SH08_RS00015 NONE
SH08_RS00020    3019 ..    3036 + -12.7  -5.83211   TTTCGCTAAAATAAG             GGCGGTC AGTT GACCGCC              TTTTTTCTTTTCGTA 100 51
        trmE    4472 ..    4507 + -15.6  -3.53712   TAAGTAACCGCGCTT    ACGAAGCCGCATTCTGA CTG TCAGA-TGCGGCTTCGC    TTCATTGTTACCACT 100 34
SH08_RS00030    4818 ..    4835 +  -2.1  -4.55209   CAGAGCCAAACCGAT             TAGATTCA ATG TGA-TCTA             TTTGTTTGCTATATC  60 63
        tnaA    6428 ..    6454 +  -8.1  -3.06492   TTAATTAATACTACA         GAGTGGCTA TAAGGATGT TAGCCACTC         TCTTACCCTACATCC  62 37
SH08_RS00040    7764 ..    7786 + -13.5  -3.12351   GGCTAAATCCTTCAA           GAAGCCAGC CATTC GCTGGCTTC           TTGCCTCTCAGGAAA 100 35
SH08_RS00045 NONE
SH08_RS00050   10101 ..   10112 +    -3  -3.44124   CTGTCCATCATTCCA                GTAA ATGA TTAC                 TCTTGTATTCATAAT  49 131
SH08_RS00055 NONE
SH08_RS00060   11498 ..   11522 + -12.2  -4.57837   GATCTAAATAAAAAA         CCCGCCA-GCA ATCA TGCATGGCGGG          TTTTTAACGCGCTAT 100 34
SH08_RS00070 NONE
SH08_RS00075   14249 ..   14259 +    -4  -3.62096   CTTTAAGTTAAGCGG                 GATA CTT TATC                 TTTGGGCTACTCAAA  54 30
SH08_RS00080   14901 ..   14928 +  -7.7   -4.2204   TAAATAATGAGAACA        GGCCGGA-GCGT AATTC ACACATCCGGCC        TTATTTCTTAAGCTT  76 46
SH08_RS00220   46908 ..   46922 +  -4.9  -3.25304   CACACAGACAATAAA               CGGCC CGCGC GGCTG               TTCATCGTAATCTTT  49 519
        trkD   51459 ..   51483 +  -9.3  -5.50723   AAATCTAACGCCAGA          CGCCTCCTT TCTTCAT AAGGGGGCG          TTTTTGTTTTCATGG 100 33
SH08_RS00240   52019 ..   52053 +  -5.6  -3.37612   GAATATCATTCTCTG     TGCTGGCGTGACGTTC TGA GGCCGTCATGGAAGCA     TTACTTCAGCTTAAA  57 7
SH08_RS00245 NONE
        rbsC NONE
SH08_RS00255   55518 ..   55540 + -13.4  -3.22906   AGAAAAGCAGGGCAC           GCGCCACCCT AAC ACGGTGGCGC           ATTTTATGGACATCC 100 108
SH08_RS00260 NONE
SH08_RS00265   57601 ..   57612 +  -2.2  -2.57757   TATAGTGGAATTGTT                CGAC AGTC GTTG                 TGCCTTCCATTCCTT  38 140
SH08_RS00280   61637 ..   61650 +  -2.3  -2.72471   AAGAAGCGTTCTTTG               CAGTG CTCA CACAG                ATTGTCTGATAGGAA  40 34
SH08_RS00285   61813 ..   61848 +    -7  -4.00532   AGTCACCTGCCTTAA    TATCTCAAAACTCATC TTCG GGTGATGTTTGAGATA     TTTGCTCTTTAAAAA  69 61
SH08_RS00290   64950 ..   64963 +  -2.4  -2.78679   AGAACGCAGAAGCGG               TCTG ATGAAA CAGA                ATTTGCCTGGCGGCC  41 89
SH08_RS00295   65103 ..   65118 +  -6.1  -2.82742   AAATTAAGCAGTAAG              CCGGT CATAAA ACCGG               TGGTTGTAAAAGAAT  55 44
SH08_RS00300   65211 ..   65230 +  -2.8  -2.79684   GAGTCCCGTCCGTTC            CGCCACC CTAATTA GG-GGCG            TAGTTCAATTGGTAG  42 21
SH08_RS00305   65307 ..   65326 + -10.8  -6.02914   CCCTGCCAGAAATCA            TCCTTAGC GAAA GCTAAGGA             TTTTTTTTATCTGAA 100 33
SH08_RS00315   66698 ..   66710 +  -6.9  -5.72616   GACGATTAATAAAAA                GGGCG AAA TGCCC                TTTTTTTATGTCAGT 100 32
SH08_RS00325   68712 ..   68735 + -13.8  -5.81032   CTTAACGAACTAAGA          CCCCCGCACC GAAA GGTCCGGGGG           TTTTTTTTGACCTTA 100 50
SH08_RS00330 NONE
        ilvM NONE
SH08_RS00340   71691 ..   71712 + -11.6  -3.53012   AATAAATACAAAAAA           TGGGACGG CACGCA CCGTCCCA            TTTACGAGACAGACA  89 36
SH08_RS00345 NONE
SH08_RS00350   75235 ..   75251 +  -9.4  -4.82901   AGAATGCCTCAATTA              GCGGCT CATGT AGCCGC              TTTTTCTGCGCACAC  95 118
SH08_RS00360   77768 ..   77796 + -16.1  -3.24825   AGAGGGAGAAAACAC        TCAAGGCCTTCTC CTG GAGAAGGCCTTGC        TATTAGTTGCGGTAC 100 81
SH08_RS00375   81029 ..   81055 +  -8.8  -3.73224   AATGCACTTCCAGCG        GCCAGTGGACA TAGCTC TG-CCACTGGC         TTTCCTGAGCAATAA  75 89
        trxA   84334 ..   84362 +  -4.5  -3.93038   GGTCAGTTGAAAGAG        TTCCTCGACGCTA ACC TGGCGTAAGGGAA        TTTCATGTTCGGGTG  61 2
SH08_RS00395 NONE
         rho NONE
SH08_RS00405 NONE
SH08_RS00410 NONE
SH08_RS00415   88355 ..   88380 + -18.3  -3.61517   AATAGCAACACTGCT         GCGGTGAGCGC AAAG GCGCTCGCCGC          TTATTCGAAGAGAAT 100 36
SH08_RS00420 NONE
        wecC NONE
SH08_RS00430   91843 ..   91853 +  -3.2  -3.08032   AGGGCGAGCGTTTAG                 GTCT GAA AGGC                 TAATTTTCAGCGGAG  46 12
SH08_RS00435 NONE
SH08_RS00440 NONE
SH08_RS00445 NONE
SH08_RS00450 NONE
SH08_RS00455 NONE
SH08_RS00460 NONE
SH08_RS00465   98981 ..   99006 + -13.3  -3.18764   TTCCTCTCTTTGTAA         AGCGACGGAGT GGTC ACTCCGTCGCC          TGTCTGCTTTTTTAT 100 43
SH08_RS00470 NONE
SH08_RS00475  100705 ..  100718 +  -2.3  -3.72695   CTCAGGTTCGAATCC               TGTCG GGCG CGCCA                TTTAGTCCCGGCGCT  49 12
SH08_RS00480 NONE
SH08_RS00485 NONE
SH08_RS00490  101087 ..  101102 + -11.8   -5.8901   CCGACCAATTTTGAA              CCCCGC TTCG GCGGGG               TTTTTTGTTTTCTGT 100 34
SH08_RS00495  102635 ..  102680 +  -7.7  -3.74077   TAGTCAGATTTAATC TGCGCGCGTG-GTGGATATTTT TTC AGGATCTCCATATACGCGTGCA TTTCGGTCTGTAGCG  72 200
        cyaA  111968 ..  112003 +  -3.2  -3.01924   AATATTTTTCGTGAT    GAACGTGCCGGA-AAGC GAG GCTTATCCGGCATGCAA    TCTTAGCGGAAACTG  44 27
SH08_RS00535 NONE
        dapF NONE
SH08_RS00545 NONE
        xerC NONE
SH08_RS00555  116194 ..  116227 +  -8.1  -2.93708   TATATATACCCAGCT     TTTTGGCGGAGG-GCG TTG CGCTTCTCCGCCCAAC     CTATTTTTACGCGGC  62 53
        uvrD  118426 ..  118438 +  -9.1   -3.9392   AACGTTGCCGGATGC                GGTGC TGC GCACC                TTATTTGGCCTAAAA  80 39
SH08_RS00570  119535 ..  119572 +  -6.4  -3.29144   GTCATCCAGGATCAA   CTCCTAAGGCTATC CCTTTTTGCT GATAGCCTTAGCGG    TTGTCAGCGACCTCA  59 111
SH08_RS00575  120655 ..  120679 + -15.1  -3.38991   GTAAAAAACGAGAGC          GGTGGCTTAGT CTG GCTAAGCCACC          TGTTATTCAAAGGCT 100 37
SH08_RS00600  124082 ..  124103 + -12.3  -5.27335   TTGCAGTTTCTCGCG           CAGGCGCTG AAAA TAGCGCCTG            TTTTTATTTCAGGCA 100 109
SH08_RS00605 NONE
SH08_RS00610  126665 ..  126701 +  -8.8  -4.58395   GACGCGTCTTCAGAG   TAA-GTCGGATAAGGCG TTTA CGCCGCATCCGACATTA    TTTTTCACGCATGCC 100 46
SH08_RS00620  128441 ..  128454 +  -2.3  -3.94868   CTCACCCAGCGGAAA               CCGCT CTAC AGAGG                TTTAAATTTCTTATG  53 7
SH08_RS00625  129303 ..  129349 +  -2.3  -2.86271   TGTCAACCTGATACT TCGCTACAATGG-ATACCCGTT AATC AAAGAGTTTTCCATTGTGGCGC TACTTATCATCACCA  41 61
SH08_RS00630  130522 ..  130535 +  -6.7  -3.08706   GATAAATTAATAGCG               TCTCG CTGG CGAGA                TCTTCCGGTGTAATT  59 305
SH08_RS00640  133588 ..  133612 + -14.3   -4.5442   CGGGGGTAAAATCCA          AACCGGGTGGT AAT ACCACCCGGTC          TTTTCTCATTACAGC 100 32
SH08_RS00650  135479 ..  135495 +  -9.4  -4.98672   CTTCTCCTGTCTGAA              GGCCGA CGCGT TCGGCC              TTTTGTATTTTTGCG 100 45
SH08_RS00655  137080 ..  137097 +  -2.7  -3.68256   CATCGACGCCCAATC             TGTTACA CTTC TGGAACA              ATTTTTTGATGAGCA  50 78
        ubiE NONE
SH08_RS00665 NONE
        ubiB  140155 ..  140176 +  -2.9  -4.51743   CATCGCTCAAGGCGG           GCCGTGTAA CGTA TAATGCGGC            TTTGTTTAATCATCA  61 47
        tatA NONE
SH08_RS00680 NONE
SH08_RS00685  141783 ..  141804 + -15.9  -2.63596   ACTGAAGAATAAATT           CAACCGCCC GTCA GGGCGGTTG            TCATATGGAGTACAG 100 29
SH08_RS00690  142869 ..  142879 +  -8.2  -3.23692   CGAAGTGGCTGACAC                 CGCG GGT CGCG                 TTGATAGTCGTGGTA  63 291
SH08_RS00700  144740 ..  144754 +  -2.7  -4.67651   TTTAACAACGGTAAA               AGCGC CTGAT GCGCG               TTTGTTTTGCCCTAT  64 17
         fre  145593 ..  145611 +   -11   -3.4252   TGGCAAACCATGCCC             GATGCGAC GCT GTCGCGTC             TTATCGTGCCTACAA  83 123
SH08_RS00720 NONE
SH08_RS00725 NONE
SH08_RS00730 NONE
        hemG  153530 ..  153548 +  -5.8   -3.4072   GAACAACGGCAAACA             CGCCGCCG GGT CAGCGGGG             TTCTCCTGAGAACTC  59 135
SH08_RS00740 NONE
SH08_RS00745  155487 ..  155499 +  -6.3  -3.57309   CTCAGGCCTACCAAA                TTTGC ACG GCAAA                TTTGAAGAGGTTTTA  63 28
SH08_RS00750  155629 ..  155662 +  -6.7  -4.49756   ATTAAATAAAAAATA     CTTCAGAGTGTACCT GCAA AGGTTCACTGCGAAG      TTTTGCTCTTTAAAA  76 52
SH08_RS00755  158695 ..  158705 +  -4.6  -4.11484   GGCTTAACCTTACAA                 CGCC GAA GGTG                 TTTTGGCGGATTGAG  63 12
SH08_RS00760  158904 ..  158953 + -24.7  -4.09117   GGAACTGCCAGGCAT CAAATAAAACGAAAGGCTCAGTC GGAA GACTGGGCCTTTCGTTTTATCTG TTGTTTGTCGGTGAA 100 28
SH08_RS00775  160655 ..  160665 +    -4  -4.12188   AATGATATCCTTCGT                 CATT CGT AATG                 TTTTCCGGATGATGG  61 75
SH08_RS00780 NONE
SH08_RS00785  162332 ..  162351 + -13.6  -6.01369   TGTAAATTACATAAA            GCCCGTGA ATAT TCACGGGC             TTTTTTTATTATTTA 100 46
SH08_RS00790  163930 ..  163940 +    -4  -3.80174   CTCATTCAGAGGCGA                 GTAA AAC TTAC                 TTATTCTGACGCTGT  57 59
SH08_RS00805  168242 ..  168267 + -19.1   -5.4505   GCTGAATATTTTAGC         CGCCCCAGTCA GTAA TGACTGGGGCG          TTTTTTATTGGGCGA 100 248
SH08_RS00815  170137 ..  170148 +  -3.6  -3.44051   AACGGATTGCCGCCG                TGGG CCTT CCCG                 TTCTGCTGATAACCC  51 39
SH08_RS00820  171810 ..  171865 +   -17  -3.21924   TTGTAGGCCGGATAA GGCGTTTA-CGCCGCATCAGGCATC TGAGCAT GATGCCTGATGCGGCGCTGGTCGCG TCTTATCAGGCCTAC 100 150
SH08_RS00850  178521 ..  178538 + -11.3     -6.13   TTTAGTCATAAAAAA             CCTGCCA GCGA TGGCAGG              TTTTTTTTTGCCTGT 100 49
SH08_RS00855 NONE
SH08_RS00860 NONE
SH08_RS00865  181830 ..  181861 +   -10  -2.75844   ACCGTATCAACCGTA      GGCCGGATAAGGCG TTTA CGCCGCATCCGGCA       GTTTCACATCAGAAG  72 76
SH08_RS00910 NONE
SH08_RS00915 NONE
SH08_RS00920 NONE
SH08_RS00925 NONE
SH08_RS00930 NONE
SH08_RS00935  196714 ..  196733 +  -7.8  -2.74756   AGAGTAGCTGATGGA            GAGGGGCG GTGC TGCCTCTC             TCATTCAGGTCATTT  61 34
SH08_RS00940  197771 ..  197792 +  -4.5  -3.12351   TGTAAGGAGCATAAG           GAATGACAA AAAT TTTTCATTC            TTGAATATAAAAAAC  51 20
SH08_RS00945  198278 ..  198307 + -10.7  -3.30124   GCTGACAACGTGCGC       GTTGTTCATGCCG GATG CGGCGTGAACGCC        TTATCCGGCCTACAA  76 67
SH08_RS00980  205123 ..  205157 +  -9.4   -3.5782   AGCAATTAATTAAAA     TAAGTCCTGCGAAATA TAT TAAATTGCAGGACTTA     TTCATTTCGTGAATT  78 32
SH08_RS00985  206657 ..  206687 +    -6  -2.70946   TCACCTTCGCCTTCG       CGGGCGATGATGCG TTG TGCTTCATCGGCGG       TAATATGGTGTTGTG  51 358
SH08_RS01030  215925 ..  215938 +  -3.9  -3.59979   ACGTTTTTTACGTGG               TTTTC CGTC GAAAA                TTTAAGGTAAGAACC  53 7
SH08_RS01035 NONE
SH08_RS01040  217834 ..  217844 +  -6.8  -2.66106   CTCAACACCGTTACC                 GGAC GGC GTCC                 TGCATTGTTCCACTC  52 98
SH08_RS01050  219755 ..  219773 + -12.4  -5.67063   AGCTTAAAAAATGAA             CCATCGCC AAC GGCGGTGG             TTTTTTTGTGATCAA 100 83
SH08_RS01060  220964 ..  220987 + -13.2  -3.94853   CCTTAATCCCCACAG          CCGGATGAAC TAAC GTTCGTCCGG           TTTGCTATTGAGTTC 100 49
SH08_RS01065  221833 ..  221844 +  -7.2   -3.4252   TCAAATGCCGGATGC                GGCG TAAA CGCC                 TTATCCTGCCTGCAA  66 95
        cpxP  224628 ..  224646 + -14.6   -5.9873   CACCATCCCTGTCTT             CCCCCACA TGC TGTGGGGG             TTTTTTTTATCCTCA 100 66
        fieF NONE
SH08_RS01090  226967 ..  226983 +  -9.4   -4.7497   TTGTCAGCAATATGA              GGCGGA TTTCT TCCGCC              TTTTTAATCCCTCAA 100 211
SH08_RS01095  228113 ..  228135 +  -6.9  -5.72622   AGGATAATTATCAAA           CCCGGTGGT TTCTC GCGACCGGG           TTTTTTATTTGTCAC 100 48
SH08_RS01100  229304 ..  229317 +  -2.3  -4.18197   CGCACCTTCGAATGC               CGCAG CACC CTGAG                TTTTCAGTACCGCGT  58 377
SH08_RS01115  231050 ..  231097 +   -16  -2.84566   CTCTTACTGCTATTT TTTTCCGGG-ATTGTTATTTCCA CGA TGCAAATGACAATACCCGGAAAA TCCTTCTGAACTCTT 100 53
SH08_RS01120 NONE
SH08_RS01125  232019 ..  232059 + -10.3  -3.35224   GCTCCGCTGTCATAT  GGCCCGGTCGGCGACGTAA ATG TTTCGTCATCTGCCGGGTC  TCTTTCAGCAACTGT  72 56
SH08_RS01150  237089 ..  237104 + -10.4   -4.3953   GTAACGCAGAAAAAA              GGCACC TTGC GGTGCC               TTTCTTATCATTCAA 100 87
        rpmE  245512 ..  245525 +  -9.5  -5.64274   GGATTTCCGAAAAAA               GCGCC GCAC GGCGC                TTTTTTTGTGCCTGA 100 45
SH08_RS01205 NONE
        metL  250683 ..  250705 +   -12  -5.42605   AGTTTATATTTGCAG           TCCGGTTTGC TTT GCATACCGGA           TTTTCTTTTTCTTAC 100 176
        metF  251846 ..  251884 + -10.4  -2.60392   GCTGCCTCGAAATGA   GGGCGGGAAAATAAGGTT ATC AGCCTTGTTTTCTCCCTC   ATTACTTGAAGGATA  74 100
SH08_RS01225  254289 ..  254322 + -19.7   -3.9122   GCTGTAATCTGACCC     CGTTCAGCGGCTGCT TGCT GGCAGTCGCTGAACG      TTCTTTACCAGCGTA 100 34
SH08_RS01230  255556 ..  255590 +  -3.5  -3.80083   AGGTTTCCAGATTAG    GCACCC-GACGGTGAT CGAT GTTGCTGTCCGGGCGC     TTTAACTTCCATTTT  56 303
SH08_RS01260 NONE
SH08_RS01265  262218 ..  262235 + -10.5  -3.27525   CGCTTAAGTTCTTCT             CCCGCTC GCAA GGGCGGG              TTCGCTTTCCCACAG  78 34
        pflD NONE
SH08_RS01275 NONE
SH08_RS01280  266235 ..  266259 +  -6.3  -4.52347   TATGCGTGGGCCGCG          TCGGGCGACGT GTT GCTTCGCCAGA          TTTTGATATTGTTTG  74 516
SH08_RS01310 NONE
SH08_RS01315  275063 ..  275086 +  -5.2  -3.28001   AGCTTAAGTTTTGTT          GGCCGG-AGGC GCA GCTTTCCGGCA          TTGAATTTCAAAATA  55 34
SH08_RS01320  276513 ..  276531 +  -9.5  -5.24129   TATGTATAAATTTGA             GCCTGGC TTATC GCCGGGC             TTTTTTATGGCAAAA 100 50
SH08_RS01325  277841 ..  277863 +  -5.7  -4.11216   AATACCCAGAATCTC           TTTTGTTTC CCGAT GGAACAAAA           TTTTCAGCGTGCCCA  65 194
SH08_RS01335 NONE
SH08_RS01340  280401 ..  280432 + -11.6  -4.41494   TGCTGAGTAATCGGT      ATTATGCCGGATGC TGGC GCATCCGGCATGGG       TTTTACTTCGCGGTC 100 31
        btuB  283756 ..  283791 +   -14  -3.41125   CCTTCTGAACCACGT    CCCACCG-TGCTGGTGT TTG ACTCCGGCGTCGGTGGG    TTGTCGGTCTATGAC 100 33
SH08_RS01355  284656 ..  284674 +  -5.8   -3.4072   GAACAACGGCAAACA             CGCCGCCG GGT CAGCGGGG             TTCTCCTGAGAACTC  59 131
SH08_RS01360  286486 ..  286499 +  -2.3  -2.72471   AAGAAGCGTTCTTTG               CAGTG CTCA CACAG                ATTGTCTGATAGAAA  40 34
SH08_RS01365  286662 ..  286697 +    -7  -4.00532   AGTCACCTGCCTTAA    TATCTCAAAACTCATC TTCG GGTGATGTTTGAGATA     TTTGCTCTTTAAAAA  69 61
SH08_RS01370  289797 ..  289810 +  -2.4  -2.78679   AGAACGCAGAAGCGG               TCTG ATAAAA CAGA                ATTTGCCTGGCGGCA  41 84
SH08_RS01375  289934 ..  289983 + -24.7  -4.09117   GGAACTGCCAGGCAT CAAATAAAACGAAAGGCTCAGTC GAAA GACTGGGCCTTTCGTTTTATCTG TTGTTTGTCGGTGAA 100 28
        murB NONE
SH08_RS01385  292247 ..  292261 +    -5   -2.6472   GAGTATTCGCTCCCC               TGCAAA TTA TTTGCG               TAGTCTGACCTCTTC  48 48
SH08_RS01400 NONE
SH08_RS01405  293789 ..  293809 +  -2.5  -3.05816   GCTTACCGGCTCGAA            TAAAGAGAG CTT CTCTCGATA            TTCAGTGCAGAATGA  43 81
SH08_RS01410 NONE
SH08_RS01415  294057 ..  294071 +  -7.8  -2.57944   TTGCATTCAACAAGT               CGGGCA TGT TGCCTG               GTTGATGTGGTGATA  60 76
         tuf  295329 ..  295368 + -13.6  -3.72576   AACATTTGACGCAAT  GCGCACTAAAAGGGCATC ATTT GATGCCCTTTTTGCACGC   TTTCGTACCAGAACC 100 49
        secE NONE
        nusG  296500 ..  296538 + -13.3   -4.8543   GCGATTTAATCGTTG   CACAAGGCGTGAGATTG GAATA CAATTTCGCGCCTTTTG   TTTTTATGGGCCTTG 100 60
SH08_RS01435 NONE
SH08_RS01440  297769 ..  297805 +  -6.6  -2.87136   AAACTAATGCCTTTA   CGTGGGCGGTGATTTTG TCTA CAATCTTACC-CCCACG    TATAATGCTTAATGC  57 34
        rplJ  298663 ..  298676 +  -3.8  -4.07746   GCGATGCGAAAGAAG               CTGC TTAATC GCAG                TTATCTTTTTAACGC  60 18
        rplL  299142 ..  299167 + -17.7  -4.64766   AGAAATCAGGCTGAT         GGCTGGTGACT TTTT AGTCACCAGCC          TTTTTGCGCTGTAAG 100 65
        rpoB  303470 ..  303497 + -15.6  -2.65298   CGCTCAAACAGGTCA        CTGCTGTCGGGT TAAA ACCCGGCAGCGG         ATTGTGCTAACTCCG 100 45
SH08_RS01460  307777 ..  307790 +  -9.5  -5.60993   CAAATAACGTAAAAA               CCCGC TTCG GCGGG                TTTTTTTATGGGGGG 100 52
SH08_RS01465  308508 ..  308523 + -10.4  -3.53343   CTCAAAATAACAAAA              CCCACC TTAA GGTGGG               TTTCGCCAGAGAATT  80 31
        nudC NONE
        hemE  316952 ..  316963 +  -2.2  -2.63382   TCTGAACAGTATCAC                CGCT AAGG AGTG                 ATTATGGATCTCGCG  40 20
SH08_RS01515  317652 ..  317664 +  -4.8  -3.35597   AATTCAGGTAAACTG                CGGA TAATT TCCG                TATTTGAGAACTCAA  53 39
SH08_RS01520  318392 ..  318404 +  -4.1  -3.65351   GTGTATGCAGGAGAG                TGCTA TTC TGGCA                TTTCCGTCGCACTCG  54 146
SH08_RS01525 NONE
SH08_RS01530  319679 ..  319690 +  -5.8  -3.57263   TCACCAGTTGCTGTT                GCAG TGCG CTGC                 TTTGAGCGTAAAAGT  60 266
SH08_RS01540 NONE
SH08_RS01545  323134 ..  323154 +  -3.3  -4.05788   AGCGCGTTCATCCCA           CTCGGACG TTTTCT CGTCC-AG            TTTGCTTTCACAGGC  58 337
SH08_RS01570  327886 ..  327899 +  -2.3  -2.72471   AAGAAGCGTTCTTTG               CAGTG CTCA CACAG                ATTGTCTGATAGAAA  40 34
SH08_RS01575  328062 ..  328097 +    -7  -4.00532   AGTCACCTGCCTTAA    TATCTCAAAACTCATC TTCG GGTGATGTTTGAGATA     TTTGCTCTTTAAAAA  69 61
SH08_RS01580  331128 ..  331138 +  -4.6  -4.11484   GGCTTAACCTTACAA                 CGCC GAA GGTG                 TTTTGGCGGATTGAG  63 12
SH08_RS01585  331350 ..  331370 + -11.8   -5.1287   ATCAAATTAGAAAAA            CCCCGGTC CATAA GGCCGGGG            TTTTTTGCATATCAA 100 41
SH08_RS01590  332117 ..  332127 +  -2.4  -2.70932   ACATAAATCCAACCG                 GCTG ATC CCGC                 TCATTAACCGCGACC  39 348
SH08_RS01600  333432 ..  333447 + -10.4  -5.63517   CAGCACCTTACCTCA              GGCACC TTCG GGTGCC               TTTTTTATTTCCGAA 100 71
SH08_RS01605 NONE
SH08_RS01610  336670 ..  336683 +  -8.1   -3.4252   CACGATGCCTGATGC               GACGC TTGC GCGTC                TTATCATGCCTACAG  68 105
        aceK  338753 ..  338765 +  -6.3  -4.04318   GATAAACCGTCTCTA                CAACA TTT TGTTG                TTTATGCTGTATCGC  68 269
        metH  345717 ..  345747 + -10.4  -4.29106   CACTTTTCCTTACAA       CAAACAGGGCGCTC AAT GAGTGCCCTGTCTC       TTTATTAATATGAAA 100 54
SH08_RS01635  347602 ..  347624 +  -7.7  -3.17075   GGCACTATGAACAAG           ATGCCGGAT CATGC ATCCGGCAA           TTCACTTAAAAACGG  63 88
SH08_RS01645  349547 ..  349558 +  -2.2  -3.44848   TGGATTAGCGCCTGC                CG-CG CGT CGACG                TATTTGCTGACCAGC  47 169
         pgi  353612 ..  353658 + -14.3   -2.5294   TGTAGGCCGGATAAG GCGTTCACGCCGCATCCGGCA ACCGA TGCCTGATGCGACGCGGTCGC GTCTTATCAGGCCTA  93 53
SH08_RS01675  355171 ..  355192 + -11.7  -3.32343   TGAAGGGATTAACCA           TAACCACAC TCCG GTGTGGTTA            TTCTGCCCCTCTGGA  86 94
SH08_RS01680 NONE
SH08_RS01685 NONE
SH08_RS01690  358696 ..  358723 +  -8.5  -3.56142   CTAAGTCATGGGAAA        GGTGCCAGT TTTCGCACTC ACTGGCACC         TTCATTCTTAATGGC  71 37
SH08_RS01700  359134 ..  359154 +  -5.4  -2.90714   CGCCGCCAGGCGCGG            CTTATCCG GCCTA CGGGTAGG            TATATCCGGCTTTGG  52 6
SH08_RS01705  359736 ..  359746 +  -2.4  -4.58419   TGGACAGGAAGATTA                 CAGC GTA GCAG                 TTTGTTGTGTTTTCT  63 72
SH08_RS01735  366876 ..  366886 +  -6.8  -2.62184   ACAAAACACACAAAG                 CCTG TCA CAGG                 TGATGTGAAAAAAGA  56 48
        lamB  368335 ..  368382 + -12.2  -3.53811   GATGCGACGCTTGCG CGTCTTATCAGGCCTACA ACGGCTGTCAAA TGTAGGCCGGATAAGGCG TTTACGCCGCATCCG  91 95
SH08_RS01745  369461 ..  369480 + -11.4  -5.71983   GATTTTGCAACAACT            GGTGCGTC TCCT GGCGCACC             TTTTTTTATGCTTCC 100 58
SH08_RS01750 NONE
SH08_RS01755  371351 ..  371361 +  -3.2  -3.66156   GTTTTACCACTTCAT                 GCGA TTG TTGC                 GTTTTTGTTGCGTAT  51 139
        ubiC NONE
        ubiA  372855 ..  372872 + -11.3  -4.35604   TGATGATGTAAAAAA             GCCGGAT GATC ATCCGGC              TTTCTTCTGGGTTGC 100 38
SH08_RS01775  375965 ..  375986 +  -2.4  -4.33851   TTTTGGATAACCCTT           CCAGA-ATT CGATA AATCTCTGG           TTTATTGTGCAGTTT  58 31
SH08_RS01780  376691 ..  376714 +   -16  -4.94262   AACATATCTCTGAGA          CCGCGATGCC GCCT GGCGTCGCGG           TTTGTTTTTCATCTC 100 39
SH08_RS01785  378134 ..  378154 +  -2.6  -2.69964   CTACACTTAATCTCA            CGTTCA GAAGAAAAG TGAACG            TACTCTCATTCACAA  41 84
SH08_RS01790  378712 ..  378724 +  -9.1  -3.28791   GAGCACATAACTGTT                GGTGG ATT CCACC                TTATGCACAAAACCT  69 337
SH08_RS01800 NONE
SH08_RS01805  380302 ..  380323 +  -9.5   -5.4251   AGGCATTATATAAAA           GGACCCAAT ATTT ATTGGGTTC            TTTTTTCTCTATCAA 100 67
SH08_RS01810  381691 ..  381714 + -13.1  -4.43681   TAGTCAAATTCACCA          CGCCCTGCG CACCGT CGCGGGGCG           TTTTGCTGTTAAATC 100 56
        pspG  382171 ..  382195 +   -10  -4.77775   CGAACTATAAAAAGA          AAGGGCTTCC CAGGT GGAAGCCCTA          TTTCTTTTATGGAAT 100 160
SH08_RS01825 NONE
         alr  385927 ..  385947 +  -3.9  -3.98661   TGCTCTTATAAAGGT            CGTGCCTCT GGC GGATGTACG            TTTGTCATGAGTCTC  58 137
SH08_RS01835  387511 ..  387523 +  -4.9  -2.78935   TCGGGTTTGTTACGA                TAGAA TAT TTCTA                TATCCTCAAGAATAT  46 275
        aphA  389082 ..  389116 +  -6.5  -5.52384   AATTCAGAATACTGA    CAG-A-GCGGGAGAGCG TGA TGCTCTCCCGAATGCTG    TTTTTTTAATCACAC  91 26
SH08_RS01850 NONE
SH08_RS01855  390025 ..  390057 +  -4.8  -2.93393   ATCGGCTTAAGGAAG     CGT-GCCGTGTGTGA TGCT TCGCACTCCGCGACG      GTTTCTGGCGTACCG  50 82
SH08_RS01865  393688 ..  393704 + -10.1  -3.39505   AGCCATAAAAAAGAA              GCCTCCG TTA TGGAGGC              TTCTACGTATCAGGT  76 98
SH08_RS01875  396168 ..  396192 +  -6.5  -2.80816   GCCAGTAACAGGCGG         CG-TTGGCGA ATGTAA TCGCCAAGCG          TCTGATGCGTCACCG  51 182
SH08_RS01885  396884 ..  396908 + -14.4  -4.67651   GGAAGATGAACAAAA          CTAAAGCGCC ACAAG GGCGCTTTAG          TTTGTTTTCCGGTCT 100 22
SH08_RS01890  398798 ..  398829 + -12.4  -4.37658   TCTTTCATCGGATTC      TGAAAACGGGTGGC AATG GCTGCCCGTTTTTA       TTTTCTCCGCACATT 100 41
SH08_RS01895  400624 ..  400641 +  -9.9   -3.5774   AGGTAATCTGAAAAA             GGTGCAA TCTT TTGCACC              TTTAACAGGTTAGCT  80 66
        nrfA NONE
SH08_RS01925 NONE
SH08_RS01930 NONE
SH08_RS01935  410427 ..  410440 +  -2.3  -2.98304   GTATTCCTTCCTGAA               GTCGG TTTT CTGGC                GTTGTTGTTAAGTCT  42 66
SH08_RS01940 NONE
SH08_RS01945 NONE
SH08_RS01950  413207 ..  413219 +  -3.4  -3.84246   CAAATAAAAATCTTT                CCAT AACAA ATGG                TTATTCATTAATCCT  53 139
SH08_RS01955  415240 ..  415274 + -10.7  -3.08867   CGCATCCGACATCAA     TGCCTGATGCGACGC TTGCC GCGTCTTATCAGGCC     TATCTTAACCGTTGG  79 517
SH08_RS02030 NONE
SH08_RS02035  433473 ..  433485 +  -6.2  -3.53811   GACAGCCACGCCACC                CGGC TGTGT GCCG                TTTCCAGCAGATAAC  58 458
SH08_RS02120 NONE
SH08_RS02125  449184 ..  449242 +  -3.2  -3.62522   AACTGCCCAATTCAG GCGTCAACTGGTTTGATTGTACATTCC TTAACC GGAGGGTGTAAGCAAACCCGCT-ACGC TTGTTACAGAGATTG  51 128
SH08_RS02130  450892 ..  450908 +    -3  -2.58999   TCTTATCAGGCCAAT              TGAACT CTTAA GGTTCA              CTTAATCTCTGACGC  42 70
SH08_RS02135  451079 ..  451096 +  -6.3  -4.07568   ACCCAGGCCCGCGTG             CCGG-AAG TCT CTTGCCGG             TTTTGCAGGAAAAAC  68 56
SH08_RS02175  460653 ..  460665 +  -3.3  -3.88291   TTTACTGCTGCTTCA                CGCAG GAT CTGAG                TTTATGGGAATGCTC  53 14
SH08_RS02180 NONE
SH08_RS02185  463655 ..  463685 +  -3.3  -2.52519   CAATAGCTAACGAAA       ATGGCCTGATG CGATATGTT TATCAGGCCAC       GTCTTAATGTAATGC  42 47
SH08_RS02205  468382 ..  468406 +  -4.9  -4.07568   TCCACTGGCACAGTG          TGCGTAACGTC TGC GGCGTTAAGCC          TTTTGGCAAGCGACG  62 226
SH08_RS02220 NONE
SH08_RS02225  471490 ..  471517 +  -6.4  -2.98491   CCATCATCTTATTCC        TCAGTGTTCTTA AGAT TAAGATCATTGA         TGTATGATATGAATT  56 315
SH08_RS02230 NONE
SH08_RS02235  472003 ..  472026 + -15.4  -3.35813   TTGCGGAACGATGAA          CGAAGCAGTC GCCT GACTGCTTCG           TTCATTAAAGTGAAA 100 104
        fxsA  487992 ..  488024 +  -4.8   -5.0925   GGATTAATGTCGAAA      CGCCGGATTATG TGGTTATGC CATTTTCCGGCG      TTTTTCGTTTTGGCA  80 34
       groES NONE
       groEL  491544 ..  491567 + -12.4  -5.50723   GCAGAAATAAACAAA          CCCCCGGGCA GAAA TGTCTGGGGG           TTTTTCTTTTGGTCA 100 55
SH08_RS02315  492382 ..  492393 +  -5.8  -4.02911   GAAATCAAGCATTCG                GCGA GTGA TCGC                 TTCTATTTCTTTACC  68 402
SH08_RS02330  495113 ..  495144 +   -13  -3.65046   GCGTGAAGTAATGCG      GTTGTGGTGCGGCC TGCA GGCTGCACCATCAC       TTATTCAGGTCAGAG 100 30
SH08_RS02335  495269 ..  495281 +  -3.3   -2.6432   TCGGCAACTCCATCT                CTCGC GCT GCCAG                CTAATTTTTCTTCTC  42 9
SH08_RS02340  495546 ..  495577 +    -8  -5.26316   GCGCAGCAATAAGCA      ATAACGGTACGACA GCTG TGTCGTGCCGTTTG       TTTTTTCTGCGATAG 100 29
SH08_RS02345  496316 ..  496326 +  -3.2  -3.42197   TCTGCTGCCACATTC                 CTCT GTC AGGG                 TTATAGCCTTTATTA  49 306
SH08_RS02380  502609 ..  502635 +  -7.3  -3.05596   GTATTGGTTTTTACG        CTGC-CTGCTCA ATGT TGCGCAGTGCAG         TTCAGTGGGCACGTG  61 171
SH08_RS02385  504171 ..  504194 +  -3.7   -2.8655   CAAAAAATCCGCAGT          GGGCGGTGG AATAAC CCGATGCCC           TATCGTCTACCTGAC  45 12
SH08_RS02390 NONE
SH08_RS02395  505215 ..  505228 +  -5.9  -2.78384   TCTTCGCTATTGGCA               TCGGC AGGG GCCGG                TATCGTCAACACCAC  51 379
SH08_RS02415  511035 ..  511049 +  -4.2  -2.53759   AATCCACTTGCGGCG               GCGTGA TTT TGACGC               TAAATTGAACGTCTT  45 68
SH08_RS02420 NONE
SH08_RS02425 NONE
SH08_RS02430  511524 ..  511551 +  -3.4  -5.27206   CTCTCAATAAAATAT        CCA-CAGCGACGC GAT GCGTTATTGCTGG        TTTTTGTTGTCTCTG  79 48
SH08_RS02440 NONE
SH08_RS02445 NONE
SH08_RS02450 NONE
SH08_RS02455 NONE
        miaA NONE
         hfq  519460 ..  519492 +  -7.1  -2.54504   CGGGCTGTTTTTTTA     CA-CGGGGAGC-CAG CGATC CTGCGTTCCCCGCTG     ATCTATTTAGAGGGT  58 46
SH08_RS02470 NONE
SH08_RS02475 NONE
SH08_RS02480  523177 ..  523203 + -13.1  -5.38839   TACAGGTCAATAAAG        CCACCG-CATCC TCAG GGATGTCGGTGG         TTTTCTTTTTCTATA 100 55
SH08_RS02485 NONE
SH08_RS02490  524883 ..  524917 + -11.6  -3.10975   CAGTGTGATACATTG    CTGTGTCGGGTAAGC CATTAC GCT-ATCCGACACAG     TGTTAAATCCTCGCT  84 80
SH08_RS02495 NONE
SH08_RS02500  527945 ..  527964 +  -8.6  -3.20723   GCAGAGTGATCAATA            CCCTCTTT AAAA GAAGAGGG             TTAGATTGCTGACAA  67 32
SH08_RS02505  528870 ..  528887 +  -9.9  -6.32216   CAGAATTATGAAAAG             CCATCCA GATT TGGATGG              TTTTTTTTTGTCTAT 100 46
SH08_RS02510 NONE
SH08_RS02515  530100 ..  530126 + -12.4  -2.79004   GGGCGAGTAATTTTT         TTGCCAGCCT CGCTAAA AGGCTGGCAA         CTATTTTAAGGATAA  89 31
SH08_RS02520 NONE
SH08_RS02525 NONE
SH08_RS02530 NONE
SH08_RS02535  533070 ..  533099 + -13.7  -3.14132   TCTGTCATGAATCCA       TGGCAGTGACCAT ACTA ATGGTGACTGCCA        TTGATGGAGGGAGAC 100 61
SH08_RS02540  535104 ..  535146 +  -3.5  -4.98531   GGATAAGTCACTAAT TGCAGC-GAGGGTGAGGCAA GTAA TTGTTTCATCGTCAGCTCCA TTTTTCGTTTCCCCA  76 386
SH08_RS02555  537029 ..  537041 +  -4.7  -3.57792   CGCCCGGATTAACCA                GCTGC GAG GCCGC                TTTAGCGATACGTAC  55 510
SH08_RS02570  540213 ..  540227 +  -2.8  -4.48987   AACTGGCAGAACAGT               CTGCTT AAT AAGGAG               TTTTGATTATGACCG  61 18
SH08_RS02575 NONE
SH08_RS02580 NONE
        ulaD NONE
SH08_RS02590 NONE
        araD  543437 ..  543449 +  -9.1  -3.46435   TACGTGGTAGTACGT                TGCGC CTT GCGCA                TCTGTTTCTTCATTT  71 233
SH08_RS02605  543823 ..  543833 +  -2.4  -3.27525   AGGGGAGATTTATTT                 CGGC TCT GCCC                 TTGAGTTTAGCGAGG  45 11
        rpsF NONE
SH08_RS02615 NONE
        rpsR  544912 ..  544922 +  -2.4  -2.50307   TCGCCATCAGTAATC                 GGTC ACG GTCC                 ATTAATACGACTTTG  39 28
        rplI  545421 ..  545449 + -16.1  -3.33352   TATTCAACGAGACGT        AAAAACGCCGACC ATT GGTCGGCGTTTTG        CTTTCTATTTTTCGT 100 46
SH08_RS02635  547001 ..  547031 +  -7.4  -4.13014   GTATCAATGGTTAAG       CCCGTCACCACGCC GCT GGCGTTCTGGCGGA       TTTTCACCATCTGCC  74 88
SH08_RS02645  548577 ..  548587 +    -4   -3.1372   AAATTAACATTAGAT                 CTAA ATC TTAG                 TATTCATCCCGCGTA  49 204
SH08_RS02650  550132 ..  550156 + -16.5  -4.19817   TAACCGCATTATCAT          GCTGGATGGCG CAA TGCCATCCAGC          TTTTAGATCACTCAC 100 38
SH08_RS02670  553406 ..  553432 + -12.3  -2.60798   AAGATGCGCCAGCAT         CGCATCCGCCA ATAAA TGCCGGATGCG         GTTGATGATTTATAG  88 95
SH08_RS02680  556341 ..  556383 + -10.1  -3.86346   GTCTATTTACTAAAT TCA-GATGGCAGAAACAG TGTATTTC CTGATTCTGCCATCCTGA TTTCTCCCAACCTAA  84 28
SH08_RS02685  557489 ..  557519 +    -7  -2.53831   AACTCAGAGACTTAA       TTCCCCTATC CCATAGATAAC GATAGGGGAA       AATTATTTTTGCAGA  55 26
SH08_RS02695  558678 ..  558698 + -16.9  -3.50335   TATGCAGTAATAAGA            CGGCTCCTG ATT CAGGAGCCG            TTGATGTTTCTGGGG 100 67
SH08_RS02710 NONE
SH08_RS02715  562940 ..  562951 +  -4.4  -2.69546   ACAGTTTTACATCGG                TCTG GGGC CAGA                 ATTATGAGTTTATGG  45 7
SH08_RS02720 NONE
SH08_RS02725  567086 ..  567110 + -10.8  -5.00616   ATAAGTAACCATATG         CATACGCCACC TTCG GGTGGCGT-TG          TTTTTTGCGAGACGA 100 33
SH08_RS02730 NONE
SH08_RS02735  568191 ..  568209 +  -5.2  -4.07568   ACCAGTTTCGCATCT             TCACCGGC TTC GTCGGTCA             TTTTCAGAACGCCAA  65 331
SH08_RS02745  569844 ..  569858 +  -7.1  -3.42996   ACTGAAGCCTGATGC               GACGC TTACC GCGTC               TTATCATGCCTACTG  66 108
SH08_RS02750 NONE
SH08_RS02755 NONE
SH08_RS02760  573812 ..  573831 +  -6.5  -3.40371   TTCTTCACCCCGTTC            GGAAACT TAATGT AGTTTCC             TTCGTTGATGGAGTA  56 416
SH08_RS02770  576032 ..  576061 + -13.5  -2.74792   ATATAGTATGCGTAG       GCCGGATAAGGCG TTCA CGCCGCATCCGGC        ATTTGAGCATAGTGC  93 56
        pmbA NONE
SH08_RS02785  578706 ..  578739 + -14.7   -3.4072   ATCGTTAATTCCTCA     TTTCCCTGTTGCCTG CACT CAGGTAACAGGGAAC      TTATCATCGCAAATG 100 33
SH08_RS02815  589338 ..  589357 + -10.7  -3.65827   TGTCATCAGACTTAA            TCCGGGC ATGATA GCCCGGA             TTTCCATCAAGATTA  84 199
SH08_RS02840  592138 ..  592163 +  -6.1  -2.60723   CGTGAGTAAACAAAA         CCCAGACATCA TGGA TAATGGCTGGG          CTTAATTGAGCGTAG  54 475
SH08_RS02855 NONE
SH08_RS02860  594164 ..  594195 +  -7.4  -3.85698   ATGGCGTGATGACTT      TTCGCCGTAAAT AACTCAAG GTTTACGGCGAG       TTTGTGAAAAGAGCG  70 32
SH08_RS02865  596103 ..  596133 +  -9.8  -3.87815   TGCATAAAATAATGT       GATGCCGGGA TGGTTTGTATT TCCCGGCATC       TTTATAGCGATAGCA  84 34
SH08_RS02875  597847 ..  597871 + -15.7  -5.47399   TTGTTAATGTTCGAA          TGCCCGCGAGT TGA ACACGCGGGCA          TTTTTTTAGAGTTCG 100 140
SH08_RS02885  599781 ..  599800 +   -15  -3.72073   GTAAGAGATAAAAAA            GGCCGGAG CATG CTCCGGCC             TTCGTTTTCATCACT 100 37
SH08_RS02905 NONE
SH08_RS02910  607257 ..  607280 +   -14   -3.9461   AACCGAATGAACGAA          TAAAGGGAGC GAAA GCTCCCTTTA           TTATTGTTAGCAAAG 100 39
        idnK  614382 ..  614397 +  -6.8  -3.05562   GCCAGTGCTTTCAGT              GCCTGCG GAT CGC-GGC              TATTCACCACTTTAT  56 378
SH08_RS02950  615347 ..  615362 +    -9  -5.64274   AAAAGTATGTAAATA              GACCTC AACT GAGGTC               TTTTTTTATGCCTGA 100 40
SH08_RS02955  616787 ..  616806 +   -15  -2.88832   TTAAAACAGTAATCA            TCCCGGGC AAAT GCCCGGGA             ATTATTCTAGGATTA 100 29
SH08_RS02965 NONE
SH08_RS02970  618533 ..  618544 +  -2.2  -3.06501   GGTTAGTTATCTTCG                TCTG TCAG CGGA                 TTGAATGGCGGTATA  42 215
SH08_RS02985  620061 ..  620079 +  -5.3  -3.53343   GCCCGCATAACCCGT             TGACTTC CTGAA GAAGTCG             TTTCAGGGAGAGATT  57 15
SH08_RS02990  620437 ..  620452 +  -5.4  -3.85698   TCTTCGGGTAAGTGA              TACCTG CCGT CAGGTG               TTTGTGCACCGGGCC  61 116
SH08_RS02995  620935 ..  620964 +  -9.3  -4.59109   CATCTTGGTTCTGTA       ATGCCAGTCAGTT AAGC AACTGACTGGCTC        TTTTTCGGGGCTGTG 100 42
SH08_RS03005 NONE
SH08_RS03010  625257 ..  625282 +  -5.4  -4.62984   AATGTAAAAACTATA         CGCCTCTTGA TTTAAT TCAGGAGGCC          TTTTATGTATGATCA  73 34
SH08_RS03020 NONE
SH08_RS03025  626598 ..  626626 +    -4  -3.91897   TCCCATGTCAGTGAT        TTTCTGAGTT CTGACGGTA AACTCAGGAA        TTTGTCGGTAAGAGC  59 317
SH08_RS03040  628713 ..  628723 +  -5.4  -2.94695   CCAGCCGCAGTACAG                 GTCA CGA TGAC                 TCTGGTTAATGATAC  52 102
SH08_RS03045  629167 ..  629189 +  -6.2  -5.21709   ACCAGCTCCGTGAAT           GTCCGCTCTG GCA CAGAGCGAAA           TTTTTTGATCTCCCC  87 216
SH08_RS22960  637835 ..  637849 +  -7.8  -2.64616   TTCTGAGCCTGCTGT               CGGCCT TTG AGGTCG               TGGTATAGATGACGG  60 3
SH08_RS03095  638145 ..  638168 + -12.5  -3.95647   CTAATCAATAAAATC          CTGCCCCAT ATCTAC ATGGGGCAG           TTGTTCATTCTTTTA 100 103
SH08_RS03185 NONE
SH08_RS03190  655301 ..  655311 +  -4.6  -4.63542   AATAACAACGGTTTA                 TGCG GTG CGCG                 TTTTTCACCCTTGTG  71 452
SH08_RS03210  658924 ..  658934 +    -4   -4.7878   AAAAACTAAAGATCT                 TAGT TTA ACTA                 TTTGTTTTATAAATA  71 87
SH08_RS03220  660765 ..  660794 + -10.9  -5.10064   TTAATGTAATTGACT       GATAGCCACATCAC TCC GTG-TGTGGTTATC       TTTTTATCTATTGGG 100 388
SH08_RS03225  661911 ..  661925 +  -2.8  -2.75536   ACAAAGTGTACAGAA               CGAC TGCCCAT GTCG               ATTTAGAAATAGTTT  42 460
        fimA  662602 ..  662615 +  -3.1  -3.83026   TATTTCTATTAGCGT               CGTTG CTGC CAATG                TTTGCTCTGGCCGGA  53 121
SH08_RS03240 NONE
SH08_RS03245 NONE
SH08_RS03250 NONE
SH08_RS03255 NONE
SH08_RS03260 NONE
SH08_RS03265  668762 ..  668788 + -14.4  -3.10537   AGACTTTGTCATCAG         TCTGAGCCTGCC ATT GGCAGGCTCTGG         TGTCCTTTTACGCTA 100 234
SH08_RS03275 NONE
SH08_RS03280  671670 ..  671694 +   -15  -3.58329   AGCCGTTAATATCCA          CCGGCATGGC TGCGC GCCGTGCCGG          TTCCTTCTTCCTTGC 100 32
SH08_RS03285  673229 ..  673260 + -12.5  -4.94243   TACCCTACAGACTTA      CTGGTCAATCAAA CTGATA TTTGGTTGACCAG       TTTTCGTTTTTTTGC 100 50
SH08_RS03295  674206 ..  674230 +  -9.3   -4.2528   GACTTATTATAATAA          GCGCAAGGG TAAACGT TCCTTGCGC          TTTCTTAAATTAAGA  88 39
SH08_RS03315 NONE
        iraD  676316 ..  676338 +  -4.1  -3.05384   ATGCATAGGCCTGAA           TCGGGATCA CCAGT TCGTCCCGA           TTCAGTACAACGAGC  46 113
SH08_RS03345  680422 ..  680441 +  -5.6  -3.16676   GCCGCGCCGCAGAGA            GTGGCGCT GGCA AGCGCCGA             TGTTCCATTGCTGAG  52 120
SH08_RS03385  688893 ..  688906 +  -5.3  -2.60723   GGCATCCGGCATGAA               CAAAG CGTA CTTTG                CTTAATTCAGGCTGG  49 157
SH08_RS03395  690903 ..  690939 + -11.2  -2.64981   CTCATGTCGATAACG   GTCAAAAAACGCACAGT GATT ACT-TGTGTTTTTTGAC    TGACTTTACAACTCT  76 170
SH08_RS03400  692954 ..  692974 +  -5.4  -3.08197   CACGGTACACCGCTC            GACAAAGG CTGGC CCTTTGGC            TATGTGTATGTGAAC  53 205
SH08_RS03405  695704 ..  695734 + -11.8  -4.53705   CGCCTCCTGATGATG       AGCCGCTCCCGATG TGG TGTCGGGAGCGGTA       TTTTCTATAAAACTT 100 31
SH08_RS03445 NONE
SH08_RS03450  708885 ..  708895 +  -2.4  -4.18018   GTTTATCCGCCGACT                 CCAG CAG CAGG                 TTTTCCATCACGCGG  58 280
SH08_RS03475  714189 ..  714210 +  -5.8  -2.77899   TACGCCAGTGCCCCC           GCTGCGGT GACGCA ACCGCAGA            TGATTAGTGCCAGAC  51 135
SH08_RS03490  717807 ..  717833 +  -5.8  -6.32017   ATTAAAGTTGCCATG         CAGCGTCCGG GGAAGTG TTGGGCGCTG         TTTTTTTTGTTTCTT 100 53
SH08_RS03525 NONE
SH08_RS03530  725764 ..  725775 +  -2.2  -4.36914   GTGGATTATCTTCAC                CGTT CGTG AGCG                 TTTTCTCAAAAAAGA  60 185
SH08_RS03540  727179 ..  727191 +  -4.9  -3.14132   TTCGCATACCATCAA                TTCTT AAA AAGAA                TTGCTACCACGGAGG  51 397
SH08_RS03565 NONE
        rimI NONE
SH08_RS03575  730146 ..  730160 +  -9.2  -3.14132   TCGTTTTCAACAAGC               GCGGCG CGA TGCCGC               TTACTCAAGAAGAAA  72 81
        prfC  731781 ..  731806 + -14.7  -2.68338   ATTAATTCTTGCCTC         CAGGGCGCGGT AGCC GCTGCGCCCTG          TCAATTTCCCTTCCT 100 36
SH08_RS03585  732838 ..  732852 +  -4.2  -2.62396   TAAAAATATCGCATT               GAGTGA TTT TCACGC               TCATATCAAGCGGTG  45 95
SH08_RS03590  733088 ..  733106 + -14.6  -4.28049   AAAATTTTATCCAAA             GCCAGTCC AGC GGACTGGC             TTTTGCGGTTTTAGC 100 57
SH08_RS03595 NONE
SH08_RS03600  735146 ..  735185 + -11.5  -2.62003   CGGATAAGGCGTTCA  CGCCGCATCCGGCAGTTG GCGCA CAA-TGCCTGATGCGACG  CTTGTCGCGTCTTAT  80 144
SH08_RS03615  738049 ..  738059 +  -3.2   -3.3761   AGAATACTAACAAAC                 TCGC AAG GTGA                 ATTTTATTGGCGACA  47 89
SH08_RS03620 NONE
SH08_RS03625  740327 ..  740337 +    -4  -3.84451   CGAATAACGGTATAC                 TGAT CTG ATCA                 TTTAAATTTGAAGCA  57 34
SH08_RS03630  741602 ..  741621 + -10.7  -4.38927   GTTCTGATGGATTTG            GGCGGAG CGTTGA CTCCGCC             TTTGTTATGTCACAA 100 34
        deoD  742403 ..  742426 +   -16  -4.87037   CGATTGCCTTGTGAA          GCCGGAGCGG GAGA CTGCTCCGGC           TTTTTAGTATCTATT 100 59
SH08_RS03640  743847 ..  743868 + -12.3  -2.52464   CAAATCGAAGAGAAA           GTTGCCCGC ATGG GCGGGTAAC            TACCTTACAGCCCCC  86 5
        serB NONE
SH08_RS03660 NONE
SH08_RS03665 NONE
SH08_RS03670  749582 ..  749611 + -13.5  -3.08581   TTGCTGGTTTTGTAG       GCCGGATAAGGCG TTCG CGCCGCATCCGGC        ATTTTACGCATTACT 100 92
SH08_RS03680  753448 ..  753464 +  -4.5  -2.61144   ACTGATCCGCACGTT              TATGATA TGC TATCGTA              CTCTTTAGCGAGTAC  48 36
SH08_RS03685  754346 ..  754361 +  -8.2  -3.76224   TTGGCTACCCGATTT              CGTGCG CCAG CGCGCG               TTTCCTCACTGCCAA  72 518
SH08_RS03695  755481 ..  755493 +  -6.3   -3.1829   CTGGGCTAACGCGGT                GGTAT AGA ATACC                TCTTGCTCGTCGTCT  54 295
SH08_RS03705 NONE
SH08_RS03710 NONE
SH08_RS03715 NONE
SH08_RS03720  760314 ..  760331 + -12.7  -5.76949   GTTGAAAAATAAAAA             CGGCGCT AAAA AGCGCCG              TTTTTTTTGACGGTG 100 42
SH08_RS03730  761499 ..  761509 +  -2.6   -3.4252   ATTGTCGAGATTTAT                 TTTT TAT AAAA                 TTATCCTAAGTAAAC  48 215
SH08_RS03735  762526 ..  762547 +  -4.5  -2.91322   TGAGTAAATTAAAAT           TTTATTGAC TTAG GTCACTAAA            TACTTTAACCAATAT  50 156
        thrL  762699 ..  762720 +   -13  -6.06723   GAAACACAGAAAAAA           GCCCGCAC CTGACA GTGCGGGC            TTTTTTTTTCGACCA 100 41
        thrA NONE
SH08_RS03750 NONE
SH08_RS03755  767463 ..  767489 +    -8  -5.24129   CATTATCTCAATCAG        GCCGGGTTTGC TTTTAT GCAG-CCCGGC         TTTTTTATGAAGAAA  95 49
SH08_RS03760 NONE
SH08_RS03765  767983 ..  768016 + -11.7  -2.62043   CAATCCGGCATTCAG     CGCCTGATGCGACGC TGGC GCGTCTTATCAGGCC      TACGTTAATTCTGCA  80 59
SH08_RS03780  771617 ..  771646 + -12.9   -2.5294   CTGCTGTAATCATTC       TTAGCGTGACCGG GAAG TCGGTCACGCTAC        CTCTTCTGAAGCCTG  90 32
        mogA  772378 ..  772392 +  -4.2  -3.13164   ATCGGCAGAACGGTG               CGACCA AAC TGCTCG               TTCAGTACTTCACCC  47 91
        dnaK  776524 ..  776561 + -17.1  -3.25823   AACGGGTAATTATAC   TGACACGGGCGAAGGGGA ATT TCCTCTCCGCCCGTG-CA   TTCATCTAGGGGCAA 100 51
SH08_RS03810  777807 ..  777828 +  -4.4  -3.52073   GTGGCGGGGATCACT           CCCATAAG CGCTAA CTTAAGGG            TTGTGGTATTACGCC  52 115
SH08_RS03815  779387 ..  779419 +  -4.9  -4.64844   TTCAGCATATAGGAG     GCCTCGGGTTGATG GTAAAA TATC-ACTCGGGGC      TTTTCTCTATCTGCC  71 436
        nhaA  781090 ..  781109 + -10.7  -4.59414   CAGGACGGTTTACCG            GGGAGCC ATAAAC GGCTCCC             TTTTCATTGTTATCA 100 41
        nhaR  782046 ..  782072 +  -5.1  -2.62043   GTGCGTTAATCGGCA         GCTCCCCCA AAGTTAAGG TGGGGGAGA         TAGATTAGTTGTACA  49 32
SH08_RS03845 NONE
SH08_RS03850  784759 ..  784772 +  -3.7  -3.54475   TTTGGGCTAACAAAA               CCGGC TTAA GCCTG                TTATGTAATCAAACC  51 17
        ileS NONE
        lspA  788148 ..  788197 + -18.1  -3.53811   GATGCGATGCTGACG CATCTTATCCGGCCTACAGATTGC TGC GAAATC-GTAGGCCGGATAAGGCG TTTACGCCGCATCCG 100 53
SH08_RS03865 NONE
        ispH  789675 ..  789694 +  -9.3  -5.24129   TAAGTTATGCGAAAA            TGCCGGT CTTGTT ACCGGCA             TTTTTTATGGAGAAA 100 54
SH08_RS03875  790643 ..  790670 +  -6.4  -3.70149   CTGTCACATGTTATT        GGCATGCAGTC ATTCATC GACT-CATGCC        TTTCACTGATATCCC  63 42
SH08_RS03880  791605 ..  791624 +  -2.2  -4.35483   TGTACTTGATCTCAA            TAATTTGT AACC ACAAAATA             TTTGTTATGGTGCAA  58 16
SH08_RS03895 NONE
        carB  796511 ..  796530 +   -10  -6.07627   ATCGAATAACTAATA            CGGTTCTC TGAT GAGGACCG             TTTTTTTTTGCCCAT 100 79
SH08_RS03910  797223 ..  797245 +  -8.4  -4.33165   TAGGCGTCACATCCG           TCGTCCCC TGCAAAC GGGGGCGA           TTTTCCTCCATTTGC  82 134
SH08_RS03945 NONE
SH08_RS03950  806524 ..  806535 +  -5.8  -3.58037   GAAGATCCTTCCGGC                GCTG ACCG CAGC                 TTTAGCGCGTTGATC  61 1
SH08_RS03955 NONE
SH08_RS03960  808156 ..  808166 +  -2.4  -2.83798   CCTTTGGTGTGGAGT                 TCCG TTA CGGC                 TGATGTTGGTTTGAT  41 12
SH08_RS03965 NONE
SH08_RS03970 NONE
SH08_RS03975  812180 ..  812192 +  -3.3  -3.72363   ACATCATCCTCGCAC                CAGTC GAC GACGG                TTTACGCTTTACGTA  51 155
        folA  812746 ..  812778 + -15.6  -2.58999   GAATTTACGGCTAGC      GCCGGATGCGACGC CGGTC GCGTCTTATCCGGC      CTTCCTATATCAGGC 100 50
        djlA  820637 ..  820656 + -11.4  -3.90744   TGCCCACGATTAAAG            GTGGCCGC CCTG GCGGTCAC             TTCTTTGAGAAAAGG  95 64
SH08_RS04020  822038 ..  822053 + -10.4  -4.03234   GGCAGAAACAAAAAA              TCCCCG GACT CGGGGA               TTTATGTACAAGAGG  89 365
SH08_RS04055  833734 ..  833746 +  -4.8  -3.25088   AGTAGCATAGGGTTT                GCAG AATCC CTGC                TTCGTCCATTTGACA  53 75
SH08_RS04060  834564 ..  834578 +  -7.1  -3.30124   CGGGTTGCCTGATGC               GACGC TTGCC GCGTC               TTATCAGGCCTACAA  64 55
SH08_RS04085  839984 ..  840004 +  -9.7  -6.17268   GTGTAAAATCACCCG            CCAGCAGAT TAT ACCTGCTGG            TTTTTTTTATTCTCG 100 71
SH08_RS04090  841703 ..  841713 +  -4.6  -4.72272   ACGAAGTCCGGGTTT                 GGCT GTT GGCC                 TTTTTCATCCAGAAA  72 510
        leuO  847737 ..  847776 +   -16  -5.49234   CAAACGCTAACTGAT  TGCAGAATAGGTCAGACA TGAA TGTCTGGTTTATTCTGCA   TTTTTTATTGAATGT 100 31
SH08_RS04125 NONE
        ilvH  850257 ..  850286 +  -2.1  -3.53091   CGCGCGGCGATAAAA       TAATGCGTTGAGA ATGA TCTCAATGCGCAA        TTTACAGCCCAACAT  47 15
SH08_RS04135  850397 ..  850419 +  -2.8  -4.87318   GTTAATGAATTTAAC          CCATA-CCA GTACAA TGGCTATGG           TTTTTACATTTTACG  67 57
SH08_RS04140  851657 ..  851672 +  -6.8  -2.72043   TTATTTTGTTACATG              CGGCGA TGAA TTGCCG               ATTTAACAAACACTT  56 231
SH08_RS04145 NONE
SH08_RS04150 NONE
SH08_RS04155 NONE
SH08_RS04160 NONE
        murE NONE
        murF NONE
        mraY NONE
        murD NONE
SH08_RS04185 NONE
        murG  863134 ..  863155 +  -3.8  -2.64651   GCCCGGGCGTAATTG           TAGCGATGC CTTTT GCATCG-TA           TGAATTTAAGAAGTT  44 29
SH08_RS04195 NONE
         ddl NONE
SH08_RS04205 NONE
        ftsA NONE
SH08_RS04215  868925 ..  868946 +  -6.7  -3.09208   TGCTAAACTGGCCCG           CCGAA-TGTA TAG TACACTTCGG           TTGGATAGGTAATTT  59 75
        lpxC  869920 ..  869963 +  -4.5  -6.17292   CTGTCGTATAAAATT CGACTGGCAAATCTGGC ACTCTCTCCG GCCAGGTGAACCAGTCG TTTTTTTTTGAATTT 100 52
SH08_RS04225  870666 ..  870682 +  -5.7   -2.8704   TACTTCATTTTATTA              ACTCCGC AAC GCGGGGC              GTTTGAGATTTTATT  53 55
        secA  873425 ..  873442 + -12.7  -5.33866   ACTGTTGAAGTAAAA             GGCGCAG GATT CTGCGCC              TTTTTTATAGGTTTA 100 47
SH08_RS04235  873969 ..  873998 + -12.1  -2.72144   AATTTGTTTTTGTAG       GTCGGATAAGGCG TTCA CGCCGCATCCGAC        ATTTGCACAAGATGC  83 142
SH08_RS04260  876915 ..  876940 + -16.2  -3.32963   CCTGTAATCTCCCAA         CGCTGGCGTG GAGCAA CACGCCAGCG          TTATCCCATCCCACT 100 34
SH08_RS04280  880436 ..  880458 +  -5.4  -4.57073   TCGACTTCTACTGGC           GCATCCGGGT GCA GCCAGGACGC           TTTTTCGACCGCCTG  72 247
SH08_RS04290 NONE
SH08_RS04295  882611 ..  882621 +  -2.4  -3.46586   ATTAATGCGCTTTTA                 CGGC TTT GGCG                 GTTTTCTCTTTAAAC  47 82
        pdhR  885280 ..  885305 +  -4.9  -3.24924   GAAAGAATTAGTGAT         TTTTCTGG-TAA AAA TTATCCAGAAGA         TGTTGTAAATCAAGC  53 30
        aceE NONE
        aceF  890015 ..  890032 + -14.1  -5.32882   GATGTAAGTAAAAGA             GCCGGCC CAAC GGCCGGC              TTTTTTCTGGTAATC 100 34
SH08_RS04320  891791 ..  891807 +  -6.5  -5.50499   CCGGCAATTAAAAAA              GCGGC TAACCAC GCCGC              TTTTTTTACGTCTGC  91 61
SH08_RS04330  896667 ..  896692 +  -6.9  -6.02919   GCATAAACGACACAA         TGCCCGGTTAAT GAG ATTC-CCGGGCA         TTTTTTTATTTCTAA 100 61
SH08_RS04335  897255 ..  897292 +  -3.5  -3.19293   CTCGCGCATTTCTTT  CC-ACAGCGCAGCGGTA ATTTCC TGGCGCT-CGCTGTCGG   TTAAGTCTTCCGGTT  47 111
SH08_RS04355  901045 ..  901060 +  -3.2  -3.03771   TGATGTTAGGGTTTA              CGGTAT AAAA AGACCG               TATTCGGAAATATGC  44 18
SH08_RS04365  904390 ..  904423 +  -3.1   -5.4182   CTGGACGAGTAAGTG     TGAAGTTGCCGGATGT GTT GCATCCGGCA-TGGCA     TTTTTATTTGTGGTT  82 29
SH08_RS04375 NONE
SH08_RS04380  906898 ..  906927 +  -9.3  -4.10657   CGTAGCTAAGGCTAT       TTCCTCTCCTCTG GATT TGGGGGAGAGGAG        TTTTGACGGCTATCA  85 32
SH08_RS04385  907453 ..  907474 +  -5.2  -3.92542   CCGCGATTCTGATGG           CGCTTTTG CTACAA TAAAAGCG            TTGTTTCACCCTCGG  63 42
SH08_RS04390  909146 ..  909160 + -11.4  -3.56099   CCTGTCGTTAACGAA               GCAGGC GAT GCCTGC               TTTGAGGAAATTCTC  89 442
SH08_RS04400  910331 ..  910355 +  -7.8   -3.1855   GGGGTAAATTAATAA          CTGGCGCCAT CAGCC GTAGCGCCAG          TTAAGTATTACGCCA  63 67
SH08_RS04480 NONE
SH08_RS04485 NONE
        mrcB  929808 ..  929827 +  -9.2  -3.68662   GCTCAGATTGCGTAC            CGCTTGCG AACC CGCCAGCG             TTTCGAATATTATCT  78 150
SH08_RS04495  930440 ..  930452 +  -4.1  -3.44051   ACCCAGCGCACTATG                CGGAT GCC ATTCG                TTATAATGCTCGAAC  52 86
SH08_RS04510  933494 ..  933513 +   -15  -2.74322   CTAATTTCTCTTTTG            GGGCACGG ATTT CCGTGCCC             ATTTCACAAGTTGGC 100 37
SH08_RS04515 NONE
SH08_RS04520 NONE
SH08_RS04525  937268 ..  937281 +  -8.1  -3.30124   ACGGATGCCCGATGC               GACGC TGGC GCGTC                TTATCGGGCCTACAA  66 94
SH08_RS04535 NONE
SH08_RS04540  940719 ..  940747 + -14.7  -3.68024   ATCTAATCTGTTGTT        CATGTGCCGGATA AAC TATCCGGCACATC        TTCTCTCTTCAACGC 100 35
         dgt NONE
SH08_RS04565  946074 ..  946097 + -14.6  -3.52093   AGTAATCTCCCTCAA          CCCCTTCCTG AAAA CGGGAAGGGG           TTCTCCTTACAATCT 100 36
SH08_RS04570  947722 ..  947736 +  -7.1  -4.40003   AAACTTAACGCTCTT               GGCGA AAAAC TCGCC               TTTGTCTTTCTGGAA  75 372
SH08_RS04600  954529 ..  954549 + -11.1  -4.89729   GTACACGTTTGGTTA            GGGGGCC TGCATAT GGCCCCC            TTTTTCACTTTTATA 100 200
         tsf  955474 ..  955495 + -13.7  -4.84761   CTTAATTATCAAAAA           GGAGCCGCC TGAG GGCGGCTTC            TTTTTGTGCCCATCT 100 36
SH08_RS04610  956590 ..  956608 +  -3.1  -4.11751   ACTGTGTGTGACTGT             CTGGTCT GACTG AGACAAG             TTTTCAAGGATTCGT  58 280
         frr  957197 ..  957245 + -11.8  -5.27206   TGATTTCTTGAACGA CAAAAACGCCGCTCAGTAGATCC TTGC GGATCGGCTG-GCGGCGTTTTGC TTTTTATTCTGTCTC 100 38
SH08_RS04620  958577 ..  958594 +  -8.4  -6.02914   TATAAGGTCAGATAT             GCCGTG GTTTTA CACGGC              TTTTTTTTGTATAGG 100 130
SH08_RS04625 NONE
        cdsA NONE
SH08_RS04635  961641 ..  961656 +  -5.4  -3.33696   ACTTTTCAATGATTT              CTCTCG GTTA TGAGAG               TTAGTTAGGAAGAAC  55 13
SH08_RS04640 NONE
SH08_RS04645 NONE
        lpxD  965778 ..  965815 + -12.7  -4.07515   TTGTTCGCCAAACTT   TACGGCCTGTCTCATTC TTAC GATTGCGGCAGGCCGTG    TTATTATTGTCGTTT 100 52
SH08_RS04655  966294 ..  966315 +  -4.3  -2.79098   ACGATGATGTGTGCT           CGTAGCCGG GAGG CCTGATACG            TGATTGATAAATCCG  46 8
SH08_RS04660 NONE
        lpxB NONE
        rnhB  968830 ..  968841 +  -5.8  -3.01243   GTCAAACGCGCACTG                GGAC TTGC GTCC                 TGATTCTTGTGTCGA  54 11
        dnaE NONE
SH08_RS04680  973356 ..  973373 +  -9.1  -5.24129   AAAAGTTCTGAAAAA             GGGTCAC TTCG GTGGCCC              TTTTTTATCGCCACG 100 46
SH08_RS04685 NONE
SH08_RS04690  976041 ..  976061 + -13.3  -3.24925   TGTCATCGCCGCATT            TGCCCGGTA ACG TGCCGGGCA            TTGCTACTGTAAAAT 100 45
        tilS  977717 ..  977730 +  -8.1  -4.65895   ACCAGTAAGTTTGCC               GCAGC GTAT GCTGC                TTTTTCCCTGACAGC  84 358
SH08_RS04710 NONE
SH08_RS04715 NONE
SH08_RS04720  979866 ..  979879 +  -8.1   -3.4252   CTCAACGCCTGATGC               GACGC TGGC GCGTC                TTATCATGCCTACAA  68 157
SH08_RS04760  987299 ..  987313 +  -6.4  -3.12351   GGTTGAAGAGAAAAA               TCCTGA AAT TCAGGG               TTGACTCTGAAAGAG  57 161
SH08_RS04765  989088 ..  989101 +  -2.3  -2.72471   AAGAAGCGTACTTTG               CAGTG CTCA CACAG                ATTGTCTGATGAAAA  40 34
SH08_RS04770  989215 ..  989227 +  -6.3  -3.57309   CTCAGGCCTACCAAA                TTTGC ACG GCAAA                TTTGAAGAGGTTTTA  63 28
SH08_RS04775  989357 ..  989390 +  -6.7  -4.49756   GTTAAATAAAAAATA     CTTCAGAGTGTACCT GCAA AGGTTCACTGCGAAG      TTTTGCTCTTTAAAA  76 52
SH08_RS04780  992494 ..  992507 +  -2.4  -2.78679   AGAACGCAGAAGCGG               TCTG ATAAAA CAGA                ATTTGCCTGGCGGCC  41 85
SH08_RS04785  992647 ..  992662 +  -6.1  -2.82742   AAATTAAGCAGTAAG              CCGGT CATAAA ACCGG               TGGTTGTAAAAGAAT  55 44
SH08_RS04790  992772 ..  992791 +   -10  -5.92337   CCACTTATTAAGAAG            CCTCGAGT TAAC GCTCGAGG             TTTTTTTTCGTCTGT 100 38
        dkgB  993736 ..  993753 + -11.3  -4.68593   ATTAAGCCTCTCTGA             CAGCTCC TCCG GGAGCTG              TTTTTACATGCTCGC 100 36
SH08_RS04805 NONE
SH08_RS04810  996313 ..  996333 + -10.4  -5.25699   GGCATAAATAAAAAA            GGCACCGG GGGAA TCGGTGCC            TTTTTATTATCTGGT 100 34
SH08_RS04825  999317 ..  999329 +  -4.1  -3.14132   TTGGTAGCCTGTATC                TTCCA GTG TGGGA                TTCATCGCCGCGGCA  47 49
SH08_RS04835 1000580 .. 1000590 +  -2.4  -3.33744   AGGCGCTAAAAATAG                 CGAC TTG GGCG                 ATTTTTGCAGCAAAC  45 52
SH08_RS04840 1000793 .. 1000815 + -11.4  -5.88197   AATGAGTTCAGAGAG           CCGCAAGATT TTT AATTTTGCGG           TTTTTTTGTATTTGA 100 56
SH08_RS04845 1002169 .. 1002182 +  -5.3  -3.14229   GGAGCTATTAAAGGT               GCTAT TACG ATAGC                TATTAGTAAAAATAT  52 319
SH08_RS04860 1003568 .. 1003580 +  -4.7  -3.00918   CATTCCACAATCACT                CGCGC ATT GCCCG                CTTTATAATGTAGAT  48 460
SH08_RS04870 1004588 .. 1004605 + -12.7  -3.89354   TAGCGGATAAAGAAA             CGGAGCC TTTC GGCTCCG              TTATTCATTTACGCG 100 42
        gmhA 1007941 .. 1007954 +  -8.1   -3.4252   GCTGATGCCTGATGC               GACGC TGAC GCGTC                TTATCATGCCTACAA  68 90
SH08_RS04885 1008855 .. 1008870 +  -7.6  -3.21912   TGTAGTTTGATGCCA              GTTGTG GCTG CACAAC               TTCGTGGCTTAACGG  61 31
SH08_RS04905 1011227 .. 1011280 + -10.1  -2.56747   TGTAGGACGGATAAG GCGTTTACGCCGCATCCGGCAGTTG TACG CAGGTGCCTGATGCGACGCTGGCGC GTCTTATCATGCCTA  70 36
SH08_RS04910 1011911 .. 1011924 +  -8.1   -3.4252   GCAGATGCCTGATGC               GACGC TAGC GCGTC                TTATCATGCCTACAA  68 47
SH08_RS04920 1014560 .. 1014578 +  -5.2  -3.10343   TGGATAAGCAGCAGG             TGCTTTCG CAG CGAACGCG             TTAAATGCTGAATCT  53 3
SH08_RS04925 NONE
SH08_RS04930 NONE
SH08_RS04935 1016433 .. 1016443 +  -2.4  -2.87035   TGGGAAAATGGCAGA                 AGCG TTT CGCA                 TGCGTTTTTGAATTT  41 4
SH08_RS04940 1016939 .. 1016959 +  -3.1   -4.5442   TTGCAATGAAAATAA            CGCCCGCCT GGT ATGTGCGCG            TTTTCTGATTCCACA  63 48
SH08_RS04945 NONE
        prfH 1018133 .. 1018154 +  -2.2  -5.00616   TTGGCCCGATAGAAA           CCATGTCC ATTTCC GGATACGG            TTTTTTGAACAGACC  71 201
SH08_RS04960 1020197 .. 1020221 + -17.9  -4.47888   GGTCGCTAATCTTTT          CAACGCCTGGC ACT GCCGGGCGTTG          TTCTTTTTAACTTCA 100 32
        frsA NONE
SH08_RS04970 1021994 .. 1022016 + -13.5  -2.54276   GGCGTGAGTGAAATG           TGCCGGATG CATCA CATCCGGCA           ATATTCATTAAAACT  91 34
SH08_RS04980 NONE
SH08_RS04985 1025742 .. 1025796 +  -8.4  -3.69437   CGTGCGTAAATAAAA CCGGGTGATGCAAAAGTAGCCATTTG ATT CACAAGGCCATTGACGCATCGCCCGG TTAGTTTTAACCTTG  73 32
SH08_RS04990 1026074 .. 1026085 +  -2.2   -3.9941   CGCTCACTATACATC                CTTG GCTG CAGG                 TTTAGTTGTACACCA  53 174
SH08_RS05050 NONE
SH08_RS05055 NONE
SH08_RS05060 1035304 .. 1035324 +  -8.2  -2.62396   ACCTGAGCGGCAGTG            ACCTGCGG CATGC CCGCAGGG            TGATGTAACCCGCTG  63 95
SH08_RS05075 1036969 .. 1036979 +  -5.4  -4.22748   GAAATTCTTCTCGGC                 TGAC TCA GTCA                 TTTCATTTCTTCATG  65 24
SH08_RS05085 NONE
SH08_RS05090 1040693 .. 1040707 +  -4.2  -3.30124   CAGGCATTGCCGGAT               GGCG GCACAAG CGCC               TTATCCGGCCTACAA  51 92
SH08_RS05130 NONE
SH08_RS05135 1048161 .. 1048198 + -13.5  -4.45259   AATTATTTTAAGAGA   TAAAACCGTCTGCGGAA TATT TCCCGCAGACGGCTTTG    TTGTTTTTGAAATTT 100 39
SH08_RS05140 NONE
SH08_RS05145 1051743 .. 1051789 +  -9.3  -3.21993   GCGGTGGCGTGCACC GGCAGGC-GGCGGCCGATGCGT GAAT AGGCGATGGCGGCCAGCTTGCC TTCAATCTTCTCGAT  67 391
SH08_RS05165 1055190 .. 1055209 +  -5.8  -2.88579   TATTTAGTAGCGGAC            TTGCTGAT GACT ATCAGTAA             TCTATAGAAAATTGC  53 6
SH08_RS05200 NONE
SH08_RS05230 1066596 .. 1066626 + -12.8  -2.52795   TAATGCATTGAATGA       TAAAAATGGCGC AAATACA GCGCCATTTTTA       TAGGTTAAAAACATT  90 38
SH08_RS05270 NONE
SH08_RS05290 NONE
SH08_RS05295 NONE
SH08_RS05300 1079466 .. 1079476 +  -2.4  -2.62851   GGGTAGGATCATAAA                 GTCC TCG GGTC                 GTTGTCCACTCTTTT  38 60
SH08_RS05325 1084338 .. 1084351 +  -5.3   -3.1811   GTATAAGGGATGTAG               CCATT TTTA AATGG                ATTTCTTATGCCAAA  53 304
SH08_RS05330 NONE
SH08_RS05335 NONE
SH08_RS05340 1087545 .. 1087571 + -13.2  -3.59979   CTGCTCTTCTGTAAA         TATCCTGGTATT ACC AATGCCAGGATA         TTTACAGTGAAAAAG  93 139
SH08_RS05370 1094491 .. 1094516 +  -9.7  -3.99062   TGTTATTGCATAAAA         CCGCGCCATGT CTGC ATATGGCGCTG          TTTCTCCTACCTCTT  86 42
SH08_RS05380 1096525 .. 1096541 +  -3.7  -5.15634   ATCCCCGTTAATATG              CCATTTG GCG CAAATTG              TTTTTTAATCCACTG  79 113
SH08_RS05395 NONE
SH08_RS05400 NONE
SH08_RS05405 NONE
SH08_RS05410 1102744 .. 1102755 +  -7.2  -3.30124   GTTCATGCCGGATGC                GGCG TGAA CGCC                 TTATCCGGCCTACGA  64 48
SH08_RS05415 NONE
SH08_RS05420 NONE
SH08_RS05425 1105699 .. 1105718 +  -3.4  -3.29074   TATCACACTTACAGG            CGCTCGCC TTAT GGGGAACG             TTGCTGCTCTGTTTC  47 239
SH08_RS05430 1107094 .. 1107111 +  -2.7  -4.38927   GCGATTTCTGATAGT             GC-CTGGT TTA ATCAGAGC             TTTATTATCTGCGAC  59 208
SH08_RS05435 1108054 .. 1108065 +  -5.8   -3.2657   ATCTGTATATCTGTA                TGCC AACT GGCA                 TTCCATCTCTTTTTT  57 110
SH08_RS05440 1109033 .. 1109043 +  -2.4  -2.64099   ACCATAAGAGATAAG                 CGCC GCC GACG                 ATTCTGATAAGCGAA  38 431
SH08_RS05450 1109820 .. 1109839 +  -2.8  -4.07568   GGATAAAGCGTTCGC            GCTGCATT CGGC AGTTCAGC             TTTTCAGCCGCCGCC  54 108
        prpB 1112592 .. 1112605 +  -8.1  -3.30124   GCCGATGCCTGATGC               GTCGC TGAC GCGAC                TTATCAGGCCTACGA  66 67
SH08_RS05465 NONE
        prpD NONE
        prpE 1117583 .. 1117638 + -11.1   -4.4767   TAGGTTATTGTCGGA TGCGTCGCGCGGTGCATCCGGCACTG TGTGC CGATGCCTGATGCGACGC-TGACGCG TTTTATCATGCCTAC 100 38
        codB NONE
SH08_RS05485 1120471 .. 1120482 +  -7.2  -3.30243   GTTTATGCCGGATGC                GGCG TGAA CGCC                 TTATCCGGCCTACGT  64 64
SH08_RS05495 NONE
SH08_RS05500 NONE
        cynX 1124190 .. 1124214 + -12.9  -2.75822   TCGCTGAACTTGTAG          GCCTGATAAGC GCA GCGTATCAGGC          AATTTTTATAATTTA  91 91
        mhpA NONE
        mhpB NONE
SH08_RS05545 NONE
SH08_RS05550 NONE
SH08_RS05555 NONE
SH08_RS05560 1135531 .. 1135584 + -14.7  -2.57931   TAGGTCTGATAAGAC GCGTTAGCGTCGCATCAGGCA-TC TGCGCAC GACTGCCGGATGCGGCGTGAACGC CTTATCCGGCCTACG 100 141
SH08_RS05565 1137270 .. 1137292 +  -4.1  -3.53091   GCGTTTACAGGTATA           CTCGCTAAA AATTA TTCAGCGGG           TTTGGAAACAAAGAT  52 91
SH08_RS05570 1137943 .. 1137981 +  -9.5  -2.76583   CGGATAAGGCGTTCA  CGCCGCATCCGGCA-GTC GTGC GCCATGCCTGATGCGACG   CTTTGCGCGTCTTAT  70 123
SH08_RS05600 NONE
SH08_RS05605 NONE
        tauA NONE
        tauB NONE
SH08_RS05630 NONE
        tauD 1149229 .. 1149266 +  -6.3  -3.85698   AGAGGGTTAGGGTGA   GGGGGCGTTCACC-GT ACTTTCA ACAGGTTAACTCCCCC   TTTCTGAGAGGAAAC  65 75
SH08_RS05650 1152553 .. 1152582 +  -3.6  -3.01712   AGTACTGGCCTCCAC      GGTCCGTGTGAACG ATAA CGTTC-CG-GGGCC       TCTTACGCCGCCACA  46 268
SH08_RS05665 1154995 .. 1155018 + -15.4  -3.14132   ATTTAATCTAAATAA          TGCCCGTCAA GGAT TTGACGGGCA           TTACTGCAAAGGACG 100 69
SH08_RS05670 1155670 .. 1155697 + -11.4  -3.07816   AGTATTAATCAGGAC        GCGGGGAT-AACC AAC GGTTTATTCCCGC        TTAGCTCGGTCACCA  84 33
SH08_RS05680 NONE
SH08_RS05685 NONE
SH08_RS05690 1159829 .. 1159842 +  -2.3  -4.08767   GCATTGCGATATTTT               CCGCT AAAC AGCGA                TTTTGACAGGGTGAA  56 355
SH08_RS05700 1160504 .. 1160526 +  -6.3  -3.49886   GTGAAGCCAGGCAGG           GTGTTGATC TCGTT GATCACCAC           TTCGTTCTCTGGGGT  58 191
SH08_RS05710 1161715 .. 1161733 +  -5.4  -3.27298   GAATATATTTCATAA             CTTTTATT TAT AATAAAGG             TTGATAATTAAAAGC  55 3
SH08_RS05715 1162222 .. 1162236 +  -4.2  -5.21459   AAAGTTGTCACGGCC               GAGACT TAT AGTCGC               TTTGTTTTTATTTTT  78 68
SH08_RS05720 1163700 .. 1163731 + -14.4  -5.63374   GGCTGAAATAAAACC      GCGCCCGGCAGTGA ATTT TCGCTGCCGGGTGG       TTTTTTTGCTGTTAG 100 30
SH08_RS05725 1164148 .. 1164181 +  -7.4  -2.87963   GATACCTGATAGTGC     TAACGGGTGAGCTA CGAAAA TGGCTCACCCGAAA      TATCATACTTCTGCC  59 39
        adrA 1165552 .. 1165571 +    -2  -3.87815   ATTTTTGCGGAACCC            ATTACCGC CTGA GCGGCAAA             TTTATACGCCTGGGC  54 226
SH08_RS05740 1166821 .. 1166837 +  -5.9  -5.64421   GGGGTGTATTGAGAT              TTTCACT TTA AGTGGAA              TTTTTTCTTTACAAT  95 91
        aroL 1167452 .. 1167462 +    -4  -4.08394   CCCTGGCACAGACGA                 TCAA TTG TTGA                 TTTTCGAGCGCCTAT  61 15
SH08_RS05750 NONE
SH08_RS05755 NONE
SH08_RS05760 1168627 .. 1168638 +    -3  -4.18018   CGGCTGGCTGCGGAA                TTAC TGGT GTAA                 TTTTGCGTGACAGCC  58 14
SH08_RS05765 1169000 .. 1169024 +  -6.3   -4.8667   CTATCTGTAATTCCT          CGCCTTCCCCT TGA ACGGGAGGGCA          TTTTTCTGAAATATC  80 31
SH08_RS05770 1169544 .. 1169563 +  -2.8  -3.53164   CTGCGCTAAAAATTA            TTGCTCGC CGTA GCGAATAA             TTATATGCCTGGTGT  48 86
SH08_RS05780 1172054 .. 1172064 +  -8.2   -4.4648   CACCTAATAACTCTC                 CGCC TTT GGCG                 TTTTGTAGTAACAAT  85 494
SH08_RS05800 1178366 .. 1178393 +  -7.6  -3.68962   CAACCCGCTTTTAAC        GCCTTGCTCATC GGAC GCAGAGCAGGGC         TTATGATTTCTTAAC  70 27
        phoR 1179744 .. 1179765 +  -9.5  -4.88918   CATCTTTTATTGCCA           TAAGCCAGT CGAT GCTGGCTTA            TTTTCTTTGCAGTCA 100 52
SH08_RS05810 1181465 .. 1181488 + -15.3  -5.64304   GAACATTTGTTTTAA          CCACGGGGC TGCGAT GCCCCGTGG           TTTTTTATTGTGTTG 100 47
        proY 1182909 .. 1182937 + -14.6  -3.03338   CCTTGCGTTCTGTAA        GCCGGTTCAGGA GGAAA TCCTGATCCGGC        TATTCCGAAAGTTAT 100 42
SH08_RS05820 1184997 .. 1185011 +  -5.6  -3.58533   TCCAGACGTGGGCGG               CGGCTT GCC ATGCCG               TTTAACACGTTCTGG  58 157
        queA 1186601 .. 1186625 +  -9.9   -2.9162   AGGCAATTAATGAGC          GCGTCGGGGAG TAA TTCCGCGGCGC          TGGTTTAAAACGTTG  73 12
         tgt NONE
        yajC 1188133 .. 1188147 +  -2.7  -2.93361   CCGTCCTGCCGAAAG               GCACC ATGAA GGCGC               TGTAATTAAAATTTT  43 6
        secD NONE
SH08_RS05850 1191034 .. 1191053 +   -10  -5.92337   CGTTGATGTTGAAAA            TCCCGGTC AGAA GATCGGGA             TTTTTTTTGATGTAT 100 50
SH08_RS05855 NONE
SH08_RS05860 1191632 .. 1191652 + -12.6  -4.30576   GTTAACAATCAGAAA            TGCCGGGA ATAAA TCCCGGCA            TTTTCATAATCAGAA 100 36
SH08_RS05875 NONE
        ribD NONE
        ribH NONE
        nusB 1196096 .. 1196136 +  -7.7  -5.43553   AAAAAGTGATATCCA GGCCGGTAGATTCACGGAA GACCG TTCCATG-ATC-GCCGGCC TTTTCTTTTTTACCT 100 32
SH08_RS05895 NONE
SH08_RS05900 1197648 .. 1197690 +  -6.2  -2.73829   TGTCGTAGTTGTGCA CCGATGCCTGATGTGACG CTTGTCA CGTCTCATCAGGCCTGGA CTCTTATTTAAATCC  55 33
SH08_RS05925 1203544 .. 1203567 + -15.4  -3.55444   AATTTGTGGTTTTTA          CGTCGCATCT GGTC AGATGCGACG           TTTGCCGCATCCGAC 100 39
SH08_RS05940 1205815 .. 1205855 +  -9.7  -3.58726   ATAAGCGTAGCGCAG  CAGGCAATTCGCCGCGTTT TTT ATGCCTGACGAATTGCCTG  TTCTATCTCAAAGCG  80 133
SH08_RS05985 1215317 .. 1215328 +  -5.8  -2.75343   GGAGCAGGAAGCATC                GCGT AAAA ACGC                 ATTTGCAACTGTCGG  53 20
SH08_RS05990 1215507 .. 1215528 +  -3.6  -2.66232   TCGACTCATAAAAGT           GATGCCGC TATAAT GCCGCGTC            CTATTTGAATGCTTT  44 13
SH08_RS05995 1216999 .. 1217022 + -12.4   -5.9873   TAAATTCGCACAAAG          GCCCGTCACC GCCA GGTGGTGGGC           TTTTTTTTGTCATGA 100 60
SH08_RS06000 1217839 .. 1217856 +  -4.7  -2.96274   TCGTAATTGATGCCA             GAGGCGC AACT GTGCCGC              TATACTTATCCAGGG  50 31
        clpX 1219267 .. 1219285 +   -11   -4.3623   TTAGTTAACCAAAAA             GGGGGGAT TTT ATCTCCCC             TTTAATTTTTCCTCT 100 59
SH08_RS06010 1221808 .. 1221837 + -13.6  -5.72616   CACTAATAAAAACAG       GGCTGGCAGGCT AATTCG GGCTTGCCAGCC        TTTTTTTGTCTCGCT 100 58
SH08_RS06015 1222292 .. 1222311 +   -10   -5.7827   GTGACGAAGTTCAAG            GGCGCATC TACT GATGTGCC             TTTTTTATTTGTATT 100 61
SH08_RS06020 1224368 .. 1224383 +  -8.2  -4.39571   GCTGTAACAAGAAAA              GGTCGC TTTC GCGGCC               TTTTCCATTTCTGAA  82 74
SH08_RS06025 1224878 .. 1224900 + -10.7  -2.96274   TTTTGCCAGACTGAA           GAGGTCATA CCAGT TATGACCTC           TGTACTTATAACAAC  79 62
SH08_RS06030 1225709 .. 1225735 +  -7.3  -4.21194   GGAGAAATCCGTTTC        GCAGACGCCAGT AATT AC-GGCTTCTGC         TTTTACCTGATACGC  72 401
SH08_RS06045 1228781 .. 1228796 + -11.8  -5.86332   AGATCCCTTCCAGCA              CCGGGC AATT GCCCGG               TTTTTTTTGCGTTGA 100 43
SH08_RS06050 NONE
SH08_RS06055 NONE
SH08_RS06060 1232987 .. 1233010 +  -8.9  -4.67038   GGTGCAAAAATGTAA          CGCACTGTG CACTGT CATAGTGCG           TTTTCATTTTCAAAC 100 62
SH08_RS06065 NONE
SH08_RS06070 1234802 .. 1234828 +  -7.3  -5.68023   AAGCACTGCAAAAAA        CAGCCGGACGGT TTTC ACC-TCCGGCTA         TTTTTTTAATTGTGA 100 42
SH08_RS06080 1236491 .. 1236518 +   -15  -2.71364   CAATATTAAGCGACG        TTAACCCTCTCC GCCC GGAGAGGGTTAG         TAGTTCCAGCGATAA 100 32
SH08_RS06090 1238018 .. 1238036 +  -5.2  -5.02074   TAGTGATTGATCATG             TCACGCAG CAA TTGCGGGA             TTTTTTCCGAGGTGA  80 485
SH08_RS06130 1246955 .. 1246972 +  -9.9  -2.51951   AACCCTGAATCTGAC             TCCAGGA TTTT TCCTGGA              CATTTTCGTCGTTGC  70 39
SH08_RS06135 1250872 .. 1250886 +  -9.2  -3.18681   CAGCGCATGGCGGCA               GCGTGC CAG GCGCGC               TTCATAGGCTTCCAC  67 466
SH08_RS06155 1251827 .. 1251842 +  -6.1  -3.04398   CAATTATTGCGTACA              GCCAG TACATT CTGGC               GTTTTCGAGCACAGG  56 60
SH08_RS06160 1252548 .. 1252572 +  -9.9  -3.09492   CACAAGATGTGCATT          CAGCCTCGCCG TTC TGACGGGGCTG          TGTTAGCATTACCCC  74 77
SH08_RS06165 1254558 .. 1254574 + -10.9  -3.25015   TCCGCCCCATTTGAT              CGTAAGC ACA GCTTACG              TTCGTCATCCTTAAC  81 27
SH08_RS06170 1254918 .. 1254931 +  -2.3  -2.64099   ATGCAGCTGCCGCCT               GGCTT TAAG ATGCC                GTTCTGATGCAAACC  40 5
        recR 1255552 .. 1255569 + -11.3  -2.55818   TTTTTAAGCAAACGA             GAGCAGG ATCA CCTGCTC              TCGCTTGAAATTATT  79 34
SH08_RS06180 1257533 .. 1257560 + -15.7  -5.50723   GGTTTCCTGATGTAA        TGCCGGATGAC CTTCGT GTCATCCGGCA         TTTTTCTTTTCATCA 100 31
         adk 1258448 .. 1258467 +   -10  -4.07885   TTATCAGCAATCTCA            GGCCGGAT ATTC ATTCGGCC             TTTTACAAAAACCTC  88 121
SH08_RS06190 1259575 .. 1259599 +  -5.7   -4.3129   GTAAAGAACTGAGCG         CCGTCG-CGA AGAGCC TCGTCGGCGG          TTTTCATCATCCGTG  70 50
SH08_RS06200 1261981 .. 1262010 + -12.1  -2.82803   ATCGTCGGTTCGTAG       GCCAGATAAGGCG TTCA CGCCGCATCTGGC        ATTTGGCTCTCGATG  83 44
        ushA 1267274 .. 1267285 +  -2.2  -5.24129   GGGGGCGTCGATAAT                CGTT GGCA GACG                 TTTTTTCTGCCCCAG  79 200
SH08_RS06230 1269273 .. 1269286 +  -8.1  -3.30124   ACCATTGCCTGATGC               GACGC TTAC GCGTC                TTATCAGGCCTACAA  66 206
SH08_RS06240 NONE
SH08_RS06245 1274411 .. 1274421 +  -3.2   -3.4298   GTATAACATCTCTCT                 GTGC GCA GTAC                 TTCCTGTATTATTGT  49 35
SH08_RS06250 1275104 .. 1275123 +  -2.1  -3.67792   CAAAACGTCGGCCAA            TCAGCTGC TGCCC GC-GCTGG            TTTAAATGACTATCG  49 196
SH08_RS06265 NONE
SH08_RS06270 1277898 .. 1277931 + -16.8  -2.81547   GAAGAAGAAATGATG     CGATGCCGGATGCG CAGCAT CGCATCCGGCGTTG      TGGTTCATGTGCCGA 100 28
SH08_RS06290 NONE
SH08_RS06295 1283379 .. 1283402 +  -6.7  -4.02653   TGAGAGTAAATAAGG          GGCGTTCTG GTTGAA TGGAACGCC           TTGTTTAAATTAATT  69 41
SH08_RS06300 NONE
SH08_RS06305 NONE
SH08_RS06310 NONE
SH08_RS06315 1289600 .. 1289614 +  -3.6  -4.38154   TTTTGTTGGTGAAAT               TAATGT TAC GCATTA               TTTTATAACAAATAT  63 192
SH08_RS06335 1293446 .. 1293456 +  -3.2  -4.18197   GAAAGTATTCCTGAA                 CAGG AAC TCTG                 TTTTGCGTGACGCCT  58 5
SH08_RS06340 1294372 .. 1294389 + -12.7  -5.40474   TAATGTCTGTCGCAT             CCCGCTC TGCG GAGCGGG              TTTTTTTGACAAAAT 100 38
SH08_RS06345 NONE
SH08_RS06350 NONE
SH08_RS06355 1298081 .. 1298094 +  -2.5  -5.67711   AAGATGTTGCTTCAG               TATTA AAAA TAATA                TTTTTATTTTATTTG  84 109
SH08_RS06360 NONE
SH08_RS06365 1301056 .. 1301076 + -10.4  -3.36671   ATCTGGCCCCTGCAA            TGCCCGTC CTTGC GGCGGGCA            TTCTCCGGTTAAGGT  78 40
SH08_RS06370 NONE
SH08_RS06375 1303610 .. 1303641 + -11.6  -2.93723   TATCGCATAAGAGTG      CAGTACTCATGCCG GATG CGGCATGAGTACCA       TATCCTTCCTGAAAA  83 69
SH08_RS06395 1308856 .. 1308869 +  -3.1  -3.60098   AATAAAAAACTGGCT               CGTTT ATTA GAACG                TTTGCAATAAGGGGT  51 2
SH08_RS06400 NONE
SH08_RS06405 NONE
SH08_RS06410 1311895 .. 1311909 +  -7.1  -3.30124   ATTTGTGCCTGATGC               GACGC TTGAC GCGTC               TTATCAGGCCTACAA  64 56
        cysS 1316540 .. 1316563 + -16.8  -3.46602   GTAATTGCGCTATTG          CCGGATGCGA GTTT TCGCATCCGG           TTATCGTCTGCGCCA 100 37
SH08_RS06455 1319287 .. 1319306 +  -5.1  -2.75498   ATGAGATATGAATAA            TCAAAAC CACGTT GTTTTGA             ATTATATATCACGTC  50 26
SH08_RS06460 NONE
SH08_RS06465 1322851 .. 1322864 +  -3.9  -3.63515   AAATTATCAATAAGA               TAATC TGCA GATTA                TTATTGGCGATGGCA  53 44
        fimH NONE
SH08_RS06475 1324790 .. 1324804 +  -2.1  -4.08216   CTTTCACTGTGCTCT               GGATT TGTTT GATCC               TTTTCAGGAAGGTAA  56 438
SH08_RS06485 1325758 .. 1325779 +  -7.2  -4.13341   ACAGGCGGTATCGTT           CAGCGCCA CACCAA TGGCGCGG            TTTGATTTGCTCTCT  70 452
SH08_RS06500 NONE
SH08_RS06505 NONE
SH08_RS06510 NONE
SH08_RS06515 NONE
SH08_RS06520 1328815 .. 1328840 +  -4.7   -2.8547   CAAACTGTAGTACAA         TTCTCTCCAGT TTGA ACAGGAAAGAA          TATGCTATGAACCCT  49 61
SH08_RS06525 1329210 .. 1329235 + -10.5  -3.41907   AACGACTAAAATATG         GAGGCTCTTAT ATTT ATATGAGCCTC          GTTTTATGCTTTTTG  80 56
SH08_RS06530 NONE
SH08_RS06535 1331056 .. 1331069 +  -2.3  -4.39426   TAATTACTTTGTTTG               CTCCC ACAA GCGAG                TTTTGTACGGCTGTA  58 121
SH08_RS06540 NONE
SH08_RS06545 1332848 .. 1332876 + -11.8  -3.32844   ACACGGCATAATTAT        GTCACCGGAG CCTGAACAA CTCCGGTGAC        TTCTGCGCTAAACGG  89 90
SH08_RS06550 NONE
SH08_RS06555 1333601 .. 1333622 +  -2.9  -2.71712   AATGGTTGCGACTGG           CAGCAAGGA GGAG TCATGGCTG            ATTTGAGAAAAGCAG  41 3
SH08_RS06560 NONE
SH08_RS06565 NONE
SH08_RS06570 NONE
SH08_RS06575 1335010 .. 1335045 + -14.2  -4.77036   CTTGAGGGAGCCACT    TATATGTTG-GGGAGGC AAC GCCTCCCGCAACATATC    TTTTTCGTAATCAGA 100 164
SH08_RS06580 1335432 .. 1335445 +  -3.7  -3.93664   GGGTGCTCCACCCTG               GCCCG GATG CTGGC                TTTCATGTATTCGAT  58 226
SH08_RS06595 1337595 .. 1337607 +  -4.1  -4.31164   GAGGTTGCCCCGTAT                TCAGT GTC GCTGA                TTTGTATTGTCTGAA  63 400
SH08_RS06605 1337886 .. 1337944 + -16.3  -4.06182   AAAATACCCCCTGAA AAGAAAGGAAACGACAGGTGCTGAAAG CGAGC TTTTTGGCCTCTGTCGTTTCCTTTCTC TGTTTTTGTCCGTGG 100 83
SH08_RS06620 NONE
SH08_RS06625 1340023 .. 1340055 + -11.4  -3.16564   ATCATTGGGATTATG     CCGCAGCACG-TCTT AAGC AAGAACATGCTGCGG      TTGGATGCTATTTTT  84 40
SH08_RS06635 1341119 .. 1341135 +  -5.2  -2.99268   TTGTTTGATGTTATG              CTTTTG CGCCC CAAAAG              GTTGTTTAGATGTAT  52 98
SH08_RS06640 1342545 .. 1342575 + -11.8  -4.43309   TTGAAATGGCTAGTT       ATTCCCCGGGGCGA TTT TCACCTCGGGGAAA       TTTTAGTTGGCGTTC 100 229
SH08_RS06685 1354938 .. 1354971 +  -3.7  -3.10905   CGTCTGCGTTCGCTC     ACCCCAGTCACTTAC TTAT GTAAGCTCCTGGGGA      TTCACTCGCTTGTCG  48 79
SH08_RS06690 NONE
SH08_RS06695 NONE
SH08_RS06700 NONE
SH08_RS06705 1361291 .. 1361317 + -16.7  -5.65513   GTCAACCATCCGAAA         CCGCTCTCATC CATTC GATGAGAGCGG         TTTTTTTAATTACTG 100 70
SH08_RS06735 1365680 .. 1365721 +  -8.2  -3.65046   ATTTCTATCAACCCT GGGGCTGCCACTCCAAA CCCGAACAA TTTGGA-TGGTAGTCCC TTCTTCGCATGGAGG  73 250
SH08_RS06740 1365919 .. 1365940 +  -4.4  -3.52073   TGTGCGGGGAGTAAT           CCCATAAG CGCTAA CTTAAGGG            TTGTGGTATTACGCC  52 45
SH08_RS06745 1367112 .. 1367138 +    -8  -3.14683   GGAGAATAACAAAAA         TGGTCATCTGGA GCT TACAGGTGGCCA         TTCGTGGGACAGTAT  63 49
SH08_RS06760 NONE
SH08_RS06765 NONE
        entF 1375968 .. 1375994 +  -8.2  -5.85425   AATATTATTTATAAA         CCCATAATTA CAGAAAA TAATTATGGG         TTTTTTATTTGTTTG 100 44
SH08_RS06775 1377291 .. 1377301 +    -4  -3.66356   TGATGGCAGACCACT                 TAGT TTA ACTA                 TTTGCGGTTGAAGGT  54 18
SH08_RS06795 1381778 .. 1381807 +  -8.7  -2.87132   CCAGCATCTGCCCTT       GTGCTGAT-TCTGG CGT CCAGAGATTGGCAC       TGTGTGCAGCGGCAG  61 343
SH08_RS06805 NONE
        entE NONE
SH08_RS06815 NONE
SH08_RS06820 NONE
SH08_RS06825 NONE
SH08_RS06830 1390028 .. 1390060 +  -9.8  -3.34715   TTGATAGCATTTGTA     G-GCCGGATAAGGCG TTCA CGCCGCATCCGGCAC      TCTTTCAGCAACATG  76 144
SH08_RS06835 1390564 .. 1390582 +  -6.6  -3.53012   TAGGCGACTTTGGTG             CCGTGGAG AAA CTTCTCGG             TTTGCGGCAGCACGG  61 300
SH08_RS06845 1392684 .. 1392718 +  -7.2  -3.90112   CCAGGCGCGGGAATA     TTGACGGTCGGCAA ACAACTC TTGCAGGCCGTTAA     TTTGCTTCAGGCGCA  68 53
SH08_RS06870 1397556 .. 1397575 + -13.6  -4.63218   AATTCACCTAATTCT            TCGGGTGC TGCG GCACCCGA             TTTTCTTCCCCGCAC 100 163
SH08_RS06875 1399259 .. 1399282 + -13.1  -5.27923   ACCTGCAATTGCTTA          GCCGCCGGG GTCAAA CCTGGCGGC           TTTTTTATGGCATTA 100 56
SH08_RS06885 1401441 .. 1401452 +  -5.8  -3.31263   CATCCTCTGGGCAAA                GCGA GTTA TCGC                 TTGTGCAGATGGGAT  57 230
        dpiB NONE
        dpiA 1412462 .. 1412484 + -13.4   -2.6955   GGGTGACATGATAAA           GCCGGAGGAA ACT TGCCTCCGGC           ATTACTATTTACTTG  93 35
        pagP 1415160 .. 1415176 +  -7.3  -4.02302   GGTGTACTGGTAACC              GACACAG CAT TTGTGTC              TATTTTTCATGTAAA  72 158
SH08_RS06960 1415435 .. 1415451 +  -9.4   -5.9663   AGCAAGAATTCAAAA              CCCGCT TAATC AGCGGG              TTTTTTTTGGTCTTT 100 49
SH08_RS06970 1416706 .. 1416719 +  -6.7  -3.91801   TAAACAACCGTCGCT               TTGCG CCGC CGCAA                TTATTATGATGTTTT  69 3
        tatE 1417107 .. 1417124 + -11.3  -5.24129   GTTCGATACAAAAAA             CCCGCTT CAAA AAGCGGG              TTTTTTATCAGACAG 100 72
SH08_RS06990 1419810 .. 1419831 +  -5.1    -3.494   CAACATAGACACCTG           GCGCGTC AGCCCGAG GATGCGC            TTCTATACCCAGTTC  56 340
SH08_RS07060 1433563 .. 1433581 +   -11  -3.30039   GATACAGGTCGAGAG             CCTGTCGG AGA TCGACAGG             TCTTCCTTCTCCGTA  76 178
SH08_RS07070 NONE
SH08_RS07075 1436964 .. 1436980 +  -4.4  -3.61178   GCTTTACGGGTGTCG              GGTTTG ACCCC CAGACC              TTTGAGGTAGATCCA  55 237
SH08_RS07085 NONE
SH08_RS07090 1439588 .. 1439631 + -18.8  -3.91144   ACGATGTGTTTTTTG CGCCGATGCCGGATGCAGCG TTTA CGCCGCATCCGGCAGCCGTG TTTATGGGATCTCAA 100 40
        ubiF 1454314 .. 1454329 + -10.4  -5.22312   GCAGAAAAGCAAAAA              GCTCGC CGAA GCGAGC               TTTTTTAATGTGGCT 100 153
SH08_RS07220 1463851 .. 1463873 +   -12  -6.15828   ATCCAACAATGACAA           GCGGTGGAGA TCT TCTCTGCCGC           TTTTTTTTTCATCAA 100 76
SH08_RS07225 1465868 .. 1465884 + -10.8   -5.4588   GCAAACAATCCAAAA              CGCCGC GTTCA GCGGCG              TTTTTTCTGCTTTTC 100 226
        chiP 1467655 .. 1467684 +  -7.8  -3.59627   CCATCTTCTGATGCC       CGACGCGGCAGGT TTTGT GCCTGCCGCA-CG       TTTGAGGAATTTGCT  70 30
SH08_RS07235 1468073 .. 1468090 + -11.3   -4.5442   CCCTTGCATAAAAAA             GCCAACC CGCA GGTTGGC              TTTTCTCGTTCAGGC 100 72
SH08_RS07250 1469078 .. 1469094 +  -6.5  -2.78495   TGGTGCCCAATGCGT              CGCAGAA ATA TTCGGCG              TAATCTTCCTGGTCA  51 248
SH08_RS07270 NONE
SH08_RS07275 1473127 .. 1473146 + -11.4   -5.1287   CATTTAATAAAAAAA            GGGCGGTC GCAA GATCGCCC             TTTTTTACGTATGAC 100 44
SH08_RS07280 1473865 .. 1473879 +  -2.8  -3.80862   ACATGTCTTATTGCG               TGAATG TTT CTTTCA               TTTGATACTGCATTT  52 74
SH08_RS07310 1479685 .. 1479704 +  -6.4  -3.95584   TGTTTAAGATAAAAA            GCCGTATT TATT ATTACGGC             TTTAATTAATAAAAG  67 183
SH08_RS07345 1488054 .. 1488075 + -17.3  -5.36441   TGAATACATTGAAAA           CCGCCAGCG GAAA CGCTGGCGG            TTTTTTGTATCAGGA 100 52
SH08_RS07350 1492447 .. 1492458 +  -4.4  -2.80622   TTATTAGATTTGTAT                TCAC CGGA GTGA                 TGTAATGAAATATAT  46 9
SH08_RS07355 NONE
SH08_RS07360 NONE
SH08_RS07365 1495075 .. 1495089 +  -2.1  -3.37796   TACTTATTGTCTAAA               GCTGT TTTTC ATAGC               TTATACATGATCAAA  45 194
SH08_RS07370 1495455 .. 1495469 +  -2.1  -3.37796   TCCTTATTACCTAAA               GCTGT TTTTC ATAGC               TTATACATGATCAAA  45 94
SH08_RS07375 NONE
SH08_RS07380 1497608 .. 1497623 +  -4.7  -3.17392   GCTTTCGTAAATTTG              TCCTG CTACAA CAGGA               TTAACTTCACAAATA  51 93
SH08_RS07385 NONE
SH08_RS07390 1499771 .. 1499786 +    -6  -4.02132   GGCCTATTAAGACTC              CAGCGC CAGC GCGCGG               TTTCTGAATTTCAGC  66 184
SH08_RS07400 NONE
SH08_RS07405 NONE
SH08_RS07410 NONE
SH08_RS07415 NONE
SH08_RS07420 NONE
SH08_RS07455 1513465 .. 1513475 +  -5.4  -4.32436   CTTCATAACTTTTAC                 GCAT TAT ATGC                 TTTTCCTGGTAATGT  68 162
        sdhC 1514232 .. 1514245 +  -3.1  -2.78384   CGTGCTTTCACTTCT               CGCAGG AGT CCT-CG               TATGGTAAGCAACGC  43 4
        sdhD NONE
        sdhA NONE
        sdhB 1517112 .. 1517158 + -10.7  -2.57931   TAGGCCTGATAAGAC GCGCAAGCGTCGCATCAGGCA ACCAG TGCCGGATGCGGCGTGAACGC CTTATCCGGCCTACA  76 45
SH08_RS07480 NONE
SH08_RS07485 NONE
SH08_RS07490 1521499 .. 1521512 +  -8.1  -3.30124   ATTGAAGCCTGATGC               GACGC TGAC GCGTC                TTATCAGGCCTACGG  66 98
        sucC NONE
SH08_RS07500 1523812 .. 1523829 + -11.3  -5.39755   GGTTTCGACATGGTT             GGCCATC GTAT GATGGCC              TTTTTTGTGCTTATC 100 101
SH08_RS07510 NONE
SH08_RS07515 NONE
SH08_RS07520 1529537 .. 1529553 +  -5.3  -2.55213   TAACCCTGGGTGAGT              TAATTAT AAT ATAATTA              TAAGTTAACTAAATG  49 12
SH08_RS07525 NONE
SH08_RS07530 NONE
SH08_RS07535 NONE
SH08_RS07540 1533310 .. 1533335 +  -7.6  -4.63184   AATTCTCTTTAAAAA         ATTATGGGCC GCTCCA GGCCCATAAA          TTTTTACGCTCCCTT  86 46
SH08_RS07545 NONE
SH08_RS07550 NONE
SH08_RS07555 NONE
        tolA 1536332 .. 1536345 +  -2.3  -2.70544   GGTCAACATCAGGCA               CCGGT TGCC ACGGG                GTTCTGGTAGTTTTG  40 63
        tolB NONE
SH08_RS07570 1538281 .. 1538292 +  -2.2  -2.52896   GGTTTACTAAGAGAA                TTGC ATGA GCAG                 TAACTTCAGACATCA  39 31
SH08_RS07575 1539088 .. 1539115 + -10.7  -2.79302   GTAATGCATAACACA        CGACCAGAAGT CGCATT ATTTCTGGTCG         TGTCGTGCGAATCAT  77 37
SH08_RS07580 1539417 .. 1539429 +  -6.3  -3.46602   CTGCACGACCCACCA                CTAAC ATA GTTAG                TTGTAGTATCCAGCG  61 126
SH08_RS07585 1539522 .. 1539535 +  -2.3  -3.10409   CGATCCCGTCATCAC               CCACC ACCG GGTCG                TTAGCTCAGTTGGTA  43 20
SH08_RS07590 1539697 .. 1539717 +  -5.4  -3.06302   AGTCATCCTGCACGA            CCCACC ACTAATGAC GGTGGG            TTCGGTGGAAGTAGT  52 117
SH08_RS07595 NONE
SH08_RS07600 1540042 .. 1540066 +  -3.6  -2.56596   AGTAAAAATCTTTCA         GGTAAC-ACCC GTAT GGGTCGTTAGC          TCAGTTGGTAGAGCA  44 158
SH08_RS07605 1540126 .. 1540143 +  -4.1  -3.21099   CGAATCCTGCACGAC             CCACC AATTTAAA GGTGG              TTACTGGTAGAGAAC  49 20
SH08_RS07610 1540342 .. 1540372 + -14.9  -2.90212   GCACGACCCACCAAT       GTAAAAAAGCGCC CTAAA GGCGCTTTTTTGC       TATCTGCGATACTCA 100 28
SH08_RS07615 1541827 .. 1541840 +  -6.7  -3.53224   ATAACGAATAATAAG               GCGTA ACGT TACGC                TTTGGGGGAAAGATG  63 37
SH08_RS07620 1542664 .. 1542689 +  -2.5  -3.13299   GAATGGTGGCGTGCT         CAATCTGATAG TGAT CCATCAGGTAG          TGTTGGATCTGATCC  43 117
SH08_RS07640 1545485 .. 1545505 +  -8.3    -4.208   GTTAGCAACAAAAAA            GCCGACT CACTTGC AGTCGGC            TTTCTCATTTTAAAC  79 138
SH08_RS07680 1553619 .. 1553636 +  -8.4  -5.35224   CATTGATTCCCTGAA             TGCCCG CTTAGT CGGGCA              TTTTCTTTTTCTCAA 100 35
        modA NONE
        modB NONE
        modC 1556656 .. 1556676 +  -4.6  -3.53012   GGGCGAACTTCCATA            CGGCGTTA ACTTG TTGCGCCG            TTTCAGCCAGAGAAG  53 382
SH08_RS07705 1558281 .. 1558304 + -15.3  -3.10053   TAACCGCTGATTTAC          CCGGCGCAG TCTCTC CTGCGCCGG           TGTATTAACCTATCT 100 38
SH08_RS07715 NONE
SH08_RS07720 1562151 .. 1562174 + -13.2  -2.89055   TCCATTTATTATCTT          TCTGCGCACT TCAC GGTGCGCAGA           TATCTGGAGCATTTG  91 169
SH08_RS07725 1564473 .. 1564501 + -11.8  -2.73468   CCATGTGAATGTAGG        TCGCATTCGGCA CTTAT TGTCGGATGCGA        TGCTTGCGCATCTTA  83 47
SH08_RS07745 NONE
SH08_RS07750 NONE
SH08_RS07755 NONE
        bioD 1572026 .. 1572041 +  -3.2  -4.52589   TTGCTTTGGGGATAA              C-CCGGT AAG GCCGGAG              TTTTATCTCGCCACA  63 417
SH08_RS07765 1574325 .. 1574382 + -15.5  -3.12482   GCAATATATTGAATT TGCGCGGTTTGTAGGCCGGATAAGGCG TTCA CGCCGCATCCGGCATAAACAACGCGCA CTTTGTCTTCAATAG 100 116
        moaA NONE
SH08_RS07785 NONE
        moaC NONE
        moaD NONE
        moaE 1578443 .. 1578473 +  -3.8  -3.55761   CTGGTAGTTTTTTGT       TAGCCGGATAAGGC ACC GCTGCGTCCGGCAA       TTTCACCGCTCAGTA  51 34
SH08_RS07805 1579295 .. 1579313 +  -8.1  -5.84381   TTTTCACCATCACTA             TCCCGGC CATGT GTCGGGA             TTTTTTTCTTACTAA 100 45
SH08_RS07810 1580588 .. 1580598 +  -2.4  -4.25074   CGAATTTCCATGAAG                 GCAG CAC CAGC                 TTTTGCCCTTTGATG  58 420
SH08_RS07830 1584119 .. 1584129 +  -8.2  -3.57263   GTGGCGACAATTAAC                 GCCG GTA CGGC                 TTTGCCGATGAAGAT  69 417
SH08_RS07860 1591044 .. 1591073 + -13.5  -2.71712   TGCATGCTTTTGTAG       GCCGGATAAGGCG TTTA CGCCGCATCCGGC        ATTTCACAACAAGCA  93 146
        dinG 1593890 .. 1593903 +  -9.5  -3.25223   AAAACGAAATCCCCA               CGCCG TCGG CGGCG                TTAATGATGTGAGTC  74 8
SH08_RS07875 1594909 .. 1594932 + -12.5  -4.07568   TTAATTCTTTTCTCA          GCCGGATGA GCCATG TCATCCGGC           TTTTACCCCACCGCA 100 37
SH08_RS07880 1596288 .. 1596334 + -15.1  -2.62463   TAGGCCTGATAAGAC GCGGTAGCGTCGCATCAGGCA TCTGT TGCCGGATGCGGCGTAAACGC CTTATCCGTCCTACG 100 190
SH08_RS07910 1602189 .. 1602200 +  -4.4  -4.32201   CCAATAATCAGCCCG                CGAA TTTC TTCG                 TTTTCCATTAATTCC  67 269
        ompX 1609667 .. 1609696 + -10.1  -4.70879   TCACTTTGGTGATAT       AAAAAATCCGCCT CTCG GGGCGGATTTTTG        TTTTTAAGGTTTCGG 100 41
SH08_RS07965 NONE
SH08_RS07970 1613470 .. 1613488 +   -11  -4.59424   CTGGCAAATAAAAAA             GGCGGATT ATG AGTCCGCC             TTTTGCTTTAAGTTT 100 44
SH08_RS07980 1616585 .. 1616595 +  -8.2  -4.62069   CGCGGGAAGTCGCCC                 GGCG ATG CGCC                 TTTTTCCAGTGCGGC  88 369
SH08_RS08005 1623023 .. 1623043 + -11.1  -3.30124   TCATAAATTGCTGAT            GACGTGGCG GAG TGCCGCGTC            TTATCAGGCCTGGAG  81 58
SH08_RS08020 NONE
SH08_RS08025 NONE
SH08_RS08030 NONE
SH08_RS08035 NONE
SH08_RS08040 1631535 .. 1631547 +  -3.4  -2.58398   CCTCACAGGAAATTA                TTGC CCTAA GCAA                GTGTTGTAACTTTCT  42 73
SH08_RS08045 NONE
SH08_RS08050 1635360 .. 1635385 + -13.3  -2.60244   TAATCATTATTCGCA         GGCCGGACAAA TGAT TTTGCCCGGCC          TGAATTAATTAAACC  93 38
        bssR 1637323 .. 1637343 + -12.6  -3.48703   AGGCCTGAAAACTAA            GGGGGAGA AAGCG TCTCCCCC            TTCATGTTTAAGTTT 100 33
SH08_RS08065 1638896 .. 1638917 +  -2.9   -3.3581   GCTTCCGCACGACGT           GCCGGTG AGTCGATC CACAGGC            GTTTTTGCCCGTACT  47 380
SH08_RS08075 1640625 .. 1640649 + -13.6  -3.39862   TTAATCTTCTGATAA          CCGGATGGCG CGAAA CGTCATCCGG          TTATACGTCATTAAT 100 37
SH08_RS08090 1643595 .. 1643621 +  -8.7  -3.37464   CGAAGGGTAAAAAAA         TGCCTGACTGC TTTGT GCGATCAGGCA         TTCTCGAATTAATGG  71 31
SH08_RS08110 1646761 .. 1646779 +  -7.4  -3.29043   ATTAAGACTGATGCC             CTGCGGAA AAG TTCTGCGG             TTGTGCAAAAAAATT  64 143
SH08_RS08120 1649152 .. 1649168 +  -9.4  -3.29511   GAAAAAATCAGTAAA              GCCCTC AACGC GAGGGC              TTGTCAGACGATCAG  74 27
SH08_RS08130 NONE
SH08_RS08135 NONE
SH08_RS08140 1651535 .. 1651546 +  -3.6  -2.78216   TACGACAGAATATTG                CCTG AAAA CGGG                 TGGTTAGTCGCAATC  45 7
SH08_RS08145 1652125 .. 1652168 + -11.8  -3.65046   TCCACTGATAACTCC TTTCG-AGCACGCAGTCGCTG GTG CAGTGGCTGCGCGCTGCAAAA TTATCTGCTGTTTTT  93 33
SH08_RS08150 NONE
SH08_RS08155 1653638 .. 1653654 +    -3  -3.05384   CAATTCGCACCATTA             TG-GTGC GCTT GCACACA              TTCAATGCCGGAGAG  44 83
        potG NONE
SH08_RS08165 NONE
SH08_RS08170 1656643 .. 1656667 + -12.2  -4.25104   GCCAACCTGGCTACA          TAATGCCGCG CATGT CGCGGCATTG          TTTTCATGGAAGACG 100 55
SH08_RS08175 NONE
        rumB 1658504 .. 1658517 +  -9.5  -3.98172   TGTCATCAGTCTCAA               GCCGC GGTT GCGGC                TTTCTGAATCTTACT  83 200
SH08_RS08215 NONE
SH08_RS08220 1664560 .. 1664588 +    -8  -4.30978   TCAAAATTCAACTTG        GAGACGCCGTAG TGGGT CAGCGGCGGCTC        TTTTGCTGACTTGCG  78 158
SH08_RS08270 1676837 .. 1676886 +  -6.6  -5.14965   AACATCGTGGCCATT TGTGGCTGAATAGCGTCGAGCATCT CAT AGC-GC-CGACGGTATTCAGCC-CG TTTTTTACTGGCGAT  90 47
SH08_RS08280 NONE
SH08_RS08285 1680993 .. 1681013 + -12.6  -4.35926   TTTTTGAGATAAAAA            TGCCAGCC GATCG GGCTGGCA            TTTTGCCTTTAGGAT 100 41
        clpS NONE
        clpA 1684250 .. 1684277 +   -15  -5.38054   AGGTAGGTTGGTCAA        GTCCGTAATCTC GAAA GAGGTTACGGAC         TTTTTGTTTATGGGG 100 51
SH08_RS08335 1691830 .. 1691859 + -13.7  -2.75577   TGTTAATCCATACAG       CAACAGTACTGGG GTAA CCTGGTACTGTTG        TCCGTTTTAGCATCG  93 82
SH08_RS08340 1695910 .. 1695945 +  -9.6  -2.89564   TAACTAATGCATCGT    ATGCCGGATAAGGCGC GGTA GCGTCGCATCCGGCAC     TCTATCAACTGAAAA  70 38
        lolA 1696675 .. 1696696 +  -2.3  -3.37634   GTAAGTAGAGGCACC           TGAGTGAGCA ATC TG-TCGCTCG           ATTTTTCGGATAATA  45 33
SH08_RS08350 1698024 .. 1698038 +    -5  -3.48053   ACGCTACCGTTAATG               TTATCG TTG CGGTAA               TGTTGTTACTGTATC  55 28
SH08_RS08355 1699430 .. 1699443 +  -9.5  -5.72616   TTCTGAATCTAAAAA               GCGCC TGCG GGCGC                TTTTTTTGTCTCCCT 100 51
SH08_RS08360 NONE
SH08_RS08365 NONE
SH08_RS08370 1703590 .. 1703607 + -10.5  -4.14927   AGCTAATCATAACAA             CCGGGGT TTCG GCCCCGG              TTCTCTTTTATTTCT  91 35
SH08_RS08380 1705714 .. 1705745 + -13.2  -5.82036   TGTAAATGAATTCAA      GCAGAGTGTGAA CTTACTGT TTCACACTCTGC       TTTTTTGTTTCTTCT 100 36
SH08_RS08385 1707502 .. 1707526 +    -8  -3.14344   CACATTCTAAACGAC         CAGTATCAAGG TACT CCTTGAT-CTG          TTCATAGAGCAGATA  61 184
SH08_RS08395 1708988 .. 1709011 + -12.5  -3.53761   GCGCGGAATAAAAAA          GCGGCAACT CAATAA AGTTGCCGC           TTTACGGGGAAATTA 100 71
SH08_RS08420 1716280 .. 1716307 +  -4.8  -3.14132   AGGAATAATGTATTA        CCTGTGGTCG CAATCGAT TGACCGCGGG         TTAATAGCAACGCAA  51 167
SH08_RS08425 1717445 .. 1717465 + -12.6   -5.4659   GAAATTTTGCTTAAT            CCCCACAG CCAGC CTGTGGGG            TTTTTATTTCTGTTG 100 45
SH08_RS08430 1718823 .. 1718841 +  -8.8  -5.75945   CTTTCTTTATCAAAA             CGTCGGCA CAT TGTCGGCG             TTTTTTTTCGGACCT 100 69
SH08_RS08435 1719828 .. 1719848 +  -8.9  -3.66784   AACGATTTGTGGCGT            CGGCGCGTA TAA TGCGCGCGG            TTATGTTAACGGTAC  75 141
         cmk 1720589 .. 1720613 +  -4.9  -3.06696   CGAATTTGCAGTACC          CCCGTTGCAAT GGA ATGACAGCGGG          TATGTTAAACAACCC  50 46
        rpsA 1722438 .. 1722455 + -14.1  -3.18264   GTAATCAAGCACTAA             GGGCGGC TACG GCCGCCC              TTAATCAATGCAGCA 100 111
        ihfB 1722820 .. 1722848 + -13.3   -3.0636   CTCAAACTTGAACGA        GAGAAAAGCACCT GTC GGGTGCTTTTTTC        ATTTCTCTAATCTGG 100 49
SH08_RS08455 NONE
SH08_RS08460 NONE
        lpxK 1728040 .. 1728052 +  -4.7  -3.20901   TCTGGCAACTAGTTA                CGCCG CGG CAGCG                TTCGATTGATGGAGT  51 29
SH08_RS08470 NONE
SH08_RS08475 NONE
SH08_RS08480 1730322 .. 1730335 +  -5.3  -4.35675   ATTTTGGGAGGAGTG               TCGTA CCGT TACGA                TTTTCCTCAATTTTT  68 65
SH08_RS08485 1731319 .. 1731335 +  -3.6  -4.09685   AATCACTCTTGCCGT              GGCTCG CCTGA CGAACC              TTTTAGCCACTGCCA  60 15
SH08_RS08495 NONE
SH08_RS08500 NONE
SH08_RS08505 NONE
        mukB 1739477 .. 1739494 + -12.7  -5.26119   GCGAGTTAAAATTAA             GGCGGCA GCAA TGCCGCC              TTTTCTTTTTCCGAA 100 32
SH08_RS08515 1741644 .. 1741660 +  -5.7  -3.13432   GCGATTCTCTGCAGC              CCCCGTC ACT GCTGGGG              TTGAGTCATCTTGAC  55 91
SH08_RS08520 NONE
SH08_RS08525 1743168 .. 1743185 + -12.7  -3.75772   TTGTCATCAGTCTCA             GCCCGCT TTTC AGCGGGC              TTCATTGTTTTTAAT 100 212
SH08_RS08535 1744639 .. 1744653 +  -2.1  -3.25719   ACGCCCAGTTTGTTG               TCAGA ATCGA TCTGG               TTGATGATGTAGTCA  43 102
        pepN 1751923 .. 1751958 + -13.3  -2.77431   CACTGGCTTGATAAA    TAACCGAATGGCGGC AATAGC GCCGCCATTCGGGGA     ATTTACCCCTGTTTT  93 30
SH08_RS08585 1757123 .. 1757144 + -15.9  -2.62118   TTTTATTAATTAGTA           CCCCTCCAG TGTT CTGGAGGGG            ATATTCATATTTTTT 100 57
SH08_RS08590 NONE
SH08_RS08595 NONE
SH08_RS08600 NONE
SH08_RS08605 NONE
SH08_RS08610 NONE
SH08_RS08615 1763350 .. 1763364 +  -2.8  -5.75342   GCCCTGAAACAGGTT               CGGAAA ACG TTTGCG               TTTTTTTTGCCGCAG  86 34
SH08_RS08620 1764484 .. 1764527 + -10.6  -3.22448   CTTCGAATTCCTCTT TATAAGATAATCAGGGCT TTATTTTC AGCCCTGGTTGTTTTATA TTCATCGCTGTTGCT  77 47
SH08_RS08625 1765357 .. 1765373 +  -4.4  -3.90922   GATTTTCTAATTGCT              CCAGCA ACACC TGTTGG              TTATTTCCACGAAAT  60 204
        rlmL NONE
SH08_RS08640 1770635 .. 1770649 +  -2.8  -2.69799   TATCAGGCATGAAAA               CCAACA CTT TGTTAG               TCATCTGTAAAATAG  41 105
SH08_RS08645 NONE
SH08_RS08650 NONE
SH08_RS08655 1774166 .. 1774192 + -10.8  -5.76633   GATTTGTAAATATAA         CCGTCTCCGGTA TGT TGCCTGAGGCGG         TTTTTTTGTCTCTAA 100 48
SH08_RS08660 1774583 .. 1774609 + -15.2  -2.51207   TCTGTCTCTTTAAAA         AGAAACCTCCGC ATT GCGGAGGTTTCG         CCTTTTGATACTCTG 100 42
SH08_RS08675 1777661 .. 1777676 + -11.8  -4.82901   TAAAGGCAAAAAAAA              CCCCGC AGCA GCGGGG               TTTTTCTACCAGACG 100 65
SH08_RS08685 1779394 .. 1779423 +  -3.5  -3.14881   CCGACTCAGTTTTTG       TTGCGGTGTTAAC CAGA GTTGCCAGCGCGA        TTGCTGACCGAGTTG  47 309
SH08_RS08695 1780430 .. 1780443 +  -3.1  -3.11634   TACGCCGAAACAGGA               GTTTC CTGC GGAAC                TTGAGTAATCTGGCG  46 4
        helD 1785331 .. 1785359 +    -6  -3.09327   CTGGATTATGAAGTC       TGCCG-TTGCCAC GTTG GTGGCGACCGGAA        TGTTCCATACCGTCG  53 147
SH08_RS08730 1787048 .. 1787075 + -17.1   -4.1673   TGGCCAAATAAAAAA        TCCCCGGAAGG CAAAAA CCTTCCGGGGA         TTTGTTCAGGGATTA 100 30
SH08_RS08745 1789087 .. 1789118 +    -8  -5.06414   TTAGCCGGACCTTTC      GGAAACAGTCGGTA TAAA TAGCGGCTGTTACC       TTTTTCTTCGCCAAA  91 86
SH08_RS08765 NONE
SH08_RS08770 NONE
SH08_RS08775 NONE
SH08_RS08780 NONE
SH08_RS08785 NONE
SH08_RS08790 1796343 .. 1796356 +  -3.1  -3.57144   GCAATCGGCGAATAC               CTCTG GTCG TAGAG                TTTCAGGATAAAGAG  49 78
SH08_RS08795 NONE
SH08_RS08800 NONE
SH08_RS08805 NONE
SH08_RS08810 1800669 .. 1800705 +  -2.8  -3.95448   AGAACTGTCTAATGC   GTAGACCGGAAAAGGCG TTCA CGCCGCATCCGGCC-AC    TTTCAGTTTTACTCT  54 95
SH08_RS08855 1809674 .. 1809689 +    -4  -3.53091   AACATTTGCCGCTGT              TGGTCCT CGC AGG-CCA              TTTACGCGGCAAAAT  51 485
SH08_RS08865 1810529 .. 1810542 +  -3.1   -2.7263   GCAAATACGCACTGA               CCATGC GCC GC-TGG               ATTTCACAAAATAAT  42 197
SH08_RS08870 NONE
SH08_RS08875 1810929 .. 1810961 +  -7.8  -3.79909   AAATAATGTGATTTT     GT-GAACATCACCCC GTGC GAGGTGATGTTCCGC      TTGTTGCTAATTTAG  72 30
SH08_RS08890 1816319 .. 1816331 +  -4.7   -2.8478   CGTACTACCAGTTCG                CGCAG TTC CAGCG                GTTTGGTGACGTAAT  47 371
SH08_RS08900 NONE
SH08_RS08905 NONE
        torD 1821255 .. 1821285 +   -14  -2.73364   ATGAGCTACAAACCG       GGAAAGCCGCTGGC GCA GCAGGCGGTTTTCC       TGCTTCAGGTGCGCA  95 198
SH08_RS08925 1824120 .. 1824148 + -10.3  -4.61633   GAGGCAGGGGCTAAT        CAGGCATAGTTTG CGT CAAACCTTGCCTG        TTTTTGAAGATGTAT 100 169
SH08_RS08930 1825514 .. 1825544 +  -6.7   -2.7563   GCGGTGAAATAACAG       AAAACTCCCCCGC GAGAA GCGGGGGAGTCGC       TGGTTAAACGTTTTT  57 29
SH08_RS08945 NONE
SH08_RS08950 1827168 .. 1827186 + -13.1  -4.84918   TGTCAACAATCTGCA             CCGCCGG TAACC CCGGCGG             TTTTCTGTTTATGGC 100 255
SH08_RS08990 1833566 .. 1833599 + -10.9  -2.63585   TTCGACCACGTTAAA     GATGCCGGAGGAGGT TGTA ACATCCTCCGGCTAC      CTGTTTAACCTATAG  76 27
SH08_RS09000 1837941 .. 1837967 +  -4.5  -2.62111   TTCCGGTGGCAGATA        TAACGGCAA-GT TTCG ACATTGCCGATA         ATAATTTTTTGGAGA  48 136
SH08_RS09005 1839595 .. 1839620 + -14.7  -2.62515   TGCAGGGAGCGCGCA         GGGGGCGGC CAATCGCC GCCGCCCCC          TGCTGTCCCGGCCTT 100 123
SH08_RS09015 1840880 .. 1840891 +  -4.4  -3.34344   CGTAACAAATACGAC                GCAA ACTC TTGC                 TTAGTTACAACATAC  51 36
SH08_RS09020 NONE
SH08_RS09025 1843375 .. 1843388 +  -8.1   -3.4252   GCAGATGCCTGATGC               GACGC TTGC GCGTC                TTATCATGCCTACAA  68 69
SH08_RS09035 1844755 .. 1844779 + -13.6  -4.33907   AGTGTGTTATCGGTG          CAGAGCCCGG GCGAA CCGGGCTTTG          TTTTGGGTGTTTATG 100 40
SH08_RS09060 1852964 .. 1852974 +  -3.2  -4.24123   GGACACAGGCCTAAG                 CGAG GTT CTTG                 TTTTCAAATTGTTCC  58 71
SH08_RS09075 NONE
SH08_RS09080 1855673 .. 1855692 +  -7.8  -3.58256   ATATACGAAAAAAAA            GCCCGTAC TTTC GTACGAGC             TCTTCTTTAAATATG  70 185
SH08_RS09085 1856035 .. 1856054 +  -7.8  -3.58256   ATATACGAAAAAAAA            GCCCGTAC TTTC GTACGAGC             TCTTCTTTAAATATG  70 177
        ghrA 1857702 .. 1857723 +  -7.3  -3.05384   AATAAAGCATCAGGA           TTCCTGCTA TCCT TGGCGGGAA            TTGAATACAGGAGAG  61 39
SH08_RS09100 NONE
SH08_RS09105 1859084 .. 1859100 +  -3.7  -3.07622   CGTCACTCATAACTG              CAACGGA TAA TTTGTTG              TTGCATAAAATGTGT  48 51
SH08_RS09110 1859685 .. 1859703 +  -7.4   -5.4251   CTTAAACAGTAAAAT             GCCGGA TGATAAT TCCGGC             TTTTTTATCTGTCAG  95 59
        csgB NONE
        csgA 1863789 .. 1863804 + -10.4  -5.40072   TTTGTATTACAGAAA              CAGGGC GCAA GCCCTG               TTTTTTTCGGGAGAA 100 48
        csgC NONE
SH08_RS09155 1864678 .. 1864692 +  -5.7  -2.56181   AGAAGGTGTAAGGAG               GCGTT ATGAA AACGC               GTATTCATGTTGTGC  52 115
SH08_RS09160 NONE
SH08_RS09165 1866620 .. 1866630 +  -3.2  -3.83568   TGGCGTCGATATTGC                 CCGT GGA ATGG                 TTATTGTAAATGTGG  53 6
        mdoG NONE
SH08_RS09190 1872400 .. 1872418 +   -11  -5.40072   ACGAGCCAATAAAAA             TACCGGCG TTA TGCCGGTA             TTTTTTTACGAAAGA 100 156
SH08_RS09195 1873158 .. 1873184 +    -8  -3.06183   GGTATTCGACGACGA         CGTAGACTGTTC CAT GAATAGACTGCG         TTGAATAACACTACG  59 514
SH08_RS09220 1876728 .. 1876754 + -10.9  -2.77005   AACAGAATAAATATC         ATTGCCGGATG CGTGC CATCCGGCAAC         ATTTCACGCTTACTT  77 31
SH08_RS09275 NONE
SH08_RS09280 NONE
SH08_RS09285 1886655 .. 1886671 + -13.7  -4.11692   ATTCGCCTCTTTCAG              CGCCTGC CTT GCAGGCG              TTTTGCCCGTGGGTC 100 88
SH08_RS09290 1888244 .. 1888270 + -14.4  -2.75074   ACGGTGTAACAATGC         ATTCCGGCCTGC AGT GCAGGCCGGAGA         TAATCTTCAGATCGA 100 32
        flgB NONE
        flgC NONE
        flgD 1891430 .. 1891441 +  -2.2  -3.22113   CTTCACATTTCAGGA                GTCA GTCA TGGC                 CTTTTCTCAAGCGGT  43 43
        flgE NONE
        flgF 1893447 .. 1893461 +  -4.2  -2.94633   CATGACAAGTATAAG               TTGCCC GAT GCGCAA               GTTTATCGGGTCTAT  47 52
        flgG 1894382 .. 1894400 +  -8.1  -3.96337   AACTCTAAGGCTTAA             CCGGTGG CAGGT TCACCGG             TTTACTGATTTTTGA  74 33
        flgH NONE
        flgI NONE
        flgJ NONE
        flgK NONE
        flgL 1899891 .. 1899919 +  -8.8  -5.54264   TGGGTATGTTTTGTC        TGCCTGCTCTGG GATCG CTGGGGCGGGCA        TTTTTTTGCCTATTT 100 67
SH08_RS09370 NONE
SH08_RS09375 1904795 .. 1904806 +  -5.8  -2.72144   GATAATGGGCGGTTG                GCCT GATA AGGC                 GTTTACGCCGCATCA  52 58
SH08_RS09385 NONE
        rpmF 1906390 .. 1906435 +  -4.2  -4.07568   ACCGCGGCCGCAAGG TCATCGCTAAG--TAATCACGC ATCT GCGTGATGAAGCTTAGTGAGGA TTTTCCCCAGGCAAC  59 12
SH08_RS09395 1907562 .. 1907579 +  -5.5  -3.57263   TGCGGTAGCAGGACG             CTGCCAG CGAA CTCGCAG              TTTGCAAGTGACGGT  57 33
SH08_RS09400 1908551 .. 1908561 +  -2.4  -2.92267   CGGTGGATTCACCTG                 GGGC TCC GCGC                 TGGTTCGTTTCTAGG  42 1
SH08_RS09405 NONE
        fabG 1910295 .. 1910309 +  -7.8  -2.62642   AAAATGCTCATGTTG               CGCGCA GTC TGCGTG               GTTATGAGTAATAAT  60 54
SH08_RS09415 1910722 .. 1910748 + -13.1  -5.02287   GGCGTAAGTGAACAT        CTCCAGGCGGTC GTTC GACCGCCTG-AG         TTTTATCTTTTTGTC 100 34
SH08_RS09420 1912068 .. 1912083 +  -8.2  -5.52096   TCCACCCTTATAAAA              GGTCCG CTTG CGGGCC               TTTTTTCTTAGCTTT 100 51
SH08_RS09425 NONE
SH08_RS09430 NONE
SH08_RS09435 NONE
SH08_RS09440 NONE
SH08_RS09445 1916438 .. 1916456 +  -4.6  -2.79098   AATCCATCCGTTGAA             TGAGTTTT TTT AAAGCTCG             TAATTAATGGCTAAA  49 27
SH08_RS09450 1918189 .. 1918206 + -12.7  -5.04987   CGTTGGGGAGACTAA             GGCAGCC AGAT GGCTGCC              TTTTTTACAGGTGTT 100 50
SH08_RS09460 NONE
SH08_RS09465 NONE
SH08_RS09470 NONE
        thiK NONE
SH08_RS09480 NONE
SH08_RS09485 1924797 .. 1924810 +  -3.9  -4.34402   TTTCAGCAACAAAAC               TTGAT TAAC ATCAA                TTTTGGTATGACCAA  63 275
SH08_RS09490 1926306 .. 1926322 +  -2.2  -3.48924   GCCCTTGAGGAACAG              CGCG ATCGGCAGC CGCG              TTGTATCAGGCATCC  47 80
SH08_RS09495 1927023 .. 1927049 + -10.1  -5.43866   GTACTCTGCAATTTG         GCCCCTCATTC GCTCA GGCTGAGGGGC         TTTTTTTGCGACTTA 100 48
SH08_RS09505 1928230 .. 1928256 + -18.8  -5.60993   CTACTGCTGATTTTT         TCCCCGCGACAT GCC GTGTCGCGGGGA         TTTTTTTATCCGGGC 100 64
SH08_RS09525 NONE
        lolD 1936179 .. 1936195 +  -5.1  -2.98947   CTGATGGGGGCGGAG              TAATGGC GAT GCCTTTA              TCGTTATTAATTGGC  52 23
SH08_RS09535 NONE
SH08_RS09540 NONE
SH08_RS09545 1939588 .. 1939604 +  -6.5  -4.36063   AACCTAATGTGTTGG              TGCTGCC GGG GGGAGCA              TTTTCATGCTGTTGT  72 393
SH08_RS09585 1945939 .. 1945967 +    -9  -3.06133   GGAAGTAAGCGAAAA       G--GGATGCGGCAT GTG ATGCCGCATCCGGC       TTAAATCCAAACTTA  68 33
SH08_RS09630 1955257 .. 1955281 + -16.5  -5.46657   GTTTGTTAAATTTAT          TAACGGGAGCG TAA CGCTCCCGTTG          TTTTTTGTTAGGCTG 100 48
SH08_RS09645 1958516 .. 1958550 +  -7.8  -3.78312   GGTGAGAAATTCAAT     GTGGCGTTGAGATGCT TAA AGGTTCACAACGCTAC     TTTGCTCCATCCTTT  72 93
SH08_RS09665 NONE
SH08_RS09670 NONE
SH08_RS09675 NONE
SH08_RS09680 1964378 .. 1964390 +  -2.6  -2.79327   TCACATTGAGTCCTA                CGGG ATCCG CTCG                CTTTAACTGAGGTAA  42 7
SH08_RS09685 NONE
SH08_RS09690 NONE
SH08_RS09695 NONE
SH08_RS09700 NONE
SH08_RS09705 NONE
SH08_RS09710 1967930 .. 1967941 +  -5.8  -2.53715   TCTGCTTTTGAAAGT                TCGC ATCT GCGA                 CTTCATCATCATGAG  49 206
SH08_RS09725 1969189 .. 1969199 +  -2.6  -3.29854   GTCGTGAAAAATTGA                 TTAA AGA TTAA                 TATTATGCATGTTTT  46 117
SH08_RS09730 1970458 .. 1970482 +   -10  -5.05113   ATGTGTTAAATATTG          AAACGGGCGT ATAAC ACGCCCGTTG          TTTTATTTATGTGGA 100 446
SH08_RS09760 1974892 .. 1974908 +  -2.2  -3.12999   TGAATAATGCAACAG              CCTGAT TATTT AACAGG              TTAGCTATGAAGTCG  43 34
SH08_RS09765 NONE
SH08_RS09770 NONE
SH08_RS09775 1975955 .. 1975996 + -23.3  -2.62616   ATGTCCGCAATATCA GGTGTCAAGAATGGAGAGT TCTC GCTCTCCATTCTTGACGCC  TGATATCCCGCCTAA 100 126
SH08_RS09780 NONE
SH08_RS09785 1978156 .. 1978178 +    -7  -5.03994   TGCGCAAATAGTTGT           CAACCCTGGT GTT ATCACGGTTG           TTTTTATATATCACC  90 122
SH08_RS22965 1981432 .. 1981443 +  -5.8  -2.77899   TTTTAATATTGTAGT                CCTG CGCC CAGG                 TCATTGGTGCGAAAA  51 351
SH08_RS09820 1982781 .. 1982796 + -10.4  -4.54727   CCATCAACGATTAAA              CTGCGC TTCG GCGCAG               TTTTCGTTTACAGGA 100 41
SH08_RS09840 1985903 .. 1985917 + -11.4  -2.56046   CATTAACGTTTATGA               CGGGGA GAG TCCCCG               TCGGTTGACATTTAC  79 102
SH08_RS09850 NONE
SH08_RS09855 1986873 .. 1986903 +  -2.4  -4.34402   ACAAATAACCGATAT       CCGGCGGTGGCA TTATCTT TGTCGGCGCGGG       TTTTCATATCCACGA  58 33
SH08_RS09860 1987600 .. 1987628 +  -8.9  -3.09015   CGCGTTTTGTAATAC        TTTTTGCCGCC TGAAAGC GGCGGCAAAAC        TTGCATCGCTGTGCC  69 29
SH08_RS09865 1988226 .. 1988266 +  -4.1  -2.60615   AGCGCTCTGTCATAA  TGAGAGTTACCCGAT ACCTTATTATC AACAGGTAACTCTCA  ATCTTTAAAAAACGT  45 117
SH08_RS09875 NONE
SH08_RS09880 1991525 .. 1991535 +  -2.4  -3.28712   AGGCGACAAACACTT                 GCGG CAC CCAC                 TTATCCAGCGGCAGC  45 238
SH08_RS09895 1994537 .. 1994552 + -10.4  -5.80727   CGTTTAAAGAGCAAA              CCCCTC AAAC GAGGGG               TTTTTTGTTGTTTTT 100 48
SH08_RS09905 NONE
SH08_RS09910 1998913 .. 1998939 + -10.3  -3.53224   AGCCATTGCCCATGA         TAGTGTCCATT AAAAG GATGGACACTA         TTTCCCCGGAACCTG  80 132
        emtA 2002656 .. 2002670 +  -5.6  -4.58283   CGATGTAAATCAGTC               GCGCAC TTT GTCCGC               TTTTTCCCGGGCTTC  75 33
SH08_RS09935 2003852 .. 2003881 + -12.9  -3.59979   TAAGATTTTCATAAG       GCGGATAGCGATA CAGA TGCCGCTATCCGC        TTTCACATCAGAACG 100 38
SH08_RS09940 2004475 .. 2004532 + -10.6  -2.74563   AAAACCATAGCTATG GTGTTATCTGCCGACAACGCCATCCGG AGAAG CCGAATGACGTTGTCGG-AGTAAGCGC TGGTTAAGGTGTGGG  75 43
SH08_RS09965 2011867 .. 2011878 +  -4.4  -3.54146   CGATTTCTGATACAT                CAGA GTGA TCTG                 TATTTCATTCCGGCG  52 51
SH08_RS09975 2015499 .. 2015516 + -11.3   -4.6709   CGGTGAAATGAAAAA             TCCACGC AATT GCGTGGA              TTTTATATACTTTTG 100 192
SH08_RS09990 2017942 .. 2017971 + -11.5  -2.87963   AAATAATGCAGTTTG       CTGACCAGTCAGT TTGC GCTGACTGGTCAA        TCTCGTACTTATAAA  81 42
        hemA NONE
        prfA NONE
SH08_RS10025 NONE
SH08_RS10030 NONE
SH08_RS10035 2026961 .. 2026977 +    -3  -2.61216   AATAAATAACATCGC              GCATAA ACATA TTGTGC              TGCATTAATTAATCG  42 1
SH08_RS10040 2028197 .. 2028238 + -10.1  -4.78848   CTGGTTCAAGATTAG CCCCCGTTCTGTTGTCAGGT TGT ACCTCTCAAC-GTGCGGGGG TTTTCTCTTTCCAGC 100 347
        chaB 2030679 .. 2030691 +  -3.4  -3.15346   ATCGTAAAACCGGTC                GCTT AGTTA AAGC                TATTCGTGCGGTGTT  46 34
SH08_RS10065 2031981 .. 2031998 +  -4.1  -4.66264   ACTGCTTCTGCAGCG             TCTGACC AATC GGTCACA              TTTTTAAGGATTTTC  68 483
SH08_RS10075 2033572 .. 2033586 +  -2.8  -4.40894   CATTTTCTTCAGCAT               GTGC TTGACGT GCAC               TTTTACTGTGCTTTC  62 98
SH08_RS10090 2036204 .. 2036219 +  -4.8  -3.29324   AAAGTTATCTTATCG              TTTGAT TTAC ATCAAA               TTGCCTTTAGCTACA  53 46
SH08_RS10095 2037816 .. 2037834 + -12.4  -5.64274   ATTTGATTATCCTTT             GCGCGGCA TGA TGTCGCGC             TTTTTTTATGCGTCA 100 172
        narZ NONE
        narH NONE
SH08_RS10110 NONE
        narI 2044869 .. 2044884 +  -8.2  -5.60993   TTTAGTTCACATAGA              CCCTGC TTCG GCGGGG               TTTTTTTATGGGCAC 100 47
SH08_RS10120 2045733 .. 2045749 + -12.3  -3.57797   CCTCACCCTTCGGGC              CGTTGCC TGT GGCAACG              TTCTCTCGCTTTCGC 100 453
SH08_RS10145 2048450 .. 2048465 +  -7.6   -2.7264   GGACGAACTTTTGCC              GTTGGT ACGC ACCAAC               ATTTGACCAGAATTT  60 4
SH08_RS10150 2049693 .. 2049713 +    -4  -2.79796   CCTCCTTTTCAGAAC           TTAGC-CCC TTCG GGGTGCTGA            TATACTGGGATGCGA  46 142
SH08_RS10155 2050713 .. 2050734 + -12.3  -5.66684   GTGTTATCCACGAAA           CGGCGTTGA GCAA TCGACGCCG            TTTTTTTATAGCTTA 100 52
SH08_RS10165 2052804 .. 2052830 +  -9.3  -4.77165   TTTTGATATCTTAAC         CGACCTCGGCC TTGAT GGTCGGGGGCG         TTTTGTTATGAACAC 100 364
SH08_RS10185 2057583 .. 2057600 +  -8.4  -3.98113   TCCTTTCAAATGAAA             CGGAGC TGCCAT GCTCCG              TTTACTTCGTCATTA  77 42
SH08_RS10190 2059943 .. 2059971 + -15.3  -3.16187   AGCACTAATGGCAAT        ACGTGGGGCAGGA GTG TCCTGCTCCACGG        TGTCTGATTTTTATC 100 33
        oppB NONE
SH08_RS10200 NONE
        oppD NONE
SH08_RS10210 2063900 .. 2063919 + -13.6  -4.59773   CTTTAAAAACAATAA            GGGCTGAC AGTT GTCAGCCC             TTTTTCACGCTAAAA 100 35
SH08_RS10225 2066081 .. 2066119 +  -9.7  -2.50438   GCGATCTACAATATC   TAAATGTACTGGGCACC ATTGC GGTGCCCAATAAGTTTA   CTCTTCCGTCTTTAA  70 23
SH08_RS10240 2068936 .. 2068969 + -16.9  -3.14564   AATTCAGTAAGCAGA     AAGTCAAAAGCCTCC GACC GGAGGCTTTTGACTA      TTACTCAACAGGTAA 100 31
SH08_RS10260 2072178 .. 2072194 +  -2.2  -5.00138   GATCAAGAATAGTTT              CCAGTT GAACA ATCTGG              TTTTTGGTTTCACTA  71 423
SH08_RS10305 NONE
SH08_RS10310 NONE
SH08_RS10315 2083893 .. 2083919 +   -11  -3.01712   CAGACTTTACTATCA         GTGAGTCAGA TGTAAGT TCTGACTCAC         TGTTGCACAAAAGCA  79 155
SH08_RS10320 2084858 .. 2084878 +  -8.3  -4.62872   CGGTTAATCAAAGTA            TGCCGGA CGTCATA TCCGGCA            TTTTTACAGATTAAT  91 34
SH08_RS10340 2087512 .. 2087531 + -10.7  -4.58773   GATGTAAAAGACAAA            CGCGAGG CTAAGA CCTCGCG             TTTTGCTTTAATCAA 100 34
SH08_RS10350 2088026 .. 2088037 +  -4.4  -3.14848   CCAAGACCTGTTAAC                TCAG TCAC CTGA                 ATTTTCGTGAACAGA  49 4
SH08_RS10355 2090799 .. 2090816 + -10.5  -5.49234   GTTTTTATAAACAAA             GGGTCGC GAAA GCGGCCC              TTTTTTATTGCATAT 100 57
        cysB 2091965 .. 2091998 +  -9.7  -3.35613   AATTTCTTGCGTTAT     TTTCGGCACCTTT TATGTAGC GAAGGTGCCGGAA      TATATTCTCTTTTGT  76 39
SH08_RS10365 NONE
SH08_RS10370 2092797 .. 2092812 + -11.8  -3.66643   CTCACTGATCCTTGA              CCCCGC TGCG GCGGGG               TTGTCATTTGCTTTG  93 242
SH08_RS10380 2095635 .. 2095669 + -11.6  -2.52896   TTGAAGTAACAACTA     TTTGCTTGCCGG TTATTTTGCTT CCGGCAAGCAAA     TGAATTACACAATGC  79 32
SH08_RS10390 2097271 .. 2097296 +  -4.1  -2.90813   CAATGCGTGTGGATG         CCATTT-CGC AGACGGC GCGAAAATGG         TACTTTAAAGGGCTA  47 80
SH08_RS10395 2097664 .. 2097678 +  -2.1  -2.81738   GCACTCGTCAGCGGC               GAAGG AATAA CTTTC               TATGCTGGAGTTGTT  41 16
SH08_RS10400 2098832 .. 2098844 +  -2.6  -3.18031   ATTAAACCGATTCGC                GGTC TTGAT GGCC                TGTAATTTTTAAAAA  44 8
SH08_RS10405 NONE
SH08_RS10410 2100115 .. 2100134 + -13.6  -3.71687   CGGTTAACATAAAAA            GCCACGGA TATA TCCGTGGC             TTTCGAATATTTTAC 100 34
SH08_RS10435 2104352 .. 2104363 +  -3.6  -4.32857   CGCTGCGAAACGGGT                GTCG GTCC CGGC                 TTTGTCTTTCAGGAA  65 355
        puuD NONE
SH08_RS10510 2119692 .. 2119705 +  -5.3  -2.70932   GCGAATCCCGATGAG               CTTAC TCAG GTAAG                TGATTCGGGGGAGCG  49 127
SH08_RS10515 NONE
SH08_RS10520 NONE
SH08_RS10525 2124156 .. 2124170 +  -8.6  -4.77438   CCCTTGTTGCAAACT               GAGTTG CAG CAACTC               TTTTTCCTGCTGCAT  93 244
SH08_RS10535 NONE
        pspB 2126139 .. 2126155 +  -2.1   -2.5655   CATCCGAACTGGAGG              GATCGCT AAT GGCGGGC              ATTAATCTCAATAAA  39 17
SH08_RS10545 2126491 .. 2126511 +  -3.4  -2.62463   CACGTTACGTAGCCG           TTTCCGTCA ACTG TGA-GGAAA            GTTATGAATACTCGC  42 10
SH08_RS10550 NONE
SH08_RS10555 2127142 .. 2127157 + -11.8  -6.30182   AGAATTCACCATGAG              CGGCGC TTAT GCGCCG               TTTTTTTTTCTGTCA 100 42
SH08_RS10560 NONE
SH08_RS10565 NONE
SH08_RS10570 NONE
SH08_RS10575 2132065 .. 2132077 +  -2.7  -3.10597   GCTAAAGCGGCCAGT                TTCTT TAC AAGGA                GTTTTAAATGAAAAA  44 36
SH08_RS10580 NONE
SH08_RS10585 NONE
SH08_RS10590 NONE
SH08_RS10595 NONE
SH08_RS10600 NONE
SH08_RS10605 NONE
SH08_RS10610 2140120 .. 2140131 +  -2.2  -4.09739   GGCAACGGTAATATT                CTGT GGTG ACGG                 TTTTCCAGAAATTAA  56 172
SH08_RS10620 NONE
SH08_RS10625 2143699 .. 2143718 +    -5  -3.34517   CGAAAAATAATGCAA            TATCGGGT GCTG ACCGGATA             TCTTTACGCCGAAGT  53 31
SH08_RS10630 2145385 .. 2145425 + -12.7  -3.61609   GAACGAAGAGTAAGC  GCGAATATGCCTGATGGTG CAA CACCATCAGGCATATTAAA  TTATGCTTTCAGTAC 100 28
SH08_RS10640 2147291 .. 2147325 +  -8.4  -2.94365   AATGCGGTGTATAAG     CTGGCACAGCGCCTGG GTT TCAGGTTCGGAGCCAG     GTTTGTCACCTGTCA  61 300
SH08_RS10660 2150001 .. 2150014 +  -6.7  -2.80195   GGCTGAAGTATAAAG               GTGCT GTTT AGCAC                TACTTGCTGATACAT  57 15
SH08_RS10665 2150205 .. 2150215 +  -2.6  -3.05561   TTTTGGAGACTATTA                 TTTA CAC TAAA                 TCTGATTTGATATAT  43 5
SH08_RS10670 2151973 .. 2152000 +  -8.4  -2.74525   TTGATGTGATGGGAA        CTGGCGTTACCC TTGT GCATAACGCCAG         TGATGTCTGATTTAG  64 37
SH08_RS10680 2154368 .. 2154379 +    -3  -3.35996   ACCTTCCCTAACTAA                TCAA TGCG TTGA                 TTGTAAATCCAGCTA  47 180
SH08_RS10685 2154754 .. 2154771 + -12.7  -3.47751   AGTAAGTAAAAAATA             GGCCCGA TAAC TCGGGCC              TTGTCAGTTATTGAA 100 36
SH08_RS10725 2163047 .. 2163059 +  -9.1  -2.88069   GGTAATACGTTGTTG                GACCG ACC CGGTC                TGGTTATCATATCGC  67 302
SH08_RS10735 2164148 .. 2164187 +  -3.4  -4.75372   GTAATCCGGTCATCG  CGTCATGGTGAGCAGCATG TTC CA-GCTGCTCCTCCAGCCG  TTTTTGCTCAGTAAT  71 510
        zntB 2166344 .. 2166363 +   -10  -5.85178   ATTGATTCGTACGAC            GCCGACTT TGAT GAGTCGGC             TTTTTTTTGCCTGTT 100 215
SH08_RS10750 NONE
SH08_RS10755 2168063 .. 2168077 +  -7.1  -3.30243   GGGATTGCCGGATGC               GACGC TGGCC GCGTC               TTATCCGGCCTCCAT  64 83
SH08_RS10810 2176773 .. 2176791 +  -7.4  -4.11394   TGCCTAATTGATTGT             CAATAGGC TAT GCCTAATG             TTTTGAGCGTAACCT  73 518
SH08_RS10820 NONE
SH08_RS10825 2178204 .. 2178215 +  -2.2  -2.88366   GGCGGCGGTTCTTCC                GACG ATTC TGTC                 ATTGTTCATTAAGCA  41 2
SH08_RS10830 NONE
SH08_RS10835 NONE
SH08_RS10840 NONE
SH08_RS10845 2180786 .. 2180797 +    -3  -4.00042   TAACTACAATATGAT                TCAT TTTG ATGA                 TTGTTTCATAAGGAA  56 46
SH08_RS10850 2182443 .. 2182473 +  -8.3  -4.71426   TTACCAGCAACACCT      C-CGTCCCAGTAGC ACTG GCTGCTGGGGTGCG       TTTTATTCATAAAGC  91 108
SH08_RS10855 NONE
SH08_RS10860 2183095 .. 2183114 +  -4.2  -3.33261   GATACGATAAAAAAG            CCATAGCT GCCC AGCGGTGG             TTATCGGAGTTCGGG  51 20
SH08_RS10865 2183532 .. 2183547 +  -6.8  -5.55769   TTATGTCGCCTGAAA              CCCACT TCGC GGTGGG               TTTTTTGTTGTCAGG  91 149
SH08_RS10870 NONE
SH08_RS10875 2184816 .. 2184831 +  -3.2  -5.03747   GCAAACACATCGAAT              CAGCCT ATTT AGGCTA               TTTTTTCCACCATTT  71 117
SH08_RS10885 2186132 .. 2186151 + -12.1  -5.26316   CACAGTGTTATGACA            GCCCGCC GGTTCA GGCGGGC             TTTTTTGTGGGGTGA 100 53
SH08_RS10900 NONE
SH08_RS10905 2190184 .. 2190196 +  -3.4  -4.78477   GGAAGACGTAAAGCA                TCTC ACACC GAGA                TTATTTTTTATATGT  68 103
SH08_RS10935 2198669 .. 2198714 +  -3.3  -4.88736   AAAGCGGTTACACAT GCTGCCGGAAATCATCATT TTTTCACC AAAGCTGATTTCTGGCGGA TTTTTATCGCTGGTC  74 250
SH08_RS10950 NONE
SH08_RS10955 NONE
SH08_RS10960 2203467 .. 2203493 + -15.3  -3.34192   ATCTGTTTTAACTAA         TTGGCGTTGCA GTACA TGCAACGCCAA         TTAGTTAGCGGAATT 100 166
SH08_RS10970 2206163 .. 2206177 + -11.4  -5.71712   CTCATAAGTAAAAAA               CGGCAC CTG GTGCCG               TTTTTTTGTCTGAAA 100 50
        paaA NONE
        paaB NONE
SH08_RS10995 NONE
SH08_RS11000 NONE
SH08_RS11005 NONE
SH08_RS11010 NONE
SH08_RS11015 NONE
SH08_RS11020 NONE
SH08_RS11025 NONE
SH08_RS11030 NONE
SH08_RS11035 2220556 .. 2220612 +  -5.3  -2.89534   AATATTGTTGGTGCC TGACGTATCG---TCTGGCCCTGGTG GGGTAAAG CGCCAGGGCCAGAAGTCGATACGACC TGTGCTATGATTCAT  50 23
SH08_RS11040 NONE
SH08_RS11045 2222213 .. 2222243 +  -9.3  -4.49906   TTGTCCCTTTAATTA      TAAAGCAGAG-TTA TGTT TAAGCTCTGCTTTA       TTTATTTGAGTATTA  95 57
SH08_RS11050 2225131 .. 2225143 +  -4.1  -3.44051   ACCCAGCGCACTATG                CGGAT GCC ATTCG                TTATAATGCTCGAAC  52 119
SH08_RS11065 NONE
SH08_RS11070 2231156 .. 2231179 + -11.8   -5.7946   CATGTGATCCCTAAA          CCGCAACGCTG ATA CAG-GTTGCGG          TTTTTTTATTGCCGG 100 48
SH08_RS11075 2232215 .. 2232232 +  -5.6  -6.28401   AACGAATATACAAAA             GGGAAA GATGCA TTTCCC              TTTTTTTCTTTTTTA 100 39
SH08_RS11080 NONE
SH08_RS11085 NONE
SH08_RS11090 NONE
SH08_RS11095 NONE
SH08_RS11100 2239390 .. 2239404 +  -3.4  -4.18494   TTATGCAGAAACAAT               GCTGTC GAT GGCTGC               TTTTGCGTCAGACTG  58 94
SH08_RS11110 2244074 .. 2244091 +  -3.4  -3.68351   GGCGATGGAGCAGAT             TAGCGG TTAACC CTGCTA              TTTGCCTGATAAAGA  51 16
SH08_RS11115 NONE
SH08_RS11120 2246927 .. 2246939 +  -6.9  -3.00017   TTCACCAGTTGTAAA                TCGCC CAC GGCGG                TAATTTCCGTTTGCG  56 161
SH08_RS11140 NONE
SH08_RS11145 2249255 .. 2249286 + -11.6  -3.52009   CTAGGTTCATTCGTT      GGCCTCGGTTGATA GAAA TATCGGTCGGGGCC       TTCGTCTTTCTGATT  89 310
SH08_RS11155 2251388 .. 2251417 +  -5.6  -4.07568   TCCCGGAACAGGCAG       GGCCACCAGCGT GGCATG ACGCAGGTCGTC        TTTTACAGCGCCAGA  65 183
SH08_RS11165 2253854 .. 2253866 +  -2.7  -3.74762   TGCATATTCTCTCAG                TTCAA CAA TTGGA                TTATTAATAAATATT  52 128
        mdoD 2255644 .. 2255667 + -14.6  -2.90075   TAATCGTTTTTTCTT          CGGCACCTTC TTCG GGAGGTGCCG           TCTGGTTAAACACGA 100 38
SH08_RS11180 2256006 .. 2256022 + -10.8  -5.02074   TGTAAACTTTCCTAA              GCCGCC AGCCA GGCGGC              TTTTTTAACAACTGC 100 36
SH08_RS11185 2257008 .. 2257020 +  -3.3  -3.05596   TGGCAAAATCAAAAA                CTTCG GCG CGATG                TTCAATAAAAGCATA  43 436
SH08_RS11195 NONE
SH08_RS11200 NONE
SH08_RS11205 2260253 .. 2260272 + -13.6  -4.85599   AAAGTAGTTCCAGAC            GCGCCATC GTTA GATGGCGC             TTTTTATCCGGTGCG 100 34
SH08_RS11210 2260730 .. 2260740 +  -4.6  -5.04249   ACAATGCCTTCCACG                 CCGG ATA TCGG                 TTTCTTTTTTCACAG  81 275
SH08_RS11220 2262352 .. 2262369 +  -4.8  -2.73124   CAACGTTGATCTTTA             TCCGGA TGCGCT TCCGGG              CTTTGGCAAATAGCC  46 393
SH08_RS11230 2263856 .. 2263876 +  -6.1  -4.63527   TTCGCAACGTCGCGC            TTGTGGCTA AAA TAGCCGCCA            TTTTTCAGCTACTGG  77 54
SH08_RS11235 2266355 .. 2266372 +  -7.1  -4.30177   AAATTACACACGGAG             GTAAACA CTAA TGTTTAC              TTTGTTGATATACTC  75 519
SH08_RS11245 2266567 .. 2266577 +  -3.2  -3.15579   GCAATCCTGAAACAA                 CTCG GTT TGAG                 TTAATCGCCAATTAA  46 11
SH08_RS11250 2267060 .. 2267077 +  -2.7  -2.63596   TACAGTTAACGAAAA             GTTGTCA TTTT TAACAAC              TGATATAGACTGCCG  41 42
SH08_RS11255 2268522 .. 2268532 +  -3.2  -3.08036   ACTTATTCAAGAACG                 GCTG TAA TAGC                 GTTTAATTTAATTCC  46 19
SH08_RS11260 NONE
SH08_RS11265 NONE
SH08_RS11270 2271870 .. 2271900 +  -2.6   -3.4331   GTTCGTGAAACGTCT      GG-GAGCGTTC-GA TGCAC TCTGAACGCGCACC      GTTTTTCCTCAAACT  48 4
SH08_RS11275 NONE
SH08_RS11280 2274138 .. 2274162 +  -4.3  -2.62263   GATAATATTGCAGAT          CGTAAGAGTAT GAG ATGATCTTGCG          TACTGTCAGAGCACT  45 42
SH08_RS11285 2274450 .. 2274466 +  -2.2  -2.60992   GAAAAAACTTGATGC              ACGTCA AAAAA TGACGC              ATATTTGCGCGCGTT  40 126
SH08_RS11290 NONE
SH08_RS11295 2275367 .. 2275385 +  -3.1  -2.52623   GGTAGAGGAGGTCTG             GGTGATG CGCAC CATCAGC             GTGTTCTGGACAACC  40 392
SH08_RS11310 2277158 .. 2277176 +  -5.2   -2.7728   ACTTCGGCAAAGTGG             TGATCCGC GTG GCGGGTGA             TGATTAAAGTTTCAA  50 0
SH08_RS11315 2278286 .. 2278299 +  -5.9  -3.76811   GACGAGAGTATAAGA               CGGCG CTTT TGCCG                TATTTTCATCATCTG  63 265
SH08_RS11325 2281569 .. 2281591 + -14.9  -4.19953   GTCAGTAATCTGAAT           TTGCCCGGC ACGTA GCCGGGCAA           TTTTGCAATTAACTC 100 107
SH08_RS11335 NONE
SH08_RS11340 2284758 .. 2284776 +  -5.4  -4.35992   CAAACCATCATTCAT             TTCAATGA TTG TTATTGAA             TTATTTATTGTTGTG  68 512
SH08_RS11345 NONE
SH08_RS11350 2287602 .. 2287631 + -11.7  -3.62354   GGCAGGGCAAGATCA       TGAAAATTGTGAT GTAA ATCACGATTTTCA        TCTTTGCTTTAACGC  90 104
SH08_RS11355 NONE
SH08_RS11360 2290075 .. 2290085 +  -6.8  -3.87104   GGGCTTTCGTAATCT                 TGCC CTG GGCA                 TTATTGTCGTATAAA  67 29
SH08_RS11365 NONE
SH08_RS11375 2292001 .. 2292032 + -16.6  -2.52795   TAATTTATGTCAGGT      TGCCGGATGCGGCG TAAA CGCCTTATCCGGCA       TACATTAGCCCGGTT 100 38
SH08_RS11425 NONE
SH08_RS11430 NONE
SH08_RS11435 NONE
SH08_RS11440 2309130 .. 2309161 + -13.9  -3.21395   TTTTGAACTTTAAGC      TGAAAATGGCGCT GTAAAA GGCGCCATTTTCA       TATTGTAGACAACGT 100 45
SH08_RS11470 2314190 .. 2314217 + -11.3  -3.67558   AGCATTGCCGGATGA        CGCGTCAGGCG CGTGAA TGCCTGATGCG         TTGTTAGCATCTCTA  90 41
SH08_RS11630 NONE
SH08_RS11635 2361156 .. 2361166 +  -6.8  -3.09803   TAAAAAACGGGAGGC                 CGCA TAA TGCG                 TATTCGCTACGGTTG  59 19
SH08_RS11640 2362147 .. 2362171 +  -2.1  -2.54732   GGGCCAATAACCCAT          TGCCATAAAGG ATA TCTTCATGACA          CTTCATCGCTTTAAG  39 18
SH08_RS11645 NONE
SH08_RS11650 NONE
SH08_RS11655 NONE
SH08_RS11660 2365697 .. 2365710 +  -5.3  -3.07043   CGAAGCCAGTACACG               CTGAA GATC TTCAG                TCTTGAGATAATGAG  53 503
SH08_RS11670 2366638 .. 2366650 +  -3.3  -3.80893   GAAAGTAAGGCGCGC                CGGAA GTG TGCCG                TTTGCCTTCTGCCCT  53 376
SH08_RS11700 2372802 .. 2372814 +  -2.7  -3.68936   AGGGATATCAATGAG                CTATT TTT GATAG                TTCTTGCGGTTAATA  50 27
SH08_RS11705 NONE
SH08_RS11710 2375340 .. 2375353 +  -9.5   -5.1861   ACGCAATAGTTGAAA               GGCCC ATTC GGGCC                TTTTTTAATGGTACG 100 32
SH08_RS11720 NONE
SH08_RS11725 NONE
SH08_RS11730 2377331 .. 2377348 + -12.7  -3.73068   ATGTAGTTTGTTCTG             GCCCCGA CATC TCGGGGC              TTATTAACTTCCCAC 100 35
SH08_RS11740 2379609 .. 2379625 +  -5.7  -4.40298   GATTCGAGCAAGACC              GTGGGGG CAG CCCGCGC              TTTGTTGATTTAAGT  70 1
SH08_RS11745 2379880 .. 2379916 + -10.2  -4.82901   ATAATCCCTCACCTA   ACCGGCCCCTTGTTACA GTTG TGTA-CAAGGGGCCTGA    TTTTTATGACGGCGA 100 50
SH08_RS11760 2382409 .. 2382437 + -13.9  -2.58292   TTACTGCTATAACCA        GGCTGGCCTGG CGATATC TCAGGCCAGCC        ATTGGTGGTGTTTAT  95 29
SH08_RS11770 2385384 .. 2385401 + -10.5   -3.8591   TCAGTAATTTTTATA             CCCGGCG TAAC TGCCGGG              TTATTGCTTGTCACA  86 34
SH08_RS11775 2386159 .. 2386182 + -13.2  -3.63922   AGAGTAATTCATTTC          CTCTCATCCC ATCC GGGGTGAGAG           TCTTTTCCCCCGCCT 100 34
SH08_RS11780 2386537 .. 2386560 + -11.8  -5.26875   ATGAACTAAGCGTGT          G-AATGCCGCC GAT GGCGGCATTGC          TTTTTTACTTCACGG 100 32
SH08_RS11795 2390577 .. 2390587 +  -2.6  -2.77118   CCGAGTTAAAGCCAT                 TTTT CAC AAAA                 TCGATTTTGGGTCTC  42 185
SH08_RS11800 2391580 .. 2391596 +  -6.5  -5.80003   CAATATGCTCACTGG              CTACCTG CAT CAGGTTG              TTTTTTGTTTCTTCC 100 281
SH08_RS11820 NONE
SH08_RS11825 2394676 .. 2394691 +  -4.6  -3.93984   TCAAATATAACAAAA              CCCCGT AAAA ACGAGG               TTTATGGATAAATTT  61 132
SH08_RS11870 2399468 .. 2399499 + -10.2  -5.08601   ATTGCCCCATTTAAA      GCACAAAACCCGCT CATC AGCGGGTTTTCTAC       TTTTTCTTAACGTCG 100 314
SH08_RS11910 2403864 .. 2403882 + -11.7  -4.11216   AGTGACAGCCGTATT             GTGGCCC TCATC GGGCCAC             TTTTCGCCATCAGCC 100 40
SH08_RS11925 2405449 .. 2405471 +  -4.3  -4.09864   AGCGGACAAATAAAA          GATAACATCA TCAA TGA-GTTATC           TTTTACCACATCAAT  61 21
SH08_RS11930 2405847 .. 2405863 +  -2.1  -3.53343   CCGAAGGCGAAGAAG              CTCTCAG CTT CAGTGAG              TTTAAACAGGCGCTT  47 97
SH08_RS11935 2406417 .. 2406434 +  -6.9  -3.36492   CGGGGTTATTCCTTC             CCCGTTG AGGA CACCGGG              TTGTCAGGTTGACCA  59 289
SH08_RS11945 NONE
SH08_RS11950 2407450 .. 2407461 +  -2.2   -4.4017   AAACCGCTGGGATGA                GGAG TCTG CTTC                 TTTTGTCCCGGTTGA  60 378
SH08_RS11960 NONE
SH08_RS11965 2410120 .. 2410132 +  -3.4  -2.94032   GTAATTAATTTTTCT                GGTT TAATT AACC                CTTTACTTAACCAGT  42 325
SH08_RS11985 NONE
SH08_RS11990 2413894 .. 2413909 +  -4.6  -4.36411   TTTTGATGGTGTAAA              CCCGTT CGAC GGCGGG               TTTTACTCCTTCATC  67 63
SH08_RS12000 2414999 .. 2415021 +   -12  -2.74144   ACATTATCGACTGAA           CGCCGGATAT GAC AAATCCGGCG           ATTTGAACATACAAC  83 42
SH08_RS12005 NONE
SH08_RS12010 NONE
SH08_RS12015 NONE
SH08_RS12020 2421583 .. 2421600 + -12.7  -2.76315   CAGGTTAACAAATTG             GTGCGGG GCAA CCCGCAC              ATTTCAGGATGTTAG  89 33
SH08_RS12025 2422209 .. 2422221 +  -9.1  -3.41073   CTGTTAATTCCTGTC                GCGGT TAA ACCGC                TGTTTCGATAGGATC  73 2
SH08_RS12030 2424074 .. 2424087 +  -3.1   -4.4846   ATTGATTGGGCAACT               GT-GCG CCA CGCTAC               TTTCTTCTTCGCTTA  65 416
SH08_RS12050 2428072 .. 2428101 +  -9.4  -3.62597   ACGCCTGAAAAATAA      GTCCGGACTGCGGT AAAT ACC-C-GTCCGGAC       TTATTGCCAGCTCAA  78 33
SH08_RS12055 2428841 .. 2428871 + -11.9  -2.71924   TCGCGCCTGAAAATT       ACGGTGCTAAGCG GGTAA CGTTTAGCACCGC       CTTTAGCGGAGGGTA  83 70
SH08_RS12060 NONE
SH08_RS12065 2429902 .. 2429925 + -15.3  -3.13403   AAAATAATGTTCAAA          CGCTGCCCG ACAGCG CGGGCAGCG           TCTTCATCAGGCAAG 100 34
        tqsA 2432188 .. 2432200 +  -4.1  -3.53811   CACCAGCATAGCCAG                TGTTC ATC GAACG                TTTAAAGACAATCAC  51 154
SH08_RS12095 2436504 .. 2436520 + -10.8  -3.81062   CAGTTACTCCTATAA              GGCGGC TTGAT GCCGCC              TTTCGCATTTTTAGT  88 46
SH08_RS12100 2438041 .. 2438065 +  -5.7  -3.05384   CGGCGACCTGGATGC          TGGTGGGATAA CGT TCATCCCATCG          TTGGATAGCAAAGGA  54 15
SH08_RS12105 2438802 .. 2438815 +  -4.5  -2.92102   GATGGCGGTCGTCAT               CTGCG TTAA TGCAG                CTTTATCCAGCATAT  50 17
SH08_RS12115 NONE
SH08_RS12120 2441351 .. 2441365 +  -3.6  -2.53119   AAAATAAGTATGTTG               TAACTA AAG TGGTTA               ATATTATGGCGCGTT  44 81
SH08_RS12125 2442744 .. 2442759 +  -5.4  -4.11484   TTTCCCCGGCATGAT              TGAGCT GCCC GGCTCA               TTTTCCGGGATTGAG  65 469
SH08_RS12140 2446921 .. 2446941 + -12.6  -4.27483   AGGCTTATAACACCT            TCAGGCGG CCAGT CCGCCTGA            TTTCATTTTATGGAT 100 83
SH08_RS12145 2448486 .. 2448509 +   -11  -4.34402   AATTCACGGCCAAAA          CGCCGGAG AATTTTCA CTCCGGCG           TTTTCATCTGAAAAC 100 39
SH08_RS12180 NONE
SH08_RS12185 2459241 .. 2459282 +  -8.7    -4.652   CCGCGCTGTTCGTTA ACCCCAATTGCGCAACG TAAAAAAT CGTTGCGCAATCGTGGA  TTTTTACCCTGCTTT 100 25
SH08_RS12190 2460352 .. 2460375 + -15.4  -4.72272   CGCGAAGTAACAAAA          TGGATGGTGC AAAT GCACCATCCA           TTTTTCATGCAAGGC 100 31
SH08_RS12200 2461809 .. 2461831 +  -6.3   -4.3208   GCACTTGTGGAGCGA          CATGCTGCCC GTCC GGGT-GCATG           TTTTCACTTGTCGGA  72 46
SH08_RS12205 NONE
SH08_RS12210 NONE
SH08_RS12215 NONE
SH08_RS12220 NONE
SH08_RS12225 NONE
        rnfD NONE
SH08_RS12235 NONE
SH08_RS12240 NONE
SH08_RS12245 2469277 .. 2469296 +  -7.9  -2.52234   GACATCTGAAGAAAA            GGGGTAA CACCGA TTACCCC             ATTGATAACCTTTCT  60 32
SH08_RS12250 2469662 .. 2469672 +  -2.6  -3.57792   AATCTGCCGTTACGT                 TTTT TGA AAAA                 TTTAACGCTGGATAA  50 89
        tppB 2471406 .. 2471428 + -13.5  -6.36459   GAAACTCTTTTACAA           GCCGCTAAC TTTTC GTTAGCGGC           TTTTTTTTTGTTCAG 100 49
SH08_RS12260 2472101 .. 2472114 +  -5.9  -3.28924   TAAAGTAATAGCCAT               CGGCC CACA GGTCG                TTGTGGGCCGAAATG  57 33
SH08_RS12290 2477459 .. 2477494 + -11.8   -3.5332   CTCCGCGCTAAATAA    GTTTGCGTGTGGTCAG GTTA CTGACCACACGCCCCC     TTCATTTCACCCTTT  91 30
SH08_RS12300 NONE
SH08_RS12305 NONE
SH08_RS12310 2481493 .. 2481520 + -11.2  -3.69902   TTTGTGGATCAAGAT        GCCCGC-CTGCGG ATT CCGCGGCGCTGGC        TTTGCCATCTTTGGT  81 274
SH08_RS12330 2483720 .. 2483739 +  -4.9  -5.24129   AAAACATTATTGCGA            CGCCTGC CGTTTA GCAGGCA             TTTTTTATCACCAGA  80 12
SH08_RS12335 2484881 .. 2484898 +  -9.8  -2.78384   AATCCAACATTGCGA             GCGGCG TAAAGC CGCCGC              TATACTAAAACAACA  72 39
SH08_RS12340 2485361 .. 2485388 +  -9.9  -3.46647   GGGCAACTAATCTCC        TGCCGGGCGTGA ACTCA TCGCGCCCG-CA        TCTTTACTGCATCGA  78 31
SH08_RS12345 2486113 .. 2486144 +  -7.4  -2.79679   AGGTGTAATCGAGTC      GATGCCTGATGACAT GCA ATGAT-TCAGGCATC      TATAGTGAGGCTATT  59 33
SH08_RS12350 2490823 .. 2490850 + -15.7  -3.01791   GGGATAGAGAAAGGA        CTGACGGATGC CCGTTC GCATCCGTCAG         TATTGCAGGACGGAT 100 34
SH08_RS12360 2492365 .. 2492394 + -12.3  -3.59432   ACACTTCGCTAAAAC       TTTACCCTGTTGT TACG GCAACAGGGTAAG        TTCATCTTTTGTCTC 100 29
SH08_RS12365 2493199 .. 2493220 + -14.5  -5.38326   TGTCAGCAACTGTAA           CGCAGAAGG TTAT CCTTCTGCG            TTTTTGTTTAATTAG 100 154
SH08_RS12380 2495982 .. 2495996 +    -7  -3.07895   ACTATCGTCGTTAAT               CACCCG TTG CGGGAG               TCTCTTCCGGCTCCC  59 27
SH08_RS12390 2498433 .. 2498452 +  -7.1  -2.91276   ACGTCGGATTATAGA            CTCGCGG TTTTTT CTGCGAG             ATTTCTCACAAAGCC  61 225
SH08_RS12395 2499684 .. 2499704 +   -14  -3.60475   CTAAAGGCTATTCTA            TCGCCCCC TCTCC GGGGGCGA            TTTCAGATCAGGCTT 100 37
SH08_RS12405 2501949 .. 2501976 +   -12  -3.90048   CCCGCTAATAAAGAC        AAGGCGCAACCT TCAC GGGTTGCGCCTG         TATTTTTACGCAGGC 100 33
SH08_RS12415 NONE
SH08_RS12420 2503701 .. 2503719 +  -7.5  -3.45037   GTCCACTCGGACGCA             CCAGATT TTCTT AATCTGG             TCTTCTCCTTTTTCC  66 23
SH08_RS12425 2504131 .. 2504145 +  -8.5   -4.3014   ACAGAATTTAATCAA               GGGCG GTTAG CGCCC               TTTTCATCCCTGTCT  82 40
SH08_RS12430 2506097 .. 2506110 +  -8.1  -2.72144   CAATTCTGGCGTTTG               CGCCA AAGC TGGCG                ATTTGCACCAGGTCA  57 276
SH08_RS12470 2514254 .. 2514269 + -11.8  -5.99154   AATTTGTATATCGAA              GCGCCC TGAT GGGCGC               TTTTTTTATTTAATC 100 58
SH08_RS12475 2514790 .. 2514808 + -14.6  -6.02914   CTGTGAAGTGAAAAA             TGGCGCAC ATT GTGCGCCA             TTTTTTTTGTCTGCC 100 47
SH08_RS12530 2527305 .. 2527325 + -16.9  -3.61517   ATAAGTAATTTCTCA            TCAGGCGGC TCT GCCGCCTGA            TTGTTAACCACCGCT 100 33
SH08_RS12535 2528122 .. 2528150 +  -3.1  -3.33922   TTGTTACAACAATAA        TGAACGGATGCTG ACA CAACATCGCTTCA        CTTTTTAAAGCACCT  47 65
SH08_RS12540 NONE
SH08_RS12545 NONE
SH08_RS12550 NONE
SH08_RS12555 NONE
SH08_RS12560 NONE
SH08_RS12565 2535463 .. 2535498 + -14.7  -2.91276   AGAACAAATAATCTG    CAGGCGGCGCAGCTT CTTAAC AAACTGCGCCGCCAG     ATTTATCCAACAAGA 100 30
SH08_RS12580 NONE
        fixB NONE
SH08_RS12590 NONE
SH08_RS12595 2540098 .. 2540118 +   -14  -2.69057   TAATCATGCATCCCA            CAGGCCCG CATCT CGGGCCTG            ATGTTCTGTTTCGAG  95 38
SH08_RS12600 2541811 .. 2541837 + -10.7  -5.02645   TTCGGGGATCACATA         ACCCCGGCGAC TAAAC GCCGCCGGGGA         TTTATTTTATTTCTT 100 49
SH08_RS12615 2545376 .. 2545405 +  -4.3  -4.98468   CATGGGCCTTAGTCG       CCGAATGTACTAG AGAA CTAGTGCATTAGC        TTATTTTTTTGTTAT  74 13
SH08_RS12620 2546597 .. 2546620 + -15.4  -3.86822   CCGCTTCTGAATGCG          TGCCCATTCC TGAC GGAATGGGCA           TTTCTGCGCAACTTG 100 31
SH08_RS12625 2547291 .. 2547326 +  -5.4  -3.64164   TAATCGCTGCGCTCT    CGCGCCATCAGACTGAA TAA TTCATTCAG-TAGCGCG    TTATCCTCTTTTTGC  58 402
SH08_RS12700 NONE
SH08_RS12705 2562672 .. 2562684 +  -9.1  -3.67141   GCCCCGGAGGCATAG                CCCAG CGG CTGGG                TTTCACTGGCATTGT  73 316
SH08_RS12715 NONE
SH08_RS12720 NONE
SH08_RS12725 2565783 .. 2565799 + -10.8  -4.43477   TGGGTTGAGGATAAT              GGCCGC TCCGT GCGGCC              TTTTGATTAAATAAA 100 43
SH08_RS12735 2567161 .. 2567188 + -19.2  -4.15029   CTTCTCGGTTAATGA        CCAGGGGCAGTG ATCT CGCTGCCCCTGG         TTCTTTATCTGAAAT 100 29
SH08_RS12740 2567931 .. 2567947 +  -5.2  -3.70902   CAAAAATCACCTTTC              TGGAAT AAGCA ATTCCA              TTTGAATATAAGAGC  59 46
SH08_RS12745 2569445 .. 2569477 + -12.7  -3.83644   ATTAATTCTTATGCT      GGCAACGGTCCGTTT TGT ATAGGGGCCGTTGCC      TTACTTTTTAAATGT 100 36
        katE 2573238 .. 2573267 + -13.5  -2.95116   AAAATTCCTGCCTGA       TGGGAGGCGGCGC AATT GCGCCGCCTCAAA        TGATTTACATAGTGC 100 26
        nadE 2580432 .. 2580459 +   -12  -2.78371   GCGAAAAAGAGTAAT        TTGTTCACGCCG GATG CGGCGTGAACGC         CTTATTCGACCTATA  73 63
SH08_RS12810 2581954 .. 2581999 + -10.5  -3.53761   CCAGTAAAAATCACG TTTTGCCGGTGGGAACGTGCAA ATT TCGCGCGTTTC-ACCGGCAGCA TTTCGCCACAGATTC  78 468
SH08_RS12850 2590336 .. 2590352 +  -6.5  -2.80816   TCTGGGCGACCTTCC              GCCGCTA ATT TAGCAGC              TCTCCTGGCTCAAAC  55 18
SH08_RS12855 NONE
SH08_RS12860 NONE
SH08_RS12865 NONE
SH08_RS12870 NONE
SH08_RS12875 NONE
SH08_RS12880 NONE
SH08_RS12885 2596501 .. 2596514 +  -2.3  -2.70788   GAAAATTACAACAAA               CTGCG ATAA CGCAA                AGTTTTTCTCAATGC  40 17
SH08_RS12890 2598095 .. 2598107 +  -2.7  -4.26076   GTGCATAACCGGGGT                TATCA ATC TGATG                TTTTGCTGCCAGTGC  60 237
SH08_RS12900 2599129 .. 2599154 +  -7.5  -2.66272   GGCTGCGCTGACTGC         CCGCCTGAACT GAAC ACTTCTGGCGG          TACGTTTACCTCCAC  56 148
SH08_RS12910 2600961 .. 2600976 +  -3.2  -4.30719   GTATTTAACGGATGA              TGCTCC CCAC GGAACA               TTTCTTATGGGCCAA  61 163
SH08_RS12940 NONE
SH08_RS12945 2607812 .. 2607841 +  -9.4  -5.08824   CGTTAAGTCTTGTAC       TGA-GTGGCCGAC AGATC GTCGGCCACATTA       TTTTTTACGTCGACG 100 35
        ansA NONE
SH08_RS12955 NONE
SH08_RS13010 2620902 .. 2620919 + -11.3  -5.82316   ACTGTGATCTAAAAA             GAGCGAC TTCG GTCGCTC              TTTTTTTTACCTGAT 100 52
SH08_RS13015 2621828 .. 2621839 +  -4.4  -3.57507   GGCGCAATCCATTCG                CGTT GCGA AACG                 TTAATTTACGTTAAT  54 10
SH08_RS13030 2625927 .. 2625942 +    -4  -2.73875   ACTGTGCGAATGGTA              TTTGCG CGTA CGTAAA               TCGTCTTAACAACCC  46 1
SH08_RS13035 2627353 .. 2627379 + -11.6  -4.76892   TAAAGGCTAAAACTA         TCAGCCAGGTCA TTA TCGCCTGGCTGA         TTTTTAGCTTACTGT 100 31
SH08_RS13040 2628987 .. 2629005 +  -8.1  -4.20106   GCAAAAATATTCAGA             GCCATGC TTTTT GCGTGGC             TTTTGCATACAATTT  76 43
SH08_RS13045 NONE
SH08_RS13050 2631425 .. 2631436 +    -3  -4.61482   GCAGCAAGCGTAAAG                TAAG CAGG CTTA                 TTATTTTTTGGCAAG  65 264
SH08_RS13060 2631926 .. 2631947 + -11.5   -4.1711   ATCTCGCAATATATC           GGCCTGGCG TTTG CCCCAGGCC            TTTCTTAAACATAGT  93 44
SH08_RS13070 NONE
SH08_RS13075 2634527 .. 2634560 +  -3.8  -3.72984   TCTGCTGGCAATAGA     CCGACGCCGGATTTG CCATA CCAATCT-GCGGCGG     TTTAGGTGCTTCTGG  56 187
SH08_RS13085 2635836 .. 2635853 +  -3.3  -3.09131   TTGTCGCGCATCCAG             CGCTACA TTCC TGAGGCG              TATTCACATCCTTTT  46 12
SH08_RS13090 2636081 .. 2636098 +  -8.4  -3.95219   CTAAAAAATAGCAAA             GGCTGC CTGTGT GCAGCC              TTTGTGCAATTTAAG  77 126
SH08_RS13120 2640127 .. 2640143 + -13.7  -5.87996   ACCAGTTTATTTGAA              CCGCGTC ACT GACGCGG              TTTTTTTATTCGTTC 100 47
SH08_RS13125 NONE
SH08_RS13130 2642918 .. 2642933 +  -4.6   -4.7373   TCGGCGGCGGTATTT              TCCGCC GCTG GGCTGA               TTTTTGATGGAGTAC  71 46
SH08_RS13135 2643919 .. 2643969 + -18.3  -4.26344   GTGTTGGATTTGTAG TTTGCCGAAGCCGGATGTGGCGC TGAGC GCGCCCAGTCCGGCTTCGGAAGA TTTTACTGCGGATAT 100 26
SH08_RS13165 2651213 .. 2651223 +    -4  -3.06515   ATATAGCCTTATCGA                 TAAC ATG GTTA                 ATTTTAAGGATAAGA  47 419
SH08_RS13170 2651570 .. 2651600 + -11.3  -4.84359   AGCATAAATGGGTCA       GGACGCTTTTAAT CACAT ATAAAAAGCGTCC       TTTTTCTCACAATCA 100 55
        pabB NONE
SH08_RS13185 2654002 .. 2654021 +  -6.4  -2.58427   CGCTGTTATTAGTTC            GTTACTGG AAGT CCAGTCAC             CTTGTCAGGAGTATT  54 171
SH08_RS13190 2655414 .. 2655440 +   -13  -3.88583   GACTAATACTTCTTA         CTCGCCCATCTG CAA CGGATGGGCGAA         TTTATACCCGCTTTC 100 35
SH08_RS13195 2657123 .. 2657135 +  -6.3    -2.567   TCACGCCCATTATGC                CGTTA CGT TAACG                CTTACTCATCTTCAT  53 15
SH08_RS13210 NONE
SH08_RS13215 NONE
SH08_RS13220 2661871 .. 2661888 + -14.1  -5.71712   ACTGTTGTACACTAC             CGGGGCC TTTT GGCCCCG              TTTTTTTATCTGGAG 100 42
SH08_RS13225 2662378 .. 2662429 +  -9.8   -3.1577   AATAAGTTATGAATT TAGCCAAAGCTATGTTTAGTGTATT TTT AATA-ATCAGACATAGCTTAGGCTA TATTACCTCTTCCCT  74 36
SH08_RS13230 NONE
SH08_RS13235 2663778 .. 2663799 +  -4.3  -4.43501   CACAAAAAGTGACCT           GCGGATAGCG TTT CGCCG-CCGC           TTTTATCGCTACCTT  67 441
SH08_RS13255 2665067 .. 2665084 +  -9.9  -2.65354   ACCCTAAAGAGAAGT             CAATCCC CAAA GGGATTG              TAAATTTAAAATAAG  71 225
SH08_RS13270 2666376 .. 2666406 +  -6.9  -3.29471   CTCATGCTAAATAAA       GAACCTGTCTG TTTGATATT CCGACAGGTTC       TTACTCTCATCAGAA  61 129
SH08_RS13280 2668763 .. 2668782 + -10.7    -4.946   CAGGGCATAAAAAAA            GCGCGTC GATCAG GACGCGC             TTTTTAGTATTTACT 100 31
SH08_RS13305 NONE
SH08_RS13310 2677259 .. 2677284 + -14.7   -3.9712   CCAAATAATGCCCAC         TGCTCCGGCGT GCCT GCGCCGGAGCG          TTTATGCTAAACTGC 100 33
        yebU 2678773 .. 2678789 +  -2.2  -2.63208   CGGTAACGCCTGACA              GCGC ACAAAAAAA GCGC              ACTTTTTGACTGGCA  40 28
SH08_RS13320 2679136 .. 2679152 +  -7.9  -4.12857   CTGATCCAAAAAGAA              CCCGTCG GCA TGGCGGG              TTATTTGTCCTGGTT  76 37
SH08_RS13325 2679670 .. 2679680 +  -2.4  -3.00298   AGCAATAACATGCTT                 GCCG GTG CGAC                 TGTGTACTTCAAGAA  42 275
SH08_RS13355 NONE
SH08_RS13360 2683212 .. 2683228 +  -2.1  -3.07233   TACGCTAGGCTTTTT              CGGCCTG GAG CATGCCA              TGTTGCGCATTATCG  43 33
SH08_RS13365 2684294 .. 2684315 +  -7.3  -3.45366   GTACCTGGGCGATAA           CGCCGTGGAA TAA TTCCG-GGCG           TTGATTAATTGCAAC  61 429
SH08_RS13380 2687325 .. 2687337 +  -4.7  -4.73613   TTGATCATCTGCCCA                ACGCG CCA CGCGA                TTTTGTTGATAATCA  75 365
SH08_RS13395 2689193 .. 2689213 + -15.5   -4.4267   AAAACGCTACAAAAA            TGCCCGATC CTC GATCGGGCA            TTTTGACTTTTACAG 100 51
SH08_RS13420 2694683 .. 2694695 +  -6.2  -4.08651   ATGAGATTAATTTAT                CGCC ATCGC GGCG                TTATTTCATTCGGAT  69 79
SH08_RS13425 2696307 .. 2696325 + -10.3  -5.68438   TATCATCAGGCGAAG             GCCTCTC CTCGC GAGAGGC             TTTTTTATTTGATGG 100 133
        znuC 2700505 .. 2700544 +  -3.6  -3.33815   CGAATTGTTTTGCGT  CGGGGAAATGATCGCTCA TGAT TGAATTATTATTTCCCGG   TTGGTTAGCCGGGAT  49 5
        znuB 2701315 .. 2701367 +  -8.4  -3.03443   CCAGCTAATCTATCG CTGAACACATTTGTCGGATGCGGCG CGAG CGCCTTATCCGACCTACG-GTTCGG TATCTCTGGTAGTCC  65 33
SH08_RS13465 2704097 .. 2704126 +  -7.1  -5.02074   TAGCGGGCAGTTTCA       GCAAGGTGCGG ACCATATG CTGCACCTGGC        TTTTTTCGGCACTGC  86 161
SH08_RS13490 NONE
SH08_RS13495 2709345 .. 2709355 +  -2.4  -3.04894   CCTATCATAGACAGG                 TGCC ATC GGCC                 ATTTTAAAGGGAGTT  42 49
SH08_RS13500 NONE
SH08_RS13505 NONE
SH08_RS13510 2711658 .. 2711675 + -14.1   -3.0976   GTTTGCATAACCTCA             GCGCCCG TTTC CGGGCGC              TATTCACGTCTTACG 100 162
SH08_RS13535 2718925 .. 2718950 +  -9.8  -5.46657   TTTCGTGAGAGTGAA         GCCTGATCAGG GTTAG CC-GATCAGGC         TTTTTTATTGCCATC 100 47
SH08_RS13540 2719929 .. 2719939 +  -6.8  -3.32844   ACCAGCGTCATCAAT                 CCTG AAG CAGG                 TTGTCGCGTAGAAAG  59 386
SH08_RS13620 2736564 .. 2736582 +  -8.8  -3.06483   TATCGCGCTGCTGGC             TTTCCGCG CTT CGCGGAAC             TATCTGCTTTAGGTC  68 76
SH08_RS13650 2743806 .. 2743833 + -11.3  -5.52986   GAAGGTTTTGAGAAA        CCGCTGCCTCA TCTGTT TGAAGCAGCGG         TTTTTTTAATGGGAT 100 71
SH08_RS13660 2744471 .. 2744483 +  -9.1  -3.64488   GATGGCAAGAAATAG                CGCCT GCC AGGCG                TCTTTTCCGGCCATT  75 148
SH08_RS13665 2744890 .. 2744905 +  -6.8  -2.71364   TAAATATTTTAATCA              GCGAGG GGAT CTTCGC               TGATTAAAGAAATAG  56 38
SH08_RS13670 2745553 .. 2745575 + -16.3  -3.61178   AAAACTAATGCTCTC           CGGCGGCAG GTTTA CTGCCGCCG           TTTCAAATCAGTGAC 100 33
SH08_RS13680 2747247 .. 2747276 +  -7.9  -3.67517   GCCTCAAATTCCTTA       TTGGGTGCCAG AATTAACG CTGACACCCAA        TTTGGCCTCTTAATG  70 48
SH08_RS13720 NONE
SH08_RS13725 2752382 .. 2752408 + -12.3  -4.70659   GTCAGTAATATAAAA         CCGGCTGATAG CGTGC CTTTCAGCCGG         TTTTTGCATCTGGCA 100 33
        fliD NONE
        fliS NONE
SH08_RS13780 NONE
SH08_RS13785 2763978 .. 2764003 + -11.2  -3.90291   AGAGGTGATTTAAAT         TCATCCCCGGC GGCAA GCCGGGGA-GA         TTTCATTACGGCAGT  88 28
SH08_RS13795 NONE
SH08_RS13800 2766050 .. 2766078 + -11.7  -2.83748   TCAGAAGTAATCCCT        CATTCCCGCTGTG ACC CACAGCGGGAACA        TCGTTACCTTTGTAT  81 31
SH08_RS13805 NONE
SH08_RS13810 2767416 .. 2767450 +  -3.5  -4.55295   AATTGCCATGAGCCA     GACGCAGCACATT CTTGCATTC GACGTGCTGCGCC     TTTATTTATCACCAG  65 30
SH08_RS13825 2769158 .. 2769172 +  -4.3  -4.88067   TAACGCCACGCCGGG               TTCAC CGAGA GTGAA               TTTTTCTGCCTGCGT  79 71
        fliF NONE
        fliG NONE
        fliH NONE
        fliI NONE
        fliJ NONE
SH08_RS13860 2775821 .. 2775831 +  -3.2  -2.79831   GCGTGTAACAGGCAA                 CAGC GGC GTTG                 ATATTTTCGCCTAAC  43 1
        fliL NONE
        fliM NONE
        fliN 2777819 .. 2777829 +  -2.4  -3.22298   TCTGAGCGAATGCGC                 CGCC TGA GCCG                 TTAGTGATGAATAAC  43 11
SH08_RS13880 2778184 .. 2778205 +  -4.3  -3.17798   AAAAATTTGCTTAAG           CGTAGCGGG AGAT CCTGATGCG            TCGTTTATTGTCTGT  49 8
        fliP NONE
        fliQ NONE
        fliR 2779986 .. 2780007 +  -2.4   -2.7556   TTTGCTGGCTGATAT           TATTAGTG AATTGC CATTAATA            TAATTCCGTAACGTT  41 1
        rcsA 2780920 .. 2780965 +  -9.7  -2.61126   TTTTGTCAACATGCG CTAACACATTCTGACTGGTGG TTTC CCACCAGTCAGGCTGAATAAG ATTACTCTGCTTTCT  71 22
SH08_RS13910 2781773 .. 2781803 +    -4  -4.12188   TCAGCGGGATCGCTC       CCGAAAAAATCATC TTT GATAATTTGTGCGG       TTTTGAGAATCATCC  61 253
SH08_RS13915 2783012 .. 2783026 +  -3.5  -3.62096   CGCCTGATGACCAAA               GCGGT CATTA ATCGC               TTTAAAATGGTCAAG  53 379
SH08_RS13935 2787282 .. 2787305 +  -3.2  -4.07568   ACGCAACGCCACCGC          CTGTTTGA TTTTTGGC TCAAGCAG           TTTTGCCACCGCGGC  58 516
SH08_RS13965 2791619 .. 2791648 + -13.7   -5.4756   TAAAACTGAACACTA       GCCTGAGTTCG TCCCTCAT CGAACTCAGGC        TTTTTTATTGGCATT 100 69
SH08_RS13975 2793054 .. 2793086 + -10.6    -5.055   AAGCGCATAATCAAT     CGCGGCCGCGTTAGT ACTC AC-GACGTGGCTGCG      TTTTTTCACGGTTAA 100 61
SH08_RS13990 2795719 .. 2795730 +  -5.8  -2.73875   CATAAATATGTAAAA                GCAG ATCT CTGC                 TACTGTTAGGGAGGA  53 43
SH08_RS13995 NONE
SH08_RS14000 2797610 .. 2797624 +  -4.2  -2.84527   GATAAGTAGAACTGA               GAAAGC CAT GCTCTC               GTTTCCTAAGAGTTG  46 185
SH08_RS14005 2798448 .. 2798480 +   -13  -3.14602   TGAACGCAAGCTAGC     TACAGACACGCTCAT CACT ATGA-CGTGTCTGTA      TATTAATAAGCTAAC  95 116
SH08_RS14010 NONE
SH08_RS14015 2799480 .. 2799503 +    -6  -3.94773   TTATGGACTTTGTCC          CGCGGCT-TTA ATC TGACGGCCGCG          TTCCTTTTTTGACTC  66 10
SH08_RS14025 2800759 .. 2800770 +  -4.4  -3.29727   TGATACAGACTCGTT                TTCG GCGA CGAA                 TGTTCATTAATTAAC  51 4
SH08_RS14030 2801046 .. 2801072 + -15.9  -4.34402   TTTTAACATCTTAAG         CGCCCTCGACC TTTAT GGTTGAGGGCG         TTTTGCTATGAACGC 100 115
SH08_RS14035 2808369 .. 2808390 +  -8.7  -5.16572   TTATAATTTCTTAAA           GAGTGTTCC ATTC GGGGCACTC            TTTTTTACATTCCCT 100 48
SH08_RS14045 2811294 .. 2811325 +  -7.2  -2.70854   TCAACGCGCTTGATA      GCCTGGCGAAGATC ATCC GATCTTCGCCTTAC       ACTTTTGTTTCACAT  58 28
SH08_RS14050 2812903 .. 2812935 +  -9.9  -3.34013   TAAGTAAGACACCTG      GCAAATAGCCTGCAA TAA TCGTGGGCTGTTTGC      TTCCTTGGGCGGATA  76 81
SH08_RS14055 2813914 .. 2813948 + -13.9  -2.90382   ATCTCTAATTATCTT     TTAAAGAAATCTGTC TTTAC GGCAGATTTCTTTAA     TCTCATATAATTCTT 100 33
SH08_RS14070 2816270 .. 2816288 +  -5.9  -4.86133   CCAAATTCCTGAAAA             GCCCGCT TTTAT AGCGGGA             TTTTTGCTATATCTG  78 38
SH08_RS14085 2818678 .. 2818695 + -11.3  -5.05505   GCCAAATTCAAAAAA             GCCTGCT TTCT AGCAGGC              TTTTTGCTTTCTAAT 100 37
SH08_RS14135 NONE
SH08_RS14140 2827809 .. 2827836 + -17.8  -5.45652   TGTAACCCTTTACCT        GCCGGTATCCAC GTTT GTGGGTACCGGC         TTTTTTATTCACCCT 100 292
SH08_RS14145 2830994 .. 2831051 +    -7  -3.01791   TGACCTTCTGACAGA ACC-AT-CGCCTCTCTGTGGTCCCGGTCA TCA TGACCGGGACC-CGGACCGGCGCAACGGA TCTTCAACGCCACAT  58 30
SH08_RS14150 NONE
SH08_RS14155 NONE
SH08_RS14160 2833377 .. 2833391 +  -4.3  -3.30124   TGAACTGAGTGGGAA               TTCTG ATGAG CAGAA               TTATCGCCACTACCG  51 33
SH08_RS14165 2833836 .. 2833857 + -10.1  -2.55811   ATAGCCTTCTGCTAC           GGCCTGGTG TTTT CACCACGCC            ACTTTTCCATTTTTA  70 50
SH08_RS14170 NONE
SH08_RS14175 NONE
SH08_RS14180 2834622 .. 2834644 +  -9.9  -4.61873   CTTCATTTCTCCTGA          CGCCAGCCTG AATA CAG-CTGGCG           TTTTCATTTATAAAC 100 56
SH08_RS14185 2835324 .. 2835346 + -16.4  -3.05384   AGAATCAATGAGCAA           TGAGGGTTGC CGG GCAACCCTCA           TTGAATAAAACGGGA 100 87
        sbcB 2840637 .. 2840647 +  -6.8  -2.63991   GTCCTTCTTCTGCCG                 CCCA CTG TGGG                 ATTGCTTCAGTTGCC  52 148
        hisG NONE
        hisD NONE
SH08_RS14260 2849746 .. 2849758 +  -3.3  -3.76224   GTCATTGACGCCTTA                CGTGC GGA GCAAG                TTTGATGAGTCAGAA  53 8
SH08_RS14265 NONE
        hisH NONE
SH08_RS14275 NONE
SH08_RS14280 NONE
SH08_RS14285 2853570 .. 2853593 + -12.4  -5.27335   ATCCGGCAAAAAAAC          GGGCAAGGTG TCAC CACCCTGCCC           TTTTTCTTTAAAACC 100 75
SH08_RS14470 2896004 .. 2896018 +  -7.1  -3.30124   ACGAACGCCTGATGC               GACGC TTTAC GCGTC               TTATCAGGCCTACAG  64 251
SH08_RS14490 2902902 .. 2902915 +  -8.1   -3.4252   CCCATCGCCTGATGC               GACGC TAAC GCGTC                TTATCATGCCTACAA  68 51
SH08_RS14505 2905327 .. 2905367 +  -3.2   -4.9218   TTCGTTAATTGAAAA ATGGCTCAGCAGC-GGC TTAAATCT GCCTGCGCCTGAGCCAG  TTTTTCTGCTGCCTG  71 33
SH08_RS14515 NONE
SH08_RS14530 2911552 .. 2911562 +  -6.8  -3.01712   AAAAAGGAGCACGCT                 CCTG ATG CAGG                 TGTTACCCCCGAGCA  58 21
SH08_RS14535 NONE
SH08_RS14540 NONE
SH08_RS14545 NONE
SH08_RS14550 NONE
SH08_RS14555 2921431 .. 2921448 +  -5.5  -4.18197   ACTTTAATCGGTAAA             CAGCACC TTTA GATGCTG              TTTTCGATACACAAT  65 165
SH08_RS14560 2921840 .. 2921850 +  -4.6  -3.53012   GGGCGTGGGTTGTTG                 GCGT CCG GCGC                 TTTACCAGAGCCCCC  55 51
SH08_RS14565 2923459 .. 2923484 +  -9.8  -4.62085   GGAACCACCTCCTTA         GCCTGTGTAA TCTCCC TTACACGGGC          TTATTTTTTACGCGT 100 162
SH08_RS14585 2925952 .. 2925963 +  -5.8  -3.30124   CGTAATGCCGGATGC                GGTG TAAA CACC                 TTATCCGGCATACAG  57 73
SH08_RS14595 NONE
SH08_RS14600 2928097 .. 2928122 + -12.6  -2.72511   CTGTTTTGCACAATA         C-CGGGCCAGC ATCAC GCTGGCCCGCG         GTTTCAGGGAATGAG  88 431
SH08_RS14645 NONE
SH08_RS14650 NONE
SH08_RS14655 2938387 .. 2938431 + -15.8  -3.79993   GCTGTACTCAATAGG CCGTTGCTGTTGGTCAAGCG CCACT TGCTTGATCACCAGCACCGG TATTTTGCTATCTAA 100 62
SH08_RS14685 2943113 .. 2943131 +  -7.4  -4.08919   CTCTCTGCTCGCTAA             GGATGCTT TTA GGGCATCC             TTTCATTTACACTTT  73 108
SH08_RS14690 2944051 .. 2944067 +  -5.1  -3.28791   TTTATTGTTGCTTTG              TTACCTG TGG CTGGTAA              TTGTGAAACGGGAAT  54 489
SH08_RS14715 2948896 .. 2948911 +  -3.2  -2.65388   CGGGCGAAGAAAACA              GATGAC GGGT GTCAAC               ATTATACGTTAACTG  42 41
        metG 2952634 .. 2952653 + -10.7  -5.01553   ATAATCCCCCTTCAA            GGCGCTG CATCGA CAGCGCC             TTTTCTTTATAAATT 100 37
SH08_RS14735 2954064 .. 2954098 +  -3.5  -3.61398   GAAAGCCATTGCTGC    GTTCCCACA-TGCAGC AATG GCGGCACTGACGGAAC     TTCTTGGGCAAAAAG  53 502
SH08_RS14740 NONE
SH08_RS14745 2960208 .. 2960229 + -11.6  -3.29043   TCCATTAAAACACAG           CGGGCAGT GATGCA ACTGCCCG            TTATCAACACGACTT  86 33
SH08_RS14750 2960737 .. 2960779 +   -16  -2.90725   TTAGGCCTGAAAATA GTAAATAAAAGAACCTGC CTCACCA GCAGGTTTTTTTATTTAC TGTGATCTGCTTTCC 100 184
SH08_RS14755 NONE
SH08_RS14760 NONE
SH08_RS14765 2965382 .. 2965393 +    -3  -3.07816   GGCTTGCGGAGAATC                TTCA GTCA TGAA                 TTCACTACGTCCGGA  46 15
SH08_RS14770 2967468 .. 2967484 + -10.9  -3.46081   TATCCTATATAGCCC              CTGGTGA GAG TCACCAG              TTCCTTGATTAAATA  83 260
SH08_RS14775 2967980 .. 2968010 +   -17  -5.16472   AAGTGAAATAATCGG       TTGGCGGTCATGCT CTA AACATGACCGCCAA       TTTTTTAGCCTTTTT 100 30
SH08_RS14795 NONE
SH08_RS14800 2972407 .. 2972417 +  -6.8  -2.70932   CCGTAAAGGATCAAG                 GCGA TAA TCGC                 TGGTTGCAGACCAAA  53 379
SH08_RS14830 2980255 .. 2980271 + -10.8   -5.8096   GCCGTCTGCCCCGCC              GCCGCC ATTTG GGCGGC              TTTTTGTTTTTTATA 100 91
SH08_RS14845 2982731 .. 2982744 +  -8.1  -4.25104   TACCATGCCTGATAC               GACGC TTGT GCGTC                TTTTCATGCCGACCA  79 88
SH08_RS14860 2985621 .. 2985649 +  -7.3  -3.04398   CACATCCATGTGGGC        TGCCCCGGCCTTC AGG GAACGCCTCGGCA        ATTTTGACGCCACCA  61 292
SH08_RS14870 NONE
SH08_RS14875 2988013 .. 2988023 +  -6.8  -4.87037   GGCTAAAATTTGCGA                 TGCG TCG CGCA                 TTTTTGATGTATGTT  82 35
SH08_RS14880 2989085 .. 2989101 + -10.9  -4.15044   TGGTGTCGAAATTCC              CGGCAAA CAG TTTGCCG              TTTCTTGCGCAAAAC  93 93
SH08_RS14885 NONE
SH08_RS14890 2990180 .. 2990208 +    -6  -3.58242   TACTTCACCTGATAA        GCTGCGGATA TCACATTCC TAACCGCAGC        TATTTGTGAATCTTT  61 77
SH08_RS14895 NONE
SH08_RS14900 2992893 .. 2992924 +   -13  -2.82482   TTGAGCTTATTGTAG      GCCGGATAAAACGC GCCA GCGTTGCATCCGGC       ATTTGGCTCCTGTTG  91 129
SH08_RS14930 2999268 .. 2999299 +  -5.8  -3.21099   AGCGATACGCCCAGT      CC-AGCTGCCATTGC AGG GCGATGGCAGGAAGG      TTAATGGTCACCCCA  55 366
SH08_RS14945 NONE
SH08_RS14950 3001819 .. 3001834 + -11.8  -2.56271   CTGAAGTGAAAGTCC              GCCCGG TTCG CCGGGC               ATCTTCTCATCAGAA  81 32
SH08_RS14970 NONE
SH08_RS14975 NONE
SH08_RS14980 3009871 .. 3009885 +  -7.1  -3.30124   AATGTTGCCGGATGC               GACGC TTAAC GCGTC               TTATCCGGCCTACAA  64 42
SH08_RS14995 3013098 .. 3013117 +  -4.3  -3.28857   ATTATTTTCAATAGC            GCGATTGC CGGAT GCAA-CGC            TTAATACGTTTTATC  51 43
SH08_RS15030 3022462 .. 3022481 +    -5  -3.97443   TGCCCGAAAGGCCCG            TCGCGA GTACTTTG TCGCGA             TATTTTTGACATTTT  61 377
SH08_RS15040 3023109 .. 3023128 +   -10  -5.46129   GCCGCATGCAGAAAA            GGGATAGC TCAG GCTGTCCC             TTTTTTAATTTATTA 100 46
SH08_RS15045 3024788 .. 3024826 +  -8.1  -4.03183   TTTAACGATTTCTGC   GGTTAAAGCGGATGAAG CTCAC CTTCGTCCGCTCTCCCC   TTCTCTTTTCTGCCT  74 36
SH08_RS15050 NONE
SH08_RS15055 3026982 .. 3026993 +  -2.2  -5.61596   AGGTAATTAGTCTCG                TGTC GCTT GGCA                 TTTTTTTATAACGAT  82 374
         spr 3027661 .. 3027678 + -11.3  -5.85244   ACGAGTTAACTGAAA             GCACTGC TTAG GCAGTGC              TTTTTTGTTTTCATT 100 75
SH08_RS15065 NONE
SH08_RS15070 NONE
SH08_RS15075 NONE
SH08_RS15080 NONE
SH08_RS15085 3035035 .. 3035046 +  -2.2  -3.53012   CATGTTGCAGCAAAC                TCGT CCTG GCGA                 TTTACAAACAGGCAC  47 105
SH08_RS15105 3039536 .. 3039561 +  -7.5  -2.70525   AAAGCAGATCACTTA         CCTGTTGCTGG GTCG CCTGTAGCAGG          ATTAATTTAAGAGAG  58 103
SH08_RS15110 3039883 .. 3039912 + -15.9  -2.90219   TTGCTGAATAAGTTG       TAAAAAACCCCGC TCCG GCGGGGTTTTTTG        TATCTGCAGATTATG 100 41
SH08_RS15120 NONE
SH08_RS15125 3043190 .. 3043226 + -12.5  -3.18634   AGACGAGAAGCGTTT    TATCGCTAACTGATTAA TTA TAAATCAGTTAGCGAAA    TATCTTACTTGCAAT  93 13
SH08_RS15130 3043371 .. 3043387 +    -8  -5.76633   AATCCCAAGAAAAAA              CCAACC CTTAC GGTTGG              TTTTTTTATATCTGC 100 43
SH08_RS15150 3048394 .. 3048418 + -11.4  -4.29436   CTTTGTCAACAGTCT          AGCCCGATGG CATCA CCATCGGGCC          TCTTTTTATTTACTC 100 206
SH08_RS15230 NONE
SH08_RS15235 3061546 .. 3061559 +  -8.1  -3.30124   CCGGTTGCCTGATGC               GACGC TGGC GCGTC                TTATCAGGCCTACAC  66 112
SH08_RS15280 NONE
SH08_RS15285 3073903 .. 3073936 + -14.7  -3.55622   GACTAATCACCTGTA     GGCCAGATAAGACGC GTTA GTGTCTTATCTGGCA      TTTGCACCGATTGCC 100 35
SH08_RS15295 NONE
SH08_RS15300 3080326 .. 3080372 + -10.2  -2.90904   TGTATAACACCAAAA CTTGCTATGCAGAAATTTGCAC AGT GCGCAATTTTCTGCATAGCCGC TCATTCTCCTTATAA  76 34
SH08_RS15305 NONE
SH08_RS15310 NONE
SH08_RS15315 NONE
SH08_RS15320 3084370 .. 3084395 + -14.1  -4.64676   ATTAATCAATAAAAA         CACCCGATAGC GAAA GTTATCGGGTG          TTTTCTTGAACATCG 100 36
SH08_RS15360 3097399 .. 3097443 + -12.3  -3.53811   ATGCGACGCTTGCCG CGTCTTATCAGGCCTAC AAATGCTCCCC GTAGGCCGGATAAGGCG TTTACGCCGCATCCG 100 69
SH08_RS15370 3101866 .. 3101878 +  -3.3  -2.64616   TGTTCTAAGCAGCTT                CCCGT ACT ACAGG                TAGTCTGCATGAAAC  42 41
SH08_RS15375 3104337 .. 3104354 +  -7.7  -3.88291   AGCGTGAACGCCTTA             TCCG-GCC TAC GGCTCGGA             TTTGTAGGCCTGATA  72 146
SH08_RS15380 NONE
SH08_RS15385 3105837 .. 3105887 + -13.5  -3.07113   AATCGAGATGTGAAT TGGTTGTAGTGCCAGATACAACGC TTAT GCGTCTTATCTGGC-CTACAACGA TTACATGGCGTAGTA 100 28
SH08_RS15395 3107387 .. 3107418 +    -3  -3.73534   TCAGCTGTACCAGAT      TGAGCTCCATGCCCA TTT TGGGT-TCCAGCTCA      TTCTTAATACGCTTC  53 453
        glpA NONE
SH08_RS15415 NONE
        glpC 3113790 .. 3113817 + -14.2  -4.65895   TAAACTCCTTTCTGA        TGCCCGGTAAGC ATGT GGTTACCGGGCA         TTTTTGCGTACACGA 100 38
SH08_RS15425 3114862 .. 3114886 +    -3  -3.13522   CTGATATTCCGAACT          GTCATTAA AAGGAGAGA TTAATGAC          TATTGCTGAACGGCT  46 18
SH08_RS15430 3115076 .. 3115100 +  -2.7  -3.84825   CCACTAATTAACACA          GGCCCACAG CCGATCC CCATGGGCC          TTTGATATCAATAAC  52 34
SH08_RS15465 3122531 .. 3122552 +  -3.7  -4.79352   ACGACAACCGGGTGC           TGCTGTGCCA GTC TGGC-CAGTG           TTTTATTGTCGATAC  73 512
SH08_RS15475 NONE
SH08_RS15480 NONE
SH08_RS15485 NONE
SH08_RS15490 3127970 .. 3127982 +  -4.1  -2.57985   AATTGCGGGTAGTCG                CTGAT GAA ATCGG                TACGTTACCTTATCG  45 22
        arnT NONE
SH08_RS15500 NONE
SH08_RS15505 3130486 .. 3130511 +  -6.1  -2.58667   AATCCCCCACTTTCA         CGGCGAAGTCA CTCT TCACTTCGGCG          ATCATTTTTATCGCG  50 168
SH08_RS15555 3139610 .. 3139628 +   -11  -3.28712   GCTTATTATTAAAAA             CAGGGCGA AAC TTGCCCTG             TTATCGCAACCCGCG  81 45
SH08_RS15560 3141002 .. 3141044 + -13.7  -3.73224   TAACATCATTGTTAA TTA-ATTCGACCAGTCAGCA AATA TGCTGACTGGTCGAACATAG TTTGCTAAACAGTCA 100 38
SH08_RS15570 NONE
SH08_RS15575 NONE
SH08_RS15585 NONE
SH08_RS15590 3147070 .. 3147088 + -11.7    -2.981   TCTTTTTCAGAAAAA             CCGCCGA GCATG TCGGCGG             CTTTCTGACTTACAA  83 66
SH08_RS15665 3165853 .. 3165879 +  -9.4  -3.28791   CTGTAATCTTAATTT         CACTGCCGGA GATTGCA TCCGGCAGCG         TTATCCCGCCACAAT  74 35
SH08_RS15670 3166534 .. 3166581 + -12.8  -3.28712   CGCTGTAAGCAGCCG GAGTCTG-CGTCGCATCAGGC AATAAGC GCCGGATGCGACATCAGGCTC TTGTCAAAACGGAAA 100 33
SH08_RS15700 3171741 .. 3171768 + -16.4  -4.36914   CTGACTGCCTGATTT        CA-CACCGCCAGC TCA GCTGGCGGTGCTG        TTTTGTAACCCGCCA 100 29
SH08_RS15705 3173997 .. 3174019 + -10.7  -5.64304   CTGCGGATATCTGAA           CCGGAAATA ATCAC TATTTCCGG           TTTTTTATTCTCTTA 100 66
SH08_RS15710 3175676 .. 3175693 + -12.7  -5.32944   CACTAAAAATGTTAA             GAGCCGC AATT GCGGCTC              TTTTTTCATTCTGCC 100 35
SH08_RS15730 NONE
        folX NONE
SH08_RS15740 3179936 .. 3179949 +  -3.7  -3.98214   AAATGCACGAAAACG               CTGGG CATC CCCTG                TTTGTAATACGTAAT  58 295
         flk 3196128 .. 3196140 +  -4.7  -2.78384   GCCAGCGGCCCGGAG                ACGCC GAG GGCGA                TATCCTGAAACGCGG  46 143
        mnmC 3200863 .. 3200874 +  -7.2  -3.30243   GTGTTTGCCGGATGC                GGCG TGAA CGCC                 TTATCCGACCTACGT  64 53
SH08_RS15875 3206256 .. 3206277 + -17.3  -2.72799   CCAGGTACGGGTAAT           GGCAGGGGC GAAT GCCCCTGCC            TGGTGTATCTAAGGG 100 59
SH08_RS15935 3219733 .. 3219753 + -15.5  -3.64822   GTTCGCCTGGATAAA            GTCACCTGC ATA GCAGGTGAC            TTTAACTCCCCCACT 100 47
SH08_RS15940 3221282 .. 3221301 +  -8.6  -5.85425   GATAACAACAAAAAA            GGTGAGTT TTGC GACTCACC             TTTTTTATTTGTTTC 100 172
SH08_RS15950 3223338 .. 3223356 +  -4.5  -2.82516   CGGCAGCGTACTTAC             CCCGC ACTCCATTA GCGGG             TATACTCATGCCGCA  49 65
SH08_RS15955 NONE
SH08_RS15960 3224792 .. 3224825 +    -9  -3.01857   ACAACTATCGAATAG     CACAAAGTCTTGCA ATCCAG TGCAAAGCTTTGTG      TGTATAAGTTTTGTC  68 50
SH08_RS15965 NONE
SH08_RS15970 NONE
SH08_RS15975 3227722 .. 3227736 +  -4.2  -2.56271   ACAACAAACCCCCTC               CAGAAC CAA GTGCTG               ATATTATCATCAACA  45 220
SH08_RS15980 3228526 .. 3228553 +  -8.6  -3.96148   AGCTTGCGTGTAATC        CTCTTTC-ATCTC CAA GGGATAGAAAGAG        TTTGTAGTCGCGGAA  74 381
SH08_RS16015 3231042 .. 3231055 +  -2.5   -4.0942   CATTAATATCATTCT               TAATT AACT AATTA                TTTATCTCATCACTG  57 35
SH08_RS16020 3231938 .. 3231953 + -10.4  -3.86346   TTTCATTACTGCAAA              TGCCCC TGCG GGGGCA               TTTATGGAAACGTAA  86 41
SH08_RS16025 NONE
SH08_RS16030 NONE
SH08_RS16035 3233335 .. 3233347 +  -4.8  -3.20878   AGCGTATTTTTATTA                CCTG ATTTG CAGG                TTCGATTCCCTATTC  51 116
SH08_RS16040 3233737 .. 3233750 +  -2.3  -4.81852   GCCGAATAAGGCACA               CCAGG AACT CGTGG                TTTTATTCATTATGA  66 186
SH08_RS16050 NONE
SH08_RS16055 3237591 .. 3237601 +  -5.4  -3.53224   TATCTGGCAAAAGGC                 CGTT AAT AACG                 TTTCAACGCAGCATC  57 20
SH08_RS16070 3241472 .. 3241494 +  -4.2  -2.71712   TATTTTTCTTCTCTG           TTGTGGTC TTTGGTC GACCATAA           GTTTCGCAGACGAAG  45 62
SH08_RS16075 3245040 .. 3245066 + -10.9  -3.34517   AATGACTAAATAGCG         GCTCCCACAAT GTTCA AATGTGGGAGC         TATTTACCAGCACAT  81 32
SH08_RS16105 NONE
SH08_RS16120 3253665 .. 3253692 + -11.4   -5.4756   TCCCTCCTCAAATCG        GCCATAATAACC TCAT GGTTTTTATGGC         TTTTTTCTTAAGGTT 100 59
SH08_RS16130 NONE
SH08_RS16135 NONE
SH08_RS16140 3259057 .. 3259072 +  -3.3  -3.53444   TTTCAGGGCTAACGT              CAGAA GGTTAA TTCTG               TTTCCAGCAGCGTCA  49 29
SH08_RS16175 3267997 .. 3268014 +  -5.5  -2.77791   GTTATGGCGATGATA             CGGGG CTTTACCT CCCCG              TAATATTGCGTTAAC  50 70
SH08_RS16180 NONE
SH08_RS16185 3268731 .. 3268741 +  -6.8  -2.79796   GACTCATAACCAGAA                 TCCG TGT CGGA                 TCTAATCCCATCAGA  53 281
SH08_RS16195 3271340 .. 3271361 +  -4.4  -3.52073   AAGCCGGGGATAATT           CCCATAAG CGCTAA CTTAAGGG            TTGTGGTATTACGCC  52 55
SH08_RS16200 3272533 .. 3272559 +    -8  -3.14683   GGAGAATAACAAAAA         TGGTCATCTGGA GCT TACAGGTGGCCA         TTCGTGGGACAGTAT  63 49
SH08_RS16220 NONE
SH08_RS16225 3276280 .. 3276302 +   -12  -4.55887   AGCATAAATAAAAAA           CGGCAGGATA TTA TCTCCTGCCG           TTTATCTTTTTACAC 100 34
SH08_RS16235 NONE
SH08_RS16240 NONE
SH08_RS16245 NONE
SH08_RS16250 3278397 .. 3278427 + -17.1  -2.90212   GCACGACCCACCAAT       GTAAAAAAGCGCC CTAAA GGCGCTTTTTTAC       TATCTGCGATACTCA 100 28
SH08_RS16275 3282963 .. 3282985 + -17.8  -2.56571   TAACTTCTGATTGAT           TACTGCCGGG GCT CCCGGCAGTA           TGAATTCACTCTATA 100 31
SH08_RS16285 3285021 .. 3285053 +  -2.8  -4.25104   CTTAAAGCGGACGCT     TC-AGGGGCTGGAC CAGTTGC GTC-AGCCCCTCGG     TTTTAATCAGCAGCG  59 36
SH08_RS16305 3289330 .. 3289349 + -12.8   -3.7347   CGTTTGTGTGAAACA            GGGGTGGC TTAT GCCGCCCC             TTATTCCATCTTGCA 100 65
SH08_RS16310 3290475 .. 3290490 +    -9  -5.26316   AAAATGCGTAAAAAA              GCACCT TTTT AGGTGC               TTTTTTGTGGCCTGC 100 54
SH08_RS16315 3291076 .. 3291099 +  -4.5  -4.11692   GTTAAACTGATGGCG          GAACTCGAG TAATTT CCCGGGTTC           TTTTAAAAATCAGTC  63 14
SH08_RS16320 NONE
SH08_RS16325 3293429 .. 3293446 + -12.7  -5.71983   TGCCGCAGTGAAAAA             TGGCGCC CATC GGCGCCA              TTTTTTTATGCTTCC 100 45
SH08_RS16335 3294768 .. 3294787 +  -2.1   -3.5394   GATAAAACGGTGCCT            GCGGA AGGAAATTAA TCCGC             TTTGGGAAGGCATTT  47 11
SH08_RS16340 3295586 .. 3295644 +  -8.9  -2.78868   ACAACTGTTAAAAAA GTGCGCTTTGTTTATGCCGGATGCGGCG TAAA CGCCTTATCCGGCCTACA-AAATCGTGC TAATTCAATATATTG  67 62
SH08_RS16380 NONE
        murP NONE
SH08_RS16390 3306661 .. 3306688 + -14.2    -3.767   TGGTCAACAATCTGA        GGCCAGTCAGTA ATGT TACTGCCTGGCC         TTTAATCAATGAATC 100 214
SH08_RS16415 NONE
SH08_RS16420 3311677 .. 3311711 +  -7.1  -4.02456   TTCTCGCAAAACGTC    GCCAGCGCCTGTTGGAC AAA GCCCCACAG-CGC-GGC    TTTATGCTGCTCTTT  70 512
SH08_RS16515 NONE
SH08_RS16520 3331928 .. 3331979 + -15.8  -3.30243   TGATGGTGATTGCCG GATGCTGATTGCCGGATGCGACGC TGAC GCGTCTTATCCGGCCTACAGCGTC TTATCCGGCCTACAT 100 38
SH08_RS16540 NONE
SH08_RS16545 3340996 .. 3341017 +  -8.7  -4.70879   ATAAGCAATAAAAAA           GGCGACATG CCAA TGTGTCGCC            TTTTTCAACTTTCCG 100 37
SH08_RS16550 3341385 .. 3341398 +  -2.5  -3.60925   TTCTTAATGTTTACG               TTAAA AATG TTTAA                TATTATTTAATAGTT  50 160
SH08_RS16555 NONE
SH08_RS16560 3342999 .. 3343014 +  -5.4  -2.82623   CGTATCATGGAACAG              CTCGTC GCCT GATGAG               TGGTTCTGCAAGAGG  50 14
SH08_RS16565 3343268 .. 3343320 + -12.6  -2.52623   CGTAGGCCGGATAAG GCGTTAACGCCGCATCCGGCAATG GTGAA CGATGCCTGATGCGACGCTCACGC GTCTTATCAGGCCAG  86 55
SH08_RS16590 3348281 .. 3348299 +   -11  -3.41878   GCCCAGTTCCTGCCA             GTCGCTGT CAG ACAGCGGC             TTATAAGTTACGGCC  83 110
        gcvR NONE
         bcp 3351280 .. 3351293 +  -5.3  -2.68088   CATACCTCACTTCTC               GTGAT CAAG ATCAC                ATTCTCGCTTTCCCC  49 81
SH08_RS16615 NONE
SH08_RS16620 NONE
        hycD 3355052 .. 3355063 +  -3.6  -2.87211   GCTTGCATGGGTCTT                CTGG TTAA CCGG                 TCTGTAAGGAGCACT  45 7
SH08_RS16630 NONE
        hyfE NONE
SH08_RS16640 NONE
SH08_RS16645 NONE
SH08_RS16650 NONE
SH08_RS16655 NONE
SH08_RS16660 3362144 .. 3362159 +  -6.2  -3.15427   GCCAGAAAAATTGCG              TGAGAA GGAT TTCTCA               TTAATAAGGACTGTT  57 23
SH08_RS16665 3364166 .. 3364180 +  -3.5  -3.31766   TGCAGCGGCTGGGGA               TCTCG GTTCG CGAGG               TGTTGTAATCTGCTT  49 3
SH08_RS16670 3365061 .. 3365094 + -11.7  -2.96444   TCAGGAACCCTGAAA     AATCAGCCCGGCGAA ACAG TTCGTCGGGCTGAAG      ATTATTCTTGCGCGA  83 28
SH08_RS16680 NONE
SH08_RS16685 3368631 .. 3368664 +  -3.7  -4.11484   CCCAGATTCAACTGC     CGCGGTGGACGATCG CCGG TGATCAACAACCGTG      TTTTGCCCGATTCCA  60 443
SH08_RS16705 NONE
        purN 3373166 .. 3373185 + -10.7  -4.74504   CCCCCGTAATTAAAG            CGCCAGC TCTGCC GCTGGCG             TTTTTCAATTCACCT 100 43
SH08_RS16715 NONE
SH08_RS16720 3376938 .. 3376966 + -18.2   -3.6279   CGCCGCTTAATACTT        TGCGGGCCGACG AGAAA TGTCGGCCCGCA        TTATTCAGGCACTTT 100 31
SH08_RS16735 3379811 .. 3379840 +  -2.1  -3.63045   TCGCTGTCGGATGCT       TTTGCTGTTTGGG ATTA TCAAAGCGGCAGA        TATTCTTTCATCTTA  49 79
SH08_RS16740 NONE
SH08_RS16745 3381181 .. 3381210 + -12.3  -3.41693   TAATTCTTGAAGATA       AAAAACCCTCTGT AGTA ACAGAGGGTTTTG        TTCATTCATAGTGCA 100 65
        xseA 3385919 .. 3385955 +  -5.8  -4.09685   TCGATATCAAGCCAT   GCCCGTGCTGACAGAAG TAAT CTACTG-CACCACAGGC    TTTTAACACCTGCAA  68 66
        sseA 3403624 .. 3403667 + -18.4  -2.90194   GAAATAAGTATTTTA CAGGCAATAAAAAACCGCCG AATT TGGCGGTTTTTTATTGCTAG TCTGGTTCGCGGCCT 100 34
SH08_RS16880 3414506 .. 3414517 +  -5.8  -3.18264   TGACGAGTTAAGCGA                CGCT CTGA AGCG                 TTAATGACTCAGGCG  55 10
SH08_RS16885 NONE
SH08_RS16890 3417247 .. 3417263 +  -7.9  -3.17212   TTGCACCACTATCAA              CCACGGC AAC GCCGTAG              TTGCTCCCATAATGC  61 281
SH08_RS16905 NONE
SH08_RS16910 NONE
SH08_RS16915 NONE
SH08_RS16920 NONE
SH08_RS16925 NONE
SH08_RS16930 3424051 .. 3424082 + -16.6    -3.794   CGGCGTTAGGAAAGA      TGCCGGATGCGGCG TGAA CGCCTTATCCGGCA       TTTAATAAATTACAG 100 32
SH08_RS16965 3434352 .. 3434369 + -11.3  -3.23216   GCGATAACGTAGAAA             GGCTTCC CGAA GGAAGCC              TTGATGATCATAAAC  84 45
SH08_RS16975 3437337 .. 3437361 +  -7.1  -2.74192   ACATCCGGCAACCCT          TGACGCGGT TTAAATT GCCGCGTCG          TCCTCTTCACCGGTA  59 61
SH08_RS17005 3447647 .. 3447662 +  -3.2  -4.10552   AATCCGTCGAGGATT              GCGC TTTTTTCT GCGC               TTTAATTTCCTGGCG  58 39
SH08_RS17020 NONE
SH08_RS17025 3450344 .. 3450373 + -12.9  -3.11999   TTTATAGTTATTAAA       GGTGCGTCCGACTG GTT CAC-CGGACGCACC       TTAAGTACGTTTCCT  95 170
SH08_RS17040 3450833 .. 3450869 + -10.9  -4.56597   AATTAAAGTTAAAAA    GTAAAACCCCCGTTC CTTACCA GTTCGGGGGTTTTAC    TTTTTAAAGAGAACG 100 71
SH08_RS17105 3462430 .. 3462450 +  -3.9  -4.08216   AATGCCAGCAGCACC            CGATGCG GCAGTCG CGCTTCG            TTTTCCGCCACATCC  60 137
SH08_RS17115 NONE
SH08_RS17120 3464686 .. 3464711 +  -3.2  -4.82901   CTTTGTCGACAAGTT         AAATGCCGGG TTTAAT CCCGACATTA          TTTTTATCCAGCCAC  68 47
SH08_RS17130 3466296 .. 3466319 + -16.8  -3.22884   TATTAACGAAAAAAA          GCGGAAGAGG TCGC CCTCTTCCGC           TTAGTAACTTGCTAC 100 35
SH08_RS17140 3467734 .. 3467759 + -14.7   -3.0169   AATTTGCGGGGAAAT         GCCGGATGGCA GAGT TGCCACCCGGC          TGATTTATCAGGCTT 100 40
SH08_RS17155 3469437 .. 3469457 + -14.7  -4.50976   TCTCTTTAATCTTAC            CGGGGCGCA TCT TGTGCCCCG            TTTTCTCCTCTGCGA 100 32
SH08_RS17160 NONE
SH08_RS17165 NONE
        pssA 3474365 .. 3474381 +  -9.4  -5.04249   ATCCTGTAATCACAA              CCCCGT CCTGT ACGGGG              TTTGTTTTTTGGAGG 100 32
SH08_RS17175 3474942 .. 3474956 +  -4.3  -3.32022   GGAACATCTCAGCCT               TCAGT ATTCC ACTGA               TTGATGTATAAAAAC  51 240
SH08_RS17225 3487180 .. 3487199 + -10.7   -5.9218   ACCTGAAACACAAAA            CGGCAGC CCTTGA GCTGCCG             TTTTTTTATTCTGTC 100 46
SH08_RS17230 NONE
SH08_RS17235 3487797 .. 3487812 + -11.8   -5.4505   TGAGTGTATCGCCAA              CGCGCC TTCG GGCGCG               TTTTTTGTTGACAGC 100 51
        pheA 3489189 .. 3489216 + -18.6  -2.67428   CAACCTGATGAAAAG        GTGCCGGATGAT GTGA ATCATCCGGCAC         TGGATTATTACTGGC 100 33
SH08_RS17255 NONE
SH08_RS17260 NONE
SH08_RS17265 NONE
SH08_RS17270 3494407 .. 3494428 +  -7.1  -3.62224   CAAACAGATAAAAAA           GGGCCAGCC AATT GGCCAGCCC            TTCTTAACAGGATGT  68 49
SH08_RS17300 3499087 .. 3499104 +  -2.7  -3.64192   CGTTGATCATTATTC             TGATCAT CATG GTGGTCA              TTTCAGCCTATTTTT  50 83
SH08_RS17305 3500343 .. 3500368 + -14.7   -2.6563   GCGGAGTAACGAAAA         CGGCCCGGCAT TCGC ATGCAGGGCCG          TGAATTATTACGAAA 100 32
        ppnK 3502025 .. 3502044 +  -2.2  -2.56601   TATAAAACCAGTTTA            TACTGT ACACAATA ACAGTA             ATGGTTTTTCATACA  39 65
SH08_RS17325 NONE
SH08_RS17330 3504242 .. 3504281 + -12.4  -3.70444   AAAGTTGCTCTCAAA  GACGTTAAAAAAGGTGCTC AAT GAGCACCTTTTTTC-TGTC  TGTTATTTATTCGCT 100 45
        smpB 3505847 .. 3505858 +  -4.4  -3.60792   GGCGCTCATAAATCT                GGTA TACT TACC                 TTTACACATTGGGGC  54 218
SH08_RS17350 3507683 .. 3507708 + -16.3  -3.86897   GTCGGATAAAATATT         TATCAGCCCAG CTCT CTGGGCTGATA          TTTCTAAAAGATCGC 100 32
SH08_RS17360 3509184 .. 3509214 +  -3.3  -2.66695   GGAGTGTAAACATCC      TGCTATTTCCGCCA TTAA TAGCGGAA-TAGCC       ATATTTGCTAAACAA  42 77
SH08_RS17365 3510740 .. 3510756 +  -3.7   -2.7035   CAGTTCGGATAAAAG              CTTGTCA TCT TGATAGG              TAATATATAGGTACA  44 95
SH08_RS17370 3511887 .. 3511908 + -10.9  -3.67296   CGACTTTGCTGCGTA           TACCACGCT TTAC AGCGTGGTG            TTTAACTACATCCTC  81 463
SH08_RS17390 NONE
SH08_RS17395 3517933 .. 3517956 + -16.8  -5.56372   GAACAATCCGATGAA          CGGCAGAACC TCGC GGTTCTGCCG           TTTTTGTTTTACTTT 100 327
SH08_RS17400 3518879 .. 3518902 +   -16  -4.88895   CCTATTATTCTCCGA          GCCCTGTCGC AAGT GCGGCAGGGC           TTTCTTTATTTGTTT 100 55
SH08_RS17405 3519876 .. 3519899 +  -4.6  -2.61582   TTACATCTGGCTTTT          GCAGAAATAA AAAA TAGTTTCTGC           GTTGTCCATACCCTG  48 139
SH08_RS17410 NONE
SH08_RS17415 NONE
SH08_RS17420 NONE
SH08_RS17425 3521917 .. 3521943 +  -8.6   -5.1471   TTCCCTACCATAACA         ACCCTGATTGCC TCC GGCGGTCGGGGG         TTTCTTTTTTCTCCT 100 51
SH08_RS17440 3525305 .. 3525320 + -10.4  -4.92363   TCTTGTAACGCATTT              GGCTCC AATT GGAGCC               TTTTTATGACTATTT 100 33
SH08_RS17445 3526628 .. 3526641 +  -5.2  -2.88366   AGCACCCTGAATCCA               GCGC CATTAT GCGC                ATTATTGATTAAGGA  50 0
SH08_RS17450 3527124 .. 3527139 +  -4.7   -3.6707   CAAATCTATTCGTTC              GCAGA ACACGG TCTGC               TTTGAGGTATTACAT  57 5
SH08_RS17455 NONE
SH08_RS17460 3528392 .. 3528407 + -10.4  -4.90869   CCTGGTAACATGAAA              GCCCAC AGAT GTGGGC               TTTTTCGTTGATGGT 100 359
SH08_RS17500 3537699 .. 3537720 +  -2.9  -4.45664   ATAGAAGGTGGTATC           CCTGGCTAT TAGC AAGGTCAGG            TTTTGATTCCATTCA  61 14
SH08_RS17505 NONE
SH08_RS17510 3538936 .. 3538963 + -15.7  -2.62386   TATAATTTAATGTTA        TATCTGCCCCG ATAAAA CGGGGCAGATA         ATATGTTTAGTTTAC 100 36
SH08_RS17515 NONE
SH08_RS17520 NONE
        gabD NONE
SH08_RS17530 3544322 .. 3544361 + -10.1  -3.53811   GGAGGCGACGCTGCG  CGTCTTGTCCGGCCT ACGGGGATCC AGGTCGGATAAGGCG   TTTACGCCGCATCCG  78 56
SH08_RS17535 NONE
SH08_RS17540 3546640 .. 3546662 + -10.6  -4.63184   AATACGCAACACTTG           CCCCGGATAA ATT TTATCCGGGC           TTTTTAGCATCGGTT 100 53
SH08_RS17555 3547790 .. 3547800 +  -3.2  -3.54935   TATTGTCCGTAAGGA                 GTCA CTA TGGC                 TTTGACAACCATTTC  49 29
SH08_RS17560 3548487 .. 3548504 +  -6.2  -5.00616   GGTGAATTTATATTT             CGCCGG ACGCGG CTGGCG              TTTTTTACCAGCGCG  83 192
SH08_RS17570 3549900 .. 3549922 + -19.2  -3.42283   CCTGACTCTTCTTTT           CGCGACTGGC ATC GCCAGTCGCG           TCTTTAACTGGCTTC 100 36
SH08_RS17580 3550783 .. 3550803 + -12.6  -4.89063   AATACGCGTCTTTGA            CCCCGAAG CCTGT CTTCGGGG            TTTCTTTTTGCCTGG 100 57
SH08_RS17585 NONE
        nrdI NONE
SH08_RS17595 NONE
SH08_RS17600 3554852 .. 3554876 +  -7.2  -5.15381   CTCTGTTGCATTATT          CGCCTGAA ACCACAATA TTCAGGCG          TTTTTTCGCTATCTT  90 140
SH08_RS17605 NONE
SH08_RS17610 3557360 .. 3557378 + -12.4  -3.31144   AAGTAACTCTGCACT             TGCCCGGT GAC GCCGGGCA             TTATCACCCTGCCAA  95 35
        proX 3558411 .. 3558440 +  -9.9   -2.6914   AGTAATTTTTATTCG       GGCGGATAAGGCG TTTT TGCCGCATCCGCC        GTTCTGTGCACAATG  71 36
SH08_RS17620 NONE
SH08_RS17625 NONE
SH08_RS17630 NONE
SH08_RS17635 3561624 .. 3561647 + -12.5  -4.56597   AAAGAAAAAATGACT          GGCCAGCAT CGCAAC ATGCTGGCC           TTTTTGGCAAGCAGG 100 73
SH08_RS17640 NONE
        emrB 3564441 .. 3564460 + -12.2   -5.1848   ACTAAGTACAACTAA            GCCAGTTC ATTT GAACTGGC             TTTTTTCAATTAATT 100 36
SH08_RS17710 3572514 .. 3572529 +  -3.2   -3.6692   TTCTGAAAAGACAGT              TGGCAA AGGT TCGCCA               TATTTTCGCGTCGCC  51 165
SH08_RS17730 3574438 .. 3574470 +  -4.4  -4.40572   TATGTTCTGTTGAAG     CAATT-ATACTGTAT GCTC ATACAGTATCAAGTG      TTTTGTAGAAATTGT  63 165
        srlA NONE
        srlE NONE
SH08_RS17755 NONE
SH08_RS17760 3579106 .. 3579123 +  -5.5  -3.27475   GACAGTCGATCAATG             TCACCGG CGGT CAGGTGA              TGTTCTGATCAACAG  55 0
SH08_RS17765 NONE
        srlR NONE
SH08_RS17775 3581405 .. 3581442 +  -4.9  -3.55444   TTAATCCTTCAATCC  CAGACGTTTCGCCAGCC GATGCA GGTTGGCG-A-CGTCGG   TTTCCAGCATCCGCG  55 37
SH08_RS17785 NONE
SH08_RS17790 3585701 .. 3585746 +   -12  -3.53811   GATGCGACGCTGGCG CGTCTTATCCGACCTACG GGGACGCATG TGTAGGCCGGATAAGGCG TTTACGCCGCATCCG  91 66
SH08_RS17810 NONE
SH08_RS17815 3593514 .. 3593524 +  -6.8  -4.14243   GCAGTTCACGGATAG                 CGAC GAT GTCG                 TTTTCCGGTGCGCTA  70 510
SH08_RS17860 3601160 .. 3601189 +  -5.8  -3.61398   TGAATTTCGTCGCCG       TGTCGACG-TGTC ATTTC GACATCATCGACA       TTATTCACCGCAGGG  61 512
        hypA NONE
SH08_RS17875 NONE
SH08_RS17880 NONE
SH08_RS17885 NONE
SH08_RS17890 3604919 .. 3604935 + -13.7  -3.72576   AGTCAATGACCTTTT              GCACCGC TTT GCGGTGC              TTTCCTGGAAGAACA 100 65
SH08_RS17895 3607040 .. 3607065 + -14.8  -2.77701   GATTTAACTGCAAAT         TGCCGGACAG ATCTGC CTGTCCGGCA          TACTATTCATGAGGT 100 34
SH08_RS17905 3610276 .. 3610302 + -11.7  -3.01924   CTGGTGTAATAACAA         TTCCCGATAGT CTTTT GCTATCGGGAA         TATTAACGACAACTG  83 32
SH08_RS17910 3611247 .. 3611273 +  -4.2  -3.58536   ACAGACCAAAACTCG         CTGGCGGCTGGC ACT GGCAATCGCCCG         TTTCACCGTGACTTT  53 241
SH08_RS17920 NONE
SH08_RS17925 3614164 .. 3614175 +  -3.6  -5.40072   AAATCTGGCAACTTC                GGTG ATGA CGCC                 TTTTTTTCACGAGCC  80 73
SH08_RS17930 NONE
SH08_RS17935 3615665 .. 3615682 + -11.3  -2.56095   CGTACCCATACATCC             CCCCATC TACG GATGGGG              TAGGTTAACTATAAC  79 63
SH08_RS17940 3617093 .. 3617112 + -12.2  -4.77165   TGACCTTAATAAAAA            GGTCCGAT GGGC ATCGGACC             TTTTATTGTGCACAG 100 38
SH08_RS18005 3628251 .. 3628286 +   -14  -2.65264   GTTTGAAAATGGGAG    CTGGGAGTTCTACCGC AGAG GCGGGGGAACTCCAAG     TGATATCCATCATCG  95 44
SH08_RS18065 NONE
SH08_RS18070 NONE
SH08_RS18075 NONE
SH08_RS18080 3645461 .. 3645475 +  -7.1  -3.30124   TTCAGCGCCTGATGC               GACGC TTGAC GCGTC               TTATCAGGCCTACAA  64 101
SH08_RS18110 NONE
SH08_RS18115 3654038 .. 3654061 +  -6.6  -2.52795   AACATACCTGAATGG          TTATCCCCGC TGAC GCGGGGAACA           TAAGTTCGACAACTT  55 75
SH08_RS18125 NONE
SH08_RS18130 3657213 .. 3657232 + -13.6  -4.66609   CTCAACCATAAAAAA            TGCCAGCC CGGA GGCTGGCA             TTTTTAAATCAGATA 100 41
SH08_RS18170 3668618 .. 3668649 + -10.9  -4.67943   GCGTTTAGCATCAGT      CTCAAACCGGCTC CAGATA GAGCCGGTTTTGG       TTTTCTGTCTTAACG 100 216
        queF 3676822 .. 3676848 +    -3   -2.5805   ATAAATTTTTTCTCA         ATTTTGCGTG CTGGATT CACGCAGAAG         GTTGTGAAAGGTCAT  42 37
SH08_RS18220 3678297 .. 3678318 + -10.1  -4.72556   CGTAATCTCCGCTCC           CCCGGTGAC GTTT GTTGCCGGG            TTTTCTCGTTTTTGG 100 36
SH08_RS18225 3680141 .. 3680160 + -12.8  -3.27786   CAGCTAAGTCCTTTC            GCGCCGCT TTCG GGCGGCGC             TTCCTCCGTTTTAAC 100 34
SH08_RS18230 3681570 .. 3681588 + -12.4  -3.08774   TAATCGCTCTCCAAA             GGCCTCGT TTT GCGAGGCC             TCTTCCCGATTTCTC  93 38
SH08_RS18235 3682430 .. 3682461 + -14.4  -3.32844   GGTACGGTAACGGCG      AGCCGGATACGCCG CAAA CGTCGTATCCGGCA       TTATCACATCAGCGC 100 31
SH08_RS18250 NONE
        fucI 3688038 .. 3688065 + -12.9  -3.01791   ACAAGCAAGAGTGGT        TAGCCGGATAA GCAATG TTATCCGGCTA         TATTGCAGGAGCGAT  95 90
SH08_RS18260 NONE
SH08_RS18265 3689938 .. 3689956 + -13.1  -2.60212   AATCTCATACCGGTA             CGCCCGC ATGAC GCGGGCG             GTTATCGAATGATGG  91 39
SH08_RS18270 3690728 .. 3690749 +  -8.6  -3.21993   ACGGAAAGGGTAGCA           GGCCGGAG ACGACG CCCCGGCC            TTGCCTGTTATCGCT  67 40
SH08_RS18295 NONE
SH08_RS18300 3695608 .. 3695645 + -14.9  -3.92542   GGTTTAAGCACAGAA   CCGGGTCGGATAAGACG TTCG CGTCTCATCCGACCTGA    TTGTTTAACCCTGAC 100 34
SH08_RS18315 NONE
SH08_RS18320 NONE
SH08_RS18325 3698307 .. 3698320 +  -8.1  -6.02919   CAACCAATTATTGAA               CACCC TAAC GGGTG                TTTTTTTGTTTCTGG 100 35
SH08_RS18335 3701198 .. 3701242 + -12.9  -3.37761   GGTAAGCGATGAAAA TCGTCGGATGCGACATGCG TAACACT CGTACGTCGCATCCGGCAA TTACGTTTATTCCCG 100 36
SH08_RS18400 NONE
SH08_RS18405 3720233 .. 3720248 +  -2.5   -5.0917   TACACTGCGAATATT              CGGCA CATAAT TGCTG               TTTGTTTTTTAATCA  73 61
SH08_RS18410 NONE
SH08_RS18415 3721769 .. 3721786 +  -2.6  -4.13945   GTACGCTCTCCTGCG             GGAGGG CGTACT CACTCC              TTTTACCCTCACAGT  57 47
SH08_RS18420 3722107 .. 3722133 +  -7.3  -2.81421   ATTGAACGTTAACAA         ATAAGGTCAGC ATCCG GCTGGCCTTAA         GATTTTTCTCTTTCC  59 29
         tas 3723253 .. 3723280 + -12.8  -3.13403   ATCCGGCACCATAAG        ATTAACGCCGGT TAAA ACCGGCGTTAAA         TATTAATGACGGCGC  95 27
SH08_RS18440 3728283 .. 3728317 +  -9.3  -3.28791   CCAGTAATTCTTCGA    TGGTCTGGCGACGG CGAATCAA CCG-CGCCTGACCA     TTATCAAACAGAACT  69 64
SH08_RS18450 3730972 .. 3730985 +  -2.3  -3.94811   GTGCAACGTGACTCA               ATGGC ATCC GCCAC                TTTATGCATCGTATT  54 427
SH08_RS18480 3737700 .. 3737737 + -16.7   -4.8083   AGCTAATATCAGTTG   TGG-ATGGTTCAAAATTG CTA CAATTTTGAACCATTCCA   TTTTTCATAATATTC 100 35
SH08_RS18485 3738817 .. 3738842 + -11.3  -4.42386   ATCATACTCTGTTTA         TACGGGCATTT ATTG AAATGTCCGTA          TTTTATAAATAGGCC 100 60
SH08_RS18490 NONE
SH08_RS18495 3740889 .. 3740903 +  -2.8  -4.62069   AGGAATTTTTTTAAC               GGAATC CTT GGTTTC               TTTTTCGAGTCCGAA  68 514
SH08_RS18505 3741715 .. 3741730 +  -2.6  -3.96327   ATATTAGTAAAACAA              CTAATG ATGT TATTAG               TTTGTAGTGAACAGT  54 83
SH08_RS18510 3742397 .. 3742434 + -11.5  -2.75614   ATCATTTGGTTAAAT   TTGCTGGTTATAGTG CAGTTAAC CACTATAACCAGCAC    CTCTTATGTTTTCTT  81 49
SH08_RS18515 NONE
SH08_RS18520 3744494 .. 3744519 +  -9.1   -3.6187   CCAAATAAATCATAA         CGAGATACTTT TATA ATAGTATCTCG          TTCCTTTCATTCAAT  75 49
SH08_RS18525 3745054 .. 3745067 +  -2.3   -6.0427   AGGCTTCAGCAAAAT               GAGCC TAAA GCCTC                TTTTTTTTATATAGT  90 50
SH08_RS18585 NONE
SH08_RS18590 NONE
SH08_RS18595 3754590 .. 3754611 + -15.9  -3.08471   CGAAGTAAAAGGATA           TCCGGCCTG AATT CAGGCCGGA            TTCACTGAGGTTATG 100 33
SH08_RS18605 3758073 .. 3758094 + -13.7  -3.24232   GTGAAATAACCCCTC           GGGCCGATC AGCT GGTCGGCCC            TCTATTTCCAGAGGC 100 32
SH08_RS18610 NONE
SH08_RS18615 3760607 .. 3760626 +   -15  -4.71482   ACTCTTCACTTATTC            CCCTCCGG TTCG CCGGAGGG             TTTTTGGAGTTTGCT 100 43
SH08_RS18620 NONE
SH08_RS18625 3763193 .. 3763220 + -10.5  -4.54727   TTTGTCATCAGTCTC        AGGCCGGGTGG GTAATA CCATCCGGCCA         TTTTCATTTAAGCCA 100 211
SH08_RS18640 3766590 .. 3766600 +  -3.2  -2.88544   CCTGGCAAGAGTGGT                 GCGA TTG TTGC                 TCTATCCCCCTAAAC  43 263
SH08_RS18645 3769757 .. 3769767 +  -2.4    -2.867   TCATTATCTGCTGGG                 CCGC GTG GAGG                 TGTAATCATGTTGAT  41 10
SH08_RS18650 3771114 .. 3771136 + -17.8  -3.05384   CATAAATGACAGATG           CCCTCTTCCC GCA GGGAAGAGGG           TTAAATAAGGAAAGA 100 36
SH08_RS18655 NONE
SH08_RS18660 3774810 .. 3774825 + -11.8  -3.73323   ATATAAATAATAAAT              GGCCGC TTCG GCGGCC               TGTTTCTCTGTTTGA  93 35
SH08_RS18665 NONE
SH08_RS18670 NONE
SH08_RS18675 3779108 .. 3779131 + -13.9  -4.41348   GGCAATCTAATAGAT          TCTCCGCGC CTTTCA GCGCGGAGA           TTTCTTTCAGAGAGG 100 31
SH08_RS18690 NONE
SH08_RS18695 NONE
SH08_RS18700 3783578 .. 3783594 +  -7.2  -3.35798   TTTACCTGTCGGCAT              CCGCTC AAAAC GGGCGG              TTGTCGATAAACGCT  64 47
SH08_RS18705 3784233 .. 3784250 +  -8.3  -3.31263   GCTTAAATAAAAAAA             CCCCGAC ATTT GCCGGGG              TTGTGAGCATAACGT  69 31
SH08_RS18735 3790997 .. 3791026 +  -8.5  -3.77188   TACGCCTGATCTCAC       TGACGGCTTAGCG CATA TGCTTTGCCGTCA        TCTTTATCTTTGCGT  75 32
        ygfZ 3793167 .. 3793184 +  -9.1  -3.50572   CCGCCGAGCACGAAG             CCGTGCC AGAT GGCATGG              TTGTATGGAATGCGT  71 285
SH08_RS18765 3795924 .. 3795934 +  -8.2  -2.67244   CGCGTCCAGGCTCGC                 CGCC GCT GGCG                 TGCATTTCGGTATAA  59 234
SH08_RS18810 3806764 .. 3806780 +  -5.1  -2.92618   GTTACAGCCTGCGGC              GGCATCT CGG AGATTCC              CTTCTTATCTGGCAC  52 234
SH08_RS18815 3807748 .. 3807770 + -13.4  -3.66908   GAAGGGATAAAAAAA           CGGGCAAGTC AGT GACCTGCCCG           TTGATTTTCAGAGAA 100 370
SH08_RS18835 3811273 .. 3811295 +  -8.5  -3.45434   TAATCCATCAAATAA           TGCCTGATA GCACA TATCAGGCG           TTGTCCTCACTTCTT  71 38
SH08_RS18840 NONE
SH08_RS18845 NONE
SH08_RS18850 NONE
SH08_RS18855 3817073 .. 3817092 +  -5.6  -4.11216   CACCGTCAGAAAATG            TCCGCGCT CCAC GGCGCTGA             TTTTGGCCATAAAAC  65 205
SH08_RS18930 3833419 .. 3833450 +  -8.6  -3.16323   CGGGTGCCGAACGTA      GGTCGGATAAGGCG TTCA CGCCGCATCCGACA       TTAATGGCACGTTTT  67 160
SH08_RS18950 3837018 .. 3837028 +  -8.2  -4.36914   GCTTTTTATTTAAGC                 CGCG CGC CGCG                 TTTTATACCCCACAA  82 28
SH08_RS18960 3838496 .. 3838514 + -11.7  -5.48213   TCACCTGCGTTCAAA             GGCCAGC CTCGC GCTGGCC             TTTTTCTTTTGGATA 100 48
SH08_RS18965 3840316 .. 3840328 +  -4.7  -3.07787   GCTTCCTCCCATCGC                GGAGG AAG CCACC                TCTTGCAGTCATCTT  51 50
SH08_RS18970 NONE
SH08_RS18975 3841715 .. 3841737 +  -4.7  -4.71061   TACCCCACGCGTACA           ACCGCGTGG GGAGA CGACGCGGA           TTTTTAACTATGCGT  71 73
SH08_RS18980 NONE
SH08_RS18985 3843478 .. 3843518 +  -2.3  -5.00616   TCGTTGAGACTCTGA  GTGACAGCGCCCTTCTTTC CAC GCATACTGGGCGCTGTTGC  TTTTTTGAACCAGGA  68 62
SH08_RS18990 NONE
SH08_RS18995 3844631 .. 3844662 + -11.6  -3.17475   TGGCAGCGGCTATAG      GTCTGATAAGACGC GTTA GCGTCGCATCAGAC       ATTTATTGCCTTTGT  84 127
SH08_RS19005 NONE
SH08_RS19010 3846982 .. 3847011 +  -2.9  -3.21416   ATGCTGCTGCCAGGG       CTGTGGATGGCGTT ATG AATGCCGTA-ACAG       TTAATGATGACGGTC  44 8
SH08_RS19015 NONE
SH08_RS19020 NONE
SH08_RS19025 3849078 .. 3849109 + -11.6  -2.60392   TGGCAGCGGTTGTAG      GTCTGATAAGACGC GCAA GCGTCGCATCAGAC       GTTGATTGCCGGATG  80 87
SH08_RS19060 3854662 .. 3854673 +  -3.6  -3.55761   TACAGCAGTTACGCA                CTGG CGCG CCGG                 TTTAGCGCGTGAGTC  51 9
SH08_RS19065 3854987 .. 3855010 +  -8.9  -3.05384   TAAAAAATAAAAACA          GT-GCCGGAG CACGC CTCCGGCAAC          TTGCATAAAAACAAA  68 31
        mltC 3856269 .. 3856284 +  -2.5  -4.57569   GAATCCCATCATCTC              GCACG GTCAAA TGTGC               TTTTTCAAACACTCA  61 169
SH08_RS19075 3857590 .. 3857629 + -15.2  -3.81146   AGCCACTAATTACGC  AAAGAAAAACGGGTCGCC AGAA GGTGACCCGTTTTTTTTA   TTCTTACTTCAACAC 100 32
SH08_RS19085 3860851 .. 3860864 +  -3.7  -3.65351   TGCCGCTTTCCGCCG               CCTGG ACCG CCTGG                TTTGCCTGACAATGC  53 3
SH08_RS19090 3861069 .. 3861085 + -10.8  -5.10154   ACTAATTCTTAAGAA              CCCGCC CACAA GGCGGG              TTTTTGCTTTTGGAT 100 40
SH08_RS19125 3870166 .. 3870208 +   -13  -3.54424   TAAGACAGAATAATG TAAATGAAGCCGGATGAT ATTAACG ATCATCCGGCTTTATTGA TTTACGAGACTAACA 100 133
SH08_RS19160 3879713 .. 3879732 +  -2.9  -3.33151   CGCCCCAATGCGTTC            CA-GCATG TTATT CATGCCTG            TATTGGTTTCGAGGA  47 89
SH08_RS19170 3881843 .. 3881854 +  -2.2   -2.7186   AATGGCGAAGAAACG                GTCT AAAT AGGC                 TGATTCAAGGCATTT  40 61
SH08_RS19190 3885450 .. 3885472 +  -9.1  -4.08692   AGTCAAAAATGGAAA           TGCCCGATC GCCAG GACCGGGCA           TTTTCAGGAAGGTTA  83 39
SH08_RS19205 3890290 .. 3890303 +  -8.1  -3.30124   CACAATGCCTGATGC               GACGC TGCC GCGTC                TTATCAGGCCTACGA  66 109
SH08_RS19265 3899664 .. 3899678 +  -2.8   -3.1811   ACGTCAGATGGATAA               TGACGT ACC ACATCA               GTTTGTTATCCGGGA  45 139
SH08_RS19275 3901165 .. 3901191 + -14.5  -2.86539   TTTAGGTTAAAAAAA         TGCCCGGTTGT GAAAA GCAACCGGGCA         TCATTGTGAATTCAC 100 31
SH08_RS19295 3904063 .. 3904083 +  -3.3  -3.29459   TTGGACAATTTTGCA            GACATTTTA TTG TGAAAAGTC            TTAAATTGTTGCGTC  47 52
SH08_RS19300 3904846 .. 3904871 + -14.8   -3.5486   CCTGACGATTTTCCC         CGTTCCCGGT TGCTGT ACCGGGAACG          TATTTAATTCCCCTG 100 36
SH08_RS19315 3907192 .. 3907215 + -16.8  -3.25823   TTAAGTTCACAACAC          CTCACCGGAG CCTG CTCCGGTGAG           TTCATATAAAGGAGG 100 86
        dkgA 3908076 .. 3908104 + -10.9  -3.05775   TAACATGCAAATTCT        CCCGGTGGCGGTA ATG TTCCGCTACCGGA        CTTTTCAGAAATCAT  79 38
SH08_RS19325 NONE
SH08_RS19330 3909504 .. 3909535 +  -8.7   -5.0538   GCAGAATGATAAAAA      AATCCCCGGTAGC GTGTCA GTTGCCGGGGATA       TTTTTTAACGTCCAA 100 32
SH08_RS19380 NONE
SH08_RS19385 3922454 .. 3922485 + -14.6  -4.30576   CTGGTAACTTCTCTG      TCTATGAGAGCCGT TAAA ACGACTCTCATAGA       TTTTACTAATAGCAA 100 34
SH08_RS19395 NONE
SH08_RS19400 3924080 .. 3924104 + -14.3  -3.66578   TTAATCCTGCCTTGT          TTGCCCGGCCA TCC TGACCGGGCAA          TGTTCTTTCCTTTAA 100 37
        tolC NONE
SH08_RS19435 NONE
SH08_RS19440 NONE
SH08_RS19445 3932200 .. 3932227 + -14.2  -3.67558   GTTGAATAAGCCACG        ATACCGGATGGC ACTC GCCATCCGGTAA         TTGTTAGCCTATCTG 100 32
SH08_RS19455 3933950 .. 3933970 +  -9.8  -3.31322   AAAACAACATCAGAA            GTTGTCCA GCGCA TGGACAAC            TTCTGCCAGCTTCAC  76 40
SH08_RS19470 3935758 .. 3935796 +  -4.9  -4.24397   ACATTCGTCTTTAAT  GCACTGTAAATTATGA ATTAATCC TC-TAATTTATAGTGC   TTTCTATTACCTTAT  66 41
SH08_RS19475 3936583 .. 3936606 + -12.4  -2.72379   TTACGAGTAATCGCA          TTTGGCCGGG TTCG CCCGGCCACA           TCATTAACGGATTAA  88 31
SH08_RS19480 NONE
SH08_RS19485 NONE
SH08_RS19490 NONE
SH08_RS19495 NONE
SH08_RS19500 3942330 .. 3942345 + -11.8  -3.53164   ATACAAACACTAAAA              CGGGCC ATCA GGCCCG               TTATATCAGTGCTCT  91 47
SH08_RS19510 NONE
SH08_RS19515 3945156 .. 3945178 +  -8.4   -5.4251   CTCTTCCAGGAATAA           TCCCTGGC CCAAAAA GCCGGGGA           TTTTTTATATCTGCG 100 44
SH08_RS19520 NONE
SH08_RS19525 3946362 .. 3946379 +  -7.7  -3.23979   TCACCACGTTTACGC             GCTG-CCG CTA CGGCCAGC             TTCAGTTCCTCTTCG  61 522
SH08_RS19550 NONE
SH08_RS19555 3953808 .. 3953839 +   -13  -2.60392   CAACGACAGTTGTAG      GCCTGATAAGACGC GCAA GCGTCGCATCAGGC       GTTGATTGCCGGATG  91 92
SH08_RS19570 3956250 .. 3956264 +  -5.7  -2.63479   GACCGTTCCCCAACT               CCCAT ATTCC ATGGG               TCATATCGCGCTCTT  47 352
SH08_RS19580 3957970 .. 3957980 +  -2.4  -3.29144   AAAATCTGTCTCACA                 CCCG GAG CGCG                 TTATGAAAAAGATCC  45 9
SH08_RS19585 3958595 .. 3958614 +  -9.3  -4.57073   TCAAATAACCCTCCC            GGAGAGG CTCACC CCTCTCC             TTTTTCGCAGGCATA  95 33
SH08_RS19590 3960274 .. 3960299 +  -3.9    -5.243   GTACAAAATTCCGGA         CGC-GCGTAGAA CAC TTCGCCGCGGCG         TTTTTTCATCATTTC  84 201
        rpsU 3961655 .. 3961681 + -10.9  -4.40882   AGTTGTAGTTGTAAG        GCCGTGC-TTCC GAAA GGAATGCGCGGC         TTATTTTCGTTTATG 100 73
        dnaG 3963562 .. 3963574 +  -4.8  -3.28269   CGTAATTATCGTTGG                CGGT AAACA ACCG                TTGGATTTCAGCGTT  53 125
SH08_RS19610 3965554 .. 3965572 + -11.7  -5.24129   GGCCCTCTGCACAAA             CGCCACC TTTTC GGTGGCG             TTTTTTATCGCCCAC 100 81
SH08_RS19620 3966295 .. 3966316 + -14.5  -5.71295   ACCAGATATAGCAAA           GGCTGACGA GAAA TCGTCAGCC            TTTTTCTTTTTATAT 100 37
SH08_RS19630 3968181 .. 3968210 + -11.3  -3.57144   TTAATGCAGTACCGT       CACCGCGTCTTCC AGTC GGCTGGCGCGGTG        TTTCACCATCGCCGA  89 194
SH08_RS19640 3971489 .. 3971521 + -12.8  -4.82901   AGAAGCGTAATATCA      AATCGGATGGCGAT ACGAC GTCGCCATCCGATC      TTTTTATACGACGCG 100 31
SH08_RS19650 3973068 .. 3973106 + -12.6  -2.64766   CCGTTAAATCCCCTT  ACA-CACTGTCCGGCAA TCGTTT TTGCCGGACAGTGCTGC   CGTTTATTTTCGTGA  88 34
        ebgA NONE
        ebgC NONE
SH08_RS19665 3978304 .. 3978335 + -11.1  -3.05274   AAAAATGAGCAGGCA      TTTTCCCTCTTCCT GGATG AGGA-GAGGGAAAA      TAGTTTCTGCCTTTA  79 52
SH08_RS19670 NONE
SH08_RS19675 3981871 .. 3981882 +  -7.2  -3.30243   ACTGCTGGCGGATGC                GGCG TAAA CGCC                 TTATCCGCCCTACAT  64 47
SH08_RS19680 3984302 .. 3984336 + -10.6  -2.50816   GATTTAAATCGTTAT     TTGAAGCGCCGGATGC AAC GCATCCGGCACGTCGC     GTTAATCAATAAACA  73 34
SH08_RS19705 NONE
SH08_RS19710 3987832 .. 3987846 +  -2.8  -2.87564   AGCATGGCTGTCCGG               CGCA GAAATAA TGCG               TATCTGCGCACGTCG  42 15
SH08_RS19715 3989065 .. 3989084 + -10.8  -5.56673   CCGGGCAACCCGAAA            GGAATACG CAGA CGTATTCC             TTTTTTGTTGTAAGT 100 183
SH08_RS19720 3990308 .. 3990322 +  -5.7  -5.30189   CCAAACGGGGCGAGG               GGACT GACCG AGTCC               TTTTTTGATGTTGTC  86 178
SH08_RS19725 3991807 .. 3991831 + -14.3  -4.44974   TAATTAATTGTTTAA          CCCCTTTCGTC TAC GGCGGAAGGGG          TTTTCTCAACTTTAA 100 34
SH08_RS19745 3997164 .. 3997181 + -12.7   -4.7497   TAGTTTCCCTTCAAA             GCCGCCT TCTC AGGCGGC              TTTTTCATCACTGCG 100 57
SH08_RS19750 3998052 .. 3998071 + -10.7   -4.0942   GAAATTCCTGTCCGA            CAGGCGC TGCAAT GCGCCTG             TTTGTCTCGTCGGTA  93 39
SH08_RS19755 NONE
SH08_RS19760 3999496 .. 3999521 + -11.9   -2.6914   CTGTCTATGATTAAT         GAGGCGGTGGT TAAC ACTACCGCTTC          GTTGTCTGGACAATC  83 89
SH08_RS19765 NONE
SH08_RS19770 NONE
SH08_RS19775 NONE
SH08_RS19780 4000996 .. 4001014 + -12.4  -3.37071   GGTTAACTTCCCTCT             GGCCGGAG CCA TTCCGGCC             TTATCCCTCAAATTT  95 35
SH08_RS19785 4001592 .. 4001609 + -11.3  -4.87626   CTTAACGATAAAAAA             CGAGGAG GAAG CTCCTCG              TTTTTGCTATTGGAG 100 53
SH08_RS19790 4002626 .. 4002643 + -11.3   -2.8664   CTTCGGTTAAAAAAA             GGCACCT TACG AGGTGCC              TCTGATAATTAGCTA  81 31
SH08_RS19795 4003293 .. 4003315 + -10.6  -4.60977   AAAACAAATCTGCTC           GCCGGATG TCTGACT CATCCGGC           TTTTATCATTATGTT 100 39
SH08_RS19800 4003888 .. 4003905 + -12.7  -5.07486   ATTAATCTTAGAATT             GGGGCGA TATT TCGCCCC              TTTTTATTAACAATA 100 36
SH08_RS19810 NONE
SH08_RS19815 4005836 .. 4005847 +  -7.2  -3.30124   CAGGTTGCCGGATGC                GGCG AAAA CGCC                 TTATCCGGCCTACAA  64 44
SH08_RS19875 4019539 .. 4019553 +  -4.2  -3.59402   TTTTGATCGGCGTAG               GCCACA GAA TGTTGC               TTCGTTTACTGTAAC  54 157
SH08_RS19880 4020178 .. 4020192 +  -2.9  -5.23396   CTTTTTTTCACCCGA               TCATT TTAAT AATGA               TTTTTATTGATTATT  73 1
SH08_RS19885 4021771 .. 4021784 +  -9.5  -4.65895   CTCCAAAAGTAAAAA               CCCGC CGAA GCGGG                TTTTTACGTAAAACA 100 385
        garD 4028689 .. 4028706 +    -7  -5.38549   ACGTCCCTCGCAAAA             CATGGC CTTAGT GCCATG              TTTTTATTGTTTAAA  89 52
SH08_RS19920 NONE
SH08_RS19925 4029715 .. 4029733 +  -4.4   -3.1505   TTCGCAGTCCTTCCA             GGCTATCC GCA GGAATGCC             TTCATCAACAATGAT  49 130
SH08_RS19935 NONE
SH08_RS19940 NONE
SH08_RS19945 NONE
SH08_RS19950 4033453 .. 4033476 +  -3.2  -5.12987   TTTGCTCCTTTATTG          GGCCTTCAC TTCCCCC GT-AAGGCC          TTTCTTTTTCTTTCG  75 44
SH08_RS19955 NONE
        kbaY 4035844 .. 4035865 + -10.9  -2.56596   ATTTATCCCAATGTA           CTTCCCGAT TAAT ATCGGGGAG            TGCCTTAATGGAAAA  76 57
SH08_RS19965 NONE
SH08_RS19970 NONE
SH08_RS19975 4038086 .. 4038110 +   -10  -3.90856   TTTTGTAAATGGAAC          GAGGCACTGC GTCTG GTGGTGCCTC          TTTACTTAAGGAATT  86 33
SH08_RS19980 4038911 .. 4038954 +  -2.5  -4.22524   AAATAACATTTGACT GGGTTGAACATAACGCC GATAGCAAAA GGAGTTATGTTCAACAA TTTAATTTTAGATAT  57 102
SH08_RS19985 4039827 .. 4039856 + -19.5  -4.50241   ACCGTTAATACGTTA       GGGCGTTATCTGA CCTG TCAGATAACGCCC        TTTTCCTTCCTCTTT 100 33
SH08_RS19990 NONE
SH08_RS19995 NONE
SH08_RS20000 4044345 .. 4044361 +  -6.5  -5.00616   ACGCCGTGAATTTCT              GCGGC CAGCGCC GCCGC              TTTTTTCAGCGGCAG  83 129
SH08_RS20010 NONE
SH08_RS20015 NONE
SH08_RS20020 NONE
SH08_RS20025 4048817 .. 4048831 +  -7.1  -3.30124   TGTAATGCCTGATGC               GACGC TTGCC GCGTC               TTATCAGGCCTACAA  64 49
SH08_RS20040 4051563 .. 4051573 +  -8.2   -5.4833   CGGCCCACTCATCTG                 CGCG TGG CGCG                 TTTTTTCTTCCGTCA 100 287
SH08_RS20050 4052413 .. 4052424 +  -4.4  -2.87132   ACATAGCCAATGACC                TGAC CTTC GTCA                 TCTGTCGCCACCAGC  47 361
SH08_RS20065 NONE
SH08_RS20070 4055211 .. 4055231 +  -6.3  -3.18264   AACAACTTTAACTAC            TCTTTAATG CAG TATTAAAGA            TTAATCGGTAACAAA  57 60
SH08_RS20075 4056643 .. 4056653 +  -2.4  -4.07568   TGGCGGGGCAAAGGT                 CAGC AAT GCCG                 TTTTCAAGCGGCCCA  56 404
SH08_RS20085 4057763 .. 4057776 +  -6.7  -2.72344   TTTTACAGATTGTGT               TCGCT GTTC AGCGA                TGATTACGCATCACC  56 9
SH08_RS20140 4071801 .. 4071821 +  -8.9  -3.25356   GTAATTCGACATCAA            CCCTGCCCT TCA GGGGTGGGG            TTACCTTGCTTATCC  71 37
SH08_RS20180 4079978 .. 4080005 + -13.6  -3.25946   CACGCTCTGTTCGTT        GATAAAAGGCCGC ATA GCGGCCTTTT-TC        CTTTCTTTACAATAC 100 111
SH08_RS20190 4082374 .. 4082397 +  -8.2  -3.36327   CATCAGGCTGATTTG          GCGTTTATCA TCAG TGATTAACGC           TTGTAAATGAACTCA  69 194
SH08_RS20215 4086504 .. 4086522 +   -16   -2.7386   AATCCCCTCCCCTCA             TCCCGCGC AGC GCGCGGGA             TGGTTCCAGTAAGTT 100 39
SH08_RS20220 4087312 .. 4087327 +  -5.4  -3.68351   GGCACATGCATAAAG              CGGTTT TCAA AGACCG               TTTCGGTGATAAACC  58 341
SH08_RS20260 NONE
SH08_RS20265 NONE
SH08_RS20270 NONE
SH08_RS20275 NONE
SH08_RS20280 NONE
SH08_RS20285 NONE
SH08_RS20290 NONE
SH08_RS20295 4098298 .. 4098322 + -12.9  -2.95459   TAGCATGTGCATGGC          GGTCTGTTGTG CGG CACAACGGGCC          ATTTGTACGGTTAAT  95 54
SH08_RS20300 4098890 .. 4098904 +  -2.1  -3.28712   GTAGTTATTCGGTAA               TGTCT CTTTT AGACG               TTGTGAGGAGAAACA  45 37
SH08_RS20305 NONE
SH08_RS20310 4100035 .. 4100056 + -10.3  -2.75963   CTTTAATTCTGGTTT           TGATGAAGA TTAA TCTTCATCA            CTTTGACATACAACT  75 13
SH08_RS20315 4101050 .. 4101060 +  -5.4  -4.22748   GAAATTCTTCTCGGC                 TGAC TCA GTCA                 TTTCATTTCTTCATG  65 182
SH08_RS20325 NONE
SH08_RS20330 4103105 .. 4103136 +  -2.3  -4.40358   GTCTACTTGTGATAA      C-AATGCCGGACAG GAGTA CTATCAGGCATTCG      TTTTATACGATCGGT  58 29
SH08_RS20335 4104428 .. 4104454 + -12.4  -3.53444   ATTTCAGCGGTTTCG         AATTCTGCAGAC AGT GTCTGCAGAATC         TTTAAAACGAACTAA 100 40
SH08_RS20370 4111709 .. 4111735 + -15.3  -3.23853   AAGTCATTAAAAAGA         CAAAACAGGCC GCCTG GGCCTGTTTTG         TATTACTTCACAACG 100 39
SH08_RS20400 4116059 .. 4116077 + -12.4  -2.83517   ACTAATTTATTTTTC             GGGCGCAG CCA TTGCGCCC             TCCTCTTCTCTCCCT  89 36
SH08_RS20405 4117579 .. 4117608 + -10.7  -3.11192   CGTTAATGTCGTAAA       CCGGGCATCAGGC TTAC GTGTGATGTCCGG        TTAACTCGTGGTATG  79 35
SH08_RS20410 4118749 .. 4118766 +  -9.1  -5.55769   GCTCAAAACAAAAAA             CCGGAGT CTGT GCTCCGG              TTTTTTATTATCCGC 100 48
SH08_RS20420 4120635 .. 4120665 +  -8.2  -3.30039   CCAGGAGCTTTAATC       TCTGCCCCGTCGTT TCT GACGGCGGGGAAAA       TGTTGCTTATCCCTC  69 28
SH08_RS20425 4121288 .. 4121304 + -15.1  -5.78622   TTGTCCGACGATATT              GCCCCCG GTT CGGGGGC              TTTTTTTTGCGCTAA 100 53
SH08_RS20450 4126102 .. 4126116 +  -4.2  -3.90744   CTGGCCCACGCCAAC               CGGCAA ACT TTGCCC               TTCTTTACCGCAGAC  58 219
SH08_RS20490 4137033 .. 4137049 + -10.9  -2.57985   CTTCCACCAGGCTTT              GAACCAG CAG CTGGTTC              TCCGTTCGCTTCTCA  69 216
SH08_RS20500 4140158 .. 4140178 +  -6.7  -2.78696   TATGTTGCTTTGCCT            GGGCGACGC TAC GCTTAGCCC            CTTACTTATTTCTGG  57 266
SH08_RS20510 NONE
SH08_RS20515 4140478 .. 4140496 +    -3  -2.98381   CTTACGTTATAAGAA             GTTCCGTC GAT GATGGCGC             TAATTTCGTGAATTG  44 13
SH08_RS20520 NONE
SH08_RS20525 4142745 .. 4142761 + -13.7   -5.5112   GCTAAAGCGTCAAAA              GGCCGGA TTT TCCGGCC              TTTTTTATTACTGGG 100 45
SH08_RS20530 NONE
        panF NONE
        prmA 4145656 .. 4145670 +  -6.4  -3.86202   CCATCTCAGAGGATT               GGTCAA AGT TTGGCC               TTTCATCTCGTGCAA  65 271
SH08_RS20545 NONE
         fis 4147056 .. 4147081 +  -8.2  -5.29782   ATGCTTGATTAAAAA         GGCGCTACTC GGCATG GGGAAGCGCC          TTTTTTATAGGTGTC 100 55
SH08_RS20555 4148010 .. 4148020 +  -3.2  -2.94202   AAAGGATGTGTAAGC                 CTGG TTT TCAG                 ATTATTCATTTCGTG  44 39
SH08_RS20560 4148273 .. 4148297 +  -5.2  -4.13911   GAATTTACATGACAC          TTAATTCATT CGTTT GATGAATTAA          TTTCGTTATGTTTTC  65 39
SH08_RS20570 NONE
SH08_RS20575 4153607 .. 4153630 +  -8.2   -3.9392   GATAAATCAGAAACA          TAAAGGCGCT TTCG GGTGCCTTTA           TTATTTCCAGTGAAA  77 36
SH08_RS20580 4154078 .. 4154097 + -12.8  -4.59773   CGAAATAACTGAACA            GGGCGCGG AGTT CCGCGCTC             TTTTTAACGATACAG 100 33
SH08_RS20585 4154520 .. 4154543 +  -6.6  -2.75481   AAAAGATGATGATAG          CCACACTGGC TGCC GCCAGCGTGC           TGCTTGCCGTTGCAA  57 73
SH08_RS20590 4155542 .. 4155563 + -13.7  -3.07233   TCGGTGTGAGGTAAC           GAGCGTCGC TACG GCGGCGCTC            TCTTCAGCGTTATGC 100 42
SH08_RS20595 4156750 .. 4156760 +  -2.4  -2.71731   GAATATCTATAACCG                 CCGC ATC GCGA                 TCGTTGAACGCTAAG  40 1
SH08_RS20600 NONE
SH08_RS20605 4158680 .. 4158699 + -13.6  -3.83214   TTCGAAAAGCAAAAA            GGCCATCC TTTC GGATGGCC             TTTCGCTTGATTTGA 100 52
SH08_RS20645 4165636 .. 4165646 +  -3.2  -3.96327   CACCATGCCAGAAAA                 GGAG TTT TTCC                 TTTCTGATAGAACAT  55 412
SH08_RS20680 NONE
         fmt 4170636 .. 4170654 +    -8  -5.01535   TAGTCCACTCTTCTA             AGCCCGGT CTT GCCGGGCG             TTTTTATACTTATGA  95 41
SH08_RS20690 4171975 .. 4171989 +  -3.6  -3.35679   ATAACGGGTCGCGAC               TGATGA AAA TTATCA               TTCTGGGTGCCGGCC  49 45
        trkA 4173355 .. 4173382 + -15.8  -3.89938   CTTTCTTCTTGTAAT        TAATAAGGCGTC TAAT GACGCCTTATTA         TTTCCCTTTGATTAT 100 27
        mscL 4174052 .. 4174070 +  -3.2  -3.06686   TAAGGGATCATGTAG             TAATGC TTCTATC GCATTA             TCCTTTATCTGCCCT  43 184
SH08_RS20870 NONE
SH08_RS20875 4193770 .. 4193792 +    -4  -3.26947   CAACAGTCACGCCCC           TGCGCCATCG TCA CGGTGAGGCA           TTCATATGAGAATTC  51 7
SH08_RS20880 4195255 .. 4195276 +  -4.3  -2.61106   TATGCGCGTCGCCAG           TGCCACGCT GGAG AGCGAAGCA            TGAATTATCGCTATC  45 1
SH08_RS20885 NONE
SH08_RS20890 NONE
SH08_RS20895 NONE
SH08_RS20900 NONE
SH08_RS20905 NONE
SH08_RS20910 NONE
SH08_RS20915 NONE
SH08_RS20920 NONE
SH08_RS20925 4201727 .. 4201754 +    -7  -3.25102   CCTTCTTCGCGGATC        TGTGCTTGCAGA TAAT TTTGCAGGCCCA         TCTTCTGAATCAGAT  61 73
SH08_RS20990 4213323 .. 4213351 + -14.7  -2.85763   ACATTATTGAGGCGT        AAAAAAAGCGGGG ATT CCCCGCTTTTTTG        TCACTTTTTCGGTAT 100 31
SH08_RS21015 NONE
SH08_RS21020 NONE
SH08_RS21025 NONE
SH08_RS21030 4220966 .. 4220984 +  -6.7  -3.38046   GGCAGAGAGATCAAC            CGCACGCG CAAC CGC-TGCG             TCTTTCAGGTCGCGA  59 173
SH08_RS21040 NONE
SH08_RS21045 4222223 .. 4222247 + -16.5  -4.86731   TTAATCCCGTCGGAG          TGGCGCGTTAC CTG GTAGCGCGCCA          TTTTGTTTCCCCCGA 100 37
SH08_RS21050 4224387 .. 4224411 +  -4.2  -3.45571   TAAGGCATTCACGCC          GCATCCGACA TCTTT TGCCTGATGC          TTCGTATTTACGCCC  52 60
SH08_RS21080 4229216 .. 4229243 + -10.5  -4.43213   CTCATTAATTGCTCA        TGCCGGACGGC ACTATC GTCGTCCGGCC         TTTTCCTCTCTTCCC 100 33
SH08_RS21085 NONE
        nirD 4232345 .. 4232365 +  -8.9  -4.68994   CGGTTAATGTTTTAA            CGGGAGGCG CAA TGCCTCCCC            TTTTTGCATGGTCCT 100 34
SH08_RS21095 4233254 .. 4233264 +  -2.4  -3.39895   TTTAATCAAACTGAA                 ACGG CTG CCGG                 TTAATTACTAAGGGG  45 11
        cysG 4234670 .. 4234687 + -11.3  -3.74762   CATTAATTTAACCCG             GGCCAGA GAAT TCTGGCC              TTCTTAATGACTCTT  95 35
SH08_RS21105 4235114 .. 4235141 + -10.6  -4.65722   CCGGTTTAATTGCCC        GACGCCCTCTGGA TTT TCC-GAGGGCGTA        TTTGTTTCTATGTCC 100 65
        frlA NONE
        frlB 4237757 .. 4237778 + -12.9  -3.53343   AATATTAATCCCTCT           CCCGGCCCG GCAA CGGGCCGGA            TTTACGCAAGGAGTT 100 33
SH08_RS21120 NONE
SH08_RS21125 4239418 .. 4239445 + -16.4  -2.80699   GCCTGGTAGGTATAA        CGTTGGCGTGAG CATC TTCACGCCAACG         TGCTGTTACTTGCCG 100 32
SH08_RS21130 4240255 .. 4240297 + -14.9   -4.1899   TAACCGTAGGCCGGA TAAGATGCGCCAGCATCGC ATCCG GCGATGCTGGCGCGTTGAA TTTTACATCCCGTAC 100 38
        mrcA 4260890 .. 4260903 +  -9.5  -4.37711   TGTTCTGATTAAAAA               GGCGC TTCG GCGCC                TTTTCAGTTTGCTGA  88 33
SH08_RS21245 4264068 .. 4264102 +   -18  -3.39142   TTATCGAATAACACG     TTTGCGCGGCAGGTTA TGC TACCCTGTCGCGCAAA     TTGCTTCACTCTGGA 100 30
SH08_RS21250 NONE
SH08_RS21255 NONE
        hslO 4266120 .. 4266143 + -16.8  -4.12188   TCATTAATGAGTATG          TCCGGCAGAG AGGG CTCTGCCGGA           TTTTACGACTAATAC 100 34
SH08_RS21275 4269948 .. 4269969 +   -13  -4.46835   TTATAGAAAGCAAAA           CGGGAGGC ACCTTC GCCTCCCG            TTTATTTACCCTTCT 100 74
        greB 4272766 .. 4272780 +  -3.5  -4.56775   AGAGTCTTAACCTCC               TGCCG ATGGC TGGCA               TTTTTGCCAGCCAGT  65 44
SH08_RS21295 4275265 .. 4275285 + -15.5  -5.06414   TGCCTGACATAAAAG            TGCCGGAGA ATA TCTCCGGCA            TTTTTATTCCACAGC 100 125
        feoA 4275831 .. 4275843 +  -4.1   -3.1478   GGCCTTATTAGAAGT                GGAAG CGG TTTCC                TGTTAATACGGTGAT  49 7
        feoB 4278180 .. 4278191 +  -5.8  -3.29013   GCACCACCGGTGATT                GCCA TTAA TGGC                 TTCACTTATTCAGGT  57 18
SH08_RS21310 4278450 .. 4278474 + -12.2  -5.08824   CGCCTGTTTTGGAAA         GCCCGGTATGC GTCT GCAT-CCGGGC          TTTTTTGCGTGCGGC 100 52
SH08_RS21315 4279492 .. 4279518 + -10.8  -2.71712   AGAAGAGTTGGCTGC         GGCGAGTCAGTA AAG TTCTGTCTCGCC         ATTTCAAAAGCCACC  76 13
SH08_RS21325 NONE
SH08_RS21330 4281680 .. 4281713 +  -8.7  -2.53581   CCCTCTTTTGTAGAT     TGCCCGATGCGACGC TAAA GCGTCATTTCGGGCC      TACGTTGAACATGTG  65 47
SH08_RS21335 4283544 .. 4283556 +  -3.3  -4.93296   AAGCGTTGCGGAAAG                CTTGC GTC GCCAG                TTTTTATACTGGTAA  74 235
SH08_RS21350 4291548 .. 4291575 +  -3.5  -3.78026   GCACTGACGCGCTTT        TCACCGA-CG ACAAAAAAG CGTTCGGTGA        TATTTTCACTTTCGA  56 324
SH08_RS21365 4295819 .. 4295831 +  -6.9  -5.12068   GCTCCGCCACTTTGC                GGGCG ATG CGCTC                TTTTTCTTCGGTCTG  90 519
        glpD NONE
SH08_RS21425 4311209 .. 4311239 +  -3.1  -3.69323   TGGAACGCAATCATC       CCAACGATGGCAC CGACA GTGCCGAGGATGG       TTTCCATCATGGTCC  51 110
SH08_RS21455 4317094 .. 4317118 + -10.1  -2.90723   TGAAGTAAGATAGTG          CCCTTTTTCTG AGA TGGAAAAAGGG          TGTCATTCAAAATCG  73 33
SH08_RS21460 NONE
SH08_RS21465 4319119 .. 4319132 +  -2.3  -3.05384   GAAAATCATTGATAT               GGCCA TGAA TGGCG                TTGGATGCCGGGCAA  42 230
SH08_RS21470 4319995 .. 4320008 +  -5.3  -2.76322   TTTAGAATTTTACCC               GAATC ATAA GATTC                TGATATCTTAAATAA  50 380
SH08_RS21475 4320960 .. 4320972 +  -2.6  -3.53224   CCAGCCCGTAAACGT                TCGG TACGC CCGG                TTTGGCGGAGAAATC  47 482
SH08_RS21485 4322891 .. 4322922 + -16.6  -4.17556   CAGATGCAATCCACA      CCCCAGCGCAGCAAC TCT GCTGC-GCGCTGGGG      TTTATTGACGGTATA 100 73
SH08_RS21545 NONE
SH08_RS21550 4333988 .. 4334006 + -10.3   -2.5785   ATATTAGCAATTTGG             CGGCAAC CCAAA GTTGCCG             ATTAATGATTACTTC  74 54
        rsmD NONE
SH08_RS21585 4340829 .. 4340839 +  -8.2  -3.61268   GTCTGCTCCATTCCT                 CCGC TTT GCGG                 TTTGAAGCTTGCCTC  69 146
SH08_RS21595 4341848 .. 4341867 + -12.2  -3.01984   TCTGATAAAACTTGA            CTCTGGAG TCGA CTCCAGAG             TGTATCCTTCGGTTA  86 36
        zntA NONE
SH08_RS21610 NONE
SH08_RS21615 4345990 .. 4346017 + -13.4  -5.52384   TTTAAGATGATGAGG        CGGCCTCAGGGA CGTG TTCCGGAGGCCG         TTTTTTTAATCGCCA 100 43
SH08_RS21625 NONE
SH08_RS21630 4349062 .. 4349089 +  -7.1  -3.91984   CAGAACAGGTAATCA        GTATGACGAAT ACTTAA AATCGTCATAC         TTATTTCCGCCATCT  72 71
SH08_RS21635 NONE
SH08_RS21640 NONE
        nikC NONE
        nikD NONE
        nikE NONE
SH08_RS21660 4354579 .. 4354590 +    -3  -3.68064   AAAATCTTCAATTCA                TTGT GACC ACAA                 GTTTTTCTTCGCTTT  51 155
SH08_RS21665 NONE
SH08_RS21670 4359327 .. 4359338 +  -2.2  -3.17763   GATAGAAAAAGATAG                CCTT TATG GAGG                 TTCCTGCAATGTCAA  43 110
SH08_RS21675 NONE
SH08_RS21680 4361091 .. 4361132 + -10.3  -3.81755   CTAAAATTCAATAAA TTGCACCGATGCGTAGTC CCTATAA GCTTACGCATCGG-GCAA TTGTATTTACGCCAT  86 142
SH08_RS21720 4371374 .. 4371401 +  -6.4  -5.07486   ACGTACCGGATAAAA        CCAGCGTTGAC CATTTGC GT-AACGCTGG        TTTTTCTTAGGCATC  84 46
SH08_RS21730 4374793 .. 4374814 + -13.7  -5.66684   TGTAATCAGTCTCGA           GCGGGTCAG TTTA CTGGCCCGC            TTTTTTTATGCGTTA 100 217
SH08_RS21740 4376032 .. 4376049 + -14.1  -4.77757   CGACGTGTTCCTGAA             CGCCCGC ATAT GCGGGCG              TTTTGCTTTTTGGCG 100 52
        tppB 4377808 .. 4377831 + -16.8  -4.67641   TATTCTTGCAGAAAG          CAGGGTAGCG TTAT CGCTACCCTG           TTTTAGTTTTACACT 100 42
SH08_RS21760 NONE
SH08_RS21765 4383120 .. 4383146 +   -16  -3.43217   GCGTTAAATGTTAAA         GGGCTAAGAGTA GTG TGCTCTTAGCCC         TTAATTACGTTTCCG 100 34
SH08_RS21775 4383583 .. 4383597 +  -7.1  -5.47218   CTGGAAAGTAAAAAA               CCGAC GCAAA GTCGG               TTTTTTTACATCCGG  95 159
SH08_RS21780 4384355 .. 4384376 +  -5.9  -4.36914   AAAAATTTAGCTAAA           CACATATGA ATTT TCAGATGTG            TTTTATCCGGGAGGC  70 39
SH08_RS21785 NONE
SH08_RS21790 4386181 .. 4386194 +  -8.1  -3.30124   ATTTATGTCGGATGC               GACGC TGGC GCGTC                TTATCCGACCTACAA  66 84
SH08_RS21795 4387531 .. 4387541 +  -5.4  -4.22748   GAAATTCTTCTCGGC                 TGAC TCA GTCA                 TTTCATTTCTTCATG  65 23
SH08_RS21805 4389177 .. 4389199 +  -2.8  -3.06183   ATAATACCATAATAT           TGATTATTAG CAC TTTATAATCA           TTGAATAAAAATAGA  43 29
SH08_RS21810 4389998 .. 4390028 + -12.7  -2.55015   AATAACACCACCGAA       AGATGCAGATGCT TTCTC AGCATCTGCATCA       TGCATTACATCAAAT  86 36
SH08_RS21815 4391167 .. 4391180 +  -2.3  -2.62184   CAGCAATACGGCTGG               GGTCG AGTC CGACG                TGATCTAAAGACAGC  38 519
SH08_RS21835 4393044 .. 4393078 + -15.9  -3.26545   TACCCCGGTTGTCAC     CCGGATCATAGTCAC TTGAT GTGACTATGATCCGA     TTAATACTCTCTCCG 100 42
SH08_RS21840 4394516 .. 4394534 +  -3.1  -6.02345   AATGCTGGCAGGAAC             TGTTGGC AGAAC GGCAACA             TTTTTTTTGTCGTTG 100 188
SH08_RS21850 NONE
SH08_RS21855 4398999 .. 4399032 + -14.8  -3.78953   GTAACGTGTAAATGA     GAGTAAGGTTGAAC ATGAAG GTTCAGCCTTACTC      TTTCCTGCTAACCAT 100 37
        treF 4406705 .. 4406742 + -12.9  -3.52073   GGCGAACCATAATAT   TTTTACAGCCAGCCG CTAACTTC CTGCTGGCTGTAAAA    TTATCCTCTTCAGGA 100 29
SH08_RS21890 NONE
SH08_RS21895 4409902 .. 4409933 +   -13  -2.78596   CCTGGCTCCCCGTAG      GCCGGATAAGATGC GCCA GCATCGCATCCGGC       TATAATGCGCACATA  91 92
SH08_RS21900 4411719 .. 4411743 + -17.3  -3.45434   TCTAAATCTGTTTAA          TTGCCGGATGT CAG ACATCCGGCAA          TTATCATCACTTCTT 100 176
SH08_RS21915 NONE
SH08_RS21920 4415868 .. 4415903 +  -6.9  -3.26471   CAGCTCATCCATAAA    TACCTGATGGTTGTG CTAACT CATCACCATCAGGCA     TTACTGTGCAGGTGG  61 85
SH08_RS21975 NONE
SH08_RS21980 NONE
SH08_RS21985 4436813 .. 4436854 +   -11  -4.60797   TAGAGTCAAGATTAG CCCCCGTGGTGTTGTCAGGT GCAT ACCTG-CAACG-TGCGGGGG TTTTCTCTCTCCAGC 100 286
SH08_RS22000 4438495 .. 4438513 +  -7.3   -4.4715   AGCTGATTGAGTAAA             CCGGAGC GCATG GCCCCGG             TTTTGTGAGTTAACG  78 27
SH08_RS22025 4442694 .. 4442720 +    -5  -4.81249   TGCAGAATTTTCGTA         GGCCTGATAAGC GGA GCGCATCAGGCA         TTTTTGCCTTTGCCA  74 25
SH08_RS22060 NONE
SH08_RS22065 4450814 .. 4450836 + -11.3  -2.66695   TTACCCGCACAGCCA           TTCCCCAGC CGCGA GCTGGGGAG           ATCTTTGGTCAGCAC  73 88
SH08_RS22075 4453875 .. 4453902 + -14.3  -3.82481   CTGTAATCCCTTTCA        TGCCAGGTGAT GCAGAA ATCACCTGGCA         TTCTTCAGTTTTCCT 100 35
SH08_RS22080 4454958 .. 4454991 + -10.5   -4.2528   AGCCGCGACTGCGTA     GAGTAA-AGCCCGA TAATCGC TCGGGCTTTTACTC     TTTATTGGGTTGCAG 100 40
SH08_RS22090 4456454 .. 4456473 + -13.6  -4.08692   CTTTATTGCTGTTTA            CGGTCCTG ATGA CAGGACCG             TTTTCCAACCGATTA 100 52
SH08_RS22095 4456949 .. 4456968 + -11.4  -6.11392   GCACAGAATCTAAGA            TCCCTGCC ATTT GGCGGGGA             TTTTTTTATTTGTTT 100 54
SH08_RS22105 NONE
SH08_RS22110 4458951 .. 4458968 + -12.7  -3.44848   TTAGCGATAAAAAAA             GCCTGCC AGAT GGCAGGC              TATTTAATAACGGCG 100 268
SH08_RS22130 4463548 .. 4463573 + -11.9  -3.11619   GTGAGTTAAGTAAAA         GCCCGGTCA CATTGGAC TGACCGGGC          TTACGTGAGTTATTC  86 32
        xylF 4468579 .. 4468593 +  -4.2  -3.02144   CGTGTTGAGGCCAAC               GCCC ATAATGC GGGC               TGTTGCCCGGCATCC  46 515
        xylF 4469563 .. 4469591 + -12.4   -4.0641   AGCGAGCTGTAAGCG        TTACGCCCCAGC GCGGA GCGGGGGCGTGA        TTTCTCTCCATGCCG 100 29
SH08_RS22170 NONE
SH08_RS22175 4472354 .. 4472385 + -12.4   -4.7078   TTTGATAAAAATTTT      CTCAAAGCCGGTTA CGTA TTACCGGTTTTGAG       TTTTTGCATGATTCA 100 42
SH08_RS22180 4473649 .. 4473660 +  -7.2  -3.30124   GTGGTTGTCGGATGC                GGCG TGAA CGCC                 TTATCCGACCTACCC  64 81
        malS 4476969 .. 4476979 +  -2.4  -3.18912   GCAACAGTAACTTTT                 CCGG CTT CCCG                 TTCGTCAGTACCTCG  43 31
        avtA NONE
SH08_RS22200 4478512 .. 4478542 +  -9.1  -3.53444   CATAAACAAAGCGCA      C-TGTTCCGGCGTT GAGA AACGCCGGAAAACG       TTTCAAACAGGCTGC  73 11
SH08_RS22215 NONE
SH08_RS22220 4481707 .. 4481733 +  -5.2  -3.29144   TAACTATATTAATAA         TTCAGGTTGC TGCACAT GCGACTTGAA         TTATGACAGACATAG  55 86
SH08_RS22225 NONE
SH08_RS22230 4483495 .. 4483509 +  -2.8  -3.33696   CCGATCTCATCATCC               TCCCTT TGA AATGGA               TTAATTAAAAGGAAA  46 3
SH08_RS22235 NONE
SH08_RS22240 NONE
        sgbH NONE
SH08_RS22250 NONE
        araD 4488618 .. 4488654 + -10.8  -2.79796   CTCATTACGATCAAT    CATCGGGCTGTCGGTA ATCTC TTCCGGCAGCTCGCTG    TATCCTGCGCTCGCC  70 426
SH08_RS22265 4490898 .. 4490909 +  -2.2  -3.01001   TCAAGGTTATATTTT                GCTT CCGC GAGC                 TGTGCTTTCAGGCTG  42 521
SH08_RS22280 4492305 .. 4492316 +  -7.2  -3.30124   GTTTATGCCGGATGC                GGCG TGTA CGCC                 TTATCCGGCCTACGG  64 140
SH08_RS22310 4503754 .. 4503764 +  -3.2  -3.17763   ATAAAAAAAGATAGC                 CCTT GTG GAGG                 TTCCTGCAATGTCAA  46 27
SH08_RS22315 4504607 .. 4504617 +  -3.2  -2.56095   ATTGATAAGCTGAAG                 CGTT CAT AGCG                 TGAGTTGCCTATGCA  42 17
SH08_RS22320 4505544 .. 4505554 +  -6.8   -4.0162   AACATATGGGCCATC                 TGGG CAC CCCA                 TTTCTAATATGCAAG  69 211
SH08_RS22325 4506281 .. 4506298 +  -4.1  -3.97308   CCACCTGTTTATACA             GCATAAC TTTA GGTATGC              TTTCGTGTGTTTCAG  59 232
SH08_RS22330 4507256 .. 4507266 +  -3.2  -5.54192   TATATTAATAACTCA                 CTCT CCA GGAG                 TTTTTTTAACTTAGT  82 62
SH08_RS22345 4511634 .. 4511663 + -14.3  -3.38316   TCGTAAGTAATCCAA       TCCCACCCTCTCC ACAT GGAGAAGGTGGGG        TTAATTGCCTGATGC 100 31
SH08_RS22350 NONE
SH08_RS22355 4513976 .. 4513992 +  -2.9  -3.20494   AATTAATCAACGAAT              TGCGCAG TTT TTGAGCA              TGTTAATGATTACGT  44 408
SH08_RS22365 4514562 .. 4514587 + -14.1  -4.86731   GGATCAACAACCTAA         GGGCAATTCTC TGAT GAGGATTGCCC          TTTTCTTTACCAGAC 100 126
SH08_RS22370 NONE
SH08_RS22375 NONE
        lldD 4518625 .. 4518647 +   -12  -2.79302   CAATTTTCTGCTATC           CTGCCCCC GCACTAA GGGGGCAG           TATGCTAAACATCGT  83 199
SH08_RS22385 4519188 .. 4519205 +  -5.6  -3.18681   CATTAGATCCCATCC             CCATAC TCAAAT GTATGG              TTAATACCGTTGAAA  55 91
SH08_RS22415 NONE
SH08_RS22420 NONE
SH08_RS22425 4526858 .. 4526873 +  -3.4  -4.11235   ACCGACTCACTGACG              TATTAT GCAG ATAATA               TTTATATAATGATTG  58 389
        rfaD NONE
SH08_RS22455 NONE
SH08_RS22460 NONE
SH08_RS22465 4535655 .. 4535682 + -14.4  -2.89921   AAGAATAAACAAGTT        TAAGAAGTGAGT TAAA ACTCACTTCTTA         TCTATACAACTTAAT 100 39
SH08_RS22520 NONE
        coaD 4547741 .. 4547772 +  -7.2  -2.62043   GAAGTTAGCGTAGCG      TTTATGCCGGATGG TATG CCATCCGGCGCGCA       TGAATTACTTCTGGC  58 28
SH08_RS22550 NONE
SH08_RS22555 NONE
        slmA 4552528 .. 4552555 +  -9.8  -4.41348   CAGTTGCAGTAATAT        GACGCCGGATGA CTTT TCATCCGGCGAG         TTTCTTTAAACGCCA 100 29
SH08_RS22575 4555012 .. 4555035 +  -3.1  -5.06414   TTCCGCCTTCACAAA          TGCCGCCACT CAAAC AG-AGCGGCA          TTTTTCTTCCCCGCA  71 63
        dinD 4556210 .. 4556222 +  -4.9  -2.65354   AATAGCGATTTCACA                TAACT ACA AGTTA                TCAATTTCCCCTCCC  48 216
SH08_RS22585 4556946 .. 4556971 + -11.9  -3.89354   CAAAACCTGTGATCT         GCTGGGCAG CCAGCCAA CTGCCCAGC          TTCTTGATTTGCGCA 100 45
         gmk 4559517 .. 4559530 +  -3.1  -3.41913   CATGCCCAGTCATTT               CTTCA CCTG TGGAG                CTTTTTAAGTATGGC  49 56
        rpoZ 4559823 .. 4559833 +  -2.4  -2.83082   CGTCGTTAATCACAA                 AGCG GGT CGCC                 CTTGTATCTGTTTGA  41 32
SH08_RS22605 NONE
SH08_RS22610 NONE
SH08_RS22615 4564865 .. 4564886 + -11.5  -3.21912   GCATTTGTCTTTGTT           GCGGCGGCA CTTC TACCGCCGC            TTCATCGGTTAACCG  84 164
SH08_RS22625 4567851 .. 4567871 +  -2.6  -2.72511   GATTGCGCGTAAATC            GTGCATAA CTCCC TTATGTGC            ATTTCACGGGATGGA  41 105
SH08_RS22630 4569612 .. 4569640 + -14.5  -3.08312   GGTAAACATCAATCT        CGCCGGGTACGAC TCA GACGTACCCGGCA        TTCCATCAATAGATT 100 36
SH08_RS22645 NONE
SH08_RS22650 4574348 .. 4574362 +  -3.6   -5.0133   CGACTGGTACTTATT               TGTAAC TCA GTTATA               TTTTTTCGCCCGGTG  73 367
SH08_RS22655 NONE
SH08_RS22660 4576632 .. 4576644 +  -4.1  -3.91072   CCAGGCACCGCGCCA                CCGTT AAA AATGG                TTTCTGCCGCTTTAG  59 51
SH08_RS22670 NONE
SH08_RS22675 4577976 .. 4577989 +  -2.3  -4.45765   GACCAACGCTTCTTT               ACCTG ATAT CAGGA                TTTCTTCATTTTCAC  60 58
SH08_RS22695 4583437 .. 4583455 +    -3  -3.64812   AAGGTGCCTTTAATA             CCATCGGC AGC GCCAATCG             CTTTTTTAGGTACAA  51 297
SH08_RS22735 NONE
SH08_RS22740 NONE
SH08_RS22745 4591100 .. 4591121 + -17.3  -4.79451   TCAAGTCGCACCAAA           GGGGAGCGG GAAA CCGCTCCCC            TTTTATATTTAGCGT 100 48
        emrD 4592554 .. 4592591 +  -5.6  -3.89346   TAAGCGCACGTCACC   GCAGCATCGTCATC AGCTCCATGG GAGAACGATGCTGC    TTTATCAGATCACGC  63 38
SH08_RS22770 4594347 .. 4594357 +  -5.4  -5.31275   AGCGGGCATTATCGT                 CAGA ACT TCTG                 TTTTTTCTCCTCCAC  84 73
SH08_RS22785 4598667 .. 4598690 +  -3.8  -4.08216   CATCCAGAATAGCTT          TGGCGACCGAG GCG CTCGGTA-CCG          TTTTCGACAACGTAA  60 81
SH08_RS22805 4602139 .. 4602153 +  -3.4   -3.0701   TGGCGTAAGAGAGCG               CCGCCG CAC CGCTGG               TTGGATGAAGATTAT  43 114
SH08_RS22825 4605903 .. 4605936 + -13.1   -4.0098   GTAAAGGTTAAACGT     CGCTGCACGACGCCAC GCG GTGGCG-CGGGCAGGG     TTGTTTCCGTTCCGC 100 433
SH08_RS22835 4608205 .. 4608219 +  -5.6  -4.07568   TGGAGATCAGCAAGC               CGCAGA TAA TCGGCG               TTTTACGCGCAAAGC  65 354
SH08_RS22865 4613530 .. 4613574 +   -10  -3.34013   GCAGTAAACCAATAA TCAGTAAGCGGGCAAAC-GCG TTTA TGCTGTTTGCCCGCCCACAGA TTAATTCAGCACATA  76 26
        dnaA NONE
SH08_RS22895 NONE
        recF NONE
        gyrB 4615103 .. 4615126 -  -3.1  -3.30124   TCGTAGGCCTGATAA          GCGTAGCGCA TCAGG CACGCT-CGC          ATGGTTAGCGCCATT  47 39
SH08_RS22880 NONE
SH08_RS22875 4614466 .. 4614493 -    -4  -4.19258   ACACCCGAGGGAAAA        GGGGGATGCAAC GCGC GTTGCGTGCTCC         CTTTTTGCTTAGCGG  61 34
SH08_RS22870 4613527 .. 4613577 - -16.4  -3.57418   TATGCAGTAAACCAA TAATCAGTAAGCGGGCAAAC-GC GTTTAT GCTGTTTGCCCGCCCACAGATTA ATTCAGCACATACTT 100 23
SH08_RS22860 NONE
SH08_RS22855 NONE
SH08_RS22850 NONE
SH08_RS22845 NONE
SH08_RS22840 4607797 .. 4607818 -  -9.4  -4.87807   GCAAGATAGTAAAAA           GCCGATGC CTGACC GCACCGGC            TTTAAGAAAGTGGAT  95 80
SH08_RS22830 4605407 .. 4605461 -  -9.5  -3.24232   TGTTCCGCAAAGACA GC-TCGGTGCGCTCGCGCGTTGA AAAAAGCGAAG CCAACGCGCAAGC-CACCAATGC GGTTATTCCACCGGC  67 61
SH08_RS22820 4604362 .. 4604391 -  -2.1  -3.25169   CTAAGAAGCGAGTAA       GTACCTGCAAATC CGAA GATTCGCATATGC        TCCCTGACGGCGAGC  45 78
SH08_RS22815 4603868 .. 4603888 - -14.7  -5.82172   AGTAAGACAAAAAAA            GCCCCACCA GAA TGGCGGGGC            AAAGAGAATAGCTAG 100 41
SH08_RS22810 4602005 .. 4602039 - -11.5  -3.10071   AAATGCCAGCGAATA    CCAGGTGGAGT-ACCA TTTA CGGCGACTCCACCCGG     AAAAGAGTTAACCGA  84 33
SH08_RS22800 NONE
SH08_RS22795 NONE
SH08_RS22790 4598572 .. 4598604 - -11.3  -3.90922   AGCCGTGCTAAAGAA      TACGGACCAGCACCC AAC GGATGCCAGTCCACA      CAATTAACGTAACTC 100 205
SH08_RS22780 NONE
SH08_RS22775 4594313 .. 4594339 -  -8.7  -3.64259   AAGCAGCCTGAATAA         TGCCCGCCG GGTGATCAT CAGCGGGCA         TTATCGTCAGAACTT  75 32
SH08_RS22765 NONE
SH08_RS22760 4593031 .. 4593047 -  -2.2  -2.80016   CTTCAGCATCAATGA              CCTGAC TTCCT GTCATG              CGACTCTCTCAATAA  41 21
SH08_RS22755 NONE
SH08_RS22730 4590273 .. 4590297 - -10.7  -4.98531   TGCTTAAACGAAAAA         CCCCGCCCGG TTTGCG CCG-GCGGGG          TTTTGGAATCGTGTG 100 53
SH08_RS22725 NONE
SH08_RS22720 4588188 .. 4588215 -  -7.1  -5.75342   GGCGGGTAAAAAAAA        TACGCGCTTACC TTAAC GATAAGCGCG-A        TGTTGTTCAAGCCTT 100 47
SH08_RS22715 NONE
SH08_RS22710 NONE
SH08_RS22705 4584618 .. 4584640 -  -2.7  -3.55444   GGGTTACTCCTGAAA           TGAATACCT GCGTG AGGCATGCA           TTGTAAAAATCAGCA  48 125
        uhpT 4583174 .. 4583192 - -13.1  -5.95946   GGAATAATAAAAAAA             GCCCGGC GTCAT GCCGGGC             AAAAGTCACCAGTTA 100 44
SH08_RS22690 4579837 .. 4579863 -  -2.4  -2.65264   GCATTATCCAGATCA         TGAGTTCT CCTGCGTAATC AGAACTCA         TGATATCTGGAAACC  40 52
SH08_RS22685 4579380 .. 4579396 -  -2.9  -3.97088   GCTGATAAGACGAAA              CGGTTTC AAT GCAACCA              GTGAACGCCCTCGGC  54 14
        nepI 4577947 .. 4577961 -  -2.8  -3.70773   CCGGATATGTAAGAA               CAGCAA CAA CTACTG               ACCAACGCTTCTTTA  50 48
SH08_RS22665 4576410 .. 4576421 -  -4.4  -3.48438   AAGGAGCACAATTAA                TTGG CGGT CCAA                 AAGCCAGCATTTTGA  53 214
SH08_RS22640 NONE
SH08_RS22635 4569610 .. 4569642 -  -9.7  -2.67021   GCGGTAAACATCAAT      CTCGCCGGGTACGAC TCA GACGTACCCGGCATT      CCATCAATAGATTAC  71 37
SH08_RS22620 4564443 .. 4564462 -   -10  -4.36914   TGCTGCTCTACAAAA            CGCCGCTT TCTA AAACGGCG             CAAATTCGCCTGCAA  90 458
        ligB 4556927 .. 4556937 -  -5.4  -3.33361   CACGAAGGACACTAA                 GGTT CAA AACC                 TGTGATCTGCTGGGC  55 11
         rph 4553243 .. 4553260 - -11.3  -6.06529   TACAGACAAAAAAAA             GGCGACT CATC AGTCGCC              TTAAAAATCAGTTTG 100 33
        pyrE 4552530 .. 4552553 - -16.8  -2.77523   GTTGCAGTAATATGA          CGCCGGATGA CTTT TCATCCGGCG           AGTTTCTTTAAACGC 100 33
SH08_RS22545 4549299 .. 4549312 -  -6.7   -4.2074   TCCCGAACAGACAAA               GATCC CGAA GGATC                GCGCATAGCGGGTTA  71 38
        rpmB NONE
        rpmG 4548634 .. 4548669 - -18.6  -2.90194   ATGGGGGCAAGCAGA    TAACAAAAAACCCCGC CGGA GCGAGGTTTTTTGTTA     CATCAAAGCGAGAAT 100 40
SH08_RS22530 4547706 .. 4547725 -  -7.2  -2.57132   TTCCTGCCGGAGAAT            GTCCATCAG GCG CTGATGG-C            GAAGTTAGCGTAGCG  58 77
SH08_RS22515 NONE
SH08_RS22510 NONE
SH08_RS22505 NONE
SH08_RS22500 4541588 .. 4541600 -  -6.3  -2.50307   GAAACTCTCATTAAT                TGAGT AAA ACTCA                CTGTTTTAACGGTTT  53 40
SH08_RS22495 NONE
SH08_RS22490 NONE
SH08_RS22485 NONE
SH08_RS22480 4537666 .. 4537681 -    -4  -3.04894   AACTCCGCTTAAAAC              TGTCCT GGTG AAGACA               TGTAATTGTGGGATT  47 45
SH08_RS22475 NONE
SH08_RS22470 4535654 .. 4535683 - -10.9  -2.50354   TAAGAATAAACAAGT       TTAAGAAGTGAGT TAAA ACTCACTTCTTAT        CTATACAACTTAATC  76 15
SH08_RS22445 4530186 .. 4530215 - -13.1  -4.99035   GCATTGATATAAAAA       GAAAAAATGATGC CAAA GCATCATTTTTCC        TATCTCAGTTGGTAT 100 70
SH08_RS22440 NONE
         tdh 4527727 .. 4527744 - -12.7  -4.53303   TATCCTCAGATAAAA             GGGCTGG AATA CCAGCCC              TTGTTCGTGTTAATC 100 35
SH08_RS22430 4526287 .. 4526307 -  -8.2  -4.59109   TACACCGCCGAAAAA            CGCTGTGC CTGAT GCACCGCG            TAATCCGTTCCGTGG  88 199
SH08_RS22410 4521932 .. 4521944 -  -5.5  -4.25283   AGGGCGGCAGCAAAA                TGGAG TGT CCCCA                GAAGCTTATAACAAT  68 99
SH08_RS22405 NONE
SH08_RS22400 NONE
SH08_RS22395 4520024 .. 4520046 - -13.4  -2.90888   ACGATGAGATAATGA           CCGGCCCG TTCTGCG CGGGCCGG           GTCATAGCGGTAACA 100 55
        cysE 4518774 .. 4518793 -  -5.6  -3.40403   TGCCTGGGACGATAA            GCGCCTGCG CCG CGCGGG-GC            TGGACTATCACGAGT  54 407
SH08_RS22360 4513590 .. 4513608 -  -8.2  -4.10855   AAAAGCCTTTCAAAA             GTAAGCAA CGT CTGCTTAC             TGCCCCTCTACCTGC  79 22
SH08_RS22340 4508809 .. 4508824 -    -4  -3.41416   TTAAAACAATCAATA              GATCCA TAAT TAGATC               TCCGGGAACGTGGAA  52 19
SH08_RS22335 4507647 .. 4507659 -  -3.3  -3.30619   AATTAGTCCTTACAA                GGAGC AAA GTTCC                ATAATCTCCCCCCTC  47 45
SH08_RS22305 4498705 .. 4498727 -  -5.5  -3.14463   AACCTGGCTGATCAA           GGCCCTCTC ACACG GAGAAGGGC           GTTTAACATAACCAC  53 81
SH08_RS22300 NONE
SH08_RS22295 4495366 .. 4495392 -  -8.1  -5.13741   TTAATCTAATAAAAA         GCACATTGTAT TCATT AAACAATGTGC         TTTTTTTAAATTCAT  95 86
SH08_RS22290 4494075 .. 4494097 -  -6.2  -4.65838   GAGATAGTTGAAAAA           GCGGCTAACA ATT TGCCAGCCGT           TGTGGAAATGATGAT  77 40
SH08_RS22285 4492355 .. 4492368 -  -8.1   -3.4252   CCGTAGGCATGATAA               GACGC GTAA GCGTC                GCATCAGGCAATGAA  68 66
SH08_RS22275 NONE
SH08_RS22270 4490339 .. 4490391 - -11.4  -2.72043   AATGCTGCGTGAAAT TCGCCACCAGCTTGCTCA-GTCGCAG CAA CTGCGGCCTGAACAAGC-GGCGGAAA GCGAAGATTAATGAT  80 33
SH08_RS22260 4488218 .. 4488255 -  -7.6  -3.15861   TATTACGGGCAGTAA   TCCCTCACGCCGGGGC TTCATC GCCCCGGCACTACGAA    TTGATATGTTCCTTG  63 334
SH08_RS22210 NONE
SH08_RS22205 4478221 .. 4478233 -  -9.1  -3.54741   TATCAGCGCCTGAAA                GCACG CGG CGTGC                TGATGGTGCCGGGGC  71 337
SH08_RS22185 4473745 .. 4473774 - -19.5  -5.07011   GAGACAAAGTAAAAA       GCCTTATCCGACT GACA AGTCGGATAAGGC        TCAAGGAAATGCAAT 100 40
SH08_RS22160 4467947 .. 4467961 -  -6.4  -2.72973   TGAAAAAGGCAGAAT               CTCTCG GCG CGAAAG               TATTTGTACAGTCTG  51 167
SH08_RS22150 4466052 .. 4466080 -  -9.6  -5.40072   CGTTCCTTAAAAAAA       TGCCCGG-TATCG CTAC CGATAACCGGGCC        AACGGACTGCACAGT 100 47
SH08_RS22145 4464546 .. 4464569 -  -8.8  -2.75039   TATAGATGTGAATTA          TCCCCCACCC GGTC AGGCAGGGGA           TAACGTTTACGCCAT  67 32
SH08_RS22140 NONE
SH08_RS22135 4463548 .. 4463573 - -11.9  -4.43477   GTGAGTTAAGTAAAA         GCCCGGTCA CATTGGAC TGACCGGGC          TTACGTGAGTTATTC 100 35
SH08_RS22125 NONE
SH08_RS22120 NONE
        glyS 4458951 .. 4458968 - -12.7  -5.64274   TTAGCGATAAAAAAA             GCCTGCC AGAT GGCAGGC              TATTTAATAACGGCG 100 44
SH08_RS22100 4457079 .. 4457098 - -13.6   -3.3482   CAACGCCGTAAGTAA            GGCGGGAA TAAT TTCCCGCC             GAAGACTCTTACTCT 100 34
SH08_RS22085 4454965 .. 4454983 -  -7.4  -3.83205   ACTGCGTAGAGTAAA             GCCCGA TAATCGC TCGGGC             TTTTACTCTTTATTG  70 35
SH08_RS22070 4450406 .. 4450450 -    -2  -2.85657   TATAAAAGCGAATTA CTGGCGTGACTG-CATTCCGC TGGT GCGGGATGCCTATCTTGCCAA CGCGCAAAACTGGGT  41 295
SH08_RS22055 4448746 .. 4448760 -  -6.4  -4.56775   ATGCCTGGGGAAAAA               CGGCAT GAA ATGCCA               TCAGAACGGAATGAA  74 160
SH08_RS22050 4447356 .. 4447373 -  -8.4  -4.88129   AAAAAGCAGTAAAAA             GGGCCA GTTAAT TGGCCC              AAATTTTACGAGTCA 100 110
SH08_RS22045 4445354 .. 4445364 -  -6.8  -3.13164   GCGCCAATCACCGAA                 TGCG GGG CGCA                 TCTTACTGCGCAGAT  59 104
SH08_RS22040 4445246 .. 4445264 - -14.6   -5.1287   TGCAGATGCAAAAAA             GCCTGCTC GTT GAGCAGGC             TTTTCGAATTTGGTC 100 36
SH08_RS22035 4444539 .. 4444550 -  -4.4  -3.35679   CCTCGTGACCTACAA                TCTG TCAA CAGA                 ATGTGAAAACGTCAA  51 191
SH08_RS22030 4442509 .. 4442539 -  -3.9  -3.86897   TGTATTGCTCACAAA       TCAATTCCCGCCC TTATC GGACAGGGAATGA       AGTATTGCTGCCGGA  58 243
SH08_RS22020 NONE
SH08_RS22015 NONE
        dppD NONE
        dppF 4438495 .. 4438513 -  -9.5  -3.76402   AGCTGATTGAGTAAA             CCGGAGC GCATG GCCCCGG             TTTTGTGAGTTAACG  81 35
SH08_RS21995 NONE
SH08_RS21990 4436563 .. 4436588 -   -14  -5.00339   AGTAAGAACGAAAAA         GGCCGCAGAG TTTCCC CCCTGCGGCC          TGGTCCGGGCGCAAA 100 76
SH08_RS21970 4431799 .. 4431813 -  -4.3  -4.56729   ACGAAAAGACTAAAA               TCACA CGTCT TGTGA               CCTTCTAAATTGATT  66 248
SH08_RS21965 NONE
SH08_RS21960 NONE
        bcsA NONE
SH08_RS21950 NONE
SH08_RS21945 NONE
SH08_RS21940 NONE
SH08_RS21935 4419031 .. 4419052 -  -4.4   -4.7657   CAAAAAGGTTAAAAA           GTTTGAGC TGGCTC GCACAAAC            CAGCACTTTTTAAAG  71 63
SH08_RS21930 4417527 .. 4417555 -   -14  -4.52669   AAGAAGTGAAATAAA        CCTGAACTCACC CAGGT GGTAAGTTCAGG        CACAGGGGTCAATTA 100 91
SH08_RS21925 4415827 .. 4415856 - -11.5  -3.14487   CAGCATATGCAAAAG       GCTGGATAAAGTG TTAC CCCTCTATCCAGC        TCATCCATAAATACC  84 73
SH08_RS21910 4413874 .. 4413889 -  -5.4  -3.09004   CCAGGCGGAAAATGA              GGCAGCT TAT AGC-GCC              AGAACCGCCGTATTC  53 16
SH08_RS21905 4411581 .. 4411605 -  -8.5  -4.32048   TAATAAGAGTGAAAA          GCCTGATGCGC TAC GCTTATCAGGC          CTGAATTTCCATACA  82 170
SH08_RS21885 4406705 .. 4406742 - -12.9  -2.59447   GGCGAACCATAATAT   TTTTACAGCCAGCCG CTAACTTC CTGCTGGCTGTAAAA    TTATCCTCTTCAGGA  91 35
SH08_RS21875 4403216 .. 4403241 - -14.1  -5.08601   TTATCGTAATAAAAA         TCGCCCAAACA TTGC TGTTCGGGCGA          TCAAATTAATTATTG 100 35
SH08_RS21870 4401582 .. 4401620 - -16.1  -3.56142   GCGATTAATAAGCAA   CCGAATGCCCAGCTGTT TTTTT AAAGGCTGGGCATTCGG   TTTTTACAACGTTAT 100 45
SH08_RS21865 4400163 .. 4400178 -  -3.2  -4.62069   TTCTTAGCGCAAAAA              CTGCCA GATT TGGTAG               GACCAAAATTTATCC  65 293
SH08_RS21860 4398999 .. 4399032 - -12.6  -2.92667   GTAACGTGTAAATGA     GAGTAAGGTTGAAC ATGAAG GTTCAGCCTTACTC      TTTCCTGCTAACCAT  93 343
SH08_RS21845 4393896 .. 4393907 -    -3  -3.88618   AAGATAATCACGAAA                TGAT AAAA ATCA                 ATTCCCTGTCAGAGA  55 472
SH08_RS21830 4391784 .. 4391831 - -10.8  -3.00259   TATAGAGATTATATA TGAACAGG-AGGAATAGCTGCTT TTA AAGAAGATATTCCGGCCTGTTCA ATATGCAAGGAAGTA  79 62
        hdeB 4391378 .. 4391408 - -14.8  -4.93595   ATAAAAATGCAAAAA       GGAGCAGCAAGATG GCT CAACTTGCTACTCC       TTTTTACTTGCACCT 100 43
SH08_RS21820 4390505 .. 4390515 -  -5.4  -3.23853   TTCGCGCAAGCAACA                 TCAG GTT CTGA                 GCTGCATTGCGAATC  52 225
SH08_RS21800 4387408 .. 4387422 -   -10  -2.92026   GATTTCAATATGACA               GGACAG AAC CTGTCC               GGGTTCGTTCTAACC  68 245
SH08_RS21770 4383120 .. 4383146 - -13.8  -3.71649   GCGTTAAATGTTAAA         GGGCTAAGAGTA GTG TGCTCTTAGCCC         TTAATTACGTTTCCG 100 44
SH08_RS21755 NONE
SH08_RS21750 4377807 .. 4377832 - -13.3  -3.86346   TTATTCTTGCAGAAA         GCAGGGTAGCG TTAT CGCTACCCTGT          TTTAGTTTTACACTG 100 33
SH08_RS21735 4374620 .. 4374637 -  -8.3  -3.14218   TACGCACCAAAACGA             GCGGGTC AGCT GGCCCGC              TTCAGATTGTGACAT  67 233
SH08_RS21725 4371461 .. 4371474 -  -3.1  -5.37345   GTTAAGTATAAAAAA               CAGCA AAGT TACTG                TTTTTTTCAACCTGT  79 219
SH08_RS21715 4370108 .. 4370122 -  -2.9  -3.00046   TAAAAAACAACAGCA               TAAGA ATTAA TCTTA               GGATAAATTTTTATT  43 134
SH08_RS21710 NONE
SH08_RS21705 4368212 .. 4368248 -  -9.6  -3.60074   GAGAAAGTCCCTAAA    GATTGTAGAGGCGT CATCAGAAC ATGCCTCTACAATC    GATTAAGAAAACCTA  78 89
SH08_RS21700 4366306 .. 4366329 -  -5.3  -4.37658   AACTGGCTGACAAAA          CGGTATCCA TCCTGT TGGATAGCG           TTTCACGCCTGTTCA  68 124
SH08_RS21695 NONE
SH08_RS21690 NONE
SH08_RS21685 4361091 .. 4361132 -  -9.5  -4.32607   CTAAAATTCAATAAA TTGCACCGATGCGTAGTCCC TAT AAGCTTACGCATCGG-GCAA TTGTATTTACGCCAT  88 32
SH08_RS21620 4345736 .. 4345758 -  -7.6  -3.27923   CTGGAAGATCAGCAA           CGTAGCCGCG ATC CGCAGCTGCA           AGTGGTAACCAATAA  62 243
SH08_RS21605 4344116 .. 4344141 -  -8.3  -3.83724   AGGAGATAAGGCAAA         CCGATCGCA ACATTGAG CGCGATCGG          TCCCCTCGCCCCTCT  75 95
SH08_RS21590 4340626 .. 4340664 -  -6.8  -2.62263   ATGGCCCGCAGATGA  CCACCGCCGAAAAGGTA CGGATT TTCCTTTTCGGCG-TGT   TTGAACTGCTGGCCT  52 72
SH08_RS21575 NONE
SH08_RS21570 NONE
        ftsX 4336430 .. 4336479 -  -5.7  -3.68292   ACCGGGAAGAGACAA CGGGGT-CTCTTTCCCTGCTACGG AAC CCATTGCAGGGAAAGAGTATAACA CGCTTTTATTATTCA  61 34
SH08_RS21560 4335348 .. 4335367 -  -7.8  -5.75538   CCCAAAAAACAAAAA            CCCCGGAC TCTC ATCCAGGG             TTCTCTGCTTAATAG 100 47
SH08_RS21555 4333935 .. 4333946 -  -7.2  -3.30124   TTGTAGGCCGGATAA                GGCG TTTA CGCC                 GCATCCGGCATGAAG  64 94
SH08_RS21540 4331882 .. 4331902 - -14.7  -2.73159   GTAACCTTTCTAAAC            CCGCCCGCA TTT TACGGGCGG            TGGGATGATCACTTG 100 34
SH08_RS21535 NONE
        livM 4329656 .. 4329669 -  -3.1  -2.97503   TTAACAGATAATAAT               GGC-TG ACT CATGCC               TGCTCTCCTTTCGCT  44 19
        livG NONE
        livF 4328150 .. 4328165 -    -9  -3.53811   GTCACCTGTCTCAAA              GGAGTC TTTT GACTCC               CTATCAATCAACGTG  73 44
SH08_RS21515 4327987 .. 4327999 -  -4.1  -2.89304   GGGAAAATATAGAAG                GTCTG AAT CAAAC                TCTACAGATTGCTCA  46 46
SH08_RS21510 NONE
SH08_RS21505 NONE
SH08_RS21500 NONE
        ugpC NONE
        ugpQ 4322777 .. 4322810 -  -9.5   -4.0162   GCCGGAGAGGAGAAA     CGGCGACATGCTGAA TCAG CCCAGCACGCCGCAG      CCTGACATTCCGTTG  81 45
         ggt 4320511 .. 4320532 - -14.5  -3.79419   TGCCCTGACAAAATA           GCCCTCTTC CCAC GAAGAGGGC            CGCTAACCTTAGTAC 100 34
SH08_RS21450 4315171 .. 4315186 -  -3.2  -2.94099   GCCTGGGATGATAGA              GGGTGA AAAT TGACCC               CTCTGTTCAAAAAAA  44 67
SH08_RS21445 4314329 .. 4314360 -   -10  -4.10429   AACGACGCGGCAAAA      CCCCGGAAGCGTAC ATCA GCACGCGACCGGAG       CGAGCGAGGAAGCCT  88 75
SH08_RS21440 4313084 .. 4313110 -  -5.2  -5.01845   TACAAGAATTAAAAA         TGTTACGGGTAA CTG TTATCGGTAACA         TTGTCCAGCCGGACA  78 106
        gntK NONE
SH08_RS21430 4311148 .. 4311171 - -10.3  -4.17048   GTTTTTCGAAAAGAA          CCCGGTAGC GTCACA ACTACCGGG           CGAACAAACTTAACT  91 35
SH08_RS21420 4309199 .. 4309216 -  -9.8  -3.15996   TATTACGCACTAACA             GGGGCG GCATCG CGCCCC              AGATTTAATGAATAA  74 44
SH08_RS21415 NONE
SH08_RS21410 NONE
        glgC NONE
        glgA NONE
SH08_RS21395 4299558 .. 4299575 - -10.5  -5.41143   GATGGCGGAAAAAAA             CGGGACC CTTT GGCCCCG              TTCTATTTATTGGTG 100 44
SH08_RS21390 4299042 .. 4299066 -  -8.5  -2.68835   GACAAACACAAAACT          GCCTGATGCGC TAC GCTTATCAGGC          CTACGTGGTTTATGC  63 143
        glpE 4296954 .. 4296971 -  -6.3  -4.01888   AGGGGACAGTATAAA             GCGTTACG CGC CGTA-CGC             CACCTCTGCGGGAAA  67 11
SH08_RS21375 NONE
SH08_RS21370 4294903 .. 4294913 -  -8.2   -3.1855   CGTTTTAACACCGAA                 GCGC GGC GCGC                 CTGGTTGGCTTTTGC  63 419
SH08_RS21360 NONE
SH08_RS21355 4290781 .. 4290803 -  -8.4  -2.76404   CGGACGTAAAAGTGA           CGCCCAGC GCGTGTT GCTGGACG           CATTAAAACTGGCGA  60 514
SH08_RS21345 NONE
        malQ 4283396 .. 4283435 -  -5.7  -2.78018   ATTCGGGATGAATTA  GTAGGCCGGATAAGACGC GTCAA GCATCGCATCCGGCAT-C  AACCGCACTCTACTT  53 35
SH08_RS21320 4279125 .. 4279155 -  -4.6  -3.78775   TGCCTGATGATGAAA       TCATGCAGCACC GACGTAT GGCGCTGCTGGA       GTTAATTCAAAAACA  58 403
        ompR NONE
        envZ 4269948 .. 4269969 - -13.7  -4.65153   TTATAGAAAGCAAAA           CGGGAGGCA CCTT CGCCTCCCG            TTTATTTACCCTTCT 100 31
SH08_RS21270 NONE
SH08_RS21265 4266115 .. 4266149 -  -7.9  -2.79023   CAAGTTCATTAATGA    GTA-TGTCCGGCAGAG AGGG CTCTGCCGGATTTTAC     GACTAATACACCTGA  61 50
        nudE 4260890 .. 4260903 -  -9.5  -4.72272   TGTTCTGATTAAAAA               GGCGC TTCG GCGCC                TTTTCAGTTTGCTGA 100 170
SH08_RS21230 NONE
SH08_RS21225 NONE
SH08_RS21220 NONE
SH08_RS21215 NONE
        hofQ 4254561 .. 4254587 -   -10  -4.05446   TTCGTTAATGATAAA         CCCGCTTCGCTC AGA GAGCGCCGCAGG         ACATGAACTGAAACC  86 362
        aroK NONE
        aroB 4252823 .. 4252841 -   -11  -3.15621   AACCTGAAGCTAATA             GACCGCTT GAT AAGCGGCC             TGACCTTTCTTGTTG  79 41
SH08_RS21195 4251441 .. 4251468 - -14.2  -3.05596   CAGCGCTTCAGGCAA        CTCCCGCAACGA TAAA CCATTGCGGGAG         ATAACCTTGATTACT 100 36
SH08_RS21190 NONE
SH08_RS21185 NONE
SH08_RS21180 NONE
SH08_RS21175 4247929 .. 4247942 -  -9.5  -5.67967   ATGAGGATAAAAAAA               CCGGG TTTC CCCGG                TTTCAGAGTGATGAT 100 176
SH08_RS21170 NONE
SH08_RS21165 4246468 .. 4246485 -  -2.8  -3.90112   GTTCCTTGAATTAAA             TATTCA TTTTTT TGAATA              TTTAGGTTGTGCGAC  52 59
SH08_RS21160 NONE
SH08_RS21155 NONE
SH08_RS21150 NONE
SH08_RS21145 NONE
SH08_RS21140 NONE
SH08_RS21135 4240258 .. 4240294 - -16.6  -3.30124   CCGTAGGCCGGATAA    GATGCGCCAGCATCGC ATCCG GCGATGCTGGCGCGTT    GAATTTTACATCCCG 100 125
SH08_RS21075 4227153 .. 4227174 - -17.3  -3.46602   GCCGGGAGAGCAGAA           GCGCGGGCA AGAT TGCCCGCGC            GAGAAATCATTACGG 100 35
SH08_RS21070 NONE
SH08_RS21065 NONE
SH08_RS21060 4225726 .. 4225736 -  -2.4  -3.03214   ATGGCAATCAGAAAT                 CAGC GAT GCAG                 GAAATTAGCCAGCAG  42 14
        argD 4224367 .. 4224394 -  -8.4  -2.92792   ATGCAGGCTAAACCA        TCGGATAAGGCA TTCA CGCCGCATCCGA         CATCTTTTGCCTGAT  65 50
SH08_RS21035 4220844 .. 4220867 -    -6  -3.79687   ACGCCGGATAAAATA          CTATCCGGCT TCAC AACGGGATAG           TTAAGTCACGCGGCA  63 31
SH08_RS21010 NONE
SH08_RS21005 NONE
SH08_RS21000 NONE
SH08_RS20995 4213330 .. 4213344 - -12.8  -5.42259   TGAGGCGTAAAAAAA               GCGGGG ATT CCCCGC               TTTTTTGTCACTTTT 100 47
SH08_RS20985 4212034 .. 4212055 - -17.3   -5.7946   CCTGTAATAAAAAAA           CCGCCGCCT GGTC AGGCGGCGG            TTCTTAATGCTTATT 100 36
SH08_RS20980 NONE
SH08_RS20975 4210797 .. 4210815 -  -3.8  -3.40403   TTCGTTTCATCAGAA             CTGTACCA CCC TGTCACAG             GTCAGCGAGGCTTCC  49 1
SH08_RS20970 NONE
SH08_RS20965 4210059 .. 4210081 - -12.8   -4.7268   AAACACGTAATAAAA           CGTCCTCACA CAA TATGAGGACG           CCGAATTTTAGGGCG 100 81
SH08_RS20960 NONE
SH08_RS20955 NONE
        fusA 4206808 .. 4206833 - -15.5  -2.78935   ATATTCCTTACTATA         GTGCTCTCCCC TTCA GGAGAGAGCAC          GGGACTTTGGTATTA 100 51
         tuf 4205559 .. 4205574 - -11.8  -4.86939   CAACAAATGCAAAAA              GGGCGC CGAA GCGCCC               TTTTCAATTCAAAAC 100 55
SH08_RS20940 4202552 .. 4202578 - -10.2  -5.20606   AAATATGAATAAAAA         TAATGGGCTACC AAA AGTAGCCCATTG         ACAAAAAATGCGGCG 100 66
SH08_RS20935 4202251 .. 4202264 -  -3.8  -2.79579   AGTCAAAAAACACAC               TCCG TTTATG CGGA                CTCCTTAAACTCCGG  45 17
SH08_RS20930 4201680 .. 4201701 - -13.7  -3.14931   TGGATCTCTTATTAA           CCGGGAGGG TTCT CCCTCCCGA            CACGGCTCAACCTTC 100 32
SH08_RS20865 NONE
SH08_RS20860 4188866 .. 4188880 -  -8.6  -2.52795   AATTCGGCTAACTGA               GGTTCA GAT TGAACC               TGCTGTCAACTACGA  63 112
        rpsJ 4188413 .. 4188427 -  -3.5  -2.72379   TCAATCGCTCAATGA               CCTGA TTAAC CCAGG               CTGATCTGCACGTCT  44 16
SH08_RS20850 NONE
        rplD NONE
        rplW NONE
SH08_RS20835 NONE
SH08_RS20830 NONE
SH08_RS20825 NONE
SH08_RS20820 NONE
SH08_RS20815 NONE
SH08_RS20810 NONE
SH08_RS20805 4183723 .. 4183748 - -14.9    -5.252   TATGGGTAGAAAAAA         TAAACGGCTCA TTTC TGAGCCGTTTA          TTCGTATTGAGAGAG 100 50
SH08_RS20800 NONE
        rplX NONE
SH08_RS20790 NONE
        rpsN NONE
SH08_RS20780 NONE
SH08_RS20775 NONE
SH08_RS20770 4180709 .. 4180719 -  -3.2  -3.32963   ACCTCTACCTTAGAA                 CTGA AGG CCAG                 CTTCACGGGCAGCAT  47 9
SH08_RS20765 NONE
        rpmD NONE
SH08_RS20755 NONE
        secY NONE
SH08_RS20745 4178018 .. 4178047 - -12.3   -4.6645   CACAGACATACAAAA       GATTG-GCTGGCTA ATC TAGCCAGCTCAACC       CAACTTTGCAAGAAA 100 55
SH08_RS20740 NONE
SH08_RS20735 4177161 .. 4177179 -  -4.4  -4.18763   AACAAACCTGGAAAA             CGAGGCGT TAT ACGCGACG             TTTTTTCGGCGGACG  61 14
SH08_RS20730 4176511 .. 4176529 - -10.4  -3.14132   TCTCTTTGGTACTAA             GCTTTACT TGG AGTAAAGC             TCGACGATCAGGTGT  77 10
SH08_RS20725 NONE
        rplQ 4175041 .. 4175054 -  -9.5  -5.61596   ACGGGTATAAAAAAA               CCCGC CGGG GCGGG                TTTTTTTACGTTGCT 100 46
SH08_RS20715 NONE
        zntR NONE
SH08_RS20705 4173873 .. 4173889 -  -5.8  -3.54424   CGTGATTTGCTGAAA              GAGCAG AATAA CCGCTC              TTAACAAGCGCCTGA  59 26
SH08_RS20675 NONE
SH08_RS20670 4167424 .. 4167435 -  -2.2  -3.29511   CTGATTTCGCCATAA                CAAC TTAT GCTG                 AATTAAAGAAATGAT  45 40
SH08_RS20665 NONE
SH08_RS20660 NONE
SH08_RS20655 NONE
SH08_RS20650 4165097 .. 4165110 -  -2.3  -4.77173   GTCCCACAAAATAAA               CGGCT GGAG AGCGG                ATATCTGTATCTCGG  68 140
SH08_RS20640 4162646 .. 4162659 -  -2.3  -2.72471   TTTTCATCAGACAAT               CTGTG TGAG CACTG                CAAAGTACGCTTCTT  40 34
SH08_RS20635 4162520 .. 4162532 -  -6.3  -3.57309   TAAAACCTCTTCAAA                TTTGC CGT GCAAA                TTTGGTAGGCCTGAG  63 28
SH08_RS20630 4162357 .. 4162390 -  -6.7  -4.49756   TTTTAAAGAGCAAAA     CTTCGCAGTGAACCT TTGC AGGTACACTCTGAAG      TATTTTTTATTTAAT  76 52
SH08_RS20625 4159250 .. 4159263 -  -2.4  -2.78679   GGCCGCCAGGCAAAT               TCTG TTTTAT CAGA                CCGCTTCTGCGTTCT  41 84
SH08_RS20620 NONE
SH08_RS20615 NONE
SH08_RS20610 4158832 .. 4158881 - -23.3  -4.09117   TTCACCGACAAACAA CAGATAAAACAAAAGGCCCAGTC TTCC GACTGAGCCTTTTGTTTTATTTG ATGTCTGGCAGTTCC 100 28
SH08_RS20565 4147933 .. 4147947 -  -5.6  -5.21683   AGTGAAAAAAAGAAA               GACCGG CAA CCTGTC               AAAACGAAGCCGGTT  88 340
SH08_RS20505 4139881 .. 4139891 -  -2.4  -3.75024   GGCCATCATTAATAA                 CCAG ATC CAGG                 GTCGCACGCTGGTGA  51 109
SH08_RS20495 4136835 .. 4136858 -  -3.8  -4.14243   TATTCTACGTGAAAA          CGGATTAAAC GGCA GGTTAAACCG           AGTATCTTTGTGAAT  60 18
SH08_RS20485 4135466 .. 4135493 -  -8.4  -2.66316   TCTCGTATCAGACCA        GGCAGGGTAAAC AGAC ACTTCCCCTGCC         TGCATCCGATTACTC  63 35
SH08_RS20480 NONE
SH08_RS20475 NONE
SH08_RS20470 NONE
SH08_RS20465 4131757 .. 4131777 -  -2.4  -2.63208   TGTGACTCAAAAACC            CTTTGCCG GATGG CGGCCCAG            CATCTGTTTACATCA  40 33
SH08_RS20460 4127780 .. 4127829 - -12.1  -3.30124   TTGTAGGCCTGATAA GACGCACAGCGTCGCATCAGGCAA CGG CTGCCGGATGCGGCG-TGAACGCC CTATCCGACCTACGG  89 113
        tldD 4125937 .. 4125950 -  -2.3  -3.86897   GTTACGTTGTACAAA               CCTGT GCCA ACGGG                TTCCCCTCACCCTAA  51 117
SH08_RS20445 NONE
SH08_RS20440 4123663 .. 4123674 -  -2.2  -2.97029   CGTGATTAACCAAAC                TCAC GCAG GCGA                 TGGGCCATTTTACGG  42 4
SH08_RS20435 4121654 .. 4121672 - -11.7  -5.17353   ATAGCCATGAAAAAA             CCGACGC TTTTG GCGTCGG             TTTTGACTTAACTAT 100 33
SH08_RS20430 4121286 .. 4121306 -  -8.1  -2.78384   TCTTGTCCGACGATA            TTGCCCCCG GTT CGGGGGCTT            TTTTTTGCGCTAATG  61 35
SH08_RS20415 4118742 .. 4118773 - -12.5  -4.07568   GTCGTGCGCTCAAAA      CAAAAAACCGGAG TCTGTG CTCCGGTTTTTTA       TTATCCGCTAATCAA 100 41
SH08_RS20395 4114235 .. 4114245 -  -2.6  -3.59814   CCAGCACACAAAAAG                 TTTT GGG AAAA                 AAACTTTCTTGTAAC  50 109
SH08_RS20390 NONE
SH08_RS20385 4113222 .. 4113235 -  -9.5  -5.64274   TTAGCTATAAAAAAA               CCCGC CGAA GCGGG                TTTTTTCGAAAATTG 100 64
        sspA 4112246 .. 4112256 -  -3.2  -2.60797   TCCATACAGATTAAC                 TCCG GCC CAGA                 CGCATTTCACGTTCT  42 10
SH08_RS20375 4111707 .. 4111737 - -12.7  -4.77157   TTAAGTCATTAAAAA       GACAAAACAGGCC GCCTG GGCCTGTTTTGTA       TTACTTCACAACGCG 100 26
SH08_RS20365 4109069 .. 4109084 -  -2.6  -2.91276   GCTTGTCTGATAAAC              GATATA CCTT TATACC               TGTTATACCAGATCA  43 98
SH08_RS20360 4108095 .. 4108144 - -10.9  -2.89683   ATTGTAGGGTACAGA TGCGTTTATTTCCCCTCACCCG GTAGGGG CGAGCGAGGGGAAAC-AACTCA CCCGCGCTCTTGCAT  77 23
SH08_RS20355 4106516 .. 4106535 - -10.7  -2.78679   TTCCCTTAGCGAAAG            GCCCGGT ACATAG ACCGGGC             AACAGGATTAACTTT  77 33
SH08_RS20350 NONE
SH08_RS20345 NONE
SH08_RS20340 4104276 .. 4104288 -  -3.3  -3.32536   AAAGGAGCCGGAGAA                GCGCA TTA TGCTC                TGGCAGGTTTGCCTA  47 210
SH08_RS20320 4100952 .. 4100991 -  -6.2  -4.08394   ACATCTGCCGTAAAA  TCCACGCCTGACGGCTAC GCAC GTAGCCCGATGGCGAGGA   GACTTTGAAACGAAG  69 195
SH08_RS20255 NONE
SH08_RS20250 NONE
SH08_RS20245 NONE
SH08_RS20240 NONE
SH08_RS20235 4088688 .. 4088712 -  -7.2  -5.05712   ATAAATAAGCAAAAA         GCCTCG-CTGA TAAA TCAGACAAGGC          TCGACTTGCAGGCAG  89 85
SH08_RS20230 NONE
SH08_RS20225 4086959 .. 4086971 -  -4.8  -3.52102   AGTTTATCGACAGAA                CGCA GTTGA TGCG                TAGCTACACTAAACC  53 98
        rplU NONE
        rpmA 4084621 .. 4084642 - -15.9  -4.75174   TATCGAATGTAAAAA           GCCCCGCAA CGTG TTGCGGGGC            TTTCATCCGTTACCG 100 54
SH08_RS20200 NONE
        obgE 4082213 .. 4082239 - -15.9  -4.71382   ACAATTAGTCAAAAA         GAAACCCCGGC ACATG GCCGGGGCTTC         AGATTATTGACAAAG 100 177
        greA 4079985 .. 4079999 - -12.8  -4.36914   TGTTCGTTGATAAAA               GGCCGC ATA GCGGCC               TTTTTCCTTTCTTTA 100 74
        rrmJ 4078775 .. 4078789 -  -2.8  -3.40899   AACCTCTTATTACAA               CTGTGT TAA AAACAG               CGTCAGGATACTCTA  48 80
        hflB 4076755 .. 4076774 - -12.8  -5.56673   ATTGATAAGAAAAAA            CCCCGGAG CACG CCCCGGGG             TTTTCGGTACAAATA 100 61
        folP NONE
        glmM 4074503 .. 4074515 -  -9.1  -5.24129   TTCGCTGAGAAAAAA                GGCGA CAA TCGCC                GCCTTTTTAGCCAGT 100 52
        secG NONE
SH08_RS20150 4073843 .. 4073874 -   -11  -4.32436   AGACCAGGACCAAAA      CGAAAAAAGACGCT TTTC AGCGTCTCTTTTCT       GGAATTTGGTACCGA 100 32
SH08_RS20145 4071619 .. 4071638 -  -2.1  -4.68593   CTGACGATGGAAAAA            GGCGA CTCGGTGTTC TCGCC             AGATGATCGTATTGG  66 184
SH08_RS20135 4069881 .. 4069896 - -10.4  -5.60689   TCAGATAACAAAAAA              CCCCGA TAAA TCGGGG               CTTTATATAACTGAA 100 151
SH08_RS20130 4069371 .. 4069387 -  -6.5  -2.51207   CAGACTATTAAAAGT              GGGGAAC CAG GTTCGCC              TTCTGGATATTACTC  53 1
        nusA NONE
        infB 4065010 .. 4065024 - -11.4  -5.24129   TCTCCTGACAAAAAA               GGGGCT GTT AGCCCC               TTTTTAAAATTAATT 100 152
        rbfA NONE
        truB 4063579 .. 4063593 -  -2.8  -3.95071   CAAAGTGTTAAACAA               TTTACG CGA CGTTAA               GCGGCAGTATTCTAC  54 74
SH08_RS20105 4063186 .. 4063202 - -10.8  -5.03314   GTCAGCTTGAAAAAA              GGGGCC ACTCA GGCCCC              CTTTTCTGAAACTCG 100 47
SH08_RS20100 4060809 .. 4060830 - -15.1  -4.07568   CCTGCCCGGTTAAAA           GCCCCCCGC CGCA GCGGAGGGC            AAATGGCAACCTTAC 100 37
SH08_RS20095 4059789 .. 4059814 -  -7.5  -4.04023   ATTAACGAACAACAA         CGCCCTCACCC GTTA AGGTGATGGCA          ATCAAAAAAGATTAC  72 60
SH08_RS20090 4057714 .. 4057736 - -10.6  -5.82281   AAAGACAGAAAAAAA           GCCCCGAT GGTAAAA ATCGGGGC           TGTATATATTATTTT 100 69
SH08_RS20080 4056318 .. 4056340 -  -8.4  -2.98823   GCTGTCCTACATAGA           CCTGATAAGC GAA GCGCATCAGG           CATTGTGTAGGCAGC  65 67
SH08_RS20060 NONE
SH08_RS20055 4051910 .. 4051934 -  -2.1  -3.60151   CGCGGGAAAGGAGAA         CTAACGCTGG TGTTTT CC-GCGCCAG          TGGGCGATCGTTCGC  49 155
SH08_RS20045 4051227 .. 4051243 - -10.1  -2.70946   GTGGTTGATAAAGAT              CAGCTGG TTA CCAGCCG              GACACCGGACGATCT  67 63
SH08_RS20035 4049952 .. 4049962 -  -5.4  -2.65264   TGACCAGTCATAGCA                 TTCC CCA GGAA                 TAAGTTATGATAATT  49 83
SH08_RS20030 4048871 .. 4048882 -  -7.2  -3.50393   CCGTAGGTCAGATAA                GGCG TTTA CGCC                 GCATCCGACATGTTT  66 50
SH08_RS20005 4044244 .. 4044276 - -11.5  -4.07885   CATCGTGCGGTAAAA     GAAGACGTTGCGTT TTGATT AACGCAACG-CTTC      GGCACTGTTACCCCT 100 33
SH08_RS19930 4029552 .. 4029563 -  -5.8   -4.7416   GCAAAATGTTAAAAA                GAGG ACAT CCTC                 CTGCCGACTGGGAAA  81 127
SH08_RS19905 NONE
SH08_RS19900 NONE
        garR 4023602 .. 4023613 -  -7.2  -2.66316   CCTGTTACCACATGA                CGCC GGAG GGCG                 TTTCTCTTATTCGGC  58 88
SH08_RS19890 4021990 .. 4022017 -   -15  -4.07568   TCTGCCCCTCCAAAA        GCAAAAACCCGC CGAA GCGGGTTTTTAC         GTAAATCAGGTGAAA 100 442
SH08_RS19870 4017866 .. 4017886 -  -2.5  -3.54146   CGCCTGAATTAAATA            TGTAGGTAA CCG TAACCGACA            CCTGCAAGACAGACA  48 75
SH08_RS19865 NONE
SH08_RS19860 NONE
SH08_RS19855 NONE
SH08_RS19850 4013563 .. 4013574 -  -2.2   -2.7186   AAATGCCTTGAATCA                GCCT ATTT AGAC                 CGTTTCTTCGCCATT  40 61
SH08_RS22980 NONE
SH08_RS19840 NONE
SH08_RS19835 4010290 .. 4010324 - -11.5  -3.05384   TTGCCGTTCAGTGAA    GTGGAGCGGAACGACC TTAC GACCGTCCCGCTC-AC     GAGGCTTTACGCACT  83 32
SH08_RS19830 4008853 .. 4008870 - -11.3  -6.00086   AGATCACAAAAAAAA             GGTGCAC ATTT GTGCACC              CAAGGATGAAAGCTG 100 50
SH08_RS19825 4007270 .. 4007284 -  -2.8  -4.90217   CAAACATATTAAAAA               CCTTAA AAT TTCAGG               TAAATCAAGAAAATG  67 30
SH08_RS19820 4005676 .. 4005704 -  -2.3  -4.61527   AAAATTGGCCAAAAA       GCGCCAGC-CGG TGAAGC CCGTGGTGGCGA        AAGAACCTGCTCGCA  66 272
SH08_RS19805 4003887 .. 4003906 -  -9.2  -2.62425   AATTAATCTTAGAAT            TGGGGCGA TATT TCGCCCCT             TTTTATTAACAATAA  68 47
SH08_RS19740 NONE
SH08_RS19735 3992386 .. 3992410 - -12.9  -4.21922   GTATGGAAAAGCAAA          CGGCGCTTCAC ATT ATGAAACGCCG          TTTTTTATTAACAAC 100 52
SH08_RS19730 3991782 .. 3991792 -  -2.4  -3.34517   ATCGTCTGGCAAATA                 GCGC CCT GCGT                 AATTAATTGTTTAAC  45 36
SH08_RS19700 3985303 .. 3985334 - -12.2  -2.52795   AACGTGCTGAACGTA      GGCCGGATAAGGCG TTTA CGCCGCATCCGGCA       GGTAACTCCCAATCT  81 40
SH08_RS19695 NONE
SH08_RS19690 NONE
SH08_RS19685 3984164 .. 3984179 -  -4.6  -3.76641   AGGGCAAGAGCCAAA              CCGCGC GCTG GCGCAA               CCGCTGATTGATAGC  58 184
SH08_RS19645 3971491 .. 3971519 - -14.7   -3.9344   AAGCGTAATATCAAA        TCGGATGGCGA TACGACG TCGCCATCCGA        TCTTTTTATACGACG 100 31
SH08_RS19635 3967961 .. 3967976 -  -3.3  -5.72622   TGCACAAATAAAAAA              GATCA TTGCGG TGATC               GACCGCGCCGCTTTT 100 215
SH08_RS19625 3966295 .. 3966316 - -14.5  -3.91597   ACCAGATATAGCAAA           GGCTGACGA GAAA TCGTCAGCC            TTTTTCTTTTTATAT 100 46
SH08_RS19615 3965554 .. 3965572 - -11.7  -3.85698   GGCCCTCTGCACAAA             CGCCACC TTTTC GGTGGCG             TTTTTTATCGCCCAC  95 30
SH08_RS19595 3959954 .. 3959964 -  -2.4  -2.85668   CATTCTTACACCATA                 CGCC ACC GGCC                 CCAGTCCGATTTACT  41 202
SH08_RS19575 3955625 .. 3955637 -  -3.3  -3.22909   TTAAAGGAGGAAAAG                GCGTT GCT ACCGC                TTTTGGTGCCATCGC  45 324
        folB NONE
SH08_RS19560 3953817 .. 3953830 -  -8.1  -3.30124   TTGTAGGCCTGATAA               GACGC GCAA GCGTC                GCATCAGGCGTTGAT  66 117
SH08_RS19545 NONE
SH08_RS19540 NONE
SH08_RS19535 NONE
SH08_RS19530 3945714 .. 3945733 - -11.4  -3.71649   GGCTGAAACGGGAAA            GCCCCTCC CGAA GAAGGGGC             CTTGTATAAGGAAAG  88 224
SH08_RS19505 3942330 .. 3942345 - -11.8   -4.5394   ATACAAACACTAAAA              CGGGCC ATCA GGCCCG               TTATATCAGTGCTCT 100 31
        ribB 3934368 .. 3934389 -  -5.9  -5.63236   AGGGAAAAATAAAAA           CCGAAGCCTG CTA CAA-CTTCGG           TTTCTTGATTAAGGC  95 61
SH08_RS19460 3933942 .. 3933978 -   -11  -4.40963   ATTGGTTAAAAACAA    CATCAGAAGTTGTCCA GCGCA TGGACAACTTCTGCCA    GCTTCACGAAAGCCT 100 40
SH08_RS19450 3932203 .. 3932224 - -15.9  -2.84619   GAATAAGCCACGATA           CCGGATGGC ACTC GCCATCCGG            TAATTGTTAGCCTAT 100 32
        nudF NONE
SH08_RS19420 NONE
SH08_RS19415 3926618 .. 3926632 -  -2.8  -2.93769   AAAGAAGCGTAGACA               TCAGTA GCC TTCTGA               AGCGGTATCAGGTTG  43 11
SH08_RS19410 3926044 .. 3926055 -  -4.4  -2.88544   GTTGATCGTCAGAGA                TGGT GCAG ACCA                 AGAAAATCGACGATC  46 7
SH08_RS19405 3923606 .. 3923617 -  -2.2  -4.13995   GTTCCATAAAGCAAA                CCAA TTCC TCGG                 TATGGAACCGCTGCC  56 524
SH08_RS19390 3922327 .. 3922342 -  -6.8  -3.87815   GCCCACCCGGACAAA              CCGCTA CCGG CAGCGG               GCTTGGGCTATCGAT  68 174
SH08_RS19375 3919864 .. 3919886 -  -9.1  -2.90496   CTCCCTGCGAAATTA           TTCCCGGGA ACGCG TCCCGGGAG           CGGTAACAATTACGG  68 35
SH08_RS19370 3919301 .. 3919321 -  -3.9  -4.41114   TGACCATATAAGAAA            GTGGCGC ATTAGTA GCGCCAG            TTTGAAGCAGGAATT  65 65
SH08_RS19365 NONE
SH08_RS19360 3918437 .. 3918451 -  -4.9  -5.63517   CCGGTAAAGAAAAAA               GCGAG TTGCC CCCGC               TTTTCCATTAATTAA  91 37
SH08_RS19355 3916688 .. 3916714 - -11.5  -3.10732   AGATCAACGTGAATA         GCGCCGCCGGA CGTGC TCCGACGGCGA         TAAAGGCATCAATGT  84 34
SH08_RS19350 3914099 .. 3914117 -  -5.2   -3.3251   ATATATAGCATAACA             CCCTCTGA AGG TCTGAGAG             ACTGGCATTGTACGT  55 236
SH08_RS19345 3913315 .. 3913341 -  -2.2  -3.33151   CTGGCTAAAGTAATA         CCGTGCAGGAAA GTG TTCCCCGCAAAA         ATACAGATTGCCGAC  45 41
SH08_RS19340 3911836 .. 3911868 - -12.8   -2.6993   AGAAATCGAAAGGTA      TTCCATACTCGCCC TCCTC GGGCGAGTATGAAG      ATTACGGTACCGGAT  91 27
SH08_RS19335 3909506 .. 3909533 -  -6.9  -5.73339   AGAATGATAAAAAAA        TCCCCGGTAGC GTGTCA GTTGCCGGGGA         TATTTTTTAACGTCC 100 32
SH08_RS19310 NONE
SH08_RS19305 3904733 .. 3904752 -  -2.1  -3.16288   TAAACGCCATGAAGA            TCAGGTA ATGACG TTCCTGA             TGATCCTGCCAATTG  43 148
SH08_RS19290 NONE
SH08_RS19285 NONE
SH08_RS19280 3901165 .. 3901191 - -13.8  -5.44119   TTTAGGTTAAAAAAA         TGCCCGGTTG TGAAAAG CAACCGGGCA         TCATTGTGAATTCAC 100 265
SH08_RS19270 3899562 .. 3899582 - -15.4  -3.62775   ATGACCTGTTAATAA            CGGGCGCG CGAAC CGCGCCCG            AATCAGATCAGTGAT 100 33
SH08_RS19260 3897459 .. 3897470 -    -3  -3.04322   CGTAATCCCGTAAGA                GATA AACC TATC                 AGGAGAGATATTTAT  44 24
SH08_RS19255 3897067 .. 3897081 -  -2.8  -3.14931   CGTATGTTTGATCAA               TTTTCG AGG CGATAA               CCGGCCATAAAAAAG  44 7
SH08_RS19250 NONE
SH08_RS19245 NONE
SH08_RS19240 NONE
SH08_RS19235 NONE
SH08_RS19230 NONE
        hybD NONE
SH08_RS19220 NONE
        hypA NONE
SH08_RS19210 3890281 .. 3890312 -   -13  -2.58579   GCAATCGTGCACAAT      GCCTGATGCGACGC TGCC GCGTCTTATCAGGC       CTACGAAAGCTAATC  91 42
SH08_RS19200 3887225 .. 3887261 - -16.8  -3.16668   GAATATTTTGATTAA    TCCCCGTACTGATTAT TCTTC ATAATCAGTACGGGGT    TGCTACAACATGTAT 100 40
SH08_RS19195 3885444 .. 3885478 - -13.7  -4.68994   ATCACTAGTCAAAAA     TGGAAATGCCCGATC GCCAG GACCGGGCATTTTCA     GGAAGGTTAAATCAA 100 32
SH08_RS19185 NONE
SH08_RS19180 NONE
SH08_RS19175 3881908 .. 3881918 -  -5.4  -4.22748   CATGAAGAAATGAAA                 TGAC TGA GTCA                 GCCGAGAAGAATTTC  65 61
SH08_RS19165 3879505 .. 3879533 -  -2.9  -3.35679   TGCGCGGATCTACAA        CGCGGTGTTGCAG CGG CTGCCGCACGTCG        CCCAGCGCGCAGCAC  47 148
SH08_RS19155 NONE
        glcE NONE
        glcF NONE
SH08_RS19140 NONE
SH08_RS19135 3872208 .. 3872233 - -12.6  -2.83164   GCAGTTACTATCATA         GCCCCGACAA TAAAAC TTGCCGGGGC          TTTTTTGACGCTATT  89 39
SH08_RS19130 3870174 .. 3870200 - -12.4  -3.58779   AATAATGTAAATGAA         GCCGGATGAT ATTAACG ATCATCCGGC         TTTATTGATTTACGA 100 35
SH08_RS19120 3865082 .. 3865115 - -13.1   -2.8294   TAGGCCCGATAAGCA     GGCGCATCGGGCAAA TGTG TTAACCCGGTGCGCC      TTATTTCATGCCGGA  91 73
SH08_RS19115 3864129 .. 3864145 -    -3  -3.18144   AATAAGAGTTAAAAT              GTCACT TTGAT AATGAC              GTGGTTATCATTAAA  46 36
SH08_RS19110 NONE
SH08_RS19105 NONE
SH08_RS19100 NONE
SH08_RS19095 3861069 .. 3861085 - -11.5  -3.65581   ACTAATTCTTAAGAA              CCCGCCC ACA AGGCGGG              TTTTTGCTTTTGGAT  90 143
SH08_RS19080 3857599 .. 3857620 - -11.5  -5.30616   TTACGCAAAGAAAAA           CGGGTCGCC AGAA GGTGACCCG            TTTTTTTTATTCTTA 100 38
        trmB NONE
SH08_RS19050 NONE
SH08_RS19045 3852257 .. 3852280 -  -8.8   -5.4505   TCCCTCAAGAAAAAA          TCAGGCCAGC ATTT GCTGGCCCCA           GATTGATAACAAAGT 100 2
SH08_RS19040 3851479 .. 3851501 -  -9.2  -4.12315   AAACGAAGAATTAAA           CGGCATAAAA AAG TATTATGCCG           TCTTAAAATAGAGGA  85 41
        ansB 3850267 .. 3850287 - -14.7  -4.74103   GTCTGAAGTGAAAAA            GCCCCGGCA CGA TACCGGGGC            GAGGCGATTAGTACT 100 33
SH08_RS19030 3848730 .. 3848742 -  -6.2  -4.30576   TGCGTACCACCAAAA                CGCG TCATC CGCG                TGGTTTTATGCAAGG  72 454
SH08_RS19000 3844467 .. 3844484 -  -7.7  -4.15044   CGGGCGCTCAACAAA             GGCAAAG TTGA CTCTGCC              TCTGCGGTTATTATT  76 254
SH08_RS18955 3836724 .. 3836741 -  -8.5  -4.52703   GAAACCACGAGAAAA             CTCTTGT TTTT ACAAGAG              CGCCCTTGTTCAGTC  87 296
SH08_RS18945 NONE
SH08_RS18940 3834446 .. 3834478 - -14.9  -5.71712   GTCGATATAAAAAAA      CCCTTCCGCGTCG TTAGGCC CGACGAGGAAGGG      TTGGATTTGTCACAA 100 95
SH08_RS18935 3833419 .. 3833450 - -10.8  -2.52464   CGGGTGCCGAACGTA      GGTCGGATAAGGCG TTCA CGCCGCATCCGACA       TTAATGGCACGTTTT  76 65
SH08_RS18925 3830222 .. 3830237 - -10.4   -5.5074   CAAGGTAATAAAAAA              GGTCGC CGAA GCGACC               TTTTTACCCGAAATG 100 45
        cmtB 3829500 .. 3829516 -  -3.7  -3.34534   TAGAGGAGAGAGTAA              TTATCCG CGG CTGATAA              TGTCCGCTAATTGTT  49 9
SH08_RS18915 NONE
SH08_RS18910 3826776 .. 3826804 -    -8  -2.97489   GTAACGCGAAATAAT        GGCCACGCCAGG GACAT CATTGCGCGGCC        TCCCCGATATCAACG  62 13
SH08_RS18905 NONE
SH08_RS18900 NONE
SH08_RS18895 3824374 .. 3824403 -  -3.5  -3.53343   AATCGTCCGGGGAAA       CCTTACCTGTCGCA AAC TGCGACTGATT-GG       TTAATTGTCGAACAT  51 211
        gapA NONE
SH08_RS18885 3822045 .. 3822062 - -12.7  -3.90922   AGCGCGCTGAAACAA             GGGCAGG TTTC CCTGCCC              TGTGATTTTTTACTT 100 35
SH08_RS18880 3820737 .. 3820753 - -11.5  -5.40072   TTTTGGCGAAAAAAA              GACCCGC AGA GCGGGCC              TTGAGATAAGCAGAA 100 50
SH08_RS18875 3819526 .. 3819551 - -11.9  -3.33839   AAAACTAATAAGAGA         GAGGCCAGAGA GTAT TATCTGGCCTC          AGCGTTGATTACGCA  89 34
SH08_RS18870 NONE
SH08_RS18865 3817922 .. 3817947 - -13.3  -2.64472   TATCGGGTAAAGGCA         TTAGCCCGACG AATA CGTCGGGCTAC          AAATATTATTGTGCT  93 31
SH08_RS18860 3816806 .. 3816818 -  -3.3  -4.11216   TCGCTATCTGGAAAA                TGCGC CTG GCGGA                CATATTCACCACGAT  58 97
SH08_RS18830 NONE
SH08_RS18825 3809091 .. 3809109 -  -3.2  -5.27399   CAACATATCAAAAAA             TAATATTG CGG CAATATGA             ACGTTTGCGTCGCGA  79 196
SH08_RS18820 3807748 .. 3807770 - -15.6  -5.66684   GAAGGGATAAAAAAA           CGGGCAAGTC AGT GACCTGCCCG           TTGATTTTCAGAGAA 100 47
SH08_RS18805 NONE
SH08_RS18800 NONE
SH08_RS18795 3802949 .. 3802961 -  -3.3  -3.05597   TTTATTCCTTAAAAC                CGCCT TCA ACGCG                CCACCCAACCGAGGG  44 18
SH08_RS18790 3801662 .. 3801685 - -10.3  -4.39386   TTCAAATGAGGAAAA          TCTCCCGGC GAAAAA ACCGGGAGA           TGAAAGTGTGATGGG 100 69
        gcvT 3800190 .. 3800210 -  -8.9  -3.16667   CAAAAAAGTAAATCA            CGCGACGGC TTT GCCGTTACG            CACAAAAACAGGTTT  69 2
SH08_RS18780 3799708 .. 3799749 -    -8  -3.14132   CTCTCTCCTTACGAA GAGAGTGAGGGTGAGGCA TAAATT TTCCTCACCCTGATCCTC  TCCCGCAGAAGAGGA  63 50
SH08_RS18775 3796743 .. 3796756 -  -9.5   -4.7373   TCATCTGACTAAAAA               GGCGC CGAA GCGCC                TTTAGAAAATAGTCG 100 51
SH08_RS18770 3795728 .. 3795753 - -13.4  -2.79023   TAAGTCGATGAAGTA         CCGGATGCAA TACTTG TTGCATCCGG          TCAGACAACTTCCCT  93 44
SH08_RS18760 3793821 .. 3793832 -  -4.4    -3.281   GCGTAACTGAGAATA                GTTC CAGT GAAC                 ACCTGTTAGCTAAAA  51 119
SH08_RS18755 3793019 .. 3793030 -  -7.2  -3.34962   CCGTAGATCGGATAA                GGCG TTCA CGCC                 GAATCCGGCAGTTGT  64 98
SH08_RS18745 NONE
SH08_RS18740 3790651 .. 3790663 -  -4.8  -2.72144   GGATTTTGGTGAAAT                CCAG GAAGA CTGG                GAAGCCGTCTGGGAT  46 392
        xerD 3789461 .. 3789476 -    -4  -2.87132   CGTTCTTTTCAGACA              TCACGCC CGC GG-GTGA              TGCTGTTGATGAAGT  46 10
SH08_RS18725 NONE
SH08_RS18720 3786939 .. 3786965 - -11.7  -3.30903   AAAATGCGGTGATAA        GAGCG-GGATTG TACC CAATCCACGCTC         TTTTTTATAGAGAAG  86 47
SH08_RS18715 NONE
        lysS 3784233 .. 3784250 - -10.5  -5.95539   GCTTAAATAAAAAAA             CCCCGAC ATTT GCCGGGG              TTGTGAGCATAACGT 100 46
SH08_RS18685 NONE
SH08_RS18680 3779107 .. 3779132 - -11.1   -3.1352   GGGCAATCTAATAGA         TTCTCCGCGCC TTTC AGCGCGGAGAT          TTCTTTCAGAGAGGA  79 31
SH08_RS18635 3764883 .. 3764897 -  -9.2  -3.14683   ATATCCTTTCAGTAA               CCCGGA ATA CCCGGG               CCGCTAATTCACAAA  72 29
SH08_RS18630 3763014 .. 3763039 - -11.8  -3.78329   TGTCAGTAATTTAAA         GGCCGGGTGG GTAATA CCATCCGGCC          AAAGATTGTCAAGTA 100 214
SH08_RS18600 3754585 .. 3754616 - -10.8   -4.5528   GAAAACGAAGTAAAA      GGATATCCGGCCTG AATT CAGGCCGGATTCAC       TGAGGTTATGTGTTT 100 31
SH08_RS18580 NONE
SH08_RS18575 NONE
SH08_RS18570 NONE
SH08_RS18565 3748254 .. 3748273 -    -8   -2.5076   AACTAGTATTAAGAC            TATCACTT ATTT AAGTGATA             TTGGTTGTCTGGAGA  60 55
SH08_RS18560 NONE
SH08_RS18555 3746924 .. 3746934 -  -3.2  -4.36914   CCTTTCTCGATAAAA                 GTGA CAA CCAC                 TGAGTAAACAGATCA  61 77
SH08_RS18550 NONE
SH08_RS18545 NONE
SH08_RS18540 3745846 .. 3745856 -  -3.2  -5.40072   TTTTGCGTAAAAAAA                 TACC ACA GGCA                 TTAAAAAATCATGAG  79 97
SH08_RS18535 NONE
SH08_RS18530 3744568 .. 3744581 -  -3.9  -4.25283   ATGCGCTCACCAAAA               GTTAA ATTC TTAAC                CATCTTCACGTTTTG  63 518
SH08_RS18500 3740384 .. 3740394 -  -5.4  -3.82205   GTAACAGAGCAATAA                 TGCA TTG TGCA                 AGGTAAACTAAAATA  61 180
SH08_RS18475 3734851 .. 3734865 -  -3.6   -4.8622   GTTTTCAATTAAAAA               TAAAAC AAT GTTTCA               TTTTTAAGTTAAGGA  70 185
SH08_RS18470 NONE
SH08_RS18465 3733071 .. 3733088 - -12.7  -5.29782   TACAGGTATAAAAAA             CCCTGCC ATGC GGCAGGG              TCATAAAAGTAAGAA 100 48
SH08_RS18460 3731345 .. 3731371 - -18.8  -5.30155   CTATTAACGAAAAAA         GGGCCGGATGTA CAG CACATCCGGCCC         GTGAAATCAGACGCC 100 32
SH08_RS18455 3730306 .. 3730334 -  -3.7  -2.93869   CATGATCGTAGAAAC        CCACAGCGCCG CGTCAGT CTGCGCAATGG        TACGGGCGGGGGTAG  45 248
SH08_RS18445 3728237 .. 3728248 -  -3.6  -2.76263   GTCATCATGCAACCA                GCGA CTAA CCGC                 AGTTAAAGCAATTCC  45 28
SH08_RS18435 NONE
SH08_RS18430 3723254 .. 3723279 - -16.3  -3.27475   TCCGGCACCATAAGA         TTAACGCCGGT TAAA ACCGGCGTTAA          ATATTAATGACGGCG 100 29
SH08_RS18395 NONE
SH08_RS18390 3716702 .. 3716712 -  -6.8  -3.68506   GAACAGCGATTGAAA                 TGCG CGC CGCA                 GGTTTCAGGCGCTCC  65 115
SH08_RS18385 NONE
SH08_RS18380 3714934 .. 3714953 - -10.7  -5.44119   CGGAGGGTAAAAAAA            CCGACGC ACACTG GCGTCGG             CTCTGGCAGGATGTT 100 47
SH08_RS18375 NONE
SH08_RS18370 NONE
SH08_RS18365 NONE
SH08_RS18360 NONE
        recC 3709609 .. 3709627 -  -7.4  -2.69471   CTATGTTTATATAAC             CATCAGTC CGT GACTGGTG             CGCATCATAAAGTAA  58 72
SH08_RS18350 NONE
        recB NONE
        recD 3701198 .. 3701242 - -12.9  -4.30978   GGTAAGCGATGAAAA TCGTCGGATGCGACATGCG TAACACT CGTACGTCGCATCCGGCAA TTACGTTTATTCCCG 100 32
        amiC 3698350 .. 3698363 -  -5.9  -5.24129   GTCTCCCATAAAAAA               GCGCC ATTC AGCGC                CTTTTTATCATCCCC  85 33
        mltA 3696476 .. 3696496 - -10.4  -4.93365   CCTCAGAATTAAAAA            GGGCGAGG TTATC CCTCACCC            TAAACGCATAAATGC 100 224
SH08_RS18305 3695608 .. 3695645 - -17.1  -3.59946   GGTTTAAGCACAGAA   CCGGGTCGGATAAGACG TTCG CGTCTCATCCGACCTGA    TTGTTTAACCCTGAC 100 30
SH08_RS18290 3693488 .. 3693507 - -10.7  -2.57423   ATAGTGATTAATGTA            GCACCGC CTAATT GCGGTGC             TTTTTTTTACCTTGC  76 50
SH08_RS18285 NONE
SH08_RS18280 NONE
SH08_RS18275 3690661 .. 3690682 -  -2.9  -3.09635   ATCTGGATGAGGTAA           CGCACATTA TTTC TGATGAGCG            CCAGGTTGCAACTTC  43 100
SH08_RS18245 NONE
SH08_RS18240 3682234 .. 3682245 -  -2.2  -4.74801   GAATCGGACCAAAAA                GC-GC CAC GCAGC                TGCTGGTCGAGTTTC  68 259
SH08_RS18210 3675203 .. 3675214 -    -3  -4.41047   ATGCCTTAAGGAAAA                TTTC ATAT GAAA                 GTTAAGAATTAACAA  61 160
SH08_RS18205 3674780 .. 3674805 - -15.5  -5.84381   GCAGGAATAAAAAAA         GGGAGCACTGT ATTC ACAGCGCTCCC          GGTTCGTTTCGCAGC 100 194
SH08_RS18200 NONE
SH08_RS18195 NONE
SH08_RS18190 3672867 .. 3672885 -  -4.4  -4.93898   ATAGCAGTATAAAAA             GCGCGCCA TAG CGGCTCAC             CGTGCAACAACACAA  74 289
SH08_RS18185 NONE
SH08_RS18180 NONE
        gudD 3668624 .. 3668643 - -11.4  -3.58522   AGCATCAGTCTCAAA            CCGGCTCC AGAT AGAGCCGG             TTTTGGTTTTCTGTC  90 41
        rumA 3664289 .. 3664306 -  -5.5  -2.80816   CCTTTAGGGACCAGA             CCTGCCG AAAT CGGCAAA              TCGCAACTATTTAAC  50 32
        relA 3662001 .. 3662013 -  -6.3  -3.34534   TACAGTATATATCAA                TCTAC ATT GTAGA                TACGAGCAAATTTCG  59 43
SH08_RS18155 NONE
SH08_RS18150 3661338 .. 3661349 -  -2.2  -3.57144   TCTGTCAGGTGGAAA                CCTG TGAC CAGA                 ATAGAAGTGAGTTAG  47 46
        mazG 3660420 .. 3660435 -    -4  -4.43844   TCAGGAGTGAGAAAA              TAGCCCC TTT GGGG-TA              AATGTTTTTGACGCA  66 98
        pyrG 3658600 .. 3658624 - -18.7  -4.07562   GAAACTCCAGACAAA          CAACGCGTACC CAG GGTACGCGTTG          CCGCTCTAACTTTTT 100 44
         eno 3657213 .. 3657232 - -13.6  -5.37345   CTCAACCATAAAAAA            TGCCAGCC CGGA GGCTGGCA             TTTTTAAATCAGATA 100 50
SH08_RS18120 3655302 .. 3655342 -    -5  -4.08279   AGAGGCGACAAACAA TATAAATGAGTAGAAGTCT TTAC AGG-TTCCACCCATTTATA  ACGCTTATAAATGTT  63 44
SH08_RS18105 3650089 .. 3650100 -  -2.2  -4.55004   AAGAGAAAACAGAAA                CCAC CGTT ATGG                 GTTAGCGCACTAAAT  60 27
SH08_RS18100 3648541 .. 3648570 - -11.4  -4.21936   CTGAGAAGCCGAAAA       GGCAACGCCCCG TCATCG CGGAACGCTGCC        TGACACATTATTTTT 100 33
SH08_RS18095 3647160 .. 3647171 -    -3  -3.12668   CTTTAAACGCTAACA                GAAT GTTC ATTC                 GCACCTCCTACATTT  46 1
SH08_RS18090 NONE
SH08_RS18085 3645255 .. 3645277 -    -4  -4.60797   GGGTGACAGAGAAAA           TCCGCCAACC GCT GATTGCCGGT           GGGCTGGTGTGCGAT  70 281
        cysJ NONE
SH08_RS18055 NONE
SH08_RS18050 3638146 .. 3638171 -  -9.7  -5.45802   CTCGCAAAATAAAAA         CGCCCCCATCA TTTC TGACAGAGGCG          TTTAATTTGTCCGGC 100 46
SH08_RS18045 3635078 .. 3635100 -    -7  -4.55128   ACCGGGAAATTAAAA           GAAGATGTAC ATT GTGCACCTTC           CCTACTTAAGTAGGG  76 92
SH08_RS18040 NONE
SH08_RS18035 3632758 .. 3632772 -  -4.2  -3.04598   ATAAAGTTAGACATA               GAAAGG TTT CCTTAC               GCATTTTTGTTTGTG  47 22
SH08_RS18030 NONE
SH08_RS18025 NONE
SH08_RS18020 NONE
SH08_RS18015 NONE
SH08_RS18010 3629048 .. 3629062 -  -4.2  -3.53012   CGCGCGTCTGCGAAA               GCGG TTTATCC CCGC               TGGCGCGGGGAACTC  52 146
SH08_RS18000 NONE
        cysN NONE
SH08_RS17990 3623976 .. 3623993 -  -6.2  -3.15544   TGTTACTTTGACGAA             CCGGGC ATGGAA ACCCGG              TGGTGTCTCAGGATC  57 33
SH08_RS17985 3623515 .. 3623541 -  -4.4  -2.59191   GGATACCGCGACAAC         GCGGGCAAATGT ACC ACATTTGTCCAT         TGTTACGTATACCCA  45 112
        ftsB NONE
SH08_RS17975 NONE
        ispF NONE
        truD NONE
        surE NONE
         pcm 3619386 .. 3619400 -  -2.8   -4.7254   ATCCCCCAGGAAAAA               TTGGTT AAT AACCAG               TGACATAATTACCGT  64 133
        nlpD 3618169 .. 3618181 -  -3.3  -3.35996   TATTCTGACTCATAA                GGTGG CTC CTACC                CGTGATCCCTTGACG  47 73
SH08_RS17945 3617132 .. 3617155 - -14.6  -4.52857   ATTGTGCACAGAAAA          GGCCAGCCTC GCTT GAGACTGGCC           TTTCTGACAGATGCT 100 44
SH08_RS17915 3610780 .. 3610793 -  -3.1  -4.76193   AACGACAACATAAAA               TATGC CATC GCACA                TGCAGATTATCCGGG  71 314
SH08_RS17900 3607040 .. 3607065 - -15.5  -2.79968   GATTTAACTGCAAAT         TGCCGGACAGA TCTG CCTGTCCGGCA          TACTATTCATGAGGT 100 28
SH08_RS17865 3600553 .. 3600567 - -11.4  -3.57263   ACGCCCATCCCCAAA               CAGGCG TAA CGCCTG               CAAAACGGGCAAAGC  89 47
SH08_RS17855 NONE
SH08_RS17850 NONE
        hycD 3597107 .. 3597125 -  -3.7  -2.71263   AACTCTCTTTAATCA             CGCCGCC AGCAA GGAGACG             AACGCTAAAAATGCA  44 4
        hycE NONE
SH08_RS17835 NONE
SH08_RS17830 NONE
SH08_RS17825 NONE
        hycI 3593092 .. 3593116 - -12.1  -2.57136   GCACGAACCATGAAG          GCCCGATAAGC GCA GCGCATCGGGC          AATTTAGCATTTGGC  83 97
SH08_RS17805 3588826 .. 3588856 -  -7.7  -4.77157   GTAATGCAGGAAAAA      CGATGTCATCGACA CTAG TGACGATGACAT-G       TGATGACAATGTTTA  91 38
SH08_RS17800 3588064 .. 3588122 -  -6.7  -3.21099   TCCCGCCATCATGAA TTGCGTAACCCGC-CCTGCCGGACACGAC AGC GTCGCATCCGGCAGTCACAGGTCG-GCGA TACCGCCCGCTCCGT  59 96
SH08_RS17795 3585682 .. 3585713 -   -13  -3.04715   TACTGTGCCTAAAAT      GTCGGATGCGACGC TGGC GCGTCTTATCCGAC       CTACGGGGACGCATG  95 100
SH08_RS17780 3581022 .. 3581039 -  -5.5  -4.15044   CGCTTGCTGAATAAA             GTGCATC ATCT GATGCGC              CGTGACGATGCCATC  67 376
SH08_RS17740 3575062 .. 3575106 -    -5  -5.28778   AGGATTCAGAAAAAA GCTGATTAGCCAGAGGGAAGC TCAC GCCCCCCTCTTGTAAAT-AGC TACTGTACTCGCGCC  82 25
SH08_RS17735 3574444 .. 3574463 -    -8  -2.84098   CTGTTGAAGCAATTA            TACTGTAT GCTC ATACAGTA             TCAAGTGTTTTGTAG  61 26
SH08_RS17725 3573335 .. 3573349 -  -2.8  -2.56715   ATCGCCATTAATTCA               CTGATC AGT GATAAG               CTGTCAAACATGAGA  41 115
SH08_RS17720 3572940 .. 3572969 -  -8.5   -5.1925   TTACAACTTAAAAAA       GCAAAAGGGCCGC AGAT GCGACCCTTGTGT        ATCAAACAAGACGAT 100 193
        recX 3572317 .. 3572361 -  -7.3  -3.56675   CAAGCTAACGAAATA TC-GCCACCAGCTCCAGCGTGT CTTA AC-CGCCGG-GCTGGTAACTGA AAAGTGGGAATAAGA  66 79
SH08_RS17705 NONE
SH08_RS17700 NONE
SH08_RS17695 NONE
SH08_RS17690 3568613 .. 3568623 -  -5.4  -3.27029   CCGTATCAAGTAAGA                 GATG GTG CATC                 CGGGAGGATTACTCG  55 151
SH08_RS17685 3568472 .. 3568482 -  -5.4  -3.28487   CCATATCAAGTAAGA                 GATG GTG CATC                 CGGGAGGATTCGAAC  55 17
SH08_RS17680 3568198 .. 3568208 -  -5.4  -3.28487   CCATATCAATTAAGA                 GATG GTG CATC                 CGGGAGGATTACTCG  55 152
SH08_RS17675 3567804 .. 3567822 -    -6  -3.94933   GCAAGTCGAAAAATA             TGACGCTA CTT TAGCGTAA             TTGCTTGATTTTGTC  66 263
SH08_RS17665 3567205 .. 3567224 -  -3.6    -3.543   CGAGAAAAGCGATAA            CGCTTCACT CAC AGC-AAGCG            AACATCCACGGCGTC  51 14
SH08_RS17660 3566773 .. 3566801 -  -2.4  -2.79831   GTAATGGTGACCATA       TGTGCAGGC-CTA CAAT TAGTGCCACCACA        TCATGCCCTGAACGG  41 12
SH08_RS17655 3565004 .. 3565016 -  -2.6  -3.69283   GAAGCTATCTAACAA                CGGC ATTTA GCCA                CCTCCGGTAATTTTT  50 168
SH08_RS17650 3564441 .. 3564460 - -12.2  -3.50422   ACTAAGTACAACTAA            GCCAGTTC ATTT GAACTGGC             TTTTTTCAATTAATT  91 59
SH08_RS17575 3549660 .. 3549670 -  -8.2  -2.66272   CGGCACGCAAAGTTA                 GCCC GTC GGGC                 TGGATAAAAAATCTG  59 281
SH08_RS17565 3548325 .. 3548362 -  -8.4  -2.59039   AACGAGCTTGAGAAG   CGACGCCGGACG-CGCC CTAGC AGCGACATCCGGCCTCA   GTAATTAGATCAGGA  63 30
SH08_RS17550 3547111 .. 3547130 - -12.8  -3.29649   AGTGTAGCAGAGGAA            CGCGGCGC GTTA ACGCCGCG             GGGATGAGCACAGGT 100 41
SH08_RS17545 3546554 .. 3546575 -  -4.3  -3.07816   GCGCCAGTGAGTTAA           TGCGCCAGC ATTT ACTGACGCC            AATTCCCATTATCCA  48 63
SH08_RS17495 3535823 .. 3535846 -  -4.5  -2.63164   CCACATGTAAGCAAT          TTGCCCGCT TGGCAT AGCAGGCAT           TTTTTCCAGGTACTT  48 217
SH08_RS17485 3534771 .. 3534785 -  -2.9  -2.62098   TAAGTAAACCAACAT               GAAAA TCACT TTTTC               TTATATTATCGAAAA  41 45
SH08_RS17480 3533768 .. 3533791 -  -7.4  -3.77491   CACCAAATAAATCAA          GGGGTTACAT GAAA ACGTAGCCCC           TTTTTCTTTGGTAGT  70 148
SH08_RS17475 3533145 .. 3533162 -  -4.2  -3.45027   ACCGCTCATCAAAGA             CATCAT GATGAA ATGATG              ATATTCCGCATAAGA  52 204
SH08_RS17465 3528392 .. 3528407 - -10.4  -3.92324   CCTGGTAACATGAAA              GCCCAC AGAT GTGGGC               TTTTTCGTTGATGGT  89 40
SH08_RS17435 3522450 .. 3522467 -  -5.5  -4.06904   GTATCTAATTACAAA             GTGACAG AGAG CCGCCAC              GCCAGCGCGGCCAGA  63 1
SH08_RS17430 3521918 .. 3521942 -  -5.5  -3.84406   TCCCTACCATAACAA          CCCTGATTGCC TCC GGCGGTCGGGG          GTTTCTTTTTTCTCC  61 199
SH08_RS17385 3515447 .. 3515457 -  -2.6   -3.3095   AGACATCCGTGACAA                 TTTT GCG AAAA                 TTAAGGAGATGTTAT  46 357
SH08_RS17380 NONE
SH08_RS17375 3511468 .. 3511492 -  -7.2  -2.87325   ATTTTTTACAACAAT          GGCCTTTC TTATGGCTG GAAAGGCC          TGATTTGTTTGTATT  59 160
SH08_RS17355 3507682 .. 3507709 - -12.8   -2.8733   TGTCGGATAAAATAT        TTATCAGCCCAG CTCT CTGGGCTGATAT         TTCTAAAAGATCGCA  91 236
SH08_RS17340 NONE
SH08_RS17335 3504254 .. 3504270 - -12.3  -5.10077   AAAGACGTTAAAAAA              GGTGCTC AAT GAGCACC              TTTTTTCTGTCTGTT 100 39
SH08_RS17315 NONE
SH08_RS17310 3500343 .. 3500368 - -14.7  -4.45544   GCGGAGTAACGAAAA         CGGCCCGGCAT TCGC ATGCAGGGCCG          TGAATTATTACGAAA 100 48
SH08_RS17295 3496485 .. 3496517 -  -9.2  -4.63218   CTTGTGTGAATAAAA     CAACCGGACCCCATC GAGG AACGGAGTCCGG-TG      TCATATTAAAAGCCC 100 218
SH08_RS17290 NONE
        rimM NONE
        trmD NONE
SH08_RS17275 3494407 .. 3494428 - -11.5  -5.51046   CAAACAGATAAAAAA           GGGCCAGCC AATT GGCCAGCCC            TTCTTAACAGGATGT 100 56
SH08_RS17250 NONE
        tyrA 3489188 .. 3489217 - -15.1  -4.28361   CCAACCTGATGAAAA       GGTGCCGGATGAT GTGA ATCATCCGGCACT        GGATTATTACTGGCG 100 32
        rluD NONE
SH08_RS17215 3484492 .. 3484506 -  -5.7  -3.83998   CTACTGGAGATTAAA               TGAGG TCATC CCTCA               ATTATTCAAGGTTAT  63 98
SH08_RS17210 3481849 .. 3481866 - -12.7  -5.04597   ACTTATAGACAAAAA             CGAGCCC CGAA GGGCTCG              TTTTATCATTTACTG 100 35
SH08_RS17205 3479858 .. 3479871 -  -2.3  -2.72471   TTTTCATCAGACAAT               CTGTG TGAG CACTG                CAAAGTACGCTTCTT  40 34
SH08_RS17200 3479586 .. 3479597 -  -4.4  -4.09503   AAATATATCAAACAA                GACT TAAC AGTC                 TGTTTTGAGATATTG  61 73
SH08_RS17195 3476468 .. 3476481 -  -2.4  -2.78679   GGCCGCCAGGCAAAT               TCTG TTTTAT CAGA                CCGCTTCTGCGTTCT  41 84
SH08_RS17190 NONE
SH08_RS17185 NONE
SH08_RS17180 3474365 .. 3474381 -  -9.4  -3.51032   ATCCTGTAATCACAA              CCCCGT CCTGT ACGGGG              TTTGTTTTTTGGAGG  76 368
SH08_RS17150 NONE
SH08_RS17145 3467733 .. 3467760 - -13.4   -3.5394   AAATTTGCGGGGAAA        TGCCGGATGGCA GAGT TGCCACCCGGCT         GATTTATCAGGCTTT 100 32
SH08_RS17135 3466296 .. 3466319 - -16.8  -5.65513   TATTAACGAAAAAAA          GCGGAAGAGG TCGC CCTCTTCCGC           TTAGTAACTTGCTAC 100 48
SH08_RS17125 3464689 .. 3464708 -  -7.1  -3.80625   TGTCGACAAGTTAAA            TGCCGGG TTTAAT CCCGACA             TTATTTTTATCCAGC  70 32
SH08_RS17110 3462112 .. 3462138 -  -6.6  -3.62775   ACCATGCTCCAACAA         GAAATAGACGAA TAT TACGCCCATTTC         CGCGTCTCAAATAAT  63 190
SH08_RS17100 NONE
SH08_RS17095 NONE
SH08_RS17090 NONE
        rseB NONE
SH08_RS17080 3457588 .. 3457605 - -11.3  -4.32607   GCAAAATGCAACAAA             GCCAGTG AAAT CACTGGC              TCGCGTCTTCCGAAG 100 18
SH08_RS17075 3455565 .. 3455586 -  -5.1  -2.68015   GGCAATCACCAGAAT           CAGGGCAAA CATA TTCGCCATG            CCAACTCCTAAGGGT  49 40
SH08_RS17070 3454566 .. 3454598 - -21.5  -4.07877   TTATCTCATAAATAA      TTCACGTTGTCGCCA TAA CGGCGACAACGTGAA      CGAAGATGGCTATTA 100 38
         rnc NONE
SH08_RS17060 NONE
        recO NONE
SH08_RS17050 3451262 .. 3451277 -  -2.6  -2.71924   TATCCGTGCCTAAAC              CTAATA TTGC CATTAG               CCACGCGCTTCCAGC  41 22
        acpS 3450833 .. 3450869 - -11.6  -4.83759   AATTAAAGTTAAAAA    GTAAAACCCCCGTTCC TTACC AGTTCGGGGGTTTTAC    TTTTTAAAGAGAACG 100 50
SH08_RS17035 NONE
SH08_RS17030 3450344 .. 3450373 - -15.1  -3.78022   TTTATAGTTATTAAA       GGTGCGTCCGACTG GTT CA-CCGGACGCACC       TTAAGTACGTTTCCT 100 45
SH08_RS17015 NONE
SH08_RS17010 3447231 .. 3447247 -  -5.1  -3.28712   CCTCGCTGCGTACAA              TATGGGC TAT GCGCATA              TGCTGGATGCCCGCG  54 408
SH08_RS17000 3441854 .. 3441871 -  -8.4   -5.4492   TACAGACACAAAAAA             GCTCCC GGAGTT GGGAGC              TTATGATAGTGGTTG 100 86
SH08_RS16995 3439921 .. 3439935 -  -2.8  -5.01553   AACTGACAAATAAAA               TAGCCT GAT AGGATA               GGCTGTTAGCATTAT  70 37
SH08_RS16990 NONE
SH08_RS16985 NONE
SH08_RS16980 3437262 .. 3437276 -    -5   -4.3534   CGTGAAGCAGGAAAA               CATTCA TTA CGAATG               CTTTGGCCCGCATAA  67 95
SH08_RS16970 3434352 .. 3434369 - -11.3  -4.00066   GCGATAACGTAGAAA             GGCTTCC CGAA GGAAGCC              TTGATGATCATAAAC 100 186
SH08_RS16960 3429722 .. 3429735 -  -2.5  -3.53012   CGCGTGCCGCTCAAA               TATTA CAGT TAATA                GGGTTTAGTGAACGC  48 30
SH08_RS16955 NONE
SH08_RS16950 NONE
SH08_RS16945 3426064 .. 3426099 -  -3.8  -3.30452   TAACAATACGATTAA    TTTTCATCCCTGCCGC ACCC GCGCCAGGGGCGTTAA     GGTTTAGCGTTTCGC  49 29
SH08_RS16940 NONE
SH08_RS16935 3424051 .. 3424082 - -14.4  -3.44848   CGGCGTTAGGAAAGA      TGCCGGATGCGGCG TGAA CGCCTTATCCGGCA       TTTAATAAATTACAG 100 35
SH08_RS16900 3418276 .. 3418295 -  -3.6  -3.23855   TGTTGCAAAAATAAT            GCGTAA TTATGCCG TTACGC             TTGCCAAACGTTCCT  49 12
SH08_RS16895 3416975 .. 3416988 -  -2.4  -4.13282   AGCAGATCCGCAAAA               TGCT CGAATC AGCA                TGAGGGAACAACTTT  55 20
SH08_RS16875 3412827 .. 3412841 -  -7.8  -3.30124   CTGTAGGCCTGATAA               GACGCA TTA CGCGTC               GCATCAGGCAACGGC  66 43
SH08_RS16870 3411820 .. 3411843 -  -2.4  -2.91593   CATTGCTCTATAAAC          TCCGTACATC ACTC AATGCAAGGA           ATCAGGCTACCGGCT  42 101
SH08_RS16865 NONE
SH08_RS16860 NONE
        iscA 3409797 .. 3409823 -  -8.7   -4.6951   ATCAGGTAAAACAAA        CCCCACGCGCAG GCGA CCACG-GTGGGG         TTATCGGTATGCGCA 100 41
        hscB 3409207 .. 3409218 -  -2.2  -2.78867   CTAATTTGTAATAAG                GCCA TGTT TAGC                 TTCCAGAAATTAAAA  41 35
        hscA NONE
SH08_RS16840 NONE
SH08_RS16835 3406658 .. 3406677 - -12.8  -4.07568   TCCTTCTTTGTAAAA            GGGCCGCC AGTT GGCAGCCC             CAGGATTTTTCCGCT 100 160
SH08_RS16830 3405322 .. 3405333 -  -7.2  -3.30124   TTGTAGGCCGGATAA                GGCG TTTA CGCC                 GCATCCGGCATATTA  64 43
SH08_RS16825 3404345 .. 3404359 - -11.4  -4.10744   CGAGGTAAATAATAA               CCGGAG TCT CTCCGG               CGACAATTTACTGGT 100 99
SH08_RS16815 NONE
SH08_RS16810 3395252 .. 3395265 -  -2.5  -4.09511   AACATTTTTTTAAAA               TAAAA TGAG TTTTA                GCAACAATCAGGGAC  57 49
SH08_RS16805 3394617 .. 3394648 -  -8.7  -5.04249   GGTTGAAAAAAGAAA     CG-CCCCGG-TGAGC GGCT GCTCGTCCGGGGGCG      CTGCATTGTACAAAT 100 86
SH08_RS16800 3393363 .. 3393400 -   -18  -4.42653   ACTTCATTCATAAAA   CATTACGCCACGG-TAC ATAAA GTAACCGTGGCGTAATG   GCTATCAGACCGCTT 100 30
SH08_RS16795 NONE
SH08_RS16790 3390933 .. 3390953 - -13.3  -3.00298   GGGTTCAATCATACA            CGGGAAGCG AGG CGCTTCCCA            TCACGTTATTATTTT 100 34
        hisS NONE
SH08_RS16780 NONE
SH08_RS16775 3387699 .. 3387730 - -13.8  -3.90048   TCGTTGTTAAAAACA      GGAAAACGGCCCCT GTCC AGGAGCCGTTTTCA       AAGTGAACGACAGAG 100 45
SH08_RS16770 NONE
SH08_RS16765 3385801 .. 3385813 -  -7.7   -2.9296   GAAATGCTAACCACA                CGTCT GGA AGACG                GCTGGATAGAAAGTG  58 87
SH08_RS16755 3382851 .. 3382873 - -14.9  -4.33674   AACAGATAATATAAA           TCGCCCGAC ATGAA GTCGGGCGA           AGAGAATCAGGAGCC 100 32
        guaA 3381186 .. 3381205 - -12.2  -5.47159   CTTGAAGATAAAAAA            CCCTCTGT AGTA ACAGAGGG             TTTTGTTCATTCATA 100 54
SH08_RS16730 3379342 .. 3379355 -  -3.9  -3.34629   ATATGAAAGTACCAA               TTGAT ATAT ATCAA                ACAAAATAACCCTGA  49 66
SH08_RS16725 3376935 .. 3376969 -  -9.2  -3.02043   AATCGCCGCTTAATA     CTTTGCGGGCCGAC GAGAAAT GTCGGCCCGCATTA     TTCAGGCACTTTCGC  71 27
         upp 3370485 .. 3370503 -   -11  -5.81412   TTTACTCAAAAAAAA             GCCGACTC TTA AAGTCGGC             TTTAATTATTTTTAT 100 44
SH08_RS16695 3369103 .. 3369153 -  -2.4  -2.72649   AGTTTACCACAGAAT CCCATGATGTTTGAACCGGGCAGC AAC ACTGCCCGGTCGGTACATTATTTG TCTGTTATATCCGCG  40 19
SH08_RS16690 3367931 .. 3367943 -  -2.6  -4.86731   CCTGCTGAAAGAAAA                CGGC GTGGA GCCA                GAAGTGGTGCTCTAC  68 433
SH08_RS16675 3365063 .. 3365092 - -16.5  -4.62872   AGGAACCCTGAAAAA       TCAGCCCGGCGAA ACAG TTCGTCGGGCTGA        AGATTATTCTTGCGC 100 29
SH08_RS16600 NONE
SH08_RS16595 3348080 .. 3348099 - -11.4  -5.34555   TCATATCAGAAAAAA            GGGCCGGA TGAT TCCAGCCC             TGTATTTTTACTTGC 100 33
SH08_RS16585 3347169 .. 3347188 -  -2.8  -2.75074   TGCACGGCAAGATGA            TGAACAGA AAAA TCAGTCCA             GCTGTACACCCAGGC  42 18
SH08_RS16580 3346155 .. 3346171 -  -2.3  -3.75153   GCCCCGGAAGTTAAA              TGCTTTT ACC AAAAGTA              TTGCATTGTGCCGGA  51 4
SH08_RS16575 3344035 .. 3344049 -  -4.2  -2.71055   TTGAACAACAAAATG               GTCATG TTT CATGGC               GAACTCCTTAACTGA  45 96
SH08_RS16570 3343268 .. 3343320 - -14.8  -2.57931   CGTAGGCCGGATAAG GCGTTAACGCCGCATCCGGCAATG GTGAA CGATGCCTGATGCGACGCTCACGC GTCTTATCAGGCCAG 100 53
SH08_RS16535 NONE
SH08_RS16530 NONE
SH08_RS16525 3331596 .. 3331618 -  -4.1  -3.74077   GTTCAGAGATGGAAA           TTACCCTGC AAGCG GCAGAGAAA           TTAGCAGGAGAAGGT  56 417
SH08_RS16510 3326329 .. 3326357 - -12.6  -3.66378   TATATTGCAGCTAAA       CTGCTTACCCTGA ATAT TCAGGGTAAGC-G        TGAGAGTTAAAAAAA 100 42
SH08_RS16505 NONE
SH08_RS16500 NONE
SH08_RS16495 NONE
SH08_RS16490 NONE
SH08_RS16485 NONE
SH08_RS16480 3322400 .. 3322425 -    -9  -3.15182   ATGAAAAAGGAGAGA         GCGTGACGCC CGAATC GACGTCACAC          AGGGTGATTACAGGT  69 33
SH08_RS16475 NONE
SH08_RS16470 3320629 .. 3320645 -  -8.7  -3.55444   CTGTTACTCCTTAAA              CAATGCG AAA CGCATCG              ACTAATACACAGCGA  73 4
SH08_RS16465 NONE
SH08_RS16460 3318432 .. 3318477 -    -9  -3.53811   CGGATGCGGCGTAAA CGCCTTATCCGCCCTACATG TGCAAT CCCGTAGGCTGGATAAGACG CGGCAAGCGTCGCAT  73 148
SH08_RS16455 NONE
        eutA 3315749 .. 3315766 -  -4.1  -2.58544   CTTTAGTTTCATAAG             TCGTTCC CTCA GGAAGGA              AATGCGAGTGATTTC  45 16
SH08_RS16445 NONE
SH08_RS16440 3313459 .. 3313475 -  -2.1  -3.89336   CGAATCAAATCTAAA              GCTGGCA TGA TGCCTCC              TTATCGGGTCATGTT  51 26
SH08_RS16435 NONE
SH08_RS16430 NONE
SH08_RS16425 3310954 .. 3310974 -  -6.7   -3.6682   GTCGAGCGACGGAAA            GCGATGGCC TAC GGCGAGCGC            GAGCGCAATTTCCAG  63 247
SH08_RS16410 NONE
SH08_RS16405 NONE
SH08_RS16400 3307633 .. 3307651 - -10.3  -4.20868   TCCTGAAAATAATAA             TGCCACG CAATC CGTGGCA             TTGTTGAGCGCTATT  91 81
SH08_RS16395 3306479 .. 3306506 -  -8.4   -5.2204   CAGAAGTAATAAAAA        GGCCAGTCAGTA ATGT TACTGGCTGGTC         TGAGAGTGCTGACAA 100 231
SH08_RS16375 3301714 .. 3301726 -  -5.5  -3.06696   CTCCTTGTTAATACA                GAGCG TTA CACTC                CATTCCCTCTGAAAA  52 117
SH08_RS16370 3300862 .. 3300885 -   -11  -3.93038   TAGTTCAAGACGAAA          TCCTCCCCAC AAAT GCAGGGAGGA           AACAGAGGTGAATCA  90 38
SH08_RS16365 NONE
SH08_RS16360 NONE
        cysW NONE
SH08_RS16350 3296734 .. 3296761 -  -9.1  -4.72272   CCTTGCCATTAAAAA        GCCCGGA-TCGC GGGAA GCGCCTCCGGGC        GTTTAACATTCACTC 100 47
        cysM 3295586 .. 3295644 -  -2.3  -5.06103   ACAACTGTTAAAAAA GTGCGCTTTGTTTATGCCGGATGCGGCG TAAA CGCCTTATCCGGCCTACA-AAATCGTGC TAATTCAATATATTG  68 119
        pdxK 3293429 .. 3293446 - -12.7  -4.65895   TGCCGCAGTGAAAAA             TGGCGCC CATC GGCGCCA              TTTTTTTATGCTTCC 100 31
SH08_RS16300 3287265 .. 3287281 - -10.8  -4.67904   CATCAATGCTAAAAA              CCCCCG ACAAG CGGGGG              TTCGAAGAGGAGTTA 100 57
        ligA NONE
SH08_RS16290 3284971 .. 3285004 -    -3  -3.12505   ACGCCAGACCGAACA     GTTACAGGCGCAGC AGGAAA GCAGCGCCGATAAA      GCTTAAAGCGGACGC  46 28
SH08_RS16280 3282677 .. 3282701 -  -7.1  -2.84999   ATCAAACCTATTACA          CTGGCGACA ACGGCTA TGTCGCCGG          CTGGGTTGCAGGTTA  54 320
SH08_RS16270 NONE
SH08_RS16265 3279764 .. 3279786 - -11.3   -4.4648   ACCTTTATCATAAAA           GCAGCTCTG AAGAG CAGAGCCGC           GAATCCTTTTAATGA 100 34
SH08_RS16260 3279563 .. 3279579 -  -2.3  -3.48772   AAGTGCTCCATATAA              TAAATAC ATC GTATTAA              ATTATCATGGCATAA  47 30
SH08_RS16255 3278561 .. 3278575 -  -9.2  -5.17576   CACCAATGTAAAAAA               GCGCCC TAA AGGCGC               TTTTTTGCTATCTGC 100 109
        gltX 3276280 .. 3276302 -   -12  -5.73978   AGCATAAATAAAAAA           CGGCAGGATA TTA TCTCCTGCCG           TTTATCTTTTTACAC 100 46
SH08_RS16215 3275204 .. 3275218 -  -4.3  -2.50816   CGTTTACGTACCAAG               TTTGC TGGGT GCAAA               ATTTGGTGGAGCTAA  45 29
SH08_RS16210 3275078 .. 3275097 - -11.4  -5.43414   AGCAGAGACAAAAAA            CCCCCGCT TTGC AGCGAGGG             TTGGAAATTTGGTGG 100 35
SH08_RS16205 3272533 .. 3272559 -  -3.6  -5.34365   GGAGAATAACAAAAA         TGGTCATCTGGA GCT TACAGGTGGCCA         TTCGTGGGACAGTAT  80 175
SH08_RS16190 3268418 .. 3268449 -   -13   -2.6627   CCAATGGAGCACAAT      GCCTGATGCGACGC TAGT GCGTCTTATCAGGC       CTACAAACCGGCTCT  91 110
         glk 3265490 .. 3265513 - -11.8  -2.81922   TATGATTTAAAAGAT          TATCGGGAGA GTTA CCTCCCGATA           TAAAAGGAAGGATTT  83 39
SH08_RS16165 NONE
SH08_RS16160 NONE
SH08_RS16155 NONE
SH08_RS16150 3261551 .. 3261566 -  -3.3   -3.0644   ATTGAATCGTTAACA              TAACC GCTCCG GGTTA               ATCAGGAGATCATCT  44 35
SH08_RS16145 3258704 .. 3258715 -  -5.8  -3.02144   GTAGCGTGGTGAATA                TGCC GCCG GGCA                 ATTCGCAGCCGCGCG  53 366
SH08_RS16125 3254081 .. 3254100 - -13.6   -4.8622   CTGTGCAATGAAAAA            CAGGAGCC ATCA GGCTCCTG             TTTGCATTTCTGACG 100 48
SH08_RS16115 NONE
SH08_RS16110 3251885 .. 3251895 -  -5.4  -5.15381   AAGAGACTGAAAAAA                 CATC AGC GATG                 ACGACCACACACTCT  83 154
SH08_RS16100 3250742 .. 3250778 - -11.9  -3.92542   GCGAGCGCCAAATAA    TTTTATGACCACAAC CTGTCGT ATTGTGGTCATAAAA    AATTGTCGGCTGGAG 100 80
SH08_RS16095 3249045 .. 3249063 -  -4.4  -2.94161   GAAATTTTTATAAAT             TGGGAGCC AGA AGCCCCCG             TTAATATCAGATGGC  47 32
SH08_RS16090 3247270 .. 3247310 -  -3.1  -3.30441   TAGTATTTCCGATAA  GGGTCCCCTCACCATCGCA TAA TGAGTTGGCAAGAGGAGAC  GATGTCAGTATTTAA  47 37
SH08_RS16085 3246255 .. 3246279 -  -6.5   -5.0133   TATGCCTTGAAAAAA         GCCGAAG-GT GAAAAG ACACTTCGGC          ATTTATGTAAAATCA  84 54
SH08_RS16080 3244921 .. 3244935 -  -6.4  -4.09519   ATCAGTTAGAAATAA               CACCTG TTT CAGATG               ACAGTAAGCCTGAAA  68 179
SH08_RS16065 NONE
        emrB 3237480 .. 3237527 -  -7.1  -3.22884   TCAGTAAGTTACCAA CAGATGCACGGTTTCAGCGCAG AACAA CTGCG-TAATACCACTCATCTG GTGTGGGCGACGGGA  57 202
SH08_RS16045 3233626 .. 3233659 -  -7.4  -3.36289   CACCATTCCAATCAA     TCCCCTGCTG-CTTC AAGTA GATGTCTGCAGGGGA     CACCATCCTTGTGTT  64 126
SH08_RS22975 NONE
SH08_RS16000 NONE
SH08_RS15995 NONE
SH08_RS15990 NONE
SH08_RS15985 3227979 .. 3227993 -  -7.1  -2.86747   GATGCAGCAGAAGCA               CAGCG CCAGT CGCTG               ATTGATACTGCAATG  54 174
SH08_RS15945 3221282 .. 3221301 -  -7.9  -5.68489   GATAACAACAAAAAA            GGTGAGT TTTGCG ACTCACC             TTTTTTATTTGTTTC 100 41
SH08_RS15930 3217671 .. 3217697 - -20.2  -5.26907   GAAGAGAAAAGAAAA         CGCCCCTGCCAG CAA CTGACAGGGGCG         TACGTACCCGAGAGG 100 43
        fadI NONE
        fadJ 3214012 .. 3214035 -  -4.6  -2.90571   AATGGCGTAAGTATA          GTCAATATGC GTTT ACATTTTGAC           CAACACTCCGCCATT  50 70
SH08_RS15915 3213348 .. 3213380 - -14.4  -3.21099   CTGCCTGATGAGCAA      TTATGCCCAATGAA TCTAC CTCATTGGGCATAA      TTTGGAACTCATCAG 100 37
SH08_RS15910 3212117 .. 3212140 - -13.2  -3.42684   AAATCCATTTAAATA          CCCCATAGCA GTGT CGCTATGGGG           GTATGCCTTACAGGT 100 33
SH08_RS15905 NONE
SH08_RS15900 NONE
SH08_RS15895 NONE
SH08_RS15890 NONE
SH08_RS15885 NONE
SH08_RS15880 3205873 .. 3205884 -  -3.6  -3.45027   AGCCGTTATTAAATA                CCGA AGGT CCGG                 TGAAATATGTTCGCC  51 434
SH08_RS15870 NONE
SH08_RS15865 NONE
        mepA NONE
SH08_RS15855 NONE
SH08_RS15850 NONE
SH08_RS15845 3200910 .. 3200924 -  -7.1  -3.30124   GTGTAGGCCTGATAA               GACGC GATAA GCGTC               GCATCAGGCATGCTG  64 57
SH08_RS15835 3197353 .. 3197370 - -11.3  -4.64598   CAATGATGTGAAAAA             GGGAACC ATCA GGTTCCC              TTTTGCGTTAGTGCC 100 105
SH08_RS15830 3195550 .. 3195561 -  -4.4  -2.83522   AGCTGGTGACCAAAC                TTGC GGCG GCAA                 CGGGGGAACCCAGCA  46 471
SH08_RS15820 3193740 .. 3193767 -  -7.7  -4.04579   TCCAGAAATAGCAAA        GCTCCCTGCCA ATGTTA CAGCAGAGAGC         ATGAAGAAGAGATTA  74 38
SH08_RS15815 3192704 .. 3192721 -  -4.1  -2.62184   GCTGGTCGGACATTA             GTACAGA TACT CCTGCAC              CAGTTTCTCGGCGAT  45 5
        truA NONE
SH08_RS15805 3191123 .. 3191135 -  -3.3  -5.24531   ACTTTGGATAAAAAA                GTGGT CGA ACCGC                GGAGTTACTTTTTAT  75 37
SH08_RS15800 3190044 .. 3190066 -   -17  -4.46656   GTGAGAATAGCAAAA           GGGCAGAGCC AGT GGCCCTGCCC           TTATCAGTTATCAGG 100 36
SH08_RS15795 NONE
SH08_RS15790 3187931 .. 3187956 -  -9.8   -5.1356   GCGCATCAATAAAAA         TGGCGCTGAA AAAATA TTCAACGCCA          TCGACTTTTTATGCC 100 156
SH08_RS15785 3187339 .. 3187355 -  -2.9  -2.64243   CCACATCTCAGAGCA              CTTACGC TCT GGGCAAG              AAACTTGACGAGCTT  41 10
SH08_RS15780 3185755 .. 3185773 - -12.4  -2.53263   GGGAGTTGCAAGTCA             GGGTGCCA GAC CGGCACCC             TCAGCGAAGGCATCA  86 38
SH08_RS15775 3185095 .. 3185113 - -13.2  -4.07687   ATCGCGGTTGCAAAA             TTGCCCTG AAA CAGGGCAA             CAGCGGAGTTATGCG 100 34
SH08_RS15770 3183923 .. 3183933 -    -4   -4.3739   TATCGTGCCATAAAA                 TTGA CCA TCAA                 GGCAAAATATCCCGC  63 166
SH08_RS15765 NONE
SH08_RS15760 NONE
SH08_RS15755 NONE
SH08_RS15750 3180771 .. 3180794 - -12.4  -3.73042   TTCCCCATGAAAATA          CTCCGGCAGC GTTA GCCACCGGAG           AGGAAATTATTTCAG 100 32
SH08_RS15745 3179190 .. 3179230 -  -6.8  -3.93583   GAATTTACCCATAAA CTCTGCGCTC-GCTGGGAA GAAA TTGCCTGCCGGGCGCAAAG  TGACAAAACGCGAGT  68 509
SH08_RS15725 NONE
SH08_RS15720 NONE
SH08_RS15715 3175678 .. 3175691 -  -9.5  -3.17553   CTAAAAATGTTAAGA               GCCGC AATT GCGGC                TCTTTTTTCATTCTG  72 33
SH08_RS15695 3170234 .. 3170249 -  -3.3  -3.45707   TAAAGATTCAAAAAT              TTGTG CAAATT CACAA               CTCAGCGGGACAACG  49 42
SH08_RS15690 3169698 .. 3169716 -    -6  -5.76949   TACGGTGAAAAAAAA             GAAGGC TGAGTAT GCCTTC             TTTTATATGCGTAAT 100 51
SH08_RS15685 NONE
SH08_RS15680 3168467 .. 3168484 -  -9.8  -5.24129   TTCTGCCATAAAAAA             GCCCCG ACGAGA CGGGGC              TAAATCATGATCAGG 100 45
SH08_RS15675 3166222 .. 3166232 -  -3.2  -5.09225   AGGCTATTGAAAAAA                 TCGC TCA GCAA                 AAACTGGTCGATATG  77 378
SH08_RS15660 3162693 .. 3162722 -   -15  -5.86061   TTTTACTAAAAAAAA       GCCGCTGGGGTT TAAAAC ACCCCCAGCGGC        TCGTTTTTTACACTA 100 71
SH08_RS15655 NONE
SH08_RS15650 NONE
SH08_RS15645 NONE
SH08_RS15640 NONE
SH08_RS15635 NONE
SH08_RS15630 NONE
SH08_RS15625 NONE
SH08_RS15620 NONE
SH08_RS15615 NONE
SH08_RS15610 NONE
SH08_RS15605 3150130 .. 3150142 -  -5.5  -4.08216   TTATTCCTTGTAAAA                GTCCC GTC AGGAC                CGGATTTTCAACGAA  65 153
SH08_RS15600 NONE
SH08_RS15595 3147070 .. 3147088 - -11.7  -4.82901   TCTTTTTCAGAAAAA             CCGCCGA GCATG TCGGCGG             CTTTCTGACTTACAA 100 50
SH08_RS15580 3144647 .. 3144662 -  -4.7  -3.28001   CATTGTTAAATGCAA              TACCG TATATT CGGTA               TGTAACAGCGATATC  53 138
SH08_RS15565 3141006 .. 3141039 - -22.7  -3.35073   ATCATTGTTAATTAA     TTCGACCAGTCAGCA AATA TGCTGACTGGTCGAA      CATAGTTTGCTAAAC 100 46
SH08_RS15550 NONE
SH08_RS15545 3137743 .. 3137773 - -13.4  -2.85847   AAGCCTCACATTATA       CGGGGTACTACA AAAAAAA TGCAGTACCCCG       GTGTAGGGAGGTTTT  93 39
SH08_RS15540 NONE
SH08_RS15535 NONE
SH08_RS15530 NONE
SH08_RS15525 NONE
SH08_RS15520 NONE
SH08_RS15515 3130653 .. 3130667 -  -5.8  -3.23045   ATTTACAGATTAACA               GATAAA CTC TTTATC               AACGGCAATGGAATG  55 71
SH08_RS15510 3130167 .. 3130181 -  -2.1  -3.88985   AAAACGCTTCATAAA               CTTGC GCTAA GCAAA               GCCTATGCCTTGCTC  54 181
SH08_RS15470 3122051 .. 3122072 - -13.1  -2.93073   CTTCTGTAACAATGA           TGACAGCCA TTAC TGGCTGTCA            GATTGAAAATTTAGT  95 36
SH08_RS15460 3120768 .. 3120790 - -11.2  -3.38832   TAGTAAGAAACTGAA           TGGCGCGACA GAA TGCCGCGCCG           GAAGGGATCAGAAAC  81 33
SH08_RS15455 3119477 .. 3119493 -  -7.9  -3.72576   TGCCGGTGCAGTAAA              CCGGCAC AGA GTGGCGG              AATCAGACAGATAAG  70 28
SH08_RS15450 NONE
SH08_RS15445 3117237 .. 3117270 -  -8.1  -3.21772   AAGCTCCTTAGAATA     TGTGGGCGTTACCGT TGTC ACAGCAACGCCCGGA      GTGATTAGTGGCTGT  63 30
SH08_RS15440 NONE
SH08_RS15435 3115072 .. 3115104 -  -7.7  -3.43553   ATAACCACTAATTAA      CACAGGCCCACAG CCGATCC CCATGGGCCTTTG      ATATCAATAACTACC  68 29
        glpT NONE
        glpQ 3106967 .. 3106992 - -15.5  -2.86743   AAATTTGATATGAGA         CAGGATGGCGC ATGA ACGCCATCCTG          CAGTAACATTACTCT 100 34
SH08_RS15390 3105785 .. 3105810 -  -7.6  -3.53811   TTCAGCCGGGGGAAA         TTTTGCCCTG TTGTTG CCGGGCAAAA          GGCGATATTGAAATC  68 103
SH08_RS15365 3097440 .. 3097451 -  -7.2  -3.30124   CCGTAGGCCGGATAA                GGCG TTTA CGCC                 GCATCCGGCAACCGT  64 57
SH08_RS15355 3093786 .. 3093807 -  -8.7  -4.55023   CCTAATACGACAAAA           GCCCAGACT TTGC AGCCTGGAC            TTTTCAATTCAAACA  93 77
SH08_RS15350 NONE
SH08_RS15345 3091367 .. 3091389 -  -6.3  -2.53894   ATCAGCATTAGCAAG          CCCTGTTCCC ACAA GAG-ACAGGG           ACAAGCACGCTGCTA  53 38
SH08_RS15340 NONE
SH08_RS15335 NONE
SH08_RS15330 NONE
SH08_RS15325 3084360 .. 3084404 - -13.2   -3.3482   GAACGGTTGAATTAA TCAATAAAAACACCCGATAGC GAAA GTTATCGGGTGTTTTC-TTGA ACATCGACGGCGAAG 100 54
SH08_RS15290 3074030 .. 3074082 - -12.7  -2.59298   TAGGCCAGATAAGAC GCGTCAGCGTCGCATCTGGCATT TGCACTG AATGCCGGATGCGGCGTAAACGC CTTATCCGTCCTACG  88 36
SH08_RS15275 NONE
SH08_RS15270 3070081 .. 3070092 -    -3    -3.965   GGTTAAAATCAATAA                CTTA TTCT TAAG                 TATTTGACAGCACTG  56 7
SH08_RS15265 3068677 .. 3068690 -  -9.5  -5.43514   AAAACAATGAAAAAA               GGGCC CGCA GGCCC                TTTGTTCGATATCAA 100 47
SH08_RS15260 3067493 .. 3067506 -  -2.3  -2.70932   CTCCCTGGTTAAGGA               TAGCC TTTA GGCTG                CCCGGTCACCATCAC  40 64
SH08_RS15255 NONE
SH08_RS15250 NONE
SH08_RS15245 3063997 .. 3064027 -    -9  -2.79183   GGGATTTTTAGCATA       TTGACCTGACGG CAGCAGT CCGCCAGGTCAG       CGTCGTAATATTATG  67 36
SH08_RS15240 3062136 .. 3062168 - -26.5  -2.82516   CGTCTTATCAGCATA      CGCCACATCCGGCAT ACC ATGCCGGATGTGGCG      TATCATTACAACGCA 100 31
SH08_RS15225 NONE
SH08_RS15220 NONE
SH08_RS15215 NONE
        napG NONE
        napH NONE
        napB NONE
SH08_RS15195 3054715 .. 3054725 -    -4  -3.09193   AGCATACCCACGCAA                 TAAC CCT GTTA                 AAAACCTGGCTCGAC  49 23
SH08_RS15190 NONE
SH08_RS15185 3053425 .. 3053451 -  -3.1  -2.59883   AAAATCAGTAATCCA        GCGTTATTGAAT GCTG ATTCG-TAACGC         TGCCGCCGTCGCAAA  42 2
SH08_RS15180 NONE
SH08_RS15175 NONE
SH08_RS15170 NONE
SH08_RS15165 NONE
SH08_RS15160 3049471 .. 3049483 -  -3.3  -5.07486   CACGCCCAATAAAAA                CCTCA TTG TGCGG                CCTCCTTACTGTATT  71 15
SH08_RS15155 3048217 .. 3048243 -    -8  -5.18726   GGGGCACAATAAAAA         TAGCCCGATG GATTTAT CATCGGGCTG         AGATTTATGACAAAC  95 206
SH08_RS15145 3047272 .. 3047285 -  -2.4  -2.73701   TCCTATGAAATTAAT               TGCT GTTAAA AGCA                TTGGGTACAGAAAAT  41 17
SH08_RS15140 3046084 .. 3046095 -  -2.2   -2.7186   AAATGCCTTGAATCA                GCCT ATTT AGAC                 CGTTTCTTCGCCATT  40 61
SH08_RS15135 3043371 .. 3043387 -    -8   -5.4756   AATCCCAAGAAAAAA              CCAACC CTTAC GGTTGG              TTTTTTTATATCTGC 100 94
SH08_RS15115 3039890 .. 3039905 - -11.8  -5.06103   ATAAGTTGTAAAAAA              CCCCGC TCCG GCGGGG               TTTTTTGTATCTGCA 100 126
SH08_RS15100 NONE
SH08_RS15095 3035603 .. 3035620 -  -7.7  -4.26202   ACATGCATCAACAAA             GGAAGCC TTTT AGCTTCC              TCGTTGTGCAATAGA  79 41
SH08_RS15090 3034620 .. 3034640 -    -6  -3.37487   TTAGATCCTGAAACA            CGCCACCG TTATC CGGCGGAG            TTCTCTGGTGGTCAG  56 344
SH08_RS15035 3021726 .. 3021747 -  -2.9  -2.71712   CGCCGGGCTGGAAAT           CCCGACGAT GTTG ATTGCCGGA            TATTTCGCCAAACGT  41 385
SH08_RS15025 NONE
        fruK NONE
SH08_RS15015 3016743 .. 3016775 - -14.3  -3.72576   TTTGCGCTCATCAAA      TGTTACAGGACAGGA AAT TTCTGCCCTGTAACA      CACCTTTTATTACGC 100 35
SH08_RS15010 NONE
SH08_RS15005 3014428 .. 3014445 - -10.5  -3.54424   CTTCATGCCGGTAAA             CCCGGCG TCAG CGCCAGG              TTTTGGTATGCTTGA  80 75
SH08_RS15000 3012657 .. 3012679 -  -4.1  -3.57808   GTTAATCGATAAAGA          CCATGAACCG CGTG CGGTGCA-GG           CTATTGAAGAGTGTT  53 497
        rihB 3011264 .. 3011299 - -11.8  -3.96148   TCTGCCCATCAGAAA    TAGCCAGGCCTGCATC TTGC GATACCGGCCCGGCTT     GTTATCAACACTTAA 100 37
SH08_RS14985 3009858 .. 3009899 -    -8  -3.63569   CCAATGGTGTAACAA TGT-TGCCGGATGCGACGC TTAAC GCGTCTTATCCGGCCTACA AATCAGGCAATTTCA  70 87
SH08_RS14965 NONE
SH08_RS14960 3004088 .. 3004107 - -13.6  -4.75776   AATGGAATTGAAAAA            GCCCTCTC GGTT GAGAGGGC             TTAGCAAGGAAGGGA 100 47
SH08_RS14955 3001815 .. 3001837 -  -3.3  -3.76952   TTTACTGAAGTGAAA          GTCCGCCCGG TTCG CCGGGCAT-C           TTCTCATCAGAAGCG  53 32
        folE NONE
SH08_RS14935 NONE
SH08_RS14925 2997593 .. 2997604 -  -4.4  -4.08767   GTTACCTCGGCAAAA                GTGA TTAT TCAC                 TGTTACATACGGGTT  61 115
SH08_RS14920 2996385 .. 2996407 - -14.9  -3.88232   TTGGCCATACAATAA           GGGCGCAGT AATAG ACTGCGCCC           AATCAGTCTTATTTC 100 34
SH08_RS14915 2994692 .. 2994705 -  -2.3  -3.05384   TTGCCCGGCATCCAA               CGCCA TTCA TGGCC                ATATCAATGATTTTC  42 158
SH08_RS14910 2994073 .. 2994098 -  -6.1  -3.39772   TTAAAGGTGCAAAGA         CGCAAGACGCA GAAT TTCGTTTTGCG          TTGTTGTTTTTGTAT  59 111
        mglC 2992799 .. 2992832 -  -8.9  -3.10533   TTGTAAAACCAGAGA     CGCATCCGGCA TTTGGTTCCTGT CGCCGGATGCG      GCTTGAACGCCTTAT  69 225
SH08_RS14865 2985460 .. 2985499 -   -20  -2.71364   TCACTGGCGCAAGGA  GCGCGCAGGGGGCGGC CAATCGCC GCCGCCCCCTGCACCC   CCGGGCTCTGGCGAA 100 253
SH08_RS14855 NONE
SH08_RS14850 2982650 .. 2982664 -  -5.6  -5.06816   ACGCGGGAAGAAAAA               GCCGGA TCA TCAGGC               GTAAAACCATTGCCC  82 159
SH08_RS14840 2981286 .. 2981319 - -14.7  -2.84527   GAATCGTGAGGAAAT     GCTGCATTGCTGACA TTTA CGCCAGCAATGCAAC      GTCAAAGAACTTTCT 100 39
        pbpG 2980193 .. 2980221 -  -7.6  -4.74801   GAAGTGGAGTAAAAA       TTACGGATGGCAGA GTA TC-GCCATCCG-AA       TTCACTTAATCGTTC  91 31
SH08_RS14825 2975951 .. 2975969 - -12.4  -3.86015   TATCCGGCCTACAAA             GGGCGCAA ACG TCGCGCCC             TTACTAAAGCATTAC 100 37
SH08_RS14820 NONE
SH08_RS14815 NONE
SH08_RS14810 NONE
SH08_RS14805 2971836 .. 2971851 -  -3.2  -3.27923   GCCCAACAGCAGCAA              CTCACC AGTT GGCAAG               AACAAGGCCATGATA  47 208
SH08_RS14790 NONE
SH08_RS14785 2968515 .. 2968525 -  -3.2  -4.68593   TTGATGAGGCAAAAA                 GCCA TTT TAGC                 AGTCTTTTACAGGCC  65 32
SH08_RS14780 2967607 .. 2967633 -    -8  -4.29073   GAAGAATCGAAGAAA         TTCAGCGCCAAT CTG AACGGCACTGAA         ATTGCCATTACCTAT  76 407
SH08_RS14725 2949286 .. 2949318 -  -9.9  -3.80855   TGCGGCAAAAACTAA      TACACCGCATCAATG TAA CATCTCTGCGGTGTA      TGAAGAATAACCAGA  84 55
SH08_RS14720 2948742 .. 2948771 - -16.7   -5.5353   GATATCAATAAAAAA       GCCGAAATCATTT ATAT AAATGATTTCGGC        TTTCTAAATGCAATT 100 58
SH08_RS14710 2947912 .. 2947932 - -13.3  -4.54727   CCTCTTAAATTAAAA            GGCCGCCAT GGG ATAGCGGCC            ATGTTTATTACCTGG 100 62
SH08_RS14705 2947201 .. 2947213 -  -3.3  -3.07895   GTCATTCTCAACATA                GGCAG CTC CTGCA                ATTAAATTTTGTCAC  46 27
SH08_RS14700 NONE
SH08_RS14695 2943593 .. 2943613 - -11.1  -5.42259   TCATCGCTAAAAAAA            GCCCCCTCA TCA TGAGGGGGA            AATGCAGACACCTTG 100 81
SH08_RS14680 2941623 .. 2941634 -  -5.8  -2.72013   ACGTGAAGAAGCAAT                GACC TGGT GGTC                 CGTGACTTCCCTACG  52 204
SH08_RS14675 NONE
SH08_RS14670 2939999 .. 2940013 -  -3.5  -2.66008   AAAGCAGCTATAGTA               CGGTG CTCAC CACCA               GGCGTGGAAGTGGTG  44 17
SH08_RS14665 NONE
SH08_RS14660 NONE
SH08_RS14640 2933617 .. 2933638 - -13.7  -5.58209   TGAAAGGCAAAAAAA           CGGCCTCCC GATA GGGAAGCCG            TAGCAAAGTGCGCGT 100 188
        gatY 2932629 .. 2932650 -    -8  -2.71712   TTTTCCTTGTTAAAT           GGCAGGTGC GTTAT GC-CCTGCC           CTCGCAGCCACAATC  60 14
SH08_RS14630 NONE
SH08_RS14625 NONE
SH08_RS14620 NONE
SH08_RS14615 2929216 .. 2929226 -    -4  -3.26405   CTCAGGTAAAAATTA                 TTCT GCG AGAA                 CGACTTTCTCTTGTT  51 12
SH08_RS14610 2928097 .. 2928121 - -13.5  -3.21276   CTGTTTTGCACAATA          CCGGGCCAGCA TCA CGCTGGCCCGC          GGTTTCAGGGAATGA 100 30
SH08_RS14605 2927676 .. 2927686 -  -3.2  -4.24123   GGAACAATTTGAAAA                 CAAG AAC CTCG                 CTTAGGCCTGTGTCC  58 60
SH08_RS14590 2925935 .. 2925979 -   -13  -3.39595   TTGAACCAGGGAGAA TCCGTAATGCCGGATGCGGTG TAAA CACCTTATCCGGCA-TACAGA ACAATACTACACCGT 100 32
SH08_RS14580 NONE
SH08_RS14575 2923564 .. 2923581 - -12.7  -5.29782   CACATCGACAAAAAA             GCCCCTC GACT GAGGGGC              TTCCTGTTTCTAATT 100 472
SH08_RS14525 2908753 .. 2908774 -  -8.7   -2.7035   TTGATGCATAGACCA           GACGCCAGC TCAC ACTGACGTC            CAGCCTTTTGGCGCT  66 13
SH08_RS14520 2907966 .. 2907995 - -12.3  -2.73243   ATTTATTGTTTAAAC       TGGCGGTTGAA TTGTTGTC TTCAACCGCCA        TGAGAAACTCACTCT  88 34
SH08_RS14510 2904899 .. 2904925 -  -8.6  -2.70932   TCGTCTGCTTAACGA         TCTGGTACGCGA TGC CCGCGAACCGGA         AAAAGTGGCCCTGTT  60 432
SH08_RS14500 NONE
SH08_RS14495 2902956 .. 2902967 -  -3.6  -3.30124   CCCCAGGCCGGATAA                GGCG CTCG CACC                 GCATCCGGCGACCAA  49 43
SH08_RS14485 NONE
SH08_RS14480 NONE
SH08_RS14475 2895599 .. 2895611 -  -4.1  -4.72272   CCGCTGGATGAAAAA                CGTGA ATA TCACA                CCATTGCCGGGCTGT  70 466
SH08_RS14465 NONE
SH08_RS14460 NONE
SH08_RS14455 NONE
SH08_RS14450 NONE
SH08_RS14445 NONE
SH08_RS14440 NONE
        wcaD NONE
SH08_RS14430 NONE
SH08_RS14425 NONE
SH08_RS14420 NONE
SH08_RS14415 NONE
SH08_RS14410 2882043 .. 2882055 -  -6.2  -2.58861   CAGTATTTTCATAAT                CCGG GTACT CCGG                TACGCTTCTCAGCGA  54 6
SH08_RS14405 NONE
        cpsB NONE
SH08_RS14395 2877895 .. 2877923 -  -2.4  -3.14878   TGGGGTAAGGGAAGA        TCCGACATTACT CGTTC AGCAACGTCAGC        AGAGTTCGCGTTCGC  43 4
SH08_RS14390 NONE
SH08_RS14385 2874828 .. 2874874 - -15.1  -2.62463   CGTAGGACGGATAAG GCGTTCACGCCGCATCCGGCA TTCAG TGCCTGATGCGACGCTGACGC GTCTTATCAGGCCTA 100 124
SH08_RS14380 NONE
SH08_RS14375 2872208 .. 2872220 -  -5.5  -3.85698   GTTCTCCTCTATAAA                GCCTG CAG CAAGC                TGGCGAGTTCTCGAT  61 6
        wcaM NONE
SH08_RS14365 2869633 .. 2869688 - -18.7  -4.52857   ATGGTTTATATAAAA CAACGGCAG-GAAGATTCGCAACAAA TTACT TTTGCTGCGAATTTTCACTGCCGTTA TAATTTTCTTATCAA 100 65
SH08_RS14360 NONE
SH08_RS14355 2867336 .. 2867360 -  -2.2  -2.52543   ATTCCTTTTAATTCA          TCTTGCTC CACCATCAC GAACAAGA          TGCAAAAACTATTAA  39 37
SH08_RS14350 NONE
SH08_RS14345 NONE
SH08_RS14340 NONE
SH08_RS14335 NONE
SH08_RS14330 NONE
SH08_RS14325 NONE
SH08_RS14320 NONE
SH08_RS14315 NONE
SH08_RS14310 NONE
SH08_RS14305 2857767 .. 2857781 -  -2.8    -4.323   GCTAAATATCTAAAA               GTACTT TTT AAGTGC               CATCTGAAGGCTTTT  59 434
SH08_RS14300 2856107 .. 2856129 - -11.2  -5.75945   ATTTGGCAAAAAAAA           GCCCGGTGCA ATA TACGCCGGGC           CTCAATTTTATTGTT 100 53
SH08_RS14295 2854711 .. 2854731 -  -8.3  -4.09554   AGTAACAAAAGACAA            TCAGGGC GTAAATA GCCCTGA            TAACAAGATGTTAGT  79 36
SH08_RS14290 2853569 .. 2853594 - -11.1  -5.41143   CATCCGGCAAAAAAA         CGGGCAAGGTG TCAC CACCCTGCCCT          TTTTCTTTAAAACCG 100 47
SH08_RS14245 NONE
SH08_RS14240 2845520 .. 2845536 -  -8.1  -3.53184   TATCAAAACTGACAA              TTCATTC TAT GAATGAA              TCTGTTCAATAATGA  68 31
SH08_RS14235 2844593 .. 2844616 -    -3  -2.87344   CAGTGGTTTCATACA          CGCCCCCTTGC AGT GCATGCGG-CG          TCCTGCTGGCGTGAT  43 44
SH08_RS14230 2843551 .. 2843571 -    -9  -4.72473   TGAAGCAAAAAATAA            CCGACGCT GATGA AACGTCGG            TTTTTAGTCATTTTT 100 114
SH08_RS14225 2841987 .. 2842014 - -12.8  -6.04419   AAAAGAATAAAAAAA        CCGGAGCCAAAT GTTC ATTCGACTCCGG         TTTATTATTAGAAAA 100 46
SH08_RS14220 NONE
SH08_RS14215 2840106 .. 2840121 -  -3.2  -4.08064   AATTCTGCGTGAAAA              TCCGCA AGTG CGCGAA               AAAGTGGTGGCGATA  58 461
SH08_RS14205 2837678 .. 2837693 -  -3.2  -2.80113   GATTATGCGAGCAGA              CTCGCA CTCC TGCCAG               TCTGCTGCAAAAGAA  43 44
SH08_RS14200 2837007 .. 2837029 -  -6.3  -3.92373   TATCCGACGGACAAA           CCGGGAA CAGTGTAAT TTCCCGG           CAGGAGCGAAAAAAT  67 116
SH08_RS14195 2835848 .. 2835862 -  -2.8  -2.78495   GCAGCAGCAAGATGA               TTCTGA AGT TCAGGA               ATTATTTGCGCAAGG  42 27
SH08_RS14190 2835320 .. 2835350 -   -17  -2.91042   GATAAGAATCAATGA       GCAATGAGGGTTGC CGG GCAACCCTCATTGA       ATAAAACGGGAATTA 100 38
SH08_RS14130 NONE
SH08_RS14125 2825076 .. 2825092 -  -6.5   -3.4409   AACAAAAATCAGCAA              CGAAGAG ACG CTCGTCG              TGACCACGAATCGTT  61 216
SH08_RS14120 2823623 .. 2823635 -  -3.3  -3.22476   ATGACTCATGATGAA                CCCTG TTC CATGG                CTCCAGATGACAAAC  46 149
SH08_RS14115 2822143 .. 2822153 -  -3.2  -3.97511   CATTGAACAGAACAA                 TGGA TCC CCCA                 CCGTTGCTGACCGCA  56 508
        cobU NONE
        cobS NONE
        cobT 2819680 .. 2819698 -  -3.1  -3.54424   TCCTATGTCGCGAAA             GCTATCC GTTAA GTATAGC             TTTTATCAGACTTTT  49 46
SH08_RS14090 2818678 .. 2818695 - -11.3  -5.22039   GCCAAATTCAAAAAA             GCCTGCT TTCT AGCAGGC              TTTTTGCTTTCTAAT 100 52
SH08_RS14080 NONE
         cbl 2816271 .. 2816287 -  -9.4  -3.07283   CAAATTCCTGAAAAG              CCCGCT TTTAT AGCGGG              ATTTTTGCTATATCT  72 33
SH08_RS14065 2814435 .. 2814446 -  -4.4  -3.35278   TGAACTACAGAGGAA                TCGT GAGA ACGA                 GGCGAATATTAGCGA  51 113
SH08_RS14060 2814267 .. 2814295 -  -9.6   -5.4387   ACAGAAATCAAAAAA        CCCGGTCACTTT TTTAC AAGGTAACCGGG        TAAAAATAATTTTTA 100 88
SH08_RS14040 2808369 .. 2808390 -  -4.3  -3.58533   TTATAATTTCTTAAA           GAGTGTTCC ATTC GGGGCACTC            TTTTTTACATTCCCT  54 243
SH08_RS14020 2799293 .. 2799305 -  -7.7  -3.07307   TAAATGTTTACGCAA                GTGCA CAA TGCAC                CCTTTCCACTATCAA  59 520
SH08_RS13985 NONE
SH08_RS13980 2792657 .. 2792669 -  -4.8  -3.59979   TTGGTTTACCTGAAA                GCCA GGACG TGGC                TGCCGCTTTACAGTG  55 482
SH08_RS13970 2791460 .. 2791498 -  -6.9  -4.16909   ACTTCAACAAAAACA  TGTCCACCTATGTTGATT ACAA AATCAACCT-GCTGGACA   ACGACGATGACTTCT  72 103
SH08_RS13955 NONE
SH08_RS13950 NONE
SH08_RS13945 NONE
SH08_RS13940 NONE
SH08_RS13930 NONE
SH08_RS13925 2784479 .. 2784503 - -16.5  -2.83164   GCAGGCATTAGCACA          CCAGGCCGGAT GTG ATCCGGCCTGA          TGTTAATGATACCCT 100 42
SH08_RS13920 2782458 .. 2782482 -  -8.6  -3.65827   CAATTGTCAGGCAAA         CGCCCA-ACCA CACT TGGCCTGGGCG          ATGGGCCAAACGATG  69 198
SH08_RS13905 2780926 .. 2780959 - -13.9  -3.04248   CAACATGCGCTAACA     CATTCTGACTGGTGG TTTC CCACCAGTCAGGCTG      AATAAGATTACTCTG 100 33
        fliE 2769019 .. 2769034 -    -4  -3.82604   GGATGTAATTAACAA              CAGGTT ACAA AACCTA               CACCTGCATGCTCAT  57 23
SH08_RS13820 NONE
SH08_RS13815 2767569 .. 2767579 -  -5.4   -2.7898   TTTAATATTTAATTA                 TGAG TTC CTCA                 CCATCTATTACATAC  50 1
SH08_RS13790 2763981 .. 2764001 -   -14  -2.66272   GGTGATTTAAATTCA            TCCCCGGC GGCAA GCCGGGGA            GATTTCATTACGGCA  95 33
SH08_RS13765 2758251 .. 2758267 - -15.1  -5.64274   CCAGGCAGAAAAAAA              CCCCGCC GGT GGCGGGG              AAGCACGTTGCTGAC 100 200
        fliA NONE
SH08_RS13755 NONE
SH08_RS13750 2755879 .. 2755896 -  -8.4  -5.63517   CGCGTAAATAAAAAA             GGCGCT AGTGAA AGCGCC              CTTTTTTGTCATTAT 100 46
SH08_RS13745 NONE
SH08_RS13740 NONE
SH08_RS13735 2753205 .. 2753222 -  -3.5  -3.38272   GAGTATCATTTATAA             TGATAAT TCAA ACTATCA              CATAAATAAGATTTA  49 197
SH08_RS13730 2752382 .. 2752408 - -12.3  -4.70583   GTCAGTAATATAAAA         CCGGCTGATAG CGTGC CTTTCAGCCGG         TTTTTGCATCTGGCA 100 59
        sirA NONE
        uvrC NONE
SH08_RS13705 2748598 .. 2748610 -  -4.1  -3.60431   AAAATTACGCCGAAA                CGATC ACT GATCA                AGCAAATCTGCACGC  54 16
SH08_RS13700 NONE
SH08_RS13695 NONE
SH08_RS13690 2748087 .. 2748100 -  -8.1  -5.64274   GCAGGCACAAAAAAA               CCACC CGAA GGTGG                TTTCACGACACTGCT 100 72
SH08_RS13685 2747241 .. 2747282 -  -5.1  -2.75819   CAGATAGCCTCAAAT TCCTTATTGGGTGCCAG AATTAACG CTGACACCCAATTTGGC  CTCTTAATGCAGGCA  50 29
SH08_RS13675 2745472 .. 2745482 -  -6.8  -3.61988   TTATTGATAAATTAA                 GCCT GGC AGGC                 AAAAGCGGCGAAGGT  63 126
SH08_RS13655 2743806 .. 2743833 - -13.5  -3.86822   GAAGGTTTTGAGAAA        CCGCTGCCTCA TCTGTT TGAAGCAGCGG         TTTTTTTAATGGGAT 100 31
SH08_RS13645 NONE
        araG 2739895 .. 2739905 -  -6.8  -3.07816   TCCTTACTCAGGCAA                 CAGC CTG GCTG                 ACTTTAGGCATCGCA  59 7
        araH 2738824 .. 2738845 - -11.6  -3.49048   TTGCAACGAAGAACA           GCCAACCG TTATGG CGGTTGGC            TATGGTGGGAAAAAA  89 66
SH08_RS13630 NONE
SH08_RS13625 2736151 .. 2736164 -  -2.3  -4.08692   CAACTGCTGGCAAAA               GCGGT ATCT ATCGC                CAGGCCAGTAAAGGG  56 381
SH08_RS13615 NONE
SH08_RS13610 2734324 .. 2734347 - -12.5  -5.75342   TTGGGGCAAAAAAAA          GCAGCGGTA CGTCGT TACCGCTGC           TGGAATGTTGCGCCT 100 52
SH08_RS13605 NONE
        motB NONE
SH08_RS13595 NONE
SH08_RS13590 2729895 .. 2729915 -  -8.3  -5.67283   AATTGAAATAAAAAA            CCCGATG CGCAGAT CATCGGG            TTCATTTCAATTGAG 100 54
SH08_RS13585 NONE
SH08_RS13580 2726464 .. 2726493 -  -2.1  -2.90763   CCCACAGGGCAGAGA       TGAAGTCATAGCG CCTT CTCAATCACTTCA        GGATACCACTGGCGC  42 23
SH08_RS13575 NONE
SH08_RS13570 NONE
SH08_RS13565 NONE
SH08_RS13560 2723459 .. 2723494 - -13.4  -2.78596   CATCGCCTTATCAGA    CCGCCTGATATGACGT GGTC ACGCCACATCAGGCAA     TACAAATCAAAATCC  93 32
        flhB NONE
SH08_RS13550 NONE
SH08_RS13545 2719311 .. 2719321 -  -6.8  -3.92996   CGTTATATAGAACAA                 GTGC CAC GCAC                 AGGTGTAAAAAAACC  68 392
SH08_RS13530 NONE
SH08_RS13525 2715556 .. 2715580 -   -10  -5.64274   TCAGGGATAAAAAAA          GGCCCCTG TTGAAATTG CAGGGGCC          TGGTACGAGCAAGCA 100 73
SH08_RS13520 2714134 .. 2714152 -    -3  -3.14132   TTCCTCCCTGATCAA             CGAGGATC ACT GTTTCTCG             GTAATATCTTTGGCG  46 13
SH08_RS13515 2711358 .. 2711370 -  -9.1  -2.87132   GTGGTTTTGTAGATA                TCCGC ATT GCGGA                TGTGAGCGTTACCAC  65 341
SH08_RS13485 2705829 .. 2705844 -  -3.2  -3.05384   GCCGCCTCGATGCAA              CGCGAA TGAT TTCGTG               TATTTGAGTCATATC  44 39
        nudB 2705265 .. 2705276 -    -3  -4.83615   GACCTGCCATAAAAA                TATC TCCA GATA                 GCCCTGCCTGTTCAG  68 37
SH08_RS13475 2704526 .. 2704536 -  -6.8  -2.94218   AGGCCTCATCAGAGA                 GTCG CTG CGAC                 CTCATCAGAGATTTC  58 8
        ruvC 2703930 .. 2703955 - -10.4  -3.61178   CGGAGGGAGTGGAAA         CGCCTCAGCC GGAACT GACCGAGGCG          GTATAACTTAACGCA  82 33
        ruvA NONE
SH08_RS13455 2701399 .. 2701437 - -11.7   -3.0976   GGTAAGACGCGAACA   GCGTCGCATCAGGCA TATTGCCAG TGCCGGATGCGGCGC   GAGCGACCAATCCGA  84 42
        znuA NONE
SH08_RS13435 2697382 .. 2697404 - -10.6  -5.99154   CACCAAATAAAAAAA           GCCGGTAC TGACTGC GTACCGGC           TGCGAATGGATGTTA 100 42
SH08_RS13430 2696203 .. 2696241 - -13.9  -2.81725   ACGGTAGAGTAAGTA  CGTTG-CCGGATGCGGCG AAAA CGCCACATCCGGCCTACA   GTTCAATGATAGTTC  95 114
SH08_RS13415 2693556 .. 2693571 -  -5.4  -4.15565   GCGATTACGGGAAAA              GCGCGCA AAG TGCG-GC              AAAACTGATAAAAAA  65 42
SH08_RS13410 2691842 .. 2691867 - -11.2  -5.80364   AGTGTAATAAAAAAA         GCCTCGTG-GG TGAAT CCGCACGAGGC         CTGAAAGTGTAAAAA 100 105
SH08_RS13405 NONE
SH08_RS13400 2689193 .. 2689213 - -15.5  -4.90296   AAAACGCTACAAAAA            TGCCCGATC CTC GATCGGGCA            TTTTGACTTTTACAG 100 35
SH08_RS13390 NONE
SH08_RS13385 2687094 .. 2687105 -  -3.6  -3.28712   TTCTGGGGCGGACAA                GGCA CTCG CGCC                 GCATCCGCCAACAGT  49 62
SH08_RS13375 2686150 .. 2686164 -   -10  -2.91582   CAGGCTATCCAGAGA               GCGGAA TTA TTCCGC               CAAAGTGCGTTTTTG  73 17
SH08_RS13370 2683705 .. 2683731 -    -5  -3.32844   GGCTGGACGGCAGAA         CAGATGGCCGAT ATC ACCGGACGTCCG         TCGTTGATGACGACC  51 181
SH08_RS13350 NONE
SH08_RS13345 NONE
SH08_RS13340 2680407 .. 2680436 -  -5.1  -4.70879   CTGAAATGTTAAAAA      CCGCC-C-GTTCT GGTGAA AGAACTGAGGCGG       TTTTTTTATTGGAAA  73 62
SH08_RS13335 2680219 .. 2680245 -  -8.8  -4.16832   TAACAGATAAAAAGA         GACCGAACAC GATTCCT GTATTCGGTC         CAGGGAAATGGCTCT  83 82
SH08_RS13330 2679136 .. 2679152 -    -5  -4.44608   CTGATCCAAAAAGAA              CCCGTC GGCAT GGCGGG              TTATTTGTCCTGGTT  68 294
SH08_RS13300 2672692 .. 2672711 -  -6.4   -3.1552   GCGCAGGCATGAACA            GGCGTCAT TATA ATGACGCT             ATCAGTAAATGCTAC  57 53
SH08_RS13295 NONE
SH08_RS13290 2669846 .. 2669869 -   -14  -5.00616   GTCGCTGTTAAAAAA          TCAGGCACAA TTTC TTGTGCCTGA           TTGATATTACTTGAC 100 32
SH08_RS13285 2668763 .. 2668782 - -10.7    -5.626   CAGGGCATAAAAAAA            GCGCGTC GATCAG GACGCGC             TTTTTAGTATTTACT 100 46
SH08_RS13275 2666376 .. 2666406 -  -6.9  -4.44046   CTCATGCTAAATAAA       GAACCTGTCTG TTTGATATT CCGACAGGTTC       TTACTCTCATCAGAA  76 35
SH08_RS13265 2665729 .. 2665743 -  -2.8  -3.37655   GTGCTGAAAAAATGA               TATCAC CAC GGGATA               AACTGGTTAATGGCA  46 13
SH08_RS13260 2665324 .. 2665355 -  -9.6  -3.25729   TATAATCAGGATGAA      TTGAGTAAC-CCTTC AAC GACGGGGTTACTCAA      GATTGAGGAAGGATT  74 39
SH08_RS13250 NONE
SH08_RS13245 2664267 .. 2664285 -  -8.1  -4.85177   AAAGCATAGTAAAAA             GCCTCGC ATTCG ACGAGGC             TTTATAGCGAGATTG  91 74
        rrmA 2663090 .. 2663106 -  -7.9  -2.55437   GATGAAGATGAAGAG              CCGCGCC GTC GACACGG              TTTCTGGCTACTGGT  56 278
SH08_RS13205 NONE
SH08_RS13200 2657062 .. 2657096 - -14.9  -3.54424   CGTGATTTTCCCAAA     TGGCTGGCGGGCAGC CAACC GCCGCCCGCCCGGCA     TAATGGACATATCAC 100 66
SH08_RS13175 2651338 .. 2651356 -  -3.2  -3.17723   GCACGGCGAAGGGAA             TCTTTAAA TAT TTAAAAGA             ACTGGGAGTACCCGC  45 329
SH08_RS13160 NONE
SH08_RS13155 NONE
SH08_RS13150 2647013 .. 2647037 - -14.4  -2.66106   TACCGTAAGAATGCA          GAAACAGCGG ACCAG CCGCTGTTTC          TTTTTCTTTAAAAAC 100 47
SH08_RS13145 2645132 .. 2645148 - -10.8  -5.75342   GGGCGTCAAAAAAAA              CGCCGG ATTAA CCGGCG              TCTGACGACTGACTT 100 46
SH08_RS13140 2643791 .. 2643801 -  -3.2  -3.57561   GCGGAACCTGCGAAA                 CAGC AAT ACTG                 GAAGGTGAAGCTGAC  51 196
SH08_RS13115 2637953 .. 2637968 -  -7.6  -4.64846   TTAGAAAGGAGAAAA              TCAGGT TTTA ACCTGA               TATCAACCCGATAAT  86 52
SH08_RS13110 2637198 .. 2637208 -  -2.4  -2.96395   AGGGAGGATTATAGA                 TGGG AAG CCCG                 CGACAACGCGGGCTG  42 47
SH08_RS13105 NONE
SH08_RS13100 2636522 .. 2636536 -    -5  -2.82529   GATAATTACCAACCA               CAAACA TCA TGTTCG               TTTTCCGTGTCATAA  49 1
SH08_RS13095 2636077 .. 2636102 - -13.4  -3.08056   ACCTCTAAAAAATAG         CAAAGGCTGC CTGTGT GCAGCCTTTG          TGCAATTTAAGCGTT 100 39
SH08_RS13080 2634314 .. 2634338 -  -6.5   -5.1675   CTACTCAGCAAAAAA         CACCA-CGCA GAACCA TGCGCTGGTG          CTGGCCGACTGGCTA  86 74
SH08_RS13065 2631425 .. 2631436 -    -3  -2.80464   GCAGCAAGCGTAAAG                TAAG CAGG CTTA                 TTATTTTTTGGCAAG  43 453
SH08_RS13055 2630701 .. 2630717 -  -2.1  -3.64236   ACTGAAATGGCTAAA              GGAAGCG TGA CGCATCA              GCGGTTAATCGCTTT  49 495
SH08_RS13025 2622783 .. 2622799 - -13.7   -4.2803   CACCGTAATGCAAAA              CAGGGCG TGA CGCCCTG              TTTTTATGCACAAAA 100 61
SH08_RS13020 2621848 .. 2621895 - -19.4  -2.56046   CGAAACGTTAATTTA CGTTAATGTTGTGTGCCGGGTGC AAT GCATCCGGCACACAACATCA-CA CCATATCCAGCGCAG 100 21
SH08_RS13005 NONE
SH08_RS13000 2618519 .. 2618552 - -12.7  -2.95341   AGGTCAACATTAAAT     CTGTAAAACACAGAT AATG ATCTGCGTTTTACAA      CTCAGATCACAATTA  93 284
SH08_RS12995 NONE
SH08_RS12990 NONE
SH08_RS12985 NONE
SH08_RS12980 NONE
SH08_RS12975 NONE
SH08_RS12970 2611994 .. 2612013 -  -2.2  -2.85351   TCTTTTTACATCACA            TTAGCGCGA TTA TCGCA-TAA            CCGATGTTTACTTTC  41 112
SH08_RS12965 2611122 .. 2611143 - -10.9  -2.57261   TAAAAAGGTAGCAAT           TGCGGCAAA TTCA CTTGCCGCA            TCTTTATCATCATTT  76 87
SH08_RS12960 2609373 .. 2609385 -  -4.7  -3.28712   TGCCTTTTTTGATAA                CGGCC GTC GGCAG                AAAACCTCTCTCGAT  51 370
SH08_RS12935 NONE
SH08_RS12930 NONE
SH08_RS12925 NONE
SH08_RS12920 2602037 .. 2602067 -    -7  -5.81412   TCCATGCAAAAAAAA       TATCCAACGAAT TTTCTTG ATCCGCTGGATA       TTTCAGAATATGACT 100 66
SH08_RS12915 2600833 .. 2600858 -  -8.3   -2.7644   ATTTAAGTTGTAAAT         GCCTGAT-GGCG CTA CGCTTATCAGGC         CTACAAATGGGCACA  64 107
SH08_RS12905 2598730 .. 2598746 -  -3.6  -2.84051   CGAGCCGGATGAAAG              TCAGCG GCAGG CGCTGG              TGCGTGAGTTACGCG  45 251
SH08_RS12895 2597841 .. 2597856 -  -4.6  -5.09895   CAGCGATCCAAAAAA              TCCGGT AGCA ACCGGT               GAACGCGGCCCGGAC  81 61
SH08_RS12845 NONE
SH08_RS12840 NONE
        astD NONE
SH08_RS12830 NONE
SH08_RS12825 2583034 .. 2583059 - -16.3   -3.2827   AAGAAAGCAACTTAA         TACCCGCAGAA TGAT TTCTGCGGGTA          AGTATTAGCTTATTT 100 30
SH08_RS12820 2582175 .. 2582225 - -19.8  -5.26907   GAAGAGAAAAGAAAA CCGCCGATCCTGTCCACCGCATTA CTG CAAGGTAGTGGACAAGACCGGCGG TCTTAAGTTTTTTGG 100 49
SH08_RS12815 2581227 .. 2581241 -  -5.6  -3.22774   GAGAGCCATGAGGAA               CATGCG CTA CGCTTG               CGCCAGTCTCTGGAG  52 255
SH08_RS12805 2580292 .. 2580308 -    -3  -4.74103   TCTGGAAGGGAAAAA             CGTACCT CAAC AGGT-CG              CCAGAACAATAGAGA  71 80
SH08_RS12795 2578977 .. 2578992 -  -7.5  -5.78622   TCAGGCCAAAAAAAA              CCGGC GCAATG GCCGG               TTTCCGTTGTTACTC 100 60
SH08_RS12790 2578343 .. 2578362 -  -7.9  -4.62904   AAATACCCTTAAAAA            CCGCAAT TTAAAT ATTGCGG             TATTGATTTATGAAA  86 71
SH08_RS12785 NONE
SH08_RS12780 NONE
SH08_RS12775 2575672 .. 2575684 -  -3.3  -4.14627   CCCGGACATAAATAA                TCCAG CAA CAGGA                CAGATATGTGAATTG  58 55
SH08_RS12770 NONE
SH08_RS12765 2573451 .. 2573484 -  -5.9  -3.39895   CTTTGTAGGAATTAA     TCGCCGGATGCAAGG TTCA CGCCGCATCTGGCAA      ACATCCTCACTTACA  57 36
SH08_RS12755 2570500 .. 2570518 - -12.4  -3.06796   TTTCAGGTCATGTAA             CTCCCGGC AAA ACCGGGAG             GTATGTAATCCTTAC  93 37
SH08_RS12750 2569074 .. 2569084 -  -8.2  -3.30619   AACCATTGGTCAGAA                 CGGC TGC GCCG                 GTTTGTATCCGGCAA  65 379
SH08_RS12730 2565783 .. 2565799 - -10.8  -2.64099   TGGGTTGAGGATAAT              GGCCGC TCCGT GCGGCC              TTTTGATTAAATAAA  76 32
SH08_RS12710 2562401 .. 2562425 - -12.1  -3.25317   TGACAAACGAAGACA          GCCAGACCGCA TAA CACGGTCCGGC          AGATAATTTTACATG  89 34
        thrS NONE
SH08_RS12690 2557160 .. 2557187 - -14.2  -4.23707   ACAAAGGCGAACAAA        GCCTGTGAAGCC CGAA GGCTCCACAGAC         AGTGCTACTTGAAGG 100 43
SH08_RS12685 2556893 .. 2556907 -  -2.9  -4.87291   TATTCTAATTAAAAA               GTTAA AAACG TTAAC               GGCTTATGCGTACGG  67 29
        rplT 2556472 .. 2556490 - -10.3  -4.54727   GCGTTGAAACGAAAA             GAGGGAG ACTAG CTCCCTC             TTTCAACTGGCTTAT 100 37
SH08_RS12675 NONE
SH08_RS12670 NONE
        pheT NONE
        ihfA 2552330 .. 2552344 - -12.8  -5.80951   AGTGAAAAGAAAAAA               GGCCGC AGA GCGGCC               TTTTTAGTTAGATCA 100 43
SH08_RS12655 NONE
        btuE NONE
SH08_RS12645 2549910 .. 2549922 -  -2.7  -3.07895   CCGATTTTCAAGATA                CTAAT GAA ATCAG                ATGGTCGAAATCAGC  44 22
SH08_RS12640 2549338 .. 2549364 -   -21  -3.79747   GTATTCAGGAGTAAA         TGGACGGCGATG TAT CATCGCCGTCCA         TTTTTCGACATACTA 100 38
SH08_RS12635 2548348 .. 2548360 -  -3.3  -3.55261   GGGTAACAAAAGACA                GGGTC ATA GATCC                TCCTGTTTGATAGTG  49 82
SH08_RS12630 2546407 .. 2546435 -  -3.9  -3.73402   ATATTTGTCAGCAAA       TCC-GCAATGGC TCTACG GCGATTGCTGGA        ATTATGGCGGAAAGT  56 508
SH08_RS12610 2544261 .. 2544272 -  -2.2  -3.86822   GAACGGTTTGAGAAA                CACA TTTC TGCG                 CATTTATCTTTGCAT  51 29
SH08_RS12605 2541812 .. 2541836 - -16.4  -3.54475   TCGGGGATCACATAA          CCCCGGCGAC TAAAC GCCGCCGGGG          ATTTATTTTATTTCT 100 33
SH08_RS12575 2536445 .. 2536477 -  -6.3  -4.90869   ATGAGCAAGCAAAAA      CAATATATGCCGGAT AAA ATACGGCGTGTATTG      CGGTTATACAACCGC  80 63
SH08_RS12570 2535460 .. 2535500 -  -8.3  -3.16387   ATCAGAACAAATAAT CTGCAGGCGGCGCAGCTT CTTAAC AAACTGCGCCGCCAG-AT  TTATCCAACAAGACT  67 26
SH08_RS12525 NONE
SH08_RS12520 2522257 .. 2522288 - -12.4  -3.31726   CGCTTTTAGACAAGA      CCTGCACAGTATAC CACC GTTTACTGTGCAGA       TAATGACCAAAAGCA  95 70
SH08_RS12515 2521790 .. 2521820 -   -17  -5.05116   TCAGAAATAAGAAAA       CCCTTAAGTCTGTG CGA CACAGGCTTAAGGG       TTTCTACCCCATCCG 100 250
        sufA NONE
SH08_RS12505 NONE
        sufC NONE
SH08_RS12495 NONE
SH08_RS12490 NONE
SH08_RS12485 2515934 .. 2515952 -  -3.9  -3.60627   GCAGGTCAGTGTAAA            CATTGACC ATCC GG-CAATG             TGAGCCAACCGGATG  53 58
SH08_RS12480 2514790 .. 2514808 - -14.6  -4.74103   CTGTGAAGTGAAAAA             TGGCGCAC ATT GTGCGCCA             TTTTTTTTGTCTGCC 100 49
SH08_RS12465 2512010 .. 2512038 -   -14   -3.4945   ACTGAAGCAAGAATA        TCAGGATGAAGC TTACC GCCTCATCCTGA        ATGGTCATTTTACCA 100 30
SH08_RS12460 NONE
SH08_RS12455 NONE
SH08_RS12450 2508186 .. 2508202 -  -5.2  -3.54129   GACATCTCCCTGAAA              TTTCAG GGGTT CTGAAA              CTGCTCTACCTCGAA  57 11
SH08_RS12445 NONE
SH08_RS12440 NONE
SH08_RS12435 2505635 .. 2505652 -  -4.9  -4.62002   AGCAATTACAGAAAA             CAGGGGAT GAA ATCCC-TG             ATGTTGGCGAAGATT  72 231
SH08_RS12410 2501951 .. 2501974 - -13.9  -3.96841   CGCTAATAAAGACAA          GGCGCAACC TTCACG GGTTGCGCC           TGTATTTTTACGCAG 100 33
SH08_RS12400 2499674 .. 2499688 -  -4.2  -3.53224   GAGTGGCTCGCTAAA               GGCTAT TCT ATCGCC               CCCTCTCCGGGGGCG  52 49
SH08_RS12385 2495480 .. 2495492 - -10.5  -3.06796   CGTTATCTGATTGAA                CGCGG TCA CCGCG                AAATCGGCGTCATCC  72 510
SH08_RS12375 2494484 .. 2494518 -    -3  -4.96276   ACAAAAAAATGAAAA     TAACAAAAAGAGAAAA CAC TTTTGCCATTTTGCTA     ACAAACAGGAAGGAG  71 74
SH08_RS12370 2493153 .. 2493170 -  -9.1   -2.5955   AGGTCGGATAAGGCA             CTCGCCG CATC CGGCAAG              ATAAATCGCACGTTG  66 87
SH08_RS12355 2490823 .. 2490850 - -15.7  -3.09116   GGGATAGAGAAAGGA        CTGACGGATGC CCGTTC GCATCCGTCAG         TATTGCAGGACGGAT 100 40
SH08_RS12325 NONE
SH08_RS12320 NONE
SH08_RS12315 2481150 .. 2481173 - -10.2  -2.52516   CCCGTCATCATCAAC          CTGCCGCCCG TGAG CTGGCGGCAA           TTGTCTGGCGGCTGT  65 97
SH08_RS12295 2477459 .. 2477494 - -11.8  -3.90744   CTCCGCGCTAAATAA    GTTTGCGTGTGGTCAG GTTA CTGACCACACGCCCCC     TTCATTTCACCCTTT 100 32
        anmK 2475588 .. 2475601 -  -2.4  -3.63367   CGCGGTAAGAAAAAT               TCAG TTAACT CTGA                TATCACGGGTTAGCG  49 28
SH08_RS12280 NONE
SH08_RS12275 2474443 .. 2474455 -  -3.4  -3.77196   GTACCAGCGATTAAA                GCAA GATTT TTGC                ATCTTTTCAGGGTGC  53 32
SH08_RS12270 2473017 .. 2473046 - -10.7  -4.82901   TTCCCTGTATAAAAA       CCAGGGGGAGTGA TTTC TCACTCCCCCTTT        CCACTTAATGCATTA 100 38
SH08_RS12265 2471768 .. 2471778 -  -5.4  -4.36914   TTTCCCGCTATAAAA                 CCAT CGA ATGG                 CTGAATTACATCGCC  70 384
SH08_RS12195 2460347 .. 2460380 - -15.5  -3.33696   GTCGCCGCGAAGTAA     CAAAATGGATGGTGC AAAT GCACCATCCATTTTT      CATGCAAGGCACAAA 100 25
SH08_RS12175 2455186 .. 2455202 -  -5.1   -5.3104   TCAGTAAAAATAAAA              GGCAC CGCCTGT GTGCC              ACATTTTTTATCATT  84 87
SH08_RS12170 2454238 .. 2454249 -  -5.8  -3.01924   CATTGCTGTTGAATA                GTGC GAAG GCAC                 ACTCTATTCGTATAC  54 161
SH08_RS12165 2453405 .. 2453420 -  -5.4  -3.72078   CCATAAAATAAGCAA              CCGAAC GTTC GTTCGA               GCGTATTGGGAACGA  59 179
SH08_RS12160 NONE
SH08_RS12155 NONE
SH08_RS12150 2448667 .. 2448690 - -13.9  -3.72051   GTCAACAATCTGAAA          CGCCGGAGA TTTTTC TCTCCGGCG           TTATTTTTTACTTCA 100 33
SH08_RS12135 2443821 .. 2443836 - -11.8  -5.47218   TGCCATGTAAAAAAA              CCGCCC CGAA GGGCGG               CTCTGTTTATTTCAC 100 32
        fumC 2442207 .. 2442236 -  -4.3  -3.55444   TGGTGAGTTGTTAAA       TTACGATGCCG-AC AAT GTGCAGCACCGTTA       TAAACCTCAGGCGCA  53 86
SH08_RS12110 2438724 .. 2438744 -  -8.3  -4.06419   CCTGGCGAGAAAGAA            GTGATCGAC CTG GTCGATTAC            TTACTTACCAGTTGC  77 88
        pntA NONE
        pntB 2432056 .. 2432081 - -13.3  -3.69068   CGATCTCAATAAAGA         GTGACGGCCTC AGCA GAGGCCGTCAG          GGTTACAGAGCTTTC 100 28
SH08_RS12075 NONE
SH08_RS12070 2429902 .. 2429925 - -15.3  -3.65722   AAAATAATGTTCAAA          CGCTGCCCG ACAGCG CGGGCAGCG           TCTTCATCAGGCAAG 100 32
SH08_RS12045 NONE
SH08_RS12040 2424379 .. 2424399 -  -3.3  -3.16345   AACCAGGAAAATAAT            TAACCTTGA AAG TCTAAGTTA            TGCTTTCCTGGCCCA  46 82
SH08_RS12035 2423568 .. 2423592 - -15.8  -2.93585   TGATATGTGAAATGA          CCGGGGAGTA TCAGC TACTCCCCGG          TTTATTGATTGCCTG  95 69
SH08_RS11995 2413564 .. 2413586 -  -8.4  -2.89565   AATTTCAGATAATTA           TCTCCCCGGA GTA TCAGGGGAAA           GGTCTGGCAACCCGT  61 298
SH08_RS11980 2412359 .. 2412372 -  -2.3  -3.99153   TGATCACAAAAAAAG               GCGTA TATT TGCGC                TGTGAATGGTTGACA  53 112
SH08_RS11975 NONE
SH08_RS11970 2409578 .. 2409597 -  -4.2    -4.431   GACGCAGCGATAAAA            CG-TGCCGG ACT CCGCCATCG            AAAATCATATCAGTC  66 436
SH08_RS11955 2407248 .. 2407270 -  -9.9  -2.86049   CAACAAGGGAAGAAG          GCGCTGTGGC TGTA GCCACAGC-C           ATTGAAGCTGGCGAC  72 164
SH08_RS11940 2405803 .. 2405828 -  -7.5  -4.24963   CACAATCATGGAAAA         GGCTTACGAAG AATA CTTCGAAGGCC          TTGCCGAAGGCGAAG  75 354
SH08_RS11920 NONE
SH08_RS11915 2404077 .. 2404114 -  -4.2  -3.24447   GACAGTCCACAAAAC   TGCCAACTTCCGCT TCTTGCTCTT AGCGGACATTAGCA    TAGGCTATTTACCAT  51 362
SH08_RS11905 NONE
SH08_RS11900 2402415 .. 2402428 -  -2.4   -2.9732   TGTCAACGCAAAGCA               GAAG TGTCAC CTTC                GGTGCGAAACAGAGA  42 55
SH08_RS11895 2402147 .. 2402160 -  -9.5  -5.77734   AAATAAAAACAAAAA               CCCGC CGAA GCGGG                TTAAGTGCGGGTGCG 100 96
SH08_RS11890 NONE
SH08_RS11885 NONE
SH08_RS11880 NONE
SH08_RS11875 2399468 .. 2399499 - -12.4  -3.64822   ATTGCCCCATTTAAA      GCACAAAACCCGCT CATC AGCGGGTTTTCTAC       TTTTTCTTAACGTCG 100 127
SH08_RS11865 2398153 .. 2398166 -  -9.5  -5.60689   GCAGATAATAAAAAA               CCCGC CTGA GCGGG                TTTGAGATTGTGGTG 100 310
SH08_RS11860 NONE
SH08_RS11855 NONE
SH08_RS11850 NONE
SH08_RS11845 2395910 .. 2395920 -    -4  -4.03413   ACTGCTTCAGATAAA                 TTTG TAA CAAA                 CCAGAACACCATTAA  59 247
SH08_RS11840 2395346 .. 2395359 -  -8.1  -5.31059   ACACCAAGCAAAAAA               GCTCC CGAA GGAGC                CTTCATTTTCACTTT 100 233
SH08_RS11835 2394972 .. 2394982 -  -5.4  -3.95836   ACGTGTAAAAGATAA                 GATG AAA CATC                 GCAATAATCAACATA  63 109
SH08_RS11830 2394676 .. 2394691 -  -6.8  -4.95302   TCAAATATAACAAAA              CCCCGT AAAA ACGAGG               TTTATGGATAAATTT  86 55
SH08_RS11815 NONE
SH08_RS11810 NONE
SH08_RS11805 2391332 .. 2391344 -  -3.4  -4.78477   ACATATAAAAAATAA                TCTC GGTGT GAGA                TGCTTTACGTCTTCC  68 103
SH08_RS11790 2388082 .. 2388105 -  -9.6  -5.16841   TTATATGAATAAAAA          TCCCCTCTCC GGTA AGAGAAGGGA           TTAAGGGTTTACAGA 100 34
SH08_RS11785 2386448 .. 2386458 -  -6.8  -3.73224   TGACCGCTGAGCAAA                 TCCG CCG CGGA                 AAAACCGTAGTTGTT  66 132
SH08_RS11765 2382409 .. 2382437 - -13.2  -2.83271   TTACTGCTATAACCA        GGCTGGCCTG GCGATATCT CAGGCCAGCC        ATTGGTGGTGTTTAT  91 37
SH08_RS11755 2381178 .. 2381207 -  -8.6  -2.50779   AGCATAACCCAATAC       CCTAATGGCCCA GTAGTT CAGGCCATCAGG        CTAATTTATTTTTAT  63 37
SH08_RS11750 2379939 .. 2379956 - -10.5  -5.76949   GACGGCGAAAAAAAA             CCGCCAG TAAA CCGGCGG              TGAATGCTTGCATGG 100 143
SH08_RS11735 2377080 .. 2377092 -  -7.7  -3.08522   CAGCTAGTTGAAAAC                GTGAC AAC GTCAC                TGAGGCAATCATGAA  63 285
SH08_RS11715 2375340 .. 2375353 -  -9.5   -3.6707   ACGCAATAGTTGAAA               GGCCC ATTC GGGCC                TTTTTTAATGGTACG  78 30
SH08_RS11695 NONE
SH08_RS11690 NONE
SH08_RS11685 NONE
SH08_RS11680 2367948 .. 2367964 -  -5.9  -2.52896   TCATGGTTTAATCGA              GGAAAAA CGC CTTTTCC              TGGATCATAAAGTGG  52 83
SH08_RS11675 2366309 .. 2366324 - -10.4  -4.56978   TGGTGAAATAAGAAA              CCCGGT CGAA ACCGGG               TTCAGAAGTAACGGT 100 45
SH08_RS11665 2365141 .. 2365154 -  -6.7  -3.03771   TCAGATGCTGGAAGA               GCAGT ATCC ACTGC                AAGAGAACGGACAGA  56 94
SH08_RS11625 NONE
SH08_RS11620 2355694 .. 2355727 -  -6.1  -4.72333   AACTATACTCAAAAA     CTAACAGCCACGGTCA TCA TGAT-GTGGCTGTCAA     TGAAACTATAACCCA  77 31
SH08_RS11615 NONE
SH08_RS11610 2349747 .. 2349771 - -14.3  -3.36452   AGTCGGCAATATTAA          GCCGCATGCCA TCT CGACATGCGGC          TTATACGGTTTACCA 100 35
SH08_RS11605 NONE
SH08_RS11600 2347686 .. 2347697 -  -5.8  -2.62158   TTAAATAAGTAACAG                CACC CTCT GGTG                 TTTTCGTATGCAGTG  52 299
SH08_RS11595 2347114 .. 2347143 -  -5.7  -2.71731   TTGACGGTGTAACCA       CTCATTCGACTGT AGGC ACTGTCGGATAAG        TTATAAAAACCTTGC  52 356
SH08_RS11590 NONE
SH08_RS11585 NONE
SH08_RS11580 NONE
SH08_RS11575 2343697 .. 2343712 -  -7.6   -3.6164   AACATGGATATATAA              GAGTAG GGGA CTACTC               TCTTTCTATTTTTAA  70 250
SH08_RS11570 2341280 .. 2341310 - -12.8  -3.28537   ATAGTCAATGAGGAA       TTCTTCTGCTGT GCGGATG ACAGCAGAAGAA       ATGAGAAGAGGCATT 100 39
SH08_RS11565 2340820 .. 2340836 -  -4.5  -4.08767   TTTATCTCCTTAAAA              CAATAAA GTT TTTATCG              ATACTTTTTTAACAT  63 68
SH08_RS11560 2339973 .. 2339995 -  -8.4  -2.53831   CGCCTAAAAACAACG           CGGGGCAG GGAATGG CTGCCCCA           TTTAATTCTTACGCA  63 73
SH08_RS11555 2337927 .. 2337946 -   -15  -2.76815   ATCTCGCTCAATAAG            GCGGCGGA AAAA TCCGCCGC             ATGAAGGTTTAGTTA 100 38
SH08_RS11550 2336671 .. 2336696 - -10.5  -3.80841   ATGATGATGACGAAA         CACCCGACA GGAATTTA TGTCGGGTG          CCTTGTTAAGGTCAT  86 79
SH08_RS11545 NONE
SH08_RS11540 2332327 .. 2332344 -  -6.2  -4.13945   ATCTCCATGCGAAAA             CCGGGC GAATTT ACCCGG              TTAAGTAAAATCCGA  69 45
SH08_RS11535 2329493 .. 2329517 - -13.6  -3.08201   GAATATTGCTAAAAT          CCCCGCCAAC GATGT GTTGACGGGG          CTGTTATTATTTTGG 100 32
SH08_RS11530 NONE
SH08_RS11525 2327714 .. 2327743 - -15.1  -3.57387   AACAGACTTTGGAAA       TTGTCCCGAAACG GGTT CGTTTCGGGACAC        CGTTACCGTTAAACG 100 44
SH08_RS11520 2326023 .. 2326045 - -13.5  -4.81685   AGCAAGCACGAAAAA           GGGAGCGAT GAATT ATCGCTCCC           TTGTCTTATAACCAT 100 51
SH08_RS11515 2324567 .. 2324605 - -11.8  -3.07962   TGGGATAGTTTAAGA   GGGTAACAAGCCGGTG GGTAAAG CACCGGCTTGTTACAA   AGTAAGAATGGGAGT  86 41
SH08_RS11510 2322882 .. 2322893 -  -5.8  -3.40597   TGGCGCATCTAAAGA                CTGG CTTT CCAG                 AGTTCAACACGGTTT  59 7
SH08_RS11505 2320425 .. 2320438 -  -9.5  -4.55798   CACGTTAAATGAAAA               CCCGC GAGT GCGGG                CGAGAGGAATTTGTC  95 39
SH08_RS11500 NONE
SH08_RS11495 NONE
SH08_RS11490 NONE
SH08_RS11485 NONE
SH08_RS11480 2315146 .. 2315156 -  -5.4  -2.80612   CGTAACGTTAATAAC                 GTGT CAG ACAC                 TTATAACCTCCTGCT  50 18
SH08_RS11475 2314139 .. 2314151 -  -3.3   -3.6682   TCTCAGGTACTGAAA                GCGGA AAT TACGC                TGGATTACCAGTTGA  51 104
SH08_RS11465 2313121 .. 2313132 -  -5.8  -3.32946   GTTTTAAGGACAACA                TCGC CGTA GCGA                 AGAAACACGTGCTAA  57 76
        rpsV 2312890 .. 2312911 - -13.1  -5.71295   AGATAAAAACAAAAA           CACCATTGC GCAG GCAATGGTG            TTTAATCGTCATTGA 100 58
SH08_RS11455 2311061 .. 2311084 - -14.6   -3.4404   AGGGAGAGGGAAATA          GCCCGGTAGC CTTC ACTACCGGGC           GCAGGCTTAGATGGA 100 32
        adhP NONE
SH08_RS11445 2309356 .. 2309407 - -10.3  -2.63257   ATTGTAGACAACGTA GGCTTTGTTCATGCCGGATGCGGCG TGAA CGCCTTATCCGGCATGA--AAACCC TTCAAATCCAATAGA  74 135
SH08_RS11420 2303379 .. 2303401 - -13.4   -3.1706   AATTTATCTGATTAA           CTACCGGGCC GTA GACCCGGCAG           TTATTTTAACCACGA 100 31
SH08_RS11415 NONE
SH08_RS11410 2301485 .. 2301506 -  -3.1  -3.54436   CAGACACTTATAGAA           TTAGTGA TGATTTAT TCACTAA            AAAGGCCATGAACTG  49 22
SH08_RS11405 2299717 .. 2299731 -  -6.4  -2.66964   TTACTCATGACATGA               CTCCTG CTC CAGGAA               TGAATTGGGATCTGA  54 85
        narZ NONE
        narH NONE
SH08_RS11390 NONE
        narI 2292981 .. 2293003 -  -6.2  -3.14132   CTGCGGTTTCATTAA           CGTTCTCCTG TGA CTGGAGAACT           ATCATAGCCTGCAAG  57 78
SH08_RS11380 2292040 .. 2292058 -  -2.3   -2.6927   ATCCGGCATACATTA             GCCCGGT TGTAG ACCTGAC             AGGCGAAGCGCATCA  40 51
SH08_RS11370 2290225 .. 2290238 -  -8.1  -5.31855   GACGAACAACAAAAA               GCAGC ACTT GCTGC                AGATATTACCGACGT 100 188
SH08_RS11330 2281376 .. 2281388 -  -4.8   -3.6682   GCCGACTCATCCAAA                CAGC CTGGC GCTG                TCTGCCGATGGCAAA  55 237
SH08_RS11320 2278053 .. 2278072 - -11.4  -4.06903   AATCGTTAAAGTAAA            TGCCCGGC AAAT ACCGGGCA             TCAAGGTAATTACTC 100 35
SH08_RS11305 NONE
SH08_RS11300 2274594 .. 2274609 -  -7.6  -3.40403   TCTTTCTCACGATAA              GAAACG CATC CGTTTC               TTAAGCGCCTTTCTG  62 417
SH08_RS11240 2265908 .. 2265947 -  -7.8  -2.79831   TGAATCTGCATGATA  TTGCCTGCCGGGTAAGGCG TTA CGCCGCATCCGGCAT-CAA  ATGACTCAACGTTGT  61 31
SH08_RS11225 2261968 .. 2261985 -  -9.9  -2.94888   AACCCACCGAAATGA             TTCAGGC GACA GCCTGAA              CGTAGCAGGGATCCA  73 64
SH08_RS11215 2260296 .. 2260315 -    -7  -4.07568   CGGTGCGCCGTAAAA            CCCCATCC TTCA GGGCGGGG             ATATAAGGCGCGGTT  70 191
SH08_RS11190 2256471 .. 2256499 - -12.5  -3.28791   ATGTCGGGTGGACAA        TCCGCAAAGCAAC CAG GTCGCTTTGCGCA        ATGGTTTTATCCTTG  83 115
SH08_RS11175 2255050 .. 2255067 -  -2.6  -4.30719   GGCTGGTATAACAAA             CGCCCA AGTCTG TGGGTG              GAACCGCGTAACAAG  60 510
SH08_RS11160 2251244 .. 2251259 -    -9  -2.75229   GAAAATGTTCAAGGA              GGGATC GACA GATCCC               TTCACCTTTCAGAAC  67 34
SH08_RS11150 2249014 .. 2249036 - -14.8  -3.65199   AATCTGCTAGTCAAA           TGCGCGGGGA AAA TCCCCGCGCT           TGCCCTTACCTGGAC 100 31
SH08_RS11135 NONE
SH08_RS11130 NONE
SH08_RS11125 2246803 .. 2246824 -   -13  -3.43853   TTAATGAGTGAAAGA           GGCGGAGG TTTTTT CCTCCGCC            TGTGCGCGTCAGAGT 100 34
SH08_RS11105 2239363 .. 2239376 -  -2.3  -3.27498   TACAGTCCACATCAA               GACCG TGTC CGGTT                ATGCAGAAACAATGC  45 24
SH08_RS11060 NONE
SH08_RS11055 2224553 .. 2224567 -  -7.1  -4.58466   TTGATAAGGATAAAA               CCGCA GACAA TGCGG               CGGAATATTTCTTCG  77 499
SH08_RS10980 2208683 .. 2208704 -  -7.3  -4.90778   CTTAGTGAAATAAAA           GGGCAAC TATTCGCC GTTGCCC            TTCATTCACCGATTA  85 38
        tynA 2206163 .. 2206177 - -11.4  -5.32944   CTCATAAGTAAAAAA               CGGCAC CTG GTGCCG               TTTTTTTGTCTGAAA 100 44
SH08_RS10965 2203467 .. 2203493 - -15.3  -3.33815   ATCTGTTTTAACTAA         TTGGCGTTGCA GTACA TGCAACGCCAA         TTAGTTAGCGGAATT 100 30
SH08_RS10945 2198944 .. 2198966 - -14.9  -2.74012   GGATTATCTGAATCA           GCTCCCCTG GAATG CAGGGGAGC           GGCAAGATTAAACCA 100 33
SH08_RS10940 2198082 .. 2198097 -  -4.6  -5.27769   ATAAAAAAGTAAAAA              TGCGGG GCAA CGCGCA               GGACAGCTCTCGACG  82 369
SH08_RS10930 2194323 .. 2194342 - -11.4  -4.16226   CATATAAAAAGACAA            GCCCGAAC AGTC GTCCGGGC             TTTTTTTTTAGAATT 100 63
SH08_RS10925 2192853 .. 2192871 - -10.2  -5.03945   GAATAAGCAGAAAAA             GCCCGCCA TAA CAGCGGGC             AGGAGGATTTAGAAC 100 34
SH08_RS10920 2192278 .. 2192297 - -10.7  -4.95957   GAAATGAATCAAAAA            GCCCGCA GCAATG TGCGGGC             GTTAGTGTCAGCGCA 100 33
SH08_RS10915 2190941 .. 2190951 -  -2.6  -2.77118   GAGACCCAAAATCGA                 TTTT GTG AAAA                 ATGGCTTTAACTCGG  42 185
SH08_RS10910 2189932 .. 2189948 -  -6.5  -5.80003   GGAAGAAACAAAAAA              CAACCTG ATG CAGGTAG              CCAGTGAGCATATTG 100 281
SH08_RS10895 2186537 .. 2186549 -  -6.9  -3.48276   CGCGGTGGCACAGAA                CACGG CAG CCGCG                AAGAAGTCAGCCAGT  63 142
SH08_RS10890 2185926 .. 2185938 -  -3.3  -4.19238   TTCCCAAGGGGAAAA                CGCAC GAC GTGCT                GACCGGAAGTGATGA  60 192
SH08_RS10880 2184818 .. 2184829 -  -5.8   -2.7927   AAACACATCGAATCA                GCCT ATTT AGGC                 TATTTTTTCCACCAT  53 62
SH08_RS10815 2176851 .. 2176870 -    -2  -3.90744   GGGGGGGTTAAATAA            CGGAATCC AGGA GTTTTCCG             TCAGACCATATAAGT  51 41
SH08_RS22970 2176089 .. 2176110 -  -7.4  -3.64822   ATCGCTGTATTTAAA           GATTTCCT TAAAAC AGGAAATC            TTATTATCACTTCTC  66 192
         kil NONE
SH08_RS10800 NONE
SH08_RS10795 NONE
SH08_RS10790 NONE
        recT 2171067 .. 2171107 -  -8.3  -5.24129   TTTTCTCATAAAAAA  TATTTCAAGTTGGCGGTGC ATT ACACCGCCAGGCTGAATTA  TTCCTCTGAATTATC 100 23
         lar NONE
SH08_RS10775 NONE
SH08_RS10770 2170101 .. 2170111 -  -3.2  -4.04318   TCCAGATATCACAAA                 GCTC TCC GAAC                 GTTTTTATGACTCTC  56 272
SH08_RS10765 NONE
SH08_RS10760 2168100 .. 2168123 - -14.6  -2.80074   GCCTCCATAAGAGTA          GCCCGATACG CTTG CGCATCGGGC           GCTATCCTGGTTATT 100 36
SH08_RS10740 2163611 .. 2163621 -  -2.4  -4.21194   TCGCACTACGTAAAA                 CGGC GCA GGCG                 AAGCAAGAAAACTGG  58 88
SH08_RS10730 2162786 .. 2162814 - -12.5  -5.63504   AACTGCATAAAAAAA        TAGAGTCTGTCGA CAT CCGCCAGACTCTA        CAGTACACACAGCAG 100 53
SH08_RS10720 2160383 .. 2160395 -  -3.3  -2.94099   TTCCTGCATCAGATA                CCTCG CGT CCAGG                GAAAATTGAGCGCGG  44 6
SH08_RS10715 NONE
SH08_RS10710 NONE
SH08_RS10705 NONE
SH08_RS10700 2156777 .. 2156794 -  -8.5  -4.14739   CTATCTATTTGAAAA             CCCTTAA GTTG TTAAGGG              TAACTTTACATAAAA  79 73
SH08_RS10695 2155825 .. 2155873 -   -12  -3.23638   TGAAACAGTGATGAA CCTTCTGCCAGATCAATAAATC AGAAA AATTTAATGATATGACAGAAGG ATAGTGAGTTATGCG  86 47
SH08_RS10690 2154752 .. 2154773 - -10.1  -5.30155   GCAGTAAGTAAAAAA           TAGGCCCGA TAAC TCGGGCCTT            GTCAGTTATTGAAGA 100 45
SH08_RS10675 2151788 .. 2151810 -  -3.5  -3.63589   GAAAATACCGTTAAA          GCG-CGTAAT GCCG ATTACAACGC           GGCAGAAAAAATCCT  53 227
SH08_RS10655 NONE
SH08_RS10650 NONE
SH08_RS10645 2146660 .. 2146684 -  -4.1  -3.62597   GCGATGCTTGAACAA          CCGCTTCCTGC GCA GGACGATGCGG          CGCTGGAGAATTTTA  53 332
         tpx 2145392 .. 2145418 - -19.6  -3.06737   GAGTAAGCGCGAATA         TGCCTGATGGTG CAA CACCATCAGGCA         TATTAAATTATGCTT 100 33
SH08_RS10615 2140025 .. 2140066 -  -6.5  -3.92373   TATCCGATCTATAAA TGTAGGCCGGATAAGATGC GCTA GCATCGCATCTGGCATTCA  GGCAAGGTAGCTGGT  67 43
        pspF 2123792 .. 2123810 -  -2.3  -4.54047   CGATTGCACAGAAAA             TCCAGCA ACGCG CGCTGGC             GCAGGGGCTGCTCCT  63 272
SH08_RS10500 2116598 .. 2116609 -  -7.2   -4.0031   AGGCCGATGAAACAA                CCCC GCAA GGGG                 TATTACGCGTTTTTC  72 28
SH08_RS10495 2114874 .. 2114915 -   -16  -3.12351   TCTTTTTATAGTTAA TGGCGCGGCGCGTTACCCT CAGGC AGGATAATGCGCCGCG-CA TCCGACTATTACGTT 100 34
SH08_RS10490 2114514 .. 2114525 -  -2.2  -3.31144   GCTTTATCCGGACAA                CGAT ACTG ACCG                 ATCGTCTGCAATTAA  45 45
SH08_RS10485 2114279 .. 2114290 -  -2.2  -3.20348   CTTACTAATATTTAA                TGAC ATTT GCCA                 TTACCGTTTGTGTTC  43 10
SH08_RS10480 NONE
SH08_RS10475 NONE
SH08_RS10470 NONE
SH08_RS10465 NONE
SH08_RS10460 NONE
SH08_RS10455 2108401 .. 2108413 -  -4.8  -3.72374   CCCCAGCAACAAACA                GGCT CATAC AGCC                CCTAACCCTTTCATG  57 141
SH08_RS10450 2107334 .. 2107354 - -12.5  -3.71149   GTATAACAGAGATAA            CGGGCGGCA GAA CGCCGCCCA            TCTTTACCAACAGAA 100 44
SH08_RS10445 2106061 .. 2106094 -  -5.2  -2.78384   TTGGTGGCCATTAGA     GCGGCTGACAGTTT TACGCG AATCTGTCTGACGC      GGCAAGGTTAATATG  50 33
SH08_RS10440 2104065 .. 2104089 - -13.6  -4.42062   GAGCGGGGAAATAAA          CGGCCCATCC ATGAG GAATGGGCCG          TGAAAGGAGATTACG 100 36
SH08_RS10430 2101778 .. 2101808 -  -2.7   -4.8143   TGAATAATGCAAAAA       TTGCCGCTAAA AGAGAAGTG TTTAACAGCAA       CGGCTAATTATCATC  67 96
SH08_RS10425 2101542 .. 2101582 -  -3.2  -4.49756   CCTCAAATAGGAAAA  CCTGAAGGCACGATTG TTAAATCTC CCACGGTGCCTTCGGG  ATGTCTGGCGTAGAT  63 1
SH08_RS10420 2100542 .. 2100555 -  -3.8   -2.7263   ATTATTCCGTGAAAT               CTGC TCGCGC GCAG                GGTTATATCACGCAG  44 189
SH08_RS10415 2100115 .. 2100134 - -13.6   -5.0916   CGGTTAACATAAAAA            GCCACGGA TATA TCCGTGGC             TTTCGAATATTTTAC 100 123
        ribA 2095635 .. 2095669 - -11.6  -2.98947   TTGAAGTAACAACTA     TTTGCTTGCCGG TTATTTTGCTT CCGGCAAGCAAA     TGAATTACACAATGC  83 48
SH08_RS10375 2092477 .. 2092494 -  -3.4  -4.41087   ACAATGAAACAGAAA             CGAAAC GGGAAT GTTCCG              TCGTTATTCCAGACG  62 185
SH08_RS10345 2087512 .. 2087531 - -11.4  -4.46775   GATGTAAAAGACAAA            CGCGAGGC TAAG ACCTCGCG             TTTTGCTTTAATCAA 100 33
SH08_RS10335 NONE
SH08_RS10330 NONE
SH08_RS10325 2084858 .. 2084878 -    -9  -3.02166   CGGTTAATCAAAGTA            TGCCGGAC GTCAT ATCCGGCA            TTTTTACAGATTAAT  68 36
SH08_RS10300 NONE
SH08_RS10295 NONE
SH08_RS10290 NONE
SH08_RS10285 NONE
SH08_RS10280 2073509 .. 2073531 - -11.2  -4.45261   TAAAGAAAGTTAAAA           TGCCGCCAGC GGA ACTGGCGGCT           GTGGGATTAACTGCG 100 32
SH08_RS10275 2072913 .. 2072934 - -13.7  -2.94144   TCTCCAGTGAAATCA           CTGCGAGCC ATAC GGCCCGCAG            ATGCAATTATCTTTA 100 69
SH08_RS10270 2072353 .. 2072371 -  -2.4  -3.16914   ACGATTCATGAAAAT             GTCCTCTT TAT AAAATGAC             TAAAAGTTAAAATTC  43 46
SH08_RS10265 2071794 .. 2071816 - -14.2  -4.84017   AATTCCGCACAAAAA           CGACCCCGTA ATA TACGGGGTCA           ATAAGGACATGGTAT 100 49
SH08_RS10255 NONE
SH08_RS10250 2069387 .. 2069421 - -10.8  -4.22948   AAAACCGACTTAAAA     GGAAAATCACAGGCGC GAT GCTACTATGATTTTCC     TGAGGAGAACAGAGG  93 77
SH08_RS10245 2068938 .. 2068967 - -19.5  -4.08144   TTCAGTAAGCAGAAA       GTCAAAAGCCTCC GACC GGAGGCTTTTGAC        TATTACTCAACAGGT 100 28
SH08_RS10235 2067650 .. 2067668 -  -8.9   -4.1023   AAGGCCAAACAAGAA             CACGGTT GCAAA AACCGTG             CCCTTAAATATTGAA  83 48
SH08_RS10230 2066089 .. 2066111 -   -12  -2.67958   CAATATCTAAATGTA           CTGGGCACCA TTG CGGTGCCCAA           TAAGTTTACTCTTCC  83 52
         cls NONE
SH08_RS10215 2063894 .. 2063925 - -10.2  -4.57073   GATCCGCTTTAAAAA      CAATAAGGGCTGAC AGTT GTCAGCCCTTTTTC       ACGCTAAAAGCGATT 100 43
SH08_RS10180 2053651 .. 2053672 -  -9.4  -4.77567   AGTGGCATAAGAAAA           CGGCTCCC TGTTGT GGAAGCCG            TTATAGTGCCTCAGT 100 120
SH08_RS10175 NONE
SH08_RS10170 2052724 .. 2052740 -  -2.1  -4.45696   GGTAAACAAAAAATA              CGGCCCC AGA AGGGCAA              TGCCGTTCACTTAAG  60 32
SH08_RS10160 2050786 .. 2050802 - -13.7  -5.55769   CCGGACAATAAAAAA              TCCCGCC GCT GGCGGGA              TTTTAAGCAAGTGCA 100 53
SH08_RS10140 NONE
SH08_RS10135 2046111 .. 2046124 -  -3.9  -4.00042   CTGGCGATTAAAGAA               TAATC GTTC GATTA                CCGTAAACAAAGACG  58 4
SH08_RS10130 2045838 .. 2045851 -  -6.7  -2.55015   ATCTCACCGAAGTTA               CCACA TCGC TGTGG                TGAATTATGGTGGTG  55 33
SH08_RS10125 NONE
SH08_RS10085 NONE
SH08_RS10080 2033406 .. 2033449 -  -3.8  -3.65812   GGTGGTGGAAGATAA CCAGGGGCAGCGTG-TCTCCT CCA ATGAGATCACGCTAACGCTTG TCGAACCGTTCGATG  53 76
SH08_RS10070 2031128 .. 2031151 -    -6  -2.64144   CTTGCACTGAAAGAG          GGCGGACGC ACCACAG GCGT-CGCC          TATCGACTGCCAGAA  50 441
SH08_RS10055 2029033 .. 2029061 - -12.5  -2.67209   CAGGAATTTATATTA        TCTCCCCCGATTA CCG TCATCGGAGGAGA        TATAACTGTCAGGCA  88 34
SH08_RS10050 2028482 .. 2028509 -  -9.8  -5.24799   TGATAAAGACAAAAA        TGGCCGCAGG CTGTTACC CCTGCGGCCG         GTTTCGGGCGCATAT 100 74
SH08_RS10045 2027949 .. 2027974 - -13.3  -5.36441   GCCGGATACAAAAAA         GGCCGCAGG CTGTTACC CCTGCGGCC          GGTTTCGGGCGCATA 100 75
        lolB NONE
SH08_RS10005 2020848 .. 2020862 -   -10  -3.62522   CAACGTCTGGAACAA               GGTGAC GTT GTCACC               GAAACTCAGCTTGCC  80 45
SH08_RS10000 2019752 .. 2019765 -  -9.5  -5.76633   TTACAGACAAAAAAA               CCCGC CGCA GCGGG                TCTTTGAGCCGGGTT 100 44
SH08_RS09995 2017662 .. 2017683 -  -3.7  -3.48629   ATGAAACGCAAAAAC           GCTTCGTTAC TCG GTAACGT-GC           TCATGGGGTTGGGTC  51 322
SH08_RS09985 2016698 .. 2016721 -    -9  -2.80499   TAATATCTTAATAAT          CAACCTGTTA TTGC TAACAGATTG           CAGAAATGGAAATAA  67 89
        ychF 2015499 .. 2015516 - -11.3  -4.98531   CGGTGAAATGAAAAA             TCCACGC AATT GCGTGGA              TTTTATATACTTTTG 100 86
SH08_RS09970 2011846 .. 2011860 -  -7.2  -3.44848   GCCGGGTATGAAAGA               CAGAAA CGA TTTCTG               ATACATCAGAGTGAT  66 106
SH08_RS09960 NONE
SH08_RS09955 NONE
SH08_RS09950 2006513 .. 2006546 -  -9.7   -2.8372   TAGTGCTGAGTAAAT     TG-CCGGATGACATCA GAA CGATGCCATCCGAACA     GTGGCTTAACCCTGA  72 31
        treA 2004464 .. 2004475 -  -4.4  -5.24129   TCTGTGTAGAAAAAA                CCAT AGCT ATGG                 TGTTATCTGCCGACA  78 211
SH08_RS09930 2002172 .. 2002182 -  -4.6  -4.02253   CCAATAAGCCAGAAA                 GCCG GTG CAGC                 CTGGGGCGTCGATCC  62 493
        ldcA 2000967 .. 2000988 -  -2.2  -4.03234   TGTCTCTTATATAAA           CCCTACCA TATTAG CGGCAGAG            ACAGCGTTTTACTTA  53 60
        cvrA 1998915 .. 1998937 -  -7.8  -2.78816   CCATTGCCCATGATA           GTGTCCAT TAAAAGG ATGGACAC           TATTTCCCCGGAACC  61 280
SH08_RS09900 1994537 .. 1994552 - -10.4  -4.00532   CGTTTAAAGAGCAAA              CCCCTC AAAC GAGGGG               TTTTTTGTTGTTTTT  89 39
        nhaB 1992003 .. 1992022 - -13.6  -3.92659   GGGCGAAAAGGCAAA            CCGGGCAT TTAT ATGCCCGG             TAAGTTGTTATCAAA 100 36
SH08_RS09885 1991332 .. 1991349 - -12.7  -5.14965   AGCGGCAGGAAAAAA             GCGCTCC CGCA GGAGCGC              CGAATGGATTAGCGA 100 34
        hlyE 1988226 .. 1988266 -    -7  -3.28791   AGCGCTCTGTCATAA  TGAGAGTTACCCGATA CCTTATTAT CAACAGGTAACTCTCA  ATCTTTAAAAAACGT  61 100
SH08_RS09845 1985655 .. 1985671 -  -2.3  -4.10855   AAAAGCCGCTGAAAA              CTTACAA TCA TTACAAG              GCTACGATCCCAGCG  56 283
        minC 1984247 .. 1984267 -  -3.3  -3.29973   TTAAAAAGGGATCAA            TTTAACGGT TGA ACGGTCAAA            GCGTTTTCGACTAAC  47 1
SH08_RS09830 1983406 .. 1983422 -  -3.7  -3.37464   CGAGTAATGCCATAA              CTTATCC TCC GAACAAG              CGTTTGAGGAAGCCT  49 10
        minE 1983085 .. 1983112 -   -15  -4.76041   GAGAGGGATGAAAAA        CTCAAGGCAGAG ATAA CTCTGCCTTGAA         GATAAATGCGCTTTT 100 50
SH08_RS09815 NONE
SH08_RS09810 NONE
SH08_RS09805 1981127 .. 1981149 -   -12  -5.08824   CCGTTAGCTAAAAAA           CCGCGTCG TATTCAT CGACGCGG           TACATATGAAATATT 100 39
SH08_RS09790 1977937 .. 1977953 -  -5.1  -4.13945   ATCCTTATTGCAAAA              CCCAG TACCGGG CTGGG              AGAAGTGCTTGTGAC  65 136
SH08_RS09755 1972968 .. 1973003 -  -9.3  -3.70109   TACACGACCCAATAA    TACTTTGTACAATAT ACGCTA AAATTGTACAAAGTA     TAAATAAGATTTCAG  78 144
SH08_RS09750 1971956 .. 1971969 -  -6.7  -3.17725   TTTGAAAAACAACGA               CCTGA TCCA TCAGG                ATAATAACCTCTTGT  59 242
SH08_RS09745 NONE
SH08_RS09740 1971325 .. 1971343 - -10.2  -3.71527   CGTTAAGTATTGAAA             CGGACGTG TGG CACGGCCG             TTGTTTTTATAAATA  82 80
SH08_RS09735 1970461 .. 1970479 - -12.4  -3.81137   TGTTAAATATTGAAA             CGGGCGTA TAA CACGCCCG             TTGTTTTATTTATGT 100 84
SH08_RS09720 NONE
SH08_RS09715 1967662 .. 1967713 -  -6.4  -3.17382   AACAACCAGACTTAA CGCTGTGCTGGATTACATTGACGC GGTG ACGGCAACAGATACCAGCACCGCG CCGGATGTCATCTGG  54 33
SH08_RS09660 1961090 .. 1961103 -  -8.1  -5.71983   TCAAGTATAAAAAAA               CCTGC CGAA GCAGG                TTCATAAACATTGAT 100 40
SH08_RS09655 1960425 .. 1960435 -  -2.6  -3.75617   AAAAAATTTGAAGAA                 TTAA TGC TTAA                 CTTTCTGTACCAGAA  52 225
SH08_RS09650 1958515 .. 1958551 -  -2.1  -3.32997   CGGTGAGAAATTCAA    TGTGGCGTTGAGATGCT TAA AGGTTCACAACGCTACT    TTGCTCCATCCTTTA  45 13
SH08_RS09640 NONE
SH08_RS09635 1955657 .. 1955672 - -11.8  -5.15969   GCGGAATGTAAAAAA              GGCCGC GAGC GCGGCC               CCTTCACATACATCT 100 81
SH08_RS09625 NONE
SH08_RS09620 1952656 .. 1952691 -    -4  -3.14647   ACTCACGACATTGAA    CTTCAAGGCGGCGT-AT TCT ATCACGCAGCCTTTTAG    ATGACACCCTTTGTA  49 22
        mnmA NONE
SH08_RS09610 NONE
SH08_RS09605 1949438 .. 1949467 - -12.9  -2.81326   GATAATCTTAATAAG       CAG-GCCGGACAGC ATC GCCATCCGGCACTG       ATACGAGGTTTATTT  91 35
SH08_RS09600 NONE
SH08_RS09595 NONE
SH08_RS09590 1945939 .. 1945965 - -15.2  -4.32201   GGAAGTAAGCGAAAA         GGGATGCGGCAT GTG ATGCCGCATCCG         GCTTAAATCCAAACT 100 40
SH08_RS09580 NONE
        potA NONE
        potB NONE
        potC NONE
        potD 1940613 .. 1940634 - -13.7  -5.26875   TTGCTAACTAAAAAA           CGGGCGGTA ATAC CACCGCCCG            CTTGCTGAATTAACG 100 35
SH08_RS09555 NONE
SH08_RS09550 1939290 .. 1939301 -  -7.2  -3.28712   TTGTGGGCCGGATAA                GGCG TTCG CGCC                 CCATCCGGAATAATA  64 64
SH08_RS09520 1932931 .. 1932948 - -12.7  -3.30701   GTTTAGCAAATTGAA             TCGCCCC GGCT GGGGCGA              TGGCTTAGCGGGAGT  95 30
SH08_RS09515 1929273 .. 1929284 -  -2.2   -4.1822   GGTTATTGTAATAAA                CAGA TAAG CCTG                 AATTATGGATGGTGA  55 120
SH08_RS09510 1928192 .. 1928211 -  -5.8  -4.11304   GTAATTTATAAATAA            GCATTAAC CCTC ATTAATGC             CTGCTACTGCTGATT  68 87
SH08_RS09500 1926606 .. 1926629 -    -3  -4.17491   AGGAAACGGTTAAAA          CACCGCGTCA GGAG TGTCGCAACG           TCACAGTGACCCATC  60 458
SH08_RS09455 1918189 .. 1918206 - -12.7  -3.25823   CGTTGGGGAGACTAA             GGCAGCC AGAT GGCTGCC              TTTTTTACAGGTGTT  95 43
SH08_RS09380 1904786 .. 1904833 - -11.8  -2.64194   TATAAACCTGATAAT GGGCGGTTGGCCTGATAAGGCG TTTA CGCCGCATCAGGCCGCCAGCAC CGATTGCCGGATGCG  83 66
         rne 1900004 .. 1900023 - -11.4  -5.69793   AGATGAAATAAAAAA            GCCCTGGC AGTT ACCAGGGC             TTGATTACTTTGAGC 100 47
        flgA NONE
SH08_RS09300 NONE
SH08_RS09295 1888245 .. 1888269 - -15.7   -2.6563   CGGTGTAACAATGCA          TTCCGGCCTGC AGT GCAGGCCGGAG          ATAATCTTCAGATCG 100 33
SH08_RS09270 NONE
SH08_RS09265 1882228 .. 1882259 - -12.2  -4.55016   AGAAAAAACTGAAAA      CGGCGGCAACCCGC GAAT ACAGGCTGCCGCGG       CGGGTCAGGATTAAA 100 36
SH08_RS09260 1881554 .. 1881569 - -11.8  -4.91852   TGCACGAAAAATAAA              GGGCGC GAAT GCGCCC               TCGTGATTAATCAGT 100 32
SH08_RS09255 NONE
SH08_RS09250 1880071 .. 1880086 - -11.8  -5.85244   AAGTAAAATAAAAAA              GCCGGG GCGA CCCGGC               AAAAAAAATCACTGC 100 44
        bssS 1879523 .. 1879539 -  -9.4  -3.74347   CCCAGAAATGGTAAA              GGCACC GGTGA GGTGCC              TTTTGGGTGGATGGT  81 50
        solA 1878302 .. 1878321 - -10.7  -4.57837   ATACTCCTGTAAAAA            CGGCCTC ATTCTG GAGGCCG             TAATGATGATTATTG 100 35
SH08_RS09235 NONE
SH08_RS09230 NONE
SH08_RS09225 1876729 .. 1876753 - -14.4   -2.9735   ACAGAATAAATATCA          TTGCCGGATG CGTGC CATCCGGCAA          CATTTCACGCTTACT 100 36
SH08_RS09215 1874418 .. 1874441 -  -7.4  -2.83233   TAAGCACACTAATTA          TGCGCCCGACT TCC AGG-GGGCGCA          ATCCAGAGAGCTTTT  59 109
SH08_RS09210 NONE
SH08_RS09205 NONE
SH08_RS09200 1872400 .. 1872418 - -10.3  -5.11063   ACGAGCCAATAAAAA             TACCGGC GTTAT GCCGGTA             TTTTTTTACGAAAGA 100 277
SH08_RS09180 1867982 .. 1867993 -    -3  -4.55295   CGGTTGATAAATAAA                TTTG CTGG CAAA                 CCCTACACGAAGTCG  63 28
SH08_RS09175 NONE
        opgC 1866565 .. 1866595 - -11.8  -5.03715   ATTATTCTCAAAAAA       GAACCCGCCACCAG TTT CTGGAAGCGGGTTA       TGGTCAGACTGGCGT 100 77
SH08_RS09135 1862518 .. 1862533 -  -4.6  -3.09273   TGTGCGCAAGACATA              TCGCAG CAAT CAGCGA               CGGGCAAGAAGAATG  51 19
SH08_RS09130 NONE
SH08_RS09125 1860973 .. 1860991 -  -3.8  -2.87243   GCATGAGTAGAACTA             CTGCATGT TTG ACACGCAT             TGCAGCCTCCGAACA  45 50
SH08_RS09120 NONE
SH08_RS09115 1859642 .. 1859668 -  -9.5  -5.01811   GCAGGAAATCAAAAA         TAAAGCGTGAG GGGCA CTCACGCTTTC         GCTTAAACAGTAAAA 100 72
SH08_RS09090 1856397 .. 1856416 -   -10  -5.92337   ATATACGAAAAAAAA            GCCCGTAC TTTC GTACGAGC             TCTTCTTTAAATATG 100 39
SH08_RS09070 NONE
SH08_RS09065 1852840 .. 1852850 -  -3.2  -3.29511   TCGACTGGCTGATAA                 CGCA CTT TACG                 AGGCGAAAGAGACCG  47 134
        pgaA NONE
        pgaB 1846465 .. 1846490 -  -5.5   -2.9621   ACCAGAGTGAAAGTA         CGCTACGCATA GGGG TATGCATAACA          CCAGACATAATATAA  52 58
SH08_RS09045 NONE
        pgaD 1844692 .. 1844725 - -14.7  -2.84325   GTTCGGTAAAGAGGA     CTGCGTACGTTCGGCA CTT TGCC-AACGTACGCTG     CATGCCTACAGTTAA 100 90
SH08_RS09030 1842764 .. 1842774 -  -4.6  -3.34398   GCTGGGTTTCAAAGA                 CGGC ACT GCCA                 ATCCCGATAGCCAGA  53 500
SH08_RS09010 1839493 .. 1839507 -  -8.6  -3.72893   CACGGTTGCAGGAAA               GCTAAG GGA CTTAGC               CTGCGGCGGTTTTGT  73 201
        putA 1833569 .. 1833596 - -15.6  -2.63089   GACCACGTTAAAGAT        GCCGGAGGAGGT TGTA ACATCCTCCGGC         TACCTGTTTAACCTA 100 33
SH08_RS08985 NONE
SH08_RS08980 NONE
SH08_RS08975 NONE
SH08_RS08970 NONE
SH08_RS08965 1829055 .. 1829068 -  -2.3  -3.28712   GTTTGCTCCTTACAA               CAGCC CGCA GGCTT                CTTCAAAGGACAGAC  45 6
SH08_RS08960 NONE
SH08_RS08955 1826697 .. 1826712 -  -7.6  -4.19817   CCCACGTAGCGAAAA              TATGGC AGCC GCCATA               CGCCGCGTTAATTCT  76 508
SH08_RS08940 1825799 .. 1825816 -  -4.1  -2.73875   TCCTGTTGAAGATTA             GCCGTTA AGTT TAACTGC              CAGACCTGCGACATA  46 5
SH08_RS08935 1825518 .. 1825540 - -16.3  -4.84673   TGAAATAACAGAAAA           CTCCCCCGC GAGAA GCGGGGGAG           TCGCTGGTTAAACGT 100 33
SH08_RS08920 NONE
SH08_RS08915 1821104 .. 1821118 -  -7.1  -4.07568   TTGTGCGCCTGAAAA               GACGC GTTTA GCGTC               GCATCAGGCATTATG  72 141
SH08_RS08895 1815576 .. 1815606 -  -8.2   -3.7456   ATAACGATATTGAAA       TCCAGCGTAACCTG TTG CAGGAGATGCTGGA       ACGCCATCCAGAAAT  72 365
SH08_RS08885 NONE
SH08_RS08880 1810778 .. 1810788 -  -2.4   -4.8236   GAGTTAAAAAAACAA                 GCCG AAA CGGA                 AATCGCCGACTTTAT  68 210
SH08_RS08860 1809568 .. 1809579 -    -3  -3.04398   TTCTTTGTGGAAAAG                TAAC TGAT GTTA                 TAATGTATGATGTTG  44 93
SH08_RS08850 NONE
SH08_RS08845 1808062 .. 1808085 -  -9.6   -2.7806   TGCAAATCTCTAAAG          CCCGGT-ACGA ATA TCGCAACCGGG          TATCATTTAACTTTA  70 63
SH08_RS08840 NONE
SH08_RS08835 1806611 .. 1806630 -    -3  -4.14739   CCAGGCAGCTTAAAA            GAT-AAGAA TTC TTCTTCATC            AGTCAGGAACACGTT  58 24
SH08_RS08830 NONE
SH08_RS08825 NONE
SH08_RS08820 NONE
SH08_RS08815 1800611 .. 1800634 -   -14  -5.31456   GTAATGCATAAAAAA          GAGCATTCAG TTAC CTGAATGCTC           TGAGGCTGATGACAA 100 105
SH08_RS08760 1790276 .. 1790298 - -13.5  -5.48213   CAGGCAAAAGAAAAA           GGGGTTAGC ATTTA GCTAACCCC           TTATCTTATTTGGCG 100 36
SH08_RS08755 1789397 .. 1789423 - -10.1  -5.46657   CAGTGTAACAAAAAA         CAAAGCCCCGC ATAAA GCGAGGCTATG         AAAGTGTTAGCGGGT 100 45
SH08_RS08750 NONE
SH08_RS08740 1787424 .. 1787448 -  -2.2  -2.71924   CACCTCCCGGGAAAT          CTTTACCTTT GATAT AAGGGTAAAA          TTCCACATTTCAAGT  40 40
SH08_RS08735 1787048 .. 1787075 - -17.8  -5.63517   TGGCCAAATAAAAAA        TCCCCGGAAGGC AAAA ACCTTCCGGGGA         TTTGTTCAGGGATTA 100 38
SH08_RS08725 NONE
SH08_RS08720 1785772 .. 1785785 -  -8.1   -4.7889   ATAAAGACCGAAAAA               GCCTG CGCA CAGGC                ACAAAAATCTCAGGA  91 35
        mgsA 1785214 .. 1785233 - -13.6  -4.24711   GAAAACCGTAAGAAA            CAGGTGGC GTTT GCCACCTG             TGCAATATTACTTCA 100 33
SH08_RS08705 NONE
SH08_RS08700 1780425 .. 1780437 -  -7.7  -3.57144   TCTCTTACGCCGAAA                CAGGA GTT TCCTG                CGGAACTTGAGTAAT  68 2
SH08_RS08690 1778879 .. 1778899 -  -4.7  -3.64703   CCCTGGCGATGTAAA            GTCTACAAC GTA GTTGAAAAC            TTACAAGTGTGAACT  57 220
SH08_RS08680 1777650 .. 1777686 - -13.2    -3.794   GTTCAATTTACTAAA   GGCAAAAAAAACCCCGC AGCA GCGGGGTTTTTCT-ACC    AGACGAGAACTTAAG 100 36
SH08_RS08670 1775218 .. 1775232 -  -5.7  -2.77895   TGTACGCTGAACAAG               TCCGA TCAGT TCGGA               ATAAACCAGTTCAGC  53 16
SH08_RS08665 1774584 .. 1774608 - -18.7  -4.56597   CTGTCTCTTTAAAAA          GAAACCTCCGC ATT GCGGAGGTTTC          GCCTTTTGATACTCT 100 53
SH08_RS08630 1765037 .. 1765058 -  -2.3  -4.09739   TGAATCTGGCGAAAA           TGCC-GCA CTATGCC TGCTGGCA           CAACCCTGCGTTGTT  56 142
SH08_RS08580 NONE
SH08_RS08575 NONE
SH08_RS08570 NONE
        ssuC NONE
        ssuB 1751926 .. 1751955 - -20.1  -4.06419   TGGCTTGATAAATAA       CCGAATGGCGGCA ATAG CGCCGCCATTCGG        GGAATTTACCCCTGT 100 31
SH08_RS08550 1747812 .. 1747829 -  -9.1  -5.58209   TTAAAGGTAAAAAAA             GGGAGCC GATT AGCTCCC              TGATGATATTAACTG 100 34
SH08_RS08545 1746235 .. 1746254 - -13.6   -5.9362   GAAAAGATAAAAAAA            GAGCCAGC GGGC GCTGGCTC             TTGAAGACGCTAAAT 100 40
SH08_RS08540 1744531 .. 1744546 -    -9  -5.97575   AAGGTATAAAAAAAA              CAGGAC CAAA GTCCTG               TTTTTTCGGCATTTA 100 57
SH08_RS08530 1742995 .. 1743013 -  -4.4  -5.38951   AAGGCACATAAAAAA             GCCCGCTT TTA ATGCTGGC             CTGGATTTCTGGCAA  81 215
SH08_RS08490 1731057 .. 1731072 -    -4  -3.58343   CGCAGCATGTTGAAA              GATTCGC GCA GCGA-TC              AGTTACTGGCGATGG  53 259
SH08_RS08415 1713482 .. 1713504 - -11.3  -2.86654   CAAATATATGTAAAG           CGGGGCATT AAAAA AACGCCCCG           TAATATAACTCAGAC  81 77
SH08_RS08410 1712243 .. 1712260 -    -2   -3.1247   AGCTCGGACATGTAA             CACCTA CCTTCT TAAGTG              GATTTTTTATTTACT  43 58
SH08_RS08405 1709894 .. 1709913 - -11.4  -5.00616   TCTCGCGCTAAAAAA            GGCCCCAC TTTC GTGGAGCC             TTTATTGTACGCTTT 100 68
        pflA 1708988 .. 1709011 - -13.2   -5.4505   GCGCGGAATAAAAAA          GCGGCAACTC AATA AAGTTGCCGC           TTTACGGGGAAATTA 100 38
SH08_RS08390 1707027 .. 1707038 -  -2.2  -2.93715   ACAATCTCTATAAAT                GGCT GTTG AACC                 TTAATTCGGTAGTGA  41 331
SH08_RS08375 1703590 .. 1703607 -  -9.8  -3.89572   AGCTAATCATAACAA             CCGGGG TTTCGG CCCCGG              TTCTCTTTTATTTCT  84 33
SH08_RS08330 1689713 .. 1689739 -  -9.5  -5.04249   CGGGGAAAAAATAAA        GGCGAC-CCATA GTCG CATGGTGTCGCC         TTCTTTACTTTTGTT 100 55
SH08_RS08325 NONE
SH08_RS08320 NONE
         aat 1685253 .. 1685263 -  -8.2  -3.40622   TACTCCGAAAACACA                 CGGC TAA GCCG                 CACCAAAAGCGCAAC  71 174
SH08_RS08310 1684850 .. 1684866 - -10.1  -5.56263   ATCACAAAATAAAAA              GGCCGGT TAA ACCGACC              TTTTACTCGTTCTTT 100 68
SH08_RS08305 1684535 .. 1684554 -   -10  -5.82388   AAATGCGAAAAAAAA            GCTCGCAC TTTC GTACGAGC             TCTTCTTTAAATATG 100 39
SH08_RS08290 1680993 .. 1681013 - -12.6  -4.96848   TTTTTGAGATAAAAA            TGCCAGCC GATCG GGCTGGCA            TTTTGCCTTTAGGAT 100 62
SH08_RS08275 1676524 .. 1676541 -  -6.9  -3.61715   CAGCCTGTTGAATAA             CGATCGG GAAG CCGAACG              AGAACATTTAACGGC  63 296
SH08_RS08265 1674836 .. 1674850 -  -3.5  -3.81926   TATTTTAAAAACGAA               GGCGA GTCAT TCACC               AGATAAATAAATCCA  56 119
SH08_RS08260 1674004 .. 1674024 - -11.1  -5.46629   AACATCTTAAAAAAA            GGCCTGACA TTA CGCCAGGCC            TTCTGCGTTAATTAA 100 37
SH08_RS08255 NONE
SH08_RS08250 NONE
SH08_RS08245 1669831 .. 1669856 - -11.9  -3.38581   ACTAACGGTTAAATA         GCCCGATGAAA GGAA TATCATCGGGC          ATAAGGCGATTATGC  89 35
SH08_RS08240 1667978 .. 1668008 -  -2.6  -2.89569   TGCGTAAATCAATCA       TGGCATGTCC TTATTATGACG GGAAATGCCA       CCCTTTTTACCTTAG  42 32
SH08_RS08235 NONE
SH08_RS08230 1665467 .. 1665524 -    -3  -2.50387   GTTGAGAAAATAACG TGCG-CATTCTTCCGTGATTTCCCCCATG ATG CA-ATGGGAAA-CATGAAAGAATAACGCA GGTTTTGTCGATTAA  42 37
SH08_RS08225 1664381 .. 1664398 -  -3.3  -3.92641   AAGCGGATGCAGAAA             CTCAGGC GATT GCCGAAG              CATTGCTGGAGAAAT  55 51
SH08_RS08210 1662577 .. 1662605 -    -9  -3.96148   GTCGGCGAGCATAAA       TGT-CGGCATTCC TCAC GAAATGCCGGACA        ATTTACGGGGTTTAT  80 56
SH08_RS08205 NONE
SH08_RS08200 NONE
SH08_RS08195 NONE
        artM 1659381 .. 1659407 - -12.4  -5.74086   AAATGAAATAAAAAA         GACGGACAAC TTAGTGG GTTGTCCGTC         TTCATTATAAGAATT 100 168
SH08_RS08185 1658334 .. 1658347 -  -9.5   -5.5604   TGAAGCAATAAAAAA               GCCGC ATGT GCGGC                TTCAGATTGCTGACA 100 206
SH08_RS08125 1649144 .. 1649176 -  -6.9  -5.40625   ACAGCACAGAAAAAA      TCAGTAAAGCCCTCA ACG CGAGGGCTTGTCAGA      CGATCAGGCGTCCAG  89 29
SH08_RS08115 1646669 .. 1646705 -  -3.7  -5.60689   TTAGATAACAAAAAA    CCCATCAACCTTG AACCGAAATGG CGGGGTTGATGGG    CTCCACAAAATGGGG  89 138
SH08_RS08105 NONE
SH08_RS08100 1643911 .. 1643928 -  -3.5  -3.31799   GACAATTTTTCATAA             TCATTTC GCCT GAAATAA              TGCAGCGGGTTAATT  49 97
SH08_RS08095 1643595 .. 1643621 -  -8.7  -5.47399   CGAAGGGTAAAAAAA         TGCCTGACTGC TTTGT GCGATCAGGCA         TTCTCGAATTAATGG 100 34
SH08_RS08085 1641433 .. 1641457 -    -3  -3.02461   TAATCCCTCTGAATA         GTTATTGAAGCG AGC CGCT-CAATA-C         TACACTTTTTAGCAG  44 44
SH08_RS08080 1640625 .. 1640649 - -12.1  -3.30159   TTAATCTTCTGATAA          CCGGATGGCGC GAA ACGTCATCCGG          TTATACGTCATTAAT  89 36
SH08_RS08070 1638172 .. 1638187 -  -2.4  -4.92239   GCAAAAAGGCAAAAA              CTACGG CTGG CCGCTG               GCAACCTGGGGAATC  71 376
        rimO 1635351 .. 1635393 - -11.5  -2.78018   AGCTGGCAGTAATCA TTATTCGCAGGCCGGACAAA TGAT TTTGCCCGGCCTG-AATTAA TTAAACCCGGCTACC  81 26
SH08_RS08015 NONE
SH08_RS08010 1622833 .. 1622851 -  -3.7  -4.11692   CAGCGAGTTTCAAAA             CCCCGCG TCAGG CGCTGGA             CTGCTTACTGGCAGG  60 240
SH08_RS08000 NONE
SH08_RS07995 1618825 .. 1618855 -   -11  -2.74012   TGATGATGTGAATGA       TTTAGCCCGGCGAC GAC GCCGCCGGGCCGAG       GAGATTACAGCATAT  77 30
SH08_RS07990 1617872 .. 1617890 - -11.7  -4.43173   AAAAAGAAGGGAAAA             CCGGAGC GCACG GCTCCGG             TAGAGAGGTCAGCTG 100 34
SH08_RS07985 1616302 .. 1616326 -  -8.5  -3.79633   GACAAATGCAAAATA          GCCTGATGCGC TAC GCTTATCAGGC          CTACGCAGTACCTGC  75 181
SH08_RS07975 1613470 .. 1613488 -  -8.8  -5.63517   CTGGCAAATAAAAAA             GGCGGATT ATG AGTCCGCC             TTTTGCTTTAAGTTT 100 47
SH08_RS07960 1611536 .. 1611555 - -10.7  -3.12402   GAAAGCAGGAGTGAA            GCGGCGT ACCGCG ACGCCGC             TATTTATCGGAAGGT  79 25
SH08_RS07955 1609673 .. 1609690 -  -8.4  -5.36441   TGGTGATATAAAAAA             TCCGCC TCTCGG GGCGGA              TTTTTGTTTTTAAGG 100 35
SH08_RS07945 1607859 .. 1607888 - -16.7  -3.96827   AAAAGTAGCGAGAAA       TTCTGCATGGTTA TGCA TAACCATGCAGAA        ATGTAAATTTAATTA 100 34
SH08_RS07940 1607033 .. 1607053 - -13.3  -5.07652   GGCTGCAAAACAAAA            CGGCCTCCT GTC AGGAAGCCG            CTTTTATCGGGTACT 100 67
SH08_RS07935 NONE
        glnH NONE
        glnP 1605152 .. 1605163 -  -4.4  -2.95448   TTAAATTCAATCACA                GGAT TTTC ATCC                 TTCTTTCCAGACGAC  47 9
        glnQ 1604288 .. 1604307 -  -6.4  -3.30006   AGGAAGGGATATTAA            GCAGGTTG CTGA CAACGTGC             GGGCTTTTTTGCCGG  59 146
SH08_RS07915 1601906 .. 1601923 -  -5.5  -3.15544   CTGGACCTTTATGAA             CGACGAGC AGC GC-CGCCG             TTTTGTCAATCGCCA  53 44
SH08_RS07905 1600447 .. 1600468 -  -7.3  -4.48903   CAAAACAGACGAAAA           CTGCATCCA GAGG CGAATGCAG            TTACGTTGGTGGGGT  78 40
SH08_RS07900 1597911 .. 1597928 - -12.7  -4.58283   CAATTTCTCCAAAAA             GTGGGGC CTGC GCCCCAC              ATCTGAATCAGAAAT 100 33
SH08_RS07895 1597217 .. 1597228 -  -2.2  -2.73364   CGGGCAGTTCAAGCA                TCAG ATCT CCGA                 CCATTCCCGCAGCAG  40 14
SH08_RS07890 NONE
SH08_RS07885 1596130 .. 1596151 - -13.7  -5.81412   GCCAGCTAAAAAAAA           GCCCGTCCA GTGG CGGACGGGC            AAACAAGGGTAACAT 100 226
SH08_RS07865 1590840 .. 1590877 -  -6.9  -4.86033   AAACCTGCAGAAAAA   CCGTCTCGCCGCCTCGGC GAT GCCAAACCGGC-AGGCGA   ACAACAACGTCGCCG  85 303
SH08_RS07855 NONE
SH08_RS07850 NONE
SH08_RS07845 NONE
SH08_RS07840 NONE
SH08_RS07835 1583314 .. 1583326 -  -4.8  -3.54475   TTCTTCAGGAGAGAA                GCCA TGAAG TGGC                AACAACGTGTTCGTG  53 388
SH08_RS07825 NONE
SH08_RS07820 NONE
SH08_RS07815 1579970 .. 1579980 -    -4  -3.31144   GGCCCATTTGGATAA                 TAAG TTG CTTA                 ATGATTGTGTTATGG  49 274
SH08_RS07775 1575357 .. 1575377 -  -8.3  -2.64616   CCTGGAGTCAGATTA            TCCGCGCTA CAG TAGCGCAAA            TTGCGGGGAAACAGC  63 225
SH08_RS07770 1574272 .. 1574296 -  -8.5  -3.79633   GACAAACGGAAAACA          GCCTGATGCGC TAC GCTTATCAGGC          CTACATTTTCTCCGC  75 155
SH08_RS07740 NONE
SH08_RS07735 1566087 .. 1566113 - -13.8  -2.53759   AATACCTTTAAGTGA         TACCAGATGGCA TTG CGCCATCTGGCA         GAGTGATTAACTAAA  93 32
SH08_RS07730 1564648 .. 1564659 -  -7.2  -3.30124   CCGTAGGCCGGATAA                GGCG TTTA CGCC                 GCATCCGGCAAATAG  64 51
SH08_RS07710 1558215 .. 1558229 -    -7   -4.7373   CTACTGCATGAAAAA               GGCCGC TAT GCGGTC               GGGCAGGGACCAATG  85 105
SH08_RS07700 1556292 .. 1556312 -  -9.7   -3.2964   AAAGTGTGTCGATAA            CCGCCTGAT TAA ATCAGGTGG            CTATAAATGAACTGG  76 13
SH08_RS07675 1552531 .. 1552562 -  -3.7  -4.30719   GTGTTTCATAACAAA      TTGTCAACACGCT TAGCAC AGCGTGGCGATAA       TCACGCTGTCGGCAT  63 6
SH08_RS07670 NONE
SH08_RS07665 NONE
SH08_RS07660 NONE
SH08_RS07655 NONE
        galM 1546461 .. 1546477 - -10.1  -4.14193   ACAATATGAGATAAA              GCCCTCA TGA CGAGGGC              GTAACATTACTCAGC  88 32
        gpmA 1545485 .. 1545505 -  -8.3   -5.5112   GTTAGCAACAAAAAA            GCCGACT CACTTGC AGTCGGC            TTTCTCATTTTAAAC 100 50
SH08_RS07635 NONE
SH08_RS07630 1543583 .. 1543602 -  -9.3  -4.78661   AGTGAAAAATTAAAA            GGGAGAG ACTCCG CTCTCCC             ATTATTGGCTATTTT 100 47
SH08_RS07625 1542533 .. 1542563 - -15.5  -3.15544   CCGGATGTGGATCAA       CAGCGCACGTGAA AGAGG CTCACGCGCGCTG       TCCCATTAATGGTGA 100 31
SH08_RS07505 1523458 .. 1523469 -  -2.2  -4.60924   GAAATGTTCGAAAAA                GATC CGCA GACC                 GAAGCGATCGTGATG  66 396
        gltA 1511818 .. 1511845 - -12.8  -4.99035   TTAGGCATATAAAAA        TCAACCCGCCAT ATGA ACGGCGGGTTAA         AATATTTACAACTTA 100 52
SH08_RS07445 1510888 .. 1510905 -  -9.8  -3.76781   AAATATTTTATGAAA             GGCGGC GATGAT GCCGCC              AAAATAATACTTATT  84 36
SH08_RS07440 NONE
SH08_RS07435 NONE
SH08_RS07430 1506572 .. 1506599 - -13.6  -3.35522   CAATTTTCTGAAAGA        GATGCCCTTT-CC GGC GGCAAAGGGCATC        ATGGTAAATCAGTTA 100 34
SH08_RS07425 NONE
SH08_RS07395 1499709 .. 1499750 - -10.2  -3.46936   AAATTGCAGGAAATA CGTAGGCCTGATAAGACGC GTCAA GCGTCGCATCAGGCAT-CG GTGCTGGCCTATTAA  80 37
        kdpF NONE
SH08_RS07335 NONE
SH08_RS07330 1483683 .. 1483696 -  -8.1  -2.65766   GTAAACCTCACACCA               GACCG CAAA CGGTC                AGCAGTAAATCAATG  60 4
SH08_RS07325 NONE
SH08_RS07320 NONE
SH08_RS07315 1479685 .. 1479704 -  -6.4   -5.0916   TGTTTAAGATAAAAA            GCCGTATT TATT ATTACGGC             TTTAATTAATAAAAG  87 64
SH08_RS07305 NONE
        potE 1475596 .. 1475615 -   -10  -4.46072   GCCAACAAACAGAAA            GGGCGATC ATTC AATCGCCC             TTTTTTACTTTGTTT 100 43
SH08_RS07295 1475239 .. 1475270 -  -4.4  -3.89956   CCATCATACACTAAA      TCAGTAAGTTGGCA GCAT CACCTACTAACTGA       TTCATTTCACGCATC  57 163
SH08_RS07290 NONE
SH08_RS07285 1473537 .. 1473549 -  -6.9  -2.53822   CTTACCTGATAATAC                CCGCC GCT GGCAG                TTGTCAGGCGGGAAC  52 333
SH08_RS07265 1469836 .. 1469857 -  -7.9  -2.94232   TTCGGGGGAAACAAT           CAGCCAGGC CTCT GCCCGGATG            GATAGCGCGCCATAA  62 116
SH08_RS07260 1469477 .. 1469490 -  -2.3  -2.90227   GCGGAATCAGCAAAC               GAGCA GGAC TGCAC                ACTGTGCTACATGAA  41 50
SH08_RS07255 1468812 .. 1468839 - -16.4  -3.19463   GGCATTATCTATTAA        TACGGCGTAGAC ATGA GTCTACGCCGCA         TCACATCAGGCATTG 100 31
SH08_RS07245 NONE
         fur 1468073 .. 1468090 - -11.3  -5.24129   CCCTTGCATAAAAAA             GCCAACC CGCA GGTTGGC              TTTTCTCGTTCAGGC 100 45
        nagB 1460687 .. 1460710 -  -8.9  -3.08726   GATTTTAAAAAATAT          TGCCCTGAGC AAGGA GC-CAGGGCA          GGGATAACAATTACA  69 36
        nagA NONE
SH08_RS07205 1458250 .. 1458263 -  -3.9  -3.37975   ATGGACTACCCAGAA               TATTG ACAA CAATA                AGCGCCACTATAAAA  49 46
SH08_RS07200 1457144 .. 1457158 -  -7.8  -5.40072   GCTTGTTTAAAAAAA               TGCCGC AAA GCAGCA               CTGTGCGCAAGCGAT 100 351
        asnB 1455382 .. 1455416 - -16.6  -3.66732   CAAGCACCTCAATAA    CTGAAACAGCCCCGG ATTTCA CCGGGGCTGTTTC-G     CATTTCTTACTTATA 100 32
SH08_RS07190 NONE
SH08_RS07185 NONE
SH08_RS07180 NONE
SH08_RS07175 1454636 .. 1454652 -    -3  -3.33815   ATGTGCTCTAACCAA             CTGAGCT ACGT AGC-CAG              ATTGTTTCTTCGATG  47 39
SH08_RS07170 NONE
SH08_RS07165 NONE
SH08_RS07160 1454314 .. 1454329 - -10.4   -5.1417   GCAGAAAAGCAAAAA              GCTCGC CGAA GCGAGC               TTTTTTAATGTGGCT 100 36
SH08_RS07150 1451411 .. 1451436 -  -9.7  -5.51046   TAAAGAGAGAAAAAA         CAAGGCCCACCG GAA CGGCAGGCC-TG         AGAATTACGGCTGAT 100 30
SH08_RS07145 NONE
SH08_RS07140 1449730 .. 1449753 -  -8.8  -4.43477   GTTAGTTAATCAAAA          CGCCGTCGTT AATC ACCAACGGCG           GGGACGTCTGCCAGT  93 56
SH08_RS07135 NONE
         lnt 1446964 .. 1446982 -  -6.1  -3.05463   ACCTTCCTTAGGTAA             CATTTAG TTTGG CTAAATG             TAAAGATATTGCTGT  56 296
SH08_RS07125 1445860 .. 1445871 -  -2.2   -2.7186   AAATGCCTTGAATCA                GCCT ATTT AGAC                 CGTTTCTTCGCCATT  40 61
SH08_RS07120 1444599 .. 1444626 - -16.4  -5.26316   CTACTCCAGAAAAAA        GAGGGTAGCAGC GTTA ACTGCTACCCTC         GAAGATTGTTACCCA 100 148
SH08_RS07115 NONE
SH08_RS07110 NONE
        artP 1442310 .. 1442322 -  -3.3  -3.71686   CGCAATCTAACAGAA                TTGGC AGT GCCAT                TGTTGCTCCTTGTTG  51 143
        rihA 1441338 .. 1441375 -  -9.3  -3.77089   AAAAAGAGATAAACA   GATTAAGACCACC-CAGG TAA CGCGTGGTGATCTTAATC   AATGACGTGTGTTAA  81 37
SH08_RS07095 1439427 .. 1439446 -  -2.8  -3.21416   GAGCCGGAGGATGAA            GATGTCGA TGAG CCAACACC             TGAAAATCATGAAGA  45 212
SH08_RS07080 1436441 .. 1436451 -    -4  -3.58905   ACGCGTGATACAGAA                 CATA CCT TATG                 GCCATTATATCTAGT  53 336
SH08_RS07065 1433444 .. 1433467 -  -7.4  -2.72851   CAATAAAGAGAATAT          GGGCCGAATGA AAT TC-CCCGGCCC          TTGTTTTTATCTCTA  58 38
        leuS NONE
SH08_RS07050 1429507 .. 1429518 -  -2.2  -3.28712   TTGTTCCGGGTACAA                CCGA ATCA TCAG                 TTACCCAGCGTGGTG  45 22
        holA NONE
SH08_RS07040 1427837 .. 1427851 -  -2.8  -2.90075   CCCTCCGTAACGACA               GGTATC AGC GATACA               AGCCTTGTTGGTTAA  42 15
SH08_RS07035 1427046 .. 1427062 -  -6.5  -3.53343   AATCGGCTTTCGAAA              GTGGGCT ATC ATCCCAC              CCCGCGCCGCAGATT  61 169
SH08_RS07030 NONE
SH08_RS07025 1426150 .. 1426178 -  -8.2  -2.78679   GTTTTCTACTCAAAG        CTCCCTTATCAC TCACG GTGATAAGGATG        GTTGGTGGTGATGCT  64 5
SH08_RS07020 NONE
SH08_RS07015 NONE
SH08_RS07010 NONE
SH08_RS07005 1420585 .. 1420604 -   -15  -3.50456   GTAATTAAATAGCAA            CTCCCGCC AGAA GGCGGGAG             TTTTTTACTGATGCT 100 83
SH08_RS07000 NONE
SH08_RS06995 1419512 .. 1419533 -  -5.1  -3.24456   AGATATTATGAGTAA           TGACCCAGT GTAA ATTGGGCCA            TTGATGTATGGAATT  55 39
SH08_RS06985 1418245 .. 1418261 -  -2.1  -3.62864   GAAACGGACCTGAAA              GCAGCCA AAG CGGTCGC              GAAAATGTAAAATTG  49 99
SH08_RS06980 1417107 .. 1417124 - -11.3  -5.36441   GTTCGATACAAAAAA             CCCGCTT CAAA AAGCGGG              TTTTTTATCAGACAG 100 62
SH08_RS06965 1415435 .. 1415451 -  -9.4  -4.36729   AGCAAGAATTCAAAA              CCCGCT TAATC AGCGGG              TTTTTTTTGGTCTTT  88 39
        dcuC 1412462 .. 1412484 - -13.4   -4.0162   GGGTGACATGATAAA           GCCGGAGGAA ACT TGCCTCCGGC           ATTACTATTTACTTG 100 34
SH08_RS06935 NONE
SH08_RS06930 NONE
SH08_RS06925 NONE
SH08_RS06920 NONE
        citX NONE
        citG NONE
SH08_RS06905 1402968 .. 1402995 - -18.5  -5.42265   TTAAATCATAAAAAA        GCCCGCCAGGT GGGCTT ACCTGGCGGGC         GTGATGATTTATTCA 100 57
SH08_RS06900 1401935 .. 1401957 - -12.7  -5.11836   ATACCCAAAAGAAAA           CCCTCACCG TCAGG CGGCGAGGG           TTTAACTCACATGAT 100 175
SH08_RS06895 1401413 .. 1401432 - -12.2  -3.53811   CTGATTTTGCGTAAA            GAGGATGC GAGT GCATCCTC             TGGGCAAAGCGAGTT  91 60
SH08_RS06890 1400808 .. 1400833 -  -7.5  -3.75153   GGTTTTGAAGCGAAA         GGCAGCACCAC GGAA ACGGTGCTGAC          TAACCTGAAACTGGA  69 432
SH08_RS06880 1399302 .. 1399329 - -14.8   -4.7373   TTATGGCATTAAAAA        GCCCCGCCGGGA TGGC TCCGGGCAGGGC         GGGATACTTATTCTG 100 45
        dsbG 1395645 .. 1395655 -  -3.2  -4.08692   TAAGTTTTTCTAAAA                 TAGC ACA GCCA                 CTTAGGGCAGAGCGA  58 107
SH08_RS06860 1394487 .. 1394499 -  -5.5  -3.09202   ATAGACATCTGAAGA                CGCTC TCT GAACG                TTACAGGGTGATCAG  53 152
SH08_RS06855 NONE
SH08_RS06850 1392307 .. 1392323 -  -3.5  -3.01712   CCTTTTCGGTGAATA              CCCCGGC ACA GCTGGCG              CTTGCTGATATGCTA  46 359
SH08_RS06840 1390038 .. 1390049 -  -7.2  -3.30124   TTGTAGGCCGGATAA                GGCG TTCA CGCC                 GCATCCGGCACTCTT  64 275
SH08_RS06800 1381461 .. 1381483 -  -3.4  -3.12351   GCGTCCGACAGTTAA           TGCTTAAAAC AGC GCCTTAAGCC           TATCCAGCACTTGCA  46 6
SH08_RS06790 NONE
SH08_RS06785 NONE
SH08_RS06780 1377271 .. 1377283 -  -7.7  -2.98789   ATCCAGAAAACAGGA                TGCCA TGA TGGCA                GACCACTTAGTTTAA  62 37
SH08_RS06755 1368105 .. 1368134 - -14.3  -3.30124   TTGTAGGCCGGATAA       GGCGTTCACGCCG CATC CGGCATGAACGAC        GCGCACTTTGTCAAC 100 56
SH08_RS06750 1367112 .. 1367138 -  -3.6  -5.34365   GGAGAATAACAAAAA         TGGTCATCTGGA GCT TACAGGTGGCCA         TTCGTGGGACAGTAT  80 257
SH08_RS06730 1364113 .. 1364124 -    -3  -3.29043   AAGGGTGTTTCATAA                CATT GTTA AATG                 TAAGTTAAAACACCA  47 77
SH08_RS06725 1363846 .. 1363860 -  -5.6  -2.71364   GTATGCCGCGAAGTA               CGGCGA TAA TCGACG               TTTAATCCGCCAGCG  52 27
SH08_RS06720 NONE
SH08_RS06715 1362655 .. 1362672 - -14.1  -3.50588   ATCTGAGAGGAAATA             GCCGGGC AGAT GCCCGGC              AAGAGAGAATTACAC 100 35
SH08_RS06710 1361291 .. 1361317 - -16.7  -3.63895   GTCAACCATCCGAAA         CCGCTCTCATC CATTC GATGAGAGCGG         TTTTTTTAATTACTG 100 35
SH08_RS06680 NONE
SH08_RS06675 NONE
        nfrB NONE
SH08_RS06665 NONE
SH08_RS06660 1344965 .. 1344991 - -13.8  -3.44487   GATGAGAGCGAAAGA         GGTAAGCCAGGT CGT ACCCGACTTACC         TGGAGGAGATTTAAT 100 36
SH08_RS06655 NONE
SH08_RS06650 1343866 .. 1343887 - -10.9  -2.78465   ACTGAGACACATAAG           GCCTCGCAA TGGC TTGCAAGGC            TTTACATGTTTTGAG  77 86
SH08_RS06645 1342203 .. 1342231 -  -3.2  -3.16564   CTCTTATTCTATCAA       TGTCGTAGCC-CA GAAA TGTGGCTATAACA        GTACTTCATATTTCA  45 385
SH08_RS06630 1339825 .. 1339841 -  -2.1  -5.80003   GGAAGAAACAAAAAA              CAGCCTG ATG CAGGTAG              CCAGTGAGCATATTG 100 247
SH08_RS06615 1337888 .. 1337942 - -11.6  -4.09511   AATACCCCCTGAAAA GAAAGGAAACGACAGGTGCTGAAA GCGAGCT TTTTGGCCTCTGTCGTTTCCTTTC TCTGTTTTTGTCCGT 100 225
SH08_RS06600 1337072 .. 1337083 -  -4.4  -4.13561   TTCGTGTAAAAAATA                TGCT TAAT AGCA                 CCATTTCTATGAGTT  62 327
SH08_RS06590 NONE
SH08_RS06585 1334904 .. 1334923 -  -9.2  -4.88129   AAAAATTATTAAAAA            TGGGGCGT TGAG ACGCCCCC             AAAAATAAAGGGTAA 100 371
SH08_RS06495 1326572 .. 1326587 -  -3.2  -3.12999   GCAGCGGAGACTGAA              GCGCCGC AAT GCAG-GC              TTGCCGTGTTGTGAG  46 68
SH08_RS06490 1325227 .. 1325257 - -11.8  -2.60079   TGACCGTATAATTCA       CGCGATTACACCGC ATT GCGGTATCAACGCG       CCCTTAGCTCAGTTG  73 115
SH08_RS06480 1324374 .. 1324388 -  -4.4  -3.54743   TATGATCAATTATAA               TTAATA TTA TATTAA               TTCGTATAATTTGGC  52 17
SH08_RS06450 NONE
SH08_RS06445 1317163 .. 1317184 - -15.9  -3.95836   AGTCTGAAAAGAGAA           CCGGCCTGT TGAT ACAGGCCGG            GAAAGGGATCAGGCA 100 34
SH08_RS06440 1316066 .. 1316076 -  -6.8  -3.70446   CTACAGCGAAGAGAA                 CCTG AAG CAGG                 CGCGTGCGGCGCTGG  63 513
SH08_RS06430 NONE
SH08_RS06425 1313644 .. 1313654 -  -2.4  -4.08394   ACATGCGTCTTAAAA                 CTCC TGT GGTG                 CACAACTCTCGGCTT  55 121
        purE NONE
SH08_RS06415 1311956 .. 1311988 - -10.6  -2.57881   CAATTGGTGCACAAT      GCCTGATGCGATGC TTGAC GCATCTTATCAGGC      CTACAATGGGTACCG  74 96
SH08_RS06390 NONE
SH08_RS06385 NONE
SH08_RS06380 1303732 .. 1303751 - -13.6  -5.63504   AATGTTACAAAAAAA            GCCACGGT ATAA ACCGTGGC             AAAATCCAACATAGC 100 50
SH08_RS06330 1291783 .. 1291808 -  -4.7  -2.94412   GTGAACCTCAAATCA         GCTTGCGCGCTA TTT TA-CGCGCCAAC         GCGCAAGGAAACTTG  50 45
SH08_RS06325 1290575 .. 1290598 -  -2.4  -3.28712   TCTTGTTTTGGATAA          GGATTCGACA CTCA TATCAAAACC           GGTAACTCTCAACCT  45 92
SH08_RS06320 1289976 .. 1289991 -  -6.2  -4.67048   CTATCTGAAAATAAA              TAATCC TTCC GGATTA               AAATAAATTCTTGCC  77 212
SH08_RS06285 NONE
SH08_RS06280 NONE
SH08_RS06275 1277893 .. 1277924 - -10.9   -4.4846   CAATTGAAGAAGAAA      TGATGCGATGCCG GATGCG CAGCATCGCATCC       GGCGTTGTGGTTCAT 100 59
SH08_RS06260 NONE
SH08_RS06255 1274551 .. 1274569 -  -3.8   -4.7497   GCGATGTAGCAAAAA             TTACCGGC CTG ACCAGCAA             AGCCATTCGCTTCTA  73 390
        copA 1269230 .. 1269283 - -10.1  -2.57931   CGTAGGCCGGATAAG GCGTTTACGCCGCATCCGGCATCCG AGCA CCATTGCCTGATGCGACGCTTACGC GTCTTATCAGGCCTA  71 150
SH08_RS06225 1267657 .. 1267668 -  -7.2  -2.98014   AACGAAGCAAGCATA                CGCC TGAT GGCG                 GTCCAAAAAAAAGAG  61 176
SH08_RS06220 1267107 .. 1267130 - -16.8  -3.67976   GGCAGTAATCCGAAA          GTGCCGGATG TTTG CATCCGGCAC           AATGCTTAATCGCGG 100 31
SH08_RS06210 1263976 .. 1264002 - -15.3  -3.09831   GCGACTGTAAAACGA         TGCAGCCAAAG TTTGC CTTTGGCTGCA         ATGAAATCAGTCTTT 100 32
SH08_RS06205 1261990 .. 1262001 -  -7.2  -3.50393   TCGTAGGCCAGATAA                GGCG TTCA CGCC                 GCATCTGGCATTTGG  66 119
SH08_RS06195 1259479 .. 1259512 -  -9.7  -3.66995   GGGAAAAAATATGAA     TATATTCCGGCGC TTAATGCC ACGCCGGAACATA      TCGAAATGATGGCTA  77 60
SH08_RS06150 NONE
SH08_RS06145 NONE
SH08_RS06140 1250441 .. 1250461 - -12.6  -3.18505   GGGTAAAAACGAAAG            GGGGCAAC ATTTA GTTGCCCC            GAGATTGCTAACAAA  93 33
SH08_RS06125 NONE
SH08_RS06120 1241752 .. 1241767 - -11.8  -5.28176   GTTATGCATAAAAAA              GGCCGC TTAC GCGGCC               TTAGTGATTACACGT 100 45
SH08_RS06115 NONE
SH08_RS06110 1240475 .. 1240486 -  -2.2  -4.07568   TCCGGTTGCTGAAAA                TGCG GCAA CACA                 GTAAGACGAAAAGTC  53 162
SH08_RS06105 NONE
SH08_RS06100 NONE
SH08_RS06095 1237133 .. 1237149 -  -5.9   -3.1916   CAAAAAATCCCAACA              TGGCTAA ACT TTAACCA              CAACTGACGTCGCAA  55 476
SH08_RS06085 1236378 .. 1236402 -  -7.1  -3.83026   TGCCGGTACAGCAAA         CCGCCGTGCC GGTTCA GGC-CAGCGG          TGGCGCAACGACTAC  66 138
SH08_RS06075 1234802 .. 1234828 -  -9.5  -5.07053   AAGCACTGCAAAAAA        CAGCCGGACGGT TTTC ACC-TCCGGCTA         TTTTTTTAATTGTGA 100 31
SH08_RS06040 1226106 .. 1226120 -  -8.6  -4.89477   GCTTGAACAATAAAA               GCGTTA TGG TAACGC               CTGCGATTAACCCGG 100 50
SH08_RS06035 1224878 .. 1224900 - -10.7  -3.12351   TTTTGCCAGACTGAA           GAGGTCATA CCAGT TATGACCTC           TGTACTTATAACAAC  79 510
SH08_RS05980 NONE
        ampG 1212382 .. 1212402 -  -4.9  -4.90525   CAATGTGAAATAAAA            CAATTATTT AAC AAATAATTA            TCATTAGAGTGACAA  74 226
SH08_RS05970 NONE
SH08_RS05965 NONE
SH08_RS05960 NONE
SH08_RS05955 NONE
SH08_RS05950 1207314 .. 1207327 -  -8.1   -5.4756   AATGCTAAGAAAAAA               GGTGC CGTA GCACC                TTTTTAATAGAGAGG 100 46
SH08_RS05945 1205570 .. 1205593 -  -3.8  -3.97911   ATCAAAGACAGCAAA          CTGAAAGTGC AGGC GCAAATTCAG           GGCGATGAAATCCGC  58 267
SH08_RS05935 NONE
SH08_RS05930 1203176 .. 1203188 -  -6.3  -3.42069   TGAAGCGGAAGAAGA                GAAGT TCG ACTTC                AGCATTCTCGATAAA  58 421
SH08_RS05920 NONE
SH08_RS05915 NONE
SH08_RS05910 1198753 .. 1198763 -  -2.4  -3.08133   CACTTACTTATGTAA                 GCTC CTG GGGC                 TTCACTCGTTTGCCG  43 110
SH08_RS05905 1197219 .. 1197244 -  -8.3  -3.18681   TCGGAAGTGGATTAA         GCCCGATCGTTC CTG GGACGAT-GGGC         TCGCTGGCAGCGATT  63 475
SH08_RS05870 1192568 .. 1192579 -  -5.8  -4.08767   GCCACTGTTTGAAAA                TCCC TTGC GGGA                 GTGAAAAAGGCGCAA  68 291
SH08_RS05865 1191632 .. 1191652 - -12.6  -4.14257   GTTAACAATCAGAAA            TGCCGGGA ATAAA TCCCGGCA            TTTTCATAATCAGAA 100 35
SH08_RS05825 1184621 .. 1184647 -  -2.8  -4.63218   CGCTGCGTAAGAAAA         GTCAGGCGCTAC GTC ATGGCGGCTGTC         AGGTGCTGTATGCGG  68 248
SH08_RS05795 NONE
SH08_RS05790 1173037 .. 1173058 -  -3.7  -3.48684   TCACAACCACCAGAA           CGGCTAC CAATCACC GTAGCCA            ATAAAGTGATAGCTT  51 107
SH08_RS05785 1171590 .. 1171632 -  -5.5  -5.30189   CACAAGAGTAAAAAA CGTAGGCAATTGGCGCATCA TGCC TGATGCGACGCTTGCCG-CG TCTTATCAGGCCTAC  84 223
SH08_RS05775 1169598 .. 1169612 -  -7.1  -3.30124   TCGTACGCCGGATAA               GACGC GGCAG GCGTC               GCATCCGGCATTAAA  64 54
SH08_RS05735 1165319 .. 1165359 -  -9.9  -4.65182   TACAAAGCAAAGAAA GCCGGACGT-A-ACCG-CAC CGAA GTGGCGGCCTGACGTCCGGC GAAAGTCATCAGGAT 100 34
SH08_RS05705 1160329 .. 1160353 - -10.8  -4.42851   TGAAGAAACTGAAAA          CGCCCAATAA GAATA TTATCGGGCG          TTAAAATATTACATT 100 34
SH08_RS05695 1159561 .. 1159579 - -10.2  -2.78263   ACAATGTAAAACTTA             CTGGCGGC GAT GTCGCCAG             TGCAGCCATAGCGCC  75 4
SH08_RS05675 1155621 .. 1155649 - -10.4  -4.40298   ATCGAAATGAATAAA       GGCAAACTGGTCG CTAT CAACC-GTTTGCC        TTCAGAGTATTAATC 100 39
SH08_RS05660 NONE
SH08_RS05655 1151878 .. 1151899 -  -7.3   -3.4285   TCAGGCAATTTATAA           CGTTGCTGA AACG TCAGCAATG            TATGATGTTGCTACA  61 398
SH08_RS05645 1150300 .. 1150310 -  -6.8  -2.85668   GAGGGGCATAGTATA                 CCTG AAG CAGG                 GTAGGGATGTTTTAC  57 145
SH08_RS05640 1149185 .. 1149201 -  -6.5  -2.73875   GGCGGGGTAATACGA              GAGTGGA CGG TCCCCTC              GCCCCCTTGGGGAGA  55 110
SH08_RS05615 1144486 .. 1144496 -    -4  -3.91488   AATTTGCTCAAAGAA                 TCAT TTT ATGA                 ATTACAAAGCCTTCA  59 121
SH08_RS05610 1143010 .. 1143022 -  -4.1  -3.44051   GTTCGAGCATTATAA                CGAAT GGC ATCCG                CATAGTGCGCTGGGT  52 275
SH08_RS05595 NONE
SH08_RS05590 1140441 .. 1140491 - -16.6  -3.06302   ATCATCTGCATGCAA TATACTATAGGGGGGTATTCTAT ATGTCA AT-GCATACCCCCCTATAGTATA TAACACTGGAGAATA 100 136
SH08_RS05585 NONE
SH08_RS05580 1138960 .. 1138980 -  -7.5  -2.85407   GAGAGTATTAAGAAC            CCCCGCC TGAAGTG GACGGGG            TAAACCTGCGGGAAA  59 41
SH08_RS05575 1138035 .. 1138046 -  -7.2  -3.30124   GTGTAGGCCGGATAA                GGCG TTCA CGCC                 GCATCCGGCAGTCGT  64 48
SH08_RS05530 NONE
        lacI 1126932 .. 1126945 -  -6.7  -2.70932   TGGGGTGCCTAATGA               GTGAG CTAA CTCAC                ATTAATTGCGTTGCG  56 42
SH08_RS05520 NONE
        lacY 1124874 .. 1124885 -  -7.2  -3.28791   ATGTTGGTCGGATAA                GGCG CTCG CGCC                 GCATCCGACATTGAT  64 44
        lacA NONE
SH08_RS05490 NONE
SH08_RS05455 1109801 .. 1109832 -  -9.4  -2.66451   ATCTATTGAAATTTA      TGCCGGATAAAGCG TTCG CGCTGCATTCGGCA       GTTCAGCTTTTCAGC  68 28
SH08_RS05445 1108496 .. 1108517 -  -7.2  -5.31059   AGACCAATGAAAAAA           GCCCACAC AGGGGA GAGTGGGC            TGAAATGGGAAGCTA  95 152
SH08_RS05390 NONE
SH08_RS05385 1096032 .. 1096045 -  -2.3  -3.78909   TAACGATAAAATCAA               GCTGG TTCT CGAGC                TAACGGAACGTAACC  51 459
SH08_RS05375 1094491 .. 1094516 -  -7.5   -4.4009   TGTTATTGCATAAAA         CCGCGCCATGT CTGC ATATGGCGCTG          TTTCTCCTACCTCTT  75 353
SH08_RS05365 NONE
SH08_RS05360 NONE
SH08_RS05355 1088363 .. 1088373 -  -5.4  -4.84914   ATCCAGAGAATAAAA                 TCTG TCG CAGA                 TAAGGTTGTATTAAT  75 207
SH08_RS05350 NONE
SH08_RS05345 NONE
SH08_RS05320 NONE
SH08_RS05315 NONE
SH08_RS05310 1080535 .. 1080558 -  -6.9  -4.56597   GTCTTGCTGTAAAAA          TACATGATT GATATT AATCATGTA           TTTTACCTAAGACGA  76 171
SH08_RS05305 1079416 .. 1079426 -  -3.2  -4.24123   GGAACAATTTGAAAA                 CAAG AAC CTCG                 CTTAGGCCTGTGTCC  58 27
SH08_RS05285 1075962 .. 1075976 -  -5.7  -3.29511   TGGATTTTTCGAGAA               TGGAG GTTAT CTCCA               CTTTACTGGCCGATA  57 168
SH08_RS05280 NONE
        rpmJ 1075268 .. 1075300 - -12.3  -4.26344   ATATCCCCAGGAAAA      TTAATGTTGGTGT TATAAAC ACACCAACATTAA      TCCGATCTGATTATT 100 77
SH08_RS05265 1073675 .. 1073687 -  -4.8  -2.53876   CCCGAGTTGAATTGA                GGAC GTGAT GTCC                CAGTGAGTCATTTTT  47 62
SH08_RS05260 1073027 .. 1073045 - -11.7  -4.24342   CCGTCCAGGAATAAA             GCAGGGG GGCTA CCCCTGC             TGGTACATCAGAGAG 100 42
SH08_RS05255 NONE
SH08_RS05250 NONE
SH08_RS05245 NONE
SH08_RS05240 1067195 .. 1067227 -  -4.8  -3.84619   AAATCGTAAAGAGAA      CAGCGGTACATCGT ATGTA AGAACGTACCGCGG      TTGGCTGGGGAACTT  59 271
SH08_RS05235 1066596 .. 1066626 - -12.8  -2.76189   TAATGCATTGAATGA       TAAAAATGGCGC AAATACA GCGCCATTTTTA       TAGGTTAAAAACATT  91 230
SH08_RS05225 NONE
SH08_RS05220 NONE
SH08_RS05215 NONE
SH08_RS05210 NONE
SH08_RS05205 1060183 .. 1060199 -  -9.5   -3.2045   AAAAATGCATTAACA              TCGCATT CGT AATGCGA              AGGTCGTAGGTTCGA  67 185
SH08_RS05195 NONE
SH08_RS05190 NONE
SH08_RS05185 1057885 .. 1057902 -  -7.1  -4.33854   ATCAATAAAATTAAA             TCTGTAA TTTA TTACAGA              CTTTCTCGTACAGAA  75 19
SH08_RS05180 NONE
SH08_RS05175 NONE
SH08_RS05170 1055267 .. 1055294 - -12.2  -4.40333   TTGAAACAATACAAA        TAA-GGCCTTCTC ACT GAGAAGGCCATTA        CCGACTTACAGTTCG 100 31
SH08_RS05160 NONE
SH08_RS05155 1052135 .. 1052147 -  -3.3  -2.83258   AACAGACTGAATAAT                CGGCA TAA TGCTG                GCATGTCCACGCTGG  43 157
SH08_RS05150 1051092 .. 1051114 -  -5.5  -3.41051   CCAGCTCGACCACAA          CGTGCCGTCG TGGC CG-CTGCACG           AGCAGCCCATTCCGG  54 293
SH08_RS05125 1043761 .. 1043777 -  -2.9  -2.59447   GGCGAATGAGAATAT              TTGCCTG CCG CCGACAA              TCAGGTGGTCGGGGA  41 56
SH08_RS05120 1043370 .. 1043383 -  -2.3  -2.76969   TAAGCCATTTTAAAT               GACTC GGAG GTGTC                TGTTAAACCCGTGGC  41 6
SH08_RS05115 NONE
SH08_RS05110 NONE
SH08_RS05105 NONE
SH08_RS05100 NONE
        fbpC 1040667 .. 1040700 -  -9.5  -3.30124   TTGTAGGCCTGATAA     GCGCAGCGCATCAGGC ATT GCCGGATG-GCGGCAC     AAGCGCCTTATCCGG  74 60
SH08_RS05080 1036579 .. 1036607 -  -3.9  -2.90462   AAAGCCAGAAAAGAT       CGGTGG-TACTG GAATAA CAGTATCCAACG        GGGCCGAAGTACGGC  46 498
SH08_RS05070 NONE
SH08_RS05065 1034868 .. 1034888 -  -4.6   -4.6856   CAAATACTGGAAAAA            CCGTCCTG AAAAG CCAGACGG            CAGACGGGCTGTATT  72 301
SH08_RS05045 1031968 .. 1031991 -  -7.4  -5.80727   AAAAATAATAAAAAA          CGGTAGAATC GTGA GATTCCGCCG           TTAATTGCGTATGTT 100 302
SH08_RS05040 1031023 .. 1031046 - -10.2  -2.91398   AACAAATAAAAGGGA          TCCCCGTCGC ATCG GCGACAGGGG           CAGGGAAGTAACAGG  76 55
SH08_RS05035 1029807 .. 1029822 -  -4.6  -4.25283   AGCCGCTCACGAAAA              TCACGC CGCA GCGTGC               GCACCGACACACCAA  66 366
SH08_RS05030 NONE
SH08_RS05025 NONE
SH08_RS05020 1028547 .. 1028572 - -12.5  -5.18371   CCTGATAAAAGAAAA         CCCCGGCAGCC TGCT AGCTGTCGGGG          TGAATTTGCTGGGGA 100 52
SH08_RS05015 1028209 .. 1028229 -  -9.7  -5.06414   CTCCGTCAATAAAAA            CGCCAGC GGCGATG GCTGGCG            TATGGGGATATAAAG 100 79
SH08_RS05010 NONE
SH08_RS05005 1027240 .. 1027255 -  -4.7   -3.6707   ATGTAATACCTCAAA              GCAGA CCGTGT TCTGC               GAACGAATAGATTTG  57 5
SH08_RS05000 NONE
SH08_RS04995 1026213 .. 1026245 - -12.1  -3.90048   TTGTCCGTAAAAAGA      TAACGCGCCTGCC GGGTAGT AGCAGGCGCATTA      CGCAATAGGTAAACA 100 87
SH08_RS04975 1021993 .. 1022017 - -10.7  -2.78679   CGGCGTGAGTGAAAT          GTGCCGGATGC ATC ACATCCGGCAA          TATTCATTAAAACTG  77 32
SH08_RS04955 1017970 .. 1018001 - -17.3  -3.86776   TAATGAAGGATGAAA      CTGCCGGAAGGCG ATTAAA CGCCATCCGGCAG       CAAATCAAATAATTA 100 38
SH08_RS04915 1012069 .. 1012080 -  -7.2  -3.37796   CGGTAGGACGGATAA                GGCG TTCA CGCC                 GCATCCGGCAGTTGT  64 58
SH08_RS04900 NONE
SH08_RS04895 1009592 .. 1009604 -  -3.3  -2.91429   TAAAACGGTTACACA                CGCCA GGA CGGCA                AAATGGATCCCAAAT  44 137
SH08_RS04890 1008788 .. 1008809 -  -8.7  -3.91084   TGACGGGCAATGAAA           CCTGGCAAA AGAT TATGCCAGG            CGAATGGCGCTTATT  74 36
        fadE 1004588 .. 1004605 - -12.7  -4.56367   TAGCGGATAAAGAAA             CGGAGCC TTTC GGCTCCG              TTATTCATTTACGCG 100 34
SH08_RS04865 1002899 .. 1002912 -  -3.8   -3.6869   CACAGCAATCCGAAA               CCAC TGGCAC GTGG                AGAATAAGCTGCACA  53 287
SH08_RS04855 1002479 .. 1002492 -  -2.4  -3.17194   ACTCTTTTAATTTAA               CATG TAAACG CATG                GTTAATCCTCATATC  43 34
SH08_RS04850 1001883 .. 1001913 - -10.6  -3.19657   ATCAATAATAAATTA      TATCTGCCGCCAG GAATTT CTGGCGGCA-ATA       ATACAAAATTCTTTG  77 124
SH08_RS04830  999245 ..  999272 -  -9.1  -2.55021   AAACAAGCCACGAAT        TCGCCAGGCGG TTGGAG CCACCCGGCAA         TGTCGTAAACCACAG  65 43
SH08_RS04820  997750 ..  997764 -  -4.2  -3.42996   GACGACCGATCATAA               CGGC GAACGGA GCCG               ATGACAAGAAAGTTT  52 43
        mltD  996313 ..  996333 -  -9.7  -5.72622   GGCATAAATAAAAAA            GGCACCG GGGGAAT CGGTGCC            TTTTTATTATCTGGT 100 44
SH08_RS04800  993657 ..  993686 -   -10  -5.47159   GCCGAAGATAAAAAA       GCGATCGCCGCA CTGGAT TGCAACGACCGC        CTGGTTAGCCCGGAA 100 61
        metN NONE
SH08_RS04750 NONE
        metQ  983810 ..  983833 - -14.6  -3.23975   AGCTTGTAAAAATGA          CAAGACGGGC AAGC GCCCGTCCTG           AATGATATTACAAAT 100 60
        rcsF NONE
SH08_RS04735  982560 ..  982578 -   -11  -3.42056   AGTTGGAAGGTAGAA             CAGGCTCA AGG CGAGCCTG             GGACAAAAAAAAGTG  83 89
SH08_RS04730  980782 ..  980802 - -13.3  -5.47821   ATCCATGTAAAAAAA            GGGCCCTGA AAT TCAGGACCC            TTTCTGGCATCAGCC 100 35
SH08_RS04725  979823 ..  979834 -  -7.2  -3.30124   TTGTAGGCCGGATAA                GGCG TTTA CGCC                 GCATCCGGCAATGGT  64 125
SH08_RS04705 NONE
SH08_RS04700  977391 ..  977423 -   -12  -3.76952   CTTAGTTAAGTGAAA      GCCGGATAAGACGC ATCAA ACGTCGCATCCGGC      GAAAGTCAATCAGGA 100 35
SH08_RS04595  952445 ..  952460 - -11.8  -5.15634   TATCGCATTAAAAAA              GCCGGC ATTC GCCGGC               TTCATCTTATTCGTC 100 32
SH08_RS04590 NONE
        dapD  948845 ..  948867 - -10.5  -5.40474   ATCCCTGCAAAAAAA           TCGGGCAGC GTCGT GCTGCCCGT           GTGCATACTTTTAGT 100 36
SH08_RS04580 NONE
SH08_RS04575  947136 ..  947159 -  -4.4  -3.35813   TGGCAGGCCAACGAA          CTGGCGCGACC GCT GG-CGCGGCTG          AAAACGATGGACAAT  51 330
SH08_RS04555 NONE
SH08_RS04550 NONE
SH08_RS04545  940557 ..  940571 -  -5.6  -4.68994   ATGACCATCGAAAAA               CAGGGC GTT GGCCTG               GTGGTTGATCCGATG  75 210
SH08_RS04530  937258 ..  937291 - -10.9  -2.60079   TTACGCGACAACGGA     TGCCCGATGCGACGC TGGC GCGTCTTATCGGGCC      TACAAACGGCCCCGA  76 91
SH08_RS04505 NONE
SH08_RS04500  930172 ..  930185 -  -2.4  -3.03124   TGTGACCGCCGAAGA               GATG GCGCTG CATC                AGCCGAAGTCGGTAA  42 190
SH08_RS04475 NONE
SH08_RS04470 NONE
        dksA  922521 ..  922539 - -11.7  -4.81306   TTGAACAAAAAATAA             GGCGGGA GCATT TCCCGCC             TGTGGTAAACGTGAT 100 54
SH08_RS04460 NONE
        pcnB NONE
SH08_RS04450  919483 ..  919507 - -10.3  -4.21141   TTTGAACAAATTAAA          TTTACTTAATT CAA AATTAAGTAAA          AATAAGTTCACAAGT  91 190
SH08_RS04445  918649 ..  918684 -  -6.4  -4.44548   TAGAGTTAATTAAAA    CAGGGAATAATA TAAAATAGAAAT TATTATTCCCTG     TATATTCATTCAATC  74 59
        ecpD NONE
SH08_RS04435 NONE
SH08_RS04430 NONE
SH08_RS04425 NONE
SH08_RS04420 NONE
SH08_RS04415  912088 ..  912137 -    -8  -2.70932   TGGTGGGGGCAATGA TTTAT-CCGTAGCAGCACTGCCA GAAGG TGACAGTGCTGCTACGTTATCAG GGATAGGTTACCTGG  60 22
        panB NONE
        panC  910328 ..  910358 -   -12  -3.51232   CGTGGGGTAAATTAA       TAACTGGCGCCA TCAGCCG TAGCGCCAGTTA       AGTATTACGCCAGCT  91 30
SH08_RS04395  908695 ..  908726 -  -5.1  -2.62263   ATTCGCTGGAGACGA      TGTC-GCGGCTGGT GAGTA ACCAGCCGCAGGGA      TAACAATCAAGCAAC  49 32
SH08_RS04370  904169 ..  904182 -  -2.4  -3.02511   TCGACTCGGGGAATA               CACT GTCGAA AGTG                CGTGAGATCTTAAGC  42 270
SH08_RS04360  901073 ..  901092 - -13.6  -3.36515   CCGTATTCGGAAATA            TGCCCGGA TCTC TCCGGGCA             TTAAACTGATGACAA 100 187
SH08_RS04350  898942 ..  898963 - -10.9  -3.17362   ACATAATAGCTAACA           TTGACCGCG GATG CACGGTCAA            TATTTCTACAAAAAG  79 51
SH08_RS04345 NONE
SH08_RS04340  897175 ..  897202 - -17.8  -4.59982   GCAGAAGTAAATAAA        TCTGGCGGAGCC TGGG AGCTCCGCCAGA         GCCGTTAAACAGCTG 100 30
SH08_RS04325  891791 ..  891807 -  -6.5  -5.26875   CCGGCAATTAAAAAA              GCGGC TAACCAC GCCGC              TTTTTTTACGTCTGC  89 44
SH08_RS04300  882561 ..  882589 - -10.2  -2.84325   TTGGTGTAAAGATTA        TTGCCCTCACCC TGTAC GGGTGAGGGCGT        AGAGAGATTAATGCG  75 33
SH08_RS04285  880136 ..  880155 -  -7.1  -2.64794   GGGAAGGGGAGATTA            TCCGCCC GCGATG GAGCGGA             TAAATCTGTCAACTA  52 41
SH08_RS04275 NONE
SH08_RS04270 NONE
SH08_RS04265  876691 ..  876703 -  -3.3  -3.72893   GAGTCTGCGATGAAA                CGTCA CGT TGGCG                GCGTTGCGGAATATC  53 263
        coaE NONE
SH08_RS04250 NONE
SH08_RS04245 NONE
SH08_RS04240  873673 ..  873690 -  -4.1  -4.62069   TCGCTATTTGAAAAA             CTGGAAT ATGA ATTCCCG              GACAGGCATATAACA  70 318
SH08_RS04115  845999 ..  846016 - -14.1  -5.60993   TCGGGCATAAAAAAA             CCCGCGC AATG GCGCGGG              TTTTTTGTTTGACTG 100 50
SH08_RS04110  844380 ..  844392 -  -3.3  -2.62515   AATTCTTCGACATCA                CACGG TTT CCTTG                TTGTTTTCGTTGTGT  42 10
SH08_RS04105 NONE
SH08_RS04100 NONE
        leuD  841240 ..  841259 -   -15  -3.64599   GGACGATAGCGGAAA            GCCCGGTC ATTT GACCGGGC             AAGGGGATTAATTCA 100 33
SH08_RS04080  837926 ..  837950 -  -7.2  -3.64192   AAAAAGAGTGGCAAA          GGACTTGAGA AGGAG CCTCAAATCC          CTTCGCCGGCGTTAT  68 138
        tbpA NONE
        thiP NONE
        thiQ  834596 ..  834622 -  -6.5   -4.3898   ATCAGGCCTACAAAA         CGCACTACCCG TAGGT CGGATAAGGCG         TTCACGCCGCATCCG  72 51
SH08_RS04050  830774 ..  830784 -  -2.4  -2.87132   TCGTGTCCTTATAGA                 GTCG CAA CGGC                 CTGGGCAGCCTGTGC  41 8
SH08_RS04045  829209 ..  829222 -  -8.1  -3.50393   GTGTAGGCCAGATAA               GACGC GTCA GCGTC                GCATCAGGCGTTACA  68 57
        araD  828220 ..  828240 -  -8.3  -5.19261   AAATCCATCAAAAAA            CCAGGCT TGAGTAT AGCCTGG            TTTCGTTTGATTGGC 100 59
SH08_RS04035  825856 ..  825872 -  -2.1  -3.63744   TTTTTGCTCAAAATA              GCCCAAG TTG CCCGGTC              ATAAGTGTAGCAAAA  49 1
SH08_RS04030 NONE
SH08_RS04025  822038 ..  822053 - -10.4  -5.72622   GGCAGAAACAAAAAA              TCCCCG GACT CGGGGA               TTTATGTACAAGAGG 100 78
SH08_RS04010  817142 ..  817152 -  -8.2  -3.35813   TTCCATTTCAATTAA                 CCGC ACT GCGG                 ATTACGTGGTAAATC  69 47
SH08_RS04005 NONE
        pdxA NONE
        ksgA NONE
        apaG NONE
        apaH  812356 ..  812369 -  -2.3   -4.4572   AACACCTTAAATAAA               CCCGT GATT ATGGG                CCGCCATACCTGGGA  63 455
SH08_RS03940 NONE
SH08_RS03935  801629 ..  801642 -  -8.1  -3.30124   CCGTAGGCCTGATAA               GACGC ATCA GCGTC                GCATCAGGCAGCGCA  66 46
SH08_RS03930 NONE
        caiC NONE
SH08_RS03920 NONE
SH08_RS03915  796979 ..  796992 -  -5.9  -2.68775   CGATGAGCAAATTTA               CGCGC GCCT GCGCA                ATAACAGTCGGGAAA  50 233
SH08_RS03905  796511 ..  796530 -  -7.8   -3.3449   ATCGAATAACTAATA            CGGTTCTC TGAT GAGGACCG             TTTTTTTTTGCCCAT  66 0
SH08_RS03890 NONE
SH08_RS03885  791608 ..  791621 -  -3.9  -3.65224   ACTTGATCTCAATAA               TTTGT AACC ACAAA                ATATTTGTTATGGTG  53 60
        rpsT  783190 ..  783203 -  -9.5  -5.64274   GCAGGCATAAAAAAA               CCCGC TTGC GCGGG                CTTTTTCACAAAGCT 100 56
SH08_RS03835  782080 ..  782094 -  -2.8  -2.72799   GGGGGAGATAGATTA               GTTGTA CAT TACCAC               GATTTTGACTCGGCT  41 161
SH08_RS03820  779000 ..  779026 -  -3.6  -5.34365   GGAGAATAACAAAAA         TGGTCATCTGGA GCT TACAGGTGGCCA         TTCGTGGGACAGTAT  80 169
SH08_RS03800 NONE
SH08_RS03795  772930 ..  772940 -    -4  -3.23975   ATTCCTCAAAAATCA                 TCAT CGA ATGA                 ATGGTGAAATAATTT  51 147
SH08_RS03790  772318 ..  772335 - -12.7   -5.8187   TAGCGAATAAAAAAA             TCCCCCC GAGC GGGGGGA              TCTCAAAACAATTAG 100 37
SH08_RS03775 NONE
SH08_RS03770  767958 ..  767977 -  -7.8  -4.13654   CCGCTAAATGACAAA            TGCCGGGT AACA ATCCGGCA             TTCAGCGCCTGATGC  76 150
SH08_RS03725  760308 ..  760337 - -13.7  -4.64144   AATAAGGTTGAAAAA       TAAAAACGGCGCT AAAA AGCGCCGTTTTTT        TTGACGGTGGTAAAG 100 45
SH08_RS03700  755123 ..  755135 -  -4.7  -3.80573   TGGATTATCAGGAAA                GCCTG TGG CTGGC                GTCTGGCTGGGTCGT  58 98
        yjjX  753483 ..  753507 - -15.7  -2.65298   TTTAGCGAGTACAAC          CGGGGGAGGCA TTT TGCTTCCCCCG          CTAACAATGGCGACA 100 518
SH08_RS03675  749417 ..  749438 -  -2.9  -5.03145   CAAGGTTTGAAAAAA           CCTGCACGGG TGA CCCGC-CACG           AAATTGAGGATGCTA  77 209
SH08_RS03650 NONE
        lplA  743847 ..  743868 - -10.1  -4.25401   CAAATCGAAGAGAAA           GTTGCCCGC ATGG GCGGGTAAC            TACCTTACAGCCCCC  93 25
SH08_RS03610 NONE
SH08_RS03605  735038 ..  735092 - -13.8  -2.57931   CGTAGGCCGGATAAG GCGTTCA-CGCCGCATCCGGCAGTTG GCGCA CAA-TGCCTGATGCGACGCTTAACGC GTCTTATCATGCCTA  95 380
        rsmC  727396 ..  727407 -  -7.2  -3.30124   TTGTAGGTCGGATAA                GGCG TTCA CGCC                 GCATCCGACACGGTA  64 54
SH08_RS03555 NONE
SH08_RS03550 NONE
SH08_RS03545  726516 ..  726530 -  -5.8  -3.53224   TATCTGGCTTGCAAA               TGATAA AAA TTATCA               TATGATATTGGTTAT  59 341
SH08_RS03535  725375 ..  725393 -  -5.9  -3.98282   GGTACATTAACCAAA             GCCGGAC GTTAA GCCCGAC             GGAGAGAGAAATATT  66 274
SH08_RS03520 NONE
SH08_RS03515  722339 ..  722374 - -13.4  -3.26947   TAACTTTTATAGTAA    CACACGGAGGAGAG GAGGCTGT CTCTCATCCGTGTG     CTTAAGCGAGGCAAT 100 42
SH08_RS03510 NONE
SH08_RS03505  720989 ..  721001 -  -3.3  -2.78384   TTGTGTCGCAGTATA                CCGCC AGA AACGG                GGATTAATACTCTTT  43 29
SH08_RS03500  720446 ..  720459 -  -5.2  -4.28254   GGGTAACAGCTAAAA               CGCG GCGTTT CGCG                GTTCAGGAAATGAAG  68 28
SH08_RS03495  717873 ..  717907 - -15.8  -3.33261   TTGTAAGCCGTAGAA     GGCGTGTAGGTCGCAC CCT ATGCGACCTACACATC     AGTCAGGAATTACCC 100 35
SH08_RS03485  715631 ..  715645 -  -5.6  -3.14468   TGTGAGCATAGGTAA               GCGGGA ATT TCCCGG               TATTTATCTTTTGAT  55 84
SH08_RS03480  714092 ..  714119 - -12.2   -4.2679   TAATCGCCATGAAAA        TGCCCGATAAGCA AAA TG-TTATCGGGCA        TAAGGAGATTAATCT 100 34
SH08_RS03470 NONE
SH08_RS03465  709869 ..  709886 - -14.1  -4.51812   TCTGATAAGAACAAA             GCCCCGC CGAA GCGGGGC              TAAACACGGTTAGTG 100 35
SH08_RS03460 NONE
SH08_RS03455  708638 ..  708666 - -14.5  -2.86124   TTGAGTGAAATATCA        GGCCGGATGCGGC TGC GCCTTATCCGGCC        CATAACCCCTTACTT 100 35
SH08_RS03440  705981 ..  706007 -  -7.4   -5.0538   CTTTATCGTAAAAAA        TG-CCCTCTTG GGTTAT CAAGAGGGTCA         TTATATTTCGCGGAA  89 65
SH08_RS03435  701914 ..  701936 -  -9.1  -2.89569   TCCGTAAATTAAGCA           GCGGCCCAA ATTCA TCGAGCCGC           AGAAGAAGAAATTGC  67 181
SH08_RS03430 NONE
SH08_RS03425  698879 ..  698897 - -11.7  -5.38549   GTGAAATAATAAAAA             GCGCACC GGAAA GGTGCGC             CAGAAAATAATGTTC 100 39
SH08_RS03420  698242 ..  698259 -  -2.8  -3.57185   CGTACTGAAACAATA             GATTTT TACTGC AAAATC              AGACTGGTAAATATT  48 108
SH08_RS03415 NONE
SH08_RS03410  695512 ..  695525 -  -2.4  -3.07816   TGGTCAGGTATTGAA               GATC CGCTTC GATC                AGGGGATGGGCTACT  42 255
SH08_RS03390  688982 ..  688992 -  -8.2  -3.00585   CATGAGAGGAAATCA                 GGCG CTT CGCC                 GCTATTTCGAATTTA  65 38
SH08_RS03380 NONE
SH08_RS03375 NONE
SH08_RS03370 NONE
SH08_RS03365 NONE
SH08_RS03360  682467 ..  682481 -  -3.6  -3.75153   TCCCTTTAAGGCAAA               TCAATA AGA TATCGA               GAAGTATACGTAGCG  56 55
SH08_RS03355 NONE
SH08_RS03350  680334 ..  680347 -  -2.4  -3.75629   GAGTGGTAAGGGAAA               CTTC CCTCAT GAAG                TGACCACTTGTAGCT  51 18
SH08_RS03340 NONE
SH08_RS03335 NONE
SH08_RS03330  677194 ..  677213 -  -2.9  -2.57132   CGGGCGGCTGACAAC            CGTTTAA GCCGTT TCAAACG             TTCCTTTCACGCAGG  41 9
SH08_RS03325  675837 ..  675855 -  -3.8  -4.10161   CAGGAGTGCGCAAAA             TGATGCGA CAA TCACTTCA             GGCTGTTTTACCTGA  60 391
SH08_RS03305 NONE
SH08_RS03300  674206 ..  674230 -  -8.6   -3.8512   GACTTATTATAATAA          GCGCAAGG GTAAACGTT CCTTGCGC          TTTCTTAAATTAAGA  75 128
SH08_RS03290  672919 ..  672946 -  -5.4  -4.11216   TCTGCACCTGCAAAA        CGGCGGCAGCTG GCGT CACCTGGCGCTG         GGCGTGGCTGGCTGG  65 305
SH08_RS03270  668639 ..  668652 -  -8.1  -3.50393   TTGTAGGCCAGATAA               GACGC GTCA GCGTC                GCATCTGGCATAAAC  68 169
SH08_RS03230  661520 ..  661540 -  -4.7  -4.06677   AACAAATAAATACAA            GACAATTGG GGC CAAACTGTC            CATATCATAAATAAG  61 41
SH08_RS03215  658914 ..  658926 -  -2.7  -4.56597   GGTGGTCTTCAAAAA                CTAAA GAT CTTAG                TTTAACTATTTGTTT  61 243
SH08_RS03205 NONE
SH08_RS03200  656475 ..  656494 - -12.1  -2.69246   GACAAATTGATAGCA            GGGCCCC TTTACC GGGGCCC             TGAAGCGTTAGTTTT  83 33
SH08_RS03195  655246 ..  655274 -  -3.8  -4.32482   AGCCATAATCGAAAA       GGCGCGGATGTCT ATTA AGGCATCCG-GCT        AATCTGTAAGCAATA  63 208
SH08_RS03180  652892 ..  652902 -    -4  -3.89346   TCCTGACGGGATAAA                 TTCA TAC TGAA                 GAACCTATTTAATCA  57 510
SH08_RS03175 NONE
SH08_RS03170 NONE
SH08_RS03165  651266 ..  651286 -  -6.8   -3.5511   TTCCAGCCAGAAATA            CCGGGAAC CTGTT GTTACCGG            GCGATGAGTGCGAAC  63 19
SH08_RS03160 NONE
SH08_RS03155 NONE
SH08_RS03150 NONE
SH08_RS03145 NONE
SH08_RS03140 NONE
SH08_RS03135 NONE
SH08_RS03130  644703 ..  644716 -  -2.4   -3.6878   ACATAGTGGAAAATA               TGCT TTGTTC AGCA                TGCTGAACCGTAATG  49 258
SH08_RS03125 NONE
SH08_RS03120  642937 ..  642950 -  -2.4  -3.09749   TATTGCGAACAGACA               TGAG TTTCTC CTCA                GACTGGTAAAATGCC  43 23
SH08_RS03115  640881 ..  640892 -  -5.8  -3.21276   CGTCCTCTCATAACA                GGGT AGCG ACCC                 ATCATTATCCGACTG  55 103
SH08_RS03110 NONE
SH08_RS03105 NONE
SH08_RS03100  638145 ..  638168 - -13.2  -2.67129   CTAATCAATAAAATC          CTGCCCCATA TCTA CATGGGGCAG           TTGTTCATTCTTTTA  91 38
SH08_RS03085  637143 ..  637164 -  -4.5  -3.44051   TGGTTATCATTACAA           TTGGAAATA AAAT TGTTTCCAA            TAGACATTTTTAACA  55 150
SH08_RS03080  636553 ..  636565 -  -4.1   -4.1673   GAATCGGTTAACAAA                GGATT CAT AACCC                ATACTCCAGACGGAA  61 17
SH08_RS03075 NONE
SH08_RS03070  633171 ..  633186 - -11.8  -4.19258   ACATTCCAGCTAAAA              GCCCGG CAAG CCGGGC               GTTAACACATCAGAA 100 35
        fecB NONE
        fecC NONE
        fecD NONE
SH08_RS03050  629452 ..  629470 -  -7.4  -4.10657   TCAGAGTCCGGAAAA             GTTCAGCC CCA GTCTGAAC             AGGCTTGCTGGCGCC  73 88
SH08_RS03035 NONE
SH08_RS03030  626001 ..  626019 -  -8.9  -3.05844   TTGGCCACCTGAACA             GAGGTGA TATGC TCACCTC             AGAACAACACAGGTG  62 315
SH08_RS03015  625479 ..  625494 -  -4.6  -4.18762   AAGTTTTAGTTAAAA              TCCCCC ATCA GCGGGA               TATGGGGATCTCTGG  63 0
SH08_RS03000  620741 ..  620758 -  -5.5  -2.96598   CAATTAAGGGACATA             GCCAGAT ACGC AACTGGC              TGATGCAAGCAGTCT  52 213
SH08_RS22955  618407 ..  618426 -  -7.2   -3.4072   TACTTTTCAGTACAA            GC-GACTGT ATT ACAGTCTGC            CATATATGATTACCT  66 119
SH08_RS02960  616787 ..  616806 -   -15  -2.89607   TTAAAACAGTAATCA            TCCCGGGC AAAT GCCCGGGA             ATTATTCTAGGATTA 100 288
SH08_RS02945  613997 ..  614010 -  -3.8  -3.57883   AGAATATGTGCGAAA               GAGG GCAGCG CCTC                AGATCAGCGCTGCGA  53 48
SH08_RS02935 NONE
SH08_RS02930  611398 ..  611415 - -12.7   -4.3898   ATTAGTGCCAGAAAA             GCAGCGC TTTC GCGCTGC              ACGTAGGGGGGCTGT 100 40
SH08_RS02925  609986 ..  610005 -  -4.2  -2.57931   GTGATTGCGCATAAC            TTCTCCCA ACGT CGGGGGAA             TCTTCAATCTTCCCC  45 69
SH08_RS02920  608911 ..  608938 -  -4.2  -2.80816   GGTTCACTCATGAGA        TATCCTCCAG TTTCCTGC CTGGAGTATA         GGCAACGTCCGGCAA  46 71
SH08_RS02915  607257 ..  607280 -   -14  -3.46482   AACCGAATGAACGAA          TAAAGGGAGC GAAA GCTCCCTTTA           TTATTGTTAGCAAAG 100 149
SH08_RS02900  603239 ..  603250 -  -7.2  -3.30124   GTGTAGGTCGGATAA                GGCG TTCA CGCC                 GCATCCGGCAATAAC  64 58
SH08_RS02895 NONE
SH08_RS02890  599781 ..  599800 -   -15  -5.47431   GTAAGAGATAAAAAA            GGCCGGAG CATG CTCCGGCC             TTCGTTTTCATCACT 100 50
SH08_RS02880  597482 ..  597500 -  -7.4  -2.74322   TTGAAGCGTTTAAAC             TCGGTTAC GAA GTGACCGA             TCCAGAAGAGCTGGA  57 402
SH08_RS02870  596102 ..  596134 -  -6.3  -2.50387   CTGCATAAAATAATG      TGATGCCGGGA TGGTTTGTATT TCCCGGCATCT      TTATAGCGATAGCAA  53 41
SH08_RS02850  592138 ..  592163 -  -8.3  -4.93877   CGTGAGTAAACAAAA         CCCAGACATCA TGGA TAATGGCTGGG          CTTAATTGAGCGTAG 100 45
SH08_RS02845 NONE
SH08_RS02835 NONE
SH08_RS02830 NONE
SH08_RS02825  589785 ..  589810 - -10.5  -4.61231   TTACAGCGGTAAAAA         GTCTGGCTC ATTATAGG GAGCCAGAC          TTTTATTACCAACCG 100 44
SH08_RS02820  589338 ..  589357 - -10.7  -3.14468   TGTCATCAGACTTAA            TCCGGGC ATGATA GCCCGGA             TTTCCATCAAGATTA  79 38
        treR  585089 ..  585102 -  -8.1  -4.92239   GGAAAAATTTAAAAA               CGGGA ACGT TCCCG                AAACGCAGCGAAGAT  95 65
SH08_RS02805 NONE
SH08_RS02800  581859 ..  581884 -  -9.8  -4.61868   TACTGACAGACAAAA         CCCCGG-AATG ACCGG CATTACCGGGG         CTTAGGGAAGATTTA 100 38
SH08_RS02795  579311 ..  579342 - -12.2  -2.65279   CAATTGCCAAATGTA      GGCCGGATAAGGCG TTTA CGCCGCATCCGGCA       TTTGCTTAGCTCAGA  83 48
SH08_RS02790  578435 ..  578448 -  -5.2  -4.58685   AAAGTGGTCGAAAAA               GCCG ATAACG CGGC                GCAAGTCAAAGACGC  75 320
SH08_RS02775  576073 ..  576108 -  -8.3  -2.79796   CGGCATTTGAGCATA    GTGCCTGATGCGACGC TTGAT GCGTCTTATCAGGC-C    TACAGGTGCACCGTA  64 74
SH08_RS02765  573425 ..  573446 - -15.9   -5.1356   GCGCAGCAATAAAAA           CGCCTCTCC GTGT GGAGAGGCG            CAGGAGATTACGCGT 100 33
SH08_RS02740  567607 ..  567619 -  -7.7  -3.15579   GCAAGCGGCCATGAA                CAGCA AGG TGCTG                GTCGACCTGCGCTTG  61 371
SH08_RS02705  560210 ..  560223 -  -5.3  -4.13014   GCCAGAGGGTTAAAA               TTCAG ACAG CTGAA                AAATGCAAAACTGCC  65 183
SH08_RS02700  558676 ..  558700 - -14.3  -3.73647   GCTATGCAGTAATAA          GACGGCTCCTG ATT CAGGAGCCGTT          GATGTTTCTGGGGGT 100 40
SH08_RS02690  557489 ..  557519 -    -7  -3.16743   AACTCAGAGACTTAA       TTCCCCTATC CCATAGATAAC GATAGGGGAA       AATTATTTTTGCAGA  59 57
        cpdB  553393 ..  553406 -  -6.7  -3.30124   TTGTAGGGCGGATAA               GATGC GCCA GCATC                GCATCCGCCAATAAA  61 84
SH08_RS02665  551949 ..  551992 -  -2.4  -2.73334   AGGAAGCAGACATGA TTGCTCCCGGCATCCCGTC ATTATCA GAGAGGATGC-GGGAGGAT GCCACTTTAATTAAC  40 40
SH08_RS02660  550855 ..  550873 -  -4.6  -3.83318   TTCTTAATAAGATAA             GATGTATT TTA AATGCATC             TTTAAGGCAAAAGCT  59 86
SH08_RS02655  549691 ..  549701 -  -6.8  -3.14132   GGTCTGGCGCAGGAA                 GGTG TGG CACC                 GAAAGCGTTCGCTAA  57 488
SH08_RS02640  546524 ..  546537 -  -3.7  -2.71731   TGTATTCGTTAATCA               GCAGG TTAG CCAGC                CACAAAAAGCCATTG  44 410
SH08_RS02630  545426 ..  545444 -   -16  -4.72333   AACGAGACGTAAAAA             CGCCGACC ATT GGTCGGCG             TTTTGCTTTCTATTT 100 52
SH08_RS02600  543301 ..  543318 - -12.7  -5.75342   GTTTTTCAAAAAAAA             GCCCCCT GCGA AGGGGGC              AAAGCAAACTATGGC 100 66
SH08_RS02565  537354 ..  537395 - -10.9  -3.47762   AATAGCCAGGAAATA CTACGCCGGATAGCGCGAA CTTC TCCACGCTACCCGGTATAA  ACGACAGATTACAGG  83 34
SH08_RS02560  536297 ..  536329 -  -2.1  -3.45087   ATGAATTCAATAACA     TTGTCGC--GCCACT GGCAG AGTGGGAAGCGACAA     ACCACCTGGAACAAC  47 237
SH08_RS02550  535236 ..  535247 -  -2.2  -2.82327   TGTGCACAGGTAAAC                GCAT AGGG ACGC                 AAAGCAATGTAAAGC  41 62
SH08_RS02545  534814 ..  534825 -  -7.2  -3.30124   TTGTAGGCCGGACAA                GGCG CTCG CGCC                 GCATCCGGCATTGTT  64 60
SH08_RS02435  511290 ..  511303 -  -6.7  -4.28049   TCCAAAATTTGAAAA               GTGCT GCAA AGCAC                AGACCACCCAAGCGG  74 493
SH08_RS02410 NONE
         psd NONE
SH08_RS02400  504775 ..  504801 -    -3  -5.40072   TTGTGGCGAAAAAAA        CGCGGCTGG TTTATGTACG CCA-CCGCG         CTGGCTATTTTCGGC  85 114
SH08_RS02375 NONE
SH08_RS02370 NONE
SH08_RS02365 NONE
SH08_RS02360  497810 ..  497830 - -19.7  -4.52589   GGTTTCCATACAAAA            CGGCCCGCC ATA GGCGGGCCG            GATTTACATTGGCGA 100 45
SH08_RS02355  496626 ..  496643 - -11.3  -4.46581   GAAAAGCGGAGAAAA             GGTCCGA AAAT TCGGACC              CGATGGAATTTTACT 100 36
SH08_RS02350  495550 ..  495573 -   -11  -3.90559   AGCAATAAGCAATAA          CGGTACGACA GCTG TGTCGTGCCG           TTTGTTTTTTCTGCG  88 484
SH08_RS02325  493290 ..  493307 -  -5.7  -3.38314   TGCAACGGGCAAAGA             TTAAACT TCCC AGTTTAA              TGACAGGTTGCTGTA  57 190
SH08_RS02320  492102 ..  492146 -  -8.6  -3.31322   TTGAATGCTTGAGAA TTTGT-AGGCCGGATAAGGCG TTTA CGCCGCATCCGGCATGACCAA CGATCACGTTATCAG  69 87
SH08_RS02300  487668 ..  487690 -  -5.6  -3.62046   CCAGGGCTTTAAGAA           TTTCGTGCTG ATG CAGCAAAAAA           TGGCGGCGGGTGAAA  58 334
        aspA  485688 ..  485707 - -13.6  -5.55769   GCTCACAAGAAAAAA            GGCACGTC ATCT GACGTGCC             TTTTTTATTTGTACT 100 52
SH08_RS02285  484286 ..  484305 - -16.4  -4.55295   TCGGCGAGAAAGAAA            GCGGGGCG TGAA CGCCCCGC             GATTGATCATTACAG 100 35
SH08_RS02280 NONE
        dipZ NONE
SH08_RS02270  481589 ..  481600 -  -3.6  -2.53876   TGTCAGGTCAATGCA                CCAC CCTG GCGG                 CAGCGGGCGAAGCGC  44 1
SH08_RS02265  481362 ..  481381 - -13.6  -4.98531   TCCTGAAACGAAAAA            CGGACCTC CGTG GAGGTCCG             TTTATATGAATTTGG 100 38
SH08_RS02260  479142 ..  479168 -  -5.1  -5.10461   TTTATGTAATAAAAA         TTATGCGGCAA ATAAA TTGCCGCAACA         TATTATACCAACAGG  81 96
        cadB  477483 ..  477522 -  -2.7  -5.08824   TCTCCAGGTAAAAAA  GGCCCCTCCCAACACAT GGGACA AAATGAAAGGAGGAGCC   TCGGAAAATACTTTT  73 43
SH08_RS02250  475278 ..  475299 - -14.5   -5.1861   CTTATGAGCAAAAAA           GGGAAGTGG CAAG CCACTTCCC            TTGTACGAGCTAATT 100 39
SH08_RS02245  473704 ..  473715 -  -4.4  -4.25016   ATCACTAATAAATAA                CCAT CAAA ATGG                 TTTAAATGACTTATT  63 107
        lysS  471999 ..  472030 - -20.4  -2.71364   GGATTTGCGGAACGA      TGAACGAAGCAGTC GCCT GACTGCTTCGTTCA       TTAAAGTGAAATTTA 100 38
SH08_RS02215 NONE
SH08_RS02210  467946 ..  467956 -  -3.2  -3.90048   TTGTGGGTAAAAATA                 CACA TAA TGCG                 GGTGACATAATAGTT  53 227
SH08_RS02200  466208 ..  466239 -  -8.7  -4.13767   TTTGTTATTCGAAAA      TGGCGTGCCGC GTAGTCACGG GCGGCACGCAA       AGTGCATTTATAAGA  83 33
SH08_RS02195  464470 ..  464495 -  -3.9  -3.70689   TACAATCGCAAAAGA         GGTGGCCAGGGG GAT CACCTGG-CAGC         ATGCTGCCAGGCGCT  53 53
SH08_RS02190  463656 ..  463684 -  -6.1  -4.45151   AATAGCTAACGAAAA        TGGCCTGAT GCGATATGTTT ATCAGGCCA        CGTCTTAATGTAATG  74 113
SH08_RS02170  459446 ..  459457 -    -3  -4.58685   AAAGCGCGTGAAAAA                CAAA CATT TTTG                 AAATATTTAGTTTTA  65 131
SH08_RS02165  456961 ..  456979 -  -8.8  -5.85178   AACAGGCAAAAAAAA             GCGCGG GGTGGGG CCGCGC             AAAAAGTATGACATT 100 143
SH08_RS02160  455882 ..  455892 -  -3.2  -4.07968   GAAGACATAATTAAA                 CTCC TGC GAAG                 GCGAGCTTCGTGACA  58 144
SH08_RS02155  454481 ..  454514 -  -9.7  -4.54727   GCTCGCAAAGCAAAA     TTAAGCCAACCTTAA GTTC TTAAGGTTGGCTTTT      ATGTTTGCTGGATTA 100 48
SH08_RS02150  452784 ..  452795 -    -3  -2.93073   CGTCTTCAACAATCA                GAAT TTTC ATTC                 ACTCACTCTCCTGCA  44 20
SH08_RS02145 NONE
SH08_RS02140  450859 ..  450889 - -12.6  -2.66593   ATAAGCTGAAACGGA       TGGCCTGATGTGAC GCT GTCTTATCAGGCCA       ATTGAACTCTTAAGG  88 160
SH08_RS02115  445160 ..  445214 -   -14  -3.21924   GTAGGCCTGATAAGA CGCGCAAGCGTCGCATCAGGCATCTG GCA CCGTTGCCGGATGCGGCGCGAGCGCC TTATCCGGCTTACCG 100 53
SH08_RS02110  444114 ..  444137 -  -4.5  -2.80994   GGGAATTCGATGACA          GTGCGGGAGG GCGGG CCTCCCGG-C          GGGTTATTGCGTTGG  49 29
SH08_RS02105 NONE
SH08_RS02100  442102 ..  442113 -  -5.8  -3.30124   CTGTAGGCCGGATAA                GGTG CTTG CACC                 GCATCCGGCATCAAC  57 91
SH08_RS02095 NONE
SH08_RS02090 NONE
SH08_RS02085 NONE
        phnH NONE
SH08_RS02075 NONE
SH08_RS02070 NONE
        phnK  436822 ..  436833 -  -7.2  -3.30124   TTGTAGGCCGGATAA                GGCG TTTA CGCC                 GCATCCGGCACCGGC  64 41
SH08_RS02060  436068 ..  436082 -    -7  -2.52529   GATAATCATGAAGAG               GCTCCC ATT GGGTGC               AGGCGGTCGGCGACG  55 1
SH08_RS02055 NONE
SH08_RS02050 NONE
SH08_RS02045 NONE
        phnP  433094 ..  433120 -  -2.2  -4.45083   GGGAGAGGGAGAAAA         CGAGCGCAATAT TCA ATATCGAGCACA         ATCGGTCCCCTCGCC  60 92
SH08_RS02025  430917 ..  430932 -  -6.8  -3.13475   TAAGGGGACAGGTAA              CTCCGC GATG GCGGAA               TTACCTTTTTCTTAT  59 37
SH08_RS02020  429810 ..  429824 -  -8.6  -2.91264   CCCGCCATCGATATA               TATGGC GTG GCCATA               AATAACCTCTCTGCA  65 151
SH08_RS02015 NONE
SH08_RS02010 NONE
SH08_RS02005 NONE
SH08_RS02000 NONE
SH08_RS01995  423416 ..  423447 - -10.9  -4.65933   TATTTTTAAAATAAA      TACTTTTGGGGGC TTCAGC GCCCCCAAAAGCG       AGTGACATTAATTTG 100 33
SH08_RS01990 NONE
SH08_RS01985 NONE
SH08_RS01980 NONE
SH08_RS01975  418375 ..  418400 - -11.9  -4.10552   CGTGACGAAACGAAA         TACCGCGTGAC AGCC ATCACGCGGCA          GACATTTTATTTTTT 100 32
SH08_RS01970  417781 ..  417804 -    -6  -2.53581   CAGACCTGCAACCGA          TGGGC-CGTGT CAG ACACGAGCGCA          GCAGTCAACGTTATT  52 11
SH08_RS01965  416028 ..  416047 - -13.6  -5.66684   GAATGGATAAAAAAA            CAGCCTCC GAAA GGAGGCTG             TAGAAAGGACGGTAT 100 40
SH08_RS01960  415101 ..  415130 - -12.9  -3.30124   TTGTAGGTCGGATAA       GGCGTTTATGCCG CATC CGACATCAACGCC        TGATGCGACGCTTAA 100 174
SH08_RS01915  404297 ..  404328 -   -13  -2.60392   CATCCGGCAATCAAT      GCCTGATGCGACGC TGTC GCGTCTTATCAGGC       CTACAAACCGTTACC  91 64
SH08_RS01910 NONE
        actP  402174 ..  402197 - -16.8  -2.79321   GGGAGAGGAAGAGTA          TTCCCCGGTC AGAC GACCGGGGAA           GGGGAGAGATTAATG 100 35
SH08_RS01900  400603 ..  400661 - -15.5  -2.76456   AAAGCGACGTAACCA GGCCCGAGGTAATCTGAAAAAGGTGCAA TCTT TTGCACCTTTAACAGGTTAGCTCGGG-C TAACATTCATGATTC 100 101
SH08_RS01880  395979 ..  396008 - -12.9  -3.19389   CAATGGATGGAGCAA       TTACCCGCGCG GGAGTTAA CGCGCGGGCAA        TAAAATTACAGGCGG  95 31
SH08_RS01870  393685 ..  393707 - -13.5  -5.28176   GCCAGCCATAAAAAA           GAAGCCTCC GTTAT GGAGGCTTC           TACGTATCAGGTCAA 100 32
SH08_RS01860  389977 ..  389995 - -12.4  -4.55128   ACTCTGAAAGGAAAA             GGCCGCTC AGA AAGCGGCC             TTAACGATTACAGCA 100 33
SH08_RS01840  387271 ..  387294 - -14.6  -3.79668   ATGTAATGCAGGAAA          GCAGGCTGGA GCTA CCCAGCCTGC           AGTGAAATTAAACTG 100 214
SH08_RS01820  382173 ..  382193 - -12.6  -5.00267   AACTATAAAAAGAAA            GGGCTTCC CAGGT GGAAGCCC            TATTTCTTTTATGGA 100 34
SH08_RS01795  378148 ..  378167 -  -4.3  -4.77567   ACGTTCAGAAGAAAA            GTGAACG TACTCT CATTCAC             AACCTAACGATGAGG  71 300
SH08_RS01770  372855 ..  372872 - -11.3   -5.1101   TGATGATGTAAAAAA             GCCGGAT GATC ATCCGGC              TTTCTTCTGGGTTGC 100 150
SH08_RS01730 NONE
        malE  364086 ..  364119 -  -9.5  -2.88118   TTATCCGACAACAAC     TGCCTGATGCGACGC TGAC GCGTCTTATCAGGCC      TACATACGTTTCGGT  70 89
        malF NONE
        malG  361492 ..  361509 - -12.7  -5.99154   GACGAAAGAAAAAAA             GGCGCTC CGTG GAGCGCC              GAATAACAGTCACAA 100 96
        xylE  359693 ..  359725 - -11.4  -4.73388   AAGCGGGAGTAAAAA     GT-CAGCACGCCG AAATGGCG CGGCGTGCTGGAC      AGGAAGATTACAGCG 100 33
SH08_RS01695  358696 ..  358723 -  -8.5   -3.6215   CTAAGTCATGGGAAA        GGTGCCAGT TTTCGCACTC ACTGGCACC         TTCATTCTTAATGGC  73 33
SH08_RS01670 NONE
SH08_RS01665  353611 ..  353659 -   -13  -3.30243   ATGTAGGCCGGATAA GGCGTTCACGCCGCATCCGGCA ACCGA TGCCTGATGCGACGCGGTCGCG TCTTATCAGGCCTAC 100 73
SH08_RS01655  350025 ..  350054 -  -7.2  -3.85542   TGACAAGAAAATCAA       TACGGCCCGAAA TATAGC TTCCAGGCCATA        CAGTATTTACTCAAA  70 32
SH08_RS01650  349338 ..  349358 -  -4.5  -4.61527   AAAACGGCGGAAAAA            GGCGGTCGC CCG GCGTCCAAC            GGTAAGCGTTTTACC  72 203
SH08_RS01640  347603 ..  347623 - -11.2  -3.45742   GCACTATGAACAAGA            TGCCGGAT CATGC ATCCGGCA            ATTCACTTAAAAACG  83 32
SH08_RS01625  340725 ..  340735 -  -2.6  -2.80079   AACAGTGAAAAAATT                 TAAT ATG ATTA                 CAACTAAAGAAATAT  42 271
SH08_RS01620  337974 ..  337989 -  -6.8  -5.07053   AAGCAGCGGAAAAAA              TCACCG ATCT CGGCGA               ACAAATTGTGATTCG  90 514
SH08_RS01595  331350 ..  331370 - -10.4  -5.05228   ATCAAATTAGAAAAA           CCCCGGTCC ATAA GG-CCGGGG            TTTTTTGCATATCAA 100 512
SH08_RS01565 NONE
SH08_RS01560 NONE
        purH NONE
SH08_RS01550  322746 ..  322773 - -10.4  -4.36914   CGGCGCTGGAGAAAA        CGGGCGGCAACA AAAC CGAAGCCGCCCG         TCAGTTAGGGATCAC  90 71
        zraP  318975 ..  319016 -  -4.5  -2.62616   GCAGTGGCGATACCA CGA-CGCGAGAGTATCGC TGGCAGG GCGATAACCTCACGCTCA TCAATATCAATGTTT  45 449
SH08_RS01500  314459 ..  314474 -  -7.5  -3.15008   TCCGACAAGAAATTA              GCCCC GCAAAT GGGGC               ATTGAATGTAAATTA  62 60
SH08_RS01495 NONE
SH08_RS01490 NONE
SH08_RS01485 NONE
SH08_RS01480 NONE
SH08_RS01475 NONE
        thiH  308503 ..  308528 - -14.1  -4.17762   CAGCCCTCAAAATAA         CAAAACCCACC TTAA GGTGGGTTTCG          CCAGAGAATTATCTC 100 409
SH08_RS01395 NONE
SH08_RS01390  292229 ..  292246 -  -8.4  -4.80417   CAGAAAAATAAGAAA             GGGGAG TATTCG CTCCCC              TGCAAATTATTTGCG 100 32
SH08_RS01345  280002 ..  280016 -  -4.2  -4.79752   GTGAACAAGAGAAAA               CCGCAA TTA TTCCGG               GAAATGTGAAGGACG  71 444
SH08_RS01330  277270 ..  277283 -  -4.5   -3.1552   GGCTATCTATGAAGA               TCACC CGTG GGCGA                ACCGCGAATGCGTAC  49 397
SH08_RS01305 NONE
SH08_RS01300  271500 ..  271515 -    -4  -3.56594   TCAAATGCTGCGAAA              TCGCTT CAGC AAACGA               ATAAATAGCAGGAAT  52 91
SH08_RS01295  268673 ..  268694 - -13.7  -4.41206   AAGTATTTCAGAAAA           CCCTCGCGC AAAA GCACGAGGG            TTTGCAGAAGAGGAA 100 43
SH08_RS01290  266712 ..  266756 - -17.3  -3.53811   CGGATGTGGCGTAAA CGCCTTATCCAGCCTACCG CCGCGAT CTGTAGGCCGGATAAGACG CGTCAAGCGTCGCAT 100 66
SH08_RS01285  265563 ..  265575 -  -9.1  -2.82834   TAGCGGATGAGGATA                TCCGC CGG GCGGA                TGTTGCTCTGTTGAT  63 181
SH08_RS01255 NONE
SH08_RS01250 NONE
        gldA  256167 ..  256185 - -11.7  -3.53343   AATTTTGCGTTCAAA             CTCCCGG ACAAG CCGGGAG             TTTGGAGTAGGTTAT  89 37
SH08_RS01240  256042 ..  256058 -  -7.9  -2.62983   GGGAGTTTCAGATTA              CTGGCAC AGA GTGCCGG              ATGCGGAGTGAACGC  60 1
SH08_RS01235  254830 ..  254844 -  -4.2  -4.25104   TCTCTTCGATGAAAA               GTGCCA TGC TGGCAA               TCCTCTCCGGCGTCA  62 486
SH08_RS01215  250163 ..  250180 -  -2.6     -2.54   AGCAGGTTACAACAT             CGAACC GGATCA GGTACG              TGTGGAATCGCTGGT  38 516
SH08_RS01200 NONE
SH08_RS01195  245512 ..  245525 -  -9.5  -5.02074   GGATTTCCGAAAAAA               GCGCC GCAC GGCGC                TTTTTTTGTGCCTGA 100 53
SH08_RS01185 NONE
SH08_RS01180  241503 ..  241516 -  -5.2  -2.82987   GCAATAGCGACCATA               GCGG GAGAAA CCGC                AGGCAGATTTCGTTG  50 207
SH08_RS01175  240590 ..  240609 - -13.6  -4.05991   AATACAGAGTACAAA            CCCCGTAC AAAA GTACGGGG             CATAATGCAATTATA 100 63
SH08_RS01170 NONE
        hslU  238635 ..  238652 -  -9.1  -5.06816   ACGCGCCAATAAAAA             TGGGGCC TTTC AGCCCCA              TCAAACAATGATGAA 100 56
SH08_RS01160  237665 ..  237679 -  -5.8  -3.08032   CTGTTGGCAAAATCA               TCAATT GTT AATTGA               TATTTGTCAGTTATG  55 36
SH08_RS01155  237089 ..  237104 - -10.4  -5.31456   GTAACGCAGAAAAAA              GGCACC TTGC GGTGCC               TTTCTTATCATTCAA 100 33
SH08_RS01145 NONE
        glpK NONE
SH08_RS01135  232794 ..  232815 - -13.1   -5.7946   CTCCGAACAAAAAAA           TTCCAGTCC CGAA GGACTGGAA            GGCTCAATCGATCAA 100 46
SH08_RS01130  231730 ..  231752 - -10.8  -3.41024   CCCTGCAACAGAAGA           TATTCTTCAA TTG TTGAAGAATA           AGTCGGATAACAAGC  76 266
SH08_RS01110  229811 ..  229831 -  -5.4  -3.41962   GCGAATAAAGGAAGA           TGGCCGCCC CGCA GGGCAGC-A            GGTCTGTGAAACAGT  57 76
SH08_RS01105  228975 ..  228997 - -13.5   -3.6187   AGTTAAGGAAAGTAA           GTGCCGGAT ATGAA ATCCGGCAC           CTGTCAGACTTAAGC 100 35
SH08_RS01075 NONE
        cpxA  221787 ..  221801 -   -10  -3.30124   GTGTAGGCCTGATAA               GACGCT ATC AGCGTC               GCATCAGGCATCCTG  76 93
SH08_RS01055  219434 ..  219448 -  -5.6   -4.6902   GCAGAATTTGAAAAA               GCGGCA GCT TCCCGC               TTTGGTTCCGGCTGG  75 315
SH08_RS01045  217236 ..  217262 - -10.1  -3.05596   GATTCCGGGATTTAA         CGCCAGCGCAG GGCAA CCACACTGGCG         CTTAGGTAGCATGGG  69 521
        rhaB NONE
SH08_RS01020  212597 ..  212643 - -14.3  -2.57931   CGTAGGCCGGATAAG GCGCTCGCGCCGCATCCGGCA ATCAA TGCCTGATGCGACGCTGTCGC GTCTTATCAGGCCTA  95 372
SH08_RS01015 NONE
SH08_RS01010  211359 ..  211382 -   -11  -2.86093   CGAAATTTAAAATAT          TGTGCCGGAG GCAT CTCTGGCACA           TTGGGCAATTACGGC  77 34
SH08_RS01005 NONE
SH08_RS01000 NONE
SH08_RS00995 NONE
SH08_RS00990  206343 ..  206373 -   -14  -2.97475   TTTTTGATGATAAAT       GCAGTGTCGGATGC GGC GCATCCGACACAGT       TCACCCCTTGTGAAG 100 26
SH08_RS00975 NONE
SH08_RS00970 NONE
SH08_RS00965 NONE
SH08_RS00960 NONE
SH08_RS00955  198455 ..  198467 -  -4.7  -3.62864   TAAATTGAGGCCAAA                CCGGC ACT GGCGG                CATAGCTTGAGGTGG  57 124
SH08_RS00950  198247 ..  198258 -    -3  -5.09426   GGTAATGGGAAAAAA                TGAT GTCA ATCA                 GATTGCTGACAACGT  75 19
SH08_RS00905 NONE
SH08_RS00900 NONE
SH08_RS00895  188664 ..  188692 - -12.6  -2.61274   GGCACCTTAATTAAC       GACATACAGCCTC CCGT GAGGCTG-ATGTC        AAACCCAAAAACTGC  88 115
SH08_RS00890  187630 ..  187640 -  -2.6  -3.01857   CATAAAACTGATATA                 TAAA AAC TTTA                 CAGAAGCTGAGCTGT  43 127
SH08_RS00885 NONE
SH08_RS00880  184049 ..  184062 -  -9.5  -3.30619   AATCACTCCTTATAA               CGCCC CGCA GGGCG                TCGTTTATTATTATT  74 39
SH08_RS00875  182586 ..  182600 -    -7  -2.64472   CATTTTTTAAACGTA               GGGAGG CCG CCACCC               ACCAGGATGGAAATA  56 55
        ompL  181784 ..  181808 - -11.5  -3.37612   CTGAAGCTTAATTAA          TGGCCGGAT GTGCTTA ATCCGGCCA          ACGAAAACCGTATCA  86 87
SH08_RS00845 NONE
        glnA  174701 ..  174718 -    -7  -5.28176   TTGACGGAGAAAAAA             GCCCAT GCAGAG ATGGGC              TACAGATAGCTGACA  89 199
        glnL NONE
        glnG  172128 ..  172151 -  -3.1   -3.5947   AATCTTTACACACAA          GCTGTGAAT CACTCC ATCCCCAGC           TCTTTTAACTTACGC  51 10
SH08_RS00825  171811 ..  171864 - -16.1  -2.57931   TGTAGGCCGGATAAG GCGTTTA-CGCCGCATCAGGCATC TGAGCAT GATGCCTGATGCGGCGCTGGTCGC GTCTTATCAGGCCTA 100 75
SH08_RS00810  168355 ..  168381 -  -7.2  -2.55392   AATCTATTGAATTTA         CGGGCCGGATAC GCC ACATCCGGCACA         AGCATTAAGGCAAGA  58 44
SH08_RS00800  164888 ..  164898 -  -8.2   -3.9122   CAGTGCGCTAAAGAA                 GCGC AAG GCGC                 AGATTTTAGCAGAAA  77 116
SH08_RS00795  163901 ..  163934 -   -14  -3.73042   TTGTTCATTAAAATA     CTCACTCGCCTCTG CTCATT CAGAGGCGAGTAAA      ACTTACTTATTCTGA 100 28
        mobA NONE
SH08_RS00765  159130 ..  159163 -  -7.3  -5.60993   TGGCGCAGAAAAAAA     TGCCGGATGCGACGC TGGC GCGTCTTATCCAGCC      TACTCTTGCTTATCC 100 35
        fadB NONE
        fadA  145508 ..  145526 -  -9.5  -5.76633   TGAGATATAAAAAAA             CCCGCCC CTGAC AGGCGGG             AAGAACGGCAACTAA 100 375
        rfaH  142541 ..  142554 -  -4.5  -2.52623   TGGCGTGGAGAAGAT               GCC-GC ATG GCTGGC               TGCCACCACGGATGC  44 71
SH08_RS00645  133590 ..  133610 - -16.9  -3.92659   GGGGTAAAATCCAAA            CCGGGTGGT AAT ACCACCCGG            TCTTTTCTCATTACA 100 36
SH08_RS00635  129932 ..  129950 -  -2.3  -4.41241   GAAATGCGCAGAAAA             TGCCGCA AACCA CGCTGCA             ATGGGGCATTCTGGT  60 205
        rhtB  126668 ..  126697 - -14.3  -3.25823   GCGTCTTCAGAGTAA       GTCGGATAAGGCG TTTA CGCCGCATCCGAC        ATTATTTTTCACGCA 100 34
SH08_RS00595  122474 ..  122486 -  -4.8  -3.06261   TTTTAATTGGTAACA                GCAG TTTAC CTGC                TTTTATGTCTTCAAC  50 36
SH08_RS00590  121504 ..  121529 -  -8.3  -3.07043   GTCAGCATGGCAATA         TGCCCACTCTC ATGC AAGAGTCGGCA          TATTTTTTCAGAATA  67 51
SH08_RS00585 NONE
SH08_RS00580  120653 ..  120681 -  -7.4  -3.25177   TTGTAAAAAACGAGA        GCGGTGGCTTAG TCTGG CTAAGCCACCTG        TTATTCAAAGGCTCC  64 30
SH08_RS00565  118178 ..  118193 -    -6  -3.02263   AGAGTGTGTGGAAGA              GGTGCG CCTG CGCGCC               ACGGTAAGCCGCCCG  53 391
        cyaY  111971 ..  112000 - -11.5  -3.14211   ATTTTTCGTGATGAA       CGTGCCGGA-AAGC GAG GCTTATCCGGCATG       CAATCTTAGCGGAAA  84 31
        hemC NONE
        hemD NONE
SH08_RS00510 NONE
SH08_RS00505  104919 ..  104944 -    -6  -2.53164   TTATGTATCAGGAAG         GCCCCGGAGG TGCTTG CCTCCGGGTG          AGAAGGAACTACTGT  52 34
SH08_RS00500  102568 ..  102581 -  -6.7  -3.30124   CTGTAGGCTGGATAA               GATGC GTCA GCATC                GCATCCGGCAAAGGC  61 63
SH08_RS00385   82551 ..   82564 -  -5.3  -2.73364   CTTTCACCTGAATCA               CTTAC TACA GTAAG                CTCATCGGGATTCAT  49 93
SH08_RS00380   80786 ..   80801 - -10.4  -3.90922   ACGCTGTGTAAAGAA              CGCCGT CAGT ACGGCG               AACTGGTGCGCCCGG  81 236
SH08_RS00370   78184 ..   78200 - -13.7  -4.18802   ACATATATGGCAAAA              GCCCGGA AAA TCCGGGC              TTCGCAGGTCCCTCA 100 104
SH08_RS00365   77765 ..   77798 -  -9.7  -4.45083   GGGAGAGGGAGAAAA     CACTCAAGGCCTTCTC CTG GAGAAGGCCTTGC-TA     TTAGTTGCGGTACAG 100 26
SH08_RS00355   75150 ..   75177 -  -9.2  -4.65895   CGGGTTAGGGAAAAA        TGCCTGAT-AGCG CTT CGCTTATCAGGCC        TACCCGCGCGACAAC 100 42
SH08_RS00320   66698 ..   66710 -  -6.2  -5.15167   GACGATTAATAAAAA                GGGC GAAAT GCCC                TTTTTTTATGTCAGT  87 31
SH08_RS00310   64933 ..   64954 -  -8.7  -3.91196   CTGATACAGATTAAA           TCAGAACGC AGAA GCGGTCTGA            TGAAACAGAATTTGC  80 466
SH08_RS00275 NONE
SH08_RS00270   57423 ..   57436 -  -4.5  -2.60079   CCATCGGATAACCCA               GCCGA CCCT TCAGC                AACAACGATTACAAC  45 41
SH08_RS00230 NONE
SH08_RS00225   46282 ..   46300 - -10.2  -2.71712   GCTGCGCGGTGAAAT             GCCGCAGA CCA TCGGCGGC             GGTATCGGCCAGTCT  67 144
SH08_RS00215   44727 ..   44749 -  -8.5  -2.92102   ATATCTGCCATAAAC          CGCCAC-CTT TATT AAGAGTGGCG           TATTGTACGCTGTGA  65 88
SH08_RS00210   44194 ..   44208 -  -7.2  -2.66977   CACAACTCAAAAACT               GAACAA CAG TTGTTC               TTTGGATAACTACCG  58 96
        gidA NONE
        gidB   41199 ..   41236 -  -5.2  -5.52384   TGCTTACCAAAAAAA  GCCACGTT-A-TCTTGTTG ATG CAA-AAGAGTGAACGTGGC  GTTAAATGTAACCAG  87 113
SH08_RS00195 NONE
SH08_RS00190 NONE
SH08_RS00185   39211 ..   39223 -  -3.3  -3.88331   TTTAAATAAAAGCAA                CGCTT ACT ACGCG                ACAGCGAACATCACG  53 19
SH08_RS00180 NONE
SH08_RS00175 NONE
SH08_RS00170 NONE
SH08_RS00165   35674 ..   35689 -  -2.4  -3.56366   AATAACCTGTTTAAA              CCGCGG CGGC CCCCGA               GACGATCTCGGTGAG  47 5
SH08_RS00160 NONE
        atpC   33776 ..   33797 - -12.3  -5.76949   CACGCGCAAAAAAAA           GCCAGCCTG TTTC CAGACTGGC            TTTTGTGCTTTTCAA 100 48
        glmU NONE
SH08_RS00145   29954 ..   29985 -  -9.6  -4.79352   TTAGCCATAACAAAA      GTCCAG-TATGCTTT TTC ACAGCATAACTGGAC      TGATTTCAGTTTACA 100 146
SH08_RS00140   28225 ..   28237 -  -4.9  -4.72556   TTAAAAATGACAAAA                TAGTT TGG AACTA                GATTTCACTTATCTG  71 237
SH08_RS00135   26764 ..   26775 -  -7.2  -2.82635   AGTTTTATTAGTACA                GCGG CTTA CCGC                 TACTGTCTTTAATAT  59 6
        pstC NONE
        pstA   24680 ..   24733 -  -4.3  -2.71364   GCACTTCGCTAATCA GGCTTACCGTAGGCCGGATCAGGCG TTCA CGCCGCATCCGGCAAAGTGTTAACC GTGTACAGAGTCAAA  45 112
SH08_RS00120 NONE
SH08_RS00115   23084 ..   23114 - -14.3  -3.63054   TAAAGTTATATATAA       CAAATCCCAATAA TTAAG TTATTGGGATTTG       TCTGGTGAATTATTT 100 35
SH08_RS00110   21924 ..   21941 -  -4.1  -2.91328   AACCTGAAAAAAACG             GCCTGAC GTGA ATCAAGC              AATTTTTTTCAGGTT  47 86
SH08_RS00105 NONE
SH08_RS00100   18528 ..   18553 - -12.7  -2.64572   GAAAGAATTAACGCA         TCGCATCCAGA CTGT TCTGAATGCGA          CGATAATTAAGGTGC  88 32
SH08_RS00095 NONE
SH08_RS00090 NONE
SH08_RS00085   14901 ..   14928 - -10.6  -3.39438   TAAATAATGAGAACA        GGCCGGA-GCGTA ATT CACACATCCGGCC        TTATTTCTTAAGCTT  78 39
SH08_RS00065   11498 ..   11522 - -12.2  -5.65927   GATCTAAATAAAAAA         CCCGCCA-GCA ATCA TGCATGGCGGG          TTTTTAACGCGCTAT 100 46
