligand binding domain homologue
SH08_RS13590	PF01584	CheW-like domain
SH08_RS13595	PF01584	CheW-like domain
SH08_RS13595	PF01627	Hpt domain
SH08_RS13595	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH08_RS13595	PF02895	Signal transducing histidine kinase, homodimeric domain
SH08_RS13595	PF09078	CheY binding
SH08_RS13600	PF00691	OmpA family
SH08_RS13600	PF13677	SH08_RS13600
SH08_RS13605	PF01618	SH08_RS13605
SH08_RS13610	PF05280	Flagellar transcriptional activator (FlhC)
SH08_RS13615	PF05247	Flagellar transcriptional activator (FlhD)
SH08_RS13620	PF00582	Universal stress protein family
SH08_RS13625	PF00982	Glycosyltransferase family 20
SH08_RS13630	PF02358	Trehalose-phosphatase
SH08_RS13635	PF02653	SH08_RS13635
SH08_RS13640	PF00005	ABC transporter
SH08_RS13645	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
SH08_RS13650	PF00210	Ferritin-like domain
SH08_RS13655	PF10964	SH08_RS13655
SH08_RS13665	PF13992	SH08_RS13665
SH08_RS13670	PF00210	Ferritin-like domain
SH08_RS13675	PF10678	SH08_RS13675
SH08_RS13680	PF03222	Tryptophan/tyrosine permease family
SH08_RS13685	PF02810	SEC-C motif
SH08_RS13685	PF03695	Uncharacterised protein family (UPF0149)
SH08_RS13705	PF01066	CDP-alcohol phosphatidyltransferase
SH08_RS13710	PF01541	GIY-YIG catalytic domain
SH08_RS13710	PF02151	UvrB/uvrC motif
SH08_RS13710	PF08459	UvrC Helix-hairpin-helix N-terminal
SH08_RS13710	PF14520	Helix-hairpin-helix domain
SH08_RS13715	PF00072	Response regulator receiver domain
SH08_RS13715	PF00196	Bacterial regulatory proteins, luxR family
SH08_RS13725	PF10769	SH08_RS13725
SH08_RS13730	PF00196	Bacterial regulatory proteins, luxR family
SH08_RS13730	PF03472	Autoinducer binding domain
SH08_RS13735	PF00005	ABC transporter
SH08_RS13740	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS13745	PF00291	Pyridoxal-phosphate dependent enzyme
SH08_RS13750	PF00497	Bacterial extracellular solute-binding proteins, family 3
SH08_RS13755	PF02899	Phage integrase, N-terminal SAM-like domain
SH08_RS13760	PF04539	Sigma-70 region 3
SH08_RS13760	PF04542	Sigma-70 region 2
SH08_RS13760	PF04545	Sigma-70, region 4
SH08_RS13765	PF00669	Bacterial flagellin N-terminal helical region
SH08_RS13765	PF00700	Bacterial flagellin C-terminal helical region
SH08_RS13765	PF08884	Flagellin D3 domain
SH08_RS13770	PF02465	SH08_RS13770
SH08_RS13770	PF07195	SH08_RS13770
SH08_RS13775	PF02561	Flagellar protein FliS
SH08_RS13780	PF05400	Flagellar protein FliT
SH08_RS13785	PF00128	Alpha amylase, catalytic domain
SH08_RS13785	PF02806	Alpha amylase, C-terminal all-beta domain
SH08_RS13790	PF13987	YedD-like protein
SH08_RS13795	PF04143	SH08_RS13795
SH08_RS13800	PF01206	Sulfurtransferase TusA
SH08_RS13805	PF02586	Uncharacterised ACR, COG2135
SH08_RS13810	PF00583	Acetyltransferase (GNAT) family
SH08_RS13830	PF02049	SH08_RS13830
SH08_RS13835	PF01514	Secretory protein of YscJ/FliF family
SH08_RS13835	PF08345	SH08_RS13835
SH08_RS13840	PF01706	FliG C-terminal domain
SH08_RS13840	PF14841	FliG middle domain
SH08_RS13840	PF14842	FliG N-terminal domain
SH08_RS13845	PF02108	SH08_RS13845
SH08_RS13850	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
SH08_RS13855	PF02050	Flagellar FliJ protein
SH08_RS13860	PF02120	Flagellar hook-length control protein FliK
SH08_RS13865	PF03748	SH08_RS13865
SH08_RS13870	PF01052	Surface presentation of antigens (SPOA)
SH08_RS13870	PF02154	Flagellar motor switch protein FliM
SH08_RS13875	PF01052	Surface presentation of antigens (SPOA)
SH08_RS13875	PF16973	SH08_RS13875
SH08_RS13880	PF04347	SH08_RS13880
SH08_RS13885	PF00813	SH08_RS13885
SH08_RS13890	PF01313	SH08_RS13890
SH08_RS13895	PF01311	SH08_RS13895
SH08_RS13900	PF00196	Bacterial regulatory proteins, luxR family
SH08_RS13905	PF10781	SH08_RS13905
SH08_RS13910	PF10733	SH08_RS13910
SH08_RS13915	PF08282	haloacid dehalogenase-like hydrolase
SH08_RS13920	PF00990	GGDEF domain
SH08_RS13920	PF17151	SH08_RS13920
SH08_RS13925	PF09926	SH08_RS13925
SH08_RS13930	PF05661	SH08_RS13930
SH08_RS13935	PF00892	EamA-like transporter family
SH08_RS13940	PF03852	DNA mismatch endonuclease Vsr
SH08_RS13945	PF00145	C-5 cytosine-specific DNA methylase
SH08_RS13950	PF01966	HD domain
SH08_RS13980	PF00512	His Kinase A (phospho-acceptor) domain
SH08_RS13980	PF00672	HAMP domain
SH08_RS13980	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH08_RS13985	PF00072	Response regulator receiver domain
SH08_RS13985	PF00486	Transcriptional regulatory protein, C terminal
SH08_RS13990	PF00576	HIUase/Transthyretin family
SH08_RS13995	PF00174	Oxidoreductase molybdopterin binding domain
SH08_RS14000	PF01794	SH08_RS14000
SH08_RS14005	PF09223	YodA lipocalin-like domain
SH08_RS14010	PF01292	Prokaryotic cytochrome b561
SH08_RS14025	PF06167	Glucose-regulated metallo-peptidase M90
SH08_RS14035	PF02369	Bacterial Ig-like domain (group 1)
SH08_RS14035	PF09134	Invasin, domain 3
SH08_RS14035	PF11924	Protein of unknown function (DUF3442)
SH08_RS14045	PF00083	Sugar (and other) transporter
SH08_RS14045	PF07690	Major Facilitator Superfamily
SH08_RS14050	PF01048	Phosphorylase superfamily
SH08_RS14050	PF10423	Bacterial AMP nucleoside phosphorylase N-terminus
SH08_RS14055	PF01709	Transcriptional regulator
SH08_RS14065	PF01554	MatE
SH08_RS14075	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS14075	PF03466	LysR substrate binding domain
SH08_RS14080	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS14080	PF03466	LysR substrate binding domain
SH08_RS14090	PF03734	L,D-transpeptidase catalytic domain
SH08_RS14095	PF02277	Phosphoribosyltransferase
SH08_RS14100	PF02654	SH08_RS14100
SH08_RS14105	PF02283	Cobinamide kinase / cobinamide phosphate guanyltransferase
SH08_RS14115	PF01609	Transposase DDE domain
SH08_RS14115	PF05598	SH08_RS14115
SH08_RS14125	PF00665	Integrase core domain
SH08_RS14125	PF13276	SH08_RS14125
SH08_RS14130	PF01527	Transposase
SH08_RS14135	PF07715	TonB-dependent Receptor Plug Domain
SH08_RS14145	PF03797	Autotransporter beta-domain
SH08_RS14145	PF13018	SH08_RS14145
SH08_RS14145	PF16168	SH08_RS14145
SH08_RS14155	PF04002	RadC-like JAB domain
SH08_RS14160	PF06174	SH08_RS14160
SH08_RS14165	PF06154	YagB/YeeU/YfjZ family
SH08_RS14170	PF06755	SH08_RS14170
SH08_RS14180	PF06117	SH08_RS14180
SH08_RS14185	PF10662	Ethanolamine utilisation - propanediol utilisation
SH08_RS14190	PF04363	SH08_RS14190
SH08_RS14195	PF04632	SH08_RS14195
SH08_RS14200	PF06445	GyrI-like small molecule binding domain
SH08_RS14205	PF00768	D-alanyl-D-alanine carboxypeptidase
SH08_RS14205	PF07943	Penicillin-binding protein 5, C-terminal domain
SH08_RS14210	PF00929	Exonuclease
SH08_RS14210	PF08411	Exonuclease C-terminal
SH08_RS14215	PF01206	Sulfurtransferase TusA
SH08_RS14220	PF04143	SH08_RS14220
SH08_RS14225	PF13520	Amino acid permease
SH08_RS14230	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS14230	PF03466	LysR substrate binding domain
SH08_RS14235	PF01370	NAD dependent epimerase/dehydratase family
SH08_RS14240	PF06769	Plasmid encoded toxin Txe
SH08_RS14245	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
SH08_RS14250	PF01634	ATP phosphoribosyltransferase
SH08_RS14250	PF08029	HisG, C-terminal domain
SH08_RS14255	PF00815	Histidinol dehydrogenase
SH08_RS14260	PF00155	Aminotransferase class I and II
SH08_RS14265	PF00475	Imidazoleglycerol-phosphate dehydratase
SH08_RS14265	PF08645	Polynucleotide kinase 3 phosphatase
SH08_RS14270	PF00117	Glutamine amidotransferase class-I
SH08_RS14275	PF00977	Histidine biosynthesis protein
SH08_RS14280	PF00977	Histidine biosynthesis protein
SH08_RS14285	PF01502	Phosphoribosyl-AMP cyclohydrolase
SH08_RS14285	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
SH08_RS14290	PF02706	Chain length determinant protein
SH08_RS14295	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
SH08_RS14295	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
SH08_RS14295	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
SH08_RS14300	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
SH08_RS14300	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
SH08_RS14305	PF01609	Transposase DDE domain
SH08_RS14305	PF05598	SH08_RS14305
SH08_RS14310	PF00535	Glycosyl transferase family 2
SH08_RS14315	PF00534	Glycosyl transferases group 1
SH08_RS14320	PF00132	Bacterial transferase hexapeptide (six repeats)
SH08_RS14335	PF03275	UDP-galactopyranose mutase
SH08_RS14335	PF13450	NAD(P)-binding Rossmann-like domain
SH08_RS14340	PF01943	SH08_RS14340
SH08_RS14345	PF00908	dTDP-4-dehydrorhamnose 3,5-epimerase
SH08_RS14350	PF00483	Nucleotidyl transferase
SH08_RS14360	PF16363	SH08_RS14360
SH08_RS14365	PF00483	Nucleotidyl transferase
SH08_RS14380	PF04230	SH08_RS14380
SH08_RS14385	PF13440	SH08_RS14385
SH08_RS14390	PF02397	SH08_RS14390
SH08_RS14390	PF13727	CoA-binding domain
SH08_RS14395	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
SH08_RS14395	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
SH08_RS14395	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
SH08_RS14395	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
SH08_RS14400	PF00483	Nucleotidyl transferase
SH08_RS14400	PF01050	Mannose-6-phosphate isomerase
SH08_RS14405	PF00534	Glycosyl transferases group 1
SH08_RS14405	PF13579	Glycosyl transferase 4-like domain
SH08_RS14410	PF00293	NUDIX domain
SH08_RS14415	PF01370	NAD dependent epimerase/dehydratase family
SH08_RS14420	PF16363	SH08_RS14420
SH08_RS14425	PF00132	Bacterial transferase hexapeptide (six repeats)
SH08_RS14430	PF00535	Glycosyl transferase family 2
SH08_RS14440	PF00534	Glycosyl transferases group 1
SH08_RS14440	PF13439	Glycosyltransferase Family 4
SH08_RS14445	PF00132	Bacterial transferase hexapeptide (six repeats)
SH08_RS14450	PF00535	Glycosyl transferase family 2
SH08_RS14455	PF02706	Chain length determinant protein
SH08_RS14455	PF13614	AAA domain
SH08_RS14455	PF13807	SH08_RS14455
SH08_RS14460	PF01451	Low molecular weight phosphotyrosine protein phosphatase
SH08_RS14465	PF02563	Polysaccharide biosynthesis/export protein
SH08_RS14465	PF10531	SLBB domain
SH08_RS14470	PF00571	CBS domain
SH08_RS14470	PF03471	Transporter associated domain
SH08_RS14470	PF03741	SH08_RS14470
SH08_RS14475	PF05170	SH08_RS14475
SH08_RS14480	PF00692	dUTPase
SH08_RS14485	PF00485	Phosphoribulokinase / Uridine kinase family
SH08_RS14490	PF00563	EAL domain
SH08_RS14490	PF00990	GGDEF domain
SH08_RS14490	PF05231	SH08_RS14490
SH08_RS14490	PF08447	PAS fold
SH08_RS14490	PF08448	PAS fold
SH08_RS14490	PF13426	PAS domain
SH08_RS14495	PF00730	HhH-GPD superfamily base excision DNA repair protein
SH08_RS14495	PF06029	AlkA N-terminal domain
SH08_RS14505	PF00012	Hsp70 protein
SH08_RS14515	PF10077	SH08_RS14515
SH08_RS14520	PF13672	Protein phosphatase 2C
SH08_RS14525	PF00092	von Willebrand factor type A domain
SH08_RS14530	PF13437	HlyD family secretion protein
SH08_RS14530	PF13533	Biotin-lipoyl like
SH08_RS14535	PF00873	AcrB/AcrD/AcrF family
SH08_RS14540	PF00873	AcrB/AcrD/AcrF family
SH08_RS14545	PF07690	Major Facilitator Superfamily
SH08_RS14550	PF00512	His Kinase A (phospho-acceptor) domain
SH08_RS14550	PF00672	HAMP domain
SH08_RS14550	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH08_RS14555	PF00072	Response regulator receiver domain
SH08_RS14555	PF00486	Transcriptional regulatory protein, C terminal
SH08_RS14560	PF07411	Domain of unknown function (DUF1508)
SH08_RS14565	PF01136	SH08_RS14565
SH08_RS14565	PF16325	SH08_RS14565
SH08_RS14585	PF00781	Diacylglycerol kinase catalytic domain
SH08_RS14590	PF00455	SH08_RS14590
SH08_RS14595	PF01527	Transposase
SH08_RS14600	PF00665	Integrase core domain
SH08_RS14600	PF13276	SH08_RS14600
SH08_RS14605	PF08220	DeoR-like helix-turn-helix domain
SH08_RS14610	PF00107	Zinc-binding dehydrogenase
SH08_RS14610	PF08240	Alcohol dehydrogenase GroES-like domain
SH08_RS14615	PF03611	SH08_RS14615
SH08_RS14620	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
SH08_RS14625	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
SH08_RS14630	PF08013	Tagatose 6 phosphate kinase
SH08_RS14635	PF01116	Fructose-bisphosphate aldolase class-II
SH08_RS14640	PF01791	DeoC/LacD family aldolase
SH08_RS14645	PF03825	SH08_RS14645
SH08_RS14650	PF03747	ADP-ribosylglycohydrolase
SH08_RS14655	PF00294	pfkB family carbohydrate kinase
SH08_RS14660	PF00392	Bacterial regulatory proteins, gntR family
SH08_RS14660	PF07702	UTRA domain
SH08_RS14665	PF01183	Glycosyl hydrolases family 25
SH08_RS14670	PF08543	Phosphomethylpyrimidine kinase
SH08_RS14675	PF02110	Hydroxyethylthiazole kinase family
SH08_RS14680	PF02583	Metal-sensitive transcriptional repressor
SH08_RS14685	PF03824	SH08_RS14685
SH08_RS14690	PF11776	Domain of unknown function (DUF3315)
SH08_RS14695	PF00419	Fimbrial protein
SH08_RS14700	PF00577	Outer membrane usher protein
SH08_RS14700	PF13953	PapC C-terminal domain
SH08_RS14700	PF13954	PapC N-terminal domain
SH08_RS14705	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
SH08_RS14705	PF02753	Pili assembly chaperone PapD, C-terminal domain
SH08_RS14710	PF00419	Fimbrial protein
SH08_RS14720	PF10836	SH08_RS14720
SH08_RS14725	PF10609	ParA/MinD ATPase like
SH08_RS14730	PF01588	Putative tRNA binding domain
SH08_RS14730	PF09334	tRNA synthetases class I (M)
SH08_RS14735	PF05406	WGR domain
SH08_RS14745	PF13569	SH08_RS14745
SH08_RS14755	PF07728	AAA domain (dynein-related subfamily)
SH08_RS14765	PF05762	VWA domain containing CoxE-like protein
SH08_RS14770	PF04434	SH08_RS14770
SH08_RS14775	PF06998	Protein of unknown function (DUF1307)
SH08_RS14780	PF07308	SH08_RS14780
SH08_RS14785	PF00072	Response regulator receiver domain
SH08_RS14785	PF04397	LytTr DNA-binding domain
SH08_RS14790	PF06580	SH08_RS14790
SH08_RS14790	PF07694	5TMR of 5TMR-LYT
SH08_RS14790	PF13492	GAF domain
SH08_RS14795	PF13411	MerR HTH family regulatory protein
SH08_RS14805	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS14810	PF00005	ABC transporter
SH08_RS14815	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS14820	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
SH08_RS14825	PF00933	Glycosyl hydrolase family 3 N terminal domain
SH08_RS14825	PF01915	Glycosyl hydrolase family 3 C-terminal domain
SH08_RS14825	PF14310	Fibronectin type III-like domain
SH08_RS14830	PF01565	FAD binding domain
SH08_RS14830	PF09330	D-lactate dehydrogenase, membrane binding
SH08_RS14835	PF00768	D-alanyl-D-alanine carboxypeptidase
SH08_RS14840	PF06930	SH08_RS14840
SH08_RS14845	PF09335	SH08_RS14845
SH08_RS14850	PF13561	Enoyl-(Acyl carrier protein) reductase
SH08_RS14865	PF01207	Dihydrouridine synthase (Dus)
SH08_RS14870	PF03788	SH08_RS14870
SH08_RS14875	PF04172	SH08_RS14875
SH08_RS14880	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
SH08_RS14880	PF08211	Cytidine and deoxycytidylate deaminase zinc-binding region
SH08_RS14885	PF02698	DUF218 domain
SH08_RS14890	PF10808	SH08_RS14890
SH08_RS14895	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SH08_RS14895	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
SH08_RS14900	PF01180	Dihydroorotate dehydrogenase
SH08_RS14900	PF14697	4Fe-4S dicluster domain
SH08_RS14905	PF02653	SH08_RS14905
SH08_RS14910	PF03400	SH08_RS14910
SH08_RS14920	PF13407	Periplasmic binding protein domain
SH08_RS14925	PF00356	Bacterial regulatory proteins, lacI family
SH08_RS14925	PF13377	Periplasmic binding protein-like domain
SH08_RS14935	PF04235	SH08_RS14935
SH08_RS14940	PF01227	GTP cyclohydrolase I
SH08_RS14950	PF00756	Putative esterase
SH08_RS14955	PF00593	TonB dependent receptor
SH08_RS14955	PF07715	TonB-dependent Receptor Plug Domain
SH08_RS14960	PF00324	Amino acid permease
SH08_RS14965	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS14965	PF03466	LysR substrate binding domain
SH08_RS14970	PF03601	SH08_RS14970
SH08_RS14975	PF01261	Xylose isomerase-like TIM barrel
SH08_RS14980	PF00294	pfkB family carbohydrate kinase
SH08_RS14980	PF13412	Winged helix-turn-helix DNA-binding
SH08_RS14985	PF01773	Na+ dependent nucleoside transporter N-terminus
SH08_RS14985	PF07662	Na+ dependent nucleoside transporter C-terminus
SH08_RS14990	PF01156	Inosine-uridine preferring nucleoside hydrolase
SH08_RS14995	PF00027	Cyclic nucleotide-binding domain
SH08_RS15000	PF01773	Na+ dependent nucleoside transporter N-terminus
SH08_RS15000	PF07662	Na+ dependent nucleoside transporter C-terminus
SH08_RS15005	PF04227	Indigoidine synthase A like protein
SH08_RS15010	PF00294	pfkB family carbohydrate kinase
SH08_RS15015	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
SH08_RS15015	PF02378	Phosphotransferase system, EIIC
SH08_RS15020	PF00294	pfkB family carbohydrate kinase
SH08_RS15025	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
SH08_RS15025	PF00381	PTS HPr component phosphorylation site
SH08_RS15030	PF07690	Major Facilitator Superfamily
SH08_RS15035	PF03692	SH08_RS15035
SH08_RS15040	PF01132	Elongation factor P (EF-P) OB domain
SH08_RS15040	PF08207	Elongation factor P (EF-P) KOW-like domain
SH08_RS15040	PF09285	Elongation factor P, C-terminal
SH08_RS15045	PF01232	Mannitol dehydrogenase Rossmann domain
SH08_RS15045	PF08125	Mannitol dehydrogenase C-terminal domain
SH08_RS15050	PF02492	CobW/HypB/UreG, nucleotide-binding domain
SH08_RS15050	PF07683	Cobalamin synthesis protein cobW C-terminal domain
SH08_RS15055	PF01569	PAP2 superfamily
SH08_RS15060	PF00877	NlpC/P60 family
SH08_RS15065	PF00563	EAL domain
SH08_RS15065	PF12792	SH08_RS15065
SH08_RS15070	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
SH08_RS15075	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS15080	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS15080	PF12911	SH08_RS15080
SH08_RS15085	PF00005	ABC transporter
SH08_RS15085	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
SH08_RS15090	PF13989	SH08_RS15090
SH08_RS15095	PF07690	Major Facilitator Superfamily
SH08_RS15100	PF00849	RNA pseudouridylate synthase
SH08_RS15100	PF01479	S4 domain
SH08_RS15105	PF00271	Helicase conserved C-terminal domain
SH08_RS15105	PF04851	Type III restriction enzyme, res subunit
SH08_RS15110	PF01386	Ribosomal L25p family
SH08_RS15115	PF04245	SH08_RS15115
SH08_RS15120	PF07208	Protein of unknown function (DUF1414)
SH08_RS15125	PF00884	Sulfatase
SH08_RS15125	PF11893	SH08_RS15125
SH08_RS15135	PF03212	Pertactin
SH08_RS15135	PF03797	Autotransporter beta-domain
SH08_RS15135	PF16168	SH08_RS15135
SH08_RS15140	PF01609	Transposase DDE domain
SH08_RS15140	PF05598	SH08_RS15140
SH08_RS15150	PF00072	Response regulator receiver domain
SH08_RS15150	PF00196	Bacterial regulatory proteins, luxR family
SH08_RS15155	PF03918	Cytochrome C biogenesis protein
SH08_RS15160	PF08534	Redoxin
SH08_RS15165	PF01578	SH08_RS15165
SH08_RS15165	PF16327	SH08_RS15165
SH08_RS15170	PF03100	CcmE
SH08_RS15175	PF04995	SH08_RS15175
SH08_RS15180	PF01578	SH08_RS15180
SH08_RS15185	PF03379	SH08_RS15185
SH08_RS15190	PF00005	ABC transporter
SH08_RS15195	PF03264	NapC/NirT cytochrome c family, N-terminal region
SH08_RS15200	PF03892	Nitrate reductase cytochrome c-type subunit (NapB)
SH08_RS15205	PF12801	SH08_RS15205
SH08_RS15205	PF13237	4Fe-4S dicluster domain
SH08_RS15210	PF12800	4Fe-4S binding domain
SH08_RS15210	PF12838	4Fe-4S dicluster domain
SH08_RS15215	PF00384	Molybdopterin oxidoreductase
SH08_RS15215	PF01568	Molydopterin dinucleotide binding domain
SH08_RS15215	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
SH08_RS15220	PF03927	NapD protein
SH08_RS15225	PF00037	4Fe-4S binding domain
SH08_RS15225	PF12800	4Fe-4S binding domain
SH08_RS15225	PF13187	4Fe-4S dicluster domain
SH08_RS15235	PF03974	Ecotin
SH08_RS15240	PF06039	SH08_RS15240
SH08_RS15245	PF00005	ABC transporter
SH08_RS15245	PF00664	ABC transporter transmembrane region
SH08_RS15250	PF13532	2OG-Fe(II) oxygenase superfamily
SH08_RS15255	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
SH08_RS15255	PF02805	Metal binding domain of Ada
SH08_RS15255	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
SH08_RS15255	PF12833	Helix-turn-helix domain
SH08_RS15260	PF02424	ApbE family
SH08_RS15265	PF00267	Gram-negative porin
SH08_RS15280	PF01627	Hpt domain
SH08_RS15280	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH08_RS15280	PF16359	SH08_RS15280
SH08_RS15285	PF00072	Response regulator receiver domain
SH08_RS15285	PF00196	Bacterial regulatory proteins, luxR family
SH08_RS15290	PF00072	Response regulator receiver domain
SH08_RS15290	PF00512	His Kinase A (phospho-acceptor) domain
SH08_RS15290	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH08_RS15290	PF09456	RcsC Alpha-Beta-Loop (ABL)
SH08_RS15295	PF00512	His Kinase A (phospho-acceptor) domain
SH08_RS15295	PF00672	HAMP domain
SH08_RS15295	PF00989	PAS fold
SH08_RS15295	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH08_RS15300	PF00072	Response regulator receiver domain
SH08_RS15300	PF00158	Sigma-54 interaction domain
SH08_RS15300	PF02954	Bacterial regulatory protein, Fis family
SH08_RS15305	PF01144	Coenzyme A transferase
SH08_RS15310	PF01144	Coenzyme A transferase
SH08_RS15315	PF02667	SH08_RS15315
SH08_RS15320	PF00108	Thiolase, N-terminal domain
SH08_RS15320	PF02803	Thiolase, C-terminal domain
SH08_RS15325	PF09906	SH08_RS15325
SH08_RS15330	PF08486	SH08_RS15330
SH08_RS15330	PF10062	SH08_RS15330
SH08_RS15340	PF00207	Alpha-2-macroglobulin family
SH08_RS15340	PF01835	MG2 domain
SH08_RS15340	PF07703	Alpha-2-macroglobulin family N-terminal region
SH08_RS15345	PF06672	SH08_RS15345
SH08_RS15350	PF09909	SH08_RS15350
SH08_RS15355	PF00521	DNA gyrase/topoisomerase IV, subunit A
SH08_RS15355	PF03989	DNA gyrase C-terminal domain, beta-propeller
SH08_RS15360	PF13489	Methyltransferase domain
SH08_RS15365	PF02415	SH08_RS15365
SH08_RS15365	PF03797	Autotransporter beta-domain
SH08_RS15365	PF12951	SH08_RS15365
SH08_RS15375	PF00317	Ribonucleotide reductase, all-alpha domain
SH08_RS15375	PF02867	Ribonucleotide reductase, barrel domain
SH08_RS15375	PF03477	ATP cone domain
SH08_RS15380	PF00268	Ribonucleotide reductase, small chain
SH08_RS15385	PF00111	2Fe-2S iron-sulfur cluster binding domain
SH08_RS15390	PF06293	Lipopolysaccharide kinase (Kdo/WaaP) family
SH08_RS15400	PF03009	Glycerophosphoryl diester phosphodiesterase family
SH08_RS15405	PF07690	Major Facilitator Superfamily
SH08_RS15410	PF01266	FAD dependent oxidoreductase
SH08_RS15410	PF04324	BFD-like [2Fe-2S] binding domain
SH08_RS15415	PF00890	FAD binding domain
SH08_RS15420	PF02754	SH08_RS15420
SH08_RS15420	PF13183	4Fe-4S dicluster domain
SH08_RS15425	PF04754	SH08_RS15425
SH08_RS15435	PF03328	HpcH/HpaI aldolase/citrate lyase family
SH08_RS15440	PF07690	Major Facilitator Superfamily
SH08_RS15450	PF01614	Bacterial transcriptional regulator
SH08_RS15450	PF09339	IclR helix-turn-helix domain
SH08_RS15455	PF00994	Probable molybdopterin binding domain
SH08_RS15460	PF07437	SH08_RS15460
SH08_RS15465	PF00293	NUDIX domain
SH08_RS15470	PF00300	Histidine phosphatase superfamily (branch 1)
SH08_RS15475	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
SH08_RS15480	PF00535	Glycosyl transferase family 2
SH08_RS15485	PF00551	Formyl transferase
SH08_RS15485	PF01370	NAD dependent epimerase/dehydratase family
SH08_RS15485	PF02911	Formyl transferase, C-terminal domain
SH08_RS15490	PF01522	Polysaccharide deacetylase
SH08_RS15495	PF02366	SH08_RS15495
SH08_RS15500	PF00892	EamA-like transporter family
SH08_RS15510	PF11183	Polymyxin resistance protein PmrD
SH08_RS15515	PF00501	AMP-binding enzyme
SH08_RS15515	PF13193	AMP-binding enzyme C-terminal domain
SH08_RS15520	PF13378	Enolase C-terminal domain-like
SH08_RS15525	PF00378	Enoyl-CoA hydratase/isomerase family
SH08_RS15530	PF12697	Alpha/beta hydrolase family
SH08_RS15535	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
SH08_RS15535	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
SH08_RS15535	PF16582	SH08_RS15535
SH08_RS15540	PF00425	chorismate binding enzyme
SH08_RS15545	PF05957	SH08_RS15545
SH08_RS15550	PF13673	Acetyltransferase (GNAT) domain
SH08_RS15555	PF12706	Beta-lactamase superfamily domain
SH08_RS15560	PF02902	Ulp1 protease family, C-terminal catalytic domain
SH08_RS15565	PF00092	von Willebrand factor type A domain
SH08_RS15565	PF12034	SH08_RS15565
SH08_RS15565	PF12450	SH08_RS15565
SH08_RS15570	PF04389	Peptidase family M28
SH08_RS15575	PF08974	Domain of unknown function (DUF1877)
SH08_RS15595	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
SH08_RS15600	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
SH08_RS15605	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
SH08_RS15605	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
SH08_RS15610	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
SH08_RS15615	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
SH08_RS15620	PF12838	4Fe-4S dicluster domain
SH08_RS15625	PF00146	NADH dehydrogenase
SH08_RS15630	PF00384	Molybdopterin oxidoreductase
SH08_RS15630	PF01568	Molydopterin dinucleotide binding domain
SH08_RS15630	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
SH08_RS15630	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
SH08_RS15630	PF13510	2Fe-2S iron-sulfur cluster binding domain
SH08_RS15635	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
SH08_RS15635	PF10531	SLBB domain
SH08_RS15635	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
SH08_RS15640	PF01257	Thioredoxin-like [2Fe-2S] ferredoxin
SH08_RS15645	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
SH08_RS15645	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
SH08_RS15650	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
SH08_RS15655	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
SH08_RS15660	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS15660	PF03466	LysR substrate binding domain
SH08_RS15665	PF00155	Aminotransferase class I and II
SH08_RS15670	PF13023	HD domain
SH08_RS15675	PF02080	TrkA-C domain
SH08_RS15675	PF03600	Citrate transporter
SH08_RS15680	PF13419	Haloacid dehalogenase-like hydrolase
SH08_RS15685	PF03887	YfbU domain
SH08_RS15690	PF04217	SH08_RS15690
SH08_RS15700	PF00871	Acetokinase family
SH08_RS15705	PF01515	Phosphate acetyl/butaryl transferase
SH08_RS15705	PF07085	DRTGG domain
SH08_RS15705	PF13500	AAA domain
SH08_RS15710	PF03606	SH08_RS15710
SH08_RS15715	PF00293	NUDIX domain
SH08_RS15720	PF12850	Calcineurin-like phosphoesterase superfamily domain
SH08_RS15725	PF13417	Glutathione S-transferase, N-terminal domain
SH08_RS15725	PF14834	Glutathione S-transferase, C-terminal domain
SH08_RS15730	PF00043	Glutathione S-transferase, C-terminal domain
SH08_RS15730	PF02798	Glutathione S-transferase, N-terminal domain
SH08_RS15735	PF02152	Dihydroneopterin aldolase
SH08_RS15740	PF01370	NAD dependent epimerase/dehydratase family
SH08_RS15740	PF08338	Domain of unknown function (DUF1731)
SH08_RS15745	PF04754	SH08_RS15745
SH08_RS15750	PF00005	ABC transporter
SH08_RS15755	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS15760	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS15765	PF00497	Bacterial extracellular solute-binding proteins, family 3
SH08_RS15770	PF00497	Bacterial extracellular solute-binding proteins, family 3
SH08_RS15775	PF02441	Flavoprotein
SH08_RS15780	PF00156	Phosphoribosyl transferase domain
SH08_RS15780	PF13522	Glutamine amidotransferase domain
SH08_RS15785	PF02674	SH08_RS15785
SH08_RS15790	PF05036	Sporulation related domain
SH08_RS15795	PF02875	Mur ligase family, glutamate ligase domain
SH08_RS15795	PF08245	Mur ligase middle domain
SH08_RS15800	PF01039	Carboxyl transferase domain
SH08_RS15805	PF09335	SH08_RS15805
SH08_RS15810	PF01416	tRNA pseudouridine synthase
SH08_RS15815	PF01118	Semialdehyde dehydrogenase, NAD binding domain
SH08_RS15815	PF02774	Semialdehyde dehydrogenase, dimerisation domain
SH08_RS15820	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
SH08_RS15820	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
SH08_RS15820	PF11890	Domain of unknown function (DUF3410)
SH08_RS15830	PF07690	Major Facilitator Superfamily
SH08_RS15835	PF00109	Beta-ketoacyl synthase, N-terminal domain
SH08_RS15835	PF02801	Beta-ketoacyl synthase, C-terminal domain
SH08_RS15840	PF01266	FAD dependent oxidoreductase
SH08_RS15840	PF05430	S-adenosyl-L-methionine-dependent methyltransferase
SH08_RS15845	PF08891	SH08_RS15845
SH08_RS15850	PF04315	SH08_RS15850
SH08_RS15855	PF01925	SH08_RS15855
SH08_RS15860	PF03411	Penicillin-insensitive murein endopeptidase
SH08_RS15865	PF01264	Chorismate synthase
SH08_RS15870	PF05175	Methyltransferase small domain
SH08_RS15875	PF01713	Smr domain
SH08_RS15880	PF11245	SH08_RS15880
SH08_RS15885	PF00419	Fimbrial protein
SH08_RS15890	PF00419	Fimbrial protein
SH08_RS15895	PF00419	Fimbrial protein
SH08_RS15900	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
SH08_RS15900	PF02753	Pili assembly chaperone PapD, C-terminal domain
SH08_RS15910	PF00419	Fimbrial protein
SH08_RS15915	PF00300	Histidine phosphatase superfamily (branch 1)
SH08_RS15920	PF00378	Enoyl-CoA hydratase/isomerase family
SH08_RS15920	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
SH08_RS15920	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
SH08_RS15925	PF00108	Thiolase, N-terminal domain
SH08_RS15925	PF02803	Thiolase, C-terminal domain
SH08_RS15930	PF04175	Protein of unknown function (DUF406)
SH08_RS15935	PF03349	Outer membrane protein transport protein (OMPP1/FadL/TodX)
SH08_RS15945	PF04333	SH08_RS15945
SH08_RS15950	PF01226	Formate/nitrite transporter
SH08_RS15960	PF00589	Phage integrase family
SH08_RS15960	PF13356	Domain of unknown function (DUF4102)
SH08_RS15965	PF04138	SH08_RS15965
SH08_RS15970	PF00535	Glycosyl transferase family 2
SH08_RS15980	PF02413	SH08_RS15980
SH08_RS15985	PF02413	SH08_RS15985
SH08_RS15995	PF05869	SH08_RS15995
SH08_RS16000	PF06069	SH08_RS16000
SH08_RS16020	PF10065	SH08_RS16020
SH08_RS16045	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS16045	PF03466	LysR substrate binding domain
SH08_RS16050	PF02447	SH08_RS16050
SH08_RS16055	PF00291	Pyridoxal-phosphate dependent enzyme
SH08_RS16060	PF07690	Major Facilitator Superfamily
SH08_RS16065	PF00529	HlyD family secretion protein
SH08_RS16065	PF16576	SH08_RS16065
SH08_RS16070	PF00072	Response regulator receiver domain
SH08_RS16070	PF00196	Bacterial regulatory proteins, luxR family
SH08_RS16075	PF00072	Response regulator receiver domain
SH08_RS16075	PF00497	Bacterial extracellular solute-binding proteins, family 3
SH08_RS16075	PF00512	His Kinase A (phospho-acceptor) domain
SH08_RS16075	PF01627	Hpt domain
SH08_RS16075	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH08_RS16080	PF02515	CoA-transferase family III
SH08_RS16085	PF03547	SH08_RS16085
SH08_RS16090	PF00205	Thiamine pyrophosphate enzyme, central domain
SH08_RS16090	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
SH08_RS16090	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
SH08_RS16095	PF02515	CoA-transferase family III
SH08_RS16100	PF10938	YfdX protein
SH08_RS16115	PF10810	SH08_RS16115
SH08_RS16120	PF03279	SH08_RS16120
SH08_RS16125	PF00155	Aminotransferase class I and II
SH08_RS16130	PF01590	GAF domain
SH08_RS16130	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH08_RS16130	PF06580	SH08_RS16130
SH08_RS16130	PF07694	5TMR of 5TMR-LYT
SH08_RS16135	PF00072	Response regulator receiver domain
SH08_RS16135	PF04397	LytTr DNA-binding domain
SH08_RS16140	PF12833	Helix-turn-helix domain
SH08_RS16145	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
SH08_RS16145	PF00381	PTS HPr component phosphorylation site
SH08_RS16145	PF00391	PEP-utilising enzyme, mobile domain
SH08_RS16145	PF02896	PEP-utilising enzyme, TIM barrel domain
SH08_RS16145	PF05524	PEP-utilising enzyme, N-terminal
SH08_RS16150	PF05343	M42 glutamyl aminopeptidase
SH08_RS16155	PF00557	Metallopeptidase family M24
SH08_RS16155	PF01321	Creatinase/Prolidase N-terminal domain
SH08_RS16160	PF02378	Phosphotransferase system, EIIC
SH08_RS16165	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
SH08_RS16170	PF02685	Glucokinase
SH08_RS16175	PF00654	Voltage gated chloride channel
SH08_RS16180	PF10697	SH08_RS16180
SH08_RS16190	PF01566	SH08_RS16190
SH08_RS16195	PF01773	Na+ dependent nucleoside transporter N-terminus
SH08_RS16195	PF07662	Na+ dependent nucleoside transporter C-terminus
SH08_RS16195	PF07670	Nucleoside recognition
SH08_RS16200	PF01609	Transposase DDE domain
SH08_RS16205	PF00563	EAL domain
SH08_RS16205	PF05231	SH08_RS16205
SH08_RS16220	PF07037	SH08_RS16220
SH08_RS16225	PF07037	SH08_RS16225
SH08_RS16230	PF00749	tRNA synthetases class I (E and Q), catalytic domain
SH08_RS16255	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS16255	PF03466	LysR substrate binding domain
SH08_RS16265	PF03825	SH08_RS16265
SH08_RS16270	PF01048	Phosphorylase superfamily
SH08_RS16275	PF03502	Nucleoside-specific channel-forming protein, Tsx
SH08_RS16280	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS16280	PF03466	LysR substrate binding domain
SH08_RS16285	PF13593	SBF-like CPA transporter family (DUF4137)
SH08_RS16290	PF12843	SH08_RS16290
SH08_RS16295	PF00533	BRCA1 C Terminus (BRCT) domain
SH08_RS16295	PF01653	NAD-dependent DNA ligase adenylation domain
SH08_RS16295	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
SH08_RS16295	PF03120	NAD-dependent DNA ligase OB-fold domain
SH08_RS16295	PF12826	Helix-hairpin-helix motif
SH08_RS16295	PF14520	Helix-hairpin-helix domain
SH08_RS16300	PF04354	ZipA, C-terminal FtsZ-binding domain
SH08_RS16305	PF07264	Etoposide-induced protein 2
SH08_RS16310	PF00291	Pyridoxal-phosphate dependent enzyme
SH08_RS16315	PF00381	PTS HPr component phosphorylation site
SH08_RS16320	PF00391	PEP-utilising enzyme, mobile domain
SH08_RS16320	PF02896	PEP-utilising enzyme, TIM barrel domain
SH08_RS16320	PF05524	PEP-utilising enzyme, N-terminal
SH08_RS16325	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
SH08_RS16330	PF08543	Phosphomethylpyrimidine kinase
SH08_RS16340	PF05406	WGR domain
SH08_RS16345	PF00291	Pyridoxal-phosphate dependent enzyme
SH08_RS16350	PF00005	ABC transporter
SH08_RS16350	PF12857	SH08_RS16350
SH08_RS16355	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS16360	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS16365	PF13531	Bacterial extracellular solute-binding protein
SH08_RS16370	PF13561	Enoyl-(Acyl carrier protein) reductase
SH08_RS16375	PF01380	SIS domain
SH08_RS16375	PF01418	Helix-turn-helix domain, rpiR family
SH08_RS16380	PF01380	SIS domain
SH08_RS16385	PF00367	phosphotransferase system, EIIB
SH08_RS16385	PF02378	Phosphotransferase system, EIIC
SH08_RS16390	PF00144	Beta-lactamase
SH08_RS16395	PF04261	Dyp-type peroxidase family
SH08_RS16400	PF06572	Protein of unknown function (DUF1131)
SH08_RS16405	PF11143	SH08_RS16405
SH08_RS16410	PF00583	Acetyltransferase (GNAT) family
SH08_RS16415	PF01520	N-acetylmuramoyl-L-alanine amidase
SH08_RS16420	PF01218	Coproporphyrinogen III oxidase
SH08_RS16425	PF12833	Helix-turn-helix domain
SH08_RS16430	PF00936	BMC domain
SH08_RS16430	PF16365	SH08_RS16430
SH08_RS16435	PF00936	BMC domain
SH08_RS16440	PF05985	Ethanolamine ammonia-lyase light chain (EutC)
SH08_RS16445	PF06751	Ethanolamine ammonia lyase large subunit (EutB)
SH08_RS16450	PF06277	Ethanolamine utilisation protein EutA
SH08_RS16455	PF04346	SH08_RS16455
SH08_RS16460	PF00465	Iron-containing alcohol dehydrogenase
SH08_RS16465	PF14450	Cell division protein FtsA
SH08_RS16470	PF00171	Aldehyde dehydrogenase family
SH08_RS16475	PF03319	Ethanolamine utilisation protein EutN/carboxysome
SH08_RS16480	PF00936	BMC domain
SH08_RS16485	PF01515	Phosphate acetyl/butaryl transferase
SH08_RS16490	PF01923	Cobalamin adenosyltransferase
SH08_RS16495	PF06249	Ethanolamine utilisation protein EutQ
SH08_RS16500	PF10662	Ethanolamine utilisation - propanediol utilisation
SH08_RS16505	PF00936	BMC domain
SH08_RS16510	PF00390	Malic enzyme, N-terminal domain
SH08_RS16510	PF01515	Phosphate acetyl/butaryl transferase
SH08_RS16510	PF03949	Malic enzyme, NAD binding domain
SH08_RS16515	PF00923	Transaldolase
SH08_RS16520	PF00456	Transketolase, thiamine diphosphate binding domain
SH08_RS16520	PF02779	Transketolase, pyrimidine binding domain
SH08_RS16520	PF02780	Transketolase, C-terminal domain
SH08_RS16525	PF06674	SH08_RS16525
SH08_RS16530	PF00293	NUDIX domain
SH08_RS16535	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SH08_RS16535	PF13247	4Fe-4S dicluster domain
SH08_RS16535	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
SH08_RS16540	PF00672	HAMP domain
SH08_RS16540	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH08_RS16540	PF07730	Histidine kinase
SH08_RS16540	PF13675	Type IV pili methyl-accepting chemotaxis transducer N-term
SH08_RS16545	PF00873	AcrB/AcrD/AcrF family
SH08_RS16555	PF03960	ArsC family
SH08_RS16560	PF01546	Peptidase family M20/M25/M40
SH08_RS16560	PF07687	Peptidase dimerisation domain
SH08_RS16565	PF13980	SH08_RS16565
SH08_RS16570	PF02230	Phospholipase/Carboxylesterase
SH08_RS16575	PF05127	Helicase
SH08_RS16575	PF08351	Domain of unknown function (DUF1726)
SH08_RS16575	PF13718	GNAT acetyltransferase 2
SH08_RS16575	PF17176	SH08_RS16575
SH08_RS16580	PF04228	SH08_RS16580
SH08_RS16585	PF01259	SAICAR synthetase
SH08_RS16595	PF06804	NlpB/DapX lipoprotein
SH08_RS16600	PF00701	Dihydrodipicolinate synthetase family
SH08_RS16605	PF01842	ACT domain
SH08_RS16605	PF13740	ACT domain
SH08_RS16610	PF00578	AhpC/TSA family
SH08_RS16615	PF00037	4Fe-4S binding domain
SH08_RS16615	PF12798	4Fe-4S binding domain
SH08_RS16620	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
SH08_RS16625	PF00146	NADH dehydrogenase
SH08_RS16630	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
SH08_RS16630	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
SH08_RS16635	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
SH08_RS16640	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
SH08_RS16640	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
SH08_RS16645	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
SH08_RS16645	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
SH08_RS16645	PF00374	Nickel-dependent hydrogenase
SH08_RS16650	PF12838	4Fe-4S dicluster domain
SH08_RS16655	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
SH08_RS16660	PF07450	SH08_RS16660
SH08_RS16665	PF00158	Sigma-54 interaction domain
SH08_RS16665	PF02954	Bacterial regulatory protein, Fis family
SH08_RS16665	PF13185	GAF domain
SH08_RS16670	PF01226	Formate/nitrite transporter
SH08_RS16675	PF01594	SH08_RS16675
SH08_RS16680	PF01435	Peptidase family M48
SH08_RS16680	PF14559	Tetratricopeptide repeat
SH08_RS16685	PF03960	ArsC family
SH08_RS16690	PF00308	Bacterial dnaA  protein
SH08_RS16695	PF00860	Permease family
SH08_RS16700	PF14681	Uracil phosphoribosyltransferase
SH08_RS16705	PF00586	AIR synthase related protein, N-terminal domain
SH08_RS16705	PF02769	AIR synthase related protein, C-terminal domain
SH08_RS16710	PF00551	Formyl transferase
SH08_RS16715	PF02503	Polyphosphate kinase middle domain
SH08_RS16715	PF13089	Polyphosphate kinase N-terminal domain
SH08_RS16715	PF13090	Polyphosphate kinase C-terminal domain
SH08_RS16720	PF02541	Ppx/GppA phosphatase family
SH08_RS16725	PF00563	EAL domain
SH08_RS16725	PF05231	SH08_RS16725
SH08_RS16735	PF11119	SH08_RS16735
SH08_RS16740	PF05433	SH08_RS16740
SH08_RS16750	PF00117	Glutamine amidotransferase class-I
SH08_RS16750	PF00958	GMP synthase C terminal domain
SH08_RS16750	PF02540	NAD synthase
SH08_RS16755	PF00478	IMP dehydrogenase / GMP reductase domain
SH08_RS16755	PF00571	CBS domain
SH08_RS16760	PF02601	SH08_RS16760
SH08_RS16760	PF13742	SH08_RS16760
SH08_RS16765	PF07191	zinc-ribbons
SH08_RS16770	PF01926	50S ribosome-binding GTPase
SH08_RS16770	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
SH08_RS16775	PF13360	PQQ-like domain
SH08_RS16780	PF09976	Tetratricopeptide repeat
SH08_RS16785	PF03129	Anticodon binding domain
SH08_RS16785	PF13393	Histidyl-tRNA synthetase
SH08_RS16790	PF04551	GcpE protein
SH08_RS16795	PF13413	Helix-turn-helix domain
SH08_RS16795	PF13464	SH08_RS16795
SH08_RS16800	PF04055	Radical SAM superfamily
SH08_RS16805	PF00334	Nucleoside diphosphate kinase
SH08_RS16810	PF00905	Penicillin binding protein transpeptidase domain
SH08_RS16810	PF00912	Transglycosylase
SH08_RS16810	PF06832	SH08_RS16810
SH08_RS16815	PF00207	Alpha-2-macroglobulin family
SH08_RS16815	PF01835	MG2 domain
SH08_RS16815	PF07703	Alpha-2-macroglobulin family N-terminal region
SH08_RS16815	PF11974	Alpha-2-macroglobulin MG1 domain
SH08_RS16820	PF00581	Rhodanese-like domain
SH08_RS16825	PF07179	SH08_RS16825
SH08_RS16825	PF14581	SH08_RS16825
SH08_RS16830	PF00883	Cytosol aminopeptidase family, catalytic domain
SH08_RS16830	PF12404	SH08_RS16830
SH08_RS16835	PF04384	Iron-sulphur cluster assembly
SH08_RS16840	PF00111	2Fe-2S iron-sulfur cluster binding domain
SH08_RS16845	PF00012	Hsp70 protein
SH08_RS16850	PF07743	HSCB C-terminal oligomerisation domain
SH08_RS16855	PF01521	Iron-sulphur cluster biosynthesis
SH08_RS16860	PF01592	NifU-like N terminal domain
SH08_RS16865	PF00266	Aminotransferase class-V
SH08_RS16870	PF02082	Transcriptional regulator
SH08_RS16875	PF00588	SpoU rRNA Methylase family
SH08_RS16880	PF00459	Inositol monophosphatase family
SH08_RS16885	PF12146	Putative lysophospholipase
SH08_RS16890	PF00874	PRD domain
SH08_RS16895	PF12832	MFS_1 like family
SH08_RS16900	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS16900	PF03466	LysR substrate binding domain
SH08_RS16905	PF00355	Rieske [2Fe-2S] domain
SH08_RS16905	PF00848	Ring hydroxylating alpha subunit (catalytic domain)
SH08_RS16910	PF00866	Ring hydroxylating beta subunit
SH08_RS16915	PF00355	Rieske [2Fe-2S] domain
SH08_RS16920	PF00106	short chain dehydrogenase
SH08_RS16925	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SH08_RS16925	PF14759	Reductase C-terminal
SH08_RS16930	PF07681	SH08_RS16930
SH08_RS16935	PF01263	Aldose 1-epimerase
SH08_RS16940	PF00107	Zinc-binding dehydrogenase
SH08_RS16940	PF08240	Alcohol dehydrogenase GroES-like domain
SH08_RS16945	PF02653	SH08_RS16945
SH08_RS16950	PF00005	ABC transporter
SH08_RS16955	PF13407	Periplasmic binding protein domain
SH08_RS16960	PF13181	Tetratricopeptide repeat
SH08_RS16960	PF13432	Tetratricopeptide repeat
SH08_RS16960	PF17128	SH08_RS16960
SH08_RS16965	PF00480	ROK family
SH08_RS16970	PF00464	Serine hydroxymethyltransferase
SH08_RS16975	PF00042	Globin
SH08_RS16975	PF00175	Oxidoreductase NAD-binding domain
SH08_RS16975	PF00970	Oxidoreductase FAD-binding domain
SH08_RS16980	PF00543	Nitrogen regulatory protein P-II
SH08_RS16985	PF00072	Response regulator receiver domain
SH08_RS16985	PF00158	Sigma-54 interaction domain
SH08_RS16990	PF13942	SH08_RS16990
SH08_RS16995	PF00512	His Kinase A (phospho-acceptor) domain
SH08_RS16995	PF00672	HAMP domain
SH08_RS16995	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH08_RS17000	PF02769	AIR synthase related protein, C-terminal domain
SH08_RS17000	PF13507	CobB/CobQ-like glutamine amidotransferase domain
SH08_RS17005	PF00497	Bacterial extracellular solute-binding proteins, family 3
SH08_RS17005	PF01464	Transglycosylase SLT domain
SH08_RS17010	PF14437	SH08_RS17010
SH08_RS17015	PF12710	haloacid dehalogenase-like hydrolase
SH08_RS17020	PF01380	SIS domain
SH08_RS17020	PF01418	Helix-turn-helix domain, rpiR family
SH08_RS17025	PF00037	4Fe-4S binding domain
SH08_RS17045	PF01648	4'-phosphopantetheinyl transferase superfamily
SH08_RS17050	PF03740	Pyridoxal phosphate biosynthesis protein PdxJ
SH08_RS17055	PF02565	Recombination protein O C terminal
SH08_RS17055	PF11967	Recombination protein O N terminal
SH08_RS17060	PF01926	50S ribosome-binding GTPase
SH08_RS17060	PF07650	KH domain
SH08_RS17065	PF00035	Double-stranded RNA binding motif
SH08_RS17065	PF14622	Ribonuclease-III-like
SH08_RS17070	PF00717	Peptidase S24-like
SH08_RS17070	PF10502	Signal peptidase, peptidase S26
SH08_RS17075	PF00009	Elongation factor Tu GTP binding domain
SH08_RS17075	PF00679	Elongation factor G C-terminus
SH08_RS17075	PF03144	Elongation factor Tu domain 2
SH08_RS17075	PF06421	GTP-binding protein LepA C-terminus
SH08_RS17080	PF04246	SH08_RS17080
SH08_RS17085	PF03888	MucB/RseB family
SH08_RS17085	PF17188	SH08_RS17085
SH08_RS17090	PF03872	Anti sigma-E protein RseA, N-terminal domain
SH08_RS17090	PF03873	Anti sigma-E protein RseA, C-terminal domain
SH08_RS17095	PF04542	Sigma-70 region 2
SH08_RS17095	PF08281	Sigma-70, region 4
SH08_RS17105	PF00890	FAD binding domain
SH08_RS17105	PF02910	Fumarate reductase flavoprotein C-term
SH08_RS17110	PF05175	Methyltransferase small domain
SH08_RS17115	PF00270	DEAD/DEAH box helicase
SH08_RS17115	PF00271	Helicase conserved C-terminal domain
SH08_RS17120	PF12035	SH08_RS17120
SH08_RS17125	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS17125	PF03466	LysR substrate binding domain
SH08_RS17130	PF01810	SH08_RS17130
SH08_RS17135	PF01228	Glycine radical
SH08_RS17140	PF03167	Uracil DNA glycosylase superfamily
SH08_RS17145	PF00588	SpoU rRNA Methylase family
SH08_RS17145	PF08032	RNA 2'-O ribose methyltransferase substrate binding
SH08_RS17155	PF00085	Thioredoxin
SH08_RS17160	PF03942	SH08_RS17160
SH08_RS17165	PF00583	Acetyltransferase (GNAT) family
SH08_RS17165	PF13380	CoA binding domain
SH08_RS17165	PF13549	ATP-grasp domain
SH08_RS17165	PF13607	Succinyl-CoA ligase like flavodoxin domain
SH08_RS17170	PF13091	PLD-like domain
SH08_RS17175	PF10043	SH08_RS17175
SH08_RS17180	PF00083	Sugar (and other) transporter
SH08_RS17210	PF00004	ATPase family associated with various cellular activities (AAA)
SH08_RS17210	PF02861	Clp amino terminal domain
SH08_RS17210	PF07724	AAA domain (Cdc48 subfamily)
SH08_RS17210	PF10431	C-terminal, D2-small domain, of ClpB protein
SH08_RS17215	PF02578	Multi-copper polyphenol oxidoreductase laccase
SH08_RS17220	PF00849	RNA pseudouridylate synthase
SH08_RS17220	PF01479	S4 domain
SH08_RS17225	PF13525	Outer membrane lipoprotein
SH08_RS17235	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
SH08_RS17240	PF00800	Prephenate dehydratase
SH08_RS17240	PF01817	Chorismate mutase type II
SH08_RS17245	PF01817	Chorismate mutase type II
SH08_RS17245	PF02153	Prephenate dehydrogenase
SH08_RS17250	PF00793	DAHP synthetase I family
SH08_RS17255	PF10973	SH08_RS17255
SH08_RS17260	PF13689	SH08_RS17260
SH08_RS17265	PF00990	GGDEF domain
SH08_RS17265	PF17152	SH08_RS17265
SH08_RS17270	PF00691	OmpA family
SH08_RS17275	PF01245	Ribosomal protein L19
SH08_RS17280	PF01746	tRNA (Guanine-1)-methyltransferase
SH08_RS17285	PF01782	RimM N-terminal domain
SH08_RS17285	PF05239	PRC-barrel domain
SH08_RS17290	PF00886	Ribosomal protein S16
SH08_RS17295	PF00448	SRP54-type protein, GTPase domain
SH08_RS17295	PF02881	SRP54-type protein, helical bundle domain
SH08_RS17295	PF02978	Signal peptide binding domain
SH08_RS17300	PF01578	SH08_RS17300
SH08_RS17305	PF00571	CBS domain
SH08_RS17305	PF01595	SH08_RS17305
SH08_RS17305	PF03471	Transporter associated domain
SH08_RS17310	PF01025	GrpE
SH08_RS17320	PF01513	ATP-NAD kinase
SH08_RS17325	PF02463	RecF/RecN/SMC N terminal domain
SH08_RS17330	PF04355	SmpA / OmlA family
SH08_RS17335	PF03658	RnfH family Ubiquitin
SH08_RS17340	PF03364	Polyketide cyclase / dehydrase and lipid transport
SH08_RS17345	PF01668	SmpB protein
SH08_RS17350	PF00589	Phage integrase family
SH08_RS17350	PF13356	Domain of unknown function (DUF4102)
SH08_RS17360	PF05930	Prophage CP4-57 regulatory protein (AlpA)
SH08_RS17365	PF13148	SH08_RS17365
SH08_RS17370	PF11726	SH08_RS17370
SH08_RS17375	PF00271	Helicase conserved C-terminal domain
SH08_RS17380	PF08878	SH08_RS17380
SH08_RS17380	PF14130	SH08_RS17380
SH08_RS17385	PF07510	SH08_RS17385
SH08_RS17390	PF15935	SH08_RS17390
SH08_RS17395	PF15933	SH08_RS17395
SH08_RS17400	PF01926	50S ribosome-binding GTPase
SH08_RS17405	PF06067	SH08_RS17405
SH08_RS17410	PF08220	DeoR-like helix-turn-helix domain
SH08_RS17410	PF13280	SH08_RS17410
SH08_RS17445	PF03230	Antirestriction protein
SH08_RS17450	PF04002	RadC-like JAB domain
SH08_RS17455	PF06154	YagB/YeeU/YfjZ family
SH08_RS17460	PF06755	SH08_RS17460
SH08_RS17500	PF00128	Alpha amylase, catalytic domain
SH08_RS17505	PF00128	Alpha amylase, catalytic domain
SH08_RS17510	PF02806	Alpha amylase, C-terminal all-beta domain
SH08_RS17515	PF08943	CsiD
SH08_RS17520	PF01266	FAD dependent oxidoreductase
SH08_RS17525	PF00171	Aldehyde dehydrogenase family
SH08_RS17530	PF00202	Aminotransferase class-III
SH08_RS17535	PF00324	Amino acid permease
SH08_RS17540	PF00392	Bacterial regulatory proteins, gntR family
SH08_RS17540	PF07729	FCD domain
SH08_RS17545	PF01476	LysM domain
SH08_RS17545	PF04972	BON domain
SH08_RS17550	PF01679	SH08_RS17550
SH08_RS17555	PF01022	Bacterial regulatory protein, arsR family
SH08_RS17560	PF00581	Rhodanese-like domain
SH08_RS17560	PF11127	Protein of unknown function (DUF2892)
SH08_RS17565	PF00816	H-NS histone family
SH08_RS17570	PF06610	SH08_RS17570
SH08_RS17575	PF09400	Protein of unknown function (DUF2002)
SH08_RS17580	PF05957	SH08_RS17580
SH08_RS17585	PF00462	Glutaredoxin
SH08_RS17590	PF07972	NrdI Flavodoxin like
SH08_RS17595	PF00317	Ribonucleotide reductase, all-alpha domain
SH08_RS17595	PF02867	Ribonucleotide reductase, barrel domain
SH08_RS17595	PF08343	Ribonucleotide reductase N-terminal
SH08_RS17600	PF00268	Ribonucleotide reductase, small chain
SH08_RS17605	PF00005	ABC transporter
SH08_RS17605	PF00571	CBS domain
SH08_RS17610	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS17615	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
SH08_RS17625	PF03591	SH08_RS17625
SH08_RS17630	PF05437	SH08_RS17630
SH08_RS17635	PF01047	MarR family
SH08_RS17640	PF00529	HlyD family secretion protein
SH08_RS17640	PF16576	SH08_RS17640
SH08_RS17645	PF07690	Major Facilitator Superfamily
SH08_RS17650	PF02664	S-Ribosylhomocysteinase (LuxS)
SH08_RS17655	PF04262	Glutamate-cysteine ligase
SH08_RS17660	PF09335	SH08_RS17660
SH08_RS17665	PF13419	Haloacid dehalogenase-like hydrolase
SH08_RS17700	PF02599	Global regulator protein family
SH08_RS17705	PF01411	tRNA synthetases class II (A)
SH08_RS17705	PF02272	DHHA1 domain
SH08_RS17705	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
SH08_RS17715	PF02631	RecX family
SH08_RS17730	PF00302	Chloramphenicol acetyltransferase
SH08_RS17735	PF02464	Competence-damaged protein
SH08_RS17740	PF13406	Transglycosylase SLT domain
SH08_RS17745	PF03608	SH08_RS17745
SH08_RS17750	PF03612	SH08_RS17750
SH08_RS17750	PF07663	SH08_RS17750
SH08_RS17755	PF03829	PTS system glucitol/sorbitol-specific IIA component
SH08_RS17760	PF00106	short chain dehydrogenase
SH08_RS17765	PF06923	SH08_RS17765
SH08_RS17770	PF00455	SH08_RS17770
SH08_RS17770	PF08220	DeoR-like helix-turn-helix domain
SH08_RS17775	PF00571	CBS domain
SH08_RS17775	PF01380	SIS domain
SH08_RS17780	PF00158	Sigma-54 interaction domain
SH08_RS17780	PF01590	GAF domain
SH08_RS17785	PF00258	Flavodoxin
SH08_RS17785	PF00301	Rubredoxin
SH08_RS17785	PF00753	Metallo-beta-lactamase superfamily
SH08_RS17790	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SH08_RS17795	PF00708	Acylphosphatase
SH08_RS17795	PF01300	Telomere recombination
SH08_RS17795	PF07503	HypF finger
SH08_RS17800	PF12798	4Fe-4S binding domain
SH08_RS17800	PF12800	4Fe-4S binding domain
SH08_RS17800	PF13247	4Fe-4S dicluster domain
SH08_RS17805	PF00356	Bacterial regulatory proteins, lacI family
SH08_RS17805	PF13377	Periplasmic binding protein-like domain
SH08_RS17810	PF00367	phosphotransferase system, EIIB
SH08_RS17810	PF02378	Phosphotransferase system, EIIC
SH08_RS17815	PF00232	Glycosyl hydrolase family 1
SH08_RS17820	PF01750	Hydrogenase maturation protease
SH08_RS17825	PF07450	SH08_RS17825
SH08_RS17830	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
SH08_RS17835	PF12838	4Fe-4S dicluster domain
SH08_RS17840	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
SH08_RS17840	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
SH08_RS17840	PF00374	Nickel-dependent hydrogenase
SH08_RS17845	PF00146	NADH dehydrogenase
SH08_RS17850	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
SH08_RS17855	PF13247	4Fe-4S dicluster domain
SH08_RS17865	PF11046	SH08_RS17865
SH08_RS17870	PF01155	Hydrogenase expression/synthesis hypA family
SH08_RS17875	PF02492	CobW/HypB/UreG, nucleotide-binding domain
SH08_RS17880	PF01455	HupF/HypC family
SH08_RS17885	PF01924	Hydrogenase formation hypA family
SH08_RS17890	PF00586	AIR synthase related protein, N-terminal domain
SH08_RS17890	PF02769	AIR synthase related protein, C-terminal domain
SH08_RS17895	PF00158	Sigma-54 interaction domain
SH08_RS17895	PF01590	GAF domain
SH08_RS17895	PF02954	Bacterial regulatory protein, Fis family
SH08_RS17900	PF11756	SH08_RS17900
SH08_RS17905	PF00488	MutS domain V
SH08_RS17905	PF01624	MutS domain I
SH08_RS17905	PF05188	MutS domain II
SH08_RS17905	PF05190	MutS family domain IV
SH08_RS17905	PF05192	MutS domain III
SH08_RS17910	PF00149	Calcineurin-like phosphoesterase
SH08_RS17915	PF00455	SH08_RS17915
SH08_RS17915	PF08220	DeoR-like helix-turn-helix domain
SH08_RS17920	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
SH08_RS17920	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
SH08_RS17925	PF07005	Protein of unknown function, DUF1537
SH08_RS17925	PF17042	SH08_RS17925
SH08_RS17930	PF00596	Class II Aldolase and Adducin N-terminal domain
SH08_RS17935	PF01261	Xylose isomerase-like TIM barrel
SH08_RS17940	PF02447	SH08_RS17940
SH08_RS17945	PF00140	Sigma-70 factor, region 1
SH08_RS17945	PF04539	Sigma-70 region 3
SH08_RS17945	PF04542	Sigma-70 region 2
SH08_RS17945	PF04545	Sigma-70, region 4
SH08_RS17950	PF01476	LysM domain
SH08_RS17950	PF01551	Peptidase family M23
SH08_RS17955	PF01135	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
SH08_RS17960	PF01975	Survival protein SurE
SH08_RS17965	PF01142	tRNA pseudouridine synthase D (TruD)
SH08_RS17970	PF02542	YgbB family
SH08_RS17980	PF04977	Septum formation initiator
SH08_RS17985	PF12084	SH08_RS17985
SH08_RS17990	PF01583	Adenylylsulphate kinase
SH08_RS17995	PF00009	Elongation factor Tu GTP binding domain
SH08_RS18000	PF01507	Phosphoadenosine phosphosulfate reductase family
SH08_RS18005	PF04389	Peptidase family M28
SH08_RS18010	PF09707	CRISPR-associated protein (Cas_Cas2CT1978)
SH08_RS18015	PF01867	CRISPR associated protein Cas1
SH08_RS18020	PF08798	CRISPR associated protein
SH08_RS18025	PF09704	CRISPR-associated protein (Cas_Cas5)
SH08_RS18030	PF09344	CT1975-like protein
SH08_RS18035	PF09485	CRISPR-associated protein Cse2 (CRISPR_cse2)
SH08_RS18040	PF09481	CRISPR-associated protein Cse1 (CRISPR_cse1)
SH08_RS18045	PF00270	DEAD/DEAH box helicase
SH08_RS18045	PF00271	Helicase conserved C-terminal domain
SH08_RS18050	PF01507	Phosphoadenosine phosphosulfate reductase family
SH08_RS18055	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
SH08_RS18055	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
SH08_RS18060	PF00175	Oxidoreductase NAD-binding domain
SH08_RS18060	PF00258	Flavodoxin
SH08_RS18060	PF00667	FAD binding domain
SH08_RS18065	PF01242	6-pyruvoyl tetrahydropterin synthase
SH08_RS18070	PF12831	FAD dependent oxidoreductase
SH08_RS18080	PF04309	Glycerol-3-phosphate responsive antiterminator
SH08_RS18085	PF00766	Electron transfer flavoprotein FAD-binding domain
SH08_RS18085	PF01012	Electron transfer flavoprotein domain
SH08_RS18090	PF01012	Electron transfer flavoprotein domain
SH08_RS18095	PF00083	Sugar (and other) transporter
SH08_RS18100	PF01565	FAD binding domain
SH08_RS18100	PF02913	FAD linked oxidases, C-terminal domain
SH08_RS18105	PF13561	Enoyl-(Acyl carrier protein) reductase
SH08_RS18110	PF07690	Major Facilitator Superfamily
SH08_RS18115	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
SH08_RS18115	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
SH08_RS18120	PF04055	Radical SAM superfamily
SH08_RS18120	PF13394	4Fe-4S single cluster domain
SH08_RS18130	PF04536	TLP18
SH08_RS18135	PF00113	Enolase, C-terminal TIM barrel domain
SH08_RS18135	PF03952	Enolase, N-terminal domain
SH08_RS18140	PF00117	Glutamine amidotransferase class-I
SH08_RS18140	PF06418	CTP synthase N-terminus
SH08_RS18145	PF03819	MazG nucleotide pyrophosphohydrolase domain
SH08_RS18150	PF02452	PemK-like protein
SH08_RS18155	PF04014	Antidote-toxin recognition MazE
SH08_RS18160	PF02824	TGS domain
SH08_RS18160	PF04607	Region found in RelA / SpoT proteins
SH08_RS18160	PF13291	ACT domain
SH08_RS18160	PF13328	HD domain
SH08_RS18165	PF01938	TRAM domain
SH08_RS18165	PF05958	tRNA (Uracil-5-)-methyltransferase
SH08_RS18170	PF00072	Response regulator receiver domain
SH08_RS18170	PF00512	His Kinase A (phospho-acceptor) domain
SH08_RS18170	PF00672	HAMP domain
SH08_RS18170	PF01627	Hpt domain
SH08_RS18170	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH08_RS18170	PF09984	SH08_RS18170
SH08_RS18175	PF13378	Enolase C-terminal domain-like
SH08_RS18180	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
SH08_RS18180	PF13378	Enolase C-terminal domain-like
SH08_RS18185	PF07690	Major Facilitator Superfamily
SH08_RS18190	PF00258	Flavodoxin
SH08_RS18195	PF00849	RNA pseudouridylate synthase
SH08_RS18200	PF04287	tRNA pseudouridine synthase C
SH08_RS18210	PF07348	Syd protein (SUKH-2)
SH08_RS18215	PF14489	QueF-like protein
SH08_RS18215	PF14819	Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term
SH08_RS18220	PF03641	Possible lysine decarboxylase
SH08_RS18220	PF11892	Domain of unknown function (DUF3412)
SH08_RS18220	PF14793	Domain of unknown function (DUF4478)
SH08_RS18230	PF03313	SH08_RS18230
SH08_RS18230	PF03315	Serine dehydratase beta chain
SH08_RS18235	PF01367	5'-3' exonuclease, C-terminal SAM fold
SH08_RS18235	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
SH08_RS18240	PF00465	Iron-containing alcohol dehydrogenase
SH08_RS18245	PF00596	Class II Aldolase and Adducin N-terminal domain
SH08_RS18250	PF07690	Major Facilitator Superfamily
SH08_RS18255	PF02952	L-fucose isomerase, C-terminal domain
SH08_RS18255	PF07881	L-fucose isomerase, first N-terminal domain
SH08_RS18255	PF07882	L-fucose isomerase, second N-terminal domain
SH08_RS18260	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
SH08_RS18260	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
SH08_RS18265	PF05025	RbsD / FucU transport protein family
SH08_RS18270	PF00455	SH08_RS18270
SH08_RS18270	PF08220	DeoR-like helix-turn-helix domain
SH08_RS18275	PF01728	FtsJ-like methyltransferase
SH08_RS18280	PF04241	SH08_RS18280
SH08_RS18285	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS18285	PF03466	LysR substrate binding domain
SH08_RS18290	PF06004	Bacterial protein of unknown function (DUF903)
SH08_RS18295	PF00266	Aminotransferase class-V
SH08_RS18300	PF02657	Fe-S metabolism associated domain
SH08_RS18305	PF00899	ThiF family
SH08_RS18310	PF03562	MltA specific insert domain
SH08_RS18310	PF06725	3D domain
SH08_RS18330	PF01520	N-acetylmuramoyl-L-alanine amidase
SH08_RS18330	PF11741	AMIN domain
SH08_RS18335	PF00583	Acetyltransferase (GNAT) family
SH08_RS18335	PF00696	Amino acid kinase family
SH08_RS18345	PF00580	UvrD/REP helicase N-terminal domain
SH08_RS18345	PF12705	PD-(D/E)XK nuclease superfamily
SH08_RS18345	PF13361	UvrD-like helicase C-terminal domain
SH08_RS18350	PF00675	Insulinase (Peptidase family M16)
SH08_RS18350	PF05193	Peptidase M16 inactive domain
SH08_RS18350	PF16187	SH08_RS18350
SH08_RS18355	PF04257	Exodeoxyribonuclease V, gamma subunit
SH08_RS18360	PF12528	SH08_RS18360
SH08_RS18360	PF13544	SH08_RS18360
SH08_RS18365	PF10713	SH08_RS18365
SH08_RS18370	PF13633	Prokaryotic N-terminal methylation site
SH08_RS18375	PF13544	SH08_RS18375
SH08_RS18380	PF00303	Thymidylate synthase
SH08_RS18385	PF01790	SH08_RS18385
SH08_RS18390	PF00391	PEP-utilising enzyme, mobile domain
SH08_RS18390	PF01590	GAF domain
SH08_RS18390	PF02896	PEP-utilising enzyme, TIM barrel domain
SH08_RS18390	PF05524	PEP-utilising enzyme, N-terminal
SH08_RS18395	PF00293	NUDIX domain
SH08_RS18410	PF02976	DNA mismatch repair enzyme MutH
SH08_RS18415	PF03741	SH08_RS18415
SH08_RS18420	PF06004	Bacterial protein of unknown function (DUF903)
SH08_RS18425	PF00248	Aldo/keto reductase family
SH08_RS18430	PF07690	Major Facilitator Superfamily
SH08_RS18435	PF00501	AMP-binding enzyme
SH08_RS18435	PF01553	Acyltransferase
SH08_RS18440	PF00356	Bacterial regulatory proteins, lacI family
SH08_RS18440	PF13377	Periplasmic binding protein-like domain
SH08_RS18445	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
SH08_RS18445	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
SH08_RS18450	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS18450	PF03466	LysR substrate binding domain
SH08_RS18455	PF01177	Asp/Glu/Hydantoin racemase
SH08_RS18460	PF00083	Sugar (and other) transporter
SH08_RS18465	PF13561	Enoyl-(Acyl carrier protein) reductase
SH08_RS18470	PF04962	KduI/IolB family
SH08_RS18475	PF00108	Thiolase, N-terminal domain
SH08_RS18475	PF02803	Thiolase, C-terminal domain
SH08_RS18480	PF03222	Tryptophan/tyrosine permease family
SH08_RS18485	PF00196	Bacterial regulatory proteins, luxR family
SH08_RS18490	PF00486	Transcriptional regulatory protein, C terminal
SH08_RS18510	PF07720	Tetratricopeptide repeat
SH08_RS18515	PF00486	Transcriptional regulatory protein, C terminal
SH08_RS18525	PF01464	Transglycosylase SLT domain
SH08_RS18530	PF00196	Bacterial regulatory proteins, luxR family
SH08_RS18555	PF00665	Integrase core domain
SH08_RS18555	PF13276	SH08_RS18555
SH08_RS18560	PF01527	Transposase
SH08_RS18580	PF01476	LysM domain
SH08_RS18580	PF01551	Peptidase family M23
SH08_RS18585	PF01315	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
SH08_RS18585	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
SH08_RS18590	PF00941	FAD binding domain in molybdopterin dehydrogenase
SH08_RS18590	PF03450	CO dehydrogenase flavoprotein C-terminal domain
SH08_RS18595	PF00111	2Fe-2S iron-sulfur cluster binding domain
SH08_RS18595	PF01799	[2Fe-2S] binding domain
SH08_RS18600	PF00158	Sigma-54 interaction domain
SH08_RS18600	PF02954	Bacterial regulatory protein, Fis family
SH08_RS18600	PF13188	PAS domain
SH08_RS18605	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
SH08_RS18605	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
SH08_RS18610	PF00291	Pyridoxal-phosphate dependent enzyme
SH08_RS18615	PF01546	Peptidase family M20/M25/M40
SH08_RS18615	PF07687	Peptidase dimerisation domain
SH08_RS18620	PF01979	Amidohydrolase family
SH08_RS18625	PF00696	Amino acid kinase family
SH08_RS18630	PF02625	XdhC and CoxI family
SH08_RS18630	PF13478	XdhC Rossmann domain
SH08_RS18640	PF12804	MobA-like NTP transferase domain
SH08_RS18645	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SH08_RS18645	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
SH08_RS18650	PF01979	Amidohydrolase family
SH08_RS18655	PF00941	FAD binding domain in molybdopterin dehydrogenase
SH08_RS18655	PF03450	CO dehydrogenase flavoprotein C-terminal domain
SH08_RS18660	PF01315	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
SH08_RS18660	PF01799	[2Fe-2S] binding domain
SH08_RS18660	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
SH08_RS18665	PF00860	Permease family
SH08_RS18670	PF01979	Amidohydrolase family
SH08_RS18675	PF00860	Permease family
SH08_RS18680	PF13247	4Fe-4S dicluster domain
SH08_RS18685	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SH08_RS18685	PF13247	4Fe-4S dicluster domain
SH08_RS18685	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
SH08_RS18695	PF00860	Permease family
SH08_RS18705	PF00293	NUDIX domain
SH08_RS18710	PF00152	tRNA synthetases class II (D, K and N)
SH08_RS18710	PF01336	OB-fold nucleic acid binding domain
SH08_RS18715	PF00472	RF-1 domain
SH08_RS18715	PF03462	PCRF domain
SH08_RS18720	PF01368	DHH family
SH08_RS18720	PF02272	DHHA1 domain
SH08_RS18725	PF10411	Disulfide bond isomerase protein N-terminus
SH08_RS18725	PF13098	Thioredoxin-like domain
SH08_RS18730	PF00589	Phage integrase family
SH08_RS18730	PF02899	Phage integrase, N-terminal SAM-like domain
SH08_RS18735	PF00258	Flavodoxin
SH08_RS18740	PF07254	SH08_RS18740
SH08_RS18745	PF03937	Flavinator of succinate dehydrogenase
SH08_RS18750	PF01571	Aminomethyltransferase folate-binding domain
SH08_RS18755	PF03006	SH08_RS18755
SH08_RS18760	PF04266	ASCH domain
SH08_RS18765	PF00232	Glycosyl hydrolase family 1
SH08_RS18770	PF13561	Enoyl-(Acyl carrier protein) reductase
SH08_RS18775	PF02347	Glycine cleavage system P-protein
SH08_RS18780	PF01597	Glycine cleavage H-protein
SH08_RS18785	PF01571	Aminomethyltransferase folate-binding domain
SH08_RS18785	PF08669	Glycine cleavage T-protein C-terminal barrel domain
SH08_RS18790	PF01494	FAD binding domain
SH08_RS18795	PF01494	FAD binding domain
SH08_RS18800	PF00557	Metallopeptidase family M24
SH08_RS18800	PF05195	Aminopeptidase P, N-terminal domain
SH08_RS18805	PF03695	Uncharacterised protein family (UPF0149)
SH08_RS18810	PF05164	Cell division protein ZapA
SH08_RS18815	PF01812	5-formyltetrahydrofolate cyclo-ligase family
SH08_RS18820	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
SH08_RS18820	PF01842	ACT domain
SH08_RS18820	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
SH08_RS18825	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
SH08_RS18830	PF03466	LysR substrate binding domain
SH08_RS18835	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS18835	PF03466	LysR substrate binding domain
SH08_RS18840	PF01642	Methylmalonyl-CoA mutase
SH08_RS18840	PF02310	B12 binding domain
SH08_RS18850	PF00378	Enoyl-CoA hydratase/isomerase family
SH08_RS18855	PF02550	Acetyl-CoA hydrolase/transferase N-terminal domain
SH08_RS18855	PF13336	Acetyl-CoA hydrolase/transferase C-terminal domain
SH08_RS18860	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS18860	PF03466	LysR substrate binding domain
SH08_RS18865	PF04402	Protein of unknown function (DUF541)
SH08_RS18870	PF01810	SH08_RS18870
SH08_RS18875	PF00924	Mechanosensitive ion channel
SH08_RS18875	PF05552	Conserved TM helix
SH08_RS18880	PF01116	Fructose-bisphosphate aldolase class-II
SH08_RS18885	PF00162	Phosphoglycerate kinase
SH08_RS18890	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SH08_RS18890	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
SH08_RS18900	PF05068	Mannitol repressor
SH08_RS18905	PF03320	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
SH08_RS18910	PF00107	Zinc-binding dehydrogenase
SH08_RS18910	PF08240	Alcohol dehydrogenase GroES-like domain
SH08_RS18915	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
SH08_RS18915	PF02378	Phosphotransferase system, EIIC
SH08_RS18920	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
SH08_RS18925	PF00456	Transketolase, thiamine diphosphate binding domain
SH08_RS18925	PF02779	Transketolase, pyrimidine binding domain
SH08_RS18925	PF02780	Transketolase, C-terminal domain
SH08_RS18930	PF01435	Peptidase family M48
SH08_RS18935	PF00491	Arginase family
SH08_RS18940	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
SH08_RS18940	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
SH08_RS18945	PF11036	SH08_RS18945
SH08_RS18955	PF10885	SH08_RS18955
SH08_RS18960	PF00438	S-adenosylmethionine synthetase, N-terminal domain
SH08_RS18960	PF02772	S-adenosylmethionine synthetase, central domain
SH08_RS18960	PF02773	S-adenosylmethionine synthetase, C-terminal domain
SH08_RS18970	PF10263	SH08_RS18970
SH08_RS18975	PF04231	Endonuclease I
SH08_RS18980	PF04452	RNA methyltransferase
SH08_RS18985	PF02951	Prokaryotic glutathione synthetase, N-terminal domain
SH08_RS18985	PF02955	Prokaryotic glutathione synthetase, ATP-grasp domain
SH08_RS18990	PF02622	Uncharacterized ACR, COG1678
SH08_RS18995	PF03652	Uncharacterised protein family (UPF0081)
SH08_RS19000	PF00437	Type II/IV secretion system protein
SH08_RS19005	PF01168	Alanine racemase, N-terminal domain
SH08_RS19010	PF02325	SH08_RS19010
SH08_RS19015	PF02594	Uncharacterised ACR, YggU family COG1872
SH08_RS19020	PF01725	Ham1 family
SH08_RS19025	PF04055	Radical SAM superfamily
SH08_RS19025	PF06969	HemN C-terminal domain
SH08_RS19030	PF06717	SH08_RS19030
SH08_RS19035	PF00710	Asparaginase
SH08_RS19040	PF11101	SH08_RS19040
SH08_RS19045	PF12035	SH08_RS19045
SH08_RS19050	PF04320	SH08_RS19050
SH08_RS19055	PF02390	Putative methyltransferase
SH08_RS19060	PF00633	Helix-hairpin-helix motif
SH08_RS19060	PF00730	HhH-GPD superfamily base excision DNA repair protein
SH08_RS19060	PF10576	Iron-sulfur binding domain of endonuclease III
SH08_RS19060	PF14815	NUDIX domain
SH08_RS19065	PF04362	Bacterial Fe(2+) trafficking
SH08_RS19070	PF01464	Transglycosylase SLT domain
SH08_RS19070	PF11873	Domain of unknown function (DUF3393)
SH08_RS19075	PF03825	SH08_RS19075
SH08_RS19080	PF01276	Orn/Lys/Arg decarboxylase, major domain
SH08_RS19080	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
SH08_RS19080	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
SH08_RS19085	PF04474	SH08_RS19085
SH08_RS19095	PF04612	Type II secretion system (T2SS), protein M
SH08_RS19100	PF12693	GspL periplasmic domain
SH08_RS19105	PF11356	Type IV pilus biogenesis
SH08_RS19110	PF16549	SH08_RS19110
SH08_RS19115	PF01478	Type IV leader peptidase family
SH08_RS19115	PF06750	SH08_RS19115
SH08_RS19120	PF13322	SH08_RS19120
SH08_RS19120	PF13402	Peptidase M60-like family
SH08_RS19130	PF02652	SH08_RS19130
SH08_RS19135	PF01274	Malate synthase
SH08_RS19140	PF03928	Domain of unknown function (DUF336)
SH08_RS19145	PF02754	SH08_RS19145
SH08_RS19145	PF13183	4Fe-4S dicluster domain
SH08_RS19150	PF01565	FAD binding domain
SH08_RS19155	PF01565	FAD binding domain
SH08_RS19155	PF02913	FAD linked oxidases, C-terminal domain
SH08_RS19160	PF00392	Bacterial regulatory proteins, gntR family
SH08_RS19160	PF07729	FCD domain
SH08_RS19170	PF01609	Transposase DDE domain
SH08_RS19170	PF05598	SH08_RS19170
SH08_RS19175	PF01943	SH08_RS19175
SH08_RS19195	PF01384	SH08_RS19195
SH08_RS19200	PF03738	Glutathionylspermidine synthase preATP-grasp
SH08_RS19200	PF05257	CHAP domain
SH08_RS19205	PF02798	Glutathione S-transferase, N-terminal domain
SH08_RS19205	PF13410	Glutathione S-transferase, C-terminal domain
SH08_RS19210	PF01455	HupF/HypC family
SH08_RS19215	PF01155	Hydrogenase expression/synthesis hypA family
SH08_RS19220	PF11939	Protein of unknown function (DUF3457)
SH08_RS19225	PF01750	Hydrogenase maturation protease
SH08_RS19230	PF00374	Nickel-dependent hydrogenase
SH08_RS19235	PF03916	SH08_RS19235
SH08_RS19240	PF13247	4Fe-4S dicluster domain
SH08_RS19245	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
SH08_RS19245	PF14720	NiFe/NiFeSe hydrogenase small subunit C-terminal
SH08_RS19255	PF11115	SH08_RS19255
SH08_RS19265	PF00248	Aldo/keto reductase family
SH08_RS19270	PF03350	SH08_RS19270
SH08_RS19275	PF13561	Enoyl-(Acyl carrier protein) reductase
SH08_RS19280	PF02472	Biopolymer transport protein ExbD/TolR
SH08_RS19285	PF01618	SH08_RS19285
SH08_RS19295	PF01053	Cys/Met metabolism PLP-dependent enzyme
SH08_RS19300	PF09335	SH08_RS19300
SH08_RS19305	PF06719	SH08_RS19305
SH08_RS19305	PF12833	Helix-turn-helix domain
SH08_RS19315	PF00465	Iron-containing alcohol dehydrogenase
SH08_RS19320	PF00248	Aldo/keto reductase family
SH08_RS19325	PF12883	Protein of unknown function (DUF3828)
SH08_RS19330	PF04728	Lipoprotein leucine-zipper
SH08_RS19335	PF04055	Radical SAM superfamily
SH08_RS19335	PF08497	SH08_RS19335
SH08_RS19335	PF11842	SH08_RS19335
SH08_RS19340	PF00394	Multicopper oxidase
SH08_RS19340	PF07731	Multicopper oxidase
SH08_RS19340	PF07732	Multicopper oxidase
SH08_RS19345	PF01553	Acyltransferase
SH08_RS19355	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
SH08_RS19360	PF15731	SH08_RS19360
SH08_RS19365	PF15723	SH08_RS19365
SH08_RS19370	PF06445	GyrI-like small molecule binding domain
SH08_RS19375	PF04076	Bacterial OB fold (BOF) protein
SH08_RS19380	PF00072	Response regulator receiver domain
SH08_RS19380	PF00486	Transcriptional regulatory protein, C terminal
SH08_RS19385	PF00512	His Kinase A (phospho-acceptor) domain
SH08_RS19385	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH08_RS19385	PF08521	SH08_RS19385
SH08_RS19390	PF10840	SH08_RS19390
SH08_RS19395	PF02525	Flavodoxin-like fold
SH08_RS19400	PF03992	Antibiotic biosynthesis monooxygenase
SH08_RS19405	PF00204	DNA gyrase B
SH08_RS19405	PF00986	DNA gyrase B subunit, carboxyl terminus
SH08_RS19405	PF01751	Toprim domain
SH08_RS19405	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH08_RS19410	PF05728	Uncharacterised protein family (UPF0227)
SH08_RS19415	PF00149	Calcineurin-like phosphoesterase
SH08_RS19420	PF06853	SH08_RS19420
SH08_RS19425	PF00293	NUDIX domain
SH08_RS19430	PF02321	Outer membrane efflux protein
SH08_RS19440	PF06693	SH08_RS19440
SH08_RS19445	PF03738	Glutathionylspermidine synthase preATP-grasp
SH08_RS19450	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
SH08_RS19455	PF02535	SH08_RS19455
SH08_RS19460	PF13260	SH08_RS19460
SH08_RS19465	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
SH08_RS19470	PF04380	SH08_RS19470
SH08_RS19475	PF00419	Fimbrial protein
SH08_RS19480	PF01527	Transposase
SH08_RS19485	PF00665	Integrase core domain
SH08_RS19485	PF13276	SH08_RS19485
SH08_RS19490	PF00577	Outer membrane usher protein
SH08_RS19490	PF13953	PapC C-terminal domain
SH08_RS19490	PF13954	PapC N-terminal domain
SH08_RS19495	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
SH08_RS19495	PF02753	Pili assembly chaperone PapD, C-terminal domain
SH08_RS19500	PF00419	Fimbrial protein
SH08_RS19505	PF08971	Glycogen synthesis protein
SH08_RS19510	PF07290	SH08_RS19510
SH08_RS19515	PF01145	SPFH domain / Band 7 family
SH08_RS19515	PF15975	SH08_RS19515
SH08_RS19530	PF00294	pfkB family carbohydrate kinase
SH08_RS19530	PF01467	Cytidylyltransferase
SH08_RS19535	PF03710	Glutamate-ammonia ligase adenylyltransferase
SH08_RS19535	PF08335	GlnD PII-uridylyltransferase
SH08_RS19540	PF01928	CYTH domain
SH08_RS19550	PF08239	Bacterial SH3 domain
SH08_RS19555	PF01743	Poly A polymerase head domain
SH08_RS19555	PF01966	HD domain
SH08_RS19555	PF12627	Probable RNA and SrmB- binding site of polymerase A
SH08_RS19560	PF02673	SH08_RS19560
SH08_RS19565	PF02152	Dihydroneopterin aldolase
SH08_RS19570	PF02660	SH08_RS19570
SH08_RS19575	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS19575	PF03466	LysR substrate binding domain
SH08_RS19580	PF05681	SH08_RS19580
SH08_RS19590	PF00939	Sodium:sulfate symporter transmembrane region
SH08_RS19595	PF00814	Glycoprotease family
SH08_RS19600	PF01165	Ribosomal protein S21
SH08_RS19610	PF00140	Sigma-70 factor, region 1
SH08_RS19610	PF03979	Sigma-70 factor, region 1
SH08_RS19610	PF04539	Sigma-70 region 3
SH08_RS19610	PF04542	Sigma-70 region 2
SH08_RS19610	PF04545	Sigma-70, region 4
SH08_RS19610	PF04546	Sigma-70, non-essential region
SH08_RS19615	PF03167	Uracil DNA glycosylase superfamily
SH08_RS19625	PF04954	Siderophore-interacting protein
SH08_RS19625	PF08021	Siderophore-interacting FAD-binding domain
SH08_RS19630	PF03551	Transcriptional regulator PadR-like family
SH08_RS19635	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
SH08_RS19635	PF00672	HAMP domain
SH08_RS19635	PF08447	PAS fold
SH08_RS19640	PF00202	Aminotransferase class-III
SH08_RS19645	PF01588	Putative tRNA binding domain
SH08_RS19650	PF00356	Bacterial regulatory proteins, lacI family
SH08_RS19650	PF13377	Periplasmic binding protein-like domain
SH08_RS19655	PF00703	Glycosyl hydrolases family 2
SH08_RS19655	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
SH08_RS19655	PF02837	Glycosyl hydrolases family 2, sugar binding domain
SH08_RS19655	PF02929	Beta galactosidase small chain
SH08_RS19655	PF16353	SH08_RS19655
SH08_RS19660	PF04074	Domain of unknown function (DUF386)
SH08_RS19665	PF13520	Amino acid permease
SH08_RS19675	PF01204	Trehalase
SH08_RS19680	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
SH08_RS19680	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SH08_RS19685	PF01381	Helix-turn-helix
SH08_RS19690	PF09907	SH08_RS19690
SH08_RS19700	PF05175	Methyltransferase small domain
SH08_RS19705	PF01863	Protein of unknown function DUF45
SH08_RS19710	PF02698	DUF218 domain
SH08_RS19715	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
SH08_RS19720	PF03741	SH08_RS19720
SH08_RS19725	PF00375	Sodium:dicarboxylate symporter family
SH08_RS19730	PF10688	SH08_RS19730
SH08_RS19735	PF04295	SH08_RS19735
SH08_RS19735	PF08666	SAF domain
SH08_RS19740	PF02614	Glucuronate isomerase
SH08_RS19745	PF07690	Major Facilitator Superfamily
SH08_RS19750	PF00392	Bacterial regulatory proteins, gntR family
SH08_RS19750	PF07729	FCD domain
SH08_RS19755	PF09335	SH08_RS19755
SH08_RS19760	PF13721	SecD export protein N-terminal TM region
SH08_RS19765	PF06476	SH08_RS19765
SH08_RS19770	PF05957	SH08_RS19770
SH08_RS19775	PF07332	SH08_RS19775
SH08_RS19780	PF13997	SH08_RS19780
SH08_RS19785	PF07681	SH08_RS19785
SH08_RS19790	PF13409	Glutathione S-transferase, N-terminal domain
SH08_RS19790	PF13410	Glutathione S-transferase, C-terminal domain
SH08_RS19795	PF05656	SH08_RS19795
SH08_RS19800	PF05656	SH08_RS19800
SH08_RS19805	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS19805	PF03466	LysR substrate binding domain
SH08_RS19810	PF02678	Pirin
SH08_RS19820	PF03313	SH08_RS19820
SH08_RS19830	PF03313	SH08_RS19830
SH08_RS19830	PF03315	Serine dehydratase beta chain
SH08_RS19835	PF01042	Endoribonuclease L-PSP
SH08_RS19840	PF01228	Glycine radical
SH08_RS19840	PF02901	Pyruvate formate lyase
SH08_RS19850	PF01609	Transposase DDE domain
SH08_RS19850	PF05598	SH08_RS19850
SH08_RS19855	PF00871	Acetokinase family
SH08_RS19860	PF03222	Tryptophan/tyrosine permease family
SH08_RS19865	PF00291	Pyridoxal-phosphate dependent enzyme
SH08_RS19870	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS19870	PF03466	LysR substrate binding domain
SH08_RS19890	PF02595	Glycerate kinase family
SH08_RS19895	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
SH08_RS19895	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
SH08_RS19900	PF03328	HpcH/HpaI aldolase/citrate lyase family
SH08_RS19905	PF07690	Major Facilitator Superfamily
SH08_RS19915	PF04295	SH08_RS19915
SH08_RS19915	PF08666	SAF domain
SH08_RS19920	PF15937	SH08_RS19920
SH08_RS19925	PF11663	SH08_RS19925
SH08_RS19930	PF00455	SH08_RS19930
SH08_RS19930	PF08220	DeoR-like helix-turn-helix domain
SH08_RS19935	PF08013	Tagatose 6 phosphate kinase
SH08_RS19940	PF03830	PTS system sorbose subfamily IIB component
SH08_RS19945	PF03609	SH08_RS19945
SH08_RS19950	PF01979	Amidohydrolase family
SH08_RS19955	PF01380	SIS domain
SH08_RS19960	PF01116	Fructose-bisphosphate aldolase class-II
SH08_RS19965	PF03830	PTS system sorbose subfamily IIB component
SH08_RS19970	PF03609	SH08_RS19970
SH08_RS19975	PF03613	SH08_RS19975
SH08_RS19980	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
SH08_RS19985	PF00419	Fimbrial protein
SH08_RS19990	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
SH08_RS19990	PF02753	Pili assembly chaperone PapD, C-terminal domain
SH08_RS19995	PF00577	Outer membrane usher protein
SH08_RS19995	PF13953	PapC C-terminal domain
SH08_RS19995	PF13954	PapC N-terminal domain
SH08_RS20000	PF00419	Fimbrial protein
SH08_RS20005	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
SH08_RS20010	PF04348	LppC putative lipoprotein
SH08_RS20015	PF02021	Uncharacterised protein family UPF0102
SH08_RS20020	PF13580	SIS domain
SH08_RS20025	PF04972	BON domain
SH08_RS20030	PF03773	SH08_RS20030
SH08_RS20035	PF13460	NADH(P)-binding
SH08_RS20040	PF01965	DJ-1/PfpI family
SH08_RS20050	PF01541	GIY-YIG catalytic domain
SH08_RS20055	PF13508	Acetyltransferase (GNAT) domain
SH08_RS20060	PF02036	SCP-2 sterol transfer family
SH08_RS20065	PF01136	SH08_RS20065
SH08_RS20070	PF01136	SH08_RS20070
SH08_RS20075	PF00296	Luciferase-like monooxygenase
SH08_RS20080	PF03222	Tryptophan/tyrosine permease family
SH08_RS20090	PF00270	DEAD/DEAH box helicase
SH08_RS20090	PF00271	Helicase conserved C-terminal domain
SH08_RS20090	PF03880	DbpA RNA binding domain
SH08_RS20090	PF12343	SH08_RS20090
SH08_RS20095	PF07719	Tetratricopeptide repeat
SH08_RS20095	PF13181	Tetratricopeptide repeat
SH08_RS20100	PF00013	KH domain
SH08_RS20100	PF00575	S1 RNA binding domain
SH08_RS20100	PF01138	3' exoribonuclease family, domain 1
SH08_RS20100	PF03725	3' exoribonuclease family, domain 2
SH08_RS20100	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
SH08_RS20105	PF00312	Ribosomal protein S15
SH08_RS20110	PF01509	TruB family pseudouridylate synthase (N terminal domain)
SH08_RS20110	PF09157	Pseudouridine synthase II TruB, C-terminal
SH08_RS20110	PF16198	SH08_RS20110
SH08_RS20115	PF02033	Ribosome-binding factor A
SH08_RS20120	PF00009	Elongation factor Tu GTP binding domain
SH08_RS20120	PF04760	Translation initiation factor IF-2, N-terminal region
SH08_RS20120	PF08364	SH08_RS20120
SH08_RS20120	PF11987	Translation-initiation factor 2
SH08_RS20125	PF00575	S1 RNA binding domain
SH08_RS20125	PF08529	NusA N-terminal domain
SH08_RS20125	PF13184	NusA-like KH domain
SH08_RS20125	PF14520	Helix-hairpin-helix domain
SH08_RS20130	PF02576	Uncharacterised BCR, YhbC family COG0779
SH08_RS20140	PF00764	Arginosuccinate synthase
SH08_RS20145	PF00884	Sulfatase
SH08_RS20155	PF03840	Preprotein translocase SecG subunit
SH08_RS20160	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
SH08_RS20160	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
SH08_RS20160	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
SH08_RS20160	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
SH08_RS20165	PF00809	Pterin binding enzyme
SH08_RS20170	PF00004	ATPase family associated with various cellular activities (AAA)
SH08_RS20170	PF01434	Peptidase family M41
SH08_RS20170	PF06480	FtsH Extracellular
SH08_RS20175	PF01728	FtsJ-like methyltransferase
SH08_RS20180	PF01985	CRS1 / YhbY (CRM) domain
SH08_RS20185	PF01272	Transcription elongation factor, GreA/GreB, C-term
SH08_RS20185	PF03449	Transcription elongation factor, N-terminal
SH08_RS20190	PF02113	D-Ala-D-Ala carboxypeptidase 3 (S13) family
SH08_RS20195	PF01018	GTP1/OBG
SH08_RS20195	PF01926	50S ribosome-binding GTPase
SH08_RS20200	PF00892	EamA-like transporter family
SH08_RS20205	PF01016	Ribosomal L27 protein
SH08_RS20210	PF00829	Ribosomal prokaryotic L21 protein
SH08_RS20215	PF00348	Polyprenyl synthetase
SH08_RS20220	PF13693	Winged helix-turn-helix DNA-binding
SH08_RS20225	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
SH08_RS20230	PF01722	BolA-like protein
SH08_RS20235	PF13466	STAS domain
SH08_RS20240	PF05494	Toluene tolerance, Ttg2
SH08_RS20245	PF02470	SH08_RS20245
SH08_RS20250	PF02405	SH08_RS20250
SH08_RS20255	PF00005	ABC transporter
SH08_RS20260	PF01699	Sodium/calcium exchanger protein
SH08_RS20265	PF00571	CBS domain
SH08_RS20265	PF01380	SIS domain
SH08_RS20270	PF08282	haloacid dehalogenase-like hydrolase
SH08_RS20275	PF06835	Lipopolysaccharide-assembly, LptC-related
SH08_RS20280	PF03968	OstA-like protein
SH08_RS20285	PF00005	ABC transporter
SH08_RS20285	PF12399	Branched-chain amino acid ATP-binding cassette transporter
SH08_RS20290	PF00309	SH08_RS20290
SH08_RS20290	PF04552	Sigma-54, DNA binding domain
SH08_RS20290	PF04963	Sigma-54 factor, core binding domain
SH08_RS20295	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
SH08_RS20300	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
SH08_RS20305	PF03668	SH08_RS20305
SH08_RS20310	PF00381	PTS HPr component phosphorylation site
SH08_RS20315	PF10707	SH08_RS20315
SH08_RS20320	PF01609	Transposase DDE domain
SH08_RS20320	PF05598	SH08_RS20320
SH08_RS20330	PF06551	SH08_RS20330
SH08_RS20335	PF06250	SH08_RS20335
SH08_RS20340	PF04074	Domain of unknown function (DUF386)
SH08_RS20345	PF00480	ROK family
SH08_RS20350	PF04131	Putative N-acetylmannosamine-6-phosphate epimerase
SH08_RS20355	PF07690	Major Facilitator Superfamily
SH08_RS20360	PF00701	Dihydrodipicolinate synthetase family
SH08_RS20365	PF00392	Bacterial regulatory proteins, gntR family
SH08_RS20365	PF07729	FCD domain
SH08_RS20370	PF03606	SH08_RS20370
SH08_RS20375	PF04386	Stringent starvation protein B
SH08_RS20380	PF00043	Glutathione S-transferase, C-terminal domain
SH08_RS20380	PF02798	Glutathione S-transferase, N-terminal domain
SH08_RS20385	PF00380	Ribosomal protein S9/S16
SH08_RS20390	PF00572	Ribosomal protein L13
SH08_RS20395	PF03969	AFG1-like ATPase
SH08_RS20400	PF06295	SH08_RS20400
SH08_RS20405	PF00595	PDZ domain (Also known as DHR or GLGF)
SH08_RS20405	PF13180	PDZ domain
SH08_RS20405	PF13365	Trypsin-like peptidase domain
SH08_RS20410	PF13180	PDZ domain
SH08_RS20410	PF13365	Trypsin-like peptidase domain
SH08_RS20415	PF00056	lactate/malate dehydrogenase, NAD binding domain
SH08_RS20415	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
SH08_RS20420	PF01316	Arginine repressor, DNA binding domain
SH08_RS20420	PF02863	Arginine repressor, C-terminal domain
SH08_RS20425	PF07338	Protein of unknown function (DUF1471)
SH08_RS20430	PF01337	Barstar (barnase inhibitor)
SH08_RS20435	PF04632	SH08_RS20435
SH08_RS20440	PF13437	HlyD family secretion protein
SH08_RS20440	PF13533	Biotin-lipoyl like
SH08_RS20445	PF07869	SH08_RS20445
SH08_RS20450	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS20450	PF03466	LysR substrate binding domain
SH08_RS20455	PF01523	Putative modulator of DNA gyrase
SH08_RS20460	PF13116	SH08_RS20460
SH08_RS20460	PF13502	SH08_RS20460
SH08_RS20465	PF00575	S1 RNA binding domain
SH08_RS20465	PF10150	Ribonuclease E/G family
SH08_RS20470	PF02545	Maf-like protein
SH08_RS20475	PF04093	SH08_RS20475
SH08_RS20480	PF04085	rod shape-determining protein MreC
SH08_RS20485	PF06723	MreB/Mbl protein
SH08_RS20495	PF00563	EAL domain
SH08_RS20495	PF00990	GGDEF domain
SH08_RS20495	PF17157	SH08_RS20495
SH08_RS20500	PF00107	Zinc-binding dehydrogenase
SH08_RS20500	PF08240	Alcohol dehydrogenase GroES-like domain
SH08_RS20520	PF00364	Biotin-requiring enzyme
SH08_RS20525	PF00289	Carbamoyl-phosphate synthase L chain, N-terminal domain
SH08_RS20525	PF02785	Biotin carboxylase C-terminal domain
SH08_RS20525	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
SH08_RS20530	PF06196	SH08_RS20530
SH08_RS20535	PF00474	Sodium:solute symporter family
SH08_RS20540	PF06325	Ribosomal protein L11 methyltransferase (PrmA)
SH08_RS20545	PF01207	Dihydrouridine synthase (Dus)
SH08_RS20550	PF02954	Bacterial regulatory protein, Fis family
SH08_RS20555	PF01555	DNA methylase
SH08_RS20560	PF10831	SH08_RS20560
SH08_RS20565	PF00440	Bacterial regulatory proteins, tetR family
SH08_RS20565	PF08361	MAATS-type transcriptional repressor, C-terminal region
SH08_RS20570	PF00529	HlyD family secretion protein
SH08_RS20570	PF16576	SH08_RS20570
SH08_RS20575	PF00873	AcrB/AcrD/AcrF family
SH08_RS20590	PF00497	Bacterial extracellular solute-binding proteins, family 3
SH08_RS20595	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS20600	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS20605	PF00005	ABC transporter
SH08_RS20645	PF00132	Bacterial transferase hexapeptide (six repeats)
SH08_RS20650	PF07369	Protein of unknown function (DUF1488)
SH08_RS20655	PF01488	Shikimate / quinate 5-dehydrogenase
SH08_RS20655	PF08501	Shikimate dehydrogenase substrate binding domain
SH08_RS20660	PF01300	Telomere recombination
SH08_RS20665	PF01396	SH08_RS20665
SH08_RS20670	PF04361	SH08_RS20670
SH08_RS20675	PF02481	DNA recombination-mediator protein A
SH08_RS20680	PF01327	Polypeptide deformylase
SH08_RS20685	PF00551	Formyl transferase
SH08_RS20685	PF02911	Formyl transferase, C-terminal domain
SH08_RS20690	PF01029	NusB family
SH08_RS20690	PF01189	NOL1/NOP2/sun family
SH08_RS20695	PF02080	TrkA-C domain
SH08_RS20695	PF02254	TrkA-N domain
SH08_RS20700	PF01741	Large-conductance mechanosensitive channel, MscL
SH08_RS20705	PF03889	SH08_RS20705
SH08_RS20710	PF13411	MerR HTH family regulatory protein
SH08_RS20715	PF09350	SH08_RS20715
SH08_RS20720	PF01196	Ribosomal protein L17
SH08_RS20725	PF01000	RNA polymerase Rpb3/RpoA insert domain
SH08_RS20725	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
SH08_RS20725	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
SH08_RS20730	PF00163	Ribosomal protein S4/S9 N-terminal domain
SH08_RS20730	PF01479	S4 domain
SH08_RS20735	PF00411	Ribosomal protein S11
SH08_RS20740	PF00416	Ribosomal protein S13/S18
SH08_RS20745	PF00444	Ribosomal protein L36
SH08_RS20750	PF00344	SecY translocase
SH08_RS20755	PF00828	Ribosomal protein L18e/L15
SH08_RS20760	PF00327	Ribosomal protein L30p/L7e
SH08_RS20765	PF00333	Ribosomal protein S5, N-terminal domain
SH08_RS20765	PF03719	Ribosomal protein S5, C-terminal domain
SH08_RS20770	PF00861	Ribosomal L18p/L5e family
SH08_RS20775	PF00347	Ribosomal protein L6
SH08_RS20780	PF00410	Ribosomal protein S8
SH08_RS20785	PF00253	Ribosomal protein S14p/S29e
SH08_RS20790	PF00281	Ribosomal protein L5
SH08_RS20790	PF00673	ribosomal L5P family C-terminus
SH08_RS20795	PF00467	KOW motif
SH08_RS20795	PF17136	SH08_RS20795
SH08_RS20800	PF00238	Ribosomal protein L14p/L23e
SH08_RS20805	PF00366	Ribosomal protein S17
SH08_RS20810	PF00831	Ribosomal L29 protein
SH08_RS20815	PF00252	Ribosomal protein L16p/L10e
SH08_RS20820	PF00189	Ribosomal protein S3, C-terminal domain
SH08_RS20820	PF07650	KH domain
SH08_RS20825	PF00237	Ribosomal protein L22p/L17e
SH08_RS20830	PF00203	Ribosomal protein S19
SH08_RS20835	PF00181	Ribosomal Proteins L2, RNA binding domain
SH08_RS20835	PF03947	Ribosomal Proteins L2, C-terminal domain
SH08_RS20840	PF00276	Ribosomal protein L23
SH08_RS20845	PF00573	Ribosomal protein L4/L1 family
SH08_RS20850	PF00297	Ribosomal protein L3
SH08_RS20855	PF00338	Ribosomal protein S10p/S20e
SH08_RS20865	PF01471	Putative peptidoglycan binding domain
SH08_RS20865	PF13401	AAA domain
SH08_RS20870	PF11356	Type IV pilus biogenesis
SH08_RS20875	PF00263	SH08_RS20875
SH08_RS20875	PF03958	Bacterial type II/III secretion system short domain
SH08_RS20880	PF00437	Type II/IV secretion system protein
SH08_RS20885	PF00482	Type II secretion system (T2SS), protein F
SH08_RS20890	PF08334	Type II secretion system (T2SS), protein G
SH08_RS20890	PF13544	SH08_RS20890
SH08_RS20895	PF12019	Type II transport protein GspH
SH08_RS20895	PF13544	SH08_RS20895
SH08_RS20900	PF02501	Type II secretion system (T2SS), protein I
SH08_RS20900	PF13544	SH08_RS20900
SH08_RS20905	PF13544	SH08_RS20905
SH08_RS20910	PF03934	Type II secretion system (T2SS), protein K
SH08_RS20915	PF05134	Type II secretion system (T2SS), protein L
SH08_RS20915	PF12693	GspL periplasmic domain
SH08_RS20920	PF04612	Type II secretion system (T2SS), protein M
SH08_RS20925	PF01478	Type IV leader peptidase family
SH08_RS20930	PF00210	Ferritin-like domain
SH08_RS20935	PF04324	BFD-like [2Fe-2S] binding domain
SH08_RS20940	PF02839	Carbohydrate binding domain
SH08_RS20945	PF00009	Elongation factor Tu GTP binding domain
SH08_RS20945	PF03143	Elongation factor Tu C-terminal domain
SH08_RS20945	PF03144	Elongation factor Tu domain 2
SH08_RS20950	PF00009	Elongation factor Tu GTP binding domain
SH08_RS20950	PF00679	Elongation factor G C-terminus
SH08_RS20950	PF03144	Elongation factor Tu domain 2
SH08_RS20950	PF03764	Elongation factor G, domain IV
SH08_RS20950	PF14492	Elongation Factor G, domain II
SH08_RS20955	PF00177	Ribosomal protein S7p/S5e
SH08_RS20960	PF00164	Ribosomal protein S12/S23
SH08_RS20965	PF04077	DsrH like protein
SH08_RS20970	PF02635	DsrE/DsrF-like family
SH08_RS20975	PF02635	DsrE/DsrF-like family
SH08_RS20980	PF08348	SH08_RS20980
SH08_RS20980	PF13309	SH08_RS20980
SH08_RS20985	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
SH08_RS20985	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
SH08_RS20990	PF04102	SlyX
SH08_RS20995	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
SH08_RS21000	PF09526	SH08_RS21000
SH08_RS21005	PF00999	Sodium/hydrogen exchanger family
SH08_RS21005	PF02254	TrkA-N domain
SH08_RS21010	PF02525	Flavodoxin-like fold
SH08_RS21015	PF00005	ABC transporter
SH08_RS21015	PF12848	ABC transporter
SH08_RS21020	PF00561	alpha/beta hydrolase fold
SH08_RS21025	PF06794	Uncharacterised protein family (UPF0270)
SH08_RS21030	PF00485	Phosphoribulokinase / Uridine kinase family
SH08_RS21035	PF02566	OsmC-like protein
SH08_RS21045	PF00027	Cyclic nucleotide-binding domain
SH08_RS21045	PF00325	Bacterial regulatory proteins, crp family
SH08_RS21050	PF12805	SH08_RS21050
SH08_RS21050	PF13515	SH08_RS21050
SH08_RS21055	PF00202	Aminotransferase class-III
SH08_RS21060	PF00117	Glutamine amidotransferase class-I
SH08_RS21065	PF02661	Fic/DOC family
SH08_RS21070	PF10832	SH08_RS21070
SH08_RS21075	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
SH08_RS21080	PF07690	Major Facilitator Superfamily
SH08_RS21085	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
SH08_RS21085	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
SH08_RS21085	PF04324	BFD-like [2Fe-2S] binding domain
SH08_RS21085	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SH08_RS21090	PF13806	Rieske-like [2Fe-2S] domain
SH08_RS21095	PF01226	Formate/nitrite transporter
SH08_RS21100	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
SH08_RS21100	PF10414	Sirohaem synthase dimerisation region
SH08_RS21100	PF13241	Putative NAD(P)-binding
SH08_RS21100	PF14824	Sirohaem biosynthesis protein central
SH08_RS21105	PF13978	SH08_RS21105
SH08_RS21110	PF13520	Amino acid permease
SH08_RS21115	PF01380	SIS domain
SH08_RS21120	PF01261	Xylose isomerase-like TIM barrel
SH08_RS21125	PF00294	pfkB family carbohydrate kinase
SH08_RS21130	PF00392	Bacterial regulatory proteins, gntR family
SH08_RS21130	PF07702	UTRA domain
SH08_RS21135	PF00155	Aminotransferase class I and II
SH08_RS21140	PF10797	SH08_RS21140
SH08_RS21145	PF10941	SH08_RS21145
SH08_RS21150	PF02126	Phosphotriesterase family
SH08_RS21155	PF01676	Metalloenzyme superfamily
SH08_RS21160	PF01168	Alanine racemase, N-terminal domain
SH08_RS21170	PF14502	Helix-turn-helix domain
SH08_RS21170	PF14503	YhfZ C-terminal domain
SH08_RS21175	PF00579	tRNA synthetases class I (W and Y)
SH08_RS21180	PF13419	Haloacid dehalogenase-like hydrolase
SH08_RS21185	PF00834	Ribulose-phosphate 3 epimerase family
SH08_RS21190	PF02086	D12 class N6 adenine-specific DNA methyltransferase
SH08_RS21195	PF05036	Sporulation related domain
SH08_RS21200	PF01761	3-dehydroquinate synthase
SH08_RS21205	PF01202	Shikimate kinase
SH08_RS21210	PF00263	SH08_RS21210
SH08_RS21210	PF03958	Bacterial type II/III secretion system short domain
SH08_RS21215	PF10748	SH08_RS21215
SH08_RS21225	PF05137	SH08_RS21225
SH08_RS21235	PF00905	Penicillin binding protein transpeptidase domain
SH08_RS21235	PF00912	Transglycosylase
SH08_RS21235	PF17092	SH08_RS21235
SH08_RS21240	PF00293	NUDIX domain
SH08_RS21245	PF07095	Intracellular growth attenuator protein IgaA
SH08_RS21250	PF13419	Haloacid dehalogenase-like hydrolase
SH08_RS21255	PF01479	S4 domain
SH08_RS21260	PF01430	Hsp33 protein
SH08_RS21265	PF13687	SH08_RS21265
SH08_RS21275	PF01293	Phosphoenolpyruvate carboxykinase
SH08_RS21280	PF00512	His Kinase A (phospho-acceptor) domain
SH08_RS21280	PF00672	HAMP domain
SH08_RS21280	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH08_RS21285	PF00072	Response regulator receiver domain
SH08_RS21285	PF00486	Transcriptional regulatory protein, C terminal
SH08_RS21290	PF01272	Transcription elongation factor, GreA/GreB, C-term
SH08_RS21290	PF03449	Transcription elongation factor, N-terminal
SH08_RS21295	PF00575	S1 RNA binding domain
SH08_RS21295	PF09371	Tex-like protein N-terminal domain
SH08_RS21295	PF12836	Helix-hairpin-helix motif
SH08_RS21295	PF16921	SH08_RS21295
SH08_RS21300	PF04023	FeoA domain
SH08_RS21305	PF02421	Ferrous iron transport protein B
SH08_RS21305	PF07664	SH08_RS21305
SH08_RS21305	PF07670	Nucleoside recognition
SH08_RS21310	PF09012	FeoC like transcriptional regulator
SH08_RS21315	PF04754	SH08_RS21315
SH08_RS21320	PF00561	alpha/beta hydrolase fold
SH08_RS21325	PF00156	Phosphoribosyl transferase domain
SH08_RS21330	PF01106	NifU-like domain
SH08_RS21330	PF01521	Iron-sulphur cluster biosynthesis
SH08_RS21335	PF02447	SH08_RS21335
SH08_RS21340	PF02446	4-alpha-glucanotransferase
SH08_RS21345	PF00343	Carbohydrate phosphorylase
SH08_RS21350	PF00196	Bacterial regulatory proteins, luxR family
SH08_RS21355	PF01137	RNA 3'-terminal phosphate cyclase
SH08_RS21355	PF05189	RNA 3'-terminal phosphate cyclase (RTC), insert domain
SH08_RS21360	PF01139	tRNA-splicing ligase RtcB
SH08_RS21365	PF00158	Sigma-54 interaction domain
SH08_RS21365	PF06956	SH08_RS21365
SH08_RS21370	PF00455	SH08_RS21370
SH08_RS21370	PF08220	DeoR-like helix-turn-helix domain
SH08_RS21375	PF01694	Rhomboid family
SH08_RS21375	PF12122	Protein of unknown function (DUF3582)
SH08_RS21380	PF00581	Rhodanese-like domain
SH08_RS21385	PF01266	FAD dependent oxidoreductase
SH08_RS21385	PF16901	SH08_RS21385
SH08_RS21395	PF00343	Carbohydrate phosphorylase
SH08_RS21400	PF00534	Glycosyl transferases group 1
SH08_RS21400	PF08323	Starch synthase catalytic domain
SH08_RS21405	PF00483	Nucleotidyl transferase
SH08_RS21410	PF00128	Alpha amylase, catalytic domain
SH08_RS21410	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
SH08_RS21415	PF00128	Alpha amylase, catalytic domain
SH08_RS21415	PF02806	Alpha amylase, C-terminal all-beta domain
SH08_RS21415	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
SH08_RS21420	PF01118	Semialdehyde dehydrogenase, NAD binding domain
SH08_RS21420	PF02774	Semialdehyde dehydrogenase, dimerisation domain
SH08_RS21425	PF01914	SH08_RS21425
SH08_RS21430	PF02447	SH08_RS21430
SH08_RS21435	PF01202	Shikimate kinase
SH08_RS21440	PF00356	Bacterial regulatory proteins, lacI family
SH08_RS21440	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
SH08_RS21445	PF02678	Pirin
SH08_RS21450	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
SH08_RS21450	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
SH08_RS21455	PF00583	Acetyltransferase (GNAT) family
SH08_RS21460	PF05638	Protein of unknown function (DUF796)
SH08_RS21460	PF12639	DNase/tRNase domain of colicin-like bacteriocin
SH08_RS21470	PF03400	SH08_RS21470
SH08_RS21475	PF15567	SH08_RS21475
SH08_RS21480	PF01019	Gamma-glutamyltranspeptidase
SH08_RS21485	PF10956	SH08_RS21485
SH08_RS21490	PF03009	Glycerophosphoryl diester phosphodiesterase family
SH08_RS21495	PF00005	ABC transporter
SH08_RS21495	PF08402	TOBE domain
SH08_RS21500	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS21505	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS21510	PF13416	Bacterial extracellular solute-binding protein
SH08_RS21515	PF12035	SH08_RS21515
SH08_RS21520	PF00005	ABC transporter
SH08_RS21525	PF00005	ABC transporter
SH08_RS21525	PF12399	Branched-chain amino acid ATP-binding cassette transporter
SH08_RS21530	PF02653	SH08_RS21530
SH08_RS21530	PF11862	SH08_RS21530
SH08_RS21535	PF02653	SH08_RS21535
SH08_RS21540	PF13458	Periplasmic binding protein
SH08_RS21545	PF12568	Acetyltransferase (GNAT) domain
SH08_RS21550	PF12035	SH08_RS21550
SH08_RS21555	PF13458	Periplasmic binding protein
SH08_RS21560	PF04542	Sigma-70 region 2
SH08_RS21560	PF04545	Sigma-70, region 4
SH08_RS21565	PF02687	SH08_RS21565
SH08_RS21570	PF00005	ABC transporter
SH08_RS21575	PF00448	SRP54-type protein, GTPase domain
SH08_RS21575	PF02881	SRP54-type protein, helical bundle domain
SH08_RS21580	PF03602	Conserved hypothetical protein 95
SH08_RS21585	PF06611	SH08_RS21585
SH08_RS21590	PF10694	Protein of unknown function (DUF2500)
SH08_RS21595	PF07947	SH08_RS21595
SH08_RS21600	PF00122	E1-E2 ATPase
SH08_RS21600	PF00403	Heavy-metal-associated domain
SH08_RS21600	PF00702	haloacid dehalogenase-like hydrolase
SH08_RS21605	PF01206	Sulfurtransferase TusA
SH08_RS21610	PF02592	SH08_RS21610
SH08_RS21615	PF08786	Domain of unknown function (DUF1795)
SH08_RS21620	PF07690	Major Facilitator Superfamily
SH08_RS21625	PF01594	SH08_RS21625
SH08_RS21630	PF01648	4'-phosphopantetheinyl transferase superfamily
SH08_RS21635	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
SH08_RS21640	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS21645	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS21650	PF00005	ABC transporter
SH08_RS21655	PF00005	ABC transporter
SH08_RS21660	PF01402	Ribbon-helix-helix protein, copG family
SH08_RS21660	PF08753	NikR C terminal nickel binding domain
SH08_RS21665	PF03527	SH08_RS21665
SH08_RS21665	PF05593	SH08_RS21665
SH08_RS21665	PF14220	SH08_RS21665
SH08_RS21670	PF15631	SH08_RS21670
SH08_RS21680	PF01609	Transposase DDE domain
SH08_RS21680	PF13808	SH08_RS21680
SH08_RS21685	PF12698	ABC-2 family transporter protein
SH08_RS21690	PF00005	ABC transporter
SH08_RS21690	PF12698	ABC-2 family transporter protein
SH08_RS21695	PF13437	HlyD family secretion protein
SH08_RS21695	PF13533	Biotin-lipoyl like
SH08_RS21700	PF13258	SH08_RS21700
SH08_RS21720	PF10951	SH08_RS21720
SH08_RS21725	PF03486	HI0933-like protein
SH08_RS21730	PF01384	SH08_RS21730
SH08_RS21735	PF10625	SH08_RS21735
SH08_RS21740	PF00582	Universal stress protein family
SH08_RS21745	PF00854	POT family
SH08_RS21750	PF04445	Putative SAM-dependent methyltransferase
SH08_RS21755	PF01432	Peptidase family M3
SH08_RS21760	PF04378	Ribosomal RNA small subunit methyltransferase D, RsmJ
SH08_RS21765	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
SH08_RS21765	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SH08_RS21780	PF01022	Bacterial regulatory protein, arsR family
SH08_RS21785	PF02040	SH08_RS21785
SH08_RS21790	PF03960	ArsC family
SH08_RS21800	PF01609	Transposase DDE domain
SH08_RS21800	PF05598	SH08_RS21800
SH08_RS21810	PF03843	SH08_RS21810
SH08_RS21815	PF00196	Bacterial regulatory proteins, luxR family
SH08_RS21820	PF02308	SH08_RS21820
SH08_RS21825	PF06411	HdeA/HdeB family
SH08_RS21830	PF06411	HdeA/HdeB family
SH08_RS21835	PF03729	SH08_RS21835
SH08_RS21840	PF00196	Bacterial regulatory proteins, luxR family
SH08_RS21850	PF00529	HlyD family secretion protein
SH08_RS21850	PF16576	SH08_RS21850
SH08_RS21855	PF00873	AcrB/AcrD/AcrF family
SH08_RS21860	PF12833	Helix-turn-helix domain
SH08_RS21865	PF12833	Helix-turn-helix domain
SH08_RS21870	PF00282	Pyridoxal-dependent decarboxylase conserved domain
SH08_RS21875	PF00034	Cytochrome c
SH08_RS21875	PF03150	Di-haem cytochrome c peroxidase
SH08_RS21875	PF14376	SH08_RS21875
SH08_RS21880	PF01204	Trehalase
SH08_RS21885	PF00196	Bacterial regulatory proteins, luxR family
SH08_RS21890	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS21890	PF03466	LysR substrate binding domain
SH08_RS21895	PF03631	SH08_RS21895
SH08_RS21900	PF00083	Sugar (and other) transporter
SH08_RS21900	PF07690	Major Facilitator Superfamily
SH08_RS21905	PF05170	SH08_RS21905
SH08_RS21910	PF00563	EAL domain
SH08_RS21920	PF00294	pfkB family carbohydrate kinase
SH08_RS21925	PF00675	Insulinase (Peptidase family M16)
SH08_RS21925	PF05193	Peptidase M16 inactive domain
SH08_RS21930	PF00375	Sodium:dicarboxylate symporter family
SH08_RS21935	PF00563	EAL domain
SH08_RS21935	PF00672	HAMP domain
SH08_RS21935	PF00990	GGDEF domain
SH08_RS21935	PF17154	SH08_RS21935
SH08_RS21940	PF05420	SH08_RS21940
SH08_RS21940	PF13432	Tetratricopeptide repeat
SH08_RS21940	PF14559	Tetratricopeptide repeat
SH08_RS21945	PF01270	Glycosyl hydrolases family 8
SH08_RS21950	PF03170	Bacterial cellulose synthase subunit
SH08_RS21955	PF00535	Glycosyl transferase family 2
SH08_RS21955	PF03552	Cellulose synthase
SH08_RS21955	PF07238	PilZ domain
SH08_RS21960	PF06564	YhjQ protein
SH08_RS21965	PF10945	SH08_RS21965
SH08_RS21970	PF01609	Transposase DDE domain
SH08_RS21970	PF05598	SH08_RS21970
SH08_RS21975	PF10995	SH08_RS21975
SH08_RS21980	PF11120	SH08_RS21980
SH08_RS21985	PF11658	SH08_RS21985
SH08_RS21990	PF13940	SH08_RS21990
SH08_RS22000	PF03222	Tryptophan/tyrosine permease family
SH08_RS22005	PF00005	ABC transporter
SH08_RS22005	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
SH08_RS22010	PF00005	ABC transporter
SH08_RS22010	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
SH08_RS22015	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS22015	PF12911	SH08_RS22015
SH08_RS22020	PF00528	Binding-protein-dependent transport system inner membrane component
SH08_RS22030	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
SH08_RS22045	PF00884	Sulfatase
SH08_RS22045	PF08019	SH08_RS22045
SH08_RS22050	PF07690	Major Facilitator Superfamily
SH08_RS22055	PF03797	Autotransporter beta-domain
SH08_RS22060	PF03352	Methyladenine glycosylase
SH08_RS22065	PF13673	Acetyltransferase (GNAT) domain
SH08_RS22070	PF00384	Molybdopterin oxidoreductase
SH08_RS22070	PF01568	Molydopterin dinucleotide binding domain
SH08_RS22075	PF00691	OmpA family
SH08_RS22075	PF13488	SH08_RS22075
SH08_RS22080	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
SH08_RS22080	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
SH08_RS22085	PF11254	SH08_RS22085
SH08_RS22090	PF01381	Helix-turn-helix
SH08_RS22095	PF00313	'Cold-shock' DNA-binding domain
SH08_RS22100	PF01848	SH08_RS22100
SH08_RS22105	PF13518	Helix-turn-helix domain
SH08_RS22110	PF00665	Integrase core domain
SH08_RS22110	PF13276	SH08_RS22110
SH08_RS22115	PF02092	SH08_RS22115
SH08_RS22115	PF05746	DALR anticodon binding domain
SH08_RS22120	PF02091	Glycyl-tRNA synthetase alpha subunit
SH08_RS22125	PF13983	SH08_RS22125
SH08_RS22130	PF01757	SH08_RS22130
SH08_RS22135	PF05360	SH08_RS22135
SH08_RS22140	PF05360	SH08_RS22140
SH08_RS22145	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
SH08_RS22145	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
SH08_RS22155	PF13407	Periplasmic binding protein domain
SH08_RS22160	PF03400	SH08_RS22160
SH08_RS22165	PF13407	Periplasmic binding protein domain
SH08_RS22170	PF00005	ABC transporter
SH08_RS22175	PF02653	SH08_RS22175
SH08_RS22180	PF12833	Helix-turn-helix domain
SH08_RS22180	PF13377	Periplasmic binding protein-like domain
SH08_RS22185	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
SH08_RS22190	PF00128	Alpha amylase, catalytic domain
SH08_RS22195	PF00155	Aminotransferase class I and II
SH08_RS22200	PF12035	SH08_RS22200
SH08_RS22205	PF13247	4Fe-4S dicluster domain
SH08_RS22210	PF01614	Bacterial transcriptional regulator
SH08_RS22210	PF09339	IclR helix-turn-helix domain
SH08_RS22215	PF02615	Malate/L-lactate dehydrogenase
SH08_RS22220	PF04074	Domain of unknown function (DUF386)
SH08_RS22225	PF04290	SH08_RS22225
SH08_RS22230	PF06808	SH08_RS22230
SH08_RS22235	PF03480	Bacterial extracellular solute-binding protein, family 7
SH08_RS22240	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
SH08_RS22240	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
SH08_RS22245	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
SH08_RS22250	PF01261	Xylose isomerase-like TIM barrel
SH08_RS22255	PF00596	Class II Aldolase and Adducin N-terminal domain
SH08_RS22260	PF06629	SH08_RS22260
SH08_RS22265	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SH08_RS22265	PF03466	LysR substrate binding domain
SH08_RS22270	PF00529	HlyD family secretion protein
SH08_RS22270	PF16576	SH08_RS22270
SH08_RS22275	PF11742	SH08_RS22275
SH08_RS22285	PF00171	Aldehyde dehydrogenase family
SH08_RS22290	PF00465	Iron-containing alcohol dehydrogenase
SH08_RS22295	PF00009	Elongation factor Tu GTP binding domain
SH08_RS22295	PF03144	Elongation factor Tu domain 2
SH08_RS22295	PF09106	Elongation factor SelB, winged helix
SH08_RS22295	PF09107	Elongation factor SelB, winged helix
SH08_RS22300	PF03841	L-seryl-tRNA selenium transferase
SH08_RS22300	PF12390	SH08_RS22300
SH08_RS22305	PF00043	Glutathione S-transferase, C-terminal domain
SH08_RS22305	PF13417	Glutathione S-transferase, N-terminal domain
SH08_RS22310	PF03527	SH08_RS22310
SH08_RS22310	PF05593	SH08_RS22310
SH08_RS22310	PF15606	SH08_RS22310
SH08_RS22315	PF13646	HEAT repeats
SH08_RS22320	PF03527	SH08_RS22320
SH08_RS22335	PF00529	HlyD family secretion protein
SH08_RS22335	PF16576	SH08_RS22335
SH08_RS22340	PF11742	SH08_RS22340
SH08_RS22350	PF01232	Mannitol dehydrogenase Rossmann domain
SH08_RS22350	PF08125	Mannitol dehydrogenase C-terminal domain
SH08_RS22355	PF05068	Mannitol repressor
SH08_RS22365	PF10928	Protein of unknown function (DUF2810)
SH08_RS22370	PF02652	SH08_RS22370
SH08_RS22375	PF00392	Bacterial regulatory proteins, gntR family
SH08_RS22375	PF07729	FCD domain
SH08_RS22380	PF01070	FMN-dependent dehydrogenase
SH08_RS22385	PF00588	SpoU rRNA Methylase family
SH08_RS22390	PF00132	Bacterial transferase hexapeptide (six repeats)
SH08_RS22390	PF06426	Serine acetyltransferase, N-terminal
SH08_RS22395	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
SH08_RS22395	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
SH08_RS22400	PF02556	Preprotein translocase subunit SecB
SH08_RS22405	PF00462	Glutaredoxin
SH08_RS22410	PF00581	Rhodanese-like domain
SH08_RS22415	PF01676	Metalloenzyme superfamily
SH08_RS22415	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
SH08_RS22420	PF01551	Peptidase family M23
SH08_RS22425	PF04748	Divergent polysaccharide deacetylase
SH08_RS22430	PF00535	Glycosyl transferase family 2
SH08_RS22435	PF00107	Zinc-binding dehydrogenase
SH08_RS22435	PF08240	Alcohol dehydrogenase GroES-like domain
SH08_RS22440	PF00155	Aminotransferase class I and II
SH08_RS22445	PF09612	SH08_RS22445
SH08_RS22450	PF01370	NAD dependent epimerase/dehydratase family
SH08_RS22455	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
SH08_RS22460	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
SH08_RS22465	PF04932	SH08_RS22465
SH08_RS22470	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
SH08_RS22480	PF06176	Lipopolysaccharide core biosynthesis protein (WaaY)
SH08_RS22485	PF01501	Glycosyl transferase family 8
SH08_RS22485	PF08437	SH08_RS22485
SH08_RS22490	PF01501	Glycosyl transferase family 8
SH08_RS22490	PF08437	SH08_RS22490
SH08_RS22495	PF00534	Glycosyl transferases group 1
SH08_RS22495	PF13439	Glycosyltransferase Family 4
SH08_RS22505	PF06293	Lipopolysaccharide kinase (Kdo/WaaP) family
SH08_RS22510	PF00534	Glycosyl transferases group 1
SH08_RS22510	PF13439	Glycosyltransferase Family 4
SH08_RS22515	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
SH08_RS22520	PF00534	Glycosyl transferases group 1
SH08_RS22520	PF04413	3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
SH08_RS22525	PF01467	Cytidylyltransferase
SH08_RS22530	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
SH08_RS22530	PF06827	Zinc finger found in FPG and IleRS
SH08_RS22530	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
SH08_RS22535	PF00471	Ribosomal protein L33
SH08_RS22540	PF00830	Ribosomal L28 family
SH08_RS22545	PF04002	RadC-like JAB domain
SH08_RS22550	PF02441	Flavoprotein
SH08_RS22550	PF04127	DNA / pantothenate metabolism flavoprotein
SH08_RS22555	PF00692	dUTPase
SH08_RS22560	PF00440	Bacterial regulatory proteins, tetR family
SH08_RS22565	PF00156	Phosphoribosyl transferase domain
SH08_RS22570	PF01138	3' exoribonuclease family, domain 1
SH08_RS22570	PF03725	3' exoribonuclease family, domain 2
SH08_RS22575	PF03755	SH08_RS22575
SH08_RS22575	PF08340	SH08_RS22575
SH08_RS22585	PF03458	SH08_RS22585
SH08_RS22590	PF01653	NAD-dependent DNA ligase adenylation domain
SH08_RS22590	PF03120	NAD-dependent DNA ligase OB-fold domain
SH08_RS22595	PF00625	Guanylate kinase
SH08_RS22600	PF01192	RNA polymerase Rpb6
SH08_RS22605	PF02824	TGS domain
SH08_RS22605	PF04607	Region found in RelA / SpoT proteins
SH08_RS22605	PF13291	ACT domain
SH08_RS22605	PF13328	HD domain
SH08_RS22610	PF00588	SpoU rRNA Methylase family
SH08_RS22610	PF12105	SpoU, rRNA methylase, C-terminal
SH08_RS22615	PF00270	DEAD/DEAH box helicase
SH08_RS22615	PF00271	Helicase conserved C-terminal domain
SH08_RS22615	PF17191	SH08_RS22615
SH08_RS22620	PF03616	SH08_RS22620
SH08_RS22625	PF00860	Permease family
SH08_RS22630	PF05170	SH08_RS22630
SH08_RS22635	PF01055	Glycosyl hydrolases family 31
SH08_RS22635	PF13802	Galactose mutarotase-like
SH08_RS22640	PF13347	MFS/sugar transport protein
SH08_RS22655	PF07690	Major Facilitator Superfamily
SH08_RS22660	PF00892	EamA-like transporter family
SH08_RS22665	PF03180	NLPA lipoprotein
SH08_RS22680	PF07690	Major Facilitator Superfamily
SH08_RS22685	PF06711	SH08_RS22685
SH08_RS22690	PF00860	Permease family
SH08_RS22695	PF01979	Amidohydrolase family
SH08_RS22695	PF13382	Adenine deaminase C-terminal domain
SH08_RS22700	PF07690	Major Facilitator Superfamily
SH08_RS22705	PF07690	Major Facilitator Superfamily
SH08_RS22710	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH08_RS22710	PF05231	SH08_RS22710
SH08_RS22710	PF07730	Histidine kinase
SH08_RS22715	PF00072	Response regulator receiver domain
SH08_RS22715	PF00196	Bacterial regulatory proteins, luxR family
SH08_RS22720	PF01842	ACT domain
SH08_RS22725	PF00205	Thiamine pyrophosphate enzyme, central domain
SH08_RS22725	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
SH08_RS22725	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
SH08_RS22730	PF08049	SH08_RS22730
SH08_RS22745	PF13939	SH08_RS22745
SH08_RS22750	PF07690	Major Facilitator Superfamily
SH08_RS22760	PF02656	SH08_RS22760
SH08_RS22765	PF02656	SH08_RS22765
SH08_RS22775	PF00884	Sulfatase
SH08_RS22775	PF16347	SH08_RS22775
SH08_RS22780	PF00474	Sodium:solute symporter family
SH08_RS22785	PF02311	AraC-like ligand binding domain
SH08_RS22785	PF12833	Helix-turn-helix domain
SH08_RS22790	PF02056	Family 4 glycosyl hydrolase
SH08_RS22795	PF00367	phosphotransferase system, EIIB
SH08_RS22800	PF02378	Phosphotransferase system, EIIC
SH08_RS22805	PF00392	Bacterial regulatory proteins, gntR family
SH08_RS22805	PF07702	UTRA domain
SH08_RS22810	PF02080	TrkA-C domain
SH08_RS22810	PF06826	SH08_RS22810
SH08_RS22815	PF00011	Hsp20/alpha crystallin family
SH08_RS22820	PF00011	Hsp20/alpha crystallin family
SH08_RS22825	PF07119	SH08_RS22825
SH08_RS22830	PF07676	WD40-like Beta Propeller Repeat
SH08_RS22830	PF12566	SH08_RS22830
SH08_RS22835	PF01494	FAD binding domain
SH08_RS22840	PF07690	Major Facilitator Superfamily
SH08_RS22845	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
SH08_RS22845	PF13378	Enolase C-terminal domain-like
SH08_RS22850	PF01081	KDPG and KHG aldolase
SH08_RS22855	PF05035	2-keto-3-deoxy-galactonokinase
SH08_RS22860	PF00392	Bacterial regulatory proteins, gntR family
SH08_RS22860	PF07729	FCD domain
SH08_RS22870	PF08282	haloacid dehalogenase-like hydrolase
SH08_RS22875	PF06078	Bacterial protein of unknown function (DUF937)
SH08_RS22880	PF12035	SH08_RS22880
SH08_RS22885	PF00204	DNA gyrase B
SH08_RS22885	PF00986	DNA gyrase B subunit, carboxyl terminus
SH08_RS22885	PF01751	Toprim domain
SH08_RS22885	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SH08_RS22890	PF02463	RecF/RecN/SMC N terminal domain
SH08_RS22895	PF00712	DNA polymerase III beta subunit, N-terminal domain
SH08_RS22895	PF02767	DNA polymerase III beta subunit, central domain
SH08_RS22895	PF02768	DNA polymerase III beta subunit, C-terminal domain
SH08_RS22900	PF00308	Bacterial dnaA  protein
SH08_RS22900	PF08299	Bacterial dnaA protein helix-turn-helix
SH08_RS22900	PF11638	DnaA N-terminal domain
SH08_RS22960	PF03400	SH08_RS22960
SH08_RS22970	PF07151	SH08_RS22970
SH08_RS22980	PF00871	Acetokinase family